Query 017814
Match_columns 365
No_of_seqs 317 out of 2335
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 03:40:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017814.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017814hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF08392 FAE1_CUT1_RppA: FAE1/ 100.0 4.6E-76 9.9E-81 561.6 21.1 283 80-364 4-286 (290)
2 PLN02192 3-ketoacyl-CoA syntha 100.0 1.5E-64 3.3E-69 517.2 29.4 307 49-363 72-378 (511)
3 PLN02932 3-ketoacyl-CoA syntha 100.0 8E-64 1.7E-68 509.8 26.8 306 50-363 39-350 (478)
4 PLN02854 3-ketoacyl-CoA syntha 100.0 4.6E-63 1E-67 507.3 26.1 307 50-364 85-391 (521)
5 PLN02377 3-ketoacyl-CoA syntha 100.0 1.6E-62 3.5E-67 502.8 27.0 305 50-362 69-373 (502)
6 PLN00415 3-ketoacyl-CoA syntha 100.0 2.6E-60 5.7E-65 479.9 28.0 290 66-363 47-336 (466)
7 PF00195 Chal_sti_synt_N: Chal 100.0 6.1E-40 1.3E-44 305.4 15.0 204 79-285 9-226 (226)
8 COG3424 BcsA Predicted naringe 100.0 3.3E-39 7.3E-44 306.3 19.0 253 85-348 2-262 (356)
9 PLN03172 chalcone synthase fam 100.0 5.7E-36 1.2E-40 300.7 25.3 259 83-348 15-288 (393)
10 PLN03168 chalcone synthase; Pr 100.0 6.5E-36 1.4E-40 300.0 25.6 259 83-348 14-287 (389)
11 PLN03173 chalcone synthase; Pr 100.0 2.2E-35 4.7E-40 296.4 24.6 259 83-348 15-288 (391)
12 PLN03170 chalcone synthase; Pr 100.0 5.8E-35 1.3E-39 294.2 22.5 257 83-347 19-291 (401)
13 PLN03169 chalcone synthase fam 100.0 3E-33 6.6E-38 280.9 25.4 260 80-347 17-291 (391)
14 cd00831 CHS_like Chalcone and 100.0 3.8E-33 8.3E-38 276.4 24.8 257 84-347 1-269 (361)
15 PLN03171 chalcone synthase-lik 100.0 4.9E-33 1.1E-37 280.1 25.9 257 82-345 20-291 (399)
16 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 6.9E-32 1.5E-36 263.4 14.4 188 83-314 2-192 (323)
17 PRK12880 3-oxoacyl-(acyl carri 100.0 3.5E-28 7.7E-33 241.2 20.5 177 80-286 3-180 (353)
18 PRK05963 3-oxoacyl-(acyl carri 99.9 1.4E-26 3E-31 226.1 20.4 168 84-286 3-171 (326)
19 PRK09258 3-oxoacyl-(acyl carri 99.9 1.9E-26 4.1E-31 226.0 19.9 181 83-286 4-197 (338)
20 PRK07204 3-oxoacyl-(acyl carri 99.9 7.5E-26 1.6E-30 221.2 22.9 170 83-286 3-174 (329)
21 PRK12879 3-oxoacyl-(acyl carri 99.9 1.8E-25 3.8E-30 217.7 21.7 170 83-286 3-173 (325)
22 PLN02326 3-oxoacyl-[acyl-carri 99.9 1.3E-25 2.9E-30 224.5 21.0 170 83-286 46-215 (379)
23 cd00830 KAS_III Ketoacyl-acyl 99.9 1.9E-25 4.2E-30 216.3 20.8 169 84-286 1-170 (320)
24 PRK06816 3-oxoacyl-(acyl carri 99.9 3E-25 6.4E-30 222.0 18.4 185 84-286 2-204 (378)
25 PRK07515 3-oxoacyl-(acyl carri 99.9 3.7E-24 8E-29 213.3 22.5 194 84-287 2-215 (372)
26 CHL00203 fabH 3-oxoacyl-acyl-c 99.9 4.9E-25 1.1E-29 215.7 15.6 169 84-286 2-170 (326)
27 PRK06840 hypothetical protein; 99.9 1.4E-24 3E-29 213.3 17.8 173 82-286 2-177 (339)
28 TIGR00747 fabH 3-oxoacyl-(acyl 99.9 5.9E-24 1.3E-28 206.6 20.1 170 84-287 2-172 (318)
29 PRK04262 hypothetical protein; 99.9 1.9E-24 4.1E-29 213.6 16.2 166 84-285 2-168 (347)
30 PRK09352 3-oxoacyl-(acyl carri 99.9 4.6E-23 9.9E-28 200.2 21.7 170 83-286 2-172 (319)
31 TIGR00748 HMG_CoA_syn_Arc hydr 99.9 5.6E-24 1.2E-28 210.5 14.5 166 84-285 1-167 (345)
32 cd00827 init_cond_enzymes "ini 99.9 5.7E-23 1.2E-27 199.3 13.7 166 84-286 1-167 (324)
33 TIGR01835 HMG-CoA-S_prok 3-hyd 99.9 8.1E-22 1.7E-26 197.5 17.4 163 85-285 1-164 (379)
34 PLN02577 hydroxymethylglutaryl 99.9 1E-21 2.3E-26 200.4 16.4 167 81-285 1-173 (459)
35 TIGR01833 HMG-CoA-S_euk 3-hydr 99.9 1.1E-20 2.4E-25 192.7 16.5 166 84-286 1-171 (454)
36 COG3425 PksG 3-hydroxy-3-methy 99.7 3.2E-16 6.8E-21 154.9 16.9 166 84-285 2-168 (377)
37 cd00327 cond_enzymes Condensin 99.7 3.2E-16 6.9E-21 146.5 14.7 107 161-286 7-114 (254)
38 PF01154 HMG_CoA_synt_N: Hydro 99.7 2.5E-16 5.5E-21 141.1 11.2 168 81-285 1-173 (174)
39 TIGR02845 spore_V_AD stage V s 99.6 5.9E-15 1.3E-19 143.7 15.9 117 160-286 49-173 (327)
40 cd00825 decarbox_cond_enzymes 99.5 1.9E-14 4.2E-19 139.7 9.9 123 161-286 11-173 (332)
41 PRK08304 stage V sporulation p 99.5 7.1E-14 1.5E-18 136.6 10.8 116 161-286 56-179 (337)
42 PRK06147 3-oxoacyl-(acyl carri 99.4 3.3E-12 7.2E-17 126.8 13.4 179 83-286 3-203 (348)
43 cd00834 KAS_I_II Beta-ketoacyl 99.3 1.1E-11 2.5E-16 124.0 14.0 184 83-286 1-243 (406)
44 cd00751 thiolase Thiolase are 99.3 8.5E-12 1.8E-16 125.4 9.3 94 160-254 21-115 (386)
45 PF08545 ACP_syn_III: 3-Oxoacy 99.3 9.4E-12 2E-16 98.1 6.9 65 216-285 1-65 (80)
46 PRK05656 acetyl-CoA acetyltran 99.3 2.4E-11 5.2E-16 122.6 10.8 95 160-255 25-120 (393)
47 TIGR01930 AcCoA-C-Actrans acet 99.3 2.2E-11 4.7E-16 122.6 10.2 95 159-254 19-114 (386)
48 PRK07108 acetyl-CoA acetyltran 99.2 2.5E-11 5.4E-16 122.5 10.2 94 160-254 26-121 (392)
49 PRK06205 acetyl-CoA acetyltran 99.2 2.3E-11 5E-16 123.1 9.7 94 160-254 25-119 (404)
50 PRK08235 acetyl-CoA acetyltran 99.2 3.6E-11 7.8E-16 121.4 10.0 94 160-254 25-119 (393)
51 smart00825 PKS_KS Beta-ketoacy 99.2 1.3E-10 2.7E-15 117.5 13.5 121 159-286 85-247 (424)
52 PRK09051 beta-ketothiolase; Pr 99.2 5.2E-11 1.1E-15 120.3 10.6 94 160-254 26-121 (394)
53 PRK08242 acetyl-CoA acetyltran 99.2 1.1E-10 2.3E-15 118.4 10.6 94 160-254 27-122 (402)
54 PRK09052 acetyl-CoA acetyltran 99.2 9.9E-11 2.1E-15 118.5 10.2 94 160-254 30-126 (399)
55 PRK12404 stage V sporulation p 99.2 7.6E-10 1.7E-14 108.0 15.0 118 159-285 52-176 (334)
56 PRK08170 acetyl-CoA acetyltran 99.1 1.5E-10 3.2E-15 118.1 10.4 95 160-255 26-121 (426)
57 PF00108 Thiolase_N: Thiolase, 99.1 1.6E-10 3.4E-15 110.8 9.9 95 160-255 25-120 (264)
58 PRK12578 acetyl-CoA acetyltran 99.1 1.5E-10 3.3E-15 116.2 10.3 93 160-254 20-113 (385)
59 PRK06059 lipid-transfer protei 99.1 1.6E-10 3.4E-15 116.8 9.9 92 161-254 23-116 (399)
60 cd00833 PKS polyketide synthas 99.1 5.9E-10 1.3E-14 112.1 13.9 123 159-287 85-248 (421)
61 PRK08313 acetyl-CoA acetyltran 99.1 2.2E-10 4.7E-15 115.4 10.0 93 160-254 23-117 (386)
62 PRK06954 acetyl-CoA acetyltran 99.1 2.6E-10 5.7E-15 115.3 10.0 93 161-254 31-124 (397)
63 cd00829 SCP-x_thiolase Thiolas 99.1 3E-10 6.5E-15 113.1 10.0 93 160-254 15-108 (375)
64 PRK05790 putative acyltransfer 99.1 3.7E-10 7.9E-15 113.8 10.5 94 160-254 25-119 (393)
65 PRK06065 acetyl-CoA acetyltran 99.1 5.7E-10 1.2E-14 112.7 10.4 92 160-253 28-121 (392)
66 cd00826 nondecarbox_cond_enzym 99.1 5.4E-10 1.2E-14 112.8 10.0 94 159-254 21-116 (393)
67 PRK07661 acetyl-CoA acetyltran 99.0 7.5E-10 1.6E-14 111.8 10.3 93 161-254 27-121 (391)
68 PRK07314 3-oxoacyl-(acyl carri 99.0 5E-09 1.1E-13 105.7 15.0 186 83-286 2-244 (411)
69 PLN02287 3-ketoacyl-CoA thiola 99.0 1.4E-09 2.9E-14 111.9 10.7 95 159-254 69-165 (452)
70 cd00828 elong_cond_enzymes "el 99.0 2.8E-09 6.1E-14 107.2 12.6 123 159-287 70-244 (407)
71 PRK07850 acetyl-CoA acetyltran 99.0 1.5E-09 3.3E-14 109.4 10.5 93 161-254 26-120 (387)
72 PRK13359 beta-ketoadipyl CoA t 99.0 1.6E-09 3.5E-14 109.7 10.7 95 160-255 25-122 (400)
73 PRK06633 acetyl-CoA acetyltran 99.0 8.4E-10 1.8E-14 111.5 8.5 94 160-254 26-120 (392)
74 PRK06064 acetyl-CoA acetyltran 99.0 1.5E-09 3.2E-14 109.2 10.2 93 160-254 21-116 (389)
75 PRK08963 fadI 3-ketoacyl-CoA t 99.0 1.1E-09 2.4E-14 111.7 9.4 94 160-254 28-122 (428)
76 TIGR03150 fabF beta-ketoacyl-a 99.0 3.8E-09 8.2E-14 106.1 12.8 186 83-286 1-243 (407)
77 PRK07851 acetyl-CoA acetyltran 99.0 1.9E-09 4.2E-14 109.3 10.5 94 160-255 26-122 (406)
78 PRK08131 acetyl-CoA acetyltran 99.0 2.1E-09 4.5E-14 109.0 10.6 94 160-254 25-120 (401)
79 PRK09050 beta-ketoadipyl CoA t 99.0 2.3E-09 5E-14 108.6 10.2 95 160-255 25-122 (401)
80 PRK06366 acetyl-CoA acetyltran 99.0 2.5E-09 5.4E-14 107.8 10.2 94 160-254 25-119 (388)
81 TIGR02446 FadI fatty oxidation 99.0 2E-09 4.2E-14 110.1 9.0 94 160-254 30-124 (430)
82 TIGR02430 pcaF beta-ketoadipyl 99.0 2.9E-09 6.4E-14 107.8 10.1 94 160-254 24-120 (400)
83 PLN02644 acetyl-CoA C-acetyltr 98.9 4.6E-09 1E-13 106.1 10.6 94 160-254 24-118 (394)
84 PRK06501 3-oxoacyl-(acyl carri 98.9 1.8E-08 3.9E-13 102.7 14.8 183 83-286 11-257 (425)
85 PRK07516 acetyl-CoA acetyltran 98.9 4.9E-09 1.1E-13 105.6 9.9 93 160-254 21-116 (389)
86 PRK06504 acetyl-CoA acetyltran 98.9 5.9E-09 1.3E-13 105.3 10.4 94 160-254 25-120 (390)
87 PRK06158 thiolase; Provisional 98.9 4E-09 8.6E-14 106.2 9.0 88 161-253 28-116 (384)
88 PRK08439 3-oxoacyl-(acyl carri 98.9 1.6E-08 3.6E-13 102.3 13.3 184 83-286 2-244 (406)
89 PTZ00455 3-ketoacyl-CoA thiola 98.9 7.3E-09 1.6E-13 106.1 10.7 94 160-254 47-151 (438)
90 PF00109 ketoacyl-synt: Beta-k 98.9 9E-09 2E-13 96.5 10.4 122 158-284 84-251 (254)
91 PRK06289 acetyl-CoA acetyltran 98.9 5.1E-09 1.1E-13 106.0 9.3 91 160-254 25-121 (403)
92 PRK06157 acetyl-CoA acetyltran 98.9 7.3E-09 1.6E-13 104.8 10.0 92 161-254 27-119 (398)
93 PRK06445 acetyl-CoA acetyltran 98.9 5.7E-09 1.2E-13 105.4 9.1 92 160-254 31-126 (394)
94 PRK08947 fadA 3-ketoacyl-CoA t 98.8 9.8E-09 2.1E-13 103.6 9.4 93 161-254 27-122 (387)
95 PRK07103 polyketide beta-ketoa 98.8 8.5E-08 1.8E-12 97.3 16.2 120 160-286 79-251 (410)
96 PRK06365 acetyl-CoA acetyltran 98.8 1.3E-08 2.8E-13 104.1 9.8 92 161-254 37-130 (430)
97 PRK08256 lipid-transfer protei 98.8 1.6E-08 3.6E-13 101.9 9.2 90 161-254 22-111 (391)
98 TIGR02445 fadA fatty oxidation 98.8 1.3E-08 2.9E-13 102.6 8.0 94 160-254 24-120 (385)
99 PRK06333 3-oxoacyl-(acyl carri 98.8 1.1E-07 2.3E-12 96.6 14.4 187 83-286 4-256 (424)
100 PRK09268 acetyl-CoA acetyltran 98.8 3E-08 6.4E-13 101.3 10.2 94 160-254 30-124 (427)
101 PRK06025 acetyl-CoA acetyltran 98.7 5.3E-08 1.2E-12 99.0 10.6 95 160-255 28-124 (417)
102 PRK08722 3-oxoacyl-(acyl carri 98.7 6E-07 1.3E-11 91.4 18.0 187 83-287 4-247 (414)
103 PRK07801 acetyl-CoA acetyltran 98.7 4.5E-08 9.7E-13 98.5 9.6 94 160-254 25-120 (382)
104 PLN02836 3-oxoacyl-[acyl-carri 98.7 2.9E-07 6.3E-12 94.2 14.5 120 160-286 92-267 (437)
105 PLN02787 3-oxoacyl-[acyl-carri 98.6 6.2E-07 1.4E-11 94.2 15.7 186 83-286 129-373 (540)
106 cd00832 CLF Chain-length facto 98.6 5.5E-07 1.2E-11 91.2 14.2 186 83-287 1-242 (399)
107 PRK09116 3-oxoacyl-(acyl carri 98.6 4.2E-07 9.1E-12 92.3 12.9 187 83-286 2-245 (405)
108 PRK08142 acetyl-CoA acetyltran 98.6 1.3E-07 2.8E-12 95.6 9.0 89 161-254 25-113 (388)
109 KOG1393 Hydroxymethylglutaryl- 98.6 2.8E-07 6.1E-12 91.1 11.0 172 78-286 5-181 (462)
110 PRK09185 3-oxoacyl-(acyl carri 98.6 7.5E-07 1.6E-11 89.9 14.5 81 197-284 137-233 (392)
111 PRK07967 3-oxoacyl-(acyl carri 98.6 3E-07 6.5E-12 93.4 11.0 184 83-286 2-244 (406)
112 PRK06519 3-oxoacyl-(acyl carri 98.6 1.5E-06 3.3E-11 88.1 16.0 190 80-287 3-256 (398)
113 PRK08257 acetyl-CoA acetyltran 98.5 3.8E-07 8.3E-12 95.0 10.8 93 160-254 26-120 (498)
114 PRK07910 3-oxoacyl-(acyl carri 98.5 3E-06 6.4E-11 86.5 16.4 188 83-286 12-254 (418)
115 PRK06690 acetyl-CoA acetyltran 98.5 4.8E-07 1E-11 90.6 9.6 89 161-254 25-113 (361)
116 PRK05952 3-oxoacyl-(acyl carri 98.5 1.5E-06 3.3E-11 87.6 13.2 169 83-286 2-222 (381)
117 PTZ00050 3-oxoacyl-acyl carrie 98.5 6.5E-07 1.4E-11 91.2 9.7 120 160-286 76-251 (421)
118 PRK07855 lipid-transfer protei 98.4 8.1E-07 1.8E-11 89.7 9.4 85 161-250 24-108 (386)
119 PRK06066 acetyl-CoA acetyltran 98.4 1.6E-06 3.5E-11 87.5 10.5 90 160-254 24-116 (385)
120 PRK14691 3-oxoacyl-(acyl carri 98.4 3.7E-06 8.1E-11 83.7 12.1 119 161-286 4-174 (342)
121 KOG1390 Acetyl-CoA acetyltrans 98.2 2.9E-06 6.2E-11 82.5 6.7 94 160-254 29-123 (396)
122 COG0183 PaaJ Acetyl-CoA acetyl 98.2 5.4E-06 1.2E-10 84.0 9.0 94 161-255 27-124 (392)
123 COG3321 Polyketide synthase mo 98.2 1.1E-05 2.5E-10 90.8 12.3 190 84-285 5-250 (1061)
124 TIGR02813 omega_3_PfaA polyket 98.2 2.5E-05 5.3E-10 94.4 14.8 192 81-285 5-282 (2582)
125 PRK07937 lipid-transfer protei 98.0 2.7E-05 5.9E-10 77.8 9.8 89 162-254 25-114 (352)
126 PF07451 SpoVAD: Stage V sporu 98.0 0.00021 4.6E-09 69.5 15.0 120 159-287 49-175 (329)
127 COG0304 FabB 3-oxoacyl-(acyl-c 97.9 0.00027 5.9E-09 72.1 13.9 179 83-288 3-246 (412)
128 KOG1406 Peroxisomal 3-ketoacyl 97.8 2.1E-05 4.6E-10 75.0 4.8 88 163-254 31-118 (408)
129 KOG1391 Acetyl-CoA acetyltrans 97.2 0.00061 1.3E-08 65.0 5.7 92 161-255 28-123 (396)
130 KOG1389 3-oxoacyl CoA thiolase 97.0 0.0015 3.2E-08 63.9 6.1 95 162-257 62-157 (435)
131 KOG1394 3-oxoacyl-(acyl-carrie 96.3 0.014 3.1E-07 58.1 8.0 124 156-286 89-269 (440)
132 PF08541 ACP_syn_III_C: 3-Oxoa 96.0 0.0071 1.5E-07 48.0 3.7 75 173-251 1-78 (90)
133 KOG1392 Acetyl-CoA acetyltrans 95.5 0.01 2.2E-07 57.6 3.2 93 161-254 66-159 (465)
134 PRK06816 3-oxoacyl-(acyl carri 95.5 0.06 1.3E-06 54.2 8.9 92 159-254 268-367 (378)
135 TIGR00748 HMG_CoA_syn_Arc hydr 95.5 0.046 1E-06 54.4 7.8 83 161-249 206-293 (345)
136 PRK09258 3-oxoacyl-(acyl carri 95.2 0.057 1.2E-06 53.0 7.4 91 157-251 233-326 (338)
137 PRK05963 3-oxoacyl-(acyl carri 94.9 0.055 1.2E-06 52.9 6.3 88 159-250 223-313 (326)
138 PRK07204 3-oxoacyl-(acyl carri 94.7 0.066 1.4E-06 52.4 6.3 85 159-250 226-316 (329)
139 TIGR00747 fabH 3-oxoacyl-(acyl 94.4 0.12 2.5E-06 50.3 7.0 88 159-250 215-305 (318)
140 PRK06840 hypothetical protein; 94.2 0.13 2.8E-06 50.6 7.0 81 163-250 237-322 (339)
141 PLN02326 3-oxoacyl-[acyl-carri 94.1 0.12 2.7E-06 52.0 6.7 88 159-250 276-366 (379)
142 cd00825 decarbox_cond_enzymes 93.9 0.17 3.8E-06 49.0 7.2 78 163-240 205-286 (332)
143 PRK09352 3-oxoacyl-(acyl carri 93.9 0.12 2.7E-06 50.1 6.1 87 160-250 216-305 (319)
144 PRK04262 hypothetical protein; 93.7 0.13 2.9E-06 50.9 6.1 81 163-249 209-294 (347)
145 CHL00203 fabH 3-oxoacyl-acyl-c 93.6 0.12 2.7E-06 50.6 5.5 84 163-250 226-312 (326)
146 cd00830 KAS_III Ketoacyl-acyl 93.5 0.11 2.4E-06 50.2 5.2 88 159-250 219-309 (320)
147 cd00327 cond_enzymes Condensin 93.3 0.33 7.2E-06 45.0 7.7 87 163-249 145-242 (254)
148 PRK12879 3-oxoacyl-(acyl carri 93.2 0.26 5.7E-06 47.9 7.2 84 160-250 222-311 (325)
149 PRK06025 acetyl-CoA acetyltran 93.1 0.28 6E-06 50.4 7.4 91 166-283 318-416 (417)
150 PRK07515 3-oxoacyl-(acyl carri 92.6 0.33 7.1E-06 48.6 7.1 86 159-250 267-358 (372)
151 PF02797 Chal_sti_synt_C: Chal 92.4 0.14 3E-06 45.3 3.6 48 298-348 4-51 (151)
152 PRK06147 3-oxoacyl-(acyl carri 92.1 0.28 6E-06 49.0 5.7 88 163-250 234-329 (348)
153 PF13723 Ketoacyl-synt_2: Beta 91.6 2.8 6.1E-05 39.4 11.6 115 160-286 33-172 (218)
154 cd00831 CHS_like Chalcone and 90.2 0.67 1.4E-05 46.1 6.4 88 159-250 255-350 (361)
155 PRK05656 acetyl-CoA acetyltran 88.9 0.72 1.6E-05 46.8 5.5 67 165-238 293-364 (393)
156 PRK08242 acetyl-CoA acetyltran 88.6 0.86 1.9E-05 46.5 5.9 65 166-237 303-372 (402)
157 KOG1202 Animal-type fatty acid 88.2 0.14 3.1E-06 57.9 -0.1 194 82-288 10-249 (2376)
158 cd00827 init_cond_enzymes "ini 87.1 1.8 3.9E-05 41.8 6.9 90 157-251 217-314 (324)
159 PRK12880 3-oxoacyl-(acyl carri 86.8 1.2 2.6E-05 44.5 5.7 70 160-233 239-312 (353)
160 COG0332 FabH 3-oxoacyl-[acyl-c 86.6 1.1 2.4E-05 44.5 5.2 88 157-249 217-308 (323)
161 COG0533 QRI7 Metal-dependent p 86.3 2.1 4.6E-05 42.8 6.9 87 160-253 49-138 (342)
162 KOG2708 Predicted metalloprote 86.2 2.3 5E-05 40.5 6.7 117 163-286 51-175 (336)
163 COG3425 PksG 3-hydroxy-3-methy 85.7 3.4 7.4E-05 41.9 8.1 85 160-249 206-296 (377)
164 PRK13359 beta-ketoadipyl CoA t 85.2 1.8 3.9E-05 44.1 6.1 52 166-222 299-350 (400)
165 PRK06445 acetyl-CoA acetyltran 85.0 1.6 3.5E-05 44.2 5.6 50 165-220 294-343 (394)
166 PRK08257 acetyl-CoA acetyltran 84.8 2.4 5.3E-05 44.5 6.9 80 165-249 294-382 (498)
167 PF02803 Thiolase_C: Thiolase, 84.3 1.5 3.3E-05 37.4 4.3 74 166-246 25-106 (123)
168 PRK09050 beta-ketoadipyl CoA t 84.1 2.3 5.1E-05 43.3 6.3 52 166-222 300-351 (401)
169 PRK06954 acetyl-CoA acetyltran 84.1 1.3 2.8E-05 45.0 4.4 52 165-223 297-348 (397)
170 PRK06690 acetyl-CoA acetyltran 84.0 2.7 5.9E-05 42.3 6.6 69 164-238 259-335 (361)
171 PRK07661 acetyl-CoA acetyltran 83.7 1.4 3.1E-05 44.7 4.5 51 164-220 290-340 (391)
172 cd00829 SCP-x_thiolase Thiolas 83.6 4 8.8E-05 40.6 7.7 46 163-212 251-296 (375)
173 PLN03169 chalcone synthase fam 83.3 3.3 7.2E-05 42.0 7.0 89 160-250 278-375 (391)
174 PRK06366 acetyl-CoA acetyltran 83.0 3.3 7.3E-05 41.9 6.9 68 165-238 287-362 (388)
175 PRK07850 acetyl-CoA acetyltran 83.0 3.7 8.1E-05 41.6 7.2 51 164-220 286-336 (387)
176 PF02801 Ketoacyl-synt_C: Beta 83.0 0.22 4.9E-06 41.7 -1.4 77 164-240 26-110 (119)
177 PRK09052 acetyl-CoA acetyltran 82.8 2 4.3E-05 43.8 5.1 51 164-220 298-348 (399)
178 PRK06519 3-oxoacyl-(acyl carri 81.6 4.1 8.9E-05 41.6 6.9 75 164-240 281-357 (398)
179 TIGR01930 AcCoA-C-Actrans acet 81.5 3.2 6.9E-05 41.9 6.1 50 165-220 288-337 (386)
180 PRK06205 acetyl-CoA acetyltran 81.2 3.8 8.3E-05 41.7 6.6 55 165-224 300-355 (404)
181 PLN02287 3-ketoacyl-CoA thiola 81.2 3 6.6E-05 43.3 5.9 50 165-220 333-382 (452)
182 PRK09051 beta-ketothiolase; Pr 81.2 4.4 9.6E-05 41.2 7.0 67 165-238 294-365 (394)
183 PRK08947 fadA 3-ketoacyl-CoA t 80.9 3 6.5E-05 42.3 5.7 69 165-238 284-358 (387)
184 TIGR00329 gcp_kae1 metallohydr 80.8 5.2 0.00011 39.2 7.1 60 161-220 48-108 (305)
185 COG1214 Inactive homolog of me 80.7 5.1 0.00011 37.5 6.7 59 162-220 38-97 (220)
186 TIGR01835 HMG-CoA-S_prok 3-hyd 80.7 2.9 6.4E-05 42.1 5.5 90 159-249 201-303 (379)
187 TIGR02430 pcaF beta-ketoadipyl 79.1 3.9 8.5E-05 41.7 5.8 52 165-220 298-349 (400)
188 cd00834 KAS_I_II Beta-ketoacyl 79.0 3.1 6.6E-05 41.6 5.0 78 163-240 275-358 (406)
189 cd00828 elong_cond_enzymes "el 78.9 3.2 7E-05 41.7 5.1 78 163-240 274-357 (407)
190 TIGR03723 bact_gcp putative gl 78.6 6.4 0.00014 38.8 7.0 60 161-220 49-109 (314)
191 PRK09604 UGMP family protein; 77.8 4.4 9.5E-05 40.2 5.6 56 161-220 51-111 (332)
192 PRK07314 3-oxoacyl-(acyl carri 77.7 3.3 7.1E-05 41.8 4.8 76 165-240 278-359 (411)
193 COG0304 FabB 3-oxoacyl-(acyl-c 77.2 4 8.6E-05 42.0 5.2 70 164-233 277-353 (412)
194 PLN02787 3-oxoacyl-[acyl-carri 76.8 6 0.00013 42.1 6.5 76 165-240 407-487 (540)
195 TIGR03150 fabF beta-ketoacyl-a 76.6 4.4 9.5E-05 40.6 5.3 45 165-209 277-322 (407)
196 PRK09185 3-oxoacyl-(acyl carri 75.9 5.2 0.00011 40.4 5.7 76 165-240 262-340 (392)
197 PRK05790 putative acyltransfer 75.8 7 0.00015 39.4 6.6 43 165-211 293-335 (393)
198 PRK06064 acetyl-CoA acetyltran 75.5 8.1 0.00018 38.9 6.9 42 165-210 260-301 (389)
199 PRK14878 UGMP family protein; 75.5 7.1 0.00015 38.6 6.3 33 163-195 46-78 (323)
200 PRK07108 acetyl-CoA acetyltran 75.2 2.2 4.8E-05 43.4 2.7 67 165-238 292-363 (392)
201 PRK08235 acetyl-CoA acetyltran 75.0 6.1 0.00013 40.2 5.8 50 165-220 293-342 (393)
202 cd00832 CLF Chain-length facto 75.0 4.7 0.0001 40.9 5.1 77 163-240 270-351 (399)
203 PRK06504 acetyl-CoA acetyltran 74.8 9.3 0.0002 38.9 7.1 67 164-237 289-360 (390)
204 PRK07801 acetyl-CoA acetyltran 74.0 5.6 0.00012 40.1 5.3 66 166-238 283-353 (382)
205 PRK07516 acetyl-CoA acetyltran 73.7 6.6 0.00014 39.7 5.7 44 164-211 261-304 (389)
206 PRK07851 acetyl-CoA acetyltran 73.7 6 0.00013 40.4 5.5 43 165-211 305-347 (406)
207 PF00814 Peptidase_M22: Glycop 73.3 4.9 0.00011 38.7 4.5 70 160-235 28-98 (268)
208 PRK06289 acetyl-CoA acetyltran 73.0 14 0.0003 37.5 7.9 43 165-211 278-320 (403)
209 PTZ00340 O-sialoglycoprotein e 72.9 11 0.00024 37.8 7.0 58 162-220 50-109 (345)
210 cd00751 thiolase Thiolase are 72.0 7.4 0.00016 39.2 5.6 43 165-211 287-329 (386)
211 PRK06158 thiolase; Provisional 71.9 12 0.00026 37.7 7.2 43 165-211 256-298 (384)
212 PTZ00050 3-oxoacyl-acyl carrie 71.8 10 0.00022 38.7 6.7 78 163-240 283-368 (421)
213 TIGR02446 FadI fatty oxidation 71.7 19 0.00042 37.0 8.7 24 166-189 314-337 (430)
214 PRK05952 3-oxoacyl-(acyl carri 71.6 5.7 0.00012 40.2 4.7 76 163-240 254-334 (381)
215 cd00826 nondecarbox_cond_enzym 71.5 4.5 9.7E-05 41.1 3.9 43 165-211 271-313 (393)
216 PRK08256 lipid-transfer protei 70.9 12 0.00027 37.7 7.0 43 165-211 266-308 (391)
217 PRK08131 acetyl-CoA acetyltran 70.8 8.2 0.00018 39.4 5.6 53 165-222 298-350 (401)
218 PRK07937 lipid-transfer protei 70.4 15 0.00033 36.8 7.4 49 167-220 250-299 (352)
219 PRK12578 acetyl-CoA acetyltran 70.3 12 0.00026 37.7 6.7 43 165-211 259-301 (385)
220 PTZ00455 3-ketoacyl-CoA thiola 70.0 11 0.00025 38.9 6.5 43 165-211 311-353 (438)
221 PRK14691 3-oxoacyl-(acyl carri 70.0 10 0.00022 37.9 6.0 46 163-208 206-252 (342)
222 TIGR01796 CM_mono_aroH monofun 70.0 10 0.00022 32.3 5.0 63 161-225 18-81 (117)
223 PRK06501 3-oxoacyl-(acyl carri 69.9 6.1 0.00013 40.5 4.5 76 165-240 291-372 (425)
224 PRK06059 lipid-transfer protei 69.3 16 0.00035 37.0 7.4 42 166-211 276-317 (399)
225 TIGR03722 arch_KAE1 universal 68.9 11 0.00025 37.0 6.1 31 163-193 47-77 (322)
226 KOG2707 Predicted metalloprote 68.8 13 0.00028 37.5 6.3 55 162-220 83-142 (405)
227 PRK06333 3-oxoacyl-(acyl carri 68.6 7.4 0.00016 39.5 4.8 45 164-208 289-334 (424)
228 PLN03170 chalcone synthase; Pr 67.6 17 0.00037 37.1 7.2 71 160-234 278-354 (401)
229 TIGR03725 bact_YeaZ universal 67.5 8.8 0.00019 35.2 4.6 60 161-220 33-93 (202)
230 PRK08722 3-oxoacyl-(acyl carri 67.0 10 0.00022 38.7 5.5 77 164-240 279-362 (414)
231 TIGR02445 fadA fatty oxidation 66.9 23 0.0005 35.9 7.9 69 165-238 282-356 (385)
232 smart00825 PKS_KS Beta-ketoacy 66.0 17 0.00037 36.6 6.8 27 163-189 279-305 (424)
233 PLN02644 acetyl-CoA C-acetyltr 65.6 8 0.00017 39.2 4.3 65 166-237 294-363 (394)
234 PLN03173 chalcone synthase; Pr 65.2 18 0.0004 36.7 6.9 51 160-214 274-324 (391)
235 cd00833 PKS polyketide synthas 65.1 14 0.0003 37.1 5.9 78 163-240 279-365 (421)
236 PRK09116 3-oxoacyl-(acyl carri 64.5 9.4 0.0002 38.9 4.6 45 164-208 276-321 (405)
237 PRK07910 3-oxoacyl-(acyl carri 64.4 12 0.00026 38.3 5.4 45 164-208 287-332 (418)
238 PLN03171 chalcone synthase-lik 62.8 22 0.00049 36.2 7.0 87 159-250 275-381 (399)
239 PRK09605 bifunctional UGMP fam 62.1 21 0.00045 37.5 6.8 61 164-225 51-113 (535)
240 cd02185 AroH Chorismate mutase 61.9 21 0.00045 30.4 5.4 64 161-225 18-81 (117)
241 PLN02836 3-oxoacyl-[acyl-carri 61.5 14 0.00031 37.9 5.4 25 164-188 300-324 (437)
242 KOG1794 N-Acetylglucosamine ki 60.2 33 0.00071 33.9 7.1 117 161-285 45-165 (336)
243 PRK07855 lipid-transfer protei 59.8 37 0.00081 34.3 7.9 24 166-189 269-292 (386)
244 PF07736 CM_1: Chorismate muta 59.5 23 0.00049 30.2 5.2 59 160-222 17-78 (118)
245 PRK07103 polyketide beta-ketoa 54.9 26 0.00056 35.6 5.9 23 166-188 284-306 (410)
246 CHL00094 dnaK heat shock prote 53.8 27 0.0006 37.6 6.1 48 163-211 309-356 (621)
247 PRK09585 anmK anhydro-N-acetyl 53.1 39 0.00085 34.3 6.7 69 154-223 62-138 (365)
248 PRK13410 molecular chaperone D 53.0 37 0.00081 37.1 7.0 70 159-232 305-374 (668)
249 TIGR02350 prok_dnaK chaperone 52.6 34 0.00073 36.6 6.5 71 157-231 299-369 (595)
250 PRK06365 acetyl-CoA acetyltran 51.8 41 0.00089 34.6 6.8 69 165-238 295-386 (430)
251 PRK06066 acetyl-CoA acetyltran 51.4 39 0.00085 34.3 6.5 42 166-211 259-302 (385)
252 KOG1389 3-oxoacyl CoA thiolase 51.3 35 0.00075 34.1 5.7 48 167-220 324-371 (435)
253 PLN03172 chalcone synthase fam 51.1 41 0.0009 34.2 6.6 70 160-233 274-349 (393)
254 PRK05183 hscA chaperone protei 50.7 82 0.0018 34.0 9.1 68 160-231 306-373 (616)
255 TIGR01991 HscA Fe-S protein as 48.2 1E+02 0.0022 33.1 9.4 52 159-211 289-340 (599)
256 PRK08963 fadI 3-ketoacyl-CoA t 48.1 51 0.0011 33.8 6.8 25 165-189 311-335 (428)
257 PTZ00186 heat shock 70 kDa pre 48.1 64 0.0014 35.2 7.9 64 164-231 335-398 (657)
258 PRK13411 molecular chaperone D 47.9 43 0.00093 36.4 6.5 68 161-231 306-373 (653)
259 PLN03184 chloroplast Hsp70; Pr 46.9 59 0.0013 35.5 7.4 70 159-232 342-411 (673)
260 PRK09268 acetyl-CoA acetyltran 46.2 70 0.0015 32.9 7.4 26 164-189 310-335 (427)
261 PRK00290 dnaK molecular chaper 45.6 59 0.0013 35.1 7.1 69 159-231 303-371 (627)
262 PRK00768 nadE NAD synthetase; 45.5 3E+02 0.0064 26.8 13.0 73 197-281 89-181 (268)
263 PRK08170 acetyl-CoA acetyltran 45.4 50 0.0011 33.9 6.3 25 165-189 309-333 (426)
264 PRK08313 acetyl-CoA acetyltran 44.7 74 0.0016 32.1 7.3 45 163-211 255-301 (386)
265 PRK06633 acetyl-CoA acetyltran 44.4 27 0.00059 35.6 4.1 25 165-189 292-316 (392)
266 PTZ00009 heat shock 70 kDa pro 44.0 60 0.0013 35.3 6.9 65 165-232 315-379 (653)
267 PTZ00400 DnaK-type molecular c 42.8 53 0.0012 35.8 6.3 63 165-231 350-412 (663)
268 KOG1394 3-oxoacyl-(acyl-carrie 42.5 29 0.00063 35.2 3.8 46 163-208 301-347 (440)
269 PRK06157 acetyl-CoA acetyltran 42.4 77 0.0017 32.2 7.0 43 165-211 268-312 (398)
270 PRK12404 stage V sporulation p 42.4 87 0.0019 31.4 7.1 89 163-253 206-310 (334)
271 PLN02854 3-ketoacyl-CoA syntha 41.4 1E+02 0.0022 32.8 7.9 42 165-210 387-434 (521)
272 PF09663 Amido_AtzD_TrzD: Amid 39.4 98 0.0021 31.2 6.8 74 158-236 127-202 (365)
273 PRK08142 acetyl-CoA acetyltran 37.7 44 0.00095 33.9 4.4 42 164-209 256-297 (388)
274 PRK08304 stage V sporulation p 37.5 91 0.002 31.3 6.4 89 163-253 208-312 (337)
275 TIGR02813 omega_3_PfaA polyket 34.4 60 0.0013 41.1 5.5 75 166-240 318-401 (2582)
276 PLN03168 chalcone synthase; Pr 33.3 1.2E+02 0.0026 30.8 6.7 68 162-233 275-348 (389)
277 KOG1391 Acetyl-CoA acetyltrans 33.1 54 0.0012 32.0 3.9 49 166-220 296-344 (396)
278 TIGR02845 spore_V_AD stage V s 33.1 1.5E+02 0.0033 29.7 7.1 89 163-253 202-305 (327)
279 KOG1406 Peroxisomal 3-ketoacyl 32.4 44 0.00095 32.7 3.1 28 161-188 270-297 (408)
280 TIGR03285 methan_mark_14 putat 30.9 87 0.0019 31.9 5.0 34 156-189 60-93 (445)
281 PRK06065 acetyl-CoA acetyltran 30.9 1.8E+02 0.0039 29.5 7.6 24 166-189 265-290 (392)
282 TIGR00114 lumazine-synth 6,7-d 30.4 23 0.0005 30.9 0.8 47 158-206 11-57 (138)
283 PF07451 SpoVAD: Stage V sporu 30.1 42 0.00092 33.3 2.7 88 163-253 203-307 (329)
284 COG2377 Predicted molecular ch 30.0 1.3E+02 0.0029 30.5 6.2 95 154-251 64-171 (371)
285 TIGR02177 PorB_KorB 2-oxoacid: 29.2 2.3E+02 0.0049 27.8 7.6 21 163-183 10-30 (287)
286 PLN02404 6,7-dimethyl-8-ribity 29.1 27 0.00059 30.6 1.1 48 157-206 17-64 (141)
287 PF05883 Baculo_RING: Baculovi 29.1 40 0.00086 29.4 2.0 38 7-46 52-89 (134)
288 PF06924 DUF1281: Protein of u 29.0 55 0.0012 28.5 2.9 37 103-139 72-108 (134)
289 PF00012 HSP70: Hsp70 protein; 26.9 96 0.0021 32.7 5.0 69 159-231 305-373 (602)
290 PRK08439 3-oxoacyl-(acyl carri 26.0 2.3E+02 0.0051 28.6 7.4 76 163-240 274-355 (406)
291 COG0825 AccA Acetyl-CoA carbox 25.6 1.9E+02 0.0042 28.6 6.3 51 202-254 180-230 (317)
292 TIGR02714 amido_AtzD_TrzD ring 25.4 1.7E+02 0.0037 29.5 5.9 32 158-189 128-160 (366)
293 PRK12419 riboflavin synthase s 24.4 35 0.00076 30.6 0.9 48 157-206 20-67 (158)
294 PF12273 RCR: Chitin synthesis 23.2 86 0.0019 26.6 3.1 20 78-97 25-44 (130)
295 PRK01433 hscA chaperone protei 23.0 3.2E+02 0.007 29.5 8.0 67 159-231 287-353 (595)
296 PLN02666 5-oxoprolinase 23.0 1.7E+02 0.0037 34.6 6.3 75 158-237 464-538 (1275)
297 PF09269 DUF1967: Domain of un 22.9 59 0.0013 24.8 1.8 37 100-136 11-47 (69)
298 cd07018 S49_SppA_67K_type Sign 22.8 1.2E+02 0.0027 28.0 4.3 82 166-250 31-115 (222)
299 COG4401 AroH Chorismate mutase 22.5 2E+02 0.0044 24.4 5.0 63 163-226 22-84 (125)
300 PF06716 DUF1201: Protein of u 22.1 2.9E+02 0.0063 19.8 4.9 28 53-80 11-38 (54)
301 cd03765 proteasome_beta_bacter 22.0 1.3E+02 0.0029 28.4 4.4 33 158-190 167-199 (236)
302 COG0054 RibH Riboflavin syntha 21.8 86 0.0019 27.9 2.8 48 157-206 22-69 (152)
303 PHA02902 putative IMV membrane 21.5 2.9E+02 0.0063 21.1 5.2 20 57-76 7-26 (70)
304 PF15086 UPF0542: Uncharacteri 21.0 1.8E+02 0.0039 22.7 4.1 29 49-78 18-46 (74)
305 PF07620 SLEI_Leptospira: SLEI 21.0 58 0.0013 18.1 1.0 11 27-37 3-13 (16)
306 PF13268 DUF4059: Protein of u 20.6 2.5E+02 0.0054 21.9 4.7 29 54-82 10-38 (72)
No 1
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=100.00 E-value=4.6e-76 Score=561.58 Aligned_cols=283 Identities=44% Similarity=0.741 Sum_probs=277.1
Q ss_pred cCCCCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhh
Q 017814 80 KRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFS 159 (365)
Q Consensus 80 ~r~~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e 159 (365)
+||++|||++++||.|++. +|++.++++++++..+.+++++++|++||+++|||+++||+|+.....||+ .+++++++
T Consensus 4 ~R~r~VYLvDfac~kP~~~-~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~-~s~~~a~~ 81 (290)
T PF08392_consen 4 RRPRPVYLVDFACYKPPDE-LRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPD-PSLAAARE 81 (290)
T ss_pred CCCCCEEEEeeeecCCCcc-cccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCc-ccHHHHHH
Confidence 8999999999999999999 999999999999999999999999999999999999999999988887775 59999999
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHc
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~a 239 (365)
|++.++..|++++|+++|++|+|||.||+|||.++++||++++|++++||++|+.++++.||||++|+.+|++|+++++.
T Consensus 82 Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~ 161 (290)
T PF08392_consen 82 EAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQA 161 (290)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeecccccccceeEEeeeeeeeecCCCcchhhhcccccc
Q 017814 240 YKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQ 319 (365)
Q Consensus 240 g~~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~~~~~~~~~l~~~vrt~~~~d~~~~~~~~~~~~~ 319 (365)
+|+.+||||++|.+|.+||.|+||+++++||||+|||||+|||+++++++++||+|.|+||||.|++|++|+|++|+||+
T Consensus 162 ~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~eD~ 241 (290)
T PF08392_consen 162 HPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEEDE 241 (290)
T ss_pred CCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCceeeEEEeEcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcceecHHHHHHHHHHHHHhHHhhcCcccccccceeeecccC
Q 017814 320 QGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRVEPESW 364 (365)
Q Consensus 320 ~G~~g~~Lsk~vp~~~~~~L~~~i~~L~p~vlp~~e~~~~~~~~~ 364 (365)
+|..|+.|||++|.+++++||.|+++|||+|||+|||++|+++++
T Consensus 242 ~g~~Gv~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~~~~~ 286 (290)
T PF08392_consen 242 EGIVGVSLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFAASFI 286 (290)
T ss_pred CCceEEEEecchHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998864
No 2
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.5e-64 Score=517.21 Aligned_cols=307 Identities=36% Similarity=0.630 Sum_probs=291.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHH
Q 017814 49 LSYFFFSFIMALLYLLPLFYIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKN 128 (365)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri 128 (365)
.+...+++++.++++++|++++|++ +||++||+++++||+|++. +|++.+.++++.+..+.+++++++|++|+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~vylvd~~c~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 144 (511)
T PLN02192 72 HLKFNLISVILCSTLLVFLSTLYFL------TRPRPVYLVDFSCYKPDDS-RKCTRKIFMDRSKLTGSFTEENLEFQRKI 144 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH------cCCCcEEEEeeeeecCCcc-ccccHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 3444578888898999999999999 9999999999999999999 99999999999999999999999999999
Q ss_pred HHHhCcceEEeecCCCcCCCCCCcchHHhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcC
Q 017814 129 MVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYN 208 (365)
Q Consensus 129 ~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LG 208 (365)
++|||++++||+|+..++.||+ ++|+++++|+++++++|+++||+++|++|+|||+||++||+++++|+++++|+++||
T Consensus 145 ~~~sglg~~t~~p~~~~~~~~~-~~~~~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lG 223 (511)
T PLN02192 145 LERSGLGESTYLPEAVLNVPPN-PCMAEARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYK 223 (511)
T ss_pred HHhcCCCCcccCChhhccCCCC-ccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhC
Confidence 9999999999999999988875 499999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeeccccc
Q 017814 209 LRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALK 288 (365)
Q Consensus 209 L~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~~~ 288 (365)
+++++.+||++||||+||+.||++|+++++++++++||||++|.+|.+||.++||+++++|+||||||||+||++++.++
T Consensus 224 lr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~ 303 (511)
T PLN02192 224 LRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDR 303 (511)
T ss_pred CCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEecccccc
Confidence 99889999999999999999999999999999999999999999999999999999999999999999999999987666
Q ss_pred ccceeEEeeeeeeeecCCCcchhhhcccccccCCCcceecHHHHHHHHHHHHHhHHhhcCcccccccceeeeccc
Q 017814 289 HKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRVEPES 363 (365)
Q Consensus 289 ~~~~~~l~~~vrt~~~~d~~~~~~~~~~~~~~G~~g~~Lsk~vp~~~~~~L~~~i~~L~p~vlp~~e~~~~~~~~ 363 (365)
++++|+++|++++|.++|++.|+|+++++|++|..|+.|||++|.+++++++.++++++|+++|.+||++|+.+.
T Consensus 304 ~~~k~~L~~~vrt~~~~dd~~~~~v~~~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m 378 (511)
T PLN02192 304 RRSKYQLVHTVRTHKGADDKCFACVTQEEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATL 378 (511)
T ss_pred ccccceeeeeEEEEecCChhhccceecccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEE
Confidence 668999999999999999999999999999999999999999999999999999999999999999999987654
No 3
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=8e-64 Score=509.82 Aligned_cols=306 Identities=36% Similarity=0.586 Sum_probs=286.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhc---ccCChhH---HH
Q 017814 50 SYFFFSFIMALLYLLPLFYIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRN---KKLGLEE---YR 123 (365)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~---~~~~~~~---~~ 123 (365)
+...+++++.+++++++++++|++ +||++||+++++||+|++. +|++.+.++++.... +.+++++ ++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~vyl~d~~c~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (478)
T PLN02932 39 LQNNLTSLTMFFLYLALGSTLYLM------TRPKPVYLVDFSCYLPPSH-LKASIQTIMGHVRRVREAGAWKQESDYLMD 111 (478)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh------cCCCcEEEEeeeeecCccc-ccccHHHHHHHHHhhcccCCCCccchhHHH
Confidence 344567888888999999999999 9999999999999999999 999999999998766 6788877 99
Q ss_pred HHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHH
Q 017814 124 FLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRI 203 (365)
Q Consensus 124 ~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v 203 (365)
|++||++||||++|+|+|+.....|+ .++|+.+++++++++.+|+++||+++|++|+|||+||++|+++.++|+++++|
T Consensus 112 f~~~i~~rsGig~~t~~p~~~~~~~~-~~~~~~~~~ea~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~~~Pslaa~V 190 (478)
T PLN02932 112 FCEKILERSGLGQETYIPEGLQCLPL-QQNLAVSRKETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSIL 190 (478)
T ss_pred HHHHHHHHcCCCCceeeccccccCCH-HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCCcHHHHH
Confidence 99999999999999999988877665 34899999999999999999999999999999999999988888999999999
Q ss_pred HHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEee
Q 017814 204 INRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (365)
Q Consensus 204 ~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~ 283 (365)
+++||+++++.+||++||||+||++||++|+++++++++++||||++|.+|.+||.+++++++++++||||||||+||++
T Consensus 191 ~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~~~d~r~~l~t~~LFgDGAAAvlLs~ 270 (478)
T PLN02932 191 VNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENITQNLYLGNNKSMLVTNCLFRIGGAAILLSN 270 (478)
T ss_pred HHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecccccCCCcchhhhccceeecccceEEEEec
Confidence 99999998899999999999999999999999999999999999999999999999989999999999999999999999
Q ss_pred cccccccceeEEeeeeeeeecCCCcchhhhcccccccCCCcceecHHHHHHHHHHHHHhHHhhcCcccccccceeeeccc
Q 017814 284 NRALKHKAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRVEPES 363 (365)
Q Consensus 284 ~~~~~~~~~~~l~~~vrt~~~~d~~~~~~~~~~~~~~G~~g~~Lsk~vp~~~~~~L~~~i~~L~p~vlp~~e~~~~~~~~ 363 (365)
+++++++++|+++|++++|.++|++.|+|+++++|+.|..|+.|+|++|.+++++++.|+++++|+|+|++||++|+++.
T Consensus 271 ~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp~~~~~al~~ni~~~~p~v~p~~e~~~~~~~~ 350 (478)
T PLN02932 271 RSRDRKRAKYELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKNLPMVAARTLKINIATLGPLVLPLSEKFHFFVRF 350 (478)
T ss_pred ccccccCcceEEEeeeeeeeccCCCccccceeecccCCcceeeECccchHHHHHHHhhhhhccccccccchhhhHHHHHH
Confidence 87654568999999999999999999999999999999889999999999999999999999999999999999987653
No 4
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=4.6e-63 Score=507.29 Aligned_cols=307 Identities=36% Similarity=0.641 Sum_probs=291.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHH
Q 017814 50 SYFFFSFIMALLYLLPLFYIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNM 129 (365)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~ 129 (365)
+...+++++.++++++|++++|++ +||++||+++++||+|++. +|++.+.++++.+..+.+++++++|++|++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~vylvd~~c~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 157 (521)
T PLN02854 85 LHLDTATRLTGSAFLLFLLGLYWA------KRSKPVYLVDFACYKPEDE-RKISVDSFLTMTEENGSFEDETVQFQRRIS 157 (521)
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHH------cCCCcEEEEeeeeecCCcc-ccccHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 334578889999999999999999 9999999999999999999 999999999999999999999999999999
Q ss_pred HHhCcceEEeecCCCcCCCCCCcchHHhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCC
Q 017814 130 VSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNL 209 (365)
Q Consensus 130 ~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL 209 (365)
+|||+++++|.|+..+..||+ ++|+++++|++.+++.|+++||+++|++|+|||+||++||.++++|+++++|+++||+
T Consensus 158 ~~sg~g~~ty~P~~~~~~~~~-~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGl 236 (521)
T PLN02854 158 TRSGLGDETYLPRGITSRPPN-LCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKL 236 (521)
T ss_pred HhcCCCCccccCccccCCCCc-chHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCC
Confidence 999999999999999987875 4999999999999999999999999999999999999988888999999999999999
Q ss_pred CCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeecccccc
Q 017814 210 RNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKH 289 (365)
Q Consensus 210 ~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~~~~ 289 (365)
++++.++|++||||+||+.||++|+++++++++++||||++|.+|.+||.++||+++++++||||||||+||++++.+++
T Consensus 237 r~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~ 316 (521)
T PLN02854 237 RTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRK 316 (521)
T ss_pred CCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEeccccccc
Confidence 98899999999999999999999999999999999999999999999999999999999999999999999999765555
Q ss_pred cceeEEeeeeeeeecCCCcchhhhcccccccCCCcceecHHHHHHHHHHHHHhHHhhcCcccccccceeeecccC
Q 017814 290 KAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRVEPESW 364 (365)
Q Consensus 290 ~~~~~l~~~vrt~~~~d~~~~~~~~~~~~~~G~~g~~Lsk~vp~~~~~~L~~~i~~L~p~vlp~~e~~~~~~~~~ 364 (365)
+++|++.|.+++|.++|++.|+|+.+++|+.|..|+.+++++|.+++++++.+++++||+|+|.+||++|+.+++
T Consensus 317 ~~k~~L~~~v~t~~~ad~~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i 391 (521)
T PLN02854 317 RSKYQLVHTVRTHKGADDKNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLV 391 (521)
T ss_pred ccchheeeEEEEEEeeCCCccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHH
Confidence 689999999999999999999999999999998899999999999999999999999999999999999876643
No 5
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.6e-62 Score=502.80 Aligned_cols=305 Identities=37% Similarity=0.632 Sum_probs=288.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHH
Q 017814 50 SYFFFSFIMALLYLLPLFYIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNM 129 (365)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~ 129 (365)
+...+++++.++++++|++++|++ +||++||+++++||+|++. +|++.+.++++.+..+.+++++++|++||+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~vylvd~~c~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~ 141 (502)
T PLN02377 69 LQYNLVSIIICSAFLVFGLTVYIM------TRPRPVYLVDYSCYRAPDH-LKAPFARFMEHSRLTGDFDDSSLEFQRKIL 141 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------cCCCCEEEEeeeeecCCcc-ccccHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 344567888899999999999999 9999999999999999999 999999999999999999999999999999
Q ss_pred HHhCcceEEeecCCCcCCCCCCcchHHhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCC
Q 017814 130 VSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNL 209 (365)
Q Consensus 130 ~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL 209 (365)
++|||++++|.|+..++.||+ ++|+++++++++++.+|+++||+++|++|+|||+||++||+++++|+++++|+++||+
T Consensus 142 ~~sgig~~t~~p~~~~~~~~~-~~~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGl 220 (502)
T PLN02377 142 ERSGLGEDTYVPEAMHYIPPR-PSMAAAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKL 220 (502)
T ss_pred HhcCCCCccccCchhccCCcc-chHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCC
Confidence 999999999999998887775 4999999999999999999999999999999999999888888999999999999999
Q ss_pred CCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeecccccc
Q 017814 210 RNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKH 289 (365)
Q Consensus 210 ~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~~~~ 289 (365)
++++.++|++||||+||+.||++|+++++++++++||||++|.+|.+||.+++++++++++||||||||+||++++.+++
T Consensus 221 r~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~ 300 (502)
T PLN02377 221 RGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKR 300 (502)
T ss_pred CCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEeccccccc
Confidence 98999999999999999999999999999999999999999999999999988999999999999999999999766656
Q ss_pred cceeEEeeeeeeeecCCCcchhhhcccccccCCCcceecHHHHHHHHHHHHHhHHhhcCcccccccceeeecc
Q 017814 290 KAILKLNCLVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRVEPE 362 (365)
Q Consensus 290 ~~~~~l~~~vrt~~~~d~~~~~~~~~~~~~~G~~g~~Lsk~vp~~~~~~L~~~i~~L~p~vlp~~e~~~~~~~ 362 (365)
+++|++.|.+++|.++|++.|+|+++++|+.|..|+.+++++|.+++++++.++++++|.|+|++||++|+++
T Consensus 301 ~a~~~l~~iv~t~~~~d~~~~~~i~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~ 373 (502)
T PLN02377 301 RSKYKLVHVVRTHRGADDKAFRCVYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFAT 373 (502)
T ss_pred ccccccceEEEEEEEEcCCccceeeeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHH
Confidence 7889988999999999999999999988988878999999999999999999999999999999999998764
No 6
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.6e-60 Score=479.93 Aligned_cols=290 Identities=37% Similarity=0.670 Sum_probs=274.5
Q ss_pred HHHHHHHHhhhhhhcCCCCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCc
Q 017814 66 LFYIIFHLYKWVLQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVV 145 (365)
Q Consensus 66 ~~~~~~~~~~~~~~~r~~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~ 145 (365)
..+++|++ +||++||+++++||+|++. +|++.+.++++....+.+++++++|++||+++|||++++|.|+...
