BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017822
(365 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M9Z2|TPP2_ARATH Probable thylakoidal processing peptidase 2, chloroplastic
OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1
Length = 367
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/380 (55%), Positives = 266/380 (70%), Gaps = 28/380 (7%)
Query: 1 MALRVTVNFSGYVAQNLAHSAGIRFGFSTTSTRSFHECLFRPRVFCHSKKTDL-DPPP-- 57
MA+RVT +S YVA+++A SAG R G T RS E RPR H++ D+ D P
Sbjct: 1 MAIRVTFTYSSYVARSIASSAGTRVG--TGDVRSCFETWVRPRFCGHNQIPDIVDKSPGS 58
Query: 58 -NYQPKANYRC-------NTLAAEIFGDGACNSPILMGLVSLMKSTAGMPGPSATSMGVF 109
+ P + R +T+A EI +G C SP+++G++SLM T P + M
Sbjct: 59 NTWGPSSGPRARPASSMYSTIAREILEEG-CKSPLVLGMISLMNLTGA---PQFSGMTGL 114
Query: 110 GISPFKAASIIPFLQGSKWLPCNEPGTVP-ESDYVDKGGTT--DKIQFSGSENL-NGVSL 165
GISPFK +S+IPFL+GSKW+PC+ P T+ + VD+GG K++ S+ + NG
Sbjct: 115 GISPFKTSSVIPFLRGSKWMPCSIPATLSTDIAEVDRGGKVCDPKVKLELSDKVSNG--- 171
Query: 166 QLKTSGSWLSKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILA 225
W++KLLN+CS+DAKAAFTA+TVS LF+S LAEP+SIPS SM PTLDVGDR++A
Sbjct: 172 ----GNGWVNKLLNICSEDAKAAFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRVIA 227
Query: 226 EKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVA 285
EKVSYFF++PEVSDIVIF+APPIL E G+S DVFIKRIVA+ GD VEV GKLLVN
Sbjct: 228 EKVSYFFRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTV 287
Query: 286 QDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPS 345
Q EDF+LEP+ YEM+P+ VPEGYVFVLGDNRN SFDSHNWGPLPI+NI+GRSVFRYWPPS
Sbjct: 288 QAEDFVLEPIDYEMEPMFVPEGYVFVLGDNRNKSFDSHNWGPLPIKNIIGRSVFRYWPPS 347
Query: 346 RVSDMLDDPYAMKNAAVPIA 365
+VSD++ + AV ++
Sbjct: 348 KVSDIIHHEQVSQKRAVDVS 367
>sp|O04348|TPP1_ARATH Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis
thaliana GN=TPP1 PE=2 SV=2
Length = 340
Score = 380 bits (976), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/368 (56%), Positives = 259/368 (70%), Gaps = 31/368 (8%)
Query: 1 MALRVTVNFSGYVAQNLAHSAGIRFGFSTTSTRSFHECLFRPRVFCHSKKTDLDPPPNYQ 60
MA+R+T +S +VA+NL G R G E L RPR F H K D D P +
Sbjct: 1 MAIRITFTYSTHVARNLV---GTRVGPGGYC----FESLVRPRFFSH--KRDFDRSPRNR 51
Query: 61 PKANYRCNTLAAEIFGDGACNSPILMGLVSLMKSTAGMPGPSATSMGVFGISPFKAASII 120
P + Y ++A E+ G+G+ SP++MGL+S++KST G +++M V G+S FKA+SII
Sbjct: 52 PASMY--GSIARELIGEGS-QSPLVMGLISILKSTTGH---ESSTMNVLGVSSFKASSII 105
Query: 121 PFLQGSKWLPCNEPGTVPESDYVDKGGTTDKIQFSGSENLNGVSLQLKTSGSWLSKLLNV 180
PFLQGSKW+ P D VDKGGT E+ NG S W++KLL+V
Sbjct: 106 PFLQGSKWIK-----NPPVIDDVDKGGTVCDDD-DDKESRNGGS-------GWVNKLLSV 152
Query: 181 CSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDI 240
CS+DAKAAFTA+TVS LF+S LAEP+SIPS SM PTLD GDR++AEKVSYFF++PEVSDI
Sbjct: 153 CSEDAKAAFTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDI 212
Query: 241 VIFRAPPILQEI---GFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAY 297
VIF+APPIL E G+SS DVFIKRIVA+ GD VEV GKL VN + Q+EDF+LEP++Y
Sbjct: 213 VIFKAPPILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSY 272
Query: 298 EMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSRVSDMLDDPYAM 357
EM+P+ VP+GYVFVLGDNRN SFDSHNWGPLPIENIVGRSVFRYWPPS+VSD + A+
Sbjct: 273 EMEPMFVPKGYVFVLGDNRNKSFDSHNWGPLPIENIVGRSVFRYWPPSKVSDTIYHDQAI 332
Query: 358 KNAAVPIA 365
V ++
Sbjct: 333 TRGPVAVS 340
>sp|Q8H0W1|PLSP1_ARATH Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1
PE=2 SV=2
Length = 291