T Consensus 47 ~~~~~~~~------~~~~~vylvd~~c~~p~~~-~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et~~p~~~~ 119 (466)
T PLN00415 47 IFFYAYST------TRSKPVYLVDFSCHQPTDS-CKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDTYSPRCML 119 (466)
T ss_pred HHHHHHHH------cCCCcEEEEeeeeecCCcc-ccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCeeeCCccc
Confidence 35678888 8999999999999999999 9999999999999999999999999999999999999999999888
Q ss_pred CCCCCCcchHHhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccch
Q 017814 146 EGREESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSA 225 (365)
Q Consensus 146 ~~~~~~~s~~~~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsg 225 (365)
..+|. +++++.+++++.....|+++||+++|++|+|||+||++||.++++|+++++++++||+++++.++|+++|||+|
T Consensus 120 ~~~~~-~~~~~~~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gmGCsg 198 (466)
T PLN00415 120 TSPPT-PSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSA 198 (466)
T ss_pred cCCCC-CChhhhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEeccccchH
Confidence 76764 58999999999999999999999999999999999988887779999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcccCCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeecccccccceeEEeeeeeeeecC
Q 017814 226 SVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGS 305 (365)
Q Consensus 226 g~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~~~~~~~~~l~~~vrt~~~~ 305 (365)
|+.||++|+++++++++++||||++|.+|.++|.++|++++++++||||||||+||++++.++++++|+|.|.+|+|.++
T Consensus 199 gv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~vrt~~~~ 278 (466)
T PLN00415 199 GAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGS 278 (466)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEEEecCCC
Confidence 99999999999999999999999999999999888899999999999999999999998877667899999999999988
Q ss_pred CCcchhhhcccccccCCCcceecHHHHHHHHHHHHHhHHhhcCcccccccceeeeccc
Q 017814 306 NDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVPKILPLREQFRVEPES 363 (365)
Q Consensus 306 d~~~~~~~~~~~~~~G~~g~~Lsk~vp~~~~~~L~~~i~~L~p~vlp~~e~~~~~~~~ 363 (365)
++++|.|++|++|+.|..|+.|||+||.++++++++|+++|+|+++|++||++|++++
T Consensus 279 ~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~ 336 (466)
T PLN00415 279 SDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFL 336 (466)
T ss_pred ChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHH
Confidence 8889999999999999889999999999999999999999999999999999988654
No 7
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=100.00 E-value=6.1e-40 Score=305.35 Aligned_cols=204 Identities=22% Similarity=0.267 Sum_probs=168.2
Q ss_pred hcCCCCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCCh--hHHHHHHHHHHHhCcceEEeecCCCcC--CC----CC
Q 017814 79 QKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGL--EEYRFLLKNMVSSGIGEETYGPRNVVE--GR----EE 150 (365)
Q Consensus 79 ~~r~~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~--~~~~~~~ri~~~sGI~~R~~~~~~~~~--~~----~~ 150 (365)
++.+++++|+++|+++|++. ++|+++.+.+.+....+. +..++++++++++||++||.+.+.++. .| ..
T Consensus 9 ~~~~g~A~Il~IgTA~P~~~---~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~ 85 (226)
T PF00195_consen 9 QRSPGPAYILSIGTAVPPHR---ITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFA 85 (226)
T ss_dssp HS-SSSEEEEEEEEE-SSEE---EEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSS
T ss_pred ccCCCCeEEEEEEEeCCCce---ecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhcc
Confidence 46678999999999999999 999999998654433333 445789999999999999998764321 11 11
Q ss_pred Cc----chHHhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchH
Q 017814 151 SP----SLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSAS 226 (365)
Q Consensus 151 ~~----s~~~~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg 226 (365)
.| +|+.|.+++.+|+.+|+++||+++|++++|||+||+++|++...|+++.+|+++|||++++.++.+++|||+||
T Consensus 86 ~ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg 165 (226)
T PF00195_consen 86 DPSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGG 165 (226)
T ss_dssp SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhH
Confidence 12 57779999999999999999999999999999999998898999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcccCCeEEEEEeccCCCCCcCC--CCcchhhhhhhccCCeEEEEEeecc
Q 017814 227 VVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCG--REKSMMLSNILFRSGGCSMLLTNNR 285 (365)
Q Consensus 227 ~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~~~~~--~dr~~lv~~~LFgDGAAAvlLs~~~ 285 (365)
+.||++|+++.+++|..+||||++|.||++|+.. .+++++|+++||||||||+||+.+|
T Consensus 166 ~~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 166 AAGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 9999999999999999999999999999999853 4689999999999999999999875
No 8
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.3e-39 Score=306.29 Aligned_cols=253 Identities=15% Similarity=0.184 Sum_probs=214.3
Q ss_pred eEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHH-HhCcceEEeecCCCcCCCCCC--cchHHhhhhH
Q 017814 85 CYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMV-SSGIGEETYGPRNVVEGREES--PSLAEAFSEM 161 (365)
Q Consensus 85 v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~-~sGI~~R~~~~~~~~~~~~~~--~s~~~~~e~a 161 (365)
.+|.++++++|++. +.|.|+.+.+.+.. ..++.+.+.|.+. +.+|++|+++.|.+++..+.. ..|+.|.|++
T Consensus 2 a~i~sv~t~~Ppy~---~~Qse~~d~f~~~~--~~~~~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a 76 (356)
T COG3424 2 AVIASVATALPPYR---YNQSEITDSFAELP--FQEGREDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEA 76 (356)
T ss_pred ceeeecccCCCccc---cchHHHHHHHHHhc--cccchHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHH
Confidence 58999999999999 99989988877654 2334666767776 788999999998888644422 2577799999
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHccc
Q 017814 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241 (365)
Q Consensus 162 ~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~ 241 (365)
.+++++|+++||+.+++.|+|||+||++++++..+||+++.++++||+++++.++.+++|||++|..||..|+++++++|
T Consensus 77 ~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P 156 (356)
T COG3424 77 VPLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAP 156 (356)
T ss_pred HHHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCc
Confidence 99999999999999999999999999988899999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEeccCCCCCcCCCC-cchhhhhhhccCCeEEEEEeecccccc-c-ceeEEeeeeeeeecCCCcchhhhccccc
Q 017814 242 NKLAIVVSTESMGPNWYCGRE-KSMMLSNILFRSGGCSMLLTNNRALKH-K-AILKLNCLVRTHFGSNDEAYECCMQVED 318 (365)
Q Consensus 242 ~~~aLVV~~E~~S~~~~~~~d-r~~lv~~~LFgDGAAAvlLs~~~~~~~-~-~~~~l~~~vrt~~~~d~~~~~~~~~~~~ 318 (365)
..+|||||+|.||++++..++ ++++|+.+|||||+||+|++.++..+. + .+..+ +..+++..+|+++ ++ .|
T Consensus 157 ~~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i-~~s~StL~~dse~---~M--gw 230 (356)
T COG3424 157 DANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDI-LDSFSTLYPDSED---IM--GW 230 (356)
T ss_pred cceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCcee-cccccccCCcccc---cc--ce
Confidence 999999999999999988654 569999999999999999999765332 2 23333 3456677777775 22 45
Q ss_pred ccCCCc--ceecHHHHHHHHHHHHHhHHhhcC
Q 017814 319 QQGHPG--FRLTKQLTKAAALAFTMNLQVLVP 348 (365)
Q Consensus 319 ~~G~~g--~~Lsk~vp~~~~~~L~~~i~~L~p 348 (365)
+.|+.| +.||+|+|.+|..+|++|++++.-
T Consensus 231 dv~d~G~~~vlSrdlp~lIe~~l~~~V~~fL~ 262 (356)
T COG3424 231 DVGDQGLKVVLSRDLPNLIESYLAPNVTTFLA 262 (356)
T ss_pred eecCCcEEEEEcCchhHHHHHHhhhhHHHHHH
Confidence 666666 779999999999999999998753
No 9
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=5.7e-36 Score=300.72 Aligned_cols=259 Identities=13% Similarity=0.136 Sum_probs=203.7
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccC-ChhHHH-HHHHHHHHhCcceEEeecCCC---cCC---C---CC-
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKL-GLEEYR-FLLKNMVSSGIGEETYGPRNV---VEG---R---EE- 150 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~-~~~~~~-~~~ri~~~sGI~~R~~~~~~~---~~~---~---~~- 150 (365)
.+++|.++|++.|++. ++|+|+.+++.+.... +.+.++ .+++|++++||++||++.+.. ++. + |.
T Consensus 15 ~~~~I~~igta~P~~~---~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~ 91 (393)
T PLN03172 15 GPATILAIGKATPANC---VSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSL 91 (393)
T ss_pred CCeEEEEEEecCCCcc---ccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCH
Confidence 5799999999999999 9999999998765421 223344 378899999999999977421 110 0 10
Q ss_pred CcchHHhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHH
Q 017814 151 SPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAV 230 (365)
Q Consensus 151 ~~s~~~~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL 230 (365)
..+++.|.+.+.+|+.+|+++||+++|++++|||+||++++++...|+++..|+++||+++++.++.+.+|||+|++.||
T Consensus 92 ~~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL 171 (393)
T PLN03172 92 DARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVL 171 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHH
Confidence 12577799999999999999999999999999999998766666799999999999999998888777677999999999
Q ss_pred HHHHHHHHcccCCeEEEEEeccCCCCCcCCC--CcchhhhhhhccCCeEEEEEeeccccc-ccceeEEeeeeeeeecCCC
Q 017814 231 DLVQQLFRTYKNKLAIVVSTESMGPNWYCGR--EKSMMLSNILFRSGGCSMLLTNNRALK-HKAILKLNCLVRTHFGSND 307 (365)
Q Consensus 231 ~lA~~ll~ag~~~~aLVV~~E~~S~~~~~~~--dr~~lv~~~LFgDGAAAvlLs~~~~~~-~~~~~~l~~~vrt~~~~d~ 307 (365)
++|.+++++++.++||||++|.+|.+++..+ +++++++++||||||+|+||++++... .++.++++... +...+++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~-~~~~~~t 250 (393)
T PLN03172 172 RLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAA-QTILPDS 250 (393)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeec-cEEecCC
Confidence 9999999999999999999999997774322 356788999999999999999865432 23567776543 3334555
Q ss_pred cchhhhcccccccCCCcceecHHHHHHHHHHHHHhHHhhcC
Q 017814 308 EAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVP 348 (365)
Q Consensus 308 ~~~~~~~~~~~~~G~~g~~Lsk~vp~~~~~~L~~~i~~L~p 348 (365)
+. .+.|...+.| .++.++++||..+.+++++.++.+..
T Consensus 251 ~~--~~~~~i~~~G-~~~~l~~~vp~~~~~~i~~~~~~~L~ 288 (393)
T PLN03172 251 DG--AIDGHLREVG-LTFHLLKDVPGLISKNIEKSLVEAFA 288 (393)
T ss_pred cc--cccceEEcCC-cEEEEechHHHHHHHHHHHHHHHHhh
Confidence 43 2334333444 35778999999999999999877653
No 10
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=6.5e-36 Score=300.01 Aligned_cols=259 Identities=12% Similarity=0.094 Sum_probs=200.3
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccC-Chh-HHHHHHHHHHHhCcceEEeecCCCc--CCCC----CC---
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKL-GLE-EYRFLLKNMVSSGIGEETYGPRNVV--EGRE----ES--- 151 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~-~~~-~~~~~~ri~~~sGI~~R~~~~~~~~--~~~~----~~--- 151 (365)
.+++|+++|+..|++. ++|+++.+++.+.... ..+ ..++++||++++||++||++.+.+. ..+. ..
T Consensus 14 ~~~~i~~i~ta~P~~~---~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~ 90 (389)
T PLN03168 14 GPACVLGIGTAVPPAE---FLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSL 90 (389)
T ss_pred CCeEEEEEeccCCCcc---cCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCH
Confidence 6799999999999999 9999999998776421 123 3345889999999999999774321 0010 11
Q ss_pred -cchHHhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHH
Q 017814 152 -PSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAV 230 (365)
Q Consensus 152 -~s~~~~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL 230 (365)
.+++.|.+++.+|+.+|+++||+++|++|+|||+||+++++++..|++++.|+++||+++++.+..+.+|||+|++.||
T Consensus 91 ~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL 170 (389)
T PLN03168 91 NVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVL 170 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHH
Confidence 2567799999999999999999999999999999999766667799999999999999997764444445999999999
Q ss_pred HHHHHHHHcccCCeEEEEEeccCCCCCcCC--CCcchhhhhhhccCCeEEEEEeeccccc-ccceeEEeeeeeeeecCCC
Q 017814 231 DLVQQLFRTYKNKLAIVVSTESMGPNWYCG--REKSMMLSNILFRSGGCSMLLTNNRALK-HKAILKLNCLVRTHFGSND 307 (365)
Q Consensus 231 ~lA~~ll~ag~~~~aLVV~~E~~S~~~~~~--~dr~~lv~~~LFgDGAAAvlLs~~~~~~-~~~~~~l~~~vrt~~~~d~ 307 (365)
++|+++++++++++|||||+|.+|.+|+.. ++.+++++++||||||+|+||++++... .++.+++... .+...|++
T Consensus 171 ~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~-~~~~~p~s 249 (389)
T PLN03168 171 RVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWA-GETILPES 249 (389)
T ss_pred HHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEee-eeEEEcCC
Confidence 999999999999999999999999888542 2356678899999999999999865421 1234454322 23345655
Q ss_pred cchhhhcccccccCCCcceecHHHHHHHHHHHHHhHHhhcC
Q 017814 308 EAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVP 348 (365)
Q Consensus 308 ~~~~~~~~~~~~~G~~g~~Lsk~vp~~~~~~L~~~i~~L~p 348 (365)
... +.|..++.| ..+.+++++|..+.++++..++.+..
T Consensus 250 ~~~--~~~~~~~~g-~~~~l~~~vp~~i~~~~~~~l~~~l~ 287 (389)
T PLN03168 250 DGA--IDGHLTEAG-LIFHLMKDVPGLISKNIEKFLNEARK 287 (389)
T ss_pred CCc--cCceEecCc-eEEEECHHHHHHHHHHHHHHHHHHHH
Confidence 542 333333334 34678999999999999999887643
No 11
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=2.2e-35 Score=296.37 Aligned_cols=259 Identities=15% Similarity=0.146 Sum_probs=203.0
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccC-ChhHH-HHHHHHHHHhCcceEEeecCCCc---C---CCCCC---
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKL-GLEEY-RFLLKNMVSSGIGEETYGPRNVV---E---GREES--- 151 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~-~~~~~-~~~~ri~~~sGI~~R~~~~~~~~---~---~~~~~--- 151 (365)
.+++|+++|+..|++. ++|+++.+++.+.... ..... +++++|++++||++||.+.+.+. . .++..
T Consensus 15 ~~~~i~~i~ta~P~~~---~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~ 91 (391)
T PLN03173 15 GPATIMAIGTSTPPNC---VDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSL 91 (391)
T ss_pred CCeEEEEEEccCCCcc---cCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCH
Confidence 5799999999999999 9999999998766421 22333 45889999999999998774321 1 11111
Q ss_pred -cchHHhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHH
Q 017814 152 -PSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAV 230 (365)
Q Consensus 152 -~s~~~~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL 230 (365)
.+++.|.+++.+|+.+|+++||+++|++|+|||+||++++++...|+.+..|+++||+++++.++.+.+|||+|++.||
T Consensus 92 ~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL 171 (391)
T PLN03173 92 DARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVL 171 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhcCccHHHHHHH
Confidence 2567799999999999999999999999999999999766666799999999999999998877777777999999999
Q ss_pred HHHHHHHHcccCCeEEEEEeccCCCCCcCCC--CcchhhhhhhccCCeEEEEEeeccccc-ccceeEEeeeeeeeecCCC
Q 017814 231 DLVQQLFRTYKNKLAIVVSTESMGPNWYCGR--EKSMMLSNILFRSGGCSMLLTNNRALK-HKAILKLNCLVRTHFGSND 307 (365)
Q Consensus 231 ~lA~~ll~ag~~~~aLVV~~E~~S~~~~~~~--dr~~lv~~~LFgDGAAAvlLs~~~~~~-~~~~~~l~~~vrt~~~~d~ 307 (365)
++|.+++++++.++||||++|.+|.+|+..+ +.+++++++||||||+|+||++++... ..++++++.. .++..+++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~-~~~~~~~t 250 (391)
T PLN03173 172 RLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSA-AQTILPDS 250 (391)
T ss_pred HHHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEee-eeEEecCC
Confidence 9999999999999999999999997775323 356778899999999999999865321 2245776543 33334555
Q ss_pred cchhhhcccccccCCCcceecHHHHHHHHHHHHHhHHhhcC
Q 017814 308 EAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVP 348 (365)
Q Consensus 308 ~~~~~~~~~~~~~G~~g~~Lsk~vp~~~~~~L~~~i~~L~p 348 (365)
+. .+.|...+.| .++.++++||..+.+++++.++.+..
T Consensus 251 ~~--~~~~~i~~~G-~~~~l~~~vp~~~~~~~~~~i~~~L~ 288 (391)
T PLN03173 251 DG--AIDGHLREVG-LTFHLLKDVPGLISKNVEKSLTEAFK 288 (391)
T ss_pred cc--ceeeEEEcCc-eEEEEecHHHHHHHHHHHHHHHHHHH
Confidence 43 2334333334 34778999999999999999877653
No 12
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=5.8e-35 Score=294.17 Aligned_cols=257 Identities=14% Similarity=0.137 Sum_probs=199.0
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccC-ChhHHH-HHHHHHHHhCcceEEeecCCC---cC---CC---CC-
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKL-GLEEYR-FLLKNMVSSGIGEETYGPRNV---VE---GR---EE- 150 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~-~~~~~~-~~~ri~~~sGI~~R~~~~~~~---~~---~~---~~- 150 (365)
.+++|+++|+..|++. ++|+++.+++.+.... +.+..+ ++++|++++||++||++.++. ++ .+ |.
T Consensus 19 ~~~~i~~i~ta~P~~~---~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~ 95 (401)
T PLN03170 19 GPATVLAIGTATPANC---VHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSL 95 (401)
T ss_pred CCeEEEEEeecCCCcc---ccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCH
Confidence 5699999999999999 9999999999875421 223344 488999999999999977422 11 00 10
Q ss_pred CcchHHhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCce-EEEecCCccchHHHH
Q 017814 151 SPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIK-AFNLSGMGCSASVVA 229 (365)
Q Consensus 151 ~~s~~~~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~-~~~l~~mGCsgg~~A 229 (365)
..+++.|.+++.+|+.+|+++||+++|++++|||+||++++++...|+++.+|+++||+++++. .++++. ||+|++.|
T Consensus 96 ~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~~-gC~G~~~a 174 (401)
T PLN03170 96 DARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQ-GCFAGGTV 174 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhcC-hhHHHHHH
Confidence 1256779999999999999999999999999999999876666679999999999999999765 456655 99999999
Q ss_pred HHHHHHHHHcccCCeEEEEEeccCCCCCc-CCC-CcchhhhhhhccCCeEEEEEeeccccc-ccceeEEeeeeeeeecCC
Q 017814 230 VDLVQQLFRTYKNKLAIVVSTESMGPNWY-CGR-EKSMMLSNILFRSGGCSMLLTNNRALK-HKAILKLNCLVRTHFGSN 306 (365)
Q Consensus 230 L~lA~~ll~ag~~~~aLVV~~E~~S~~~~-~~~-dr~~lv~~~LFgDGAAAvlLs~~~~~~-~~~~~~l~~~vrt~~~~d 306 (365)
|++|.+++++++.++||||++|.+|.+++ .++ +.++.++++||||||+|+||++++... ..+.+++... .++..|+
T Consensus 175 L~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~-~~~~~p~ 253 (401)
T PLN03170 175 LRVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSA-SQTILPD 253 (401)
T ss_pred HHHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeec-cceEecC
Confidence 99999999999999999999999998884 332 245677899999999999999876431 1234566432 3344565
Q ss_pred CcchhhhcccccccCCCcceecHHHHHHHHHHHHHhHHhhc
Q 017814 307 DEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLV 347 (365)
Q Consensus 307 ~~~~~~~~~~~~~~G~~g~~Lsk~vp~~~~~~L~~~i~~L~ 347 (365)
++.+ +.|...+.| ..+.++++||..+.+++...++.+.
T Consensus 254 ~~~~--~~~~i~~~G-~~~~l~~~vp~~~~~~i~~~v~~~L 291 (401)
T PLN03170 254 SEGA--IDGHLREVG-LTFHLLKDVPGLISKNIERSLEEAF 291 (401)
T ss_pred Cccc--ccceEEcCC-eEEEEehHHHHHHHHHHHHHHHHHH
Confidence 5532 333333344 2467899999999999999887754
No 13
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=3e-33 Score=280.94 Aligned_cols=260 Identities=13% Similarity=0.110 Sum_probs=195.9
Q ss_pred cCCCCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhH-HHHHHHHHHHhCcceEEeecCCC---cC---CCCCCc
Q 017814 80 KRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEE-YRFLLKNMVSSGIGEETYGPRNV---VE---GREESP 152 (365)
Q Consensus 80 ~r~~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~-~~~~~ri~~~sGI~~R~~~~~~~---~~---~~~~~~ 152 (365)
+.|++++|.++|+++|++. ++|+++.+.+......+++. .+.++||++++||++||++.+.. +. ..++.|
T Consensus 17 ~~~~~~~I~gigt~~P~~~---v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~ 93 (391)
T PLN03169 17 ANPGKATILALGKAFPSQL---VPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGTP 93 (391)
T ss_pred CCCCCeEEEEEEeeCCCee---cCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCCC
Confidence 5678899999999999999 99999999655432112333 34578899999999999885321 00 011112
Q ss_pred ----chHHhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCce-EEEecCCccchHH
Q 017814 153 ----SLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIK-AFNLSGMGCSASV 227 (365)
Q Consensus 153 ----s~~~~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~-~~~l~~mGCsgg~ 227 (365)
++..+.|.+.+|+.+|+++||+++|++|+|||+||+++++++..|+.+..|+++||+++++. .++++. ||+|++
T Consensus 94 ~~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~~-gC~g~~ 172 (391)
T PLN03169 94 TIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYFL-GCSGGV 172 (391)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeecccC-hhHHHH
Confidence 45558899999999999999999999999999999977778899999999999999998775 577776 999999
Q ss_pred HHHHHHHHHHHcccCCeEEEEEeccCCCCCcCC-C-CcchhhhhhhccCCeEEEEEeeccccc-ccceeEEeeeeeeeec
Q 017814 228 VAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCG-R-EKSMMLSNILFRSGGCSMLLTNNRALK-HKAILKLNCLVRTHFG 304 (365)
Q Consensus 228 ~AL~lA~~ll~ag~~~~aLVV~~E~~S~~~~~~-~-dr~~lv~~~LFgDGAAAvlLs~~~~~~-~~~~~~l~~~vrt~~~ 304 (365)
.||++|.+++++++.++||||++|.+|.+++.. . +....+.+++|||||+|+||++++... ....+++. ...+...
T Consensus 173 ~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~-~~~~~~i 251 (391)
T PLN03169 173 AGLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELH-TAIQQFL 251 (391)
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEE-eeeeeEc
Confidence 999999999999999999999999999877532 1 234556789999999999999866421 12334443 2223334
Q ss_pred CCCcchhhhcccccccCCCcceecHHHHHHHHHHHHHhHHhhc
Q 017814 305 SNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLV 347 (365)
Q Consensus 305 ~d~~~~~~~~~~~~~~G~~g~~Lsk~vp~~~~~~L~~~i~~L~ 347 (365)
|++.. .+.+...+.| +.+.++++||..+.+++++.++++.
T Consensus 252 p~~~~--~~~~~~~~~g-~~~~~g~~v~~~~~~~~~~~i~~~L 291 (391)
T PLN03169 252 PGTEK--TIDGRLTEEG-INFKLGRELPQKIEDNIEGFCKKLM 291 (391)
T ss_pred CCCcc--ccCceecCCc-eEEEECcHHHHHHHHHHHHHHHHHH
Confidence 54432 1323222333 2357899999999999988887654
No 14
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=3.8e-33 Score=276.45 Aligned_cols=257 Identities=25% Similarity=0.312 Sum_probs=197.3
Q ss_pred CeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccC--ChhHHHHHHHHHHHhCcceEEeecC--CCcCC------CCCCcc
Q 017814 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKL--GLEEYRFLLKNMVSSGIGEETYGPR--NVVEG------REESPS 153 (365)
Q Consensus 84 ~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~--~~~~~~~~~ri~~~sGI~~R~~~~~--~~~~~------~~~~~s 153 (365)
.+||.++++|+|++. ++|+++.+++...... .+...++.++|++++||++||++.+ .+... +.-..+
T Consensus 1 ~~~I~~~~~~~P~~~---v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~ 77 (361)
T cd00831 1 AATILAIGTAVPPHR---VPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDER 77 (361)
T ss_pred CcEEEEEEEeCCCCc---CCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcc
Confidence 479999999999999 9999999998653211 1345566789999999999999876 32211 111136
Q ss_pred hHHhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHH
Q 017814 154 LAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLV 233 (365)
Q Consensus 154 ~~~~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA 233 (365)
++.+.+++.+|+.+|+++||+++|++|+|||+||+++++++..|+++.+|+++||+++++.++|+++|||+|++.||++|
T Consensus 78 ~~~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A 157 (361)
T cd00831 78 NDIALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLA 157 (361)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHH
Confidence 77899999999999999999999999999999999777778999999999999999988999999977999999999999
Q ss_pred HHHHHcccCCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeecccccc--cceeEEeeeeeeeecCCCcchh
Q 017814 234 QQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKH--KAILKLNCLVRTHFGSNDEAYE 311 (365)
Q Consensus 234 ~~ll~ag~~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~~~~--~~~~~l~~~vrt~~~~d~~~~~ 311 (365)
.+++++++.++||||++|.+|..++.++++.+.+++++|||||+|+||++++...+ ...+++... .++..|++..
T Consensus 158 ~~~~~~~~~~~aLvv~~e~~s~~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~-- 234 (361)
T cd00831 158 KDLLEANPGARVLVVSTELCSLWYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRA-ASTLLPDSED-- 234 (361)
T ss_pred HHHHHHCCCCEEEEEEeecccceeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecc-cceeeecCCC--
Confidence 99999999999999999999974433222777778999999999999998765421 233454322 2222333321
Q ss_pred hhcccccccCCCcceecHHHHHHHHHHHHHhHHhhc
Q 017814 312 CCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLV 347 (365)
Q Consensus 312 ~~~~~~~~~G~~g~~Lsk~vp~~~~~~L~~~i~~L~ 347 (365)
.+.+.....| ..+.+++++|..+.+.+.+.++.+.
T Consensus 235 ~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~i~~~L 269 (361)
T cd00831 235 AMGWHLGEEG-LTFVLSRDVPRLVEKNLERVLRKLL 269 (361)
T ss_pred ceEEEEEcce-EEEEeChhHHHHHHHHHHHHHHHHh
Confidence 1222211112 2356788899888888887776654
No 15
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=4.9e-33 Score=280.12 Aligned_cols=257 Identities=14% Similarity=0.130 Sum_probs=192.3
Q ss_pred CCCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccC-C-hhHHHHHHHHHHHhCcceEEeecCCCc--CC-------CC-
Q 017814 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKL-G-LEEYRFLLKNMVSSGIGEETYGPRNVV--EG-------RE- 149 (365)
Q Consensus 82 ~~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~-~-~~~~~~~~ri~~~sGI~~R~~~~~~~~--~~-------~~- 149 (365)
+.+++|+++|+|+|++. ++|+++.+++.+.... + ++..+.++||++++||++||++.+++. .. .|
T Consensus 20 ~~~~~I~gigt~~P~~~---v~n~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~ 96 (399)
T PLN03171 20 DGLAAVLAIGTANPANC---VPQDEFPDFYFRATKSDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPS 96 (399)
T ss_pred CCCcEEEEEEeeCCCcc---cCHHHHHHHHHHHhcccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCC
Confidence 36799999999999999 9999999986432111 1 122334778999999999999876421 00 11
Q ss_pred CCcchHHhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHH
Q 017814 150 ESPSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVA 229 (365)
Q Consensus 150 ~~~s~~~~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~A 229 (365)
...+++.|.|.+.+|+.+|+++||+++|++|+|||+||+++++....|+.+.+++++||+++++......++||+|++.|
T Consensus 97 ~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~a 176 (399)
T PLN03171 97 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAA 176 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccCCccHHHHHH
Confidence 01256779999999999999999999999999999999976665569999999999999998665444444599999999
Q ss_pred HHHHHHHHHcccCCeEEEEEeccCCCCCcCCC-C-cchhhhhhhccCCeEEEEEeecccccccceeEEeeeeeeeecCCC
Q 017814 230 VDLVQQLFRTYKNKLAIVVSTESMGPNWYCGR-E-KSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSND 307 (365)
Q Consensus 230 L~lA~~ll~ag~~~~aLVV~~E~~S~~~~~~~-d-r~~lv~~~LFgDGAAAvlLs~~~~~~~~~~~~l~~~vrt~~~~d~ 307 (365)
|++|.+++++++.++||||++|.+|..++..+ + ..+++.++||||||+|+||+++++...+..+++.... +...+++
T Consensus 177 L~~A~~li~~~~~~~vLVv~~e~~s~~~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~-~~~~p~~ 255 (399)
T PLN03171 177 LRLAKDLAENNRGARVLVVAAEITLLLFNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAA-QAIIPES 255 (399)
T ss_pred HHHHHHHHHhCCCCeEEEEEEeccccccCCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEee-eEEecCC
Confidence 99999999999999999999999997664322 2 3566778999999999999987653223445665332 2234544
Q ss_pred cchhhhcccccccCCCcceec-HHHHHHHHHHHHHhHHh
Q 017814 308 EAYECCMQVEDQQGHPGFRLT-KQLTKAAALAFTMNLQV 345 (365)
Q Consensus 308 ~~~~~~~~~~~~~G~~g~~Ls-k~vp~~~~~~L~~~i~~ 345 (365)
.. .+.+...+.| ....++ +.+|..++++++..++.
T Consensus 256 ~~--~~~~~~~~~g-~~~~~~~~~vp~~i~~~l~~~l~~ 291 (399)
T PLN03171 256 DD--AINMHFTEGG-LDGNIGTRQVPGLIGDNIERCLLD 291 (399)
T ss_pred ch--heEEEEEcCC-ceEEECchhHHHHHHHHHHHHHHH
Confidence 43 2333223333 223566 99999999999888764
No 16
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=99.97 E-value=6.9e-32 Score=263.42 Aligned_cols=188 Identities=21% Similarity=0.326 Sum_probs=159.4
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhHH
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMD 162 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~ 162 (365)
..++|.++|.|+|+.. ++|+++.+.... ++| ||..++||++||++.+++ ...
T Consensus 2 ~~a~i~g~G~~lP~~~---vtn~d~e~~~~t----sde------wI~~rtGir~R~~a~~~e---------------~~s 53 (323)
T COG0332 2 MNAKILGIGSYLPERV---VTNADLEKRVDT----SDE------WIETRTGIRERRIAADDE---------------TTS 53 (323)
T ss_pred CcceEEEEEeecCCcc---cChHHHHhccCC----Ccc------eeeeecCCceeeecCCCc---------------cHH
Confidence 3678999999999999 999999855432 345 899999999999976542 245
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEE-eecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHccc
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVV-NVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv-~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~ 241 (365)
+|+++|+++||+++|++|+|||.||+ +++++++.|+.+..|+++||+.+ +.+||++. +|+|++.||.+|..++++|.
T Consensus 54 ~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~~-~~afDl~a-aCsgf~yaL~~A~~~i~sG~ 131 (323)
T COG0332 54 DLAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLGG-APAFDLQA-ACSGFLYALSVADGLIRSGG 131 (323)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCCC-cceeechh-hhHHHHHHHHHHHHHHHcCC
Confidence 89999999999999999999999999 56678889999999999999998 99999999 99999999999999999999
Q ss_pred CCeEEEEEeccCC--CCCcCCCCcchhhhhhhccCCeEEEEEeecccccccceeEEeeeeeeeecCCCcchhhhc
Q 017814 242 NKLAIVVSTESMG--PNWYCGREKSMMLSNILFRSGGCSMLLTNNRALKHKAILKLNCLVRTHFGSNDEAYECCM 314 (365)
Q Consensus 242 ~~~aLVV~~E~~S--~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~~~~~~~~~l~~~vrt~~~~d~~~~~~~~ 314 (365)
+++||||++|.+| ++| +||.. ..||||||+|+||++.+.+.+ ...++.++|...+++++
T Consensus 132 ~k~vLVVg~e~~S~~ld~---~dR~t---~vlFgDGAgAvvl~~~~~~~~--------i~~~~l~sdg~~~~~l~ 192 (323)
T COG0332 132 YKNVLVVGAETLSRILDW---TDRDT---CVLFGDGAGAVVLEATEDDNG--------ILDTDLGSDGSQGDLLY 192 (323)
T ss_pred CCEEEEEehhHhhccCCH---hhccc---eEEEcCCceEEEEecCCCCcC--------eeeeeeeccccCCCeee
Confidence 9999999999998 555 57766 899999999999999873322 22345556666554444
No 17
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.96 E-value=3.5e-28 Score=241.21 Aligned_cols=177 Identities=14% Similarity=0.154 Sum_probs=147.5
Q ss_pred cCCCCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhh
Q 017814 80 KRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFS 159 (365)
Q Consensus 80 ~r~~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e 159 (365)
.+-++++|.++++|+|++. ++|+++.+.... +++ ...+|+.+++||++||++.++ +
T Consensus 3 ~~~~~~~I~~~g~~lP~~~---v~~~~~~~~~~~----~~~--~~~~~i~~~~Gi~~R~~~~~~---------------e 58 (353)
T PRK12880 3 TRFDKAKISGICVSVPEHK---ICIDDELESVFS----NDI--KTLKRMKKVIGLNTRYICDEN---------------T 58 (353)
T ss_pred ccccccEEEEEEEECCCeE---ecHHHHHHHhcC----cch--hhhhhhhhccCceEEEeCCCC---------------C
Confidence 3457799999999999999 999875443211 111 124578899999999986543 2
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEe-ecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~-ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
++.+|+.+|+++||+++|++|+|||+||++ +++++..|+.+..|+++||+++++.++|+++ ||+|++.||++|+++++
T Consensus 59 ~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~~-~C~g~~~aL~~A~~~i~ 137 (353)
T PRK12880 59 CVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLGQ-ACAGYLYGLFVAHSLIQ 137 (353)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehhh-hhHHHHHHHHHHHHHHH
Confidence 467999999999999999999999999995 4558999999999999999998899999977 99999999999999999
Q ss_pred cccCCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeeccc
Q 017814 239 TYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
+++.+ ||||++|.+|..++++ |+.. ..+|||||+|+||++++.
T Consensus 138 ~~~~~-~LVv~~e~~S~~~~~~-d~~~---~~lFGDGAaA~vl~~~~~ 180 (353)
T PRK12880 138 SGLGK-ILLICGDTLSKFIHPK-NMNL---APIFGDGVSATLIEKTDF 180 (353)
T ss_pred cCCCC-EEEEEehhhhccCCcc-cCCc---eeeecccceEEEEEecCC
Confidence 99988 9999999999666443 3333 689999999999997553
No 18
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.95 E-value=1.4e-26 Score=226.11 Aligned_cols=168 Identities=15% Similarity=0.231 Sum_probs=143.0
Q ss_pred CeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhHHH
Q 017814 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (365)
Q Consensus 84 ~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~~ 163 (365)
+++|.++++|+|++. ++++++.+..+. +++ ++.+++||++|++..++ +.+.+
T Consensus 3 ~~~I~~~g~~lP~~~---v~~~~~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~---------------e~~~~ 54 (326)
T PRK05963 3 SSRIAGFGHAVPDRR---VENAEIEAQLGL----ETG------WIERRTGIRCRRWAAPD---------------ETLSD 54 (326)
T ss_pred ccEEEEEEEECCCCe---ecHHHHHHHcCC----CHH------HhhhccCCeEEEEcCCC---------------CCHHH
Confidence 579999999999999 999999987642 233 57889999999986443 23569
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe-ecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccC
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~-ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~ 242 (365)
|+.+|+++||+++|++|+|||+||++ +++++..|+.+.+|+++||+++ +.++|+.+ ||+|++.||++|.++++++ .
T Consensus 55 la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~~-~~~~di~~-~C~g~~~aL~~A~~~l~~~-~ 131 (326)
T PRK05963 55 LAASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQN-SGAIDLAG-ACAGFLYALVLADGFVRAQ-G 131 (326)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCCC-Cceeeccc-hhhHHHHHHHHHHHHHHcC-C
Confidence 99999999999999999999999995 4456789999999999999986 89999999 9999999999999999987 5
Q ss_pred CeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeeccc
Q 017814 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 243 ~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
++||||++|.++..++. .++. ...+|||||+|+||++++.
T Consensus 132 ~~aLVv~~d~~s~~~~~-~~~~---~~~lfGDgA~A~ll~~~~~ 171 (326)
T PRK05963 132 KPVLVVAANILSRRINM-AERA---SAVLFADAAGAVVLAPSAK 171 (326)
T ss_pred CeEEEEEechhhccCCc-cccC---ceEEEeecceEEEEEecCC
Confidence 89999999998854433 2333 3789999999999998664
No 19
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.95 E-value=1.9e-26 Score=226.00 Aligned_cols=181 Identities=17% Similarity=0.160 Sum_probs=147.1
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhccc-CChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhH
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKK-LGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEM 161 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~-~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a 161 (365)
++++|.++++|+|++. ++|+++.+.+..... ...+ ..++.+++||++|++..++ +..
T Consensus 4 ~~v~I~~~g~~lP~~~---v~~~~~~~~~~~~~~~~~~~----~~~i~~~~Gi~~R~~~~~~---------------~~~ 61 (338)
T PRK09258 4 SNVAILSLAYELAPVV---VTSSEIEERLAPLYERLRLP----PGQLEALTGIRERRWWPEG---------------TQL 61 (338)
T ss_pred cceEEEEEEecCCCcc---CcHHHHHHHhhhcccccCCC----hhHhhhhcCceeEecCCCC---------------CCH
Confidence 5799999999999999 999999997654221 0111 1256778999999985332 235
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcc
Q 017814 162 DEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (365)
Q Consensus 162 ~~La~~A~~~aL~~agi~p~dID~LIv~s-s~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag 240 (365)
.+|+.+|+++||+++|++++|||+||+++ ++++..|+.+..++++||+++++.++++++ ||+|++.||++|.++++++
T Consensus 62 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~-~C~~~~~al~~A~~~i~~g 140 (338)
T PRK09258 62 SDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSN-ACLGFLNGMLDAANMIELG 140 (338)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhh-hhHHHHHHHHHHHHHHHcC
Confidence 69999999999999999999999999854 457788999999999999997799999998 9999999999999999999
Q ss_pred cCCeEEEEEeccCCCCCcCC------C-C----cchhhhhhhccCCeEEEEEeeccc
Q 017814 241 KNKLAIVVSTESMGPNWYCG------R-E----KSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 241 ~~~~aLVV~~E~~S~~~~~~------~-d----r~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
+.++||||++|.++..++.+ + + ....+...+|||||+|+||++++.
T Consensus 141 ~~~~~Lvv~~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~ 197 (338)
T PRK09258 141 QIDYALVVSGESAREIVEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSL 197 (338)
T ss_pred CCCEEEEEEecccchhccchhhhhccCccchhhhhhccceEEecccceEEEEecCCC
Confidence 99999999999988543221 1 1 112244689999999999998654
No 20
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.94 E-value=7.5e-26 Score=221.21 Aligned_cols=170 Identities=15% Similarity=0.237 Sum_probs=143.8
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhHH
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMD 162 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~ 162 (365)
+.++|.++++|+|++. ++++++.+..+. +++ ++.+++||++|++.. + +...
T Consensus 3 ~~~~I~~~g~~lP~~~---v~~~~~~~~~~~----~~~------~i~~~~Gi~~R~~~~-~---------------~~~~ 53 (329)
T PRK07204 3 RYISIKGIGTYLPKRK---VDSLELDKKLDL----PEG------WVLKKSGVKTRHFVD-G---------------ETSS 53 (329)
T ss_pred CCcEEEEEEEeCCCce---ecHHHHHHhhCC----CHh------HhhhccCceEEeecC-C---------------CCHH
Confidence 5689999999999999 999999887542 232 678899999999864 2 2356
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEee-cCCCCCCcHHHHHHHHcCCCC-CceEEEecCCccchHHHHHHHHHHHHHcc
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRN-DIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~s-s~~~~~Ps~a~~v~~~LGL~~-~v~~~~l~~mGCsgg~~AL~lA~~ll~ag 240 (365)
+|+.+|+++||+++|++|+|||+||+++ +++...|+.+..|+++||+++ +++++++++ ||++++.||.+|..+++++
T Consensus 54 ~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~-~C~~~~~al~~a~~~l~~g 132 (329)
T PRK07204 54 YMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINS-TCLSFITALDTISYAIECG 132 (329)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEccc-hhHHHHHHHHHHHHHHHCC
Confidence 8999999999999999999999999864 445568999999999999986 479999998 9999999999999999999
Q ss_pred cCCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeeccc
Q 017814 241 KNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 241 ~~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
+.++||||++|.++..++. +++.. ..+|||||+|+||++++.
T Consensus 133 ~~~~~Lvv~~e~~s~~~~~-~~~~~---~~lfGDGAaA~ll~~~~~ 174 (329)
T PRK07204 133 RYKRVLIISSEISSVGLNW-GQNES---CILFGDGAAAVVITKGDH 174 (329)
T ss_pred CCCEEEEEEeccccCCCCc-ccCcc---eEEEecccEEEEEEEcCC
Confidence 9999999999998854422 22222 689999999999998654
No 21
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.94 E-value=1.8e-25 Score=217.68 Aligned_cols=170 Identities=17% Similarity=0.279 Sum_probs=144.7
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhHH
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMD 162 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~ 162 (365)
..++|.++++|+|++. ++++|+.+..+. +++ ++.+++||++|++..++ +...
T Consensus 3 ~~~~I~~ig~~~P~~~---v~~~e~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~---------------~~~~ 54 (325)
T PRK12879 3 SYARITGIGTYVPPRV---LTNDDLETFIDT----SDE------WIVQRTGIKERRIAHVE---------------EYTS 54 (325)
T ss_pred CCCEEEEEEEECCCcE---EcHHHHHHhcCC----CHH------HhhhccCceEEEECCCC---------------CCHH
Confidence 5689999999999999 999999987542 233 57889999999986443 2356
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHccc
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~s-s~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~ 241 (365)
+|+.+|+++||+++|++|+|||.||+++ +.++..|+.+..++++||+++ +..+++++ ||++++.||++|.+++++|+
T Consensus 55 ~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~~-~~~~~v~~-~C~~~~~al~~A~~~l~~g~ 132 (325)
T PRK12879 55 DLAIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIPN-AAAFDINA-ACAGFLYGLETANGLITSGL 132 (325)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCCC-CcEEEECc-cchHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999854 446778999999999999986 89999997 99999999999999999999
Q ss_pred CCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeeccc
Q 017814 242 NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 242 ~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
.++||||++|.++..+.. .++.. ..+|||||+|+||++++.
T Consensus 133 ~~~~Lvv~~e~~s~~~~~-~~~~~---~~~~GDgAaA~ll~~~~~ 173 (325)
T PRK12879 133 YKKVLVIGAERLSKVTDY-TDRTT---CILFGDGAGAVVLEATEN 173 (325)
T ss_pred CCEEEEEEehhhcCcCCc-cccCc---eEEEeecceEEEEEecCC
Confidence 999999999998854322 23333 579999999999998765
No 22
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=99.94 E-value=1.3e-25 Score=224.52 Aligned_cols=170 Identities=14% Similarity=0.209 Sum_probs=144.2
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhHH
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMD 162 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~ 162 (365)
.+++|+++|+|+|++. ++|+++.+.++. +++ +|.+++||++|+++.++ +.+.
T Consensus 46 ~~~~I~g~g~~lP~~~---v~n~el~~~~~~----~~~------~i~~~tGi~~R~~~~~~---------------~~~~ 97 (379)
T PLN02326 46 SGSKLVGCGSAVPKLL---ITNDDLSKLVDT----SDE------WIATRTGIRNRRVLSGD---------------ETLT 97 (379)
T ss_pred CCcEEEEEEEECCCce---ecHHHHHHhcCC----chh------heecccCcceEeecCCC---------------CCHH
Confidence 4789999999999999 999999987642 233 67899999999886443 2356
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccC
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~ 242 (365)
+|+.+|+++||+++|++|+|||+||+++++....++.+..++++||+++ ++.+++++ ||+|++.||++|.+++++++.
T Consensus 98 ~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~~-~~~~dv~~-~Ca~~~~aL~~A~~~l~~g~~ 175 (379)
T PLN02326 98 SLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCTN-ALAFDLTA-ACSGFVLGLVTAARFIRGGGY 175 (379)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCCC-Cceeeccc-cchHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999976554455677899999999985 99999998 999999999999999999999
Q ss_pred CeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeeccc
Q 017814 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 243 ~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
++||||++|.+|...+. +|+.. ..+|||||+|+||++++.
T Consensus 176 ~~vLVv~~e~~s~~~~~-~d~~~---~~lfGDGAaAvlL~~~~~ 215 (379)
T PLN02326 176 KNVLVIGADALSRYVDW-TDRGT---CILFGDGAGAVVLQACDD 215 (379)
T ss_pred CEEEEEEechhcCCCCc-cccCc---eEEEcceeEEEEEEEcCC
Confidence 99999999999854432 34443 469999999999998764
No 23
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=99.94 E-value=1.9e-25 Score=216.26 Aligned_cols=169 Identities=18% Similarity=0.280 Sum_probs=143.7
Q ss_pred CeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhHHH
Q 017814 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (365)
Q Consensus 84 ~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~~ 163 (365)
+++|.++++|+|++. ++++++.+..+. +++ ++.+++||++|+++.++ ++..+
T Consensus 1 ~~~I~~i~~~lP~~~---~~~~~~~~~~~~----~~~------~~~~~~Gi~~r~~~~~~---------------~~~~~ 52 (320)
T cd00830 1 NARILGIGSYLPERV---VTNDELEKRLDT----SDE------WIRTRTGIRERRIADPG---------------ETTSD 52 (320)
T ss_pred CCEEEEEEEECCCcE---EcHHHHHHHcCC----CHH------HhhhccCceEEeeCCCC---------------CCHHH
Confidence 478999999999999 999999987632 222 67889999999986543 23569
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccC
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~ss-~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~ 242 (365)
|+.+|+++||+++|++++|||.||++++ .....|+.+..+++++|++ +++.+++++ ||++++.||.+|.+++++++.
T Consensus 53 la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~~-~C~s~~~al~~A~~~i~~g~~ 130 (320)
T cd00830 53 LAVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDINA-ACSGFLYGLSTAAGLIRSGGA 130 (320)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeeccc-cchHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999998544 4556899999999999998 499999997 999999999999999999999
Q ss_pred CeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeeccc
Q 017814 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 243 ~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
++||||++|.++..++. +++. ...+|||||+|+||++++.
T Consensus 131 ~~vLvv~~e~~s~~~~~-~~~~---~~~~~GDgAaA~ll~~~~~ 170 (320)
T cd00830 131 KNVLVVGAETLSRILDW-TDRS---TAVLFGDGAGAVVLEATEE 170 (320)
T ss_pred CEEEEEEehhhccccCc-ccCC---ceEEEeccceEEEEEecCC
Confidence 99999999999854432 2222 3689999999999998765
No 24
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.93 E-value=3e-25 Score=221.99 Aligned_cols=185 Identities=13% Similarity=0.172 Sum_probs=147.6
Q ss_pred CeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhHHH
Q 017814 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (365)
Q Consensus 84 ~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~~ 163 (365)
+++|.++++|+|++. ++|+++.++++......+ ...+||++++||++|+++.+.... + .+...+
T Consensus 2 ~v~I~gig~~lP~~~---v~n~~~~~~~~~~~~~~~---~~~~~i~~~~Gi~~R~~~~~~~~~--~--------~~~~~~ 65 (378)
T PRK06816 2 NVYITSTGAFLPGEP---VSNDEMEAYLGLINGKPS---RARRIILRNNGIKTRHYALDPEGR--P--------THSNAQ 65 (378)
T ss_pred CeEEEeeeecCCCCc---cCHHHHHHHHhhccCCcH---HHHHHHHHhCCCceEEEEECCCCC--C--------CCCHHH
Confidence 589999999999999 999999998765431111 123489999999999998654211 1 023569
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccC
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~s-s~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~ 242 (365)
|+.+|+++||+++|++|+|||+||+++ ++++..|+.+..|+++||+++ ++.+++++ +|+|++.||++|.+++++|+.
T Consensus 66 La~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~-~~~~~v~~-~Cas~~~al~~A~~~i~sg~~ 143 (378)
T PRK06816 66 MAAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAPP-IEVVSSAG-VCAAGMMALKYAYLSVKAGES 143 (378)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCCC-CceeeecC-cCHHHHHHHHHHHHHHHCCCC
Confidence 999999999999999999999999965 445678999999999999987 89999977 999999999999999999999
Q ss_pred CeEEEEEeccCCCCCcCCC--C---------cc------hhhhhhhccCCeEEEEEeeccc
Q 017814 243 KLAIVVSTESMGPNWYCGR--E---------KS------MMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 243 ~~aLVV~~E~~S~~~~~~~--d---------r~------~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
++||||++|.+|..++.++ + +. .-..+++|||||+|+||++.+.
T Consensus 144 ~~vLvv~~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~ 204 (378)
T PRK06816 144 RNAVATASELASRWFRASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPR 204 (378)
T ss_pred CEEEEEeEccchhhhhhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCC
Confidence 9999999999995543211 0 00 0111457999999999998665
No 25
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.93 E-value=3.7e-24 Score=213.30 Aligned_cols=194 Identities=14% Similarity=0.182 Sum_probs=147.7
Q ss_pred CeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcc-cCChhH---HH----------HHHHHHHHhCcceEEeecCCC----c
Q 017814 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEE---YR----------FLLKNMVSSGIGEETYGPRNV----V 145 (365)
Q Consensus 84 ~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~-~~~~~~---~~----------~~~ri~~~sGI~~R~~~~~~~----~ 145 (365)
+++|+++|+|+|++. ++|+|+.++++... +++++. +. ..++|.+++||++|++..+.. .
T Consensus 2 ~~~I~~~g~~lP~~~---v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~ 78 (372)
T PRK07515 2 NVVISGTGLYTPPES---ISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPD 78 (372)
T ss_pred CcEEEEEEeecCCcc---ccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCccc
Confidence 589999999999999 99999999863211 111110 00 145788899999999976421 0
Q ss_pred CCCCCC-cchHHhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCcc
Q 017814 146 EGREES-PSLAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGC 223 (365)
Q Consensus 146 ~~~~~~-~s~~~~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss-~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGC 223 (365)
..++.. .++....+.+.+|+.+|+++||+++|++++|||.||++++ .....|+.+..++++||++ ...++++. ||
T Consensus 79 ~~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~~-aC 155 (372)
T PRK07515 79 RMRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMNV-AC 155 (372)
T ss_pred ccCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEecc-hh
Confidence 001100 0111222356789999999999999999999999998654 4567899999999999996 47899987 99
Q ss_pred chHHHHHHHHHHHHHcccCCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeecccc
Q 017814 224 SASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRAL 287 (365)
Q Consensus 224 sgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~~ 287 (365)
++++.||.+|.+++++|..++||||++|.++..++. +++.. ..+|||||+|+||++.+..
T Consensus 156 asg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~~~-~d~~~---~~lfGDgAaA~vL~~~~~~ 215 (372)
T PRK07515 156 SSATFGIQTAANAIRSGSARRVLVVNPEICSGHLNF-RDRDS---HFIFGDVATAVIVERADTA 215 (372)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEEeeecccccccc-cCCCC---CEEecCccEEEEEeecccc
Confidence 999999999999999999999999999999854422 34433 6899999999999987643
No 26
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=99.93 E-value=4.9e-25 Score=215.67 Aligned_cols=169 Identities=15% Similarity=0.252 Sum_probs=141.7
Q ss_pred CeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhHHH
Q 017814 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (365)
Q Consensus 84 ~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~~ 163 (365)
.++|+++|.|+|++. ++|+|+.++++. +++ +|.+++||++|++..+. +...+
T Consensus 2 ~v~I~~~g~~lP~~~---v~~~e~~~~~~~----~~~------~i~~~~gi~~r~~~~~~---------------~~~~~ 53 (326)
T CHL00203 2 GVHILSTGSSVPNFS---VENQQFEDIIET----SDH------WISTRTGIKKRHLAPSS---------------TSLTK 53 (326)
T ss_pred ccEEEEEEEECCCeE---EcHHHHHHhcCC----Chh------hEeeccCeEEEEeCCCC---------------CCHHH
Confidence 479999999999999 999999988752 122 67789999999875543 23569
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCC
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNK 243 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~ 243 (365)
|+.+|+++||+++|++|+|||.||+.+++....++.+..++++||+++ ++.+++++ ||++|+.||..|.+++++|..+
T Consensus 54 la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~~~~~~v~~~Lg~~~-~~~~~v~~-~Casg~~al~~A~~~i~sg~~~ 131 (326)
T CHL00203 54 LAAEAANKALDKAHMDPLEIDLIILATSTPDDLFGSASQLQAEIGATR-AVAFDITA-ACSGFILALVTATQFIQNGSYK 131 (326)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCchHHHHHHHhCCCC-Cceeeecc-cchhHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999999965443334456788999999986 88999998 9999999999999999999999
Q ss_pred eEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeeccc
Q 017814 244 LAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 244 ~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
++|||++|.+|..++.+ ++. ...+|||||+|+||++.+.
T Consensus 132 ~~Lvv~~e~~s~~~~~~-~~~---~~~~fgDga~A~ll~~~~~ 170 (326)
T CHL00203 132 NILVVGADTLSKWIDWS-DRK---TCILFGDGAGAAIIGASYE 170 (326)
T ss_pred EEEEEEehhhhCcCCcc-cCC---ceEEEcceeeEEEEEEcCC
Confidence 99999999999655333 333 3689999999999998654
No 27
>PRK06840 hypothetical protein; Validated
Probab=99.92 E-value=1.4e-24 Score=213.28 Aligned_cols=173 Identities=17% Similarity=0.191 Sum_probs=141.3
Q ss_pred CCCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhH
Q 017814 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEM 161 (365)
Q Consensus 82 ~~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a 161 (365)
|++++|.+++.|+|++. ++++++.+..+. +++ ++.+++||++|++..++ +..
T Consensus 2 ~~~v~I~~~~~~lP~~~---v~~~~l~~~~g~----~~~------~~~~~~Gi~~r~~~~~~---------------~~~ 53 (339)
T PRK06840 2 EMNVGIVGTGVYLPKDV---MTAEEIAEKTGI----PEE------VVIEKFGIYEKPVPGPE---------------DHT 53 (339)
T ss_pred CCceEEEEEEEeCCCcc---cCHHHHHHHhCC----CHH------HHhhhcCcceEeeCCCC---------------CCH
Confidence 67899999999999999 999999887642 233 56689999999986442 235
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeec--CCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHc
Q 017814 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVS--LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (365)
Q Consensus 162 ~~La~~A~~~aL~~agi~p~dID~LIv~ss--~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~a 239 (365)
.+|+.+|+++||+++|++|+|||+||++++ .++..|+.+.++++++|+++ +..+++.+ ||++++.||++|.+++++
T Consensus 54 ~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~~-~~~~~v~~-~C~~~~~al~~A~~~l~~ 131 (339)
T PRK06840 54 SDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAKN-AWAFDIMA-VCASFPIALKVAKDLLYS 131 (339)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCCC-cccccccc-cchHHHHHHHHHHHHHhc
Confidence 699999999999999999999999997543 35678999999999999985 89999988 999999999999999999
Q ss_pred -ccCCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeeccc
Q 017814 240 -YKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 240 -g~~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
+..+++|||++|..+...+..+..... ...|||||+|+||++++.
T Consensus 132 ~g~~~~~Lvv~~~~~s~~~~~~~~~~~~--~~~~GDgAaA~ll~~~~~ 177 (339)
T PRK06840 132 DPSIENVLLVGGYRNSDLVDYDNPRTRF--MFNFAAGGSAALLKKDAG 177 (339)
T ss_pred CCCccEEEEEeecccccccCcCCCCeee--eccCCCceeEEEEEecCC
Confidence 678899999999987433322221211 124899999999998654
No 28
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=99.92 E-value=5.9e-24 Score=206.58 Aligned_cols=170 Identities=20% Similarity=0.319 Sum_probs=142.8
Q ss_pred CeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhHHH
Q 017814 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (365)
Q Consensus 84 ~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~~ 163 (365)
.++|.++++|+|++. ++++++.+..+. +++ ++.+++||++|++..++ +.+.+
T Consensus 2 ~~~I~~i~~~~P~~~---~~~~~~~~~~~~----~~~------~i~~~~gi~~r~~~~~~---------------~~~~~ 53 (318)
T TIGR00747 2 YAGILGTGSYLPEKV---LTNADLEKMVDT----SDE------WIVTRTGIKERRIAADD---------------ETSST 53 (318)
T ss_pred CCEEEEEEEECCCce---ecHHHHHHhcCC----chH------HeecccCceEEEECCCC---------------CCHHH
Confidence 478999999999999 999999987642 122 57789999999875443 23569
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccC
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~s-s~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~ 242 (365)
|+.+|+++||+++|++|+|||.+|+.+ ++.+..|+.+.++++++|+++ ++.+++++ ||++++.||++|.+++++|..
T Consensus 54 la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~~-~~~~~v~~-~C~s~~~al~~A~~~i~~g~~ 131 (318)
T TIGR00747 54 MGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIKG-IPAFDLSA-ACAGFIYALSVAKQYIESGKY 131 (318)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCCC-CcEeehhh-hhHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999854 445678999999999999986 89999987 999999999999999999999
Q ss_pred CeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeecccc
Q 017814 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRAL 287 (365)
Q Consensus 243 ~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~~ 287 (365)
+++||+++|.++..++. .++.. ..+|||||+|+||++++..
T Consensus 132 ~~~Lvv~~e~~~~~~~~-~~~~~---~~~~GDGAaA~lL~~~~~~ 172 (318)
T TIGR00747 132 KTVLVVGAEKLSSTLDW-TDRGT---CVLFGDGAGAVVLGESEDP 172 (318)
T ss_pred CEEEEEEehhhcCcCCc-CCCCe---EEEEecceeEEEEeecCCC
Confidence 99999999998744322 23433 5689999999999987653
No 29
>PRK04262 hypothetical protein; Provisional
Probab=99.92 E-value=1.9e-24 Score=213.64 Aligned_cols=166 Identities=17% Similarity=0.234 Sum_probs=140.3
Q ss_pred CeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhHHH
Q 017814 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (365)
Q Consensus 84 ~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~~ 163 (365)
+++|.+++.|+|++. ++++++.+..+. +++ ++.+++||.+|++..++ +...+
T Consensus 2 ~v~I~~~g~ylP~~~---v~~~el~~~~~~----~~~------~i~~~~Gi~~R~~~~~~---------------~~~~~ 53 (347)
T PRK04262 2 MVGIVGYGAYIPRYR---IKVEEIARVWGD----DPE------AIKRGLGVEEKSVPGPD---------------EDTAT 53 (347)
T ss_pred ceeEEEEEEeCCCEE---ecHHHHHHHhCc----CHH------HHhhccCeeeeecCCCC---------------cCHHH
Confidence 589999999999999 999999987642 333 78889999999886443 23569
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccC
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~s-s~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~ 242 (365)
|+.+|+++||+++|++|+|||+||+++ ++.+..|+.+..++++||+++++.++++++ ||++++.||+.|.+++++|+.
T Consensus 54 la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~~-~C~~~~~aL~~A~~~i~sg~~ 132 (347)
T PRK04262 54 IAVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLEF-ACKAGTAALQAAMGLVKSGMI 132 (347)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHHH-hHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999854 456678999999999999987789999988 999999999999999999999
Q ss_pred CeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeecc
Q 017814 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNR 285 (365)
Q Consensus 243 ~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~ 285 (365)
++||||++|....+. .++. ...|||||+|+||++++
T Consensus 133 ~~aLVv~~e~~~~~~---~~~~----~~~~GDGA~A~ll~~~~ 168 (347)
T PRK04262 133 KYALAIGADTAQGAP---GDAL----EYTAAAGGAAFIIGKEE 168 (347)
T ss_pred CEEEEEEEeeeccCC---CCCC----CCcCCCCcEEEEEecCc
Confidence 999999999853322 2322 24689999999999643
No 30
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=99.91 E-value=4.6e-23 Score=200.21 Aligned_cols=170 Identities=21% Similarity=0.317 Sum_probs=142.5
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhHH
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMD 162 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~ 162 (365)
..|+|.++++|+|+++ ++++++.+..+. +++ ++.+++||++|+.+.++ +...
T Consensus 2 ~~v~I~ai~~~lP~~~---~~~~~~~~~~~~----~~~------~i~~~~gi~~r~~~~~~---------------~~~~ 53 (319)
T PRK09352 2 MYAKILGTGSYLPERV---VTNDDLEKMVDT----SDE------WIVTRTGIKERRIAAPD---------------ETTS 53 (319)
T ss_pred CceEEEEEEEECCCeE---EcHHHHHHHcCC----CHH------HhhhhcCeEEEEeCCCC---------------CCHH
Confidence 3689999999999999 999999987642 222 57789999999875433 2356
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHccc
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~ss-~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~ 241 (365)
+|+.+|++++|+++|++++|||.+|+.++ .+...|+.+..++.++|+++ ++.+++++ ||++|+.||..|.+++++|+
T Consensus 54 ~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~~-~~~~~v~~-~Casg~~al~~A~~~i~~g~ 131 (319)
T PRK09352 54 DLATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAKN-AAAFDLSA-ACSGFVYALSTADQFIRSGA 131 (319)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCCC-CcEeeccc-cchhHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999998544 45558899999999999965 89999987 99999999999999999999
Q ss_pred CCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeeccc
Q 017814 242 NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 242 ~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
.++|||+++|.++..++. .++.. ..+|||||+|+||++++.
T Consensus 132 ~~~vLvv~~e~~s~~~~~-~~~~~---~~~~gDGaaA~ll~~~~~ 172 (319)
T PRK09352 132 YKNVLVIGAEKLSRIVDW-TDRST---CVLFGDGAGAVVLGASEE 172 (319)
T ss_pred CCEEEEEEehhhccccCc-ccCCc---eEEEeccceEEEEEEcCC
Confidence 999999999998854422 23333 579999999999998765
No 31
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=99.91 E-value=5.6e-24 Score=210.47 Aligned_cols=166 Identities=15% Similarity=0.197 Sum_probs=140.1
Q ss_pred CeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhHHH
Q 017814 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (365)
Q Consensus 84 ~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~~ 163 (365)
++.|.+++.|+|++. ++++++.+..+. +++ ++.+++||++|+++.++ +...+
T Consensus 1 ~~~I~g~g~~lP~~~---v~n~~l~~~~~~----~~~------~i~~~~Gi~~r~v~~~~---------------~~~~~ 52 (345)
T TIGR00748 1 MAGIVGYGAYIPMYR---IKVEEIARVWGK----DPE------SISNGLPVEEKAVPGLD---------------EDTAT 52 (345)
T ss_pred CccEEEEEEeCCCee---ecHHHHHHHhCC----CHh------HeeeccceeeeecCCCC---------------CCHHH
Confidence 367999999999999 999999887542 233 57789999999986443 23569
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccC
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~s-s~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~ 242 (365)
|+.+|+++||+++|++|+|||.||+++ ++.+..|+.+..++++||+++++..+++.+ ||+|++.||++|.+++++|..
T Consensus 53 la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~~-aC~g~~~al~~A~~~i~sg~~ 131 (345)
T TIGR00748 53 IGVEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLEF-ACKAGTAGIQACMGLVASGMI 131 (345)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHHH-hHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999854 455667899999999999987799999998 999999999999999999999
Q ss_pred CeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeecc
Q 017814 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNR 285 (365)
Q Consensus 243 ~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~ 285 (365)
++||||++|.++.+. .++. ...|||||+|+||++.+
T Consensus 132 ~~vLVv~~d~~~~~~---~~~~----~~~~GDGAaA~vl~~~~ 167 (345)
T TIGR00748 132 KYGLAIGADTAQGAP---GDAL----EYTAGAGGAAYIIGEKN 167 (345)
T ss_pred CEEEEEEEeecccCC---CccC----cccCCCceEEEEEccCC
Confidence 999999999987432 2332 36789999999999654
No 32
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=99.89 E-value=5.7e-23 Score=199.35 Aligned_cols=166 Identities=19% Similarity=0.293 Sum_probs=140.8
Q ss_pred CeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhHHH
Q 017814 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (365)
Q Consensus 84 ~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~~ 163 (365)
+++|.++++|+|++. ++++++.+..+.. ++..++||++|++..+. +...+
T Consensus 1 ~v~I~~i~~~lP~~~---v~~~~~~~~~~~~------------~~~~~~gi~~r~~~~~~---------------~~~~~ 50 (324)
T cd00827 1 DVGIEAIGAYLPRYR---VDNEELAEGLGVD------------PGKYTTGIGQRHMAGDD---------------EDVPT 50 (324)
T ss_pred CccEEEEEecCCcee---ecHHHHHHHhCCC------------cceeeeecceeEecCCC---------------CCHHH
Confidence 478999999999999 9999998875421 46678999999986542 23568
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccC
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~ss-~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~ 242 (365)
|+.+|++++|+++|++++|||.||++++ .....|+.+.++++++|++ +++.+++++ ||++++.||.+|.+++++|..
T Consensus 51 l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~~-~C~s~~~al~~A~~~i~~g~~ 128 (324)
T cd00827 51 MAVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLKQ-ACYGGTAALQLAANLVESGPW 128 (324)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehhh-hhHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999998544 4445889999999999998 599999997 999999999999999999999
Q ss_pred CeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeeccc
Q 017814 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 243 ~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
++||||++|.++.... .+. ...++|||||+|+||+.++.
T Consensus 129 ~~vlvv~~e~~~~~~~--~~~---~~~~~~gdgaaA~ll~~~~~ 167 (324)
T cd00827 129 RYALVVASDIASYLLD--EGS---ALEPTLGDGAAAMLVSRNPG 167 (324)
T ss_pred CEEEEEEEHHhhhccc--CCC---CccccccCceEEEEEecCcc
Confidence 9999999999985442 111 23789999999999998765
No 33
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=99.88 E-value=8.1e-22 Score=197.49 Aligned_cols=163 Identities=13% Similarity=0.197 Sum_probs=136.8
Q ss_pred eEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhHHHH
Q 017814 85 CYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDEI 164 (365)
Q Consensus 85 v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~~L 164 (365)
|.|.+++.|+|+.. ++++++.+..+ .+++ |+....|+++|+..++. |+..+|
T Consensus 1 iGI~~i~~y~P~~~---v~~~ela~~~g----~~~~------~~~~g~G~~~~~~~~~~---------------ed~~~l 52 (379)
T TIGR01835 1 IGIDKISFFTPQNY---LDMTALAEARG----VDPE------KFHIGIGQKKMAVPPID---------------EDIVTM 52 (379)
T ss_pred CCEeEEEEECCCEE---eeHHHHHHHhC----CCHH------HHHhhcCceEEeeCCCC---------------CCHHHH
Confidence 46999999999999 99999998754 2333 67788999998764432 335799
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCC
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNK 243 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~-ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~ 243 (365)
+.+|+++||+++ +|+|||.||++ +++....|+.+..|++.||+++++.++|+.+ +|+||+.||++|.+++++++.+
T Consensus 53 a~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~~-aC~gg~~aL~~A~~~i~s~~~~ 129 (379)
T TIGR01835 53 AASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELKQ-ACYGATAALQMAKGHVALSPDR 129 (379)
T ss_pred HHHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEecc-ccHHHHHHHHHHHHHHHcCCCC
Confidence 999999999998 89999999995 5556667999999999999998899999999 9999999999999999999999
Q ss_pred eEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeecc
Q 017814 244 LAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNR 285 (365)
Q Consensus 244 ~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~ 285 (365)
+||||++|...... .+. ...+|||||+|+||++++
T Consensus 130 ~aLVv~~D~a~~~~---~~~----~~~~~GdGA~A~Ll~~~~ 164 (379)
T TIGR01835 130 KVLVIASDIAKYGL---ESP----GEPTQGAGAVAMLVSADP 164 (379)
T ss_pred eEEEEEeehhhccc---CCC----CCccccCccEEEEEecCC
Confidence 99999999864221 111 146899999999999764
No 34
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=99.87 E-value=1e-21 Score=200.40 Aligned_cols=167 Identities=16% Similarity=0.186 Sum_probs=137.3
Q ss_pred CCCCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhh
Q 017814 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSE 160 (365)
Q Consensus 81 r~~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~ 160 (365)
+|+++.|.++|.|+|+.. |+++++.++.+. +++ |+ ++||++|++..... .|+
T Consensus 1 ~~~~vgI~gig~Y~P~~~---v~n~eLa~~~g~----~~~------~~--~~GI~~r~~ava~~-------------~Ed 52 (459)
T PLN02577 1 MPKNVGILAMEVYFPPTC---VQQEALEAHDGV----SKG------KY--TIGLGQDCMAFCTD-------------VED 52 (459)
T ss_pred CCCccEEEEEEEeCCCeE---EcHHHHHHHhCC----CHH------HH--hhccceeEeccCCC-------------CCC
Confidence 477899999999999999 999999987642 344 43 68999998743211 145
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEe-ecCCCCCCcHHHHHH---HHcCCCCCceEEEecCCccchHHHHHHHHHHH
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRII---NRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~-ss~~~~~Ps~a~~v~---~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~l 236 (365)
+.+|+++|+++||+++|++|++||.||++ .|+....|+.+..|+ ++||.+ ++.++|+.+ +|+|++.||.+|.++
T Consensus 53 ~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~~-AC~G~~~AL~~A~~~ 130 (459)
T PLN02577 53 VISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDSTN-ACYGGTAALLNCVNW 130 (459)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehhh-hhHHHHHHHHHHHHH
Confidence 77999999999999999999999999995 555678999998886 678875 599999999 999999999999999
Q ss_pred HHccc--CCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeecc
Q 017814 237 FRTYK--NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNR 285 (365)
Q Consensus 237 l~ag~--~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~ 285 (365)
++++. .++||||++|..+..... . ...+||||+|+||+.++
T Consensus 131 i~sg~~~~~~aLVV~aD~a~~~~~~--~------e~t~GdGA~A~lv~~~~ 173 (459)
T PLN02577 131 VESSSWDGRYGLVVAADSAVYAEGP--A------RPTGGAGAVAMLVGPNA 173 (459)
T ss_pred HHcCCCCCCeEEEEEechhhccCCC--C------CCCCCcceEEEEEccCC
Confidence 99986 599999999997733211 1 23569999999998654
No 35
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=99.85 E-value=1.1e-20 Score=192.67 Aligned_cols=166 Identities=17% Similarity=0.270 Sum_probs=134.1
Q ss_pred CeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhHHH
Q 017814 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (365)
Q Consensus 84 ~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~~ 163 (365)
+|.|.+++.|+|+.. ++++++.++.+. +.+ |+ .+||++|+..... + .|+..+
T Consensus 1 ~vgI~~ig~y~P~~~---v~~~eLa~~~g~----~~~------k~--~~GI~~rr~av~~-----~--------~Ed~~t 52 (454)
T TIGR01833 1 DVGILALEIYFPSQY---VDQAELEKYDGV----SAG------KY--TIGLGQTKMGFCT-----D--------REDINS 52 (454)
T ss_pred CcEEEEEEEeCCCeE---EcHHHHHHhcCC----CHH------Hh--eechhheecccCC-----C--------CCCHHH
Confidence 478999999999999 999999876542 233 33 5899999852111 1 145679
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEE-eecCCCCCCcHHHHHHHHcCC--CCCceEEEecCCccchHHHHHHHHHHHHHcc
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVV-NVSLFSPAPSLTSRIINRYNL--RNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv-~ss~~~~~Ps~a~~v~~~LGL--~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag 240 (365)
|+.+|++++|+++|++|++||.||+ +.|+....|+.+.+|++.||+ .+++.++|+.+ +|+|++.||..|.++++++
T Consensus 53 ma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~~~~~fDi~~-AC~G~t~AL~~A~~~i~s~ 131 (454)
T TIGR01833 53 LCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDVEGIDTTN-ACYGGTAALFNAINWIESS 131 (454)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCCCceEEeccc-cchhHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999 456778899999999985543 34699999999 9999999999999999998
Q ss_pred c--CCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeeccc
Q 017814 241 K--NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 241 ~--~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
. .++||||++|..- + .+.+. ..++||||+|+||+.++.
T Consensus 132 ~~~~~~aLVV~sDia~--y---~~~~~---~~t~GaGAvAmLv~~~~~ 171 (454)
T TIGR01833 132 SWDGRYALVVAGDIAV--Y---AKGNA---RPTGGAGAVAMLIGPNAP 171 (454)
T ss_pred CcCCCeEEEEEecccc--c---cCCCe---eeccccceEEEEeccCcc
Confidence 5 5999999999932 2 11121 347899999999997765
No 36
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=99.70 E-value=3.2e-16 Score=154.94 Aligned_cols=166 Identities=16% Similarity=0.181 Sum_probs=139.7
Q ss_pred CeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhHHH
Q 017814 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMDE 163 (365)
Q Consensus 84 ~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~~ 163 (365)
++.|.+++.|.|..+ +.++|+.+.-+. +.+ ++....|++++.+.+. .|++..
T Consensus 2 ~iGI~~~g~y~p~~~---i~~~ela~~~g~----d~~------k~~~gl~~~e~sv~~~---------------~ED~vT 53 (377)
T COG3425 2 MIGIVGIGAYIPRYR---IKLEELARAWGV----DPE------KIKKGLGVEEKSVPPW---------------DEDAVT 53 (377)
T ss_pred ccccceEEEeccceE---eeHHHHHhhcCC----ChH------HhhhccccccccCCCC---------------chhHHH
Confidence 578999999999999 999999876432 233 6677789998865222 367889
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe-ecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccC
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~-ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~ 242 (365)
|+++|++++|++.++||++|+.|++. .|..+..-..+..|++.||+.+++.++|+.+ +|.+|..||+.|.+++.+++.
T Consensus 54 maveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~-AC~agT~aL~~a~~~v~s~~~ 132 (377)
T COG3425 54 MAVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEF-ACYAGTAALQAAIGWVESGMI 132 (377)
T ss_pred HHHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHH-HHHHHHHHHHHHHHHHHcCCc
Confidence 99999999999999999999999995 4556677889999999999999999999999 999999999999999999999
Q ss_pred CeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeecc
Q 017814 243 KLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNR 285 (365)
Q Consensus 243 ~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~ 285 (365)
+++|||++|+.--.. .+. .-...|+||+|+|++..+
T Consensus 133 ~~~LvI~sD~a~~~~---~~~----~E~t~GAGavA~lIg~n~ 168 (377)
T COG3425 133 SYGLVIGADTAQYAP---GDA----LEYTAGAGAVAFLIGKNP 168 (377)
T ss_pred cceEEEeehhhccCC---Ccc----cCccCCCceEEEEEccCC
Confidence 999999999875211 111 135689999999999763
No 37
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.69 E-value=3.2e-16 Score=146.51 Aligned_cols=107 Identities=14% Similarity=0.273 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHc
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss-~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~a 239 (365)
..+|+.+|++++|+++|++++|||.||++++ +....|+.+..+++.+|++ +.+++++.+ ||++++.||++|.+++++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~~-~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVNQ-ACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceecc-HhHHHHHHHHHHHHHHHC
Confidence 5689999999999999999999999999654 4455899999999999998 589999997 999999999999999999
Q ss_pred ccCCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeeccc
Q 017814 240 YKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 240 g~~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
+..++|||+++|. ++|||||+|+||++++.
T Consensus 85 g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~ 114 (254)
T cd00327 85 GKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEH 114 (254)
T ss_pred CCCCEEEEEecce-----------------eeecceEEEEEECcHHH
Confidence 9999999999998 68999999999998764
No 38
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.68 E-value=2.5e-16 Score=141.05 Aligned_cols=168 Identities=20% Similarity=0.239 Sum_probs=122.6
Q ss_pred CCCCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhh
Q 017814 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSE 160 (365)
Q Consensus 81 r~~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~ 160 (365)
||.+|.|.+++.|.|+.. ++++++.++-+. +.. |+....|.++..+.++ .|+
T Consensus 1 ~p~~VGI~~i~~y~p~~~---v~~~~La~~~g~----d~~------K~~~glgq~~~av~~~---------------~ED 52 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPRYY---VDQEELAEARGV----DPG------KYTIGLGQEKMAVPPP---------------DED 52 (174)
T ss_dssp --SSEEEEEEEEE-ESEE---EEHHHHHHHTTS-----TC------HHHTTT--SEEEE--T---------------TS-
T ss_pred CCccccEeEEEEecCceE---ecHHHHHHHhCC----CHH------HhhhhcCeeEEEeCCC---------------ccc
Confidence 689999999999999999 999998876432 222 3333344444444322 256
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEee-cCCCCCCcHHHHHHHHcCC--CCCceEEEecCCccchHHHHHHHHHHHH
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNL--RNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~s-s~~~~~Ps~a~~v~~~LGL--~~~v~~~~l~~mGCsgg~~AL~lA~~ll 237 (365)
+..|+..|++.+|++.+++|++|+.|++.+ |.....-+.+.+|++.||+ .+++..+++.+ +|.||..||..|.+++
T Consensus 53 ~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~-ACygGTaAL~~a~~~v 131 (174)
T PF01154_consen 53 IVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQ-ACYGGTAALQNAVNWV 131 (174)
T ss_dssp HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEES-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehhh-hhHHHHHHHHHHHHHH
Confidence 789999999999999999999999999953 4555677899999999999 56689999999 9999999999999999
Q ss_pred Hccc--CCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeecc
Q 017814 238 RTYK--NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNR 285 (365)
Q Consensus 238 ~ag~--~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~ 285 (365)
++++ .+++|||++|..-... +.. ...=|=||.|+|++.+.
T Consensus 132 ~s~~~~g~~aLVVasDiA~y~~--g~~------e~TqGAGAVAmLi~~na 173 (174)
T PF01154_consen 132 ASSPWDGRKALVVASDIARYDL--GSA------EPTQGAGAVAMLIGPNA 173 (174)
T ss_dssp CSTTSTTEEEEEEEEEEE--ST--TTT------GGG-EEEEEEEEEECS-
T ss_pred hcCCCCCCeEEEEeccccccCC--CCc------cccccceeEEEEecCCC
Confidence 9975 6799999999975221 111 24558899999998753
No 39
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.63 E-value=5.9e-15 Score=143.73 Aligned_cols=117 Identities=12% Similarity=0.211 Sum_probs=98.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHc
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~a 239 (365)
...+|+.+|+++||+++|++++|||.+|+.+.. ..+..+..++++||+ +.+++++ +|++++.||.+|..++++
T Consensus 49 Ae~eLa~eAa~~ALekAGL~~~DID~IIvGdl~--~Q~~~As~vA~~LGI----P~fdV~~-ACSTf~~AL~lAa~lI~S 121 (327)
T TIGR02845 49 AERKLMEDAVNLALKKANLKKDDVDFFLAGDLL--NQIITANFVARDLGI----PFLGLYG-ACSTSMETLALGAMLVDG 121 (327)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCC--CcccHHHHHHHHhCC----CEEEEec-cCHHHHHHHHHHHHHHhC
Confidence 346899999999999999999999999986532 255678899999996 4599999 999999999999999999
Q ss_pred ccCCeEEEEEeccCC-C--CCc-C---C-CCcchhhhhhhccCCeEEEEEeeccc
Q 017814 240 YKNKLAIVVSTESMG-P--NWY-C---G-REKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 240 g~~~~aLVV~~E~~S-~--~~~-~---~-~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
|..++|||+++|..| . .|+ + + +++.. ..+|+|||+|+||++.+.
T Consensus 122 G~ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~t---a~~tgdGAGA~vl~~~~~ 173 (327)
T TIGR02845 122 GFADRVLAATSSHYATAERQFRYPTEYGVQKPPT---AQWTVTGAGAVLLASTGG 173 (327)
T ss_pred CCCCEEEEEEecccchhhhhcccccccccCCCCe---eeEEEcccEEEEEeecCC
Confidence 999999999999887 2 121 1 2 34555 789999999999998754
No 40
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.54 E-value=1.9e-14 Score=139.72 Aligned_cols=123 Identities=16% Similarity=0.283 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHHHHhCCCC----CCCccEEEEeecCC-CC---------------------CCcHHHHHHHHcCCCCCce
Q 017814 161 MDEIIFDTLDKLFARTDIS----PSEIDVLVVNVSLF-SP---------------------APSLTSRIINRYNLRNDIK 214 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~----p~dID~LIv~ss~~-~~---------------------~Ps~a~~v~~~LGL~~~v~ 214 (365)
..+|+.+|+++||+++|++ ++|||.||+.++.+ .. .|+.+..++..+|++ .+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--g~ 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH--GP 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCC--CC
Confidence 4689999999999999999 99999999855443 22 688899999999993 68
Q ss_pred EEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCCCcC-----------C---CCcchhhhhhhccCCeEEEE
Q 017814 215 AFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYC-----------G---REKSMMLSNILFRSGGCSML 280 (365)
Q Consensus 215 ~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~~~~-----------~---~dr~~lv~~~LFgDGAAAvl 280 (365)
++++.+ ||++++.||+.|.+++++|..+++||+++|.++..+.. + ..-+.....++|||||+|+|
T Consensus 89 ~~~v~~-~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 AYDVSA-ACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred cccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 899997 99999999999999999999999999999987643211 0 00011224789999999999
Q ss_pred Eeeccc
Q 017814 281 LTNNRA 286 (365)
Q Consensus 281 Ls~~~~ 286 (365)
|++.+.
T Consensus 168 L~~~~~ 173 (332)
T cd00825 168 VEELEH 173 (332)
T ss_pred ECcHHH
Confidence 998664
No 41
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.51 E-value=7.1e-14 Score=136.57 Aligned_cols=116 Identities=14% Similarity=0.220 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcc
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag 240 (365)
..+|+.+|+++||+++|++++|||.+|+.... ..+..+..+++.||+ +.+++++ +|+++..||.+|..++++|
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID~lI~Gdll--~Q~~sAs~vA~~LGI----Pa~dV~g-ACST~~~AL~lAa~lI~SG 128 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDIDYLLAGDLL--NQIISANFAARELGI----PFLGLYG-ACSTMMESLALGSMLIDGG 128 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECCC--CCcchHHHHHHHhCC----cEEEEec-cCHHHHHHHHHHHHHHhcC
Confidence 45899999999999999999999999986543 345778899999996 6899999 9999999999999999999
Q ss_pred cCCeEEEEEeccCCC---CCcC----CC-CcchhhhhhhccCCeEEEEEeeccc
Q 017814 241 KNKLAIVVSTESMGP---NWYC----GR-EKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 241 ~~~~aLVV~~E~~S~---~~~~----~~-dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
..++|||+++|..+. .|+. ++ .+.. ...++|||+|+||+++..
T Consensus 129 ~ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp~t---aqwtvtGAGA~i~~~~~~ 179 (337)
T PRK08304 129 FADRVLAATSSHFATAERQFRFPTEYGGQRPPT---AQWTVTGAGAVLLSREGS 179 (337)
T ss_pred CCCEEEEEEcchhhhhhhhccCchhccccCCCc---ceEEeeccEEEEEecCCC
Confidence 999999999998873 2432 22 3333 789999999999998754
No 42
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.39 E-value=3.3e-12 Score=126.82 Aligned_cols=179 Identities=13% Similarity=0.101 Sum_probs=125.1
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHH-----HHHHHHHhCcceEEeecCCCcCCCCCCcchHHh
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRF-----LLKNMVSSGIGEETYGPRNVVEGREESPSLAEA 157 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~-----~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~ 157 (365)
++++|++.+...|=-. +.++....++. +-.+.+...+ -++|..++|+.+|++. .
T Consensus 3 ~~v~I~~~g~vs~lG~----~~~~~~aa~ra-gi~~~~~~~~~~~~~~~~i~~~~~~~~~~~~----------------~ 61 (348)
T PRK06147 3 RALAIVGSGMVTAVGL----DAPSSCAAIRA-RLDNFQETRFIDPPGGEWLIGAPVPLPPPWR----------------G 61 (348)
T ss_pred CceEEEecceeecCcC----CHHHHHHHHHc-ccccccccccccCCCCCceEeecCcCCcccC----------------c
Confidence 4699999999999875 55555554432 1001110000 0133344444444321 1
Q ss_pred hhhHHHHHHHHHHHHHHhCC-CCCCCccEEEEeec------CCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHH
Q 017814 158 FSEMDEIIFDTLDKLFARTD-ISPSEIDVLVVNVS------LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAV 230 (365)
Q Consensus 158 ~e~a~~La~~A~~~aL~~ag-i~p~dID~LIv~ss------~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL 230 (365)
.+...+|+..|++++|++++ .++++||.+|+.++ +....|.....++.++|+....+.+++.. ||++++.||
T Consensus 62 ~~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~~-~casg~~Al 140 (348)
T PRK06147 62 PERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIAR-GRVSGAVAL 140 (348)
T ss_pred hHHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCcccccc-cchHHHHHH
Confidence 23466899999999999999 79999999998533 11223456778999999965567899999 999999999
Q ss_pred HHHHHHHHcccCCeEEEEEeccCCCC----CcC------CCCcchhhhhhhccCCeEEEEEeeccc
Q 017814 231 DLVQQLFRTYKNKLAIVVSTESMGPN----WYC------GREKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 231 ~lA~~ll~ag~~~~aLVV~~E~~S~~----~~~------~~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
..|.++|+.|..+.+||+++|.++.. ++. .+++.. ..+|||||+++||++.+.
T Consensus 141 ~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~~---G~v~GEGA~a~vLe~~~~ 203 (348)
T PRK06147 141 AQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNSN---GFIPGEAAAAVLLGRPAG 203 (348)
T ss_pred HHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCCC---ceeeeceEEEEEEccHhh
Confidence 99999999999999999999987631 110 122223 689999999999998654
No 43
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.34 E-value=1.1e-11 Score=123.97 Aligned_cols=184 Identities=12% Similarity=0.172 Sum_probs=120.0
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcc-cCChhHHHHHHHHHHHhCcceEEee-cCCCc---CCCCCCcchHHh
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEETYG-PRNVV---EGREESPSLAEA 157 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~R~~~-~~~~~---~~~~~~~s~~~~ 157 (365)
++|+|+|+++..|.-. +.+++.+.+.... .+.+-. . ++..+...+... .+... ..++ .....
T Consensus 1 ~~i~I~G~g~~~p~g~----~~~~~~~~l~~g~~~~~~~~--~----~~~~~~~~~~~~~i~~~~~~~~~~~---~~~~~ 67 (406)
T cd00834 1 RRVVITGLGAVTPLGN----GVEEFWEALLAGRSGIRPIT--R----FDASGFPSRIAGEVPDFDPEDYLDR---KELRR 67 (406)
T ss_pred CcEEEECcceeCCCcC----CHHHHHHHHHcCCCeeEECC--c----ccccCCCccEEEEcCCCChhhcCCH---HHhcc
Confidence 3789999999999885 8888888764321 000000 0 001111111110 11110 0111 11122
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCccE----EEEe-ecCC--------------------------CCCCcHHHHHHHH
Q 017814 158 FSEMDEIIFDTLDKLFARTDISPSEIDV----LVVN-VSLF--------------------------SPAPSLTSRIINR 206 (365)
Q Consensus 158 ~e~a~~La~~A~~~aL~~agi~p~dID~----LIv~-ss~~--------------------------~~~Ps~a~~v~~~ 206 (365)
......|+.+|+++||+++|+++++||. +++. +... ...+..+..|+..
T Consensus 68 ~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 147 (406)
T cd00834 68 MDRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIR 147 (406)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHH
Confidence 3456789999999999999999876654 4443 2211 1124577889999
Q ss_pred cCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCC----------------------Cc-CCCCc
Q 017814 207 YNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------------------WY-CGREK 263 (365)
Q Consensus 207 LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~----------------------~~-~~~dr 263 (365)
+|++. +.+.+.. ||++++.||..|.++|++|..++|||+++|..+.. .. ++.++
T Consensus 148 lgl~g--~~~~v~~-acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~ 224 (406)
T cd00834 148 LGLRG--PNYTVST-ACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDR 224 (406)
T ss_pred hCCCC--cccccch-HHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCC
Confidence 99965 7889999 99999999999999999999999999999987610 00 01112
Q ss_pred chhhhhhhccCCeEEEEEeeccc
Q 017814 264 SMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 264 ~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
+ ..++||||+|+||++.+.
T Consensus 225 ~----g~~~geGA~a~vL~~~~~ 243 (406)
T cd00834 225 D----GFVLGEGAGVLVLESLEH 243 (406)
T ss_pred C----CEeeeccEEEEEEecHHH
Confidence 2 578999999999997654
No 44
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.29 E-value=8.5e-12 Score=125.35 Aligned_cols=94 Identities=17% Similarity=0.247 Sum_probs=84.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss-~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
...+|+.+|+++||+++|++++|||.+|+.++ .....|..+..++.++|++++++.++++. +|++++.+|..|..+++
T Consensus 21 ~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~~-~c~s~~~al~~A~~~I~ 99 (386)
T cd00751 21 SADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVNR-VCGSGLQAVALAAQSIA 99 (386)
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhcc-ccHHHHHHHHHHHHHHH
Confidence 45799999999999999999999999998543 44456788888999999986689999999 99999999999999999
Q ss_pred cccCCeEEEEEeccCC
Q 017814 239 TYKNKLAIVVSTESMG 254 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S 254 (365)
+|..++|||+++|.+|
T Consensus 100 sG~~~~vLv~g~e~~s 115 (386)
T cd00751 100 AGEADVVVAGGVESMS 115 (386)
T ss_pred CCCCCeEEEeeeeccc
Confidence 9999999999999875
No 45
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.27 E-value=9.4e-12 Score=98.10 Aligned_cols=65 Identities=18% Similarity=0.408 Sum_probs=52.6
Q ss_pred EEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeecc
Q 017814 216 FNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNR 285 (365)
Q Consensus 216 ~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~ 285 (365)
||+++ +|++++.||++|..+++++..++||||++|..+..... .++.. ..+|||||+|+||++++
T Consensus 1 fDi~~-~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~~~~-~~~~~---~~~~gDgAaA~vl~~~~ 65 (80)
T PF08545_consen 1 FDINQ-ACAGFLYALDVAAALIASGRAKNALVVGGDRLSRIVDR-TDRQT---AFIFGDGAAAVVLSRDE 65 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGGSHT-THHHH---HTTB-EEEEEEEEEEES
T ss_pred Ccccc-cchHHHHHHHHHHHHHhhccCCEEEEEeeccccccccc-cccCc---ceeecchheEEEEEecC
Confidence 78999 99999999999999999999999999999999852211 23333 67999999999999974
No 46
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.26 E-value=2.4e-11 Score=122.62 Aligned_cols=95 Identities=17% Similarity=0.270 Sum_probs=84.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss-~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
...+|+.+|+++||+++|++|+|||.+|+.++ .....|..+..++.++|++..++.++++. +|++|+.++..|.++++
T Consensus 25 ~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~~-~Casg~~ai~~A~~~I~ 103 (393)
T PRK05656 25 PAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLNK-VCGSGLKALHLAAQAIR 103 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEecc-cchhHHHHHHHHHHHHH
Confidence 35799999999999999999999999999544 33346677888999999986689999999 99999999999999999
Q ss_pred cccCCeEEEEEeccCCC
Q 017814 239 TYKNKLAIVVSTESMGP 255 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S~ 255 (365)
+|..+++||+++|.+|.
T Consensus 104 sG~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 104 CGDAEVIIAGGQENMSL 120 (393)
T ss_pred cCCCCEEEEEEEhhhcc
Confidence 99999999999998873
No 47
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.25 E-value=2.2e-11 Score=122.55 Aligned_cols=95 Identities=18% Similarity=0.291 Sum_probs=84.3
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHH
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss-~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll 237 (365)
+...+|+.+|+++||+++|++++|||.+|+.+. .....|..+..++..+|++.++++++++. +|++++.++..|..++
T Consensus 19 ~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~~-~Casg~~al~~A~~~I 97 (386)
T TIGR01930 19 VSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVNR-QCASGLQAVILAAQLI 97 (386)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeecc-hhhHHHHHHHHHHHHH
Confidence 346799999999999999999999999998543 33445777888999999986689999998 9999999999999999
Q ss_pred HcccCCeEEEEEeccCC
Q 017814 238 RTYKNKLAIVVSTESMG 254 (365)
Q Consensus 238 ~ag~~~~aLVV~~E~~S 254 (365)
++|.+++|||+++|.+|
T Consensus 98 ~sG~~~~vLv~g~e~~s 114 (386)
T TIGR01930 98 RAGEADVVVAGGVESMS 114 (386)
T ss_pred HCCCCCEEEEEEehhhc
Confidence 99999999999999866
No 48
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.25 E-value=2.5e-11 Score=122.52 Aligned_cols=94 Identities=13% Similarity=0.205 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEe-ecCCCCCC-cHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAP-SLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~-ss~~~~~P-s~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll 237 (365)
.+.+|+.+|+++||+++|++|+|||.+|+. +......| ..+..++.++|++.++++++++. +|++|+.|+..|..++
T Consensus 26 ~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~~-aCaSg~~Al~~A~~~I 104 (392)
T PRK07108 26 HGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVNR-FCSSGLQTIALAAQRV 104 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeecc-hhhHHHHHHHHHHHHH
Confidence 357999999999999999999999999994 44444444 48889999999997799999999 9999999999999999
Q ss_pred HcccCCeEEEEEeccCC
Q 017814 238 RTYKNKLAIVVSTESMG 254 (365)
Q Consensus 238 ~ag~~~~aLVV~~E~~S 254 (365)
++|..+.+|++++|++|
T Consensus 105 ~sG~~d~vlagGvE~ms 121 (392)
T PRK07108 105 IAGEGDVFVAGGVESIS 121 (392)
T ss_pred HCCCCCEEEEEEEeccC
Confidence 99999999999999998
No 49
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.24 E-value=2.3e-11 Score=123.13 Aligned_cols=94 Identities=21% Similarity=0.259 Sum_probs=85.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~s-s~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
...+|+.+|+++||+++|++|+|||.+|+.+ ......|..+..++..+|++++++.++++. +|++|+.|+..|.++++
T Consensus 25 ~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~~-~CaSg~~Al~~A~~~I~ 103 (404)
T PRK06205 25 PAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLDR-RCGSGLQAVITAAMQVQ 103 (404)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehhh-hhhHHHHHHHHHHHHHH
Confidence 4679999999999999999999999999854 445556888888999999986799999999 99999999999999999
Q ss_pred cccCCeEEEEEeccCC
Q 017814 239 TYKNKLAIVVSTESMG 254 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S 254 (365)
+|..+.|||+++|.+|
T Consensus 104 sG~~d~vLv~G~E~ms 119 (404)
T PRK06205 104 TGAADVVIAGGAESMS 119 (404)
T ss_pred cCCCCEEEEeeehhhc
Confidence 9999999999999987
No 50
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.22 E-value=3.6e-11 Score=121.37 Aligned_cols=94 Identities=14% Similarity=0.231 Sum_probs=83.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecC-CCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSL-FSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~-~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
...+|+.+|+++||+++|++|+|||.+|+.+.. ....+..+..++..+|++.+++.++++. +|++|+.|+..|..+++
T Consensus 25 ~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~~-~CaSg~~Al~~A~~~I~ 103 (393)
T PRK08235 25 KATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVNK-VCASGLRAVTLADQIIR 103 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehhh-hhhHHHHHHHHHHHHHH
Confidence 457999999999999999999999999995432 2224556667899999986799999999 99999999999999999
Q ss_pred cccCCeEEEEEeccCC
Q 017814 239 TYKNKLAIVVSTESMG 254 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S 254 (365)
+|..++|||+++|.+|
T Consensus 104 sG~~d~vLvvG~E~ms 119 (393)
T PRK08235 104 AGDASVIVAGGMESMS 119 (393)
T ss_pred CCCCCEEEEEeeeccc
Confidence 9999999999999988
No 51
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.22 E-value=1.3e-10 Score=117.49 Aligned_cols=121 Identities=15% Similarity=0.202 Sum_probs=94.6
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCcc----EEEEeecC-CCC-------------------CCcHHHHHHHHcCCCCCce
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEID----VLVVNVSL-FSP-------------------APSLTSRIINRYNLRNDIK 214 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID----~LIv~ss~-~~~-------------------~Ps~a~~v~~~LGL~~~v~ 214 (365)
.....|+..|+++||+++|+++++|| .||+.++. .+. .+..+..++..+|+++ +
T Consensus 85 ~~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~g--~ 162 (424)
T smart00825 85 DPQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLRG--P 162 (424)
T ss_pred CHHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCCC--C
Confidence 44567999999999999999999998 67764321 111 3456778999999976 7
Q ss_pred EEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCC----------C-c-------CCCCcchhhhhhhccCCe
Q 017814 215 AFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------W-Y-------CGREKSMMLSNILFRSGG 276 (365)
Q Consensus 215 ~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~----------~-~-------~~~dr~~lv~~~LFgDGA 276 (365)
.+++.. +|++++.||..|.++|++|..++|||+++|..... + . ++.++ ...++||||
T Consensus 163 ~~~v~~-acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~----~g~~~geGA 237 (424)
T smart00825 163 SVTVDT-ACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDADA----DGYVRGEGV 237 (424)
T ss_pred cccccc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCCC----CcccccceE
Confidence 899999 99999999999999999999999999999974310 0 0 01112 267899999
Q ss_pred EEEEEeeccc
Q 017814 277 CSMLLTNNRA 286 (365)
Q Consensus 277 AAvlLs~~~~ 286 (365)
+|+||+..+.
T Consensus 238 aalVLe~~e~ 247 (424)
T smart00825 238 GVVVLKRLSD 247 (424)
T ss_pred EEEEEccHHH
Confidence 9999997654
No 52
>PRK09051 beta-ketothiolase; Provisional
Probab=99.21 E-value=5.2e-11 Score=120.26 Aligned_cols=94 Identities=18% Similarity=0.202 Sum_probs=82.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEee-cCCCCC-CcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPA-PSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~s-s~~~~~-Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll 237 (365)
...+|+.+|+++||+++|++|+|||.+|+.+ +..... +..+..++..+|++++++.++++. +|++|+.|+..|.+++
T Consensus 26 ~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~~-aCaSg~~Al~~A~~~I 104 (394)
T PRK09051 26 APTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVNR-LCGSGLQAIVSAAQAI 104 (394)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEecc-cchHHHHHHHHHHHHH
Confidence 4579999999999999999999999999954 333333 446666777889986699999999 9999999999999999
Q ss_pred HcccCCeEEEEEeccCC
Q 017814 238 RTYKNKLAIVVSTESMG 254 (365)
Q Consensus 238 ~ag~~~~aLVV~~E~~S 254 (365)
++|..++|||+++|.+|
T Consensus 105 ~sG~~d~vLvvG~E~mS 121 (394)
T PRK09051 105 LLGDADVAIGGGAESMS 121 (394)
T ss_pred HcCCCCEEEEEeehhcc
Confidence 99999999999999987
No 53
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.17 E-value=1.1e-10 Score=118.36 Aligned_cols=94 Identities=17% Similarity=0.241 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeec-CCCC-CCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSP-APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss-~~~~-~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll 237 (365)
.+.+|+.+|++++|+++|++|+|||.+|+.+. +... .+..+...+..+|++++++.++++. +|++|+.|+..|.+++
T Consensus 27 ~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn~-aCaSg~~Ai~~A~~~I 105 (402)
T PRK08242 27 KPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQINR-FCASGLEAVNLAAAKV 105 (402)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEcc-hhhhHHHHHHHHHHHH
Confidence 36799999999999999999999999999543 3333 3456667778899987799999999 9999999999999999
Q ss_pred HcccCCeEEEEEeccCC
Q 017814 238 RTYKNKLAIVVSTESMG 254 (365)
Q Consensus 238 ~ag~~~~aLVV~~E~~S 254 (365)
++|..+++|++++|.+|
T Consensus 106 ~sG~~d~vLv~G~E~mS 122 (402)
T PRK08242 106 RSGWDDLVIAGGVESMS 122 (402)
T ss_pred HcCCCCEEEEEEEEccC
Confidence 99999999999999998
No 54
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.17 E-value=9.9e-11 Score=118.45 Aligned_cols=94 Identities=18% Similarity=0.217 Sum_probs=80.4
Q ss_pred hHHHHHHHHHHHHHHhC-CCCCCCccEEEEe-ecCCCCCCcHHHH-HHHHcCCCCCceEEEecCCccchHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFART-DISPSEIDVLVVN-VSLFSPAPSLTSR-IINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~a-gi~p~dID~LIv~-ss~~~~~Ps~a~~-v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~l 236 (365)
...+|+.+|+++||+++ |++|+|||.+|+. +......|...+. +...+|++..++.++++. +|++|+.|+..|..+
T Consensus 30 s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~-aCaSg~~Al~~A~~~ 108 (399)
T PRK09052 30 RPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVNR-FCASGLQAVAMAADR 108 (399)
T ss_pred CHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeecc-hhhHHHHHHHHHHHH
Confidence 46799999999999997 9999999999995 4434444555555 455569985589999999 999999999999999
Q ss_pred HHcccCCeEEEEEeccCC
Q 017814 237 FRTYKNKLAIVVSTESMG 254 (365)
Q Consensus 237 l~ag~~~~aLVV~~E~~S 254 (365)
+++|..++|||+++|.+|
T Consensus 109 I~sG~~d~vLv~G~E~mS 126 (399)
T PRK09052 109 IRVGEADVMIAAGVESMS 126 (399)
T ss_pred HHCCCCCEEEEEEEeccc
Confidence 999999999999999886
No 55
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.15 E-value=7.6e-10 Score=108.00 Aligned_cols=118 Identities=12% Similarity=0.221 Sum_probs=91.9
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
+...+|+.+|+++||+++|++++|||.+++.+......|+ ..++++||+ +.+++.+ +|+++..||.+|..+++
T Consensus 52 kAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGI----P~~gV~g-ACSTg~eAL~lAa~~Va 124 (334)
T PRK12404 52 KAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGI----PYLGLFG-ACSTSMEGLALAALIVN 124 (334)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCC----Cccceee-cCHHHHHHHHHHHHHHH
Confidence 4456899999999999999999999999996655555554 489999994 4499999 99999999999999999
Q ss_pred cccCCeEEEEEeccCC---CCCcC----CCCcchhhhhhhccCCeEEEEEeecc
Q 017814 239 TYKNKLAIVVSTESMG---PNWYC----GREKSMMLSNILFRSGGCSMLLTNNR 285 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S---~~~~~----~~dr~~lv~~~LFgDGAAAvlLs~~~ 285 (365)
+|..++||++++--.+ ..|+. ++.|.. +...---||+|+||+++.
T Consensus 125 SG~Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp~--taqwTvTgaga~~l~~~~ 176 (334)
T PRK12404 125 SGGAKYVLTGASSHNAAVEKQFRYPTEYGGQKPP--TAQWTVTGAGAAILSKTG 176 (334)
T ss_pred cCCCCEEEEEeCcccchhhhhccCcccccCcCCC--cccEEEEceEEEEEecCC
Confidence 9999999999765443 22322 222221 134456689999998764
No 56
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=99.15 E-value=1.5e-10 Score=118.10 Aligned_cols=95 Identities=13% Similarity=0.266 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss-~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
...+|+.+|+++||+++|++++|||.+|+.+. .....++.+..++..+|++.+++.++++. +|++++.++..|.++++
T Consensus 26 ~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~~-~CaSg~~al~~A~~~I~ 104 (426)
T PRK08170 26 SASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQR-NCASGMQALDSAAANIA 104 (426)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeeccc-hhhHHHHHHHHHHHHHH
Confidence 35799999999999999999999999998533 22234677888999999976699999999 99999999999999999
Q ss_pred cccCCeEEEEEeccCCC
Q 017814 239 TYKNKLAIVVSTESMGP 255 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S~ 255 (365)
+|..++|||+++|.+|.
T Consensus 105 sG~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 105 LGRADLVLAGGVEAMSH 121 (426)
T ss_pred CCCCCEEEEEEEecccC
Confidence 99999999999998873
No 57
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=99.15 E-value=1.6e-10 Score=110.79 Aligned_cols=95 Identities=16% Similarity=0.278 Sum_probs=82.8
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~s-s~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
.+.+|+.+|++++|+++|++|++||.+|+.+ ......+..+..++-..|++.+++.+.++. .|++|+.|+..|...++
T Consensus 25 ~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~~-~CaSG~~Av~~a~~~I~ 103 (264)
T PF00108_consen 25 SPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVNR-ACASGLQAVHLAAMAIA 103 (264)
T ss_dssp -HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeehh-hhhHHHHHHHHhhhhhc
Confidence 4679999999999999999999999999954 333447778888889999998899999999 99999999999999999
Q ss_pred cccCCeEEEEEeccCCC
Q 017814 239 TYKNKLAIVVSTESMGP 255 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S~ 255 (365)
+|..+.+|++|+|.+|.
T Consensus 104 sG~~dvvlagGvE~mS~ 120 (264)
T PF00108_consen 104 SGEADVVLAGGVESMSR 120 (264)
T ss_dssp TTS-SEEEEEEEEETTT
T ss_pred CCCccEEEEeccccccc
Confidence 99999999999999994
No 58
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.15 E-value=1.5e-10 Score=116.24 Aligned_cols=93 Identities=13% Similarity=0.237 Sum_probs=80.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCC-CCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLF-SPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~-~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
...+|+.+|+++||+++|++++|||.+|+.++.. ...+..+..++..+|+++ .+.++++. +|++++.||..|..+++
T Consensus 20 ~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~-~~~~~v~~-~casg~~al~~A~~~I~ 97 (385)
T PRK12578 20 SVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLTG-KVPLRVEA-MCATGLAASLTAYTAVA 97 (385)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCCC-CCeeEEec-cCHHHHHHHHHHHHHHH
Confidence 3569999999999999999999999999854432 122345788999999987 67799998 99999999999999999
Q ss_pred cccCCeEEEEEeccCC
Q 017814 239 TYKNKLAIVVSTESMG 254 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S 254 (365)
+|..++|||+++|.+|
T Consensus 98 sG~~~~vLvvg~e~~s 113 (385)
T PRK12578 98 SGLVDMAIAVGVDKMT 113 (385)
T ss_pred CCCCCEEEEEEEeecc
Confidence 9999999999999876
No 59
>PRK06059 lipid-transfer protein; Provisional
Probab=99.14 E-value=1.6e-10 Score=116.77 Aligned_cols=92 Identities=10% Similarity=0.070 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeecC--CCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSL--FSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss~--~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
..+|+.+|+++||+++|++++|||.||+.++. ....|..+..+++++|+++ ++.+++++ +|++++.+|..|.++++
T Consensus 23 ~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~~-~~~~~v~~-~Casg~~al~~A~~~I~ 100 (399)
T PRK06059 23 FVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWNG-APVSSSYA-ACASGSQALQSARAQIL 100 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCCC-Cceecccc-hhHHHHHHHHHHHHHHH
Confidence 46999999999999999999999999985432 2333556788999999976 88999999 99999999999999999
Q ss_pred cccCCeEEEEEeccCC
Q 017814 239 TYKNKLAIVVSTESMG 254 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S 254 (365)
+|..++|||+++|.++
T Consensus 101 sG~~~~vLvvg~e~~s 116 (399)
T PRK06059 101 AGLCDVALVVGADTTP 116 (399)
T ss_pred CCCCCEEEEEEEcccC
Confidence 9999999999999876
No 60
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.14 E-value=5.9e-10 Score=112.06 Aligned_cols=123 Identities=18% Similarity=0.206 Sum_probs=93.4
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccE----EEEeec-CC-------------------CCCCcHHHHHHHHcCCCCCce
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDV----LVVNVS-LF-------------------SPAPSLTSRIINRYNLRNDIK 214 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~----LIv~ss-~~-------------------~~~Ps~a~~v~~~LGL~~~v~ 214 (365)
.....|+.+|+++||+++|++++++|. +++.++ .. ...+..+..++..+|++. +
T Consensus 85 ~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~g--~ 162 (421)
T cd00833 85 DPQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLRG--P 162 (421)
T ss_pred CHHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCCC--C
Confidence 456789999999999999999888774 555322 11 012446778999999975 8
Q ss_pred EEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCC-----------------CcCCCCcchhhhhhhccCCeE
Q 017814 215 AFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN-----------------WYCGREKSMMLSNILFRSGGC 277 (365)
Q Consensus 215 ~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~-----------------~~~~~dr~~lv~~~LFgDGAA 277 (365)
.+.+.+ +|++++.||..|.++|++|..+.+||+++|.++.. ..+-+.+. ...++||||+
T Consensus 163 ~~~v~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~~---~g~~~geGAa 238 (421)
T cd00833 163 SLTVDT-ACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDADA---DGYVRGEGVG 238 (421)
T ss_pred ceeecc-HhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCCC---CCeeeeceEE
Confidence 899999 99999999999999999999999999999986310 00001111 2578999999
Q ss_pred EEEEeecccc
Q 017814 278 SMLLTNNRAL 287 (365)
Q Consensus 278 AvlLs~~~~~ 287 (365)
|+||++.+..
T Consensus 239 alvL~~~~~A 248 (421)
T cd00833 239 VVVLKRLSDA 248 (421)
T ss_pred EEEEeeHHHH
Confidence 9999986543
No 61
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.12 E-value=2.2e-10 Score=115.42 Aligned_cols=93 Identities=12% Similarity=0.085 Sum_probs=79.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCC--CCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSP--APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~--~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll 237 (365)
+..+|+.+|+++||+++|++++|||.+|+.+++... .+..+..++++||+.+ .+.+++++ +|++|..++..|..++
T Consensus 23 s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~~-~~~~~v~~-~casg~~al~~A~~~I 100 (386)
T PRK08313 23 SMAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGATG-KPLIRVHT-AGSVGGSTAVVAASLV 100 (386)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCCC-CceEEEec-cCHHHHHHHHHHHHHH
Confidence 356999999999999999999999999986433211 1233468999999986 88999999 9999999999999999
Q ss_pred HcccCCeEEEEEeccCC
Q 017814 238 RTYKNKLAIVVSTESMG 254 (365)
Q Consensus 238 ~ag~~~~aLVV~~E~~S 254 (365)
++|..++||||++|.++
T Consensus 101 ~sG~~~~vLVvg~e~~s 117 (386)
T PRK08313 101 QSGVYRRVLAVAWEKQS 117 (386)
T ss_pred HCCCCCEEEEEEEEEcc
Confidence 99999999999999764
No 62
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.11 E-value=2.6e-10 Score=115.27 Aligned_cols=93 Identities=13% Similarity=0.173 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeecC-CCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHc
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSL-FSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss~-~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~a 239 (365)
..+|+.+|++++|+++|++|+|||.+|+.++. ....++.....+..+|++.+++.++++. +|++|+.|+..|.+++++
T Consensus 31 ~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~~-aCaSG~~Av~~A~~~I~s 109 (397)
T PRK06954 31 APQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVNK-MCGSGMRAAMFAHDMLVA 109 (397)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeeccc-cchHHHHHHHHHHHHHHC
Confidence 56999999999999999999999999995433 2223344444556678887799999999 999999999999999999
Q ss_pred ccCCeEEEEEeccCC
Q 017814 240 YKNKLAIVVSTESMG 254 (365)
Q Consensus 240 g~~~~aLVV~~E~~S 254 (365)
|.++++||+++|.+|
T Consensus 110 G~~d~vLv~G~E~ms 124 (397)
T PRK06954 110 GSVDVIVAGGMESMT 124 (397)
T ss_pred CCCCEEEEEeeeccC
Confidence 999999999999988
No 63
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.10 E-value=3e-10 Score=113.14 Aligned_cols=93 Identities=16% Similarity=0.126 Sum_probs=83.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss-~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
+..+|+.+|+++||+++|++++|||.+++.++ .....|..+..++.++|++ +++.++++. +|+++..++..|..+++
T Consensus 15 ~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~~-~c~sg~~al~~Aa~~I~ 92 (375)
T cd00829 15 SPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVEA-AGASGSAAVRAAAAAIA 92 (375)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEeC-ccHHHHHHHHHHHHHHH
Confidence 46799999999999999999999999998543 3333577889999999997 599999998 99999999999999999
Q ss_pred cccCCeEEEEEeccCC
Q 017814 239 TYKNKLAIVVSTESMG 254 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S 254 (365)
+|..+.|||+++|.++
T Consensus 93 sG~~~~vlv~g~e~~s 108 (375)
T cd00829 93 SGLADVVLVVGAEKMS 108 (375)
T ss_pred hCCCCEEEEEEEeecc
Confidence 9999999999999877
No 64
>PRK05790 putative acyltransferase; Provisional
Probab=99.10 E-value=3.7e-10 Score=113.82 Aligned_cols=94 Identities=16% Similarity=0.250 Sum_probs=80.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss-~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
...+|+.+|+++||+++|++|+|||.+|+.++ .....+..+..++..+|+..+++.++++. +|++++.|+..|..+++
T Consensus 25 ~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~~-~Casg~~al~~A~~~I~ 103 (393)
T PRK05790 25 SAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTINK-VCGSGLKAVALAAQAIR 103 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeecc-cchHHHHHHHHHHHHHH
Confidence 46799999999999999999999999998543 22234455556777889985689999999 99999999999999999
Q ss_pred cccCCeEEEEEeccCC
Q 017814 239 TYKNKLAIVVSTESMG 254 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S 254 (365)
+|..++|||+++|.+|
T Consensus 104 sG~~d~vLv~G~e~~s 119 (393)
T PRK05790 104 AGDADIVVAGGQESMS 119 (393)
T ss_pred cCCCCEEEEEeeeccc
Confidence 9999999999999864
No 65
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=99.07 E-value=5.7e-10 Score=112.73 Aligned_cols=92 Identities=11% Similarity=0.043 Sum_probs=81.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCC--CCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLF--SPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~--~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll 237 (365)
...+|+.+|+++||+++|++++|||.+|+.+... ...+..+..+++.+|+.+ .+.+++++ ||++|..++..|..++
T Consensus 28 ~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~~-~~~~~V~~-~gasG~~al~~A~~~I 105 (392)
T PRK06065 28 TPQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGIR-KPVSRVYV-GGATGVMTAIAGWYHV 105 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCCC-CCeEEEec-CchhHHHHHHHHHHHH
Confidence 3568999999999999999999999999864322 225668888999999987 89999999 9999999999999999
Q ss_pred HcccCCeEEEEEeccC
Q 017814 238 RTYKNKLAIVVSTESM 253 (365)
Q Consensus 238 ~ag~~~~aLVV~~E~~ 253 (365)
++|..++||||++|++
T Consensus 106 ~sG~ad~vLVvg~e~~ 121 (392)
T PRK06065 106 ASGLCQKVLAVAEEKM 121 (392)
T ss_pred hCCCCCEEEEEEeecc
Confidence 9999999999999985
No 66
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.06 E-value=5.4e-10 Score=112.84 Aligned_cols=94 Identities=11% Similarity=0.118 Sum_probs=80.9
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeec-CCCCCCcHHHH-HHHHcCCCCCceEEEecCCccchHHHHHHHHHHH
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSR-IINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss-~~~~~Ps~a~~-v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~l 236 (365)
+.+.+|+.+|+++||+++|++|+|||.+|+.++ .....+..+.. +++.+|+.+ ++.++++. +|++|+.|+..|.++
T Consensus 21 ~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~~-~p~~~V~~-~Casg~~al~~A~~~ 98 (393)
T cd00826 21 DLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQE-APAIGMNN-LCGSGLRALALAMQL 98 (393)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCCC-CcEEEecc-hhHHHHHHHHHHHHH
Confidence 346799999999999999999999999998543 33334555653 677888775 99999999 999999999999999
Q ss_pred HHcccCCeEEEEEeccCC
Q 017814 237 FRTYKNKLAIVVSTESMG 254 (365)
Q Consensus 237 l~ag~~~~aLVV~~E~~S 254 (365)
+++|..+++||+++|.+|
T Consensus 99 I~sG~~~~vlv~g~e~~s 116 (393)
T cd00826 99 IAGGDANCILAGGFEKME 116 (393)
T ss_pred HHCCCCCEEEEEeeeccc
Confidence 999999999999999986
No 67
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.05 E-value=7.5e-10 Score=111.80 Aligned_cols=93 Identities=15% Similarity=0.139 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEee-cCCCC-CCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSP-APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~s-s~~~~-~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
..+|+.+|+++||+++|+.++|||.+|+.+ ..... .+..+..++..+|+++.++.++++. +|++|+.|+..|...++
T Consensus 27 ~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~~-aCaSG~~Al~~A~~~I~ 105 (391)
T PRK07661 27 PDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITINR-YCSSGLQSIAYGAERIM 105 (391)
T ss_pred HHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehhh-hhhHHHHHHHHHHHHHH
Confidence 569999999999999998889999999953 33322 4777778999999986699999999 99999999999999999
Q ss_pred cccCCeEEEEEeccCC
Q 017814 239 TYKNKLAIVVSTESMG 254 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S 254 (365)
+|..+.+||+++|.+|
T Consensus 106 sG~~d~vLv~G~E~ms 121 (391)
T PRK07661 106 LGHSEAVIAGGAESMS 121 (391)
T ss_pred cCCCCEEEEEEEeecc
Confidence 9999999999999887
No 68
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.02 E-value=5e-09 Score=105.75 Aligned_cols=186 Identities=10% Similarity=0.127 Sum_probs=118.5
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcc-cCChhHHHHHHHHHHHhCcceEEee-cCCCc---CCCCCCcchHHh
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEETYG-PRNVV---EGREESPSLAEA 157 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~R~~~-~~~~~---~~~~~~~s~~~~ 157 (365)
++|.|+|+|+..|.-. +.+++.+.+..-. .+.+ ..+ +...+...+... .++.. ..++ .-...