Score = 255 bits (652), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 146/183 (79%)
Query: 166 QLKTSGSWLSKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILA 225
+++ + L+ SDDA+ F A+ VS F+ F+AEPR IPS SM PT DVGDR++A
Sbjct: 96 EVEEKNRLFPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVA 155
Query: 226 EKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVA 285
EKVSY+F++P +DIVIF++PP+LQE+G++ DVFIKRIVA GD VEVH GKL+VNGVA
Sbjct: 156 EKVSYYFRKPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVA 215
Query: 286 QDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPS 345
++E FILEP YEM P+ VPE VFV+GDNRNNS+DSH WGPLP++NI+GRSVFRYWPP+
Sbjct: 216 RNEKFILEPPGYEMTPIRVPENSVFVMGDNRNNSYDSHVWGPLPLKNIIGRSVFRYWPPN 275
Query: 346 RVS 348
RVS
Sbjct: 276 RVS 278
>sp|P72660|LEP1_SYNY3 Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=lepB1 PE=3 SV=1
Length = 196
Score = 161 bits (408), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 105/152 (69%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
+ F+AEPR IPS SM PTL+ GDR++ EKVSY F P+V DI++F P +LQ G+ G
Sbjct: 31 RFFVAEPRYIPSDSMLPTLEQGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQGYDLGQ 90
Query: 259 VFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNN 318
FIKR++A G VEV+ G + +G E++ILEP Y + V VP+G VFV+GDNRNN
Sbjct: 91 AFIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILEPPQYNLPAVRVPDGQVFVMGDNRNN 150
Query: 319 SFDSHNWGPLPIENIVGRSVFRYWPPSRVSDM 350
S DSH WG LP +NI+G ++FR++P SR +
Sbjct: 151 SNDSHVWGFLPQQNIIGHALFRFFPASRWGQL 182
>sp|P73157|LEP2_SYNY3 Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=lepB2 PE=3 SV=1
Length = 218
Score = 155 bits (392), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 107/175 (61%), Gaps = 2/175 (1%)
Query: 179 NVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVS 238
N + K TA+ ++ ++F+AE R IPS+SM PTL + DR++ EK+SY + PE
Sbjct: 19 NTWLELGKTMVTAVILAIGIRTFVAEARYIPSSSMEPTLQINDRLIIEKISYRLRDPERG 78
Query: 239 DIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYE 298
+IV+F L+ F D FIKRI+ GD V V G + VNG DE++I P AYE
Sbjct: 79 EIVVFNPTDALKAKNFH--DAFIKRIIGLPGDEVRVSQGNVYVNGKMLDENYIAAPPAYE 136
Query: 299 MDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSRVSDMLDD 353
PV VP+ VLGDNRNNS+DSH WG +P E ++GR+ R+WP RV + DD
Sbjct: 137 YGPVKVPDDQYLVLGDNRNNSYDSHYWGFVPREKLLGRAFVRFWPVPRVGLLTDD 191
>sp|Q51876|LEP_PHOLA Signal peptidase I OS=Phormidium laminosum GN=lepB PE=3 SV=1
Length = 203
Score = 151 bits (381), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 107/165 (64%)
Query: 186 KAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRA 245
K ++ ++ ++F+AE R IPS SM PTL+V DR++ EK+SY F P DI++F
Sbjct: 33 KTIGLSVVLALGIRTFVAEARYIPSESMLPTLEVNDRLIVEKISYHFNPPRRGDIIVFHP 92
Query: 246 PPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPVVVP 305
L++ S + FIKR++ G+ V+V GG++L+NG +E++I P Y+ P VP
Sbjct: 93 TEALKQQNPSLNEAFIKRVIGLPGETVQVTGGRVLINGQPLEENYIQSPPDYQWGPEKVP 152
Query: 306 EGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSRVSDM 350
VLGDNRNNS+DSH WG +P +NI+GR+V R+WP +R+ ++
Sbjct: 153 ADSFLVLGDNRNNSYDSHFWGYVPRQNIIGRAVVRFWPVNRLGEL 197
>sp|Q10789|LEP_MYCTU Signal peptidase I OS=Mycobacterium tuberculosis GN=lepB PE=1 SV=1
Length = 294
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 99/214 (46%), Gaps = 53/214 (24%)
Query: 185 AKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLD-----VGDRILAEKVSYFFKRPEVSD 239
A A A+ + ++ +F+A P IPS SM PTL VGDRI+ +K+SY F P+ D