T Consensus 2 ~~v~ItG~g~~~p~g~----~~~~~w~~l~~g~~~~~~-----~~~-~~~~~~~~~~~g~i~~f~~~~~~~~---~~~~~ 68 (411)
T PRK07314 2 RRVVVTGLGAVSPLGN----DVESTWKNLLAGKSGIGP-----ITH-FDTSDLAVKIAGEVKDFNPDDYMSR---KEARR 68 (411)
T ss_pred CcEEEEcceEECCCcC----CHHHHHHHHHhCCCcEEE-----CCc-ccccCCCccEEEEeCCcChhhcCCH---HHhhc
Confidence 4799999999999875 8899998775321 0000 000 011111111100 01100 0111 11112
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCcc----EEEEeecCCC--------------------------CCC-cHHHHHHHH
Q 017814 158 FSEMDEIIFDTLDKLFARTDISPSEID----VLVVNVSLFS--------------------------PAP-SLTSRIINR 206 (365)
Q Consensus 158 ~e~a~~La~~A~~~aL~~agi~p~dID----~LIv~ss~~~--------------------------~~P-s~a~~v~~~ 206 (365)
......|+..|+.+||+++|++++++| .+++.++.+. ..+ ..+..+...
T Consensus 69 ~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 148 (411)
T PRK07314 69 MDRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIR 148 (411)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHH
Confidence 234568999999999999999998888 4555332110 011 245678899
Q ss_pred cCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCC-----Cc-----------C-----CCCcch
Q 017814 207 YNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN-----WY-----------C-----GREKSM 265 (365)
Q Consensus 207 LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~-----~~-----------~-----~~dr~~ 265 (365)
+|+++ +.+.+.. +|++++.||..|.++|++|..+.|||.++|..+.. |. + .-|+.
T Consensus 149 ~gl~G--p~~tv~~-acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~- 224 (411)
T PRK07314 149 YGAKG--PNHSIVT-ACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKD- 224 (411)
T ss_pred hCCCC--ccccchh-hhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCC-
Confidence 99976 7788888 99999999999999999999999999999974321 00 0 00111
Q ss_pred hhhhhhccCCeEEEEEeeccc
Q 017814 266 MLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 266 lv~~~LFgDGAAAvlLs~~~~ 286 (365)
-..+++||||+|+||.+.+.
T Consensus 225 -~dG~~~geGAaavvL~~~~~ 244 (411)
T PRK07314 225 -RDGFVMGEGAGILVLEELEH 244 (411)
T ss_pred -CCCEeEEceEEEEEEeeHHH
Confidence 02578999999999998654
No 69
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.02 E-value=1.4e-09 Score=111.87 Aligned_cols=95 Identities=18% Similarity=0.203 Sum_probs=81.7
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeec-CCCCCCc-HHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHH
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPS-LTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss-~~~~~Ps-~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~l 236 (365)
....+|+.+|+++||+++|++++|||.+|+.+. .....+. .+..++..+|+++.++.++++. +|++|..|+..|...
T Consensus 69 ~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~~-~CaSG~~Ai~~Aa~~ 147 (452)
T PLN02287 69 TYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVNR-QCSSGLQAVADVAAA 147 (452)
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEec-cCchHHHHHHHHHHH
Confidence 346799999999999999999999999998433 3333343 4456778889987799999999 999999999999999
Q ss_pred HHcccCCeEEEEEeccCC
Q 017814 237 FRTYKNKLAIVVSTESMG 254 (365)
Q Consensus 237 l~ag~~~~aLVV~~E~~S 254 (365)
+++|.++.|||+++|.+|
T Consensus 148 I~sG~~dvvLv~GvE~mS 165 (452)
T PLN02287 148 IKAGFYDIGIGAGVESMT 165 (452)
T ss_pred HHcCCCCeEEEEeEEecC
Confidence 999999999999999876
No 70
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.01 E-value=2.8e-09 Score=107.23 Aligned_cols=123 Identities=13% Similarity=0.120 Sum_probs=91.1
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCC-cc----EEEEeecCC-----------------------CCC--CcHHHHHHHHcC
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSE-ID----VLVVNVSLF-----------------------SPA--PSLTSRIINRYN 208 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~d-ID----~LIv~ss~~-----------------------~~~--Ps~a~~v~~~LG 208 (365)
+....++..|+++||+++|+++++ ++ .+++.++.+ ... ...+..++..+|
T Consensus 70 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 149 (407)
T cd00828 70 DRTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLL 149 (407)
T ss_pred CHHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhC
Confidence 456789999999999999998765 33 233322211 011 456778999999
Q ss_pred C-CCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCC----C-----------------cCCCCcchh
Q 017814 209 L-RNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----W-----------------YCGREKSMM 266 (365)
Q Consensus 209 L-~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~----~-----------------~~~~dr~~l 266 (365)
+ ++ +.+.+.+ +|++++.||..|.++|++|..+.+||+++|.++.. | .+-+.+.
T Consensus 150 l~~G--p~~tv~~-aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~~-- 224 (407)
T cd00828 150 SSHG--PIKTPVG-ACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDETR-- 224 (407)
T ss_pred cCCC--CCcCccc-HHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCCC--
Confidence 9 65 7899999 99999999999999999999999999999987510 0 0001111
Q ss_pred hhhhhccCCeEEEEEeecccc
Q 017814 267 LSNILFRSGGCSMLLTNNRAL 287 (365)
Q Consensus 267 v~~~LFgDGAAAvlLs~~~~~ 287 (365)
...++||||+|+||++.+..
T Consensus 225 -~G~~~gEGAaalvLe~~~~A 244 (407)
T cd00828 225 -DGFVEAEGAGVLVLERAELA 244 (407)
T ss_pred -CcEEeecceEEEEEeeHHHH
Confidence 26889999999999986543
No 71
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=99.01 E-value=1.5e-09 Score=109.38 Aligned_cols=93 Identities=16% Similarity=0.222 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeecC-CCCC-CcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSL-FSPA-PSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss~-~~~~-Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
+.+|+.+|++++|+++|++|+|||.+|+.+.. .... +..+..++..+|++.+++.+.++. +|++|+.|+..|.+.++
T Consensus 26 ~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~~-~CaSG~~A~~~A~~~I~ 104 (387)
T PRK07850 26 AAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTIDC-QCGSAQQANHLVAGLIA 104 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEec-ccccHHHHHHHHHHHHH
Confidence 57999999999999999999999999995432 2222 445667788899987799999999 99999999999999999
Q ss_pred cccCCeEEEEEeccCC
Q 017814 239 TYKNKLAIVVSTESMG 254 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S 254 (365)
+|..+.+|++++|++|
T Consensus 105 sG~~dvvla~G~E~mS 120 (387)
T PRK07850 105 AGAIDVGIACGVEAMS 120 (387)
T ss_pred CCCCCEEEEEeEecCC
Confidence 9999999999999998
No 72
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=99.01 E-value=1.6e-09 Score=109.73 Aligned_cols=95 Identities=17% Similarity=0.190 Sum_probs=85.3
Q ss_pred hHHHHHHHHHHHHHHh-CCCCCCCccEEEEeecC--CCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFAR-TDISPSEIDVLVVNVSL--FSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~-agi~p~dID~LIv~ss~--~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~l 236 (365)
.+.+|+..|++++|++ +|++|+|||.+|+.+.. +...+.++..++...||+.+++.+.++. .|++|+.|+.+|.+.
T Consensus 25 ~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~~-~CaSG~~Av~~A~~~ 103 (400)
T PRK13359 25 RADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTINR-LCGSGMDAVGVAARA 103 (400)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEec-cchhHHHHHHHHHHH
Confidence 3679999999999997 59999999999995432 2224788999999999998899999999 999999999999999
Q ss_pred HHcccCCeEEEEEeccCCC
Q 017814 237 FRTYKNKLAIVVSTESMGP 255 (365)
Q Consensus 237 l~ag~~~~aLVV~~E~~S~ 255 (365)
+++|..+.+|++++|.+|.
T Consensus 104 I~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 104 IKSGEAALMIAGGVESMSR 122 (400)
T ss_pred HHcCCCCEEEEeeeeccCC
Confidence 9999999999999999994
No 73
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.00 E-value=8.4e-10 Score=111.51 Aligned_cols=94 Identities=11% Similarity=0.241 Sum_probs=83.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeec-CCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss-~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
.+.+|+.+|++++|+++|++|+|||.+|+.+. .....+..+..++..+|++.+++.+.++. +|++|+.|+..|.+.++
T Consensus 26 ~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~~-~CaSG~~Ai~~A~~~I~ 104 (392)
T PRK06633 26 PAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTINK-VCGSGLKSVALAANSIM 104 (392)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhcc-hhHHHHHHHHHHHHHHH
Confidence 36799999999999999999999999999432 22234567778889999987799999999 99999999999999999
Q ss_pred cccCCeEEEEEeccCC
Q 017814 239 TYKNKLAIVVSTESMG 254 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S 254 (365)
+|..+.+|++++|.+|
T Consensus 105 sG~~dvvla~G~E~ms 120 (392)
T PRK06633 105 TGDNEIVIAGGQENMS 120 (392)
T ss_pred cCCCCEEEEcccccCC
Confidence 9999999999999887
No 74
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.00 E-value=1.5e-09 Score=109.21 Aligned_cols=93 Identities=13% Similarity=0.164 Sum_probs=82.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeec-CCC--CCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFS--PAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss-~~~--~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~l 236 (365)
...+|+.+|+++||+++|++++|||.+|+.++ ++. ..|..+..++..+|+++ .+.+++++ +|+++..|+..|..+
T Consensus 21 ~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~~-~~~~~v~~-aCasg~~ai~~A~~~ 98 (389)
T PRK06064 21 SLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLAP-IPATRVEA-ACASGGAALRQAYLA 98 (389)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCCC-CCeeEEeC-CcHHHHHHHHHHHHH
Confidence 35699999999999999999999999998543 222 24678889999999984 89999999 999999999999999
Q ss_pred HHcccCCeEEEEEeccCC
Q 017814 237 FRTYKNKLAIVVSTESMG 254 (365)
Q Consensus 237 l~ag~~~~aLVV~~E~~S 254 (365)
+++|..++|||+++|.++
T Consensus 99 I~sG~~~~vLv~G~e~~s 116 (389)
T PRK06064 99 VASGEADVVLAAGVEKMT 116 (389)
T ss_pred HHCCCCCEEEEEEEEecc
Confidence 999999999999999765
No 75
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=99.00 E-value=1.1e-09 Score=111.73 Aligned_cols=94 Identities=21% Similarity=0.305 Sum_probs=83.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecC-CCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSL-FSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~-~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
...+|+.+|++++|+++|++|++||.+|+.++. ....+.++.+++..+|++..++.+.++. +|++|+.|+..|.+.++
T Consensus 28 ~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~~-aCaSG~~Ai~~Aa~~I~ 106 (428)
T PRK08963 28 PAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSR-ACATSFQAVANVAESIM 106 (428)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeehh-hhHHHHHHHHHHHHHHH
Confidence 356999999999999999999999999995432 2223667778999999986699999999 99999999999999999
Q ss_pred cccCCeEEEEEeccCC
Q 017814 239 TYKNKLAIVVSTESMG 254 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S 254 (365)
+|.++.|||+++|.+|
T Consensus 107 sG~~dvvLvgG~Esms 122 (428)
T PRK08963 107 AGTIDIGIAGGADSSS 122 (428)
T ss_pred CCCCCEEEEecccccC
Confidence 9999999999999998
No 76
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.00 E-value=3.8e-09 Score=106.09 Aligned_cols=186 Identities=11% Similarity=0.111 Sum_probs=116.9
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcc-cCChhHHHHHHHHHHHhCcceEEee-cCCCc---CCCCCCcchHHh
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEETYG-PRNVV---EGREESPSLAEA 157 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~R~~~-~~~~~---~~~~~~~s~~~~ 157 (365)
++|.|+|+|+..|.-. +.+++.+.+..-. .+.+- .+ ++..+...+... .++.. ..++ +-...
T Consensus 1 ~~v~ItG~g~~~p~g~----~~~~~~~~l~~g~s~~~~~-----~~-~~~~~~~~~~~g~i~~f~~~~~~~~---~~~~~ 67 (407)
T TIGR03150 1 RRVVVTGLGAVTPLGN----GVEEFWENLLAGKSGIGPI-----TR-FDASDLPVKIAGEVKDFDPEDYIDK---KEARR 67 (407)
T ss_pred CcEEEEcceEECCCcC----CHHHHHHHHHcCCCeeEEC-----Cc-ccccCCCCcEEEEeCCcChhhcCCH---HHHhh
Confidence 3689999999999885 8899988775321 01000 00 000111111000 01100 0111 11112
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCccE----EEEeecCC-C-----------------C--------CC-cHHHHHHHH
Q 017814 158 FSEMDEIIFDTLDKLFARTDISPSEIDV----LVVNVSLF-S-----------------P--------AP-SLTSRIINR 206 (365)
Q Consensus 158 ~e~a~~La~~A~~~aL~~agi~p~dID~----LIv~ss~~-~-----------------~--------~P-s~a~~v~~~ 206 (365)
.....+|+.+|+++||+++|+++++||. +++.++.+ . . .+ ..+..+...
T Consensus 68 ~~~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 147 (407)
T TIGR03150 68 MDRFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIR 147 (407)
T ss_pred cCHHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHH
Confidence 2345789999999999999999999886 55432211 0 0 11 244568889
Q ss_pred cCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCC-----------C--cCC--------CCcch
Q 017814 207 YNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN-----------W--YCG--------REKSM 265 (365)
Q Consensus 207 LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~-----------~--~~~--------~dr~~ 265 (365)
+|+++ +.+.+.. +|++++.||..|.++|++|..+.+||+++|.+... + +.. .|..
T Consensus 148 ~gl~g--~~~~v~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~- 223 (407)
T TIGR03150 148 YGAKG--PNHAVVT-ACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKD- 223 (407)
T ss_pred hCCCC--ccccccc-HHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCC-
Confidence 99965 7889999 99999999999999999999999999999974310 0 000 0111
Q ss_pred hhhhhhccCCeEEEEEeeccc
Q 017814 266 MLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 266 lv~~~LFgDGAAAvlLs~~~~ 286 (365)
-...+.||||+|+||.+.+.
T Consensus 224 -~~g~~~gEGAaalvL~~~~~ 243 (407)
T TIGR03150 224 -RDGFVMGEGAGVLVLEELEH 243 (407)
T ss_pred -CCcEEEeceEEEEEEeeHHH
Confidence 02567899999999997654
No 77
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=98.99 E-value=1.9e-09 Score=109.33 Aligned_cols=94 Identities=11% Similarity=0.189 Sum_probs=81.9
Q ss_pred hHHHHHHHHHHHHHHhC-CCCCCCccEEEEeec-CC-CCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFART-DISPSEIDVLVVNVS-LF-SPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~a-gi~p~dID~LIv~ss-~~-~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~l 236 (365)
...+|+.+|+++||+++ |++|+|||.+|+.+. +. ...+..+..++..+|+++ ++.+.++. +|++|..++..|.+.
T Consensus 26 ~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~~-~p~~~v~~-~caSG~~av~~Aa~~ 103 (406)
T PRK07851 26 RPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYDF-LPGTTVNR-YCSSSLQTTRMAFHA 103 (406)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCCC-CCeeeeec-cchhHHHHHHHHHHH
Confidence 35799999999999996 999999999998432 11 224567788999999975 99999999 999999999999999
Q ss_pred HHcccCCeEEEEEeccCCC
Q 017814 237 FRTYKNKLAIVVSTESMGP 255 (365)
Q Consensus 237 l~ag~~~~aLVV~~E~~S~ 255 (365)
+++|.++.|||+++|.+|.
T Consensus 104 I~sG~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 104 IKAGEGDVFISAGVETVSR 122 (406)
T ss_pred HHCCCCCEEEEeeEEeccc
Confidence 9999999999999999873
No 78
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.99 E-value=2.1e-09 Score=108.95 Aligned_cols=94 Identities=12% Similarity=0.185 Sum_probs=83.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeec--CCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVS--LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss--~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll 237 (365)
...+|+.+|++++|+++|++|+|||.+|+.+. .....+..+..++...|++..++.+.++. +|++|..|+..|.+.+
T Consensus 25 ~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~~-~CaSG~~Ai~~A~~~I 103 (401)
T PRK08131 25 RPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVNR-LCASGLAAVIDAARAI 103 (401)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeeec-hhhhHHHHHHHHHHHH
Confidence 45799999999999999999999999999533 22223667777899999987799999999 9999999999999999
Q ss_pred HcccCCeEEEEEeccCC
Q 017814 238 RTYKNKLAIVVSTESMG 254 (365)
Q Consensus 238 ~ag~~~~aLVV~~E~~S 254 (365)
++|..+.+|++++|.+|
T Consensus 104 ~sG~~dvvlagG~Esms 120 (401)
T PRK08131 104 TCGEGDLYLAGGVESMS 120 (401)
T ss_pred HCCCCCEEEEEEecCCC
Confidence 99999999999999998
No 79
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.97 E-value=2.3e-09 Score=108.64 Aligned_cols=95 Identities=16% Similarity=0.152 Sum_probs=84.1
Q ss_pred hHHHHHHHHHHHHHHh-CCCCCCCccEEEEeecC--CCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFAR-TDISPSEIDVLVVNVSL--FSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~-agi~p~dID~LIv~ss~--~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~l 236 (365)
.+.+|+..|++++|++ +|++|+|||.+|+.+.. +...+..+..++..+|++.+++.+.++. +|++|..|+..|.+.
T Consensus 25 ~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~~-aCaSG~~Ai~~A~~~ 103 (401)
T PRK09050 25 RADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTINR-LCGSGMDAVGTAARA 103 (401)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEec-ccccHHHHHHHHHHH
Confidence 3579999999999995 79999999999994332 2224677888999999987899999999 999999999999999
Q ss_pred HHcccCCeEEEEEeccCCC
Q 017814 237 FRTYKNKLAIVVSTESMGP 255 (365)
Q Consensus 237 l~ag~~~~aLVV~~E~~S~ 255 (365)
+++|..+.+|++++|.+|.
T Consensus 104 I~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 104 IKAGEAELMIAGGVESMSR 122 (401)
T ss_pred HHCCCCCEEEEeccccccc
Confidence 9999999999999999983
No 80
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.97 E-value=2.5e-09 Score=107.85 Aligned_cols=94 Identities=10% Similarity=0.177 Sum_probs=81.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecC-CCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSL-FSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~-~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
.+.+|+.+|+++||+++|++|+|||.+|+.+.. ....+..+..++..+|++.+++.+.++. +|++|+.++..|...++
T Consensus 25 ~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~~-~caSg~~av~~Aa~~I~ 103 (388)
T PRK06366 25 KAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVNV-VCASGMLAVESAAREIM 103 (388)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeeec-hhhHHHHHHHHHHHHHh
Confidence 357999999999999999999999999984332 1123445677899999986689999998 99999999999999999
Q ss_pred cccCCeEEEEEeccCC
Q 017814 239 TYKNKLAIVVSTESMG 254 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S 254 (365)
+|..+.||+++.|.+|
T Consensus 104 sG~~d~vla~G~e~ms 119 (388)
T PRK06366 104 LGERDLVIAGGMENMS 119 (388)
T ss_pred cCCCCEEEEEeeEccc
Confidence 9999999999999987
No 81
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.95 E-value=2e-09 Score=110.07 Aligned_cols=94 Identities=18% Similarity=0.276 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecC-CCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSL-FSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~-~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
...+|+.+|++++|+++|++|++||.+|+.+.. ....+.++..++-..|++..++.+.++. +|++|+.|+..|.+.++
T Consensus 30 ~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~~-~CaSG~~A~~~a~~~I~ 108 (430)
T TIGR02446 30 PAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVTR-ACATSFQSAVNVAESIM 108 (430)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhhh-hhhHHHHHHHHHHHHHH
Confidence 356999999999999999999999999995432 2223556777777789996699999999 99999999999999999
Q ss_pred cccCCeEEEEEeccCC
Q 017814 239 TYKNKLAIVVSTESMG 254 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S 254 (365)
+|.++.+|++++|++|
T Consensus 109 sG~~dvvla~G~E~mS 124 (430)
T TIGR02446 109 AGAIDIGIAGGADSSS 124 (430)
T ss_pred CCCCCEEEEeeeEccc
Confidence 9999999999999998
No 82
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.95 E-value=2.9e-09 Score=107.83 Aligned_cols=94 Identities=15% Similarity=0.191 Sum_probs=83.7
Q ss_pred hHHHHHHHHHHHHHHh-CCCCCCCccEEEEeec--CCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFAR-TDISPSEIDVLVVNVS--LFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~-agi~p~dID~LIv~ss--~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~l 236 (365)
.+.+|+.+|++++|++ +|++|+|||.+|+.+. .+...+..+..++..+|++.+++.+.++. +|++|+.|+..|.+.
T Consensus 24 ~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~~-~CaSG~~Ai~~a~~~ 102 (400)
T TIGR02430 24 RADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVNR-LCGSGLDAIGMAARA 102 (400)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEeec-hhhhHHHHHHHHHHH
Confidence 3579999999999995 7999999999999432 22224678888999999997799999999 999999999999999
Q ss_pred HHcccCCeEEEEEeccCC
Q 017814 237 FRTYKNKLAIVVSTESMG 254 (365)
Q Consensus 237 l~ag~~~~aLVV~~E~~S 254 (365)
+++|..+.+|++++|.+|
T Consensus 103 I~sG~~d~~la~G~E~ms 120 (400)
T TIGR02430 103 IKAGEADLLIAGGVESMS 120 (400)
T ss_pred HHCCCCCEEEEecccccc
Confidence 999999999999999998
No 83
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=98.93 E-value=4.6e-09 Score=106.10 Aligned_cols=94 Identities=15% Similarity=0.142 Sum_probs=80.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecC-CCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSL-FSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~-~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
...+|+.+|++++|+++|++++|||.+|+.+.. ....+..+..++..+|++.+++.+.++. +|+++..++..|.+.++
T Consensus 24 ~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~~-~caSg~~av~~Aa~~I~ 102 (394)
T PLN02644 24 SATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVNK-VCASGMKAVMLAAQSIQ 102 (394)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEec-cchHHHHHHHHHHHHHH
Confidence 357999999999999999999999999984322 1223345567889999986789999999 99999999999999999
Q ss_pred cccCCeEEEEEeccCC
Q 017814 239 TYKNKLAIVVSTESMG 254 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S 254 (365)
+|..+.|||+++|.+|
T Consensus 103 sG~~d~vlv~G~E~~s 118 (394)
T PLN02644 103 LGINDVVVAGGMESMS 118 (394)
T ss_pred cCCCCEEEEEeEEecC
Confidence 9999999999999876
No 84
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.92 E-value=1.8e-08 Score=102.69 Aligned_cols=183 Identities=14% Similarity=0.218 Sum_probs=113.6
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHhhhhHH
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEAFSEMD 162 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~~e~a~ 162 (365)
..|.|.|+|+..|--. +.+++.+.+..-. ..-.. .. -+...++..+....-. ..++ .. .. ......
T Consensus 11 ~~VvITG~G~vs~~G~----~~~~~~~~L~~G~-s~i~~---~~-~~~~~~~~~~~~g~~~--~~~~-~~-~~-~~~~~~ 76 (425)
T PRK06501 11 PIVAVTGMGVVTSLGQ----GKADNWAALTAGE-SGIHT---IT-RFPTEGLRTRIAGTVD--FLPE-SP-FG-ASALSE 76 (425)
T ss_pred cCEEEEeeeEECCCCC----CHHHHHHHHHcCC-CceEc---CC-cccccCCCCceEEEEe--eccc-cc-cc-ccCHHH
Confidence 4699999999999884 8899988775321 00000 00 0011112211110000 0011 00 00 011245
Q ss_pred HHHHHHHHHHHHhCCCCCCCcc------------------EEEEeec----------------CCC-------CCCcHHH
Q 017814 163 EIIFDTLDKLFARTDISPSEID------------------VLVVNVS----------------LFS-------PAPSLTS 201 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID------------------~LIv~ss----------------~~~-------~~Ps~a~ 201 (365)
.++..|+++||+++|+++.+.+ .++..+. ... ..|+.+.
T Consensus 77 ~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 156 (425)
T PRK06501 77 ALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIAD 156 (425)
T ss_pred HHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHH
Confidence 6888999999999998654422 1111111 001 2456888
Q ss_pred HHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEecc---------------CCCC--C-----c-
Q 017814 202 RIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTES---------------MGPN--W-----Y- 258 (365)
Q Consensus 202 ~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~---------------~S~~--~-----~- 258 (365)
.|+..+|+++ +.+++.. +|++++.||..|.++|++|..+++||+++|. ++.. + +
T Consensus 157 ~i~~~~gl~G--~~~~i~~-aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rp 233 (425)
T PRK06501 157 RLADRFGTRG--LPISLST-ACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKP 233 (425)
T ss_pred HHHHHhCCCC--CceeecC-ccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCC
Confidence 9999999975 7799999 9999999999999999999999999999993 2210 0 0
Q ss_pred CCCCcchhhhhhhccCCeEEEEEeeccc
Q 017814 259 CGREKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 259 ~~~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
++.+++ ..++||||+|+||+..+.
T Consensus 234 fd~~r~----G~v~GEGaaalVLe~~~~ 257 (425)
T PRK06501 234 FSKDRD----GFVMAEGAGALVLESLES 257 (425)
T ss_pred CCCCCC----CeeeeccEEEEEECcHHH
Confidence 012232 588999999999998654
No 85
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=98.91 E-value=4.9e-09 Score=105.56 Aligned_cols=93 Identities=15% Similarity=0.183 Sum_probs=75.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecC-CC--CCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSL-FS--PAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~-~~--~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~l 236 (365)
...+|+.+|+++||+++|++++|||.+|+.++. .. ..+..+..+...+|++. ++.++++. +|++|+.||..|.++
T Consensus 21 ~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~~-~p~~~v~~-~CaSg~~Al~~A~~~ 98 (389)
T PRK07516 21 TLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALRF-KPATRVEN-ACATGSAAVYAALDA 98 (389)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCCC-Cceeeecc-ccHHHHHHHHHHHHH
Confidence 356999999999999999999999999985432 11 11212233445668765 89999998 999999999999999
Q ss_pred HHcccCCeEEEEEeccCC
Q 017814 237 FRTYKNKLAIVVSTESMG 254 (365)
Q Consensus 237 l~ag~~~~aLVV~~E~~S 254 (365)
+++|.+++|||+++|.+|
T Consensus 99 I~sG~~d~vLvvg~e~~s 116 (389)
T PRK07516 99 IEAGRARIVLVVGAEKMT 116 (389)
T ss_pred HHCCCCCEEEEEEehhhc
Confidence 999999999999999865
No 86
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=98.91 E-value=5.9e-09 Score=105.31 Aligned_cols=94 Identities=17% Similarity=0.266 Sum_probs=80.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecC-CCC-CCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSL-FSP-APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~-~~~-~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll 237 (365)
...+|+.+|++++|+++|++|+|||.+|+.+.. ... .+..+....-..||+.+++.+.++. +|++|+.|+..|.+.+
T Consensus 25 ~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~~-~CaSG~~Ai~~A~~~I 103 (390)
T PRK06504 25 HPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSIDR-QCGSSQQALHFAAQAV 103 (390)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEec-hhhHHHHHHHHHHHHH
Confidence 357999999999999999999999999995432 111 2455555555558876799999999 9999999999999999
Q ss_pred HcccCCeEEEEEeccCC
Q 017814 238 RTYKNKLAIVVSTESMG 254 (365)
Q Consensus 238 ~ag~~~~aLVV~~E~~S 254 (365)
++|..+.+|++++|.+|
T Consensus 104 ~sG~~dvvLagGvEsmS 120 (390)
T PRK06504 104 MSGTMDIVIAAGVESMT 120 (390)
T ss_pred HCCCCCEEEEeeeeecC
Confidence 99999999999999998
No 87
>PRK06158 thiolase; Provisional
Probab=98.90 E-value=4e-09 Score=106.20 Aligned_cols=88 Identities=9% Similarity=0.037 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcc
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag 240 (365)
..+|+.+|+++||+++|++++|||.+|+.+. ....|+ ..+++++|+++ .+.+++.. ||+++..++..|..++++|
T Consensus 28 ~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~--~~la~~lGl~~-~~~~~~~~-g~~s~~~al~~A~~~I~sG 102 (384)
T PRK06158 28 AMELLAQAAHRALADAGLTMADVDGLFTASP-DDALWG--LSVAEYLGIRP-RFVDGTMI-GGSSFLAHLLPAALALEAG 102 (384)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcH--HHHHHHcCCCC-eeeccccC-ccHHHHHHHHHHHHHHHcC
Confidence 4699999999999999999999999998542 233443 57999999987 78889888 9999999999999999999
Q ss_pred cCCeEEEE-EeccC
Q 017814 241 KNKLAIVV-STESM 253 (365)
Q Consensus 241 ~~~~aLVV-~~E~~ 253 (365)
..++|||+ +.|..
T Consensus 103 ~~d~vLV~~g~~~~ 116 (384)
T PRK06158 103 LCDVALICYGSNQR 116 (384)
T ss_pred CCCEEEEeeccccc
Confidence 99999998 55544
No 88
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.90 E-value=1.6e-08 Score=102.34 Aligned_cols=184 Identities=11% Similarity=0.126 Sum_probs=116.2
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhccc-CChhHHHHHHHHHHHhCcceEEee-cCCCcCCCCC---CcchHHh
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKK-LGLEEYRFLLKNMVSSGIGEETYG-PRNVVEGREE---SPSLAEA 157 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~-~~~~~~~~~~ri~~~sGI~~R~~~-~~~~~~~~~~---~~s~~~~ 157 (365)
++|.|+|+|+..|--. +.+++.+.+..-.. ..+ +.+ ++..+...+... .++ .++. .+.....
T Consensus 2 ~~v~ItG~g~vsp~G~----~~~~~~~~L~~G~s~i~~-----~~~-~~~~~~~~~~~g~i~~---f~~~~~~~~~~~~~ 68 (406)
T PRK08439 2 KRVVVTGIGMINSLGL----NKESSFKAICNGECGIKK-----ITL-FDASDFPVQIAGEITD---FDPTEVMDPKEVKK 68 (406)
T ss_pred CCEEEEeeEEECCCcC----CHHHHHHHHHcCCCceEe-----CCC-ccccCCCCceeEEcCC---cChhhcCCHHHHhh
Confidence 4699999999999985 88888887643210 000 000 001111111100 000 0110 0011112
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCccE----EEEeecCC-C-------------------------CCC-cHHHHHHHH
Q 017814 158 FSEMDEIIFDTLDKLFARTDISPSEIDV----LVVNVSLF-S-------------------------PAP-SLTSRIINR 206 (365)
Q Consensus 158 ~e~a~~La~~A~~~aL~~agi~p~dID~----LIv~ss~~-~-------------------------~~P-s~a~~v~~~ 206 (365)
......++..|+.+||+++|+++++++. +++.++.. . ..| ..+..+...
T Consensus 69 ~~~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 148 (406)
T PRK08439 69 ADRFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIE 148 (406)
T ss_pred cCHHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHH
Confidence 2345789999999999999999877763 33322110 0 011 467789999
Q ss_pred cCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccC-CC-C---C---------c--C-------CCCc
Q 017814 207 YNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESM-GP-N---W---------Y--C-------GREK 263 (365)
Q Consensus 207 LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~-S~-~---~---------~--~-------~~dr 263 (365)
+|+++ +.+.+.. +|+++..||..|.++|++|..+.+||+++|.. +. . | . + +.++
T Consensus 149 ~gl~G--p~~~~~~-acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~ 225 (406)
T PRK08439 149 HGLKG--PNLSSVT-ACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDR 225 (406)
T ss_pred hCCCC--Ccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCC
Confidence 99987 6788888 99999999999999999999999999999963 21 0 0 0 0 1122
Q ss_pred chhhhhhhccCCeEEEEEeeccc
Q 017814 264 SMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 264 ~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
+ ..++|+||+++||.....
T Consensus 226 ~----G~v~gEGa~~lvLe~~~~ 244 (406)
T PRK08439 226 D----GFVMGEGAGALVLEEYES 244 (406)
T ss_pred C----cEEeeCceEEEEEccHHH
Confidence 2 578999999999997654
No 89
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.89 E-value=7.3e-09 Score=106.12 Aligned_cols=94 Identities=19% Similarity=0.285 Sum_probs=79.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCC--ccEEEEeecC---CCCCCcHHHHHHHHcCCC------CCceEEEecCCccchHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSE--IDVLVVNVSL---FSPAPSLTSRIINRYNLR------NDIKAFNLSGMGCSASVV 228 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~d--ID~LIv~ss~---~~~~Ps~a~~v~~~LGL~------~~v~~~~l~~mGCsgg~~ 228 (365)
...+|+.+|+++||+++|++++| ||.+|+.+.. +...+.++..++..+|++ ..++.+.++. +|++|+.
T Consensus 47 s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~-~caSG~~ 125 (438)
T PTZ00455 47 TLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEG-ACASGGL 125 (438)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEEC-cCHHHHH
Confidence 35799999999999999999999 9999984322 112456677777666555 3499999999 9999999
Q ss_pred HHHHHHHHHHcccCCeEEEEEeccCC
Q 017814 229 AVDLVQQLFRTYKNKLAIVVSTESMG 254 (365)
Q Consensus 229 AL~lA~~ll~ag~~~~aLVV~~E~~S 254 (365)
|+..|...+++|..+.|||+++|++|
T Consensus 126 Ai~~A~~~I~sG~~dvvlv~G~E~ms 151 (438)
T PTZ00455 126 AVQSAWEALLAGTSDIALVVGVEVQT 151 (438)
T ss_pred HHHHHHHHHHCCCCCEEEEEEEeecc
Confidence 99999999999999999999999875
No 90
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.89 E-value=9e-09 Score=96.52 Aligned_cols=122 Identities=16% Similarity=0.338 Sum_probs=84.6
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCC------ccEEEEeecCCC-----------------C------CC-cHHHHHHHHc
Q 017814 158 FSEMDEIIFDTLDKLFARTDISPSE------IDVLVVNVSLFS-----------------P------AP-SLTSRIINRY 207 (365)
Q Consensus 158 ~e~a~~La~~A~~~aL~~agi~p~d------ID~LIv~ss~~~-----------------~------~P-s~a~~v~~~L 207 (365)
......++..|+.+||+++|+++++ +..++-++...+ + .| ..+..|+..+
T Consensus 84 ~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~ 163 (254)
T PF00109_consen 84 MDRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILF 163 (254)
T ss_dssp S-HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHH
T ss_pred hhhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhc
Confidence 3567789999999999999998853 433333322210 0 12 2567899999
Q ss_pred CCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEec-cCCCC-C--------cCCC------Ccchhhhhhh
Q 017814 208 NLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTE-SMGPN-W--------YCGR------EKSMMLSNIL 271 (365)
Q Consensus 208 GL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E-~~S~~-~--------~~~~------dr~~lv~~~L 271 (365)
|+++ +.+.+.+ +|++++.||..|.++|++|..+.|||.++| ..+.. + ...+ ++.. ...+
T Consensus 164 gl~G--~~~tv~~-acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~--~G~v 238 (254)
T PF00109_consen 164 GLRG--PSYTVST-ACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFA--DGFV 238 (254)
T ss_dssp TB-S--SEEEEE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB---SB-
T ss_pred CCCC--ccccccc-cccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCC--CCEE
Confidence 9997 7888999 999999999999999999999999999999 44421 0 0001 1111 3789
Q ss_pred ccCCeEEEEEeec
Q 017814 272 FRSGGCSMLLTNN 284 (365)
Q Consensus 272 FgDGAAAvlLs~~ 284 (365)
+|+||+++||...
T Consensus 239 ~gEGa~~~vLe~~ 251 (254)
T PF00109_consen 239 LGEGAGALVLERL 251 (254)
T ss_dssp BB-EEEEEEEEEH
T ss_pred EECceEEEEEEEh
Confidence 9999999999864
No 91
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=98.89 E-value=5.1e-09 Score=105.98 Aligned_cols=91 Identities=19% Similarity=0.228 Sum_probs=72.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeec-CCCCC-----CcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPA-----PSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLV 233 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss-~~~~~-----Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA 233 (365)
...+|+.+|+++||+++|++|+|||.+|+.++ ..+.. |+....+ ..++.+ ++++++++ +|++|..||..|
T Consensus 25 s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~--~~~~~g-~~~~~v~~-~Casg~~al~~A 100 (403)
T PRK06289 25 DFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATV--HPALWG-VPASRHEA-ACASGSVATLAA 100 (403)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHH--hhcCCC-Cceeeccc-ccHHHHHHHHHH
Confidence 35699999999999999999999999998533 22111 2222222 335544 68999999 999999999999
Q ss_pred HHHHHcccCCeEEEEEeccCC
Q 017814 234 QQLFRTYKNKLAIVVSTESMG 254 (365)
Q Consensus 234 ~~ll~ag~~~~aLVV~~E~~S 254 (365)
..++++|..++|||+++|++|
T Consensus 101 a~~I~sG~~~~VLvvg~e~~s 121 (403)
T PRK06289 101 MADLRAGRYDVALVVGVELMK 121 (403)
T ss_pred HHHHHcCCCCEEEEEEEEecC
Confidence 999999999999999999865
No 92
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.88 E-value=7.3e-09 Score=104.82 Aligned_cols=92 Identities=13% Similarity=0.174 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeecCC-CCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHc
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLF-SPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~-~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~a 239 (365)
..+|+.+|+++||+++|++++|||.+++.+... .........+++.+|+++ ++...++. +|++|..++..|...+++
T Consensus 27 ~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~~-~~~~~v~~-~c~sg~~ai~~A~~~I~s 104 (398)
T PRK06157 27 AEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLPN-IPVTRVEN-FCATGSEAFRGAVYAVAS 104 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCCC-CCEEEEec-ccHHHHHHHHHHHHHHHC
Confidence 569999999999999999999999999854221 111222366888999986 89999999 999999999999999999
Q ss_pred ccCCeEEEEEeccCC
Q 017814 240 YKNKLAIVVSTESMG 254 (365)
Q Consensus 240 g~~~~aLVV~~E~~S 254 (365)
|..+.+||+++|++|
T Consensus 105 G~~d~vlv~G~e~~s 119 (398)
T PRK06157 105 GAYDIALALGVEKLK 119 (398)
T ss_pred CCCCEEEEEEEeecc
Confidence 999999999999875
No 93
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=98.88 E-value=5.7e-09 Score=105.39 Aligned_cols=92 Identities=21% Similarity=0.291 Sum_probs=75.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCC-CCCC---cHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLF-SPAP---SLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQ 235 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~-~~~P---s~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ 235 (365)
...+|+.+|+++||+++|++|+|||.+|+.++.. ...| +....+...++ ..+++++++. +|++|+.++..|.+
T Consensus 31 ~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~~-~CaSg~~ai~~A~~ 107 (394)
T PRK06445 31 RPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVDR-QCASSLTTVSIGAM 107 (394)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhhh-hhHHHHHHHHHHHH
Confidence 3579999999999999999999999999854332 2223 33334555555 4599999999 99999999999999
Q ss_pred HHHcccCCeEEEEEeccCC
Q 017814 236 LFRTYKNKLAIVVSTESMG 254 (365)
Q Consensus 236 ll~ag~~~~aLVV~~E~~S 254 (365)
++++|..++|||+++|.+|
T Consensus 108 ~I~sG~~d~vLv~G~e~ms 126 (394)
T PRK06445 108 EIATGMADIVIAGGVEHMT 126 (394)
T ss_pred HHHcCCCCEEEEeeecccc
Confidence 9999999999999999776
No 94
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.84 E-value=9.8e-09 Score=103.57 Aligned_cols=93 Identities=16% Similarity=0.241 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCccEEEEeecC-CCC-CCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHH
Q 017814 161 MDEIIFDTLDKLFAR-TDISPSEIDVLVVNVSL-FSP-APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (365)
Q Consensus 161 a~~La~~A~~~aL~~-agi~p~dID~LIv~ss~-~~~-~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll 237 (365)
+.+|+..+++++|++ +|++|+|||.+|+.+.. ... .+..+..++...|++..++.+.++. +|++|+.|+..|.+++
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~~-~caSG~~Ai~~A~~~I 105 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVNR-LCGSSMQALHDAARAI 105 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeeec-hhHHHHHHHHHHHHHH
Confidence 579999999999996 79999999999995432 222 3556777889999986799999999 9999999999999999
Q ss_pred HcccCCeEEEEEeccCC
Q 017814 238 RTYKNKLAIVVSTESMG 254 (365)
Q Consensus 238 ~ag~~~~aLVV~~E~~S 254 (365)
++|..+.+||+++|.+|
T Consensus 106 ~sG~~d~vlv~G~E~ms 122 (387)
T PRK08947 106 MTGDGDVFLIGGVEHMG 122 (387)
T ss_pred HCCCCCEEEEccccccc
Confidence 99999999999999987
No 95
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=98.84 E-value=8.5e-08 Score=97.27 Aligned_cols=120 Identities=13% Similarity=0.216 Sum_probs=87.6
Q ss_pred hHHHHHHHHHHHHHHhCCCC---CCCccEEEEeecC----------------CCCCC---------cHHHHHHHHcCCCC
Q 017814 160 EMDEIIFDTLDKLFARTDIS---PSEIDVLVVNVSL----------------FSPAP---------SLTSRIINRYNLRN 211 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~---p~dID~LIv~ss~----------------~~~~P---------s~a~~v~~~LGL~~ 211 (365)
....++..|+++||+++|++ +++|+.++.++.. ....| ..+..|+..+|+++
T Consensus 79 ~~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~G 158 (410)
T PRK07103 79 LSAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRG 158 (410)
T ss_pred HHHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCCC
Confidence 35679999999999999986 4567666643321 01112 25567889999976
Q ss_pred CceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccC-CCC----C-------------------c-CCCCcchh
Q 017814 212 DIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESM-GPN----W-------------------Y-CGREKSMM 266 (365)
Q Consensus 212 ~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~-S~~----~-------------------~-~~~dr~~l 266 (365)
+++.+.+ +|++++.||..|.++|++|..+.+||+++|.. +.. | . ++.++
T Consensus 159 --~~~tv~~-acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~~--- 232 (410)
T PRK07103 159 --EGFTVGG-ASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQDR--- 232 (410)
T ss_pred --Ccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCCC---
Confidence 6788999 99999999999999999999999999998631 100 0 0 01112
Q ss_pred hhhhhccCCeEEEEEeeccc
Q 017814 267 LSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 267 v~~~LFgDGAAAvlLs~~~~ 286 (365)
...++||||+|+||++.+.
T Consensus 233 -dG~v~gEGaaalvLe~~~~ 251 (410)
T PRK07103 233 -DGFIYGEACGAVVLESAES 251 (410)
T ss_pred -CCeeEeeeEEEEEEccHHH
Confidence 2678999999999997654
No 96
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.83 E-value=1.3e-08 Score=104.08 Aligned_cols=92 Identities=14% Similarity=0.102 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeecC-CCCCCcHH-HHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSL-FSPAPSLT-SRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss~-~~~~Ps~a-~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
..+|+.+|+++||+++|++++|||.+|+.+.. ....+..+ ..++..+|+++ ++++.++. ||+++..|+..|...|+
T Consensus 37 ~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~~-~~~~~v~~-~~aSg~~ai~~A~~~I~ 114 (430)
T PRK06365 37 FRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLVP-KPSKRIEG-GGATGGLAFQAGYEEIA 114 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCCC-CceEEEeC-CcHHHHHHHHHHHHHHH
Confidence 46999999999999999999999998875322 22222333 34679999987 99999999 99999999999999999
Q ss_pred cccCCeEEEEEeccCC
Q 017814 239 TYKNKLAIVVSTESMG 254 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S 254 (365)
+|.++.|||+++|.+|
T Consensus 115 sG~~~~vLv~G~e~~s 130 (430)
T PRK06365 115 SGRMDCVAVYGFETMS 130 (430)
T ss_pred cCCCCEEEEEEeeecc
Confidence 9999999999999865
No 97
>PRK08256 lipid-transfer protein; Provisional
Probab=98.80 E-value=1.6e-08 Score=101.86 Aligned_cols=90 Identities=17% Similarity=0.202 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcc
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag 240 (365)
..+|+.+|+++||+++|++++|||.+++.+....... ...++..+|+++ ++.++++. +|+++..++..|.+++++|
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~--~~~~~~~lGl~~-~~~~~v~~-~caSg~~ai~~A~~~I~sG 97 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS--GQRALYEVGMTG-IPIVNVNN-NCSTGSTALFLARQAVRSG 97 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch--hHHHHHHcCCCC-CCCccccc-ccHHHHHHHHHHHHHHHCC
Confidence 5699999999999999999999999987433221111 235678899976 78899999 9999999999999999999
Q ss_pred cCCeEEEEEeccCC
Q 017814 241 KNKLAIVVSTESMG 254 (365)
Q Consensus 241 ~~~~aLVV~~E~~S 254 (365)
..++|||+++|.++
T Consensus 98 ~~d~vLv~g~e~~s 111 (391)
T PRK08256 98 AADCALALGFEQMQ 111 (391)
T ss_pred CCCEEEEEEEeecc
Confidence 99999999999876
No 98
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.78 E-value=1.3e-08 Score=102.58 Aligned_cols=94 Identities=16% Similarity=0.223 Sum_probs=80.8
Q ss_pred hHHHHHHHHHHHHHHh-CCCCCCCccEEEEeecC-CCC-CCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFAR-TDISPSEIDVLVVNVSL-FSP-APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~-agi~p~dID~LIv~ss~-~~~-~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~l 236 (365)
.+.+|+.+|++++|++ +|++|+|||.+|+.+.. ... .+..+..+....|++..++.+.++. +|++|+.|+..|.+.
T Consensus 24 ~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~~-~CaSG~~Ai~~Aa~~ 102 (385)
T TIGR02445 24 RAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVNR-LCGSSMQALHDAARA 102 (385)
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhhh-hhHHHHHHHHHHHHH
Confidence 3579999999999996 59999999999995432 222 3446666666889998899999999 999999999999999
Q ss_pred HHcccCCeEEEEEeccCC
Q 017814 237 FRTYKNKLAIVVSTESMG 254 (365)
Q Consensus 237 l~ag~~~~aLVV~~E~~S 254 (365)
+++|..+.+|++++|.+|
T Consensus 103 I~sG~~d~vlagG~E~ms 120 (385)
T TIGR02445 103 IMTGDADVCLVGGVEHMG 120 (385)
T ss_pred HHCCCCCEEEEeeehhcc
Confidence 999999999999999987
No 99
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.78 E-value=1.1e-07 Score=96.61 Aligned_cols=187 Identities=11% Similarity=0.153 Sum_probs=115.6
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcc-cCChhHHHHHHHHHHHhCcceEE--eecCCCc----CCCCCC---c
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEET--YGPRNVV----EGREES---P 152 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~R~--~~~~~~~----~~~~~~---~ 152 (365)
++|.|+|+|+..|.-. +.+++.+.+..-. ...+-. . +...+...+. ..++... ..+++. +
T Consensus 4 ~~V~ItG~g~~~p~g~----~~~~~w~~l~~G~s~i~~~~--~----~~~~~~~~~~~g~i~~~~~~~~~~fd~~~~i~~ 73 (424)
T PRK06333 4 KRIVVTGMGAVSPLGC----GVETFWQRLLAGQSGIRTLT--D----FPVGDLATKIGGQVPDLAEDAEAGFDPDRYLDP 73 (424)
T ss_pred CCEEEEcceEECCCCC----CHHHHHHHHHcCCCeEEeCC--c----ccccCCCCceEEEeccccccccccCChhHcCCH
Confidence 5799999999999885 8899988765321 000000 0 0000111110 1111000 001100 1
Q ss_pred chHHhhhhHHHHHHHHHHHHHHhCCCCCCCc-c----EEEEeecCC-C---------------------CCC-----cHH
Q 017814 153 SLAEAFSEMDEIIFDTLDKLFARTDISPSEI-D----VLVVNVSLF-S---------------------PAP-----SLT 200 (365)
Q Consensus 153 s~~~~~e~a~~La~~A~~~aL~~agi~p~dI-D----~LIv~ss~~-~---------------------~~P-----s~a 200 (365)
...........++..|+++||+++|++++++ + .+++.++.+ . ..| ..+
T Consensus 74 ~~~~~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 153 (424)
T PRK06333 74 KDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAA 153 (424)
T ss_pred HHHhhcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHH
Confidence 1112234567889999999999999987766 2 344432211 0 011 235
Q ss_pred HHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCC-----C-----cC-----------
Q 017814 201 SRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN-----W-----YC----------- 259 (365)
Q Consensus 201 ~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~-----~-----~~----------- 259 (365)
..+...+|+++ +++.+.. +|++++.||..|.++|++|..+.+||+++|.+... | ..
T Consensus 154 ~~is~~~gl~G--p~~~v~~-aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~ 230 (424)
T PRK06333 154 GHVSIRYGFKG--PLGAPVT-ACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQAS 230 (424)
T ss_pred HHHHHHhCCCC--CCccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCC
Confidence 67888999975 8888889 99999999999999999999999999999974210 0 00
Q ss_pred ---CCCcchhhhhhhccCCeEEEEEeeccc
Q 017814 260 ---GREKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 260 ---~~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
+.+++ ..+.||||+++||.+...
T Consensus 231 ~Pfd~~~~----G~~~gEGaa~lvLe~~~~ 256 (424)
T PRK06333 231 RPFDRDRD----GFVMGEGAGILVIETLEH 256 (424)
T ss_pred CCCCCCCC----CeEEecceEEEEEeeHHH
Confidence 01122 567899999999997554
No 100
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.77 E-value=3e-08 Score=101.35 Aligned_cols=94 Identities=18% Similarity=0.199 Sum_probs=80.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCC-CCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLF-SPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~-~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
...+|+.+|++++|+++|++++|||.+|+.+... ...+..+..++-..|++..++.+.++. +|++|..++..|...++
T Consensus 30 ~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~~-~CaSG~~ai~~A~~~I~ 108 (427)
T PRK09268 30 SNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQQ-ACGTGLEAAILVANKIA 108 (427)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeeec-hhhHHHHHHHHHHHHHH
Confidence 3579999999999999999999999999954321 123456666666677766689999999 99999999999999999
Q ss_pred cccCCeEEEEEeccCC
Q 017814 239 TYKNKLAIVVSTESMG 254 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S 254 (365)
+|..+.+||+++|.+|
T Consensus 109 sG~~d~vlvgG~E~ms 124 (427)
T PRK09268 109 LGQIDSGIAGGVDTTS 124 (427)
T ss_pred CCCCCEEEEeeEEccC
Confidence 9999999999999998
No 101
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=98.73 E-value=5.3e-08 Score=99.02 Aligned_cols=95 Identities=16% Similarity=0.161 Sum_probs=86.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCC--CCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSP--APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~--~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll 237 (365)
.+.+|+..+++++++++|++|++||.||+.+..... .+.++.+.+-..||+.+++.+.++. -|++|+.|+.+|.+.+
T Consensus 28 ~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvnr-~C~Sgl~ai~~aa~~I 106 (417)
T PRK06025 28 HPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLDR-FCGGGITSVNLAAAQI 106 (417)
T ss_pred CHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeecc-ccchHHHHHHHHHHHH
Confidence 367999999999999999999999999995443222 4789999999999999999999999 9999999999999999
Q ss_pred HcccCCeEEEEEeccCCC
Q 017814 238 RTYKNKLAIVVSTESMGP 255 (365)
Q Consensus 238 ~ag~~~~aLVV~~E~~S~ 255 (365)
++|..+.+|+.++|.+|.
T Consensus 107 ~~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 107 MSGMEDLVIAGGTEMMSY 124 (417)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999994
No 102
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.72 E-value=6e-07 Score=91.37 Aligned_cols=187 Identities=10% Similarity=0.081 Sum_probs=115.7
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcc-cCChhHHHHHHHHHHHhCcceEEee-cCCCcCCCCC---CcchHHh
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEETYG-PRNVVEGREE---SPSLAEA 157 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~R~~~-~~~~~~~~~~---~~s~~~~ 157 (365)
++|.|+|+|+..|--. +.+++.+.+..-. ...+ ..+ ++..+...+... .++. +++ .+.....
T Consensus 4 ~~VvItG~g~~~p~g~----~~~~~w~~L~~g~s~i~~-----~~~-~~~~~~~~~~~g~i~~~---~~~~~~~~~~~~~ 70 (414)
T PRK08722 4 RRVVVTGMGMLSPVGN----TVESSWKALLAGQSGIVN-----IEH-FDTTNFSTRFAGLVKDF---NCEEYMSKKDARK 70 (414)
T ss_pred CCEEEEeeEEECCCCC----CHHHHHHHHHhCCCeeee-----cCc-cccccCCCceeEEcCCC---ChhHcCCHHHHhh
Confidence 6899999999999985 8899988764211 0000 000 011111111100 0000 010 0011111
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCC-----ccEEEEeecCCC-----------------C--------CC-cHHHHHHHH
Q 017814 158 FSEMDEIIFDTLDKLFARTDISPSE-----IDVLVVNVSLFS-----------------P--------AP-SLTSRIINR 206 (365)
Q Consensus 158 ~e~a~~La~~A~~~aL~~agi~p~d-----ID~LIv~ss~~~-----------------~--------~P-s~a~~v~~~ 206 (365)
......++..|+.+||+++|+++++ ++.++-++.... . .| ..+..+...
T Consensus 71 ~d~~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~ 150 (414)
T PRK08722 71 MDLFIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIM 150 (414)
T ss_pred cCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHH
Confidence 2334578889999999999987543 333332321110 0 11 367788899
Q ss_pred cCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCC-----Cc-----------CC-----CCcch
Q 017814 207 YNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN-----WY-----------CG-----REKSM 265 (365)
Q Consensus 207 LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~-----~~-----------~~-----~dr~~ 265 (365)
+|+++ +++.+.. +|++++.||..|.++|++|..+.+||+++|..... |. ++ -|+..
T Consensus 151 ~gl~G--p~~ti~~-aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~ 227 (414)
T PRK08722 151 RGLRG--PNIAIST-ACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKDR 227 (414)
T ss_pred hCCCC--Ccccccc-ccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCCC
Confidence 99997 8889999 99999999999999999999999999999975421 00 00 01110
Q ss_pred hhhhhhccCCeEEEEEeecccc
Q 017814 266 MLSNILFRSGGCSMLLTNNRAL 287 (365)
Q Consensus 266 lv~~~LFgDGAAAvlLs~~~~~ 287 (365)
...+.|||++++||...+..
T Consensus 228 --~G~~~gEGaaalvLe~~~~A 247 (414)
T PRK08722 228 --DGFVLGDGAGMMVLEEYEHA 247 (414)
T ss_pred --CceEeeceEEEEEEccHHHH
Confidence 26788999999999976543
No 103
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=98.72 E-value=4.5e-08 Score=98.46 Aligned_cols=94 Identities=17% Similarity=0.258 Sum_probs=76.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCC-CC-CCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLF-SP-APSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~-~~-~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll 237 (365)
...+|+.+|+++||+++|++++|||.+|+.+... .. .+..+....-..|++..++.+.++. +|++|..++..|.+.|
T Consensus 25 ~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~~-acaSg~~Av~~Aa~~I 103 (382)
T PRK07801 25 HPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVDR-QCGSSQQAIHFAAQAV 103 (382)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeecc-hhhhHHHHHHHHHHHH
Confidence 3579999999999999999999999999854311 11 1334444444577765688999999 9999999999999999
Q ss_pred HcccCCeEEEEEeccCC
Q 017814 238 RTYKNKLAIVVSTESMG 254 (365)
Q Consensus 238 ~ag~~~~aLVV~~E~~S 254 (365)
++|..+.|||++.|.+|
T Consensus 104 ~sG~~d~vLv~G~e~ms 120 (382)
T PRK07801 104 MSGTQDLVVAGGVQNMS 120 (382)
T ss_pred HCCCCCEEEEcchhhhc
Confidence 99999999999999764
No 104
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=98.69 E-value=2.9e-07 Score=94.25 Aligned_cols=120 Identities=10% Similarity=0.110 Sum_probs=88.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCC-----CCccEEEEeecCCC------------------C--------CC-cHHHHHHHHc
Q 017814 160 EMDEIIFDTLDKLFARTDISP-----SEIDVLVVNVSLFS------------------P--------AP-SLTSRIINRY 207 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p-----~dID~LIv~ss~~~------------------~--------~P-s~a~~v~~~L 207 (365)
....++..|+.+||+++|+++ .+.+.+++.++.+. . .+ ..+..+...+
T Consensus 92 ~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~ 171 (437)
T PLN02836 92 RFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRY 171 (437)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHh
Confidence 355789999999999999854 24556666432110 0 11 2456788999
Q ss_pred CCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCC-----C----------c--C-------CCCc
Q 017814 208 NLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN-----W----------Y--C-------GREK 263 (365)
Q Consensus 208 GL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~-----~----------~--~-------~~dr 263 (365)
|+++ +.+.+.. +|+++..||..|.++|++|..+.+||.++|..... | . . +.++
T Consensus 172 gl~G--p~~tv~~-acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~ 248 (437)
T PLN02836 172 GFQG--PNHAAVT-ACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR 248 (437)
T ss_pred CCCC--ceeceeC-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC
Confidence 9987 8889999 99999999999999999999999999999863210 0 0 0 0112
Q ss_pred chhhhhhhccCCeEEEEEeeccc
Q 017814 264 SMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 264 ~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
..+..||||+|+||.+.+.
T Consensus 249 ----~G~~~gEGaaalVLe~~~~ 267 (437)
T PLN02836 249 ----DGFVIGEGAGVLVLEELEH 267 (437)
T ss_pred ----CCeeeecCEEEEEEeeHHH
Confidence 2678899999999997654
No 105
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=98.64 E-value=6.2e-07 Score=94.17 Aligned_cols=186 Identities=9% Similarity=0.118 Sum_probs=114.4
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCC---CcchHHhhh
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREE---SPSLAEAFS 159 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~---~~s~~~~~e 159 (365)
++|.|+|+|+..|--. +.+++.+.+..- . ..+..+.+ +....+..+... . .....++ .+.......
T Consensus 129 ~rVvITG~G~vtp~G~----~~~~~w~~L~~G-~---s~i~~~~~-f~~~~~~~~~ag-~-i~~f~~~~~l~~k~~r~md 197 (540)
T PLN02787 129 RRVVVTGMGVVSPLGH----DPDVFYNNLLEG-V---SGISEIER-FDCSQFPTRIAG-E-IKSFSTDGWVAPKLSKRMD 197 (540)
T ss_pred CCEEEEeeEEECCCCC----CHHHHHHHHHcC-C---CcccccCc-cchhhCCccccc-c-ccccChhhcCCHHHHHhCC
Confidence 5899999999999985 889998877431 1 00000000 001111111000 0 0000000 011122223
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCcc-------EEEEeecC-CC------------------C------CC-cHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEID-------VLVVNVSL-FS------------------P------AP-SLTSRIINR 206 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID-------~LIv~ss~-~~------------------~------~P-s~a~~v~~~ 206 (365)
....++..|+++||+++|++++.++ .|++.++. .. + .+ ..+.+++..
T Consensus 198 ~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 277 (540)
T PLN02787 198 KFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMD 277 (540)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHH
Confidence 4557888999999999998754211 34443221 10 0 11 235678999
Q ss_pred cCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCC-----C---------c---------CCCCc
Q 017814 207 YNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN-----W---------Y---------CGREK 263 (365)
Q Consensus 207 LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~-----~---------~---------~~~dr 263 (365)
+|+++ +.+.+.. +|+++..||..|.++|++|..+.+||.++|..... | + ++.++
T Consensus 278 ~gl~G--p~~tist-ACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~r 354 (540)
T PLN02787 278 LGWMG--PNYSIST-ACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNR 354 (540)
T ss_pred hCCCC--Ccccccc-ccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCC
Confidence 99986 7889999 99999999999999999999999999999963210 0 0 01122
Q ss_pred chhhhhhhccCCeEEEEEeeccc
Q 017814 264 SMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 264 ~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
+ ..++|+||+++||+..+.
T Consensus 355 d----Gfv~GEGAa~lVLE~~e~ 373 (540)
T PLN02787 355 D----GFVMGEGAGVLLLEELEH 373 (540)
T ss_pred C----CcccccceEEEEEeeHHH
Confidence 2 678999999999997554
No 106
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.63 E-value=5.5e-07 Score=91.19 Aligned_cols=186 Identities=15% Similarity=0.115 Sum_probs=113.7
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcc-cCChhHHHHHHHHHHHhCcceEEee-cCCCc---CCCCCCcchHHh
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEETYG-PRNVV---EGREESPSLAEA 157 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~R~~~-~~~~~---~~~~~~~s~~~~ 157 (365)
++|.|+|+|+..|--. +.+++.+.+..-. ...+- .+ +...+...+... .++.. ..++ .....
T Consensus 1 ~~VvItG~G~vsp~G~----~~~~~w~~L~~G~s~i~~~-----~~-~~~~~~~~~~~g~i~~~~~~~~~~~---~~~~~ 67 (399)
T cd00832 1 RRAVVTGIGVVAPNGL----GVEEYWKAVLDGRSGLGPI-----TR-FDPSGYPARLAGEVPDFDAAEHLPG---RLLPQ 67 (399)
T ss_pred CCEEEEeeEEeCCCCC----CHHHHHHHHHhCCCeEeeC-----Cc-cccccCCCceeEEeCCcChhhcCCH---HHHhh
Confidence 3689999999999885 7899988764321 00000 00 001111111000 01100 0011 11112
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCcc----EEEE-eecCCC-----------------CCC---------cHHHHHHHH
Q 017814 158 FSEMDEIIFDTLDKLFARTDISPSEID----VLVV-NVSLFS-----------------PAP---------SLTSRIINR 206 (365)
Q Consensus 158 ~e~a~~La~~A~~~aL~~agi~p~dID----~LIv-~ss~~~-----------------~~P---------s~a~~v~~~ 206 (365)
......++..|+.+||+++|+++++++ .|++ ++.... ..| ..+..|+..
T Consensus 68 ~d~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 147 (399)
T cd00832 68 TDRMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIR 147 (399)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHH
Confidence 234567899999999999999765432 2343 322110 001 245678899
Q ss_pred cCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCC----------CcC-C---------CCcchh
Q 017814 207 YNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----------WYC-G---------REKSMM 266 (365)
Q Consensus 207 LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~----------~~~-~---------~dr~~l 266 (365)
+|+++ +++.+.. +|++++.||..|.++|+.|. +.+||.++|..... ... . -|+..
T Consensus 148 ~gl~G--p~~ti~~-acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~- 222 (399)
T cd00832 148 HGMRG--PSGVVVA-EQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA- 222 (399)
T ss_pred hCCCC--Ccccccc-hhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC-
Confidence 99987 8888889 99999999999999999999 99999999873210 000 0 01110
Q ss_pred hhhhhccCCeEEEEEeecccc
Q 017814 267 LSNILFRSGGCSMLLTNNRAL 287 (365)
Q Consensus 267 v~~~LFgDGAAAvlLs~~~~~ 287 (365)
...+.|+||+++||.+.+..
T Consensus 223 -~G~~~gEGa~~lvLe~~~~A 242 (399)
T cd00832 223 -AGYVPGEGGAILVLEDAAAA 242 (399)
T ss_pred -CCEeeeceEEEEEEeeHHHH
Confidence 26789999999999986553
No 107
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.61 E-value=4.2e-07 Score=92.27 Aligned_cols=187 Identities=7% Similarity=0.124 Sum_probs=114.9
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHH-hCcceEEeec-CCCcCCCCC-CcchHHhhh
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVS-SGIGEETYGP-RNVVEGREE-SPSLAEAFS 159 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~-sGI~~R~~~~-~~~~~~~~~-~~s~~~~~e 159 (365)
++|.|+|+|+..|--. +.+++.+.+..-. .-++.+.+ +.. .++..+.... ++... +.. .+.......
T Consensus 2 ~~VvITG~g~vtp~G~----~~~~~~~~L~~g~----s~i~~~~~-~~~~~~~~~~~~~~v~~~~~-~~~~~~~~~r~~~ 71 (405)
T PRK09116 2 RRVVVTGMGGVTALGE----DWQTIAARLKAGR----NAVRRMPE-WDRYDGLNTRLAAPIDDFEL-PAHYTRKKIRSMG 71 (405)
T ss_pred CCEEEEeeEEECCCCC----CHHHHHHHHHcCC----CCEEeCCc-hhhccCCCCceEEEecCcCh-hHhcCHHHHhhCC
Confidence 4699999999999885 8899988764311 00000000 000 1222221111 11000 000 001111123
Q ss_pred hHHHHHHHHHHHHHHhCCCCC------CCccEEEEeecCCC-------------------------CCCc-HHHHHHHHc
Q 017814 160 EMDEIIFDTLDKLFARTDISP------SEIDVLVVNVSLFS-------------------------PAPS-LTSRIINRY 207 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p------~dID~LIv~ss~~~-------------------------~~Ps-~a~~v~~~L 207 (365)
....++..|+++||+++|++. +.++.++-++.... ..|+ .+..++..+
T Consensus 72 ~~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 151 (405)
T PRK09116 72 RVSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFF 151 (405)
T ss_pred HHHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHh
Confidence 456789999999999999832 23433332321110 0122 567789999
Q ss_pred CCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCC----C-----------c-------CCCCcch
Q 017814 208 NLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----W-----------Y-------CGREKSM 265 (365)
Q Consensus 208 GL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~----~-----------~-------~~~dr~~ 265 (365)
|+++ +.+.+.. +|++++.||..|.++|++|..+.+||.++|..+.. | . ++.+++
T Consensus 152 ~~~G--p~~ti~~-acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~~- 227 (405)
T PRK09116 152 GLKG--RVIPTSS-ACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANRD- 227 (405)
T ss_pred CCCC--Ccccccc-hhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCCC-
Confidence 9997 8889999 99999999999999999999999999999975410 0 0 011122
Q ss_pred hhhhhhccCCeEEEEEeeccc
Q 017814 266 MLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 266 lv~~~LFgDGAAAvlLs~~~~ 286 (365)
..+.|+||+++||+....
T Consensus 228 ---G~v~gEGa~~~vLe~~~~ 245 (405)
T PRK09116 228 ---GLVIGEGAGTLVLEELEH 245 (405)
T ss_pred ---CEeeeccEEEEEEccHHH
Confidence 678899999999997544
No 108
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.61 E-value=1.3e-07 Score=95.57 Aligned_cols=89 Identities=11% Similarity=0.082 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcc
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag 240 (365)
..+|+.+|+++||+++|++++|||.++..+.. .+.....+++.+|+++ .+...+.. ||+++..++..|...+++|
T Consensus 25 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~~~~~~~~lGl~~-~~~~~v~~-gg~s~~~a~~~A~~~I~sG 99 (388)
T PRK08142 25 VAQLHAEVAKGALADAGLSLADVDGYFCAGDA---PGLGPASMVDYLGLKL-RHVDSTET-GGSSYLAHVGHAAQAIAAG 99 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC---CCccHHHHHHhCCCCC-eeeccccC-CcHHHHHHHHHHHHHHHcC
Confidence 46999999999999999999999997752111 1111245889999976 78888888 9999999999999999999
Q ss_pred cCCeEEEEEeccCC
Q 017814 241 KNKLAIVVSTESMG 254 (365)
Q Consensus 241 ~~~~aLVV~~E~~S 254 (365)
.++.||||+.|+.+
T Consensus 100 ~~d~vLvvg~e~~~ 113 (388)
T PRK08142 100 KCSVALITLAGRPR 113 (388)
T ss_pred CCCEEEEEeeeecc
Confidence 99999999999743
No 109
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=98.61 E-value=2.8e-07 Score=91.06 Aligned_cols=172 Identities=17% Similarity=0.255 Sum_probs=127.6
Q ss_pred hhcCCCCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCCCcchHHh
Q 017814 78 LQKRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREESPSLAEA 157 (365)
Q Consensus 78 ~~~r~~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~~~s~~~~ 157 (365)
.+..|.+|.|.++.+|.|... |+|+++..+-+... .+ -..|+++....- ..-
T Consensus 5 ~~~~p~dvGI~aieiyfP~~y---V~Q~elEk~d~vs~---gK---------ytIGLGq~~Mgf-------------csd 56 (462)
T KOG1393|consen 5 ASNWPKDVGIIAIEIYFPSQY---VDQEELEKFDGVSA---GK---------YTIGLGQTQMGF-------------CSD 56 (462)
T ss_pred cccCccccceeEEEEEcCccc---cChhhHhhcCCccc---cc---------eEeccCcceecc-------------cCc
Confidence 345788999999999999999 99999987643210 11 134666654321 112
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCccEEEEee-cCCCCCCcHHHHHHHHcC--CCCCceEEEecCCccchHHHHHHHHH
Q 017814 158 FSEMDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYN--LRNDIKAFNLSGMGCSASVVAVDLVQ 234 (365)
Q Consensus 158 ~e~a~~La~~A~~~aL~~agi~p~dID~LIv~s-s~~~~~Ps~a~~v~~~LG--L~~~v~~~~l~~mGCsgg~~AL~lA~ 234 (365)
+|++..|...++++++++-+++++.|+-|-|.+ +.-.-.-|.-..+.+-++ =..|+.-.|..+ +|.||..||-.|.
T Consensus 57 rEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttn-ACYGGtaALfnav 135 (462)
T KOG1393|consen 57 REDIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTN-ACYGGTAALFNAV 135 (462)
T ss_pred hhhhhhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccccccccc-cccccHHHHHHHh
Confidence 466778999999999999999999999999953 332334455566666665 456799999999 9999999999999
Q ss_pred HHHHccc--CCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeeccc
Q 017814 235 QLFRTYK--NKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 235 ~ll~ag~--~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
+++++.. .+.++||++|..-- -.|+-| ..=|-||.|+|+++...
T Consensus 136 nWiESssWDGr~aivV~gDIAvY--~~G~aR------pTGGAgAVAmLIgPnAp 181 (462)
T KOG1393|consen 136 NWIESSSWDGRYAIVVCGDIAVY--AKGNAR------PTGGAGAVAMLIGPNAP 181 (462)
T ss_pred hhhhhcccCCceeEEEEeeEEEe--cCCCCC------CCCCcceEEEEEcCCCc
Confidence 9999974 69999999998651 112323 34588999999997653
No 110
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.60 E-value=7.5e-07 Score=89.90 Aligned_cols=81 Identities=20% Similarity=0.234 Sum_probs=65.7
Q ss_pred CcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCC----C-----------c-CC
Q 017814 197 PSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----W-----------Y-CG 260 (365)
Q Consensus 197 Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~----~-----------~-~~ 260 (365)
+..+..++..+|+++ +++.+.. ||++++.||..|.++|++|..+.|||+++|..+.. | + ++
T Consensus 137 ~~~a~~ia~~lgl~G--p~~~i~~-acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd 213 (392)
T PRK09185 137 GSLADFLRAYLGLSG--PAYTIST-ACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFS 213 (392)
T ss_pred cHHHHHHHHHhCCCC--CcccccC-hhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCc
Confidence 357788999999986 8888989 99999999999999999999999999999964411 0 0 11
Q ss_pred CCcchhhhhhhccCCeEEEEEeec
Q 017814 261 REKSMMLSNILFRSGGCSMLLTNN 284 (365)
Q Consensus 261 ~dr~~lv~~~LFgDGAAAvlLs~~ 284 (365)
.+++ ..++||||+++||++.
T Consensus 214 ~~~~----G~~~gEGaa~vVLe~~ 233 (392)
T PRK09185 214 ANRD----GINIGEAAAFFLLERE 233 (392)
T ss_pred CCCC----ccceeceEEEEEEEEc
Confidence 1222 5789999999999987
No 111
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.59 E-value=3e-07 Score=93.43 Aligned_cols=184 Identities=6% Similarity=0.176 Sum_probs=116.0
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcc-cCChhHHHHHHHHHHHhCcceEEeecCCCcCCCCC-C--cchHHhh
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGREE-S--PSLAEAF 158 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~~~-~--~s~~~~~ 158 (365)
++|.|.|+|...|--. +.+++.+.+..-. ...+ .. -++..+...+....... +++ . +......
T Consensus 2 ~rVvITG~G~vsp~G~----~~~~~w~~l~~G~sgi~~-----~~-~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~~~ 68 (406)
T PRK07967 2 RRVVITGLGIVSSIGN----NQQEVLASLREGRSGITF-----SP-EFAEMGMRSQVWGNVKL---DPTGLIDRKVMRFM 68 (406)
T ss_pred CcEEEEcceEECCCCC----CHHHHHHHHHcCCCceeE-----CC-cccccCCCCceEEEcCC---ChhhcCCHHHhhcC
Confidence 5799999999999985 8899988764210 0000 00 01122333332211110 110 0 0111122
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCC-----ccEEEEeecCCC--------------------------CCC-cHHHHHHHH
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSE-----IDVLVVNVSLFS--------------------------PAP-SLTSRIINR 206 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~d-----ID~LIv~ss~~~--------------------------~~P-s~a~~v~~~ 206 (365)
.....++..|+++||+++|+++++ ++.++-++.... ..| ..+..|+..
T Consensus 69 ~r~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~ 148 (406)
T PRK07967 69 GDASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATP 148 (406)
T ss_pred CHHHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHH
Confidence 335578889999999999987543 433333321110 011 256779999
Q ss_pred cCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCC----Cc-------------------CCCCc
Q 017814 207 YNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN----WY-------------------CGREK 263 (365)
Q Consensus 207 LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~----~~-------------------~~~dr 263 (365)
+|+++ +.+.+.. +|++++.||..|.++|+.|..+.+||.++|..+.. |+ ++.+|
T Consensus 149 ~~l~G--p~~tvs~-aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r 225 (406)
T PRK07967 149 FKIKG--VNYSISS-ACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANR 225 (406)
T ss_pred HCCCC--Ccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCC
Confidence 99987 7888999 99999999999999999999999999999865421 10 01122
Q ss_pred chhhhhhhccCCeEEEEEeeccc
Q 017814 264 SMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 264 ~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
+ ..+.|+||+++||+..+.
T Consensus 226 ~----G~v~gEGaa~lvLe~~~~ 244 (406)
T PRK07967 226 D----GFVIAGGGGVVVVEELEH 244 (406)
T ss_pred C----ceeeeceEEEEEEeeHHH
Confidence 2 578899999999997554
No 112
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.58 E-value=1.5e-06 Score=88.13 Aligned_cols=190 Identities=12% Similarity=0.089 Sum_probs=116.7
Q ss_pred cCCCCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcc---cCChhHHHHHHHHHHHhCc-ceEEeecCCCcCCCCCCcchH
Q 017814 80 KRGQCCYMLAYECYKPCDETRRLDTESCARVVWRNK---KLGLEEYRFLLKNMVSSGI-GEETYGPRNVVEGREESPSLA 155 (365)
Q Consensus 80 ~r~~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~---~~~~~~~~~~~ri~~~sGI-~~R~~~~~~~~~~~~~~~s~~ 155 (365)
..+++|.|.|+|+..|--. +.+++.+.+..-. .++..... . ..++. ++-.+ + ...+.. ...
T Consensus 3 ~~~~rVvITGiG~vsp~G~----~~e~~w~aL~~G~sg~~~~~~~~~---~--~~~~~~~~~~~--~--~~~~~~--~~~ 67 (398)
T PRK06519 3 MQPNDVVITGIGLVSSLGE----GLDAHWNALSAGRPQPNVDTETFA---P--YPVHPLPEIDW--S--QQIPKR--GDQ 67 (398)
T ss_pred CCCCCEEEEcceEECCCCC----CHHHHHHHHHcCCCCCCCCccccc---C--cCcccccccCh--h--hcCCch--hhh
Confidence 3467899999999999885 8899998774321 11110000 0 00000 00000 0 000000 011
Q ss_pred HhhhhHHHHHHHHHHHHHHhCCCCC-----CCccEEEEeecCCC-----------------------------CCC----
Q 017814 156 EAFSEMDEIIFDTLDKLFARTDISP-----SEIDVLVVNVSLFS-----------------------------PAP---- 197 (365)
Q Consensus 156 ~~~e~a~~La~~A~~~aL~~agi~p-----~dID~LIv~ss~~~-----------------------------~~P---- 197 (365)
........++..|+++||+++|+++ ++++.++-++.... ..|
T Consensus 68 r~~~r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 147 (398)
T PRK06519 68 RQMETWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFL 147 (398)
T ss_pred hccCHHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhh
Confidence 1123456789999999999999854 34545554432210 011
Q ss_pred -----cHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCC-C---------CCcC-C-
Q 017814 198 -----SLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMG-P---------NWYC-G- 260 (365)
Q Consensus 198 -----s~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S-~---------~~~~-~- 260 (365)
..+..|+..+|+++ +.+.+.+ +|+++..||..|.++|++|..+.+||.++|... . .+.. +
T Consensus 148 ~~~~n~~a~~is~~~gl~G--p~~ti~~-acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~ 224 (398)
T PRK06519 148 AQLSNLLAGNISIVHKVTG--SSRTFMG-EESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGG 224 (398)
T ss_pred hhhhhHHHHHHHHHhCCCC--ccccccC-CccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCC
Confidence 24567889999997 8889999 999999999999999999999999999998632 1 0000 0
Q ss_pred ----CCcc-hhhhhhhccCCeEEEEEeecccc
Q 017814 261 ----REKS-MMLSNILFRSGGCSMLLTNNRAL 287 (365)
Q Consensus 261 ----~dr~-~lv~~~LFgDGAAAvlLs~~~~~ 287 (365)
.|+. .-=...+.|+||+++||++.+..
T Consensus 225 ~~p~~d~~~~~r~G~v~GEGAa~lvLE~~~~A 256 (398)
T PRK06519 225 WAPVWSRGGEDGGGFILGSGGAFLVLESREHA 256 (398)
T ss_pred CCchhccCccCCCCeeeeceEEEEEEeeHHHH
Confidence 1110 00026788999999999986643
No 113
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.55 E-value=3.8e-07 Score=94.95 Aligned_cols=93 Identities=13% Similarity=0.058 Sum_probs=76.5
Q ss_pred hHHHHHHHHHHHHHHhCCCC--CCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDIS--PSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~--p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll 237 (365)
+..+|+.+|+++||+++|++ ++|||.+++..............+++++|+.+ ........ ||+++..++..|...+
T Consensus 26 s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p-~~~~~~~~-GG~s~~~~v~~Aa~~I 103 (498)
T PRK08257 26 EPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADP-ARTVYSPV-GGNSPQRLVNEAALRI 103 (498)
T ss_pred CHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCC-cceeEecC-CCHHHHHHHHHHHHHH
Confidence 35699999999999999999 99999998743222223344678999999987 55555555 8888999999999999
Q ss_pred HcccCCeEEEEEeccCC
Q 017814 238 RTYKNKLAIVVSTESMG 254 (365)
Q Consensus 238 ~ag~~~~aLVV~~E~~S 254 (365)
++|..+.|||+++|.++
T Consensus 104 asG~advVLv~G~E~~~ 120 (498)
T PRK08257 104 AAGEADVALVAGAEAQS 120 (498)
T ss_pred HCCCCCEEEEeeeeecc
Confidence 99999999999999864
No 114
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.53 E-value=3e-06 Score=86.47 Aligned_cols=188 Identities=8% Similarity=0.037 Sum_probs=116.0
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcc-cCChhHHHHHHHHHHHhCcceEE--eecCCCcCCCCC-CcchHHhh
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEET--YGPRNVVEGREE-SPSLAEAF 158 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~R~--~~~~~~~~~~~~-~~s~~~~~ 158 (365)
++|.|+|+|+..|--. +.+++.+.+..-. ...+-.. .-.++.++..+. ..+++. ++. .+......
T Consensus 12 ~~VvItGig~~sp~g~----~~~~~w~~L~~G~s~i~~~~~----~~~~~~~~~~~~~g~i~~~~---d~~~~~~~~~~~ 80 (418)
T PRK07910 12 PNVVVTGIAMTTALAT----DAETTWKLLLDGQSGIRTLDD----PFVEEFDLPVRIGGHLLEEF---DHQLTRVELRRM 80 (418)
T ss_pred CCEEEEeeEEECCCCC----CHHHHHHHHHcCCCeeEeCCh----hhhhccCCCcceEEEeccCc---cccCCHHHHhhc
Confidence 6899999999999984 8899998875321 0100000 001122222221 111110 110 01111122
Q ss_pred hhHHHHHHHHHHHHHHhCCC---CCCCccEEEEeecCCC-------------------------CCC-cHHHHHHHHcCC
Q 017814 159 SEMDEIIFDTLDKLFARTDI---SPSEIDVLVVNVSLFS-------------------------PAP-SLTSRIINRYNL 209 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi---~p~dID~LIv~ss~~~-------------------------~~P-s~a~~v~~~LGL 209 (365)
.....++..|+++||+++|+ +++.++.++-++.... ..| ..+..+...+|+
T Consensus 81 d~~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 160 (418)
T PRK07910 81 SYLQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA 160 (418)
T ss_pred cHHHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC
Confidence 34556888999999999996 4556655543332110 011 245667888888
Q ss_pred CCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCC-----C-------c-----CC-----CCcchhh
Q 017814 210 RNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN-----W-------Y-----CG-----REKSMML 267 (365)
Q Consensus 210 ~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~-----~-------~-----~~-----~dr~~lv 267 (365)
++ +.+.+.. +|++++.||..|.++|++|..+.++|.++|..... | . ++ -|+. =
T Consensus 161 ~G--~~~ti~t-aCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~--~ 235 (418)
T PRK07910 161 KA--GVITPVS-ACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKD--R 235 (418)
T ss_pred CC--Ccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCC--C
Confidence 87 6778888 99999999999999999999999999999974210 0 0 00 0111 0
Q ss_pred hhhhccCCeEEEEEeeccc
Q 017814 268 SNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 268 ~~~LFgDGAAAvlLs~~~~ 286 (365)
...++|+|++++||.+...
T Consensus 236 ~G~v~gEGaa~vvLe~~~~ 254 (418)
T PRK07910 236 DGFVFGEGGALMVIETEEH 254 (418)
T ss_pred CCEeeeceEEEEEEeeHHH
Confidence 2688999999999998654
No 115
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=98.50 E-value=4.8e-07 Score=90.63 Aligned_cols=89 Identities=17% Similarity=0.173 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcc
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag 240 (365)
+.+|+..|++++++ |++ +|||.+|+.+... ..+..+..++..+|++..++.+.++. +|++|..|+..|.+.+++|
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~-~~~~~~r~~~~~~Gl~~~~p~~tV~~-~CaSG~~Ai~~a~~~I~sG 99 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVG-PGGNVARLSALEAGLGLHIPGVTIDR-QCGAGLEAIRTACHFIQGG 99 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCC-CcchHHHHHHHHcCCCCCCCceehhh-hhhHHHHHHHHHHHHHHCC
Confidence 57999999999865 886 8999999954332 13455556889999985699999999 9999999999999999999
Q ss_pred cCCeEEEEEeccCC
Q 017814 241 KNKLAIVVSTESMG 254 (365)
Q Consensus 241 ~~~~aLVV~~E~~S 254 (365)
..+.+|++++|.+|
T Consensus 100 ~~d~~l~gG~E~ms 113 (361)
T PRK06690 100 AGKCYIAGGVESTS 113 (361)
T ss_pred CCCEEEEecccccc
Confidence 99999999999987
No 116
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.49 E-value=1.5e-06 Score=87.62 Aligned_cols=169 Identities=12% Similarity=0.183 Sum_probs=109.6
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeec--CCCc--CCCCCCcchHHhh
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGP--RNVV--EGREESPSLAEAF 158 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~--~~~~--~~~~~~~s~~~~~ 158 (365)
++|.|.|+|...|-- . .+++.+.+..- ++||+.-+-.. +... .... .+
T Consensus 2 ~rVvITG~G~vsp~G----~-~~~~~~~l~~G----------------~sgi~~~~~~~~~~~~~~~~~~~-~~------ 53 (381)
T PRK05952 2 MKVVVTGIGLVSALG----D-LEQSWQRLLQG----------------KSGIKLHQPFPELPPLPLGLIGN-QP------ 53 (381)
T ss_pred CeEEEEeeEEECccc----C-HHHHHHHHHcC----------------CCCeEeCCcccccccccceeecc-cc------
Confidence 369999999999877 5 68887765321 24444211000 0000 0000 00
Q ss_pred hhHHHHHHHHHHHHHHhCCCCC--CCccEEEEeecCC--------------------C--------CCC-cHHHHHHHHc
Q 017814 159 SEMDEIIFDTLDKLFARTDISP--SEIDVLVVNVSLF--------------------S--------PAP-SLTSRIINRY 207 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p--~dID~LIv~ss~~--------------------~--------~~P-s~a~~v~~~L 207 (365)
.....++..|+++||+++|+++ ++++.++-++... . ..| ..+..++..+
T Consensus 54 ~~~~~~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~ 133 (381)
T PRK05952 54 SSLEDLTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQI 133 (381)
T ss_pred ccccHHHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHh
Confidence 0122355688999999999964 4565444332110 0 012 2456788999
Q ss_pred CCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEecc-CCCC----Cc------------CCCCcchhhhhh
Q 017814 208 NLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTES-MGPN----WY------------CGREKSMMLSNI 270 (365)
Q Consensus 208 GL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~-~S~~----~~------------~~~dr~~lv~~~ 270 (365)
|+++ +++.+.. +|++++.||..|.++|+.|..+.+||.++|. .+.. |+ ++.+++ ..
T Consensus 134 ~~~G--p~~ti~~-aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r~----G~ 206 (381)
T PRK05952 134 GTQG--PVLAPMA-ACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQRE----GL 206 (381)
T ss_pred CCCC--ccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCCC----Cc
Confidence 9987 7899999 9999999999999999999999999999996 3310 10 011222 57
Q ss_pred hccCCeEEEEEeeccc
Q 017814 271 LFRSGGCSMLLTNNRA 286 (365)
Q Consensus 271 LFgDGAAAvlLs~~~~ 286 (365)
++||||+++||++.+.
T Consensus 207 v~gEGaa~lvLe~~~~ 222 (381)
T PRK05952 207 VLGEGGAILVLESAEL 222 (381)
T ss_pred cccccEEEEEEeeHHH
Confidence 8999999999998654
No 117
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.46 E-value=6.5e-07 Score=91.16 Aligned_cols=120 Identities=10% Similarity=0.132 Sum_probs=87.6
Q ss_pred hHHHHHHHHHHHHHHhCCCC-CCCccE----EEEeecCCCC--------------------------CC-cHHHHHHHHc
Q 017814 160 EMDEIIFDTLDKLFARTDIS-PSEIDV----LVVNVSLFSP--------------------------AP-SLTSRIINRY 207 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~-p~dID~----LIv~ss~~~~--------------------------~P-s~a~~v~~~L 207 (365)
....++..|+++||+++|++ +++++. +++.++.+.. .+ ..+..+...+
T Consensus 76 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~ 155 (421)
T PTZ00050 76 RATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKH 155 (421)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHh
Confidence 45689999999999999998 666653 3332211100 01 2455678889
Q ss_pred CCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCC---------------Cc---------CCCCc
Q 017814 208 NLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN---------------WY---------CGREK 263 (365)
Q Consensus 208 GL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~---------------~~---------~~~dr 263 (365)
|+++ +.+.+.. +|++++.||..|.++|++|..+.+||+++|..... +. ++.++
T Consensus 156 ~l~G--p~~ti~~-aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~ 232 (421)
T PTZ00050 156 KLKG--PSGSAVT-ACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR 232 (421)
T ss_pred CCCC--ccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC
Confidence 9987 7889999 99999999999999999999999999999974211 00 01122
Q ss_pred chhhhhhhccCCeEEEEEeeccc
Q 017814 264 SMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 264 ~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
. ..+.||||+|+||.+.+.
T Consensus 233 ~----G~~~gEGAaalvLe~~~~ 251 (421)
T PTZ00050 233 A----GFVMGEGAGILVLEELEH 251 (421)
T ss_pred C----CEeeccceEEEEEeeHHH
Confidence 2 567899999999998654
No 118
>PRK07855 lipid-transfer protein; Provisional
Probab=98.43 E-value=8.1e-07 Score=89.69 Aligned_cols=85 Identities=12% Similarity=0.088 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcc
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag 240 (365)
..+|+.+|+++||+++|++++|||.+++.+.. ..+ ...+++.+|+++-.+..++.. ||+++..++..|...+++|
T Consensus 24 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~--~~~l~~~lGl~~~~~~~~v~~-gg~sg~~~~~~A~~~I~sG 98 (386)
T PRK07855 24 ELRLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNP--EIAVARALGIGELKFFSRIHY-GGGAACATVQQAAMAVATG 98 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc--ccc--HHHHHHHCCCCCCcceeeecC-CcHHHHHHHHHHHHHHHCC
Confidence 45899999999999999999999999873321 222 256889999976345568888 9999999999999999999
Q ss_pred cCCeEEEEEe
Q 017814 241 KNKLAIVVST 250 (365)
Q Consensus 241 ~~~~aLVV~~ 250 (365)
.++.|||+++
T Consensus 99 ~~d~vLv~g~ 108 (386)
T PRK07855 99 VADVVVCYRA 108 (386)
T ss_pred CCCEEEEEee
Confidence 9999999987
No 119
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=98.39 E-value=1.6e-06 Score=87.53 Aligned_cols=90 Identities=8% Similarity=0.131 Sum_probs=70.3
Q ss_pred hHHHHHHHHHHHHHHhCC-CCC-CCccEEEEeecCCC-CCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTD-ISP-SEIDVLVVNVSLFS-PAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~ag-i~p-~dID~LIv~ss~~~-~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~l 236 (365)
+..+|+.+|+++||+++| +++ +|||.+++++.... ........++..+|+.+ .+.+.+ |+++..++..|...
T Consensus 24 s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~-~~~~~v----~~sg~~a~~~A~~a 98 (385)
T PRK06066 24 SFREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAM-RPTMTV----AGDGLQGLAHAVMH 98 (385)
T ss_pred CHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCC-CCeEEE----eCcHHHHHHHHHHH
Confidence 356999999999999999 998 79999987432111 12222345778999864 455554 78899999999999
Q ss_pred HHcccCCeEEEEEeccCC
Q 017814 237 FRTYKNKLAIVVSTESMG 254 (365)
Q Consensus 237 l~ag~~~~aLVV~~E~~S 254 (365)
+++|.+++|||++.|+++
T Consensus 99 V~sG~~d~vLv~g~~~~~ 116 (385)
T PRK06066 99 INSGLANVVVVEAHSKPS 116 (385)
T ss_pred HHcCCCCEEEEEEEeecc
Confidence 999999999999999754
No 120
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.36 E-value=3.7e-06 Score=83.67 Aligned_cols=119 Identities=9% Similarity=0.092 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHhCCC--CCCCccEEEEeecCCC-----------------CCC---------cHHHHHHHHcCCCCC
Q 017814 161 MDEIIFDTLDKLFARTDI--SPSEIDVLVVNVSLFS-----------------PAP---------SLTSRIINRYNLRND 212 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi--~p~dID~LIv~ss~~~-----------------~~P---------s~a~~v~~~LGL~~~ 212 (365)
...++..|+++|++++|+ ++++++.++-++.... ..| ..+..+...+|+++
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~G- 82 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKG- 82 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCC-
Confidence 346788999999999996 6677776665431110 011 35677888999998
Q ss_pred ceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCC-----C----------c--C-------CCCcchhhh
Q 017814 213 IKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN-----W----------Y--C-------GREKSMMLS 268 (365)
Q Consensus 213 v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~-----~----------~--~-------~~dr~~lv~ 268 (365)
+++.+.. +|++++.||..|.++|+.|..+.+||.++|..... | . + +.+|+
T Consensus 83 -p~~ti~~-aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r~---- 156 (342)
T PRK14691 83 -PIGAPVT-ACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARD---- 156 (342)
T ss_pred -Ccccccc-HhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCCC----
Confidence 8888999 99999999999999999999999999999974210 1 0 0 11222
Q ss_pred hhhccCCeEEEEEeeccc
Q 017814 269 NILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 269 ~~LFgDGAAAvlLs~~~~ 286 (365)
..++||||+++||.....
T Consensus 157 G~v~gEGAa~lvLes~~~ 174 (342)
T PRK14691 157 GFVMGEGAGLLIIEELEH 174 (342)
T ss_pred CccccceEEEEEEeeHHH
Confidence 678999999999997654
No 121
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=98.20 E-value=2.9e-06 Score=82.53 Aligned_cols=94 Identities=18% Similarity=0.200 Sum_probs=86.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEE-eecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVV-NVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv-~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
.+.+|+.-|++.+|++++++|+|++-+|. +....+.....+...+---||+.+++++.++- .|++|+.|+-+|.+-++
T Consensus 29 ~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvNk-vCaSgmKAv~laaQsI~ 107 (396)
T KOG1390|consen 29 TATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVNK-VCASGMKAVILAAQSIQ 107 (396)
T ss_pred chhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeehh-hhhhhHHHHHHHHHHHh
Confidence 47799999999999999999999999998 55555666777888888889999999999988 99999999999999999
Q ss_pred cccCCeEEEEEeccCC
Q 017814 239 TYKNKLAIVVSTESMG 254 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S 254 (365)
.|..+.++..+.|.||
T Consensus 108 ~G~~divVaGGmEsMS 123 (396)
T KOG1390|consen 108 TGHADIVVAGGMESMS 123 (396)
T ss_pred cCCccEEEecccchhc
Confidence 9999999999999999
No 122
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=98.19 E-value=5.4e-06 Score=83.95 Aligned_cols=94 Identities=15% Similarity=0.268 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHhC--CCCCCCccEEEEeecC--CCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHH
Q 017814 161 MDEIIFDTLDKLFART--DISPSEIDVLVVNVSL--FSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 161 a~~La~~A~~~aL~~a--gi~p~dID~LIv~ss~--~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~l 236 (365)
++++.....+..+++. ++++.+||.+|..|.. +...+..+..++...|++.+++.+.++. +|++|+.|+..|.+.
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~~-~c~SG~~Av~~A~~~ 105 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVNR-ACASGLAAVRLAAQA 105 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEec-cchhHHHHHHHHHHH
Confidence 3455555555555433 6888888888884322 3356788999999999998899999999 999999999999999
Q ss_pred HHcccCCeEEEEEeccCCC
Q 017814 237 FRTYKNKLAIVVSTESMGP 255 (365)
Q Consensus 237 l~ag~~~~aLVV~~E~~S~ 255 (365)
+++|..+.+|+++.|++|.
T Consensus 106 I~sG~~dvvlagG~E~mS~ 124 (392)
T COG0183 106 IASGEADVVLAGGVEKMSD 124 (392)
T ss_pred HHCCCCCEEEEEeeeeccC
Confidence 9999999999999999994
No 123
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.19 E-value=1.1e-05 Score=90.83 Aligned_cols=190 Identities=17% Similarity=0.175 Sum_probs=124.2
Q ss_pred CeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcc----cCChhHHHHHHHHHHHhC-----cceEEeec-----CCCcCCCC
Q 017814 84 CCYMLAYECYKPCDETRRLDTESCARVVWRNK----KLGLEEYRFLLKNMVSSG-----IGEETYGP-----RNVVEGRE 149 (365)
Q Consensus 84 ~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~----~~~~~~~~~~~ri~~~sG-----I~~R~~~~-----~~~~~~~~ 149 (365)
+|-|+|++|-+|.- -+.+++.+.+..-. .++++ +|=.+..+ ...++|.. ++....++
T Consensus 5 ~IAIiGm~~rfPga----~~~~~~W~~l~~g~~~i~~ip~~-----rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~ 75 (1061)
T COG3321 5 PIAIIGMACRFPGA----DSPEEFWDLLKEGRDEITEVPAD-----RWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDA 75 (1061)
T ss_pred cEEEEeccccCCCC----CCHHHHHHHHhcCCceeeecChh-----hhhHhhccCCccccccccccccccccCCccccCH
Confidence 49999999999995 48999999886432 11112 11122222 22222221 11111111
Q ss_pred C----CcchHHhhhhHHHHHHHHHHHHHHhCCCCCCCcc----EEEEe-ecCCCCCC-------------------cHHH
Q 017814 150 E----SPSLAEAFSEMDEIIFDTLDKLFARTDISPSEID----VLVVN-VSLFSPAP-------------------SLTS 201 (365)
Q Consensus 150 ~----~~s~~~~~e~a~~La~~A~~~aL~~agi~p~dID----~LIv~-ss~~~~~P-------------------s~a~ 201 (365)
. .|+.++..+.-..|..+.+.+||+++|+.|+.+. .|+.. +..++... -.+.
T Consensus 76 ~fFgisPrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~ 155 (1061)
T COG3321 76 LFFGISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAG 155 (1061)
T ss_pred HHcCCCHHHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHH
Confidence 1 1345556666677999999999999999998887 45543 33333322 1567
Q ss_pred HHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCC-CC-Cc---------C-CCCc--chhh
Q 017814 202 RIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMG-PN-WY---------C-GREK--SMML 267 (365)
Q Consensus 202 ~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S-~~-~~---------~-~~dr--~~lv 267 (365)
+++..||+++ +++.|.. +||+++.|+++|.+.|+.|.++.||+-++...- .. ++ . ++-+ +.--
T Consensus 156 Risy~l~l~G--Ps~~vdt-aCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~a 232 (1061)
T COG3321 156 RISYVLGLSG--PSVTVDT-ACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADA 232 (1061)
T ss_pred HHHHHhcCCC--CCccccc-hhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCC
Confidence 8889999987 8999999 999999999999999999999999998887653 11 11 0 0000 0011
Q ss_pred hhhhccCCeEEEEEeecc
Q 017814 268 SNILFRSGGCSMLLTNNR 285 (365)
Q Consensus 268 ~~~LFgDGAAAvlLs~~~ 285 (365)
..++.|.|+++++|-+-.
T Consensus 233 dG~v~geG~g~vvLKrl~ 250 (1061)
T COG3321 233 DGYVRGEGAGVVVLKRLS 250 (1061)
T ss_pred CCEEEeeeEEEEEEEEhH
Confidence 267899999999997643
No 124
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.15 E-value=2.5e-05 Score=94.41 Aligned_cols=192 Identities=10% Similarity=0.082 Sum_probs=117.6
Q ss_pred CCCCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcc----cCChhHHHHHHHHHH-------HhCcceEEeecCCCcCCCC
Q 017814 81 RGQCCYMLAYECYKPCDETRRLDTESCARVVWRNK----KLGLEEYRFLLKNMV-------SSGIGEETYGPRNVVEGRE 149 (365)
Q Consensus 81 r~~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~----~~~~~~~~~~~ri~~-------~sGI~~R~~~~~~~~~~~~ 149 (365)
...+|-|+|+||..|.-. +.+++++.+..-. ...++..+ ....+. ++-.+.-.+. ++.. .++
T Consensus 5 ~~~~IAIvGmg~~~P~a~----~~~~fW~~L~~G~~~i~~ip~~rw~-~~~~~~~~~~~~~~~~~~~ggfl-~~v~-FD~ 77 (2582)
T TIGR02813 5 KDMPIAIVGMASIFANSR----YLNKFWDLIFEKIDAITDVPSDHWA-KDDYYDSDKSEADKSYCKRGGFL-PEVD-FNP 77 (2582)
T ss_pred CCCCEEEEeeeeeCCCCC----CHHHHHHHHHcCCCccCCCChhhCC-hhhccCccccccCCcccceeEec-CccC-CCH
Confidence 446899999999999864 8899998774321 01111000 000000 0000111111 1111 111
Q ss_pred C----CcchHHhhhhHHHHHHHHHHHHHHhCCCC----CCCccEEEEeecCCC---------------------------
Q 017814 150 E----SPSLAEAFSEMDEIIFDTLDKLFARTDIS----PSEIDVLVVNVSLFS--------------------------- 194 (365)
Q Consensus 150 ~----~~s~~~~~e~a~~La~~A~~~aL~~agi~----p~dID~LIv~ss~~~--------------------------- 194 (365)
. .|.-.+..+....++.+++.+||+++|+. .+.++.++-++....
T Consensus 78 ~~F~i~p~ea~~mDpqqrl~L~~a~eALedAG~~~~~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (2582)
T TIGR02813 78 MEFGLPPNILELTDISQLLSLVVAKEVLNDAGLPDGYDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDED 157 (2582)
T ss_pred hhcCCCHHHHHhcCHHHHHHHHHHHHHHHhCCCCCCCCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhh
Confidence 0 01222234455678999999999999984 345554443322100
Q ss_pred ------------------CCC-----cHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEec
Q 017814 195 ------------------PAP-----SLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTE 251 (365)
Q Consensus 195 ------------------~~P-----s~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E 251 (365)
..| ..+.+|++.+|+++ +++.+.. +|++++.||.+|.+.|++|.++.+|+.|++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~G--ps~tVdt-ACsSSL~Al~~A~~~L~~G~~D~alvGGv~ 234 (2582)
T TIGR02813 158 SEMLIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGG--MNCVVDA-ACAGSLAAIRMALSELLEGRSEMMITGGVC 234 (2582)
T ss_pred HHHhhhhhcccccccCccccccccccHHHHHHHHHhCCCC--Ccccccc-hhHHHHHHHHHHHHHHHcCCCCEEEEecce
Confidence 011 24678999999998 8999999 999999999999999999999999999988
Q ss_pred cCCC-C----C------cC-C-----CCcchhhhhhhccCCeEEEEEeecc
Q 017814 252 SMGP-N----W------YC-G-----REKSMMLSNILFRSGGCSMLLTNNR 285 (365)
Q Consensus 252 ~~S~-~----~------~~-~-----~dr~~lv~~~LFgDGAAAvlLs~~~ 285 (365)
.... . | .. + +...+ ..+.|+|++++||.+-.
T Consensus 235 ~~~~p~~~~~fs~~~~lS~~g~crpFD~~ad---G~v~GEGag~vvLkrL~ 282 (2582)
T TIGR02813 235 TDNSPFMYMSFSKTPAFTTNEDIQPFDIDSK---GMMIGEGIGMMALKRLE 282 (2582)
T ss_pred eeCCHHHHHHHHhccCcCCCCCccCCCCCCC---cccccceEEEEEeCcHH
Confidence 6321 0 0 00 0 11222 67899999999998644
No 125
>PRK07937 lipid-transfer protein; Provisional
Probab=98.01 E-value=2.7e-05 Score=77.79 Aligned_cols=89 Identities=15% Similarity=0.069 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCC-CcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcc
Q 017814 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPA-PSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (365)
Q Consensus 162 ~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~-Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag 240 (365)
.+|+.+|+++||+++|++++|||.++..++..... ......+...+|+.+..+...+.+ +|..++..|...+++|
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~----~g~~a~~~A~~aI~sG 100 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSSDYLAGRAFSFISAIDSIGAVPPINESHVEM----DAAWALYEAWVKLLTG 100 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEccccccccccchhhHHhhccCCCCCceEEecC----cHHHHHHHHHHHHhcC
Confidence 58999999999999999999999886433211111 112234567788854355555554 4778999999999999
Q ss_pred cCCeEEEEEeccCC
Q 017814 241 KNKLAIVVSTESMG 254 (365)
Q Consensus 241 ~~~~aLVV~~E~~S 254 (365)
..++|||++.|+++
T Consensus 101 ~~d~VLv~g~~k~~ 114 (352)
T PRK07937 101 EVDTALVYGFGKSS 114 (352)
T ss_pred CCCEEEEEEecccC
Confidence 99999999999764
No 126
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=97.99 E-value=0.00021 Score=69.53 Aligned_cols=120 Identities=13% Similarity=0.177 Sum_probs=77.0
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
+.-..|..+|++.||++++++++|||.++-.--.. . -..++..++.|+ ++-+-+.| +||....+|.+|..++.
T Consensus 49 kAE~~m~~~A~~~al~Ka~l~~~dId~~~aGDLln-Q-~i~s~f~ar~l~----iPf~Glyg-ACST~~e~l~laa~~vd 121 (329)
T PF07451_consen 49 KAESKMQKEAVELALKKAGLKKEDIDYLFAGDLLN-Q-IISSSFAARDLG----IPFLGLYG-ACSTMMESLALAAMLVD 121 (329)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGG-SEEEEEETTC-C-CCHHHHHHHHHT------EEEB---CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhh-h-hHHHHHHHHhcC----CCccchhh-HHHHHHHHHHHHHHHHh
Confidence 33457889999999999999999999998742222 2 245778888988 57789999 99999999999999999
Q ss_pred cccCCeEEEEEeccCC---CCCcC----CCCcchhhhhhhccCCeEEEEEeecccc
Q 017814 239 TYKNKLAIVVSTESMG---PNWYC----GREKSMMLSNILFRSGGCSMLLTNNRAL 287 (365)
Q Consensus 239 ag~~~~aLVV~~E~~S---~~~~~----~~dr~~lv~~~LFgDGAAAvlLs~~~~~ 287 (365)
+|-.++||+.++--.. ..|+. +..|.. ....---||+|+||++.+..
T Consensus 122 gg~a~~vla~tSSH~~tAERQfR~P~EyG~Qrp~--tAqwTVTGaGa~il~~~~~~ 175 (329)
T PF07451_consen 122 GGFADYVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAAILSKEGSG 175 (329)
T ss_dssp TTS-SEEEEEEEE-CCHHHHHT---GGGT----T--T--EE--EEEEEEEESS--S
T ss_pred CCCcceEEEEeccccchhhhhccCchhccCCCCC--cccEEEeceEEEEEecCCCC
Confidence 9999999888765433 22322 222221 13445678999999977653
No 127
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.85 E-value=0.00027 Score=72.07 Aligned_cols=179 Identities=11% Similarity=0.108 Sum_probs=115.6
Q ss_pred CCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEeecCCCcCCC--------CC--Cc
Q 017814 83 QCCYMLAYECYKPCDETRRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGR--------EE--SP 152 (365)
Q Consensus 83 ~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~--------~~--~~ 152 (365)
+.|.|.+++...|--. +.++..+.+... ++||..-+-..+...... ++ .+
T Consensus 3 ~rvviTG~g~vs~lG~----~~~~~~~~l~~g----------------~sgi~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 62 (412)
T COG0304 3 RRVVITGLGIVSSLGN----GVEEVWAALLAG----------------KSGIRPITRFDASGLGVKIAGEIKDLDDQIAK 62 (412)
T ss_pred ceEEEecceeeecccC----CHHHHHHHHhcC----------------CCCCCccccccccCCCCcccccccccccccch
Confidence 5789999999988775 777777655321 223332211111110000 00 00
Q ss_pred chHHhhhhHHHHHHHHHHHHHHhCCCC-CCCcc--EEEE--eecCCCC--------------------------CC-cHH
Q 017814 153 SLAEAFSEMDEIIFDTLDKLFARTDIS-PSEID--VLVV--NVSLFSP--------------------------AP-SLT 200 (365)
Q Consensus 153 s~~~~~e~a~~La~~A~~~aL~~agi~-p~dID--~LIv--~ss~~~~--------------------------~P-s~a 200 (365)
.-.........++..|+++|++++|++ ..+++ .-+. ++..+.. .| ..+
T Consensus 63 ~~~~~~d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a 142 (412)
T COG0304 63 KERRFMDRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAA 142 (412)
T ss_pred HHhhcccHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHH
Confidence 111245667899999999999999997 33443 2222 2111100 11 245
Q ss_pred HHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEecc-CC--------------CC-------Cc
Q 017814 201 SRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTES-MG--------------PN-------WY 258 (365)
Q Consensus 201 ~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~-~S--------------~~-------~~ 258 (365)
..++..+|+++ +.+.+.+ +|+++..|+..|.++|+.|..+.+++.++|. .+ .. .+
T Consensus 143 ~~vs~~~g~~G--~~~~~~t-ACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asr 219 (412)
T COG0304 143 GNVAIVFGLKG--PNYTPVT-ACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASR 219 (412)
T ss_pred HHHHHHhCCCC--CcCChhh-hHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCC
Confidence 66888999987 8889999 9999999999999999999999999999976 22 11 01
Q ss_pred C-CCCcchhhhhhhccCCeEEEEEeeccccc
Q 017814 259 C-GREKSMMLSNILFRSGGCSMLLTNNRALK 288 (365)
Q Consensus 259 ~-~~dr~~lv~~~LFgDGAAAvlLs~~~~~~ 288 (365)
+ +.+|+ ..++|.||+++||+..+...
T Consensus 220 Pfd~~Rd----Gfv~gEGag~lVLE~~ehA~ 246 (412)
T COG0304 220 PFDKNRD----GFVIGEGAGALVLEELEHAL 246 (412)
T ss_pred CCCCCCC----CEEEecceeEEEecChhhHH
Confidence 1 12344 68999999999999876543
No 128
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=97.81 E-value=2.1e-05 Score=74.95 Aligned_cols=88 Identities=18% Similarity=0.301 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccC
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~ 242 (365)
|++.+|+.+||+++++.-+||+--++.-.- ..-.-..+-.-++||.+ ++.+++++ +|++|-.||.+|++++++|..
T Consensus 31 d~a~ea~tkal~da~ikys~vqqa~vgyvf--gdstcgqraiyevgmtg-ipi~nvnn-ncatgssalflakqiiesgn~ 106 (408)
T KOG1406|consen 31 DFAKEAITKALQDAGIKYSEVQQAVVGYVF--GDSTCGQRAIYEVGMTG-IPIYNVNN-NCATGSSALFLAKQIIESGNS 106 (408)
T ss_pred hHHHHHHHHHHHhcCCCHHHHHhhhheeee--cCCccchHHHHhccccC-cceeeccC-ccccCchHHHHHHHHHhcCCc
Confidence 789999999999999999998866552111 11122344556999998 99999999 999999999999999999999
Q ss_pred CeEEEEEeccCC
Q 017814 243 KLAIVVSTESMG 254 (365)
Q Consensus 243 ~~aLVV~~E~~S 254 (365)
+.||..+.|+++
T Consensus 107 dcvlalgfekm~ 118 (408)
T KOG1406|consen 107 DCVLALGFEKME 118 (408)
T ss_pred ceEEeechhhhC
Confidence 999999999987
No 129
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.19 E-value=0.00061 Score=65.02 Aligned_cols=92 Identities=12% Similarity=0.144 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEE-e---ecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHH
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVV-N---VSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv-~---ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~l 236 (365)
+.+|..-|++.||+.+++.++.||++|+ | +|.+ .--++..+--+.|.+.++++..++- =|.+|..++-.+.+-
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsD--gIYl~RHvGL~~GvP~e~pALtiNR-LCGSGFQsiVNgaQ~ 104 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSD--GIYLARHVGLRVGVPKETPALTINR-LCGSGFQSIVNGAQE 104 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCC--ceEeeeccccccCCcCccCceeehh-hhcccHHHHHhhHHH
Confidence 6799999999999999999999999998 4 2332 1123444555667778899999999 999999999999999
Q ss_pred HHcccCCeEEEEEeccCCC
Q 017814 237 FRTYKNKLAIVVSTESMGP 255 (365)
Q Consensus 237 l~ag~~~~aLVV~~E~~S~ 255 (365)
+..+..+.||.-++|+||.
T Consensus 105 I~vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 105 ICVGEAEIVLCGGTENMSQ 123 (396)
T ss_pred hhcCcceEEEecCcccccc
Confidence 9999999999999999994
No 130
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=96.96 E-value=0.0015 Score=63.89 Aligned_cols=95 Identities=21% Similarity=0.280 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeecCC-CCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcc
Q 017814 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLF-SPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (365)
Q Consensus 162 ~~La~~A~~~aL~~agi~p~dID~LIv~ss~~-~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag 240 (365)
.+|...+.+..+++++++|+.|+-+++..... ...-+-+.+-+-.-|++..++...++- -|++|+.|+.....-+++|
T Consensus 62 DeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P~tvpv~tvNR-qCsSGLqaVadiA~~Ir~G 140 (435)
T KOG1389|consen 62 DELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFPETVPVRTVNR-QCSSGLQAVADIAAKIRAG 140 (435)
T ss_pred HHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCCcccchhhhhh-hhhhHHHHHHHHHHHHhcC
Confidence 47899999999999999999999999843222 122233444455679999899999999 9999999999999999999
Q ss_pred cCCeEEEEEeccCCCCC
Q 017814 241 KNKLAIVVSTESMGPNW 257 (365)
Q Consensus 241 ~~~~aLVV~~E~~S~~~ 257 (365)
.++.-|-.+.|.||.++
T Consensus 141 ~ydIGla~GvESMt~~~ 157 (435)
T KOG1389|consen 141 FYDIGLAAGVESMTTNY 157 (435)
T ss_pred ceeeecccchhhhcccC
Confidence 99999999999999765
No 131
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.31 E-value=0.014 Score=58.10 Aligned_cols=124 Identities=11% Similarity=0.166 Sum_probs=88.9
Q ss_pred HhhhhHHHHHHHHHHHHHHhCCCCCC---CccE-----EEEeecC---------------------CCCCC-----cHHH
Q 017814 156 EAFSEMDEIIFDTLDKLFARTDISPS---EIDV-----LVVNVSL---------------------FSPAP-----SLTS 201 (365)
Q Consensus 156 ~~~e~a~~La~~A~~~aL~~agi~p~---dID~-----LIv~ss~---------------------~~~~P-----s~a~ 201 (365)
........++..|+++||+++|+.+. +.|. +|-++-. .+..| ..+.
T Consensus 89 r~ms~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag 168 (440)
T KOG1394|consen 89 RRMSKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAG 168 (440)
T ss_pred hhhhHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccc
Confidence 34457789999999999999998765 2222 2211100 01122 3466
Q ss_pred HHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCC-----C-----------cC------
Q 017814 202 RIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPN-----W-----------YC------ 259 (365)
Q Consensus 202 ~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~-----~-----------~~------ 259 (365)
+|+-++|+++ +...++. +|++|..++--|..+++.|..+..|.-++|.+-.. | ++
T Consensus 169 ~vsm~~gl~G--pnhsvST-ACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRP 245 (440)
T KOG1394|consen 169 YVSMKYGLRG--PNHSVST-ACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRP 245 (440)
T ss_pred hhhhhhcCcC--CchhhHh-hhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCC
Confidence 7899999987 7788888 99999999999999999999999999999975411 1 01
Q ss_pred -CCCcchhhhhhhccCCeEEEEEeeccc
Q 017814 260 -GREKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 260 -~~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
+.+|+ .+++|.|++.+||+.=+.
T Consensus 246 fD~~Rd----GFVmGEGagvlvlEelEH 269 (440)
T KOG1394|consen 246 FDKKRD----GFVMGEGAGVLVLEELEH 269 (440)
T ss_pred CccCCC----ceeeccceeEEehHhHHH
Confidence 11233 688999999999976443
No 132
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=96.04 E-value=0.0071 Score=48.04 Aligned_cols=75 Identities=16% Similarity=0.224 Sum_probs=47.5
Q ss_pred HHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEe---cCCccchHHHHHHHHHHHHHcccCCeEEEEE
Q 017814 173 FARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNL---SGMGCSASVVAVDLVQQLFRTYKNKLAIVVS 249 (365)
Q Consensus 173 L~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l---~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~ 249 (365)
|+++|++++|||.++... ........+++++|++++....++ ++++|++-..+|..+.+-=+..+.+++|+++
T Consensus 1 L~~~g~~~~did~~i~hq----~~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQ----ASKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-S----SSHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCC----CCHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 689999999999999842 233445568899999876444433 3456666677776665533345678898887
Q ss_pred ec
Q 017814 250 TE 251 (365)
Q Consensus 250 ~E 251 (365)
.-
T Consensus 77 ~G 78 (90)
T PF08541_consen 77 FG 78 (90)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 133
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=95.54 E-value=0.01 Score=57.59 Aligned_cols=93 Identities=14% Similarity=0.193 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEee-cCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHc
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNV-SLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRT 239 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~s-s~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~a 239 (365)
..||+.+|+..+|+++.++.+.||++|+.+ -...-+.+.+..-+-.-|.+..+++-.+.. +|-+.-.|+-....+++.
T Consensus 66 phdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvtm-acissn~amttgmgliat 144 (465)
T KOG1392|consen 66 PHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVTM-ACISSNVAMTTGMGLIAT 144 (465)
T ss_pred hhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceeee-ehhccchhhhccceeEee
Confidence 569999999999999999999999999843 233345667777777788887788877766 999999999999999999
Q ss_pred ccCCeEEEEEeccCC
Q 017814 240 YKNKLAIVVSTESMG 254 (365)
Q Consensus 240 g~~~~aLVV~~E~~S 254 (365)
|.++.++.-++|.+|
T Consensus 145 g~~dvivaggvelms 159 (465)
T KOG1392|consen 145 GNADVIVAGGVELMS 159 (465)
T ss_pred CCcCEEEEcceeecc
Confidence 999999999999998
No 134
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=95.53 E-value=0.06 Score=54.16 Aligned_cols=92 Identities=12% Similarity=0.170 Sum_probs=63.2
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHc-----CCCCCceE---EEecCCccchHHHHH
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRY-----NLRNDIKA---FNLSGMGCSASVVAV 230 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~L-----GL~~~v~~---~~l~~mGCsgg~~AL 230 (365)
+.+.+...++++++|++.|++++|||.++... +.+..-..++++| |++++... -+.++++|++-..+|
T Consensus 268 ~~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq----~n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L 343 (378)
T PRK06816 268 ENIVVYTIKPLLELVDKRNLDPDDIDYFLPHY----SSEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIML 343 (378)
T ss_pred HHhHHHHHHHHHHHHHHcCCChhhCCEEeeCc----ccHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHH
Confidence 44556668899999999999999999999742 3344555677776 88764322 245666777777777
Q ss_pred HHHHHHHHcccCCeEEEEEeccCC
Q 017814 231 DLVQQLFRTYKNKLAIVVSTESMG 254 (365)
Q Consensus 231 ~lA~~ll~ag~~~~aLVV~~E~~S 254 (365)
..|.+-=+-.+++++++.+.|.-.
T Consensus 344 ~~a~~~g~~~~Gd~vl~~~~~s~~ 367 (378)
T PRK06816 344 DELLNSGRLKPGQKILCFVPESGR 367 (378)
T ss_pred HHHHHcCCCCCCCEEEEEEecccc
Confidence 766442222457888888877543
No 135
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=95.48 E-value=0.046 Score=54.36 Aligned_cols=83 Identities=12% Similarity=0.147 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEE-----EecCCccchHHHHHHHHHH
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAF-----NLSGMGCSASVVAVDLVQQ 235 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~-----~l~~mGCsgg~~AL~lA~~ 235 (365)
....+.++++++|+++|++++|||.++... +.+.+-..++++||++++.... +.+++++++-..+|..+..
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq----~~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~ 281 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQ----PNGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD 281 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCC----CChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH
Confidence 344556889999999999999999999852 3344566689999998643322 6677788888888877765
Q ss_pred HHHcccCCeEEEEE
Q 017814 236 LFRTYKNKLAIVVS 249 (365)
Q Consensus 236 ll~ag~~~~aLVV~ 249 (365)
. ..+.+++|+++
T Consensus 282 ~--~~~Gd~vll~~ 293 (345)
T TIGR00748 282 I--AEPGDRILAVS 293 (345)
T ss_pred h--cCCCCEEEEEE
Confidence 3 33556666665
No 136
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=95.23 E-value=0.057 Score=52.99 Aligned_cols=91 Identities=12% Similarity=0.144 Sum_probs=61.6
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEE---ecCCccchHHHHHHHH
Q 017814 157 AFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFN---LSGMGCSASVVAVDLV 233 (365)
Q Consensus 157 ~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~---l~~mGCsgg~~AL~lA 233 (365)
..+.......++++++|+++|++++|||.++... ..+..-..+.++||++++....+ .++|++++-..+|..+
T Consensus 233 ~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~----~~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~~ 308 (338)
T PRK09258 233 LLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQ----VGAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAMA 308 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCC----CCHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHHH
Confidence 3345566777889999999999999999998742 33345568899999986443333 5556666666666655
Q ss_pred HHHHHcccCCeEEEEEec
Q 017814 234 QQLFRTYKNKLAIVVSTE 251 (365)
Q Consensus 234 ~~ll~ag~~~~aLVV~~E 251 (365)
.+-=+..+.+++|+++..
T Consensus 309 ~~~g~~~~Gd~vll~~~G 326 (338)
T PRK09258 309 AEEGFLKPGDRVALLGIG 326 (338)
T ss_pred HHhCCCCCCCEEEEEEec
Confidence 432112356888888754
No 137
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=94.92 E-value=0.055 Score=52.87 Aligned_cols=88 Identities=8% Similarity=0.161 Sum_probs=58.6
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceE---EEecCCccchHHHHHHHHHH
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA---FNLSGMGCSASVVAVDLVQQ 235 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~---~~l~~mGCsgg~~AL~lA~~ 235 (365)
+.+.+...++++++|+++|++++|||.++.. ++.+..-..+.++||++++... -+.+++++++-..+|+.+..
T Consensus 223 ~~~~~~~~~~~~~~L~~~gl~~~did~~~~h----~~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~~~ 298 (326)
T PRK05963 223 TEAVRMMSGASQNVLASAAMTPQDIDRFFPH----QANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLANL 298 (326)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeC----CCCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHHHH
Confidence 4466677889999999999999999998874 2345566778999999875433 23334455555555544432
Q ss_pred HHHcccCCeEEEEEe
Q 017814 236 LFRTYKNKLAIVVST 250 (365)
Q Consensus 236 ll~ag~~~~aLVV~~ 250 (365)
-=+..+.+++|+++.
T Consensus 299 ~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 299 EQPLREGERLLFAAA 313 (326)
T ss_pred hCCCCCCCEEEEEEE
Confidence 111235678888775
No 138
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=94.75 E-value=0.066 Score=52.39 Aligned_cols=85 Identities=13% Similarity=0.174 Sum_probs=55.5
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEE---EecCCccchHHHHHHHHHH
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAF---NLSGMGCSASVVAVDLVQQ 235 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~---~l~~mGCsgg~~AL~lA~~ 235 (365)
+.+.....++++++|+++|++++|||.++... .....-..++++||++++.... +.++++|++-..+|..+
T Consensus 226 ~~~~~~~~~~i~~~L~~~gl~~~did~~~~H~----~~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~~-- 299 (329)
T PRK07204 226 KLSSKYLMKFIDKLLMDAGYTLADIDLIVPHQ----ASGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFEA-- 299 (329)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHHH--
Confidence 44556677899999999999999999999842 1223455789999998754332 33344444444455443
Q ss_pred HHHcc---cCCeEEEEEe
Q 017814 236 LFRTY---KNKLAIVVST 250 (365)
Q Consensus 236 ll~ag---~~~~aLVV~~ 250 (365)
++.+ +.+++|+++.
T Consensus 300 -~~~g~~~~Gd~vll~~~ 316 (329)
T PRK07204 300 -IKQKKVQRGNKILLLGT 316 (329)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 4333 4677777653
No 139
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=94.36 E-value=0.12 Score=50.26 Aligned_cols=88 Identities=14% Similarity=0.172 Sum_probs=57.6
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEE---ecCCccchHHHHHHHHHH
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFN---LSGMGCSASVVAVDLVQQ 235 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~---l~~mGCsgg~~AL~lA~~ 235 (365)
+...+...++++++|+++|++++|||.++... +.+..-..+++.||++++....+ .+++++++-..+|..+.+
T Consensus 215 ~~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~~~~ 290 (318)
T TIGR00747 215 KHAVRKMGDVVEETLEANGLDPEDIDWFVPHQ----ANLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDELLR 290 (318)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHHHHH
Confidence 34455567789999999999999999999742 34456677899999987422222 234455666666655443
Q ss_pred HHHcccCCeEEEEEe
Q 017814 236 LFRTYKNKLAIVVST 250 (365)
Q Consensus 236 ll~ag~~~~aLVV~~ 250 (365)
-=+..+.+++|+++.
T Consensus 291 ~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 291 TGRIKPGDLLLLVAF 305 (318)
T ss_pred cCCCCCCCEEEEEEE
Confidence 211234577777764
No 140
>PRK06840 hypothetical protein; Validated
Probab=94.15 E-value=0.13 Score=50.58 Aligned_cols=81 Identities=14% Similarity=0.282 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceE-E-EecCCccchHHHHHHHHHHHHHcc
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA-F-NLSGMGCSASVVAVDLVQQLFRTY 240 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~-~-~l~~mGCsgg~~AL~lA~~ll~ag 240 (365)
....++++++|+++|++++|||.++... ..+..-..++++||++++... . +.+++++++-..+|..+ ++.+
T Consensus 237 ~~~~~~i~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~~~---~~~~ 309 (339)
T PRK06840 237 PNFLKVIREALRKSGYTPKDIDYLAILH----MKRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLHLA---LEQG 309 (339)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECC----cCHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHHHH---HHcC
Confidence 4566899999999999999999987631 234445568999999863321 1 34455555555555544 3333
Q ss_pred ---cCCeEEEEEe
Q 017814 241 ---KNKLAIVVST 250 (365)
Q Consensus 241 ---~~~~aLVV~~ 250 (365)
+.+++|+++.
T Consensus 310 ~~~~Gd~ill~~~ 322 (339)
T PRK06840 310 KLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCEEEEEEE
Confidence 5677777764
No 141
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=94.08 E-value=0.12 Score=51.95 Aligned_cols=88 Identities=9% Similarity=0.131 Sum_probs=58.2
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceE---EEecCCccchHHHHHHHHHH
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA---FNLSGMGCSASVVAVDLVQQ 235 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~---~~l~~mGCsgg~~AL~lA~~ 235 (365)
+.+.....++++++|+++|++++|||+++... ..+.+-..++++||++++... -+.+++++++-..+|+.+..
T Consensus 276 ~~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~~~ 351 (379)
T PLN02326 276 KFAVRCVPQVIESALQKAGLTAESIDWLLLHQ----ANQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEAVR 351 (379)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHHHH
Confidence 34455566789999999999999999998742 233344568999999875432 24555666666666665533
Q ss_pred HHHcccCCeEEEEEe
Q 017814 236 LFRTYKNKLAIVVST 250 (365)
Q Consensus 236 ll~ag~~~~aLVV~~ 250 (365)
-=+..+.+++|+++.
T Consensus 352 ~g~~~~Gd~vll~~~ 366 (379)
T PLN02326 352 SGKVKKGDVIATAGF 366 (379)
T ss_pred cCCCCCCCEEEEEEE
Confidence 211235677777764
No 142
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=93.88 E-value=0.17 Score=48.95 Aligned_cols=78 Identities=14% Similarity=0.087 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeec-CCCCCCcHHHHHHHHcCCCC---CceEEEecCCccchHHHHHHHHHHHHH
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRN---DIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~ss-~~~~~Ps~a~~v~~~LGL~~---~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
+-..++++++|+++|++++|||.++...+ ......-.........+.++ ....-+++.+++++++..|..+...++
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~ 284 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLE 284 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHh
Confidence 44557999999999999999999998432 22222222223333344211 012235677788888888888877776
Q ss_pred cc
Q 017814 239 TY 240 (365)
Q Consensus 239 ag 240 (365)
.+
T Consensus 285 ~~ 286 (332)
T cd00825 285 HG 286 (332)
T ss_pred cC
Confidence 55
No 143
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.88 E-value=0.12 Score=50.06 Aligned_cols=87 Identities=11% Similarity=0.117 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEE---EecCCccchHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAF---NLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~---~l~~mGCsgg~~AL~lA~~l 236 (365)
...+...++++++|+++|++++|||.++... ..+..-..++++||++++.... +.++++|+.-+..|..+.+-
T Consensus 216 ~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~~~~~~ 291 (319)
T PRK09352 216 FAVRELAKVAREALEAAGLTPEDIDWLVPHQ----ANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALDEAVRD 291 (319)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHHHHHHc
Confidence 4445567899999999999999999999742 3445566789999998743322 23444555555555544321
Q ss_pred HHcccCCeEEEEEe
Q 017814 237 FRTYKNKLAIVVST 250 (365)
Q Consensus 237 l~ag~~~~aLVV~~ 250 (365)
=+..+.+++|+++.
T Consensus 292 g~~~~Gd~vll~s~ 305 (319)
T PRK09352 292 GRIKRGDLVLLEGF 305 (319)
T ss_pred CCCCCCCEEEEEEE
Confidence 11134677777764
No 144
>PRK04262 hypothetical protein; Provisional
Probab=93.66 E-value=0.13 Score=50.90 Aligned_cols=81 Identities=15% Similarity=0.229 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceE-----EEecCCccchHHHHHHHHHHHH
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA-----FNLSGMGCSASVVAVDLVQQLF 237 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~-----~~l~~mGCsgg~~AL~lA~~ll 237 (365)
....++++++|+++|++++|||.++.. ++.+.+-..++++||++++... -+.+++++++-..+|..+.+
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~H----q~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~~-- 282 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFH----QPNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVLD-- 282 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecC----CCchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHHH--
Confidence 456788999999999999999999874 2344566678899999864332 24566666666667766554
Q ss_pred HcccCCeEEEEE
Q 017814 238 RTYKNKLAIVVS 249 (365)
Q Consensus 238 ~ag~~~~aLVV~ 249 (365)
+..+.+++|+++
T Consensus 283 ~~~~Gd~vll~~ 294 (347)
T PRK04262 283 VAKPGDRILVVS 294 (347)
T ss_pred hCCCCCEEEEEe
Confidence 233556666555
No 145
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=93.56 E-value=0.12 Score=50.60 Aligned_cols=84 Identities=14% Similarity=0.145 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEE---EecCCccchHHHHHHHHHHHHHc
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAF---NLSGMGCSASVVAVDLVQQLFRT 239 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~---~l~~mGCsgg~~AL~lA~~ll~a 239 (365)
....++++++|+++|++++|||+++... ..+..-..++++||++++.... +.++++|++-..+|..+.+-=..
T Consensus 226 ~~~~~~i~~~L~~~g~~~~did~~~~hq----~~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~~~~g~~ 301 (326)
T CHL00203 226 FQVPAVIIKCLNALNISIDEVDWFILHQ----ANKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEAIQNNKI 301 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHHHHhCCC
Confidence 4566788999999999999999998842 2334556689999998644332 33455566666666555332112
Q ss_pred ccCCeEEEEEe
Q 017814 240 YKNKLAIVVST 250 (365)
Q Consensus 240 g~~~~aLVV~~ 250 (365)
.+.+++|+++.
T Consensus 302 ~~Gd~vll~~~ 312 (326)
T CHL00203 302 QPGQIIVLSGF 312 (326)
T ss_pred CCCCEEEEEEE
Confidence 35677777764
No 146
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=93.54 E-value=0.11 Score=50.17 Aligned_cols=88 Identities=13% Similarity=0.229 Sum_probs=58.4
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEE---ecCCccchHHHHHHHHHH
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFN---LSGMGCSASVVAVDLVQQ 235 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~---l~~mGCsgg~~AL~lA~~ 235 (365)
+...+...++++++|+++|++++|||.++... +.+..-..+.+++|++++..... .+++++++-..+|..+.+
T Consensus 219 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~~~ 294 (320)
T cd00830 219 KFAVRLMPESIEEALEKAGLTPDDIDWFVPHQ----ANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEAIE 294 (320)
T ss_pred HHHHHhhHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHHHH
Confidence 34556778899999999999999999998842 34455567899999976433222 234455555555555433
Q ss_pred HHHcccCCeEEEEEe
Q 017814 236 LFRTYKNKLAIVVST 250 (365)
Q Consensus 236 ll~ag~~~~aLVV~~ 250 (365)
-=+-.+.+++|+++.
T Consensus 295 ~~~~~~G~~vll~~~ 309 (320)
T cd00830 295 EGKLKKGDLVLLLGF 309 (320)
T ss_pred cCCCCCCCEEEEEEE
Confidence 211125788888775
No 147
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=93.26 E-value=0.33 Score=45.01 Aligned_cols=87 Identities=10% Similarity=0.076 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEe-ecCCCCCCcHHHHHHHHcCCC---CCceEEEecCCccchHHHHHHHHHHHHH
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLR---NDIKAFNLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~-ss~~~~~Ps~a~~v~~~LGL~---~~v~~~~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
+...++++++|+++|++++|||.++.. ..+...............+.+ .....-.+++++++++...+..+...++
T Consensus 145 ~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~ 224 (254)
T cd00327 145 EGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLE 224 (254)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHh
Confidence 456688999999999999999999874 222222222222222333332 1122335566677888888877776666
Q ss_pred cc-------cCCeEEEEE
Q 017814 239 TY-------KNKLAIVVS 249 (365)
Q Consensus 239 ag-------~~~~aLVV~ 249 (365)
.+ +.+++++.+
T Consensus 225 ~~~~~~~~~~~~~~l~~~ 242 (254)
T cd00327 225 HEFIPPTPREPRTVLLLG 242 (254)
T ss_pred CCCcCCCCCCcCEEEEee
Confidence 54 445555444
No 148
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.20 E-value=0.26 Score=47.90 Aligned_cols=84 Identities=6% Similarity=0.098 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceE---EEecCCccchHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA---FNLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~---~~l~~mGCsgg~~AL~lA~~l 236 (365)
.+.+...++++++|+++|++++|||.++... +.+..-..++++||++++... -+.++++|++-..+|..+
T Consensus 222 ~~~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~~~--- 294 (325)
T PRK12879 222 WAVRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALDLA--- 294 (325)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHHHH---
Confidence 3345566789999999999999999999842 345556688999999764332 234455566666666544
Q ss_pred HHcc---cCCeEEEEEe
Q 017814 237 FRTY---KNKLAIVVST 250 (365)
Q Consensus 237 l~ag---~~~~aLVV~~ 250 (365)
++.+ +.+++|+++.
T Consensus 295 ~~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 295 LEQGKIKPGDTLLLYGF 311 (325)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3433 4577777764
No 149
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=93.10 E-value=0.28 Score=50.40 Aligned_cols=91 Identities=15% Similarity=0.276 Sum_probs=59.4
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCC--------ccchHHHHHHHHHHHH
Q 017814 166 FDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGM--------GCSASVVAVDLVQQLF 237 (365)
Q Consensus 166 ~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~m--------GCsgg~~AL~lA~~ll 237 (365)
..|++++|+++|++++|||.+.++- ..........+++|++. ..++++|- |++|....+.+..++.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~e----aFa~~~l~~~~~lg~~~--~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINE----AFAVVAEKFIRDLDLDR--DKVNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEch----HHHHHHHHHHHHcCCCh--hhccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 4799999999999999999998752 22344556778899875 34566662 4556555566666665
Q ss_pred HcccCCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEee
Q 017814 238 RTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTN 283 (365)
Q Consensus 238 ~ag~~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~ 283 (365)
+.+ .++.| +..|..|-.++|+||++
T Consensus 392 ~~g-~~~Gl--------------------~~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 392 RRG-LKRGL--------------------VTMCAAGGMAPAIIIER 416 (417)
T ss_pred HhC-CCeEE--------------------EEEEeeccceeEEEEEe
Confidence 543 33332 22355566677777764
No 150
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.63 E-value=0.33 Score=48.57 Aligned_cols=86 Identities=9% Similarity=0.166 Sum_probs=56.1
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHH-cCCCCCc-e----EEEecCCccchHHHHHHH
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINR-YNLRNDI-K----AFNLSGMGCSASVVAVDL 232 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~-LGL~~~v-~----~~~l~~mGCsgg~~AL~l 232 (365)
+.+.+.+.++++++|+++|++++|||.++... ..+.+-..+.++ +|+.... . --..++++|++-..+|..
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq----~~~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQ----ANINMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 55677788999999999999999999999842 122223334556 5643211 1 124566677777777777
Q ss_pred HHHHHHcccCCeEEEEEe
Q 017814 233 VQQLFRTYKNKLAIVVST 250 (365)
Q Consensus 233 A~~ll~ag~~~~aLVV~~ 250 (365)
+...+ .+.+++|+++.
T Consensus 343 ~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDL--AAGDLGVICSF 358 (372)
T ss_pred HhccC--CCCCEEEEEEe
Confidence 64433 35677777764
No 151
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=92.40 E-value=0.14 Score=45.33 Aligned_cols=48 Identities=15% Similarity=0.076 Sum_probs=35.0
Q ss_pred eeeeeecCCCcchhhhcccccccCCCcceecHHHHHHHHHHHHHhHHhhcC
Q 017814 298 LVRTHFGSNDEAYECCMQVEDQQGHPGFRLTKQLTKAAALAFTMNLQVLVP 348 (365)
Q Consensus 298 ~vrt~~~~d~~~~~~~~~~~~~~G~~g~~Lsk~vp~~~~~~L~~~i~~L~p 348 (365)
...++..||++++ |.|...+.| +.+.|+|+||.++++++++.++.+..
T Consensus 4 ~~~~~~iP~te~~--m~~~i~~~G-f~~~Ls~~vP~~i~~~i~~~~~~~L~ 51 (151)
T PF02797_consen 4 STSSHLIPDTEDA--MGWDIGDTG-FHFILSKEVPDLISDNIPPFVEDLLA 51 (151)
T ss_dssp EEEEEE-TT-TTS--EEEEEETTE-EEEEE-TTHHHHHHHHHHHHHHHHHH
T ss_pred eccceEecCCcCc--eEEEEeCCe-EEEEEhhHhHHHHHHHHHHHHHHHHh
Confidence 3456778999863 666666666 56899999999999999999987744
No 152
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=92.06 E-value=0.28 Score=48.96 Aligned_cols=88 Identities=7% Similarity=0.034 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEe-ecCCCCCCcHHHHHHHHcCCC-CCc----eEEEecCCccchHHHHHHHHHHH
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLR-NDI----KAFNLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~-ss~~~~~Ps~a~~v~~~LGL~-~~v----~~~~l~~mGCsgg~~AL~lA~~l 236 (365)
+-..++++++|+++|++|+|||.|+.. +.+..........+.+-+|-. ... +.-.++..+.++|...+..+...
T Consensus 234 ~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~ 313 (348)
T PRK06147 234 DGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAA 313 (348)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHH
Confidence 345689999999999999999999873 222212222223333334421 111 22224444556666666666666
Q ss_pred HHcc--cCCeEEEEEe
Q 017814 237 FRTY--KNKLAIVVST 250 (365)
Q Consensus 237 l~ag--~~~~aLVV~~ 250 (365)
++.+ +..++||.++
T Consensus 314 ~~~g~~~g~~~L~~s~ 329 (348)
T PRK06147 314 SRKGYGPGPNVLCHLS 329 (348)
T ss_pred HHcCcCCCCcEEEEec
Confidence 6666 5678888876
No 153
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=91.61 E-value=2.8 Score=39.36 Aligned_cols=115 Identities=10% Similarity=-0.003 Sum_probs=74.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCC----------------CC---------cHHHHHHHHcCCCCCce
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSP----------------AP---------SLTSRIINRYNLRNDIK 214 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~----------------~P---------s~a~~v~~~LGL~~~v~ 214 (365)
....|+..++.+++++. .++|.+|+++..+.. .| ..+..+.-..|.+ .+
T Consensus 33 ~~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~~--~~ 106 (218)
T PF13723_consen 33 RLSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKNT--GP 106 (218)
T ss_pred HHHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCCC--Cc
Confidence 46788888888888653 567788886644311 23 1222333344543 46
Q ss_pred EEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCCCCCcCCCCcchhhhhhhccCCeEEEEEeeccc
Q 017814 215 AFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMGPNWYCGREKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 215 ~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S~~~~~~~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
...+.. |=.++..||..|..+++.+ .+.||||+.|-.....|.....+ .....-.|.|++|+++..
T Consensus 107 ~tal~a-~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~----~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 107 NTALAA-GEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPE----RDPPFPYALALVLSPGDS 172 (218)
T ss_pred eEEEec-CcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhcccc----cCCCcCEEEEEEecCCCC
Confidence 677777 7788999999999999999 99999999999875554432111 111122366777775543
No 154
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=90.22 E-value=0.67 Score=46.08 Aligned_cols=88 Identities=13% Similarity=0.129 Sum_probs=61.1
Q ss_pred hhHHHHHHHHHHHHHHhC--CCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCce------EEEecCCccchHHHHH
Q 017814 159 SEMDEIIFDTLDKLFART--DISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIK------AFNLSGMGCSASVVAV 230 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~a--gi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~------~~~l~~mGCsgg~~AL 230 (365)
+.+.+...++++++|+++ |++++|||.++... ..+..-..++++||++++.. --+.++|++++-..+|
T Consensus 255 ~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~----~~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L 330 (361)
T cd00831 255 RLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHP----GGRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVL 330 (361)
T ss_pred HHHHHHHHHHHHHHhccccCCCccccceEEEECC----CChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHH
Confidence 445566778899999999 99999999999842 22334456889999986421 2356677777777788
Q ss_pred HHHHHHHHcccCCeEEEEEe
Q 017814 231 DLVQQLFRTYKNKLAIVVST 250 (365)
Q Consensus 231 ~lA~~ll~ag~~~~aLVV~~ 250 (365)
..+.+-=+-.+.+++++++.
T Consensus 331 ~~~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 331 AYMEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHHhCCCCCCCEEEEEEE
Confidence 77654322235677777764
No 155
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=88.88 E-value=0.72 Score=46.80 Aligned_cols=67 Identities=12% Similarity=0.196 Sum_probs=42.9
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccc-----hHHHHHHHHHHHHH
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCS-----ASVVAVDLVQQLFR 238 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCs-----gg~~AL~lA~~ll~ 238 (365)
...|++++|+++|++|+|||.+-++- ..+.......+.||+.+ ..++++| |-. .|..+.++...++.
T Consensus 293 ~~~a~~~al~~agl~~~dId~~e~~d----~f~~~~~~~~e~lg~~~--~~vn~~G-g~~a~GHp~gAsG~~~~~~l~~ 364 (393)
T PRK05656 293 PVSATRRCLDKAGWSLAELDLIEANE----AFAAQSLAVGKELGWDA--AKVNVNG-GAIALGHPIGASGCRVLVTLLH 364 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecC----ccHHHHHHHHHHhCCCC--ccCCcCC-CHHHhCccHHHHHHHHHHHHHH
Confidence 35799999999999999999998742 23334445667888754 2344554 332 24455555555443
No 156
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=88.58 E-value=0.86 Score=46.55 Aligned_cols=65 Identities=17% Similarity=0.363 Sum_probs=43.7
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccch-----HHHHHHHHHHHH
Q 017814 166 FDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSA-----SVVAVDLVQQLF 237 (365)
Q Consensus 166 ~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsg-----g~~AL~lA~~ll 237 (365)
..|+++||+++|++++|||.+=++ ...+.......+.||+.+ ..++++| |..+ |..+++....++
T Consensus 303 ~~a~~~al~~AGl~~~DID~~ei~----daFa~~~l~~~e~lG~~~--~~vN~~G-G~la~GHP~GAsG~~~~~~l~ 372 (402)
T PRK08242 303 VPATRKALAKAGLTVDDIDLFELN----EAFASVVLRFMQALDIPH--DKVNVNG-GAIAMGHPLGATGAMILGTVL 372 (402)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEec----chhhHHHHHHHHHhCCCC--cCCCcCC-CHHhcCCcHHHHHHHHHHHHH
Confidence 469999999999999999998764 133444555678899865 3566666 5433 444444444433
No 157
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=88.20 E-value=0.14 Score=57.94 Aligned_cols=194 Identities=14% Similarity=0.156 Sum_probs=113.6
Q ss_pred CCCeEEEEEEEEcCCCCCCCcCHHHHHHHHhhcc-cCChhHHHHHHHHHHHhCcceEEeecCCCcCCC----CCCcchHH
Q 017814 82 GQCCYMLAYECYKPCDETRRLDTESCARVVWRNK-KLGLEEYRFLLKNMVSSGIGEETYGPRNVVEGR----EESPSLAE 156 (365)
Q Consensus 82 ~~~v~I~~~~~~~P~~~~~~v~~ee~~~~~~~~~-~~~~~~~~~~~ri~~~sGI~~R~~~~~~~~~~~----~~~~s~~~ 156 (365)
...+.|.|++--+|+.. .-++|.+.+-..- -.+++. .+|----.|+-+|+--..+....+ +-+|--++
T Consensus 10 ~edIvIsG~sgklPes~----nv~eF~~nLl~g~DmVtdd~---rrW~~G~ygLP~r~gKlKdL~kFDa~ff~vh~KQa~ 82 (2376)
T KOG1202|consen 10 QEDIVISGMSGKLPESD----NVKEFGDNLLAGVDMVTDDP---RRWEAGLYGLPKRSGKLKDLNKFDAGFFGVHPKQAN 82 (2376)
T ss_pred CCcEEEeccCCCCCCcc----cHHHHhhhhhcccccccCCc---ccccccccCCchhhcchhhhhhhcccccCcCccccc
Confidence 35788999999999886 4566665432110 011221 111111123333321111110000 00111222
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCCCCCccE----EEEeecC-C-----CCCC----------cHHHHHHHHcC----CCCC
Q 017814 157 AFSEMDEIIFDTLDKLFARTDISPSEIDV----LVVNVSL-F-----SPAP----------SLTSRIINRYN----LRND 212 (365)
Q Consensus 157 ~~e~a~~La~~A~~~aL~~agi~p~dID~----LIv~ss~-~-----~~~P----------s~a~~v~~~LG----L~~~ 212 (365)
..+.-..|..+|..+|+-++|++|.|... +.+.|+. . ...| -.-+|.+|++- +++
T Consensus 83 ~MDPq~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqG- 161 (2376)
T KOG1202|consen 83 TMDPQLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQG- 161 (2376)
T ss_pred ccCHHHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccC-
Confidence 33455678999999999999999987642 3332221 1 1112 23467777763 554
Q ss_pred ceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCC-----CCC-cCC------C----C-cchhhhhhhccCC
Q 017814 213 IKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMG-----PNW-YCG------R----E-KSMMLSNILFRSG 275 (365)
Q Consensus 213 v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S-----~~~-~~~------~----d-r~~lv~~~LFgDG 275 (365)
+++.+.. +|++.+.||..|.+-+++|.++.++|-|+...- +.| +.+ . | -.+ ..-=.||
T Consensus 162 -PS~s~Dt-acsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeagn---GY~Rseg 236 (2376)
T KOG1202|consen 162 -PSFSVDT-ACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAGN---GYCRSEG 236 (2376)
T ss_pred -Cchhhhh-hhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccCC---ceeecCc
Confidence 7888888 999999999999999999999999999987642 222 001 0 1 112 3445799
Q ss_pred eEEEEEeeccccc
Q 017814 276 GCSMLLTNNRALK 288 (365)
Q Consensus 276 AAAvlLs~~~~~~ 288 (365)
++|++|.++...+
T Consensus 237 ~~avllqrk~~Ar 249 (2376)
T KOG1202|consen 237 VVAVLLQRKSLAR 249 (2376)
T ss_pred eEEEEEehhHHHH
Confidence 9999999877654
No 158
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=87.07 E-value=1.8 Score=41.79 Aligned_cols=90 Identities=12% Similarity=0.192 Sum_probs=59.6
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCC-cHHHHHHHHcCCCCC-ce------EEEecCCccchHHH
Q 017814 157 AFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAP-SLTSRIINRYNLRND-IK------AFNLSGMGCSASVV 228 (365)
Q Consensus 157 ~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~P-s~a~~v~~~LGL~~~-v~------~~~l~~mGCsgg~~ 228 (365)
..+.+.+...++++++|++.|++ +|||.++... ... ..-..+.+++++++. +. .-+.++++|++-..
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~ 291 (324)
T cd00827 217 VFEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQ----PNGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILL 291 (324)
T ss_pred hHHHHhHHHHHHHHHHHHHcccc-cccceeeccC----chHHHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHH
Confidence 34566788889999999999999 9999888742 222 556778899997521 11 23455666666666
Q ss_pred HHHHHHHHHHcccCCeEEEEEec
Q 017814 229 AVDLVQQLFRTYKNKLAIVVSTE 251 (365)
Q Consensus 229 AL~lA~~ll~ag~~~~aLVV~~E 251 (365)
+|..+..--+-.+.+++++++.-
T Consensus 292 ~L~~~~~~~~~~~Gd~vl~~~~G 314 (324)
T cd00827 292 GLASLLESGKLKAGDRVLLFSYG 314 (324)
T ss_pred HHHHHHhcCCCCCCCEEEEEEec
Confidence 66655432222346788887754
No 159
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=86.81 E-value=1.2 Score=44.47 Aligned_cols=70 Identities=10% Similarity=0.133 Sum_probs=48.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceE-E--E-ecCCccchHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA-F--N-LSGMGCSASVVAVDLV 233 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~-~--~-l~~mGCsgg~~AL~lA 233 (365)
.+.....++++++|+++|++++|||.+++.. +.+..-..+.++||++++... . + .++|+.++-..+|+.+
T Consensus 239 ~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ----~~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~ 312 (353)
T PRK12880 239 MALECEPKSFKEILEFSKVDEKDIAFHLFHQ----SNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCEL 312 (353)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHH
Confidence 4556667789999999999999999999852 344566789999999874432 1 2 3344545555555533
No 160
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=86.63 E-value=1.1 Score=44.50 Aligned_cols=88 Identities=15% Similarity=0.260 Sum_probs=56.9
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEe--cCCccchH--HHHHHH
Q 017814 157 AFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNL--SGMGCSAS--VVAVDL 232 (365)
Q Consensus 157 ~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l--~~mGCsgg--~~AL~l 232 (365)
-.+.+...+.++++++|+++|++++|||.+|.. +.-..+-..++++||++++....++ .| ..++. ..+|..
T Consensus 217 vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpH----Qan~ri~~~i~~~l~~~~~k~~~~~~~yG-NtsaAsiplaL~~ 291 (323)
T COG0332 217 VFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPH----QANLRIIEAIAKKLGIPEEKVVVTVDKYG-NTSAASIPLALDE 291 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEccc----cccHHHHHHHHHHcCCCHHHHhhHHHHhc-ccccchHHHHHHH
Confidence 456788899999999999999999999999874 2344566778999999765444443 33 33333 334443
Q ss_pred HHHHHHcccCCeEEEEE
Q 017814 233 VQQLFRTYKNKLAIVVS 249 (365)
Q Consensus 233 A~~ll~ag~~~~aLVV~ 249 (365)
+..-=+-.+.+.+|+++
T Consensus 292 ~~~~g~ik~Gd~ill~~ 308 (323)
T COG0332 292 ALREGRIKPGDLVLLEA 308 (323)
T ss_pred HhhhCCCCCCCEEEEEe
Confidence 32221222345666544
No 161
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=86.31 E-value=2.1 Score=42.76 Aligned_cols=87 Identities=14% Similarity=0.060 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCc--HHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPS--LTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps--~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll 237 (365)
.-.+-....++++|+++|++.+|||+|-++..++ ..|+ .....++.|-+.-+++-+.++. +.|=-.+..+-
T Consensus 49 ~H~e~i~~li~~al~eA~~~~~dID~IA~T~gPG-L~gaL~VG~~~Ak~LA~a~~kPli~VnH------~~gHi~a~~l~ 121 (342)
T COG0533 49 HHVENIPPLIEEALAEAGVSLEDIDAIAVTAGPG-LGGALLVGATAAKALALALNKPLIPVNH------LEGHIEAARLE 121 (342)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCEEEEecCCC-chhHHHHHHHHHHHHHHHhCCCEeecch------HHHHHHHHHhc
Confidence 3345566788999999999999999999987665 2332 3455666666666678888888 33322233332
Q ss_pred Hc-ccCCeEEEEEeccC
Q 017814 238 RT-YKNKLAIVVSTESM 253 (365)
Q Consensus 238 ~a-g~~~~aLVV~~E~~ 253 (365)
.. ...-.+|+|++-..
T Consensus 122 ~~~~~p~v~LlVSGGHT 138 (342)
T COG0533 122 TGLAFPPVALLVSGGHT 138 (342)
T ss_pred cCCCCCcEEEEEecCce
Confidence 22 22345677765443
No 162
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=86.22 E-value=2.3 Score=40.51 Aligned_cols=117 Identities=15% Similarity=0.216 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCc-HHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHccc
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPS-LTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYK 241 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps-~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~ 241 (365)
+....-++++|++++++++|||.+.++-.++...|- ..+.+++.+-+-.+.+-..++. |-|- +.+.+. +....
T Consensus 51 ~~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~kPlv~VNH--CigH---IEMGR~-iTgA~ 124 (336)
T KOG2708|consen 51 AWILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNKPLVGVNH--CIGH---IEMGRE-ITGAQ 124 (336)
T ss_pred HHHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCCCcccchh--hhhh---hhhcce-eccCC
Confidence 445556788899999999999999998777777774 4456666666555667666665 4432 233222 22223
Q ss_pred CCeEEEEEeccCCCCCc-------CCCCcchhhhhhhccCCeEEEEEeeccc
Q 017814 242 NKLAIVVSTESMGPNWY-------CGREKSMMLSNILFRSGGCSMLLTNNRA 286 (365)
Q Consensus 242 ~~~aLVV~~E~~S~~~~-------~~~dr~~lv~~~LFgDGAAAvlLs~~~~ 286 (365)
+-.||-|++-+.-.--| ++...+-.++|||=+= |-.+=|+|+|+
T Consensus 125 nPvvLYvSGGNTQvIAYse~rYrIFGETlDIAvGNClDRF-AR~lklsN~Ps 175 (336)
T KOG2708|consen 125 NPVVLYVSGGNTQVIAYSEKRYRIFGETLDIAVGNCLDRF-ARVLKLSNDPS 175 (336)
T ss_pred CCEEEEEeCCceEEEEEccceeeeecceehhhhhhhHHHH-HHHhcCCCCCC
Confidence 56777777655331111 1333344455665222 12344667665
No 163
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=85.73 E-value=3.4 Score=41.89 Aligned_cols=85 Identities=8% Similarity=0.171 Sum_probs=63.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCC-----CCceEE-EecCCccchHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLR-----NDIKAF-NLSGMGCSASVVAVDLV 233 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~-----~~v~~~-~l~~mGCsgg~~AL~lA 233 (365)
.-..-...|+++.+++.|..|+|.|.+++. .|.|.+....+..+|.+ +..... .++++.|++...+|...
T Consensus 206 ~Y~~~~~~a~~~~~~k~gls~~dfdy~vfH----~P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~ 281 (377)
T COG3425 206 AYFKHVENAAKGYMEKTGLSPDDFDYIVFH----QPNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASL 281 (377)
T ss_pred HHHHHHHHHHHHHHHHhCCChhhhCeEEec----CCCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHH
Confidence 345667789999999999999999999985 26777888888888876 433333 58888999888776554
Q ss_pred HHHHHcccCCeEEEEE
Q 017814 234 QQLFRTYKNKLAIVVS 249 (365)
Q Consensus 234 ~~ll~ag~~~~aLVV~ 249 (365)
-+... .+.+++|+++
T Consensus 282 L~~a~-~~G~rIl~~S 296 (377)
T COG3425 282 LDNAK-LPGDRILLFS 296 (377)
T ss_pred HhhcC-CCCCEEEEEe
Confidence 44333 2678888775
No 164
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=85.22 E-value=1.8 Score=44.13 Aligned_cols=52 Identities=25% Similarity=0.356 Sum_probs=37.9
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCc
Q 017814 166 FDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMG 222 (365)
Q Consensus 166 ~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mG 222 (365)
..|++++|+++|++|+|||.+-++ ...........+.||+.++...++.+| |
T Consensus 299 ~~A~~~al~~AGl~~~DID~iei~----dafa~~~l~~~e~lg~~~~~~pvN~~G-G 350 (400)
T PRK13359 299 APATQKLLARLGMTLDQFDVIELN----EAFASQGLAVLRELGLADDDARVNPNG-G 350 (400)
T ss_pred HHHHHHHHHHhCCCHHHcCcCccC----cHhHHHHHHHHHHcCCCCCCCCEECCC-c
Confidence 679999999999999999998753 123334455668899854345677777 5
No 165
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=84.95 E-value=1.6 Score=44.20 Aligned_cols=50 Identities=18% Similarity=0.269 Sum_probs=37.9
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG 220 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~ 220 (365)
...|+++||+++|++|+|||.+=+.- ..+.......+.||+.+ ..++.+|
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~--~~vN~~G 343 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDP--ETVNIKG 343 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCc--cccCCCC
Confidence 46799999999999999999987742 34455666778999875 3466665
No 166
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=84.80 E-value=2.4 Score=44.49 Aligned_cols=80 Identities=16% Similarity=0.199 Sum_probs=52.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCC-ceEEEecCCccc--------hHHHHHHHHHH
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRND-IKAFNLSGMGCS--------ASVVAVDLVQQ 235 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~-v~~~~l~~mGCs--------gg~~AL~lA~~ 235 (365)
...|+++|++++|++++|||++=+.. ..|....+..+.||+.++ -.-.+++| |.- .|+..+..+..
T Consensus 294 ~~~aa~~a~~~AGi~~~Did~~elyd----cF~~~~~~~~E~LGl~~~g~~pvN~sG-Gl~s~G~P~~a~g~~~i~E~v~ 368 (498)
T PRK08257 294 IRAAGRRALALAGLGIDDIDAFDLYS----CFPSAVQVAARELGLDLDDPRPLTVTG-GLPFFGGPGNNYVTHAIAEMVE 368 (498)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEecc----CCHHHHHHHHHHcCcCCCCCCCcCCCc-ChhhcCCchhhHHHHHHHHHHH
Confidence 34699999999999999999997632 245555667789998764 12455555 432 24555555555
Q ss_pred HHHcccCCeEEEEE
Q 017814 236 LFRTYKNKLAIVVS 249 (365)
Q Consensus 236 ll~ag~~~~aLVV~ 249 (365)
.|+..+.+++|+.+
T Consensus 369 QLRg~~~~~gLv~~ 382 (498)
T PRK08257 369 RLRANPGRRGLVTA 382 (498)
T ss_pred HHhhcCCCEEEEEC
Confidence 56554455555543
No 167
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=84.32 E-value=1.5 Score=37.45 Aligned_cols=74 Identities=23% Similarity=0.414 Sum_probs=45.1
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CccchHHHHHHHHHHHH
Q 017814 166 FDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQLF 237 (365)
Q Consensus 166 ~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~--------mGCsgg~~AL~lA~~ll 237 (365)
..|++++|+++|++++|||.+=++- ......-...+.+|+.+ ..+|.+| .||+|....+++++++-
T Consensus 25 ~~A~~~al~~ag~~~~did~~Ei~E----aFA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L~ 98 (123)
T PF02803_consen 25 VPAARKALERAGLTPDDIDVIEINE----AFAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQLR 98 (123)
T ss_dssp HHHHHHHHHHHT--GGGESEEEE------SBHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCccccchhhccc----hhhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHHH
Confidence 5799999999999999999987752 23344556778889876 4566666 14455555555555554
Q ss_pred HcccCCeEE
Q 017814 238 RTYKNKLAI 246 (365)
Q Consensus 238 ~ag~~~~aL 246 (365)
+. ..++.+
T Consensus 99 ~~-~~~~gl 106 (123)
T PF02803_consen 99 RR-GGRYGL 106 (123)
T ss_dssp HH-TTSEEE
T ss_pred Hh-chhhhh
Confidence 43 234443
No 168
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=84.13 E-value=2.3 Score=43.33 Aligned_cols=52 Identities=23% Similarity=0.348 Sum_probs=38.2
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCc
Q 017814 166 FDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMG 222 (365)
Q Consensus 166 ~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mG 222 (365)
..|++++|+++|++|+|||.+-++ ...+.......+.||+.++-..++.+| |
T Consensus 300 ~~a~~~al~~Agl~~~DId~~ei~----D~f~~~~l~~~e~lg~~~~~~pvN~~G-G 351 (401)
T PRK09050 300 APATRKLLARLGLTIDQFDVIELN----EAFAAQGLAVLRQLGLADDDARVNPNG-G 351 (401)
T ss_pred HHHHHHHHHHcCCCHHHCCccccC----cHhHHHHHHHHHHcCCCCCCCCEeCCC-c
Confidence 579999999999999999998753 123444455678899865445667777 5
No 169
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=84.08 E-value=1.3 Score=45.01 Aligned_cols=52 Identities=21% Similarity=0.399 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCcc
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGC 223 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGC 223 (365)
...|+++||+++|++|+|||.+=++- ........-.+.||+.+ ..++++| |.
T Consensus 297 ~~~a~~~al~~agl~~~Did~~ei~d----~fa~~~l~~~e~lg~~~--~~vN~~G-G~ 348 (397)
T PRK06954 297 PVGAIRKLFEKNGWRAAEVDLFEINE----AFAVVTMAAMKEHGLPH--EKVNVNG-GA 348 (397)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEehhh----HHHHHHHHHHHHhCCCc--ccCCcCC-Ch
Confidence 35799999999999999999985431 11222233347788765 3556666 44
No 170
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=84.02 E-value=2.7 Score=42.31 Aligned_cols=69 Identities=19% Similarity=0.261 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CccchHHHHHHHHHH
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQ 235 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~--------mGCsgg~~AL~lA~~ 235 (365)
-...|++++|+++|++|+|||.+..+- ..........+.+|+.+ ..++.+| .|++|......+..+
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~e----afa~~~~~~~e~lgl~~--~~vn~~GG~la~Ghp~GatG~~~~~~~~~q 332 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEINE----AFASKVVACAKELQIPY--EKLNVNGGAIALGHPYGASGAMLVTRLFYQ 332 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeecc----hhHHHHHHHHHhcCCCc--hhcccCCcHHhccCchhhhHHHHHHHHHHH
Confidence 456799999999999999999998741 33344555678899865 3445542 255555555555555
Q ss_pred HHH
Q 017814 236 LFR 238 (365)
Q Consensus 236 ll~ 238 (365)
+-+
T Consensus 333 l~~ 335 (361)
T PRK06690 333 AKR 335 (361)
T ss_pred HHH
Confidence 543
No 171
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=83.73 E-value=1.4 Score=44.74 Aligned_cols=51 Identities=18% Similarity=0.281 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG 220 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~ 220 (365)
-...|+++||+++|++|+|||.+-++ ...+...-...+.||+.+ ..++.+|
T Consensus 290 ~~~~a~~~al~~agl~~~did~~ei~----d~f~~~~l~~~e~lg~~~--~~vN~~G 340 (391)
T PRK07661 290 GPIAAIPKALKLAGLELSDIGLFELN----EAFASQSIQVIRELGLDE--EKVNVNG 340 (391)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEeC----CHHHHHHHHHHHHcCCCC--CCCCCCC
Confidence 44679999999999999999999864 123333444456888754 2344444
No 172
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=83.64 E-value=4 Score=40.55 Aligned_cols=46 Identities=11% Similarity=0.093 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCC
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRND 212 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~ 212 (365)
.-...|+++||+++|++++|||.+=+.. ..+.......+.||+.+.
T Consensus 251 ~~~~~a~~~al~~Agl~~~did~~ei~d----~F~~~~l~~~e~lGl~~~ 296 (375)
T cd00829 251 DAARLAARRAYKMAGITPDDIDVAELYD----CFTIAELLALEDLGFCEK 296 (375)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecC----cChHHHHHHHHHcCCCCC
Confidence 3445799999999999999999987742 344556667788888763
No 173
>PLN03169 chalcone synthase family protein; Provisional
Probab=83.30 E-value=3.3 Score=41.99 Aligned_cols=89 Identities=10% Similarity=0.230 Sum_probs=57.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceE------EEecCCccchHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA------FNLSGMGCSASVVAVDLV 233 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~------~~l~~mGCsgg~~AL~lA 233 (365)
.+..-..++++++|+++|++++|||.+.+..-+ ....+-..++++||++++... -+.++|++++-..+|+.+
T Consensus 278 ~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq--~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~ 355 (391)
T PLN03169 278 KIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHP--GGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYM 355 (391)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCcceEEecC--CCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHH
Confidence 345555667899999999999999943322111 234566678899999875432 266777777777788766
Q ss_pred HHH--HH-cccCCeEEEEEe
Q 017814 234 QQL--FR-TYKNKLAIVVST 250 (365)
Q Consensus 234 ~~l--l~-ag~~~~aLVV~~ 250 (365)
..- ++ ..+.+++|+++.
T Consensus 356 ~~~~~~~~~~~gd~~ll~af 375 (391)
T PLN03169 356 REELKKKGEEDEEWGLILAF 375 (391)
T ss_pred HHhhcccCCCCCcEEEEEEE
Confidence 432 11 123567766653
No 174
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=83.03 E-value=3.3 Score=41.89 Aligned_cols=68 Identities=22% Similarity=0.306 Sum_probs=46.7
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC--------CccchHHHHHHHHHHH
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG--------MGCSASVVAVDLVQQL 236 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~--------mGCsgg~~AL~lA~~l 236 (365)
...|++++++++|++|+|||.+=++- ......-.-.+.||+.++ .+|.+| .||+|....+.++.++
T Consensus 287 ~~~A~~~al~~Agl~~~DiDv~Ei~d----aFa~~~l~~le~lgl~g~--~vN~~GG~la~GHP~GatG~~~~~~l~~qL 360 (388)
T PRK06366 287 PIPATRKLLEKQNKSIDYYDLVEHNE----AFSIASIIVRDQLKIDNE--RFNVNGGAVAIGHPIGNSGSRIIVTLINAL 360 (388)
T ss_pred HHHHHHHHHHHcCCCHHHcceeeccc----hhHHHHHHHHHHhCCCCC--ccCCCCchhhhCCCcCCCHHHHHHHHHHHH
Confidence 46899999999999999999987741 233445566688898774 677776 2344444555555555
Q ss_pred HH
Q 017814 237 FR 238 (365)
Q Consensus 237 l~ 238 (365)
-+
T Consensus 361 ~~ 362 (388)
T PRK06366 361 KT 362 (388)
T ss_pred Hh
Confidence 44
No 175
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=82.99 E-value=3.7 Score=41.62 Aligned_cols=51 Identities=16% Similarity=0.193 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG 220 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~ 220 (365)
-...|+++|++++|++|+|||.+=++- ..+...-...+.+|+..+ .++.+|
T Consensus 286 ~~~~a~~~al~~agl~~~did~~ei~d----~F~~~~l~~~e~lg~~~~--pvN~~G 336 (387)
T PRK07850 286 GPVQATAKVLEKAGMKIGDIDLVEINE----AFASVVLSWAQVHEPDMD--KVNVNG 336 (387)
T ss_pred hHHHHHHHHHHHcCCCHHHcCeeeecc----cchHHHHHHHHHcCCCCC--CcCCCC
Confidence 346899999999999999999998742 233334445578887653 566666
No 176
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=82.96 E-value=0.22 Score=41.66 Aligned_cols=77 Identities=9% Similarity=0.123 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe-ecCCCCCCcHHHHHHHHcCCC---CCceEEE----ecCCccchHHHHHHHHHH
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLR---NDIKAFN----LSGMGCSASVVAVDLVQQ 235 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~-ss~~~~~Ps~a~~v~~~LGL~---~~v~~~~----l~~mGCsgg~~AL~lA~~ 235 (365)
-..++++++|+++|++|+|||.|... +.+....+.-..-+.+-++-. ..++... ++....++|+..|-.+..
T Consensus 26 ~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l 105 (119)
T PF02801_consen 26 ALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALL 105 (119)
T ss_dssp HHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHH
Confidence 34678999999999999999999873 222111222223344444422 1133332 334466777888877777
Q ss_pred HHHcc
Q 017814 236 LFRTY 240 (365)
Q Consensus 236 ll~ag 240 (365)
.++.+
T Consensus 106 ~l~~~ 110 (119)
T PF02801_consen 106 ALEHG 110 (119)
T ss_dssp HHHHT
T ss_pred HHhcC
Confidence 77654
No 177
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=82.76 E-value=2 Score=43.79 Aligned_cols=51 Identities=12% Similarity=0.209 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG 220 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~ 220 (365)
-...|+++||+++|++|+|||++=++ ...........+.||+.+ ..++.+|
T Consensus 298 ~~~~A~~~al~~Agi~~~did~~ei~----D~f~~~~l~~~e~lg~~~--~~vN~~G 348 (399)
T PRK09052 298 GPIEAIPAALKQAGLKQDDLDWIELN----EAFAAQSLAVIRDLGLDP--SKVNPLG 348 (399)
T ss_pred hHHHHHHHHHHHcCCCHHHcCEEEeC----cHHHHHHHHHHHHhCCCC--cccCCCC
Confidence 44689999999999999999998753 122333445567888764 2344444
No 178
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=81.55 E-value=4.1 Score=41.56 Aligned_cols=75 Identities=5% Similarity=-0.052 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe-ecCCCCCCcHHHHHHHHcCCCCC-ceEEEecCCccchHHHHHHHHHHHHHcc
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLRND-IKAFNLSGMGCSASVVAVDLVQQLFRTY 240 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~-ss~~~~~Ps~a~~v~~~LGL~~~-v~~~~l~~mGCsgg~~AL~lA~~ll~ag 240 (365)
-..+|+++||+++|+ |+|||+|... +++......=...+.+-++.+-+ ++. .++....++|+..+-.+...++.+
T Consensus 281 ~~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~pvsS~Ks-~~GH~l~AAGa~e~i~~~lal~~g 357 (398)
T PRK06519 281 DLEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAGPVRGIGT-LFGHTMEAQFPLGLALAALSVSKG 357 (398)
T ss_pred HHHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCCCccccch-hhccchHHHHHHHHHHHHHHHhcC
Confidence 356899999999999 8999998763 33322233334445566663321 222 233324445555555555555554
No 179
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=81.51 E-value=3.2 Score=41.93 Aligned_cols=50 Identities=20% Similarity=0.293 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG 220 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~ 220 (365)
...|+++|++++|++|+|||.+-+.- ..+....+..+.||+.. ..++.+|
T Consensus 288 ~~~a~~~a~~~Agi~~~did~~e~~d----~fa~~~~~~~e~lG~~~--~pvn~~G 337 (386)
T TIGR01930 288 PVPAIPKALKKAGLSISDIDLFEINE----AFAAQVLACIKELGLDL--EKVNVNG 337 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCCeeehcc----hhHHHHHHHHHHhCCCh--hhcCCCC
Confidence 35899999999999999999986531 12233334457888743 2345555
No 180
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=81.20 E-value=3.8 Score=41.68 Aligned_cols=55 Identities=16% Similarity=0.320 Sum_probs=37.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCC-ceEEEecCCccc
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRND-IKAFNLSGMGCS 224 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~-v~~~~l~~mGCs 224 (365)
...|+++||+++|++|+|||.+=++- ..+...-...+.||+.++ ...++.+| |..
T Consensus 300 ~~~a~~~al~~Agl~~~Did~~ei~d----~f~~~~l~~~e~lg~~~~~~~~vN~~G-G~l 355 (404)
T PRK06205 300 PVPATEKALARAGLTLDDIDLIELNE----AFAAQVLAVLKEWGFGADDEERLNVNG-SGI 355 (404)
T ss_pred HHHHHHHHHHHcCCCHHHCCEeeecc----HHHHHHHHHHHHhCcCcccCCCcCCCC-CHH
Confidence 46799999999999999999987641 233344455677887541 01356666 543
No 181
>PLN02287 3-ketoacyl-CoA thiolase
Probab=81.18 E-value=3 Score=43.27 Aligned_cols=50 Identities=14% Similarity=0.183 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG 220 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~ 220 (365)
...|+++||+++|++|+|||.+=++ ...........+.||+.+ ..++++|
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~----daFa~~~l~~~e~lG~~~--~pvN~sG 382 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEIN----EAFASQFVYCCKKLGLDP--EKVNVNG 382 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec----chHHHHHHHHHHHcCCCc--cccCCCC
Confidence 4679999999999999999998653 122222333457888764 3455544
No 182
>PRK09051 beta-ketothiolase; Provisional
Probab=81.16 E-value=4.4 Score=41.18 Aligned_cols=67 Identities=12% Similarity=0.176 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccc-----hHHHHHHHHHHHHH
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCS-----ASVVAVDLVQQLFR 238 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCs-----gg~~AL~lA~~ll~ 238 (365)
...|+++||+++|++|+|||++=++- ..+.......+.||+.+ ..++.+| |.- .|..++.....++.
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~d----~f~~~~~~~~e~lg~~~--~~vN~~G-G~~a~Ghp~gAsG~~~~~~~~~ 365 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEANE----AFAAQACAVTRELGLDP--AKVNPNG-SGISLGHPVGATGAIITVKALY 365 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----ccHHHHHHHHHHhCCCc--cccCCCc-cHHHhcchHHHHHHHHHHHHHH
Confidence 46799999999999999999997741 23344555668899865 4566666 532 24444444444443
No 183
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=80.94 E-value=3 Score=42.26 Aligned_cols=69 Identities=22% Similarity=0.294 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCC-ceEEEecCCccch-----HHHHHHHHHHHHH
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRND-IKAFNLSGMGCSA-----SVVAVDLVQQLFR 238 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~-v~~~~l~~mGCsg-----g~~AL~lA~~ll~ 238 (365)
...|++++++++|++|+|||.+=++- ..+...-...+.||+-+. -..++.+| |.-+ |.+++++...+++
T Consensus 284 ~~~a~~~al~~Agl~~~DId~~El~d----~F~~~~l~~~e~lg~~~~~~~~vN~~G-G~la~GhP~GAtG~~~v~~l~~ 358 (387)
T PRK08947 284 PVPATQKALKRAGLSISDIDVFELNE----AFAAQSLPCLKDLGLLDKMDEKVNLNG-GAIALGHPLGCSGARISTTLLN 358 (387)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecc----cchHHHHHHHHHcCCCCCCCCCcCCCC-chhhcCCCccccHHHHHHHHHH
Confidence 46788999999999999999997641 334445556688887431 13455555 4322 4444444444443
No 184
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=80.77 E-value=5.2 Score=39.17 Aligned_cols=60 Identities=15% Similarity=0.151 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCC-cHHHHHHHHcCCCCCceEEEecC
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAP-SLTSRIINRYNLRNDIKAFNLSG 220 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~P-s~a~~v~~~LGL~~~v~~~~l~~ 220 (365)
-.+.....++++|+++|++++|||.+.++..++..+. ..+...++.|...-+++...++.
T Consensus 48 H~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~tglrvg~~~Ak~la~~~~~p~~~v~h 108 (305)
T TIGR00329 48 HAENIPPLLERALIESNVDKSEIDLIAYTQGPGLGGSLRVGATFARSLALSLDKPLIGVNH 108 (305)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCchhhHHHHHHHHHHHHHHhCCCEeeccc
Confidence 3466677889999999999999999999877764333 12233444444333456666666
No 185
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=80.73 E-value=5.1 Score=37.53 Aligned_cols=59 Identities=17% Similarity=0.208 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCC-cHHHHHHHHcCCCCCceEEEecC
Q 017814 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAP-SLTSRIINRYNLRNDIKAFNLSG 220 (365)
Q Consensus 162 ~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~P-s~a~~v~~~LGL~~~v~~~~l~~ 220 (365)
.+.....++++|.++|++++|+|.++|++.++..+. -.+.-+++-|.+..+++.+.++.
T Consensus 38 se~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvss 97 (220)
T COG1214 38 AERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVSS 97 (220)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeCH
Confidence 367778899999999999999999999887764443 34555666666666677777766
No 186
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=80.70 E-value=2.9 Score=42.12 Aligned_cols=90 Identities=10% Similarity=0.068 Sum_probs=51.8
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeec-CCCCCCcHHHHHHHHcCCCCC-----------ceEEEecCCccchH
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVS-LFSPAPSLTSRIINRYNLRND-----------IKAFNLSGMGCSAS 226 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss-~~~~~Ps~a~~v~~~LGL~~~-----------v~~~~l~~mGCsgg 226 (365)
+...+...+++++.|+++|++++|||.+++... ......+. ..+.++++.+.+ ...-.++++++++-
T Consensus 201 ~~y~~~~~~~~~~~l~~~g~~~~did~~i~H~p~~~~~~k~~-~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~ 279 (379)
T TIGR01835 201 EQYLNAFENAWNDYAKRTGLSLADFAAFCFHVPFTKMGLKAL-RHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSL 279 (379)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHcCEEEECCCCCcHHHHHH-HHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHH
Confidence 345566778899999999999999999998431 11111112 234466665421 01225666677776
Q ss_pred HHHHHHHHHHH-HcccCCeEEEEE
Q 017814 227 VVAVDLVQQLF-RTYKNKLAIVVS 249 (365)
Q Consensus 227 ~~AL~lA~~ll-~ag~~~~aLVV~ 249 (365)
..+|..+.+-- +..+.+++++++
T Consensus 280 ~l~L~~~l~~~~~~~~Gd~ill~s 303 (379)
T TIGR01835 280 YLGLASLLENAFEDTTGDKIGLFS 303 (379)
T ss_pred HHHHHHHHHhcccCCCCCEEEEEE
Confidence 66666553311 112456666554
No 187
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=79.14 E-value=3.9 Score=41.73 Aligned_cols=52 Identities=23% Similarity=0.333 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG 220 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~ 220 (365)
...|+++||+++|++|+|||++-++ ...+.......+.||+.++-..++.+|
T Consensus 298 ~~~a~~~al~~Agl~~~DID~~ei~----D~f~~~~l~~~e~lG~~~~~~pvN~~G 349 (400)
T TIGR02430 298 PVPATQKLLARAGLSIDQFDVIELN----EAFAAQALAVLRELGLADDDARVNPNG 349 (400)
T ss_pred HHHHHHHHHHHhCCCHHHCCCcccC----cHHHHHHHHHHHHcCCCCCCCeECCCC
Confidence 3578999999999999999998753 133344556678899854345566666
No 188
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=79.01 E-value=3.1 Score=41.62 Aligned_cols=78 Identities=14% Similarity=0.078 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEe-ecCCCCCCcHHHHHHHHcCCC-CCceE----EEecCCccchHHHHHHHHHHH
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLR-NDIKA----FNLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~-ss~~~~~Ps~a~~v~~~LGL~-~~v~~----~~l~~mGCsgg~~AL~lA~~l 236 (365)
.-..++++++|+++|++++|||.+... +.+....+.-...+.+-++-+ ..++. -.++...+++|+..+-.+...
T Consensus 275 ~~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~ 354 (406)
T cd00834 275 EGAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLA 354 (406)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHH
Confidence 345678999999999999999999873 333233333333455545532 11221 123344677788888888777
Q ss_pred HHcc
Q 017814 237 FRTY 240 (365)
Q Consensus 237 l~ag 240 (365)
++.+
T Consensus 355 l~~~ 358 (406)
T cd00834 355 LRDG 358 (406)
T ss_pred HhcC
Confidence 8765
No 189
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=78.93 E-value=3.2 Score=41.71 Aligned_cols=78 Identities=12% Similarity=0.033 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEE-eecCCCCCCcHHHHHHHHcCCC-CCceEE----EecCCccchHHHHHHHHHHH
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVV-NVSLFSPAPSLTSRIINRYNLR-NDIKAF----NLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv-~ss~~~~~Ps~a~~v~~~LGL~-~~v~~~----~l~~mGCsgg~~AL~lA~~l 236 (365)
+-..+|+++||+++|++|+|||++.. .+++....+.-...+.+-+|-. +..+.. .++.+..++|+..+-.+...
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~ 353 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQS 353 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHH
Confidence 45578999999999999999999986 3333333333333444444421 112222 23333455556666555555
Q ss_pred HHcc
Q 017814 237 FRTY 240 (365)
Q Consensus 237 l~ag 240 (365)
++.+
T Consensus 354 l~~~ 357 (407)
T cd00828 354 LEHG 357 (407)
T ss_pred HhcC
Confidence 6543
No 190
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=78.59 E-value=6.4 Score=38.81 Aligned_cols=60 Identities=13% Similarity=0.098 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCC-cHHHHHHHHcCCCCCceEEEecC
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAP-SLTSRIINRYNLRNDIKAFNLSG 220 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~P-s~a~~v~~~LGL~~~v~~~~l~~ 220 (365)
-.+.....++++|+++|++++|||.+.++..++..+. -.+..+++.|...-+++.+.++.
T Consensus 49 H~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~~p~~~v~h 109 (314)
T TIGR03723 49 HLEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALNKPLIGVNH 109 (314)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhCCCEEeccc
Confidence 4466678899999999999999999999876663332 12333444444333466677776
No 191
>PRK09604 UGMP family protein; Validated
Probab=77.85 E-value=4.4 Score=40.25 Aligned_cols=56 Identities=13% Similarity=0.137 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCC-----cHHHHHHHHcCCCCCceEEEecC
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAP-----SLTSRIINRYNLRNDIKAFNLSG 220 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~P-----s~a~~v~~~LGL~~~v~~~~l~~ 220 (365)
-.+.....++++|+++|++++|||.+.++..++..+. +.+.-++..++ ++...++.
T Consensus 51 H~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~----ipl~~v~h 111 (332)
T PRK09604 51 HVENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALN----KPLIGVNH 111 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhC----CCEEeecC
Confidence 4567778899999999999999999999876653332 22333444444 45555555
No 192
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=77.70 E-value=3.3 Score=41.79 Aligned_cols=76 Identities=13% Similarity=0.091 Sum_probs=43.2
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ecCCCCCCcHHHHHHHHcCCCC-CceEE----EecCCccchHHHHHHHHHHHHH
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLRN-DIKAF----NLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~-ss~~~~~Ps~a~~v~~~LGL~~-~v~~~----~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
..+|+++||+++|++|+|||++-.. +.+....+.-..-+.+-+|-+. +++.. .++....++|+..+-.+...++
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~ 357 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIR 357 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHh
Confidence 4578999999999999999999863 3232233333334555555321 12221 1233234555555555555565
Q ss_pred cc
Q 017814 239 TY 240 (365)
Q Consensus 239 ag 240 (365)
.+
T Consensus 358 ~~ 359 (411)
T PRK07314 358 DQ 359 (411)
T ss_pred CC
Confidence 54
No 193
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=77.23 E-value=4 Score=41.97 Aligned_cols=70 Identities=14% Similarity=0.185 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEE-eecCCCCCCcHHHHHHHHcCCCC------CceEEEecCCccchHHHHHHHH
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVV-NVSLFSPAPSLTSRIINRYNLRN------DIKAFNLSGMGCSASVVAVDLV 233 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv-~ss~~~~~Ps~a~~v~~~LGL~~------~v~~~~l~~mGCsgg~~AL~lA 233 (365)
=+.+|.+.||+++|++|+|||++-. .+++......=...+.+-+|=.. ..+++.=+..|++|.+-++-..
T Consensus 277 Ga~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vsstKs~tGH~lGAaGaveai~~~ 353 (412)
T COG0304 277 GAIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISL 353 (412)
T ss_pred hHHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhcccccCceeeecccccccChhhHHHHHHHHHH
Confidence 4568999999999999999999986 44444344433444444555111 1344444455666655554443
No 194
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=76.80 E-value=6 Score=42.10 Aligned_cols=76 Identities=12% Similarity=0.138 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEE-eecCCCCCCcHHHHHHHHcCCCCCceEE----EecCCccchHHHHHHHHHHHHHc
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVV-NVSLFSPAPSLTSRIINRYNLRNDIKAF----NLSGMGCSASVVAVDLVQQLFRT 239 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv-~ss~~~~~Ps~a~~v~~~LGL~~~v~~~----~l~~mGCsgg~~AL~lA~~ll~a 239 (365)
..+|+++||+++|++|+|||+|-. .+++....+.=...+.+-+|-.+.++.. .++....++|+..+..+...++.
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~ 486 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAIRT 486 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHHhc
Confidence 458999999999999999999876 3333222232233455556532222222 23332444555555555555655
Q ss_pred c
Q 017814 240 Y 240 (365)
Q Consensus 240 g 240 (365)
+
T Consensus 487 g 487 (540)
T PLN02787 487 G 487 (540)
T ss_pred C
Confidence 4
No 195
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=76.63 E-value=4.4 Score=40.62 Aligned_cols=45 Identities=13% Similarity=0.140 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ecCCCCCCcHHHHHHHHcCC
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNL 209 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~-ss~~~~~Ps~a~~v~~~LGL 209 (365)
..+|+++||+++|++|+|||.+... +.+....+.-...+.+.+|-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 4588999999999999999998863 33333334444445566653
No 196
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=75.92 E-value=5.2 Score=40.41 Aligned_cols=76 Identities=8% Similarity=0.014 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ecCCCCCCcHHHHHHHHcCCCCCce--EEEecCCccchHHHHHHHHHHHHHcc
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLRNDIK--AFNLSGMGCSASVVAVDLVQQLFRTY 240 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~-ss~~~~~Ps~a~~v~~~LGL~~~v~--~~~l~~mGCsgg~~AL~lA~~ll~ag 240 (365)
..+++++||+++|++|+|||.+... +.+....+.=...+.+-+|-+..+. .-.++...+++|+..+-.+...++.+
T Consensus 262 ~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~ 340 (392)
T PRK09185 262 AILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDGVPCSSTKGLTGHTLGAAGAVEAAICWLALRHG 340 (392)
T ss_pred HHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCCceeCCCcccccChhhcchHHHHHHHHHHhcC
Confidence 3589999999999999999998763 3222222333344555555211011 11233345566666666666666554
No 197
>PRK05790 putative acyltransferase; Provisional
Probab=75.80 E-value=7 Score=39.45 Aligned_cols=43 Identities=12% Similarity=0.195 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRN 211 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~ 211 (365)
...|+++|++++|++|+|||.+-+.- ..........+.||+.+
T Consensus 293 ~~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~l~~~e~lg~~~ 335 (393)
T PRK05790 293 PVPAIRKALEKAGWSLADLDLIEINE----AFAAQALAVEKELGLDP 335 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCCh
Confidence 35799999999999999999987631 22333445567888753
No 198
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=75.49 E-value=8.1 Score=38.90 Aligned_cols=42 Identities=17% Similarity=0.145 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCC
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLR 210 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~ 210 (365)
...|+++|++++|++|+|||.+-..- ..+....+..+.+|+.
T Consensus 260 ~~~a~~~al~~aGi~~~did~~e~~d----~ft~~~~~~~e~lgl~ 301 (389)
T PRK06064 260 AVVAAEKAYKMAGIEPKDIDVAEVHD----CFTIAEILAYEDLGFA 301 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecC----CCcHHHHHHHHHcCCC
Confidence 45799999999999999999987642 1222455667888874
No 199
>PRK14878 UGMP family protein; Provisional
Probab=75.46 E-value=7.1 Score=38.59 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeecCCCC
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVNVSLFSP 195 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~ 195 (365)
+....+++++|+++|++++|||.+.++..++..
T Consensus 46 ~~l~~~i~~~l~~a~~~~~did~Iavt~gPG~~ 78 (323)
T PRK14878 46 EVAPELLRKALEKAGISIEDIDAVAVSQGPGLG 78 (323)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcc
Confidence 334489999999999999999999998766533
No 200
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=75.16 E-value=2.2 Score=43.36 Aligned_cols=67 Identities=16% Similarity=0.203 Sum_probs=41.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccch-----HHHHHHHHHHHHH
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSA-----SVVAVDLVQQLFR 238 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsg-----g~~AL~lA~~ll~ 238 (365)
...|+++||+++|++|+|||.+=++- ......-...+.||+.+ ..++.+| |..+ |..++++...++.
T Consensus 292 ~~~a~~~al~~agl~~~Did~~ei~e----afa~~~l~~~e~lg~~~--~~vN~~G-G~~a~GHp~gatG~r~~~~l~~ 363 (392)
T PRK07108 292 PVFAVPKLLKQAGLKVDDIDLWELNE----AFAVQVLYCRDTLGIPM--DRLNVNG-GAIAVGHPYGVSGARLTGHALI 363 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCchHhhh----HHHHHHHHHHHhcCCCc--cccCCCC-ChHHhCcchhhhHHHHHHHHHH
Confidence 46899999999999999999986431 11112223456788764 3456666 4432 4455555444443
No 201
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=74.97 E-value=6.1 Score=40.15 Aligned_cols=50 Identities=14% Similarity=0.222 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG 220 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~ 220 (365)
...|+++|++++|++|+|||.+=++ ...+...-...+.||+.+ ..++++|
T Consensus 293 ~~~a~~~al~~agl~~~did~~e~~----d~f~~~~l~~~e~lg~~~--~pvN~~G 342 (393)
T PRK08235 293 PGYAINALLEKTGKTVEDIDLFEIN----EAFAAVALASTEIAGIDP--EKVNVNG 342 (393)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehhc----chhHHHHHHHHHHhCCCc--ccCCcCC
Confidence 4579999999999999999998653 133344555668889864 3445555
No 202
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=74.96 E-value=4.7 Score=40.89 Aligned_cols=77 Identities=9% Similarity=0.122 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEE-eecCCCCCCcHHHHHHHHcCCCCCceEE----EecCCccchHHHHHHHHHHHH
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVV-NVSLFSPAPSLTSRIINRYNLRNDIKAF----NLSGMGCSASVVAVDLVQQLF 237 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv-~ss~~~~~Ps~a~~v~~~LGL~~~v~~~----~l~~mGCsgg~~AL~lA~~ll 237 (365)
+-..+|+++||+++|++|+|||+|.. .+.+....+.-...+.+-+|-.+ ++.. .++...+++|+..+..+...+
T Consensus 270 ~~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~~-~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l 348 (399)
T cd00832 270 PGLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPRG-VPVTAPKTMTGRLYAGGAPLDVATALLAL 348 (399)
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCCC-CceeCCCchhcchHHHHHHHHHHHHHHHH
Confidence 34568999999999999999998876 33333334444445666666321 2221 223334556666666555566
Q ss_pred Hcc
Q 017814 238 RTY 240 (365)
Q Consensus 238 ~ag 240 (365)
+.+
T Consensus 349 ~~~ 351 (399)
T cd00832 349 RDG 351 (399)
T ss_pred hCC
Confidence 554
No 203
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=74.77 E-value=9.3 Score=38.85 Aligned_cols=67 Identities=16% Similarity=0.271 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccch-----HHHHHHHHHHHH
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSA-----SVVAVDLVQQLF 237 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsg-----g~~AL~lA~~ll 237 (365)
....|++++++++|++|+|||.+=++- ..+.......+.||+.+ ..++.+| |.-+ +..++++...++
T Consensus 289 ~~~~a~~~a~~~agl~~~Did~~Ei~d----~Fa~~~l~~~e~lG~~~--~pvN~~G-G~la~Ghp~gatG~r~~~~l~ 360 (390)
T PRK06504 289 APLPATERALKKAGMKIDDIDLYEVNE----AFASVPLAWLKATGADP--ERLNVNG-GAIALGHPLGASGTKLMTTLV 360 (390)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEecc----cchHHHHHHHHHhCCCC--CCcCCCC-cHHhcCCCcchhHHHHHHHHH
Confidence 345699999999999999999997642 23344556678999986 3477777 6543 444544444443
No 204
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=74.02 E-value=5.6 Score=40.09 Aligned_cols=66 Identities=18% Similarity=0.274 Sum_probs=44.9
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccch-----HHHHHHHHHHHHH
Q 017814 166 FDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSA-----SVVAVDLVQQLFR 238 (365)
Q Consensus 166 ~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsg-----g~~AL~lA~~ll~ 238 (365)
..|+++|++++|++|+|||.+=++ ...........+.||+.+ +.++.+| |.-+ +..++.+...++.
T Consensus 283 ~~a~~~a~~~agi~~~did~~e~~----d~Fa~~~~~~~e~lG~~~--~pvN~~G-G~l~~Ghp~gasG~~~~~e~~~ 353 (382)
T PRK07801 283 IPATRYALEKTGLSIDDIDVVEIN----EAFAPVVLAWLKETGADP--AKVNPNG-GAIALGHPLGATGAKLMTTLLH 353 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEeeec----ccchHHHHHHHHHhCCCc--hhcCCCc-chhhhcCcHHHHHHHHHHHHHH
Confidence 469999999999999999998664 123344455678899876 4567776 5432 4555555555443
No 205
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=73.72 E-value=6.6 Score=39.65 Aligned_cols=44 Identities=5% Similarity=-0.057 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRN 211 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~ 211 (365)
-...|+++|++++|++|+|||.+-+.- ..+.......+.||+.+
T Consensus 261 ~~~~a~~~a~~~agl~~~did~~e~~d----~f~~~~~~~~e~lg~~~ 304 (389)
T PRK07516 261 GPRRAWQRALAQAGVTLDDLSFVETHD----CFTIAELIEYEAMGLAP 304 (389)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEec----CCCHHHHHHHHHcCCCC
Confidence 345799999999999999999997742 33444556677888765
No 206
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=73.69 E-value=6 Score=40.37 Aligned_cols=43 Identities=14% Similarity=0.225 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRN 211 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~ 211 (365)
...|+++|++++|++|+|||.+=.. ...+...-+-.+.||+.+
T Consensus 305 ~~~a~~~al~~Agi~~~did~~ei~----d~f~~~~l~~le~lg~~~ 347 (406)
T PRK07851 305 PVEASKQALARAGMSIDDIDLVEIN----EAFAAQVLPSARELGIDE 347 (406)
T ss_pred HHHHHHHHHHHhCCCHHHCCeehhh----hHHHHHHHHHHHHhCCCc
Confidence 4579999999999999999998542 122333344457888754
No 207
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=73.26 E-value=4.9 Score=38.67 Aligned_cols=70 Identities=20% Similarity=0.172 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCC-cHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAP-SLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQ 235 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~P-s~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ 235 (365)
.-.+.....++++|+++|++++|||.+.++..++..++ -.+..+++.|...-+++.+.++. +.++..+..
T Consensus 28 ~H~~~L~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~~~Pli~v~~------l~a~a~~~~ 98 (268)
T PF00814_consen 28 QHSENLPPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALALNIPLIGVSH------LEAHALSAR 98 (268)
T ss_dssp HHHHHHHHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHTT--EEEEEH------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHhCCCeEeecc------HHHHHHhHh
Confidence 33456668899999999999999999999877764443 12333444444434467777777 555554443
No 208
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=73.02 E-value=14 Score=37.54 Aligned_cols=43 Identities=12% Similarity=0.164 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRN 211 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~ 211 (365)
...|+++|++++|++|+|||.+-+. ...+....+..+.||+.+
T Consensus 278 ~~~aa~~a~~~Agi~~~Didv~el~----D~fa~~~l~~le~lGl~~ 320 (403)
T PRK06289 278 VRQAVLDAYRRAGVGLDDLDGFEVH----DCFTPSEYLAIDHIGLTG 320 (403)
T ss_pred HHHHHHHHHHHcCCCHHHCeEEeee----ccchHHHHHHHHHcCCCC
Confidence 4579999999999999999998874 133445566678888764
No 209
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=72.86 E-value=11 Score=37.81 Aligned_cols=58 Identities=12% Similarity=0.168 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCc--HHHHHHHHcCCCCCceEEEecC
Q 017814 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPS--LTSRIINRYNLRNDIKAFNLSG 220 (365)
Q Consensus 162 ~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps--~a~~v~~~LGL~~~v~~~~l~~ 220 (365)
.+.....++++|+++|++++|||.+.++..++. .++ .....++.|.+.-+++.+.++.
T Consensus 50 ~~~l~~~i~~~l~~a~~~~~did~Iavt~GPGl-~~~LrVG~~~Ak~LA~a~~~PligV~H 109 (345)
T PTZ00340 50 REHILSLVKEALEEAKITPSDISLICYTKGPGM-GAPLSVGAVVARTLSLLWGKPLVGVNH 109 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCc-HhhHHHHHHHHHHHHHHcCCCEeecch
Confidence 355567889999999999999999999866652 232 2334455554444567777776
No 210
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=72.03 E-value=7.4 Score=39.18 Aligned_cols=43 Identities=14% Similarity=0.249 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRN 211 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~ 211 (365)
...|+++|++++|++|+|||.+-+.- ..+.......+.||+.+
T Consensus 287 ~~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~~~~~e~lg~~~ 329 (386)
T cd00751 287 PVPAIPKALKRAGLTLDDIDLIEINE----AFAAQALACLKELGLDP 329 (386)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeec----hhHHHHHHHHHHhCCCh
Confidence 45899999999999999999987631 11233444567888754
No 211
>PRK06158 thiolase; Provisional
Probab=71.94 E-value=12 Score=37.74 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRN 211 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~ 211 (365)
...|+++|++++|++|+|||.+=+.. ..+....+..+.||+.+
T Consensus 256 ~~~aa~~A~~~AGi~p~DId~~ElyD----~Fs~~~l~~~E~lG~~~ 298 (384)
T PRK06158 256 AAESGPRAFAMAGLTPADIDVVELYD----AFTINTILFLEDLGFCA 298 (384)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEecC----CchHHHHHHHHHcCCCC
Confidence 45799999999999999999987631 23344455557777654
No 212
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=71.75 E-value=10 Score=38.67 Aligned_cols=78 Identities=9% Similarity=-0.006 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHh-CCCCCCCccEEEEe-ecCCCCCCcHHHHHHHHcCCCC--CceEE----EecCCccchHHHHHHHHH
Q 017814 163 EIIFDTLDKLFAR-TDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLRN--DIKAF----NLSGMGCSASVVAVDLVQ 234 (365)
Q Consensus 163 ~La~~A~~~aL~~-agi~p~dID~LIv~-ss~~~~~Ps~a~~v~~~LGL~~--~v~~~----~l~~mGCsgg~~AL~lA~ 234 (365)
.-..+|+++||++ +|++|+|||++-.. +.+....+.-...+.+-+|-.. .++.. .++....++|+..+-.+.
T Consensus 283 ~~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~ 362 (421)
T PTZ00050 283 RGARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTI 362 (421)
T ss_pred HHHHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHH
Confidence 3456799999999 99999999999873 3332222222334555565321 12211 233334455566665555
Q ss_pred HHHHcc
Q 017814 235 QLFRTY 240 (365)
Q Consensus 235 ~ll~ag 240 (365)
..++.+
T Consensus 363 l~l~~~ 368 (421)
T PTZ00050 363 LSLYEQ 368 (421)
T ss_pred HHHHcC
Confidence 556654
No 213
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=71.73 E-value=19 Score=37.04 Aligned_cols=24 Identities=8% Similarity=0.151 Sum_probs=21.5
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe
Q 017814 166 FDTLDKLFARTDISPSEIDVLVVN 189 (365)
Q Consensus 166 ~~A~~~aL~~agi~p~dID~LIv~ 189 (365)
..|+++|++++|++++|||.+=+.
T Consensus 314 ~~a~~~al~~Agl~~~Did~~Ei~ 337 (430)
T TIGR02446 314 SYATPLALQRAGLALSDLTLIDMH 337 (430)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEec
Confidence 468999999999999999999774
No 214
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=71.60 E-value=5.7 Score=40.21 Aligned_cols=76 Identities=11% Similarity=0.128 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEE-eecCCCCCCcHHHHHHHHcCCCCCceEE----EecCCccchHHHHHHHHHHHH
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVV-NVSLFSPAPSLTSRIINRYNLRNDIKAF----NLSGMGCSASVVAVDLVQQLF 237 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv-~ss~~~~~Ps~a~~v~~~LGL~~~v~~~----~l~~mGCsgg~~AL~lA~~ll 237 (365)
+-..+|+++||+++|++|+|||++-. .+++....+.-...+.+-+|= +++.. .++....++|+..+..+...+
T Consensus 254 ~~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg~--~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l 331 (381)
T PRK05952 254 KSAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFPH--RVAVSSTKGATGHTLGASGALGVAFSLLAL 331 (381)
T ss_pred HHHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcCC--CCeeecchhhhccChHHHHHHHHHHHHHHH
Confidence 34678999999999999999999886 333322223323334445551 12221 222223445555555555555
Q ss_pred Hcc
Q 017814 238 RTY 240 (365)
Q Consensus 238 ~ag 240 (365)
+.+
T Consensus 332 ~~~ 334 (381)
T PRK05952 332 RHQ 334 (381)
T ss_pred hcC
Confidence 544
No 215
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=71.50 E-value=4.5 Score=41.06 Aligned_cols=43 Identities=7% Similarity=0.115 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRN 211 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~ 211 (365)
...|+++||+++|++|+|||.+=+.- ..+.......+.||+.+
T Consensus 271 ~~~A~~~al~~Agi~~~DID~~Ei~d----~Fa~~~l~~~e~lgl~~ 313 (393)
T cd00826 271 PIEAARKALEKAGLGIGDLDLIEAHD----AFAANACATNEALGLCP 313 (393)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehhh----hhHHHHHHHHHHhCCCc
Confidence 36899999999999999999887641 23344555667788764
No 216
>PRK08256 lipid-transfer protein; Provisional
Probab=70.92 E-value=12 Score=37.67 Aligned_cols=43 Identities=14% Similarity=0.179 Sum_probs=33.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRN 211 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~ 211 (365)
...|++++++++|++++|||.+-+.- ..+...-...+.||+.+
T Consensus 266 ~~~a~~~a~~~ag~~~~DiD~~ei~d----~f~~~~l~~le~lg~~~ 308 (391)
T PRK08256 266 TRAAAQQVYEQAGIGPEDIDVVELHD----CFSANELLTYEALGLCP 308 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeecc----CCcHHHHHHHHHcCCCC
Confidence 35799999999999999999987741 33445556668888876
No 217
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=70.76 E-value=8.2 Score=39.40 Aligned_cols=53 Identities=19% Similarity=0.308 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCc
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMG 222 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mG 222 (365)
...|+++|++++|++|+|||.+=++- ......-...+.||+..+...++.+| |
T Consensus 298 ~~~a~~~a~~~agl~~~did~~ei~d----~Fa~~~l~~~e~lg~~~~~~~vN~~G-G 350 (401)
T PRK08131 298 PVEAIKKALARAGLTLDDMDIIEINE----AFASQVLGCLKGLGVDFDDPRVNPNG-G 350 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCeehhcc----HHHHHHHHHHHHcCCCCCCCCccCCc-c
Confidence 46899999999999999999987641 11122334557888853334566666 5
No 218
>PRK07937 lipid-transfer protein; Provisional
Probab=70.36 E-value=15 Score=36.81 Aligned_cols=49 Identities=16% Similarity=0.135 Sum_probs=32.6
Q ss_pred HHHHHHHHh-CCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC
Q 017814 167 DTLDKLFAR-TDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG 220 (365)
Q Consensus 167 ~A~~~aL~~-agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~ 220 (365)
.++++++++ +|++|+|||.+=+. ...+.......+.||+.++ ..++.+|
T Consensus 250 ~~~~~a~~~aAgi~~~diD~~Ei~----D~F~~~~l~~~e~lGl~g~-~pvN~~G 299 (352)
T PRK07937 250 PSTALAAEAATGGDAGGVDVAELH----APFTHQELILREALGLGDK-TKVNPSG 299 (352)
T ss_pred HHHHHHHHHhcCCCHHHCCEEEEe----CCChHHHHHHHHHcCCCCC-CCcCCCc
Confidence 334455555 59999999999764 2344556667789998653 3456666
No 219
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=70.33 E-value=12 Score=37.68 Aligned_cols=43 Identities=9% Similarity=0.101 Sum_probs=32.4
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRN 211 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~ 211 (365)
...|+++|++++|++|+|||.+-+.- ..+.......+.||+.+
T Consensus 259 ~~~a~~~al~~Agi~~~DiD~~ei~d----~ft~~~l~~le~lGl~~ 301 (385)
T PRK12578 259 TQLAARQAYNMAKVTPNDIEVATVHD----AFTIAEIMGYEDLGFTE 301 (385)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecC----cChHHHHHHHHHcCCCC
Confidence 45799999999999999999976631 23345556667888765
No 220
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=70.03 E-value=11 Score=38.87 Aligned_cols=43 Identities=12% Similarity=0.106 Sum_probs=33.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRN 211 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~ 211 (365)
+..|+++|++++|++|+|||.+=++- ..+...-+..+.||+.+
T Consensus 311 ~~~A~~~a~~~AGl~~~DiD~~Ei~d----aFa~~~l~~~e~lGl~~ 353 (438)
T PTZ00455 311 SRAAAQKALSMAGVKPSDLQVAEVHD----CFTIAELLMYEALGIAE 353 (438)
T ss_pred HHHHHHHHHHHcCCCHHHCcEeeecc----cChHHHHHHHHHcCCCC
Confidence 46899999999999999999997742 33445556668888876
No 221
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=69.98 E-value=10 Score=37.89 Aligned_cols=46 Identities=11% Similarity=0.151 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEE-eecCCCCCCcHHHHHHHHcC
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVV-NVSLFSPAPSLTSRIINRYN 208 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv-~ss~~~~~Ps~a~~v~~~LG 208 (365)
+-..+|+++||+++|++|+|||.+-. .+.+....+.=...+.+-+|
T Consensus 206 ~~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg 252 (342)
T PRK14691 206 DGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFG 252 (342)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhC
Confidence 44667999999999999999998776 33333334444455666666
No 222
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=69.95 E-value=10 Score=32.29 Aligned_cols=63 Identities=10% Similarity=0.235 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHc-CCCCCceEEEecCCccch
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRY-NLRNDIKAFNLSGMGCSA 225 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~L-GL~~~v~~~~l~~mGCsg 225 (365)
..+-..+-.++.+++.+++++||--++++.+.+ ..-...+..++++ |+.. ++-++...|.=-|
T Consensus 18 I~~at~eLl~~ii~~N~l~~edivSv~FT~T~D-L~a~FPA~aaR~~~Gw~~-Vplmc~qEm~V~g 81 (117)
T TIGR01796 18 IGEAVAELLTELMERNELTPEDLISVIFTVTED-LHADFPAAAARGLPGWTD-VPVMCAQEIPVEG 81 (117)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHEEEEEEEecCc-ccccChHHHHHhccCCCC-cceeccCcCCCCC
Confidence 333344456677889999999999999876654 2222334556677 9975 9988888866555
No 223
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=69.86 E-value=6.1 Score=40.47 Aligned_cols=76 Identities=13% Similarity=0.087 Sum_probs=42.1
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe-ecCCCCCCcHHHHHHHHcCCC-CCceEE----EecCCccchHHHHHHHHHHHHH
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLR-NDIKAF----NLSGMGCSASVVAVDLVQQLFR 238 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~-ss~~~~~Ps~a~~v~~~LGL~-~~v~~~----~l~~mGCsgg~~AL~lA~~ll~ 238 (365)
..+++++||+++|++|+|||++... +++....+.=..-+.+-+|-+ ++++.. .++....++|+..+-.+...++
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~ 370 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQ 370 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHHHh
Confidence 5688999999999999999999873 333222232223344445421 122222 2223234445555555555555
Q ss_pred cc
Q 017814 239 TY 240 (365)
Q Consensus 239 ag 240 (365)
.+
T Consensus 371 ~~ 372 (425)
T PRK06501 371 TG 372 (425)
T ss_pred cC
Confidence 54
No 224
>PRK06059 lipid-transfer protein; Provisional
Probab=69.31 E-value=16 Score=36.97 Aligned_cols=42 Identities=19% Similarity=0.236 Sum_probs=29.7
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 017814 166 FDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRN 211 (365)
Q Consensus 166 ~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~ 211 (365)
..|+++|++++|++++|||.+=+.-+ .........+.||+.+
T Consensus 276 ~~a~~~a~~~agl~~~Did~~El~d~----f~~~~l~~~e~lGl~~ 317 (399)
T PRK06059 276 DQILDAAYAEAGIGPEDLSLAEVYDL----STALELDWYEHLGLCP 317 (399)
T ss_pred HHHHHHHHHHcCCCHHHCcEEeeccc----ChHHHHHHHHHcCCCC
Confidence 46799999999999999999977421 1122333347888764
No 225
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=68.86 E-value=11 Score=37.01 Aligned_cols=31 Identities=13% Similarity=0.182 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeecCC
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVNVSLF 193 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~ss~~ 193 (365)
+....+++++|+++|++++|||.|.++..++
T Consensus 47 ~~l~~~i~~~l~~~~~~~~did~Iavt~gPg 77 (322)
T TIGR03722 47 EVAPKLIKEALEEAGVSLEDIDAVAFSQGPG 77 (322)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEecCCc
Confidence 3344559999999999999999999986554
No 226
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=68.78 E-value=13 Score=37.49 Aligned_cols=55 Identities=15% Similarity=0.214 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCC-----cHHHHHHHHcCCCCCceEEEecC
Q 017814 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAP-----SLTSRIINRYNLRNDIKAFNLSG 220 (365)
Q Consensus 162 ~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~P-----s~a~~v~~~LGL~~~v~~~~l~~ 220 (365)
.+-..+++++||+++|..|+|+|++-|+..++.+.+ +.|..++.++.. +-..|+.
T Consensus 83 r~ni~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~k----PlipVHH 142 (405)
T KOG2707|consen 83 RENIPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQK----PLIPVHH 142 (405)
T ss_pred HHHHHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccC----CccchhH
Confidence 355667889999999999999999999877775544 355566666654 3344555
No 227
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=68.57 E-value=7.4 Score=39.53 Aligned_cols=45 Identities=13% Similarity=0.062 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe-ecCCCCCCcHHHHHHHHcC
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYN 208 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~-ss~~~~~Ps~a~~v~~~LG 208 (365)
-..+|+++||+++|++|+|||++-.. +.+....+.=...+.+.+|
T Consensus 289 ~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 289 GARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 45689999999999999999998763 3232223333445566666
No 228
>PLN03170 chalcone synthase; Provisional
Probab=67.61 E-value=17 Score=37.12 Aligned_cols=71 Identities=13% Similarity=0.214 Sum_probs=48.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceE-----E-EecCCccchHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA-----F-NLSGMGCSASVVAVDLV 233 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~-----~-~l~~mGCsgg~~AL~lA 233 (365)
.+.+...+.++++|+++|+.++|||..++.. ..+.+-..+.++||++++... + +.++|+.++-+.+|+..
T Consensus 278 ~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hq----gg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~ 353 (401)
T PLN03170 278 LISKNIERSLEEAFKPLGITDYNSIFWVAHP----GGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEM 353 (401)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCeEEecC----CcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 4556666788899999999999999977641 244556678899999875432 2 34455555555666655
Q ss_pred H
Q 017814 234 Q 234 (365)
Q Consensus 234 ~ 234 (365)
.
T Consensus 354 ~ 354 (401)
T PLN03170 354 R 354 (401)
T ss_pred H
Confidence 3
No 229
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=67.47 E-value=8.8 Score=35.16 Aligned_cols=60 Identities=20% Similarity=0.249 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCC-cHHHHHHHHcCCCCCceEEEecC
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAP-SLTSRIINRYNLRNDIKAFNLSG 220 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~P-s~a~~v~~~LGL~~~v~~~~l~~ 220 (365)
..+.....++++|+++|++++|||.++++..++..+. -.+..+++-|....+++.+.++.
T Consensus 33 h~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTGlRig~~~akgla~~~~~p~~~vss 93 (202)
T TIGR03725 33 HSEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTGLRIGLATAKGLALALGIPLVGVSS 93 (202)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhCCCEEecCH
Confidence 3466677899999999999999999999876664444 12333444443333456666655
No 230
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=67.02 E-value=10 Score=38.74 Aligned_cols=77 Identities=6% Similarity=-0.073 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEE-eecCCCCCCcHHHHHHHHcCCC--CCceEEE----ecCCccchHHHHHHHHHHH
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVV-NVSLFSPAPSLTSRIINRYNLR--NDIKAFN----LSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv-~ss~~~~~Ps~a~~v~~~LGL~--~~v~~~~----l~~mGCsgg~~AL~lA~~l 236 (365)
-..+|+++||+++|++|+|||++-. .+.+....+.=...|.+-+|-. ..++... ++....++|+..+-.+...
T Consensus 279 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~ 358 (414)
T PRK08722 279 GGALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMS 358 (414)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHH
Confidence 3467899999999999999999876 3333333444344555656521 1133222 2232344555555555555
Q ss_pred HHcc
Q 017814 237 FRTY 240 (365)
Q Consensus 237 l~ag 240 (365)
++.+
T Consensus 359 l~~~ 362 (414)
T PRK08722 359 LVDQ 362 (414)
T ss_pred HhcC
Confidence 5544
No 231
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=66.91 E-value=23 Score=35.88 Aligned_cols=69 Identities=22% Similarity=0.300 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCC-ceEEEecCCccch-----HHHHHHHHHHHHH
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRND-IKAFNLSGMGCSA-----SVVAVDLVQQLFR 238 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~-v~~~~l~~mGCsg-----g~~AL~lA~~ll~ 238 (365)
...|++++++++|++|+|||.+=++ .......-...+.||+-+. -..++.+| |.-+ |.+++++...+++
T Consensus 282 ~~~a~~~al~~AGi~p~DId~~Ei~----daFa~~~l~~~e~lg~~~~g~~~vN~~G-G~la~GhP~GATG~r~v~~l~~ 356 (385)
T TIGR02445 282 PVPATQKALKRAGLSISDIDVFELN----EAFAAQALPCLKDLGLLDKMDEKVNLNG-GAIALGHPLGCSGARISTTLLN 356 (385)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEEc----cccHHHHHHHHHHcCCCCCCCCCcCCCC-chhhcCCCccccHHHHHHHHHH
Confidence 4679999999999999999988664 1233444455678887331 13445555 4321 4444555544443
No 232
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=66.04 E-value=17 Score=36.65 Aligned_cols=27 Identities=15% Similarity=0.352 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEe
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVN 189 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~ 189 (365)
....+|+++||+++|++|+|||.+...
T Consensus 279 ~~~~~a~~~al~~Agl~~~dId~i~~h 305 (424)
T smart00825 279 PAQARLIRQALARAGVDPADVDYVEAH 305 (424)
T ss_pred HHHHHHHHHHHHHhCCCHHHccEEEee
Confidence 345678999999999999999999874
No 233
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=65.58 E-value=8 Score=39.22 Aligned_cols=65 Identities=14% Similarity=0.214 Sum_probs=41.0
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccch-----HHHHHHHHHHHH
Q 017814 166 FDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSA-----SVVAVDLVQQLF 237 (365)
Q Consensus 166 ~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsg-----g~~AL~lA~~ll 237 (365)
..+++++++++|++|+|||.+=++- ..+.......+.+|+.+ ..++.+| |..+ |..++.....++
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~d----~f~~~~l~~~e~lg~~~--~~vN~~G-G~l~~Ghp~gasG~~~~~~~~ 363 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEINE----AFSVVALANQKLLGLDP--EKVNVHG-GAVSLGHPIGCSGARILVTLL 363 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCCc--cccCCCC-ChHhhCCCHHHHHHHHHHHHH
Confidence 4699999999999999999987631 22334445567888754 3345555 4322 444444444443
No 234
>PLN03173 chalcone synthase; Provisional
Probab=65.24 E-value=18 Score=36.75 Aligned_cols=51 Identities=12% Similarity=0.183 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCce
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIK 214 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~ 214 (365)
-+.+...+.++++|++.|+.++|||..++. ...+..-..+.++||++++..
T Consensus 274 ~~~~~~~~~i~~~L~~~gl~~~di~~~v~H----qgg~~Il~~v~~~LgL~~ekl 324 (391)
T PLN03173 274 LISKNVEKSLTEAFKPLGISDWNSLFWIAH----PGGPAILDQVEAKLALKPEKL 324 (391)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCeEEEC----CCcHHHHHHHHHHcCCChHHH
Confidence 455666677889999999999999997764 234566677899999987543
No 235
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=65.12 E-value=14 Score=37.08 Aligned_cols=78 Identities=14% Similarity=0.158 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEe-ecCCCCCCcHHHHHHHHcCCC----CCceEE----EecCCccchHHHHHHHH
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLR----NDIKAF----NLSGMGCSASVVAVDLV 233 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~-ss~~~~~Ps~a~~v~~~LGL~----~~v~~~----~l~~mGCsgg~~AL~lA 233 (365)
+-..+|+++||+++|++++|||.+... +.+....+.-...+.+-++-. ..++.. .++....++|+..+-.+
T Consensus 279 ~~~~~a~~~al~~Agi~~~did~i~~hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~ 358 (421)
T cd00833 279 EAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKV 358 (421)
T ss_pred HHHHHHHHHHHHHhCCCHHHCcEEEeeCCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHH
Confidence 455689999999999999999999874 322222222223344433321 011111 12333445566666666
Q ss_pred HHHHHcc
Q 017814 234 QQLFRTY 240 (365)
Q Consensus 234 ~~ll~ag 240 (365)
...++.+
T Consensus 359 ~~~l~~~ 365 (421)
T cd00833 359 VLALEHG 365 (421)
T ss_pred HHHHhcC
Confidence 6666654
No 236
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=64.48 E-value=9.4 Score=38.88 Aligned_cols=45 Identities=4% Similarity=0.073 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEE-eecCCCCCCcHHHHHHHHcC
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVV-NVSLFSPAPSLTSRIINRYN 208 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv-~ss~~~~~Ps~a~~v~~~LG 208 (365)
-..++++++|+++|++|+|||.+.. .+++....+.-...+.+-+|
T Consensus 276 ~~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg 321 (405)
T PRK09116 276 TMQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhC
Confidence 3468999999999999999999986 34343334444455666666
No 237
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=64.42 E-value=12 Score=38.34 Aligned_cols=45 Identities=11% Similarity=0.081 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEE-eecCCCCCCcHHHHHHHHcC
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVV-NVSLFSPAPSLTSRIINRYN 208 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv-~ss~~~~~Ps~a~~v~~~LG 208 (365)
-..+++++||+++|++|+|||++-. .+++....+.=...+.+-+|
T Consensus 287 ~~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg 332 (418)
T PRK07910 287 RAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALG 332 (418)
T ss_pred HHHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhC
Confidence 3568999999999999999999976 33333334444455666666
No 238
>PLN03171 chalcone synthase-like protein; Provisional
Probab=62.79 E-value=22 Score=36.15 Aligned_cols=87 Identities=10% Similarity=0.165 Sum_probs=52.3
Q ss_pred hhHHHHHHHHHHHHHHh---------CCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceE-----E-EecCCcc
Q 017814 159 SEMDEIIFDTLDKLFAR---------TDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA-----F-NLSGMGC 223 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~---------agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~-----~-~l~~mGC 223 (365)
+....+..+++++++++ .|++++||+.+++ ...+.+-..+.++||++++... + +.++|++
T Consensus 275 ~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~~H-----q~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtss 349 (399)
T PLN03171 275 RQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAVH-----PGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFG 349 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEEEc-----CCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchh
Confidence 45566676666776665 5888899987743 1233566678999999875432 2 4455555
Q ss_pred chHHHHHHHHHHHHHc--ccC---CeEEEEEe
Q 017814 224 SASVVAVDLVQQLFRT--YKN---KLAIVVST 250 (365)
Q Consensus 224 sgg~~AL~lA~~ll~a--g~~---~~aLVV~~ 250 (365)
++-..+|+.+..-.+. .+. +++|+++.
T Consensus 350 aSip~~L~~~~~~~~~~~~~G~~~d~vll~~f 381 (399)
T PLN03171 350 ATVIFALDELRRQMEEAAAAGAWPELGVMMAF 381 (399)
T ss_pred hhHHHHHHHHHhhHhhcCCCCCCcceEEEEEE
Confidence 5556666655432211 122 66776664
No 239
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=62.10 E-value=21 Score=37.54 Aligned_cols=61 Identities=13% Similarity=0.203 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcH--HHHHHHHcCCCCCceEEEecCCccch
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSL--TSRIINRYNLRNDIKAFNLSGMGCSA 225 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~--a~~v~~~LGL~~~v~~~~l~~mGCsg 225 (365)
....+++++|+++|++++|||.|.++..++.. +++ +...++.|...-+++...++.|-|-+
T Consensus 51 ~l~~~i~~~l~~~~~~~~~id~iav~~gPg~~-~~l~vg~~~ak~la~~~~~~~~~v~h~~aH~ 113 (535)
T PRK09605 51 AIPKVIKEALEEAGLKPEDIDLVAFSQGPGLG-PCLRVVATAARALALSLDVPLIGVNHCVAHV 113 (535)
T ss_pred HHHHHHHHHHHHcCCCHhhCCEEEECCCCCcH-hhHHHHHHHHHHHHHHhCCCeecccHHHHHH
Confidence 44489999999999999999999998666522 222 22233334333335566666644443
No 240
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=61.93 E-value=21 Score=30.43 Aligned_cols=64 Identities=13% Similarity=0.190 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccch
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSA 225 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsg 225 (365)
..+-..+-.++.+++.+++++||--++++.+.+ ..-...+..++++|.-.+++-++...|.=-|
T Consensus 18 I~~at~eLl~~i~~~N~l~~edivSv~FT~T~D-L~a~FPA~aaR~~~~~~~Vplmc~qE~~V~g 81 (117)
T cd02185 18 ILEATRELLEEIIERNNIKPEDIISVIFTVTPD-LDAAFPAKAARELGGWKYVPLMCAQEMDVPG 81 (117)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCc-ccccChHHHHHhcCCCCCcceeecCcCCCCC
Confidence 333344456677889999999999999876654 2222334566777544458888888866555
No 241
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=61.54 E-value=14 Score=37.89 Aligned_cols=25 Identities=8% Similarity=0.266 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEE
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVV 188 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv 188 (365)
-..+|+++||+++|++|+|||++-.
T Consensus 300 ~~~~a~~~Al~~Agi~~~dId~ve~ 324 (437)
T PLN02836 300 GAVLAMTRALQQSGLHPNQVDYVNA 324 (437)
T ss_pred HHHHHHHHHHHHcCCCHhHcCEEEc
Confidence 3567899999999999999999876
No 242
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=60.17 E-value=33 Score=33.95 Aligned_cols=117 Identities=10% Similarity=0.075 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCC-ccEEEEeecCCCCCCcHHHHHHHHcC--CCCCceEEEecCCccchHHHHHHHHHHHH
Q 017814 161 MDEIIFDTLDKLFARTDISPSE-IDVLVVNVSLFSPAPSLTSRIINRYN--LRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~d-ID~LIv~ss~~~~~Ps~a~~v~~~LG--L~~~v~~~~l~~mGCsgg~~AL~lA~~ll 237 (365)
+.+-..+++++|++++|+++++ +..|.+.-|.. ..|..-..+.+.+. .+..+..|-+.. - ++-.+...-
T Consensus 45 ~~~rie~~i~~A~~k~g~d~~~~lr~lgL~lSg~-d~e~~~~~lv~~~R~~fps~ae~~~v~s-D------a~~sl~a~t 116 (336)
T KOG1794|consen 45 CASRIEDMIREAKEKAGWDKKGPLRSLGLGLSGT-DQEDKNRKLVTEFRDKFPSVAENFYVTS-D------ADGSLAAAT 116 (336)
T ss_pred HHHHHHHHHHHHHhhcCCCccCccceeeeecccC-CchhHHHHHHHHHHHhccchhheeeeeh-h------HHHHHhhcC
Confidence 4455667889999999999999 88888753332 34444444444442 223345555554 0 111111111
Q ss_pred HcccCCeEEEEEeccCCCCCcCC-CCcchhhhhhhccCCeEEEEEeecc
Q 017814 238 RTYKNKLAIVVSTESMGPNWYCG-REKSMMLSNILFRSGGCSMLLTNNR 285 (365)
Q Consensus 238 ~ag~~~~aLVV~~E~~S~~~~~~-~dr~~lv~~~LFgDGAAAvlLs~~~ 285 (365)
..+....||+-++.....-+.++ .....---.-+.|||++|..++++.
T Consensus 117 ~g~~~GiVLiaGTgs~crl~~~DGs~~~~ggwg~~iGd~GSaywia~~A 165 (336)
T KOG1794|consen 117 PGGEGGIVLIAGTGSNCRLVNPDGSEKGAGGWGHMIGDGGSAYWIARQA 165 (336)
T ss_pred CCCCCcEEEEecCCceeEEECCCCCccCCCCCCCccCCCcchhhhhhhh
Confidence 22346788888887665333222 2211111246789999999887653
No 243
>PRK07855 lipid-transfer protein; Provisional
Probab=59.83 E-value=37 Score=34.35 Aligned_cols=24 Identities=21% Similarity=0.411 Sum_probs=21.5
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe
Q 017814 166 FDTLDKLFARTDISPSEIDVLVVN 189 (365)
Q Consensus 166 ~~A~~~aL~~agi~p~dID~LIv~ 189 (365)
..|+++|++++|++|+|||.+=+.
T Consensus 269 ~~aa~~a~~~AGi~~~DiDv~El~ 292 (386)
T PRK07855 269 GLVARQLWAQSGLGPADIDTAILY 292 (386)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEec
Confidence 479999999999999999998763
No 244
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=59.47 E-value=23 Score=30.23 Aligned_cols=59 Identities=17% Similarity=0.308 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCC--CCCCcHHHHHHHHc-CCCCCceEEEecCCc
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLF--SPAPSLTSRIINRY-NLRNDIKAFNLSGMG 222 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~--~~~Ps~a~~v~~~L-GL~~~v~~~~l~~mG 222 (365)
+..+-..+-.++.+++.+++++||-.++++++.+ ...|.. .++++ |+.. ++-++...|.
T Consensus 17 ~I~~at~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~---a~R~~~g~~~-Vpl~c~~E~~ 78 (118)
T PF07736_consen 17 EILEATRELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAA---AARELPGWDD-VPLMCAQEMD 78 (118)
T ss_dssp HHHHHHHHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCH---HHHHTTTGTT-SEEEEEE---
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHH---HHHccCCCCc-cceeccCcCC
Confidence 3344445556777889999999999999977665 224443 34566 8865 8888877743
No 245
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=54.93 E-value=26 Score=35.62 Aligned_cols=23 Identities=17% Similarity=0.408 Sum_probs=21.1
Q ss_pred HHHHHHHHHhCCCCCCCccEEEE
Q 017814 166 FDTLDKLFARTDISPSEIDVLVV 188 (365)
Q Consensus 166 ~~A~~~aL~~agi~p~dID~LIv 188 (365)
.+++++||+++|++|+|||++..
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~ 306 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNP 306 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEc
Confidence 58999999999999999998876
No 246
>CHL00094 dnaK heat shock protein 70
Probab=53.76 E-value=27 Score=37.59 Aligned_cols=48 Identities=10% Similarity=0.137 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRN 211 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~ 211 (365)
+-....++++|+++|++++|||.|+++.. ....|.+-..+.+.+|...
T Consensus 309 ~~~~~~i~~~L~~a~~~~~~i~~ViLvGG-ssriP~v~~~l~~~fg~~~ 356 (621)
T CHL00094 309 NRCRIPVENALKDAKLDKSDIDEVVLVGG-STRIPAIQELVKKLLGKKP 356 (621)
T ss_pred HHHHHHHHHHHHHcCCChhhCcEEEEECC-ccCChHHHHHHHHHhCCCc
Confidence 33445578999999999999999998642 2479999999999998543
No 247
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=53.12 E-value=39 Score=34.26 Aligned_cols=69 Identities=17% Similarity=0.279 Sum_probs=48.2
Q ss_pred hHHhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCC--------cHHHHHHHHcCCCCCceEEEecCCcc
Q 017814 154 LAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAP--------SLTSRIINRYNLRNDIKAFNLSGMGC 223 (365)
Q Consensus 154 ~~~~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~P--------s~a~~v~~~LGL~~~v~~~~l~~mGC 223 (365)
+.+...+..++..+|++++++++|+++++||.|=.-..+-+-.| +-.+.|+++.|++- +.-|....|+-
T Consensus 62 l~~l~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~V-V~DFR~~D~a~ 138 (365)
T PRK09585 62 LAELDTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGITV-VADFRRRDVAA 138 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcCE-EecChHHHHhc
Confidence 34455667788899999999999999999999876432322233 45688999999864 55554443333
No 248
>PRK13410 molecular chaperone DnaK; Provisional
Probab=52.96 E-value=37 Score=37.08 Aligned_cols=70 Identities=13% Similarity=0.173 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHH
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDL 232 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~l 232 (365)
+...+-..+.++++|+++|++++|||.|+++..+ ...|.+-.++.+.+|..+ ..+++..-|.+-..|+..
T Consensus 305 ~~l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGs-sRiP~V~~~l~~~fg~~~---~~~~npdeaVA~GAAi~a 374 (668)
T PRK13410 305 GDLLDRLLRPVKRALKDAGLSPEDIDEVVLVGGS-TRMPMVQQLVRTLIPREP---NQNVNPDEVVAVGAAIQA 374 (668)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCc-cccHHHHHHHHHHcCCCc---ccCCCCchHHHHhHHHHH
Confidence 3444555666889999999999999999986422 468999999999998543 334455345544444443
No 249
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=52.60 E-value=34 Score=36.57 Aligned_cols=71 Identities=11% Similarity=0.140 Sum_probs=48.5
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHH
Q 017814 157 AFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVD 231 (365)
Q Consensus 157 ~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~ 231 (365)
..+...+=..+.++++|+++|+++++||.|+++..+ ...|..-..+.+.+|-.. ..+++..-|.+-..|+.
T Consensus 299 l~~~l~~~~~~~i~~~l~~a~~~~~~i~~V~LvGGs-sriP~v~~~i~~~f~~~~---~~~~~pdeava~GAa~~ 369 (595)
T TIGR02350 299 LTADLVERTKEPVRQALKDAGLSASDIDEVILVGGS-TRIPAVQELVKDFFGKEP---NKSVNPDEVVAIGAAIQ 369 (595)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHhHCcEEEEECCc-ccChHHHHHHHHHhCCcc---cCCcCcHHHHHHHHHHH
Confidence 333444445566789999999999999999986422 369999999999998432 33444445555444444
No 250
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=51.77 E-value=41 Score=34.63 Aligned_cols=69 Identities=13% Similarity=0.120 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhCCCC--CCCccEEEEeecCCCCCCcHHHHHHHHcCCCCC----------------ceEEEecCCcc---
Q 017814 165 IFDTLDKLFARTDIS--PSEIDVLVVNVSLFSPAPSLTSRIINRYNLRND----------------IKAFNLSGMGC--- 223 (365)
Q Consensus 165 a~~A~~~aL~~agi~--p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~----------------v~~~~l~~mGC--- 223 (365)
...|+++|++++|++ ++|||.+=+.- ..+...-...+.||+.+. -..+|.+| |-
T Consensus 295 ~~~a~~~a~~~AGl~~~~~DiD~~Ei~D----~Fa~~~l~~lE~lGl~~~Ge~~~~~~~G~~~~~G~~piNt~G-G~la~ 369 (430)
T PRK06365 295 GRMAAKEAYEMAGITDPLNDLDLIELHD----AYTSSEIQTYEDLGLCKYGEGGQFIESGKPELPGKLPVNPSG-GLLAA 369 (430)
T ss_pred HHHHHHHHHHHcCCCCCHHHCCEEEeec----CCcHHHHHHHHHcCCCCCCchHHHHHCCCcCCCCCccccCCC-chhcC
Confidence 457999999999997 79999997742 233344456677887651 12455555 32
Q ss_pred --chHHHHHHHHHHHHH
Q 017814 224 --SASVVAVDLVQQLFR 238 (365)
Q Consensus 224 --sgg~~AL~lA~~ll~ 238 (365)
..|..++..+..++.
T Consensus 370 Ghp~GatG~~~~~e~~~ 386 (430)
T PRK06365 370 GHAVGATGIMQAVFMFW 386 (430)
T ss_pred CCcccHHHHHHHHHHHH
Confidence 335666666666555
No 251
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=51.41 E-value=39 Score=34.34 Aligned_cols=42 Identities=17% Similarity=0.101 Sum_probs=30.8
Q ss_pred HHHHHHHHHhCCCC--CCCccEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 017814 166 FDTLDKLFARTDIS--PSEIDVLVVNVSLFSPAPSLTSRIINRYNLRN 211 (365)
Q Consensus 166 ~~A~~~aL~~agi~--p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~ 211 (365)
..|+++|++++|++ ++|||.+-+.- .......+..+.||+.+
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~D----~Ft~~~l~~~e~lG~~~ 302 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVDD----RYSYKELQHIEALRLSE 302 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEec----CChHHHHHHHHHcCCCC
Confidence 37999999999997 69999998751 23334455667777755
No 252
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=51.26 E-value=35 Score=34.15 Aligned_cols=48 Identities=19% Similarity=0.275 Sum_probs=33.7
Q ss_pred HHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC
Q 017814 167 DTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG 220 (365)
Q Consensus 167 ~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~ 220 (365)
-|+.++|+.+|+..+|||..=.|- ..-+-...-.++||+.+ ...+.+|
T Consensus 324 vAIp~alk~aGL~v~did~FEINE----AFAsQ~~yc~~KL~ld~--ekVN~~G 371 (435)
T KOG1389|consen 324 VAIPKALKAAGLEVDDIDLFEINE----AFASQALYCRNKLGLDP--EKVNVNG 371 (435)
T ss_pred hhhHHHHHHcCCcccccceeehhH----HHHHHHHHHHHHhCCCH--HHcCCCC
Confidence 478889999999999999876552 23344556778999876 3444444
No 253
>PLN03172 chalcone synthase family protein; Provisional
Probab=51.09 E-value=41 Score=34.23 Aligned_cols=70 Identities=13% Similarity=0.221 Sum_probs=46.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceE-----E-EecCCccchHHHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA-----F-NLSGMGCSASVVAVDLV 233 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~-----~-~l~~mGCsgg~~AL~lA 233 (365)
.+.+-..+.++++|++.|++..|||..++. ...+..-..+.++||++++... + +.++|+.++-..+|+..
T Consensus 274 ~~~~~i~~~~~~~L~~~gl~~~di~~~~~H----qgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (393)
T PLN03172 274 LISKNIEKSLVEAFAPIGINDWNSIFWIAH----PGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEM 349 (393)
T ss_pred HHHHHHHHHHHHHhhhcCCCccccceEEec----CCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 344555567778899999999999997763 2355666778999999875443 2 23444555555566544
No 254
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=50.74 E-value=82 Score=34.01 Aligned_cols=68 Identities=7% Similarity=0.070 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHH
Q 017814 160 EMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVD 231 (365)
Q Consensus 160 ~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~ 231 (365)
...+=..+.++++|+++|+.++|||.|+++.. ....|.....+.+.+|..+ . .+++..-|.+-..|+.
T Consensus 306 ~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGG-ssriP~v~~~l~~~fg~~~-~--~~~npdeaVA~GAAi~ 373 (616)
T PRK05183 306 PLVKRTLLACRRALRDAGVEADEVKEVVMVGG-STRVPLVREAVGEFFGRTP-L--TSIDPDKVVAIGAAIQ 373 (616)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCEEEEECC-cccChHHHHHHHHHhccCc-C--cCCCchHHHHHHHHHH
Confidence 33344455678999999999999999998642 2468999999999998654 2 2445533444333333
No 255
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=48.23 E-value=1e+02 Score=33.10 Aligned_cols=52 Identities=10% Similarity=0.099 Sum_probs=40.2
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRN 211 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~ 211 (365)
+...+=..+.++++|+++|++++|||.|+++. +....|..-.++.+.+|..+
T Consensus 289 ~~ll~~i~~~i~~~L~~a~~~~~~id~ViLvG-GssriP~V~~~l~~~f~~~~ 340 (599)
T TIGR01991 289 QPLVQKTLSICRRALRDAGLSVEEIKGVVLVG-GSTRMPLVRRAVAELFGQEP 340 (599)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhCCEEEEEC-CcCCChHHHHHHHHHhCCCC
Confidence 33344455677899999999999999999863 23469999999999998543
No 256
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=48.15 E-value=51 Score=33.85 Aligned_cols=25 Identities=4% Similarity=0.110 Sum_probs=22.2
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVN 189 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ 189 (365)
...|+++|++++|++++|||.+=+.
T Consensus 311 ~~~a~~~al~~AGl~~~DiD~~Ei~ 335 (428)
T PRK08963 311 PAYATPLALERAGLTLADLTLIDMH 335 (428)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEc
Confidence 4578999999999999999998774
No 257
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=48.13 E-value=64 Score=35.22 Aligned_cols=64 Identities=9% Similarity=0.056 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHH
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVD 231 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~ 231 (365)
=....++++|+++|++++|||.|+++.. ....|..-.+|.+.+|..+ . .+++..-|.+-..|+.
T Consensus 335 r~~~~v~~~L~~a~~~~~dId~VvLVGG-ssriP~V~~~l~~~fg~~~-~--~~~nPdeaVA~GAAi~ 398 (657)
T PTZ00186 335 RSIAPCKQCMKDAGVELKEINDVVLVGG-MTRMPKVVEEVKKFFQKDP-F--RGVNPDEAVALGAATL 398 (657)
T ss_pred HHHHHHHHHHHHcCCChhhCCEEEEECC-cccChHHHHHHHHHhCCCc-c--ccCCCchHHHHhHHHH
Confidence 3445678899999999999999998632 2369999999999999644 2 3455544555444444
No 258
>PRK13411 molecular chaperone DnaK; Provisional
Probab=47.95 E-value=43 Score=36.42 Aligned_cols=68 Identities=12% Similarity=0.184 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHH
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVD 231 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~ 231 (365)
..+=..+.++++|+++|++++|||.|+++. +....|.+-..|.+.+|-.. ....++..-|.+-..|+.
T Consensus 306 l~~~~~~~i~~~L~~a~~~~~~id~ViLvG-GssriP~v~~~l~~~f~~~~--~~~~~npdeaVA~GAAi~ 373 (653)
T PRK13411 306 LVEATIEPMQQALKDAGLKPEDIDRVILVG-GSTRIPAVQEAIQKFFGGKQ--PDRSVNPDEAVALGAAIQ 373 (653)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCcEEEEEC-CCCCcchHHHHHHHHcCCcC--cCCCCCchHHHHHHHHHH
Confidence 334445677899999999999999999863 23468999999999987332 222344434444344443
No 259
>PLN03184 chloroplast Hsp70; Provisional
Probab=46.87 E-value=59 Score=35.55 Aligned_cols=70 Identities=11% Similarity=0.091 Sum_probs=48.4
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHH
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDL 232 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~l 232 (365)
++..+-..+.++++|+++|++++|||.|+++..+ ...|..-.+|.+.+|..+ ...++..-|.+-..|+..
T Consensus 342 ~~l~~r~~~~i~~~L~~a~~~~~dId~ViLvGGs-sriP~V~~~i~~~fg~~~---~~~~npdeaVA~GAAi~a 411 (673)
T PLN03184 342 SDLLDRCKTPVENALRDAKLSFKDIDEVILVGGS-TRIPAVQELVKKLTGKDP---NVTVNPDEVVALGAAVQA 411 (673)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhHccEEEEECCc-cccHHHHHHHHHHhCCCc---ccccCcchHHHHHHHHHH
Confidence 3334445566888999999999999999986422 368999999999998543 344555445544444443
No 260
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=46.18 E-value=70 Score=32.94 Aligned_cols=26 Identities=15% Similarity=0.293 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEe
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVN 189 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~ 189 (365)
....|+++|++++|++|+|||.+=++
T Consensus 310 ~~~~a~~~a~~~AGl~~~Did~~Ei~ 335 (427)
T PRK09268 310 APAYAVPRLLARNGLTLQDFDFYEIH 335 (427)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 44569999999999999999999874
No 261
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=45.62 E-value=59 Score=35.05 Aligned_cols=69 Identities=12% Similarity=0.143 Sum_probs=48.2
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHH
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVD 231 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~ 231 (365)
+...+=..+.++++|+++|++++|||.|+++.. ....|.+-..+.+.+|... ..+++..-|.+-..|+.
T Consensus 303 ~~l~~~~~~~i~~~l~~a~~~~~~id~ViLvGG-ssriP~v~~~l~~~fg~~~---~~~~npdeava~GAa~~ 371 (627)
T PRK00290 303 EDLVERTIEPCKQALKDAGLSVSDIDEVILVGG-STRMPAVQELVKEFFGKEP---NKGVNPDEVVAIGAAIQ 371 (627)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhhCcEEEEECC-cCCChHHHHHHHHHhCCCC---CcCcCChHHHHHhHHHH
Confidence 334444556678999999999999999998642 2369999999999998543 23444545555444544
No 262
>PRK00768 nadE NAD synthetase; Reviewed
Probab=45.48 E-value=3e+02 Score=26.75 Aligned_cols=73 Identities=18% Similarity=0.200 Sum_probs=42.2
Q ss_pred CcHHHHHHHHcCCCCCceEEEecCCccchHHHHHH--------HHHHHH-----------HcccCCeEEEEEeccCCCCC
Q 017814 197 PSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVD--------LVQQLF-----------RTYKNKLAIVVSTESMGPNW 257 (365)
Q Consensus 197 Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~--------lA~~ll-----------~ag~~~~aLVV~~E~~S~~~ 257 (365)
...+..+++.+|+.. ...+++.. ...+....+. ++.+-+ -++ ....||+++.+.|-.
T Consensus 89 ~~da~~la~~lgi~~-~~~i~I~~-~~~~~~~~l~~~~~~~~~~a~~NiqARlRm~~Ly~~An-~~~~lvlgT~N~sE~- 164 (268)
T PRK00768 89 EDDAQDALAFIQPDR-VLTVNIKP-AVDASVAALEAAGIELSDFVKGNIKARERMIAQYAIAG-ATGGLVVGTDHAAEA- 164 (268)
T ss_pred HHHHHHHHHhcCCCe-eEEEECHH-HHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHc-cCCCEEEcCCcccHH-
Confidence 456778999999843 57778776 5555443332 111111 122 234688888776621
Q ss_pred cCCCCcchhhh-hhhccCCeEEEEE
Q 017814 258 YCGREKSMMLS-NILFRSGGCSMLL 281 (365)
Q Consensus 258 ~~~~dr~~lv~-~~LFgDGAAAvlL 281 (365)
+++ .+.+|||++.+-.
T Consensus 165 --------~~Gy~TkyGD~~~d~~p 181 (268)
T PRK00768 165 --------VTGFFTKFGDGGADILP 181 (268)
T ss_pred --------HhCceeccCCccccchh
Confidence 111 5678999977643
No 263
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=45.41 E-value=50 Score=33.87 Aligned_cols=25 Identities=16% Similarity=0.341 Sum_probs=22.5
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVN 189 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ 189 (365)
...|+++|++++|++|+|||.+=++
T Consensus 309 ~~~a~~~al~~aGl~~~did~~ei~ 333 (426)
T PRK08170 309 PVHAATPLLQRHGLTLEDLDLWEIN 333 (426)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEec
Confidence 4579999999999999999998874
No 264
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=44.65 E-value=74 Score=32.14 Aligned_cols=45 Identities=20% Similarity=0.245 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHhCCCC--CCCccEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 017814 163 EIIFDTLDKLFARTDIS--PSEIDVLVVNVSLFSPAPSLTSRIINRYNLRN 211 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~--p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~ 211 (365)
.....|+++|++++|++ ++|||.+=+.. ..+....+..+.||+.+
T Consensus 255 ~~~~~a~~~a~~~Agi~~p~~Did~~el~d----~F~~~~~~~~e~lGl~~ 301 (386)
T PRK08313 255 QAGRDAAAALWKAAGITDPRDEIDVAEIYV----PFSWFEPMWLENLGFAP 301 (386)
T ss_pred HHHHHHHHHHHHHcCCCCChhhCCEEEecc----CChHHHHHHHHHcCCCC
Confidence 34557999999999997 69999876631 23344455567777765
No 265
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=44.42 E-value=27 Score=35.55 Aligned_cols=25 Identities=20% Similarity=0.320 Sum_probs=22.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEe
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVN 189 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ 189 (365)
...|+++||+++|++|+|||.+=++
T Consensus 292 ~~~a~~~Al~~AGl~p~DID~~ei~ 316 (392)
T PRK06633 292 PVPASQKALSKAGWSVNDLEVIEVN 316 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehh
Confidence 4678999999999999999998753
No 266
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=43.97 E-value=60 Score=35.28 Aligned_cols=65 Identities=14% Similarity=0.173 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHH
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDL 232 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~l 232 (365)
..+.++++|+++|++++|||.|+++.. ....|..-.+|.+.+|-.. ...+++..-|.+-..|+..
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGG-ssriP~v~~~i~~~f~~~~--~~~~~npdeaVA~GAa~~a 379 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGG-STRIPKVQSLIKDFFNGKE--PCKSINPDEAVAYGAAVQA 379 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECC-CCCChhHHHHHHHHhCCCC--CCCCCCcchHHhhhhhhhH
Confidence 445678999999999999999998632 2468999999999987432 2334444445554444443
No 267
>PTZ00400 DnaK-type molecular chaperone; Provisional
Probab=42.81 E-value=53 Score=35.78 Aligned_cols=63 Identities=8% Similarity=0.143 Sum_probs=44.0
Q ss_pred HHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHH
Q 017814 165 IFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVD 231 (365)
Q Consensus 165 a~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~ 231 (365)
..+.++++|+++|++++|||.|+++. +....|.+-.++.+.+|... ..+++..-|.+-..|+.
T Consensus 350 ~~~~i~~~L~~a~~~~~~i~~ViLvG-GssriP~v~~~l~~~f~~~~---~~~~npdeaVA~GAAi~ 412 (663)
T PTZ00400 350 TIEPCEKCIKDAGVKKDELNDVILVG-GMTRMPKVSETVKKIFGKEP---SKGVNPDEAVAMGAAIQ 412 (663)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEEC-CccCChHHHHHHHHHhCCCc---ccCCCCccceeeccHHH
Confidence 34567899999999999999999863 22468999999999998543 23344434444344444
No 268
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=42.54 E-value=29 Score=35.25 Aligned_cols=46 Identities=13% Similarity=0.151 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEE-eecCCCCCCcHHHHHHHHcC
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVV-NVSLFSPAPSLTSRIINRYN 208 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv-~ss~~~~~Ps~a~~v~~~LG 208 (365)
.=+..|.+.||+++|+.|+|||.|=- ++|+....-.-+..|.+-++
T Consensus 301 ~Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~ 347 (440)
T KOG1394|consen 301 AGAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFG 347 (440)
T ss_pred chHHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhc
Confidence 45678899999999999999999875 55543222222334545554
No 269
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=42.44 E-value=77 Score=32.17 Aligned_cols=43 Identities=12% Similarity=0.077 Sum_probs=31.8
Q ss_pred HHHHHHHHHHhCCCC--CCCccEEEEeecCCCCCCcHHHHHHHHcCCCC
Q 017814 165 IFDTLDKLFARTDIS--PSEIDVLVVNVSLFSPAPSLTSRIINRYNLRN 211 (365)
Q Consensus 165 a~~A~~~aL~~agi~--p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~ 211 (365)
...|+++|++++|++ ++|||.+=+. .......-...+.||+.+
T Consensus 268 ~~~aa~~a~~~AGl~~~~~Did~~Ei~----D~Fs~~~l~~~e~lGl~~ 312 (398)
T PRK06157 268 TRIAARKAYREAGITDPREELSMAEVH----DCFSITELVTMEDLGLSE 312 (398)
T ss_pred HHHHHHHHHHHcCCCCchhcCCEEEEe----cCChHHHHHHHHHcCCCC
Confidence 457999999999997 7999998764 123344555667888765
No 270
>PRK12404 stage V sporulation protein AD; Provisional
Probab=42.41 E-value=87 Score=31.41 Aligned_cols=89 Identities=18% Similarity=0.256 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCC------C--ceEEE------ecCCcc--chH
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRN------D--IKAFN------LSGMGC--SAS 226 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~------~--v~~~~------l~~mGC--sgg 226 (365)
.-|+..+.+=|++.|.+|+|=|.+|.. ..+.-.-.+...+..+-|+.- | ..-|| -+|.|| |+-
T Consensus 206 PAA~dti~~h~~d~~~~~~~yDlI~TG-DLg~vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~ 284 (334)
T PRK12404 206 PAAVDTIEAHLRDRQIDASYYDLIVTG-DLGHVGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPGCSAT 284 (334)
T ss_pred HHHHHHHHHHHHHhCCChhhccEEEEc-chHHHHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccchHHH
Confidence 445667778899999999999998873 111122234444555545432 0 12232 223344 332
Q ss_pred HHHHHHHHHHHHcccCCeEEEEEeccC
Q 017814 227 VVAVDLVQQLFRTYKNKLAIVVSTESM 253 (365)
Q Consensus 227 ~~AL~lA~~ll~ag~~~~aLVV~~E~~ 253 (365)
+.. -.-...++.|..+++|+|++-..
T Consensus 285 v~~-g~~~~~~~~g~~~rvL~v~TGAL 310 (334)
T PRK12404 285 VTY-GHLLNRMKRGELKRILVVATGAL 310 (334)
T ss_pred HHH-HHHHHHHhcCCceEEEEEEchhh
Confidence 222 22334456788999999987653
No 271
>PLN02854 3-ketoacyl-CoA synthase
Probab=41.35 E-value=1e+02 Score=32.82 Aligned_cols=42 Identities=5% Similarity=0.250 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhCCCCC------CCccEEEEeecCCCCCCcHHHHHHHHcCCC
Q 017814 165 IFDTLDKLFARTDISP------SEIDVLVVNVSLFSPAPSLTSRIINRYNLR 210 (365)
Q Consensus 165 a~~A~~~aL~~agi~p------~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~ 210 (365)
+...+++.|.++|+++ +|||+.+.. ......-..++++||++
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iH----qggr~IId~v~k~LgL~ 434 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIH----AGGRAVLDELQKNLQLS 434 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEEC----CCCHHHHHHHHHHcCCC
Confidence 5667888999999987 689998873 13344556789999997
No 272
>PF09663 Amido_AtzD_TrzD: Amidohydrolase ring-opening protein (Amido_AtzD_TrzD); InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid [].; GO: 0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
Probab=39.35 E-value=98 Score=31.22 Aligned_cols=74 Identities=14% Similarity=0.102 Sum_probs=45.2
Q ss_pred hhhHHHHHHHHHHHHHHhCCC-CCCCccEEEEeecCCCCCCcHHHHHH-HHcCCCCCceEEEecCCccchHHHHHHHHHH
Q 017814 158 FSEMDEIIFDTLDKLFARTDI-SPSEIDVLVVNVSLFSPAPSLTSRII-NRYNLRNDIKAFNLSGMGCSASVVAVDLVQQ 235 (365)
Q Consensus 158 ~e~a~~La~~A~~~aL~~agi-~p~dID~LIv~ss~~~~~Ps~a~~v~-~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ 235 (365)
+....+...+|+++|++++|+ +|.||-.|-+=| |.++....-- +.=|-+. +..-....|+=|-|..||-.|-.
T Consensus 127 r~aqV~~vA~aV~~aM~~AGI~dpaDVH~VQvKc----PLLT~~~i~~A~~RG~~~-~t~dt~~SM~~SrgASALGvAvA 201 (365)
T PF09663_consen 127 RMAQVEEVAAAVRAAMADAGITDPADVHFVQVKC----PLLTSERIADAKARGKTV-ATEDTYESMAYSRGASALGVAVA 201 (365)
T ss_pred cHHHHHHHHHHHHHHHHHcCCCChhheeeEEecC----CcCCHHHHHHHHhCCCce-eecccccccccccchhHHHHHHH
Confidence 334567778999999999999 889986655533 4444333222 2223332 33334556666667777776655
Q ss_pred H
Q 017814 236 L 236 (365)
Q Consensus 236 l 236 (365)
+
T Consensus 202 L 202 (365)
T PF09663_consen 202 L 202 (365)
T ss_pred h
Confidence 4
No 273
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=37.66 E-value=44 Score=33.95 Aligned_cols=42 Identities=10% Similarity=0.032 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCC
Q 017814 164 IIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNL 209 (365)
Q Consensus 164 La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL 209 (365)
....|+++|++++|++|+|||.+=+.. ..+....+..+.||+
T Consensus 256 ~~~~aa~~a~~~AGi~~~did~~elyD----~Fs~~~~~~~E~lGl 297 (388)
T PRK08142 256 GAAWSGPAAFAEAGVTPADIKYASIYD----SFTITVLMQLEDLGF 297 (388)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEec----cchHHHHHHHHHcCC
Confidence 345799999999999999999876531 233344455577776
No 274
>PRK08304 stage V sporulation protein AD; Validated
Probab=37.52 E-value=91 Score=31.33 Aligned_cols=89 Identities=22% Similarity=0.293 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCC-----C--ceEEEe-------cCC--ccchH
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRN-----D--IKAFNL-------SGM--GCSAS 226 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~-----~--v~~~~l-------~~m--GCsgg 226 (365)
.-|+..+.+=|+++|.+|+|=|.+|..- .+.-.-.+...+..+-|+.- | ...||. +|. |||+-
T Consensus 208 pAa~dti~~h~~d~~~~~~~yDli~tGD-lg~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~ 286 (337)
T PRK08304 208 PAAADTIQQHFKDTGRSPEDYDLIVTGD-LGRVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAV 286 (337)
T ss_pred HHHHHHHHHHHHHcCCChhhccEEEEcc-hHHHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHH
Confidence 3456677788999999999999988731 11112233344444444321 0 234441 222 33443
Q ss_pred HHHHHHHHHHHHcccCCeEEEEEeccC
Q 017814 227 VVAVDLVQQLFRTYKNKLAIVVSTESM 253 (365)
Q Consensus 227 ~~AL~lA~~ll~ag~~~~aLVV~~E~~ 253 (365)
+..=. -...++.+..+++|+|++-..
T Consensus 287 v~~~~-~~~~~~~g~~~rvl~v~tGaL 312 (337)
T PRK08304 287 VTYGY-LLKELQKGKLKRVLVVATGAL 312 (337)
T ss_pred HHHHH-HHHHHhcCCceEEEEEEchhh
Confidence 32222 234456688899999987653
No 275
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=34.35 E-value=60 Score=41.08 Aligned_cols=75 Identities=7% Similarity=0.096 Sum_probs=49.8
Q ss_pred HHHHHHHHHhCCCCCCCccEEEE-eecCCCCCCcHHHHHHHHcCCCC----Cc----eEEEecCCccchHHHHHHHHHHH
Q 017814 166 FDTLDKLFARTDISPSEIDVLVV-NVSLFSPAPSLTSRIINRYNLRN----DI----KAFNLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 166 ~~A~~~aL~~agi~p~dID~LIv-~ss~~~~~Ps~a~~v~~~LGL~~----~v----~~~~l~~mGCsgg~~AL~lA~~l 236 (365)
.+++++|++++|++|+|||+|-. .+.+....|.=..-+.+-+|-.. .+ .--+++.+.+++|+.++--+.-.
T Consensus 318 ~~~i~~Al~~Agi~p~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~la 397 (2582)
T TIGR02813 318 AKALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLA 397 (2582)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHH
Confidence 68999999999999999998876 33333334443444555554221 01 12356666788888888877777
Q ss_pred HHcc
Q 017814 237 FRTY 240 (365)
Q Consensus 237 l~ag 240 (365)
++.+
T Consensus 398 l~~~ 401 (2582)
T TIGR02813 398 LHHK 401 (2582)
T ss_pred HhcC
Confidence 7654
No 276
>PLN03168 chalcone synthase; Provisional
Probab=33.32 E-value=1.2e+02 Score=30.77 Aligned_cols=68 Identities=12% Similarity=0.169 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceE-----E-EecCCccchHHHHHHHH
Q 017814 162 DEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKA-----F-NLSGMGCSASVVAVDLV 233 (365)
Q Consensus 162 ~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~-----~-~l~~mGCsgg~~AL~lA 233 (365)
..-....++++|++.|....|++..++. ...+..-..+.++||++++... + +.++|+.++-..+|+.+
T Consensus 275 ~~~~~~~l~~~l~~~~~~~~d~~~~v~H----qgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~ 348 (389)
T PLN03168 275 SKNIEKFLNEARKCVGSPDWNEMFWAVH----PGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQI 348 (389)
T ss_pred HHHHHHHHHHHHHhcCCCccccceEEec----CCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHH
Confidence 3344555566677777776777765542 2345566778999999876543 2 34454555555566554
No 277
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=33.14 E-value=54 Score=31.99 Aligned_cols=49 Identities=20% Similarity=0.390 Sum_probs=34.7
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecC
Q 017814 166 FDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSG 220 (365)
Q Consensus 166 ~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~ 220 (365)
+-|++.+|+++|+..+|||.+=+|-. ..|. .-.+++.|+++ +.-.+++|
T Consensus 296 vPAI~~vLKksGlkl~DiDl~EvNEA---FApQ-~LAv~r~L~ld--~sKlNVNG 344 (396)
T KOG1391|consen 296 VPAISGVLKKSGLKLKDIDLVEVNEA---FAPQ-YLAVERSLDLD--ISKLNVNG 344 (396)
T ss_pred cHHHHHHHHHcCCcccccceEEechh---hchH-HHHHHHhhCCC--hhhccccC
Confidence 46889999999999999998888631 1222 22366788874 56677777
No 278
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=33.07 E-value=1.5e+02 Score=29.66 Aligned_cols=89 Identities=22% Similarity=0.287 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCC-----C--ceEE------EecCCcc--chHH
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRN-----D--IKAF------NLSGMGC--SASV 227 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~-----~--v~~~------~l~~mGC--sgg~ 227 (365)
.-|+..+.+=|++.|.+|+|=|.+|..- .+.-.-.+...+..+-|+.- | ..-| .-+|.|| |+-+
T Consensus 202 paa~dti~~h~~d~~~~~~~yd~i~tgd-lg~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v 280 (327)
T TIGR02845 202 PAAADTIEAHFKDTGRSVDDYDLIVTGD-LARVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAVV 280 (327)
T ss_pred HHHHHHHHHHHHHcCCChhhccEEEecc-hHHHHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHHH
Confidence 4456777888999999999999988731 11112233334444434311 0 1222 3333344 3322
Q ss_pred HHHHHHHHHHHcccCCeEEEEEeccC
Q 017814 228 VAVDLVQQLFRTYKNKLAIVVSTESM 253 (365)
Q Consensus 228 ~AL~lA~~ll~ag~~~~aLVV~~E~~ 253 (365)
..= .-...++.|..+++|+|++-..
T Consensus 281 ~~~-~~~~~~~~g~~~r~l~v~tgal 305 (327)
T TIGR02845 281 TYG-HILKEMLRGKLKKVLVVATGAL 305 (327)
T ss_pred HHH-HHHHHHhcCcceEEEEEEchhh
Confidence 222 2234456678899999987653
No 279
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=32.40 E-value=44 Score=32.73 Aligned_cols=28 Identities=18% Similarity=0.421 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCccEEEE
Q 017814 161 MDEIIFDTLDKLFARTDISPSEIDVLVV 188 (365)
Q Consensus 161 a~~La~~A~~~aL~~agi~p~dID~LIv 188 (365)
..||...|++++++++|+.|.||+.+=.
T Consensus 270 gfdm~~~aa~~l~aksgltpndvqviel 297 (408)
T KOG1406|consen 270 GFDMTRLAAKRLFAKSGLTPNDVQVIEL 297 (408)
T ss_pred cchHHHHHHHHHHHHcCCCcccceEEEe
Confidence 3589999999999999999999998876
No 280
>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=30.93 E-value=87 Score=31.92 Aligned_cols=34 Identities=18% Similarity=0.334 Sum_probs=30.4
Q ss_pred HhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEe
Q 017814 156 EAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVN 189 (365)
Q Consensus 156 ~~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ 189 (365)
--+|...+|..+.+.+++++++++.+|+|.||=+
T Consensus 60 LtresV~elV~dtl~e~~k~A~l~i~DL~FVVRS 93 (445)
T TIGR03285 60 LTRESVAELVKDTLKESLKKAGLDIDDLDFVVRS 93 (445)
T ss_pred ccHHHHHHHHHHHHHHHHHHcCCChhhccEEEec
Confidence 3578899999999999999999999999998853
No 281
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=30.91 E-value=1.8e+02 Score=29.55 Aligned_cols=24 Identities=21% Similarity=0.066 Sum_probs=21.0
Q ss_pred HHHHHHHHHhCCCCC--CCccEEEEe
Q 017814 166 FDTLDKLFARTDISP--SEIDVLVVN 189 (365)
Q Consensus 166 ~~A~~~aL~~agi~p--~dID~LIv~ 189 (365)
..|+++|++++|+++ +|||.+=+.
T Consensus 265 ~~a~~~a~~~aGi~~p~~diD~~ei~ 290 (392)
T PRK06065 265 EFAARMAYKMAGIERPRKEIDVAEPY 290 (392)
T ss_pred HHHHHHHHHHcCCCCchhhCcEEEec
Confidence 579999999999985 999999874
No 282
>TIGR00114 lumazine-synth 6,7-dimethyl-8-ribityllumazine synthase. Archaeal members of this family are considered putative, although included in the seed and scoring above the trusted cutoff.
Probab=30.39 E-value=23 Score=30.94 Aligned_cols=47 Identities=13% Similarity=0.166 Sum_probs=34.5
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHH
Q 017814 158 FSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINR 206 (365)
Q Consensus 158 ~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~ 206 (365)
-++..+-..+.+.+.|++.|+..++||.+-|- +-+..|-.+..+++.
T Consensus 11 n~~i~~~L~~ga~~~l~~~g~~~~~i~v~~VP--Ga~EiP~a~~~l~~~ 57 (138)
T TIGR00114 11 NRDITDMLLKGAIDALKRLGAEVDNIDVIWVP--GAFELPLAVKKLAET 57 (138)
T ss_pred CHHHHHHHHHHHHHHHHHcCCCccceEEEECC--cHHHHHHHHHHHHhc
Confidence 35566777888899999999998888877552 224577777777754
No 283
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=30.10 E-value=42 Score=33.34 Aligned_cols=88 Identities=22% Similarity=0.293 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCc--------------eEEEecCCccchHHH
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDI--------------KAFNLSGMGCSASVV 228 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v--------------~~~~l~~mGCsgg~~ 228 (365)
.-|+..+.+=|++.|.+|+|-|.||..- .+.-.-.+...+.++-|+.-.- +-+.-+|.|| |..
T Consensus 203 PAA~dTI~~h~~D~g~~p~dYDlIvTGD-Lg~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGGSGc--gCS 279 (329)
T PF07451_consen 203 PAAADTIEQHFKDTGRSPDDYDLIVTGD-LGKVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGGSGC--GCS 279 (329)
T ss_dssp HHHHHHHHHHHHHCT--GGG-SEEEESS--HHHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-EESH--HHH
T ss_pred HHHHHHHHHHHHHhCCChhhcCeEEecc-hHHHHHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCCCCc--chH
Confidence 3356667778899999999999998731 1111123344455555543221 2111222233 333
Q ss_pred HHHHH---HHHHHcccCCeEEEEEeccC
Q 017814 229 AVDLV---QQLFRTYKNKLAIVVSTESM 253 (365)
Q Consensus 229 AL~lA---~~ll~ag~~~~aLVV~~E~~ 253 (365)
|.-+. ...++.|..+++|+|++-..
T Consensus 280 A~V~~g~ll~~l~~g~~krvL~vaTGAL 307 (329)
T PF07451_consen 280 AVVLCGYLLPKLRKGELKRVLFVATGAL 307 (329)
T ss_dssp HHHHHHCHHHHHHTTS-SEEEEEEEEE-
T ss_pred HHHHHHHHHHHHHcCCceEEEEEEchhh
Confidence 33333 34456788999999987643
No 284
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=29.96 E-value=1.3e+02 Score=30.52 Aligned_cols=95 Identities=16% Similarity=0.141 Sum_probs=57.4
Q ss_pred hHHhhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCC----------cHHHHHHHHcCCCC--CceEEEecCC
Q 017814 154 LAEAFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAP----------SLTSRIINRYNLRN--DIKAFNLSGM 221 (365)
Q Consensus 154 ~~~~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~P----------s~a~~v~~~LGL~~--~v~~~~l~~m 221 (365)
+.+.+++-..+-.+|++.++++.++.|+||+.|.+-.-+....| +...+++++.|++. |..+=|+..-
T Consensus 64 ~~~l~~~l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV~H~p~~~~~~t~Qlgd~~~iA~~TGi~~v~dfR~~D~a~G 143 (371)
T COG2377 64 LAELDRALALLHAQAVAALLAEQGLLPRDIRAIGCHGQTVLHRPPGHAPDTVQLGDGPLIAELTGITVVGDFRRRDMAAG 143 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHhCceeecCCccccCCCCCCCCceeecCchHHHHHHhCCccHhhhcccccccC
Confidence 44566777888899999999999999999997776322211111 35678999999875 2233344441
Q ss_pred ccch-HHHHHHHHHHHHHcccCCeEEEEEec
Q 017814 222 GCSA-SVVAVDLVQQLFRTYKNKLAIVVSTE 251 (365)
Q Consensus 222 GCsg-g~~AL~lA~~ll~ag~~~~aLVV~~E 251 (365)
|-.+ -+.|.+.| +.+++..+..|+..-
T Consensus 144 GqGAPLvPA~H~A---l~~~~~~~r~vlNiG 171 (371)
T COG2377 144 GQGAPLVPAFHAA---LARAPRERRAVLNIG 171 (371)
T ss_pred CCCCcchhhhhhH---hhcCCCCCeEEEecc
Confidence 2222 23344433 334444555555433
No 285
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family. Several related four-subunit enzymes may exist in the same species. This model describes a subfamily of beta subunits, representing mostly pyruvate and 2-ketoisovalerate specific enzymes.
Probab=29.22 E-value=2.3e+02 Score=27.76 Aligned_cols=21 Identities=19% Similarity=0.425 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCc
Q 017814 163 EIIFDTLDKLFARTDISPSEI 183 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dI 183 (365)
-....|+.+||++.|++|+|.
T Consensus 10 ~~i~~~~~~a~~~l~~~p~d~ 30 (287)
T TIGR02177 10 FGILSALQRALAELNLDPEQV 30 (287)
T ss_pred hHHHHHHHHHHHHhcCCCCCE
Confidence 356788999999999999873
No 286
>PLN02404 6,7-dimethyl-8-ribityllumazine synthase
Probab=29.11 E-value=27 Score=30.65 Aligned_cols=48 Identities=17% Similarity=0.188 Sum_probs=34.7
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHH
Q 017814 157 AFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINR 206 (365)
Q Consensus 157 ~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~ 206 (365)
|.++..+-..+.+.+.|++.|++.++|+.+-|- +-+..|-.+..+++.
T Consensus 17 fn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VP--Ga~EiP~a~~~l~~s 64 (141)
T PLN02404 17 FNEIITKNLLEGALETFKRYSVKEENIDVVWVP--GSFEIPVVAQRLAKS 64 (141)
T ss_pred CcHHHHHHHHHHHHHHHHHcCCCccceEEEEcC--cHHHHHHHHHHHHhc
Confidence 345667778888888999999998888877662 224577777777653
No 287
>PF05883 Baculo_RING: Baculovirus U-box/Ring-like domain; InterPro: IPR008573 This family consists of several Baculovirus proteins of around 130 residues in length. The function of this family is unknown, but it appears to be related to the U-box and ring finger domain by profile-profile comparison.
Probab=29.11 E-value=40 Score=29.42 Aligned_cols=38 Identities=18% Similarity=0.289 Sum_probs=24.2
Q ss_pred ecchhhhhhhhhhccchhhhhccccCceEEEEeecCccch
Q 017814 7 NRNYMLHKICLIKKFKFDFLRKERQGSLEIFFFSFPPFSL 46 (365)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 46 (365)
|=.-|.|+-|+- ||+ .+.++.--..--.|.|.|||-++
T Consensus 52 nLEkmfc~~C~~-rw~-~~~~rDPfnR~I~y~F~fPf~~~ 89 (134)
T PF05883_consen 52 NLEKMFCADCDK-RWR-RERNRDPFNRNIKYWFNFPFKNL 89 (134)
T ss_pred hHHHHHHHHHHH-HHH-hhccCCCcccceEEEEeCCCCCH
Confidence 445689999974 554 22222222344578999999765
No 288
>PF06924 DUF1281: Protein of unknown function (DUF1281); InterPro: IPR009694 This family consists of several hypothetical enterobacterial proteins of around 170 residues in length. Members of this family are found in Escherichia coli, Salmonella typhimurium and Shigella species. The function of this family is unknown.; PDB: 2IJR_A.
Probab=29.03 E-value=55 Score=28.48 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=26.0
Q ss_pred CHHHHHHHHhhcccCChhHHHHHHHHHHHhCcceEEe
Q 017814 103 DTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGEETY 139 (365)
Q Consensus 103 ~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~R~~ 139 (365)
-.+..++.+.+...+|++..+.+.+++..|||+.|++
T Consensus 72 AF~~Wl~lL~~~~~Ld~~~~~~i~~l~~QSGi~~~~W 108 (134)
T PF06924_consen 72 AFTQWLGLLQKDVWLDPETCRRIHRLWLQSGIGARRW 108 (134)
T ss_dssp HHHHHHHHHHTT-B-SSHHHHHHHHHHHTT-GGG--T
T ss_pred cHHHHHHHHHhCCcCCHHHHHHHHHHHHHcCcccccc
Confidence 3455566667777789999999999999999999987
No 289
>PF00012 HSP70: Hsp70 protein; InterPro: IPR013126 Heat shock proteins, Hsp70 chaperones help to fold many proteins. Hsp70 assisted folding involves repeated cycles of substrate binding and release. Hsp70 activity is ATP dependent. Hsp70 proteins are made up of two regions: the amino terminus is the ATPase domain and the carboxyl terminus is the substrate binding region []. Hsp70 proteins have an average molecular weight of 70 kDa [, , ]. In most species,there are many proteins that belong to the hsp70 family. Some of these are only expressed under stress conditions (strictly inducible), while some are present in cells under normal growth conditions and are not heat-inducible (constitutive or cognate) [, ]. Hsp70 proteins can be found in different cellular compartments(nuclear, cytosolic, mitochondrial, endoplasmic reticulum, for example).; PDB: 2P32_D 3D2F_A 2QXL_A 3D2E_C 3C7N_A 3FE1_C 4ANI_C 2V7Y_A 2KHO_A 3DPQ_B ....
Probab=26.93 E-value=96 Score=32.70 Aligned_cols=69 Identities=13% Similarity=0.182 Sum_probs=43.8
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHH
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVD 231 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~ 231 (365)
++..+=..+.++++|+++++.+++||.|+++.. ....|.+-..|.+.+| .. ....++..-|.+-..|+.
T Consensus 305 ~~~~~~~~~~i~~~l~~~~~~~~~i~~V~lvGG-~sr~p~v~~~l~~~f~-~~--~~~~~~p~~aVA~GAa~~ 373 (602)
T PF00012_consen 305 EPLLERIIEPIEKALKDAGLKKEDIDSVLLVGG-SSRIPYVQEALKELFG-KK--ISKSVNPDEAVARGAALY 373 (602)
T ss_dssp HHHHHHTHHHHHHHHHHTT--GGGESEEEEESG-GGGSHHHHHHHHHHTT-SE--EB-SS-TTTHHHHHHHHH
T ss_pred cccccccccccccccccccccccccceeEEecC-cccchhhhhhhhhccc-cc--cccccccccccccccccc
Confidence 333444467788999999999999999998642 3468999999999999 32 334455534433333443
No 290
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=25.98 E-value=2.3e+02 Score=28.61 Aligned_cols=76 Identities=9% Similarity=0.024 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEe-ecCCCCCCcHHHHHHHHcCCCCC-ceEE----EecCCccchHHHHHHHHHHH
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYNLRND-IKAF----NLSGMGCSASVVAVDLVQQL 236 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~-ss~~~~~Ps~a~~v~~~LGL~~~-v~~~----~l~~mGCsgg~~AL~lA~~l 236 (365)
+-..+|+++||+++|+ +|||++-.. +.+....+.-...+.+-+|-+.+ .+.. .++....++|+..+-.+...
T Consensus 274 ~~~~~a~~~al~~ag~--~~i~~v~~hgtgt~~~D~~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~ 351 (406)
T PRK08439 274 EGPLRAMKAALEMAGN--PKIDYINAHGTSTPYNDKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMA 351 (406)
T ss_pred HHHHHHHHHHHHHcCC--CccCEEEccCCcCCCCCHHHHHHHHHHhcccCCCCeEECcccccccCchhhhHHHHHHHHHH
Confidence 3456899999999998 789988763 32322333333445555553211 1111 13333445555555555555
Q ss_pred HHcc
Q 017814 237 FRTY 240 (365)
Q Consensus 237 l~ag 240 (365)
++.+
T Consensus 352 l~~~ 355 (406)
T PRK08439 352 MRDG 355 (406)
T ss_pred HhCC
Confidence 5544
No 291
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=25.58 E-value=1.9e+02 Score=28.58 Aligned_cols=51 Identities=18% Similarity=0.228 Sum_probs=36.8
Q ss_pred HHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHHHcccCCeEEEEEeccCC
Q 017814 202 RIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLFRTYKNKLAIVVSTESMG 254 (365)
Q Consensus 202 ~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~~~aLVV~~E~~S 254 (365)
-+..-.+|+-.+-++-++. |||||..|+-.|....... +..-=|++-|-|+
T Consensus 180 nL~em~~LkvPiI~iVIGE-GgSGGALAi~vad~V~mle-~s~ySVisPEG~A 230 (317)
T COG0825 180 NLREMARLKVPIISIVIGE-GGSGGALAIGVADRVLMLE-NSTYSVISPEGCA 230 (317)
T ss_pred HHHHHhCCCCCEEEEEecC-CCchhhHHhhHHHHHHHHH-hceeeecChhhhh
Confidence 3455557776578888888 9999999999998877653 4455556666654
No 292
>TIGR02714 amido_AtzD_TrzD ring-opening amidohydrolases. Members of this family are are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (EC 3.5.2.15) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for EC 3.5.2.1 (barbiturate + water = malonate + urea) but rather catalyzes the ring-opening of barbituric acid to ureidomalonic acid (see Soong, et al., PubMed:11485332).
Probab=25.40 E-value=1.7e+02 Score=29.53 Aligned_cols=32 Identities=9% Similarity=0.182 Sum_probs=24.8
Q ss_pred hhhHHHHHHHHHHHHHHhCCC-CCCCccEEEEe
Q 017814 158 FSEMDEIIFDTLDKLFARTDI-SPSEIDVLVVN 189 (365)
Q Consensus 158 ~e~a~~La~~A~~~aL~~agi-~p~dID~LIv~ 189 (365)
+....+...+|+++|++++|+ +|.|+-.|=+=
T Consensus 128 r~aqV~~vA~aV~~AM~~AGI~dpaDVH~VQvK 160 (366)
T TIGR02714 128 RTAQITETAAAVKRAMRDAGIADPADVHFVQVK 160 (366)
T ss_pred cHHHHHHHHHHHHHHHHHcCCCChhHeeEEEec
Confidence 344567888999999999999 78887555553
No 293
>PRK12419 riboflavin synthase subunit beta; Provisional
Probab=24.37 E-value=35 Score=30.56 Aligned_cols=48 Identities=10% Similarity=0.029 Sum_probs=34.5
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHH
Q 017814 157 AFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINR 206 (365)
Q Consensus 157 ~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~ 206 (365)
|-++..+...+.+.+.|++.|++.++|+.+-|- +-+..|-.+..+++.
T Consensus 20 fn~~It~~Ll~gA~~~l~~~G~~~~~i~v~~VP--GA~EiP~~a~~l~~~ 67 (158)
T PRK12419 20 WHADIVDQARKGFVAEIAARGGAASQVDIFDVP--GAFEIPLHAQTLAKT 67 (158)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCccceEEEECC--cHHHHHHHHHHHHhc
Confidence 456777888888899999999988888665442 224577777777653
No 294
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=23.24 E-value=86 Score=26.61 Aligned_cols=20 Identities=10% Similarity=0.045 Sum_probs=9.4
Q ss_pred hhcCCCCeEEEEEEEEcCCC
Q 017814 78 LQKRGQCCYMLAYECYKPCD 97 (365)
Q Consensus 78 ~~~r~~~v~I~~~~~~~P~~ 97 (365)
.|+|....=|-+.+...|+.
T Consensus 25 RR~r~G~~P~~gt~w~~pp~ 44 (130)
T PF12273_consen 25 RRRRRGLQPIYGTRWMAPPS 44 (130)
T ss_pred HHhhcCCCCcCCceecCCCC
Confidence 33443333355555555544
No 295
>PRK01433 hscA chaperone protein HscA; Provisional
Probab=23.02 E-value=3.2e+02 Score=29.46 Aligned_cols=67 Identities=7% Similarity=0.103 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHH
Q 017814 159 SEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVD 231 (365)
Q Consensus 159 e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~ 231 (365)
+...+=....++++|++++ ++|||.|+++..+ ...|..-.++.+.+|... ..+++..-|.+-..|+.
T Consensus 287 ~~l~~~~~~~i~~~L~~a~--~~~Id~ViLvGGs-sriP~v~~~l~~~f~~~~---~~~~npdeaVA~GAAi~ 353 (595)
T PRK01433 287 LPLVERTINIAQECLEQAG--NPNIDGVILVGGA-TRIPLIKDELYKAFKVDI---LSDIDPDKAVVWGAALQ 353 (595)
T ss_pred HHHHHHHHHHHHHHHhhcC--cccCcEEEEECCc-ccChhHHHHHHHHhCCCc---eecCCchHHHHHHHHHH
Confidence 3334445566788999998 7899999986422 368999999999998643 23455534444444444
No 296
>PLN02666 5-oxoprolinase
Probab=23.01 E-value=1.7e+02 Score=34.64 Aligned_cols=75 Identities=9% Similarity=0.142 Sum_probs=51.4
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchHHHHHHHHHHHH
Q 017814 158 FSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSASVVAVDLVQQLF 237 (365)
Q Consensus 158 ~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg~~AL~lA~~ll 237 (365)
.+-+.+-+.+|++....+-|.+|+|-.++.+. -..|..+..++++||++. +..-...+..|+=|+..-++.+++.
T Consensus 464 ~~ia~~~m~~air~i~~~~G~dpr~~~l~afG----Gagp~ha~~lA~~lgi~~-vivP~~~gv~sA~G~~~ad~~~d~~ 538 (1275)
T PLN02666 464 VRVANEAMCRPIRQLTEMKGYETANHALACFG----GAGPQHACAIARALGMSE-VFVHRYCGILSAYGMGLADVVAEAQ 538 (1275)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCceEEEec----CcHHHHHHHHHHHcCCCE-EEeCCCccHHHHHHHHhhhhhhhhh
Confidence 45566777888888888899999997665552 368899999999999985 4443344444554544444444443
No 297
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=22.94 E-value=59 Score=24.79 Aligned_cols=37 Identities=14% Similarity=0.108 Sum_probs=23.9
Q ss_pred CCcCHHHHHHHHhhcccCChhHHHHHHHHHHHhCcce
Q 017814 100 RRLDTESCARVVWRNKKLGLEEYRFLLKNMVSSGIGE 136 (365)
Q Consensus 100 ~~v~~ee~~~~~~~~~~~~~~~~~~~~ri~~~sGI~~ 136 (365)
+.|.-+.+...+......+++++..+.+++++.||.+
T Consensus 11 ~~V~g~~ie~~~~~~~~~~~e~~~rf~~~L~~~Gv~~ 47 (69)
T PF09269_consen 11 FVVEGPKIERLVAMTNFDDEESLRRFQRKLKKMGVEK 47 (69)
T ss_dssp EEEE-HHHHHHHTTEEE-TGGGHHHHHHHHHHTTHHH
T ss_pred EEEEChHHHHHHHhcCCCCHHHHHHHHHHHHHCCHHH
Confidence 5577777777776665556777777777777766643
No 298
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=22.79 E-value=1.2e+02 Score=28.00 Aligned_cols=82 Identities=9% Similarity=0.050 Sum_probs=48.0
Q ss_pred HHHHHHHHHhCCCCCCCccEEEEe-ecCCCCCCcHHHHHHHHcC-CC-CCceEEEecCCccchHHHHHHHHHHHHHcccC
Q 017814 166 FDTLDKLFARTDISPSEIDVLVVN-VSLFSPAPSLTSRIINRYN-LR-NDIKAFNLSGMGCSASVVAVDLVQQLFRTYKN 242 (365)
Q Consensus 166 ~~A~~~aL~~agi~p~dID~LIv~-ss~~~~~Ps~a~~v~~~LG-L~-~~v~~~~l~~mGCsgg~~AL~lA~~ll~ag~~ 242 (365)
.+.+.++|+++.-+ ++|..||+. .+++ ..+.-...+.+.+. ++ ...+.+-... +|+++..-|..|.+.+-+.|.
T Consensus 31 ~~~l~~~l~~a~~d-~~ik~vvL~~~s~g-g~~~~~~el~~~i~~~~~~~kpVia~~~-~~~sggy~lasaad~I~a~p~ 107 (222)
T cd07018 31 LRDLLEALEKAAED-DRIKGIVLDLDGLS-GGLAKLEELRQALERFRASGKPVIAYAD-GYSQGQYYLASAADEIYLNPS 107 (222)
T ss_pred HHHHHHHHHHHhcC-CCeEEEEEECCCCC-CCHHHHHHHHHHHHHHHHhCCeEEEEeC-CCCchhhhhhhhCCEEEECCC
Confidence 44566666666544 369999984 3333 24444444554442 22 1245555555 677777777777777766666
Q ss_pred CeEEEEEe
Q 017814 243 KLAIVVST 250 (365)
Q Consensus 243 ~~aLVV~~ 250 (365)
..+-.+|.
T Consensus 108 ~~vg~iGv 115 (222)
T cd07018 108 GSVELTGL 115 (222)
T ss_pred ceEEeecc
Confidence 55555554
No 299
>COG4401 AroH Chorismate mutase [Amino acid transport and metabolism]
Probab=22.46 E-value=2e+02 Score=24.40 Aligned_cols=63 Identities=10% Similarity=0.084 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHHcCCCCCceEEEecCCccchH
Q 017814 163 EIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINRYNLRNDIKAFNLSGMGCSAS 226 (365)
Q Consensus 163 ~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~LGL~~~v~~~~l~~mGCsgg 226 (365)
+-..+-.++..++.-.+|+|+--++.+.+.+...--.|..+-..-|... ++.+++..|---|+
T Consensus 22 ~at~eLl~~i~~~N~~~pedv~sv~~svT~Dl~A~FPAka~R~~~gw~~-Vpv~~~Qem~V~gs 84 (125)
T COG4401 22 DATKELLEEIEEENITDPEDVVSVILSVTEDLDAIFPAKAVRELPGWEY-VPVMCMQEMPVPGS 84 (125)
T ss_pred HHHHHHHHHHHHhcCCChhheeeEEEEeccchhhhCcHHHhccCCCCcc-cceeeeeeccCCCC
Confidence 3344445666677788999998888876554322223455556667775 99999988655554
No 300
>PF06716 DUF1201: Protein of unknown function (DUF1201); InterPro: IPR009591 This entry consists of several Beet yellows virus (BYV) putative membrane-binding proteins of around 54 residues in length. The function of this currently unknown.
Probab=22.08 E-value=2.9e+02 Score=19.78 Aligned_cols=28 Identities=25% Similarity=0.406 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 017814 53 FFSFIMALLYLLPLFYIIFHLYKWVLQK 80 (365)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (365)
+-...++|..+.+++...++.+|-|.-+
T Consensus 11 ~~F~~lIC~Fl~~~~~F~~F~~Kqilfr 38 (54)
T PF06716_consen 11 LAFGFLICLFLFCLVVFIWFVYKQILFR 38 (54)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3344567777777766666666665533
No 301
>cd03765 proteasome_beta_bacterial Bacterial proteasome, beta subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming an elongated alpha-beta-beta-alpha cylinder with a central cavity. The proteasome alpha and beta subunits are members of the N-terminal nucleophile (Ntn)-hydrolase superfamily. Their N-terminal threonine residues are exposed as a nucleophile in peptide bond hydrolysis. Mammals have 7 alpha and 7 beta proteasome subunits while archaea have one of each.
Probab=21.97 E-value=1.3e+02 Score=28.45 Aligned_cols=33 Identities=12% Similarity=0.178 Sum_probs=30.0
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCCCCccEEEEee
Q 017814 158 FSEMDEIIFDTLDKLFARTDISPSEIDVLVVNV 190 (365)
Q Consensus 158 ~e~a~~La~~A~~~aL~~agi~p~dID~LIv~s 190 (365)
.|++.+++.+|++.++++-..+++.|+..++.-
T Consensus 167 ~eeai~la~~al~~a~~rd~~sg~~iev~vI~k 199 (236)
T cd03765 167 LEDAAKCALVSMDSTMRSNLSVGPPLDLLVYER 199 (236)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCEEEEEEEC
Confidence 478999999999999999999999999999853
No 302
>COG0054 RibH Riboflavin synthase beta-chain [Coenzyme metabolism]
Probab=21.84 E-value=86 Score=27.94 Aligned_cols=48 Identities=13% Similarity=0.159 Sum_probs=34.3
Q ss_pred hhhhHHHHHHHHHHHHHHhCCCCCCCccEEEEeecCCCCCCcHHHHHHHH
Q 017814 157 AFSEMDEIIFDTLDKLFARTDISPSEIDVLVVNVSLFSPAPSLTSRIINR 206 (365)
Q Consensus 157 ~~e~a~~La~~A~~~aL~~agi~p~dID~LIv~ss~~~~~Ps~a~~v~~~ 206 (365)
|.+...+...+.+.+++++.|.+.++||.+-|- +-+..|-.+..+++.
T Consensus 22 fn~~I~d~ll~gA~~~l~~~G~~~~~i~vv~VP--Ga~EiPl~a~~La~~ 69 (152)
T COG0054 22 FNDDITDALLEGAVDALKRHGADVDNIDVVRVP--GAFEIPLAAKKLART 69 (152)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCcccceEEEeC--CcchhHHHHHHHHhc
Confidence 446677888888899999999888877766652 235678666666654
No 303
>PHA02902 putative IMV membrane protein; Provisional
Probab=21.54 E-value=2.9e+02 Score=21.13 Aligned_cols=20 Identities=15% Similarity=0.448 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHhhh
Q 017814 57 IMALLYLLPLFYIIFHLYKW 76 (365)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~ 76 (365)
++....+..+.+.+|.+||+
T Consensus 7 vi~~v~v~Ivclliya~YrR 26 (70)
T PHA02902 7 VILAVIVIIFCLLIYAAYKR 26 (70)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34445556677888999887
No 304
>PF15086 UPF0542: Uncharacterised protein family UPF0542
Probab=21.02 E-value=1.8e+02 Score=22.74 Aligned_cols=29 Identities=17% Similarity=0.235 Sum_probs=19.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 017814 49 LSYFFFSFIMALLYLLPLFYIIFHLYKWVL 78 (365)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (365)
.-|-++.+++++++=+ |+++.++.|+.++
T Consensus 18 dP~~Fl~~vll~LtPl-fiisa~lSwkLaK 46 (74)
T PF15086_consen 18 DPYEFLTTVLLILTPL-FIISAVLSWKLAK 46 (74)
T ss_pred ChHHHHHHHHHHHhHH-HHHHHHHHHHHHH
Confidence 3466777777666544 6777888877643
No 305
>PF07620 SLEI_Leptospira: SLEI; InterPro: IPR011512 This entry represents a highly conserved sequence motif found at the C-terminal of some hypothetical proteins from Leptospira interrogans.
Probab=21.02 E-value=58 Score=18.10 Aligned_cols=11 Identities=55% Similarity=0.468 Sum_probs=9.0
Q ss_pred hccccCceEEE
Q 017814 27 RKERQGSLEIF 37 (365)
Q Consensus 27 ~~~~~~~~~~~ 37 (365)
|-.|..||||+
T Consensus 3 ~~~rdNsLeIs 13 (16)
T PF07620_consen 3 RWLRDNSLEIS 13 (16)
T ss_pred ccccCCeEEEe
Confidence 56788999997
No 306
>PF13268 DUF4059: Protein of unknown function (DUF4059)
Probab=20.64 E-value=2.5e+02 Score=21.90 Aligned_cols=29 Identities=17% Similarity=0.154 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 017814 54 FSFIMALLYLLPLFYIIFHLYKWVLQKRG 82 (365)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 82 (365)
+-+.+..+.+..++..+|..||+..++++
T Consensus 10 lqgL~ls~i~V~~~~~~wi~~Ra~~~~DK 38 (72)
T PF13268_consen 10 LQGLLLSSILVLLVSGIWILWRALRKKDK 38 (72)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 34444455555567788999988666553
Done!