Sbjct: 69 AVLAVIAVVLYYVMLTFVARPYLIPSESMEPTLHGCSTCVGDRIMVDKLSYRFGSPQPGD 128
Query: 240 IVIFRAPP---------------------ILQEIGFSSGDV--FIKRIVATAGDCVEVHG 276
+++FR PP L IGF D +KR++A G V+
Sbjct: 129 VIVFRGPPSWNVGYKSIRSHNVAVRWVQNALSFIGFVPPDENDLVKRVIAVGGQTVQCRS 188
Query: 277 GK-LLVNGVAQDEDFILEP------------LAYEMDPVVVPEGYVFVLGDNRNNSFDSH 323
L VNG E + L+P L E PV VP G V+V+GDNR +S DS
Sbjct: 189 DTGLTVNGRPLKEPY-LDPATMMADPSIYPCLGSEFGPVTVPPGRVWVMGDNRTHSADSR 247
Query: 324 NWGPL-----------PIENIVGRSVFRYWPPSR 346
PL P+ N++G++ WPPSR
Sbjct: 248 AHCPLLCTDDPLPGTVPVANVIGKARLIVWPPSR 281
>sp|O33021|LEP_MYCLE Probable signal peptidase I OS=Mycobacterium leprae (strain TN)
GN=lepB PE=3 SV=1
Length = 289
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 112/254 (44%), Gaps = 67/254 (26%)
Query: 151 KIQFSGSENLNGVSLQLKTSGSWLSKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPS 210
++ + +E GVS K S W +L A A+ + ++ +F+A P IPS
Sbjct: 32 EVSETAAEAAIGVSEPKKRSALWEFAIL---------AVIAIGLYYVMLTFVARPYLIPS 82
Query: 211 ASMNPTLD-----VGDRILAEKVSYFFKRPEVSDIVIFRAPP------------------ 247
SM PTL VGDRI+ +K++Y F P+ D+++F+ PP
Sbjct: 83 ESMEPTLHGCSGCVGDRIMVDKITYRFSSPQPGDVIVFKGPPSWNTMYKSIRSNNIVLRS 142
Query: 248 ---ILQEIGFSSGDV--FIKRIVATAGDCVEVHGGK-LLVNG----------VAQDEDFI 291
L +GF D +KR++A G V+ L VNG V + D
Sbjct: 143 VQNALSFVGFVPPDENDLVKRVIAVGGQTVQCRSDTGLTVNGKPLKEPYLRPVTMNADLS 202
Query: 292 LEP-LAYEMDPVVVPEGYVFVLGDNRNNSFDSH------------------NWGPLPIEN 332
P L E PV VP+G ++V+GDNR +S DS N G +P+ N
Sbjct: 203 FSPCLGSEFGPVTVPQGRLWVMGDNRIHSADSRYHCNSTDVVNGLSCTGDPNSGTVPVSN 262
Query: 333 IVGRSVFRYWPPSR 346
++G++ WPPSR
Sbjct: 263 VIGKARVVVWPPSR 276
>sp|P26844|LEP_PSEFL Signal peptidase I OS=Pseudomonas fluorescens GN=lepB PE=3 SV=1
Length = 284
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 100/220 (45%), Gaps = 62/220 (28%)
Query: 185 AKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVS------ 238
K+ F L + + +SFL EP IPS SM PTLDVGD IL K SY + P +
Sbjct: 63 GKSFFPVLFIVLVLRSFLVEPFQIPSGSMKPTLDVGDFILVNKFSYGIRLPVIDKKVIEV 122
Query: 239 ------DIVIFRAPPILQEIGFSSGDV-FIKRIVATAGDCVEVHGGK-LLVNGVAQDEDF 290
D+++FR P S +V +IKR+V GD V K L +NG + E
Sbjct: 123 GDPQRGDVMVFRYP--------SDPNVNYIKRVVGLPGDVVRYTSDKRLFINGESVAEKL 174
Query: 291 I----------------LEPLAYEMDPVV------------VPEGYVFVLGDNRNNSFDS 322
+ L + +E+ + VP G+ F++GDNR+NS DS
Sbjct: 175 LGAEPNTLGSAELYQEKLGAVEHEIRKEMSRYRAMPDGQWKVPAGHYFMMGDNRDNSNDS 234
Query: 323 HNW----------GPLPIENIVGR--SVFRYWPPSRVSDM 350
W G +P ENIVG+ +V+ WP ++S +
Sbjct: 235 RYWDDPNIPKDLLGMVPDENIVGKAFAVWMSWPEPKLSHL 274
>sp|Q5HHB9|LEP_STAAC Signal peptidase IB OS=Staphylococcus aureus (strain COL) GN=spsB
PE=3 SV=2
Length = 191
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 80/175 (45%), Gaps = 27/175 (15%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ V Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIVGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------- 302
+ D ++KR++ GD VE L VNG QDE ++ L ++
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQV 124
Query: 303 -----------VVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSR 346
V+P+G VLGDNR S DS +G + + IVG+ FR+WP S
Sbjct: 125 KDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSE 179
>sp|Q9I5G7|LEP_PSEAE Signal peptidase I OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=lepB PE=3 SV=1
Length = 284
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 102/220 (46%), Gaps = 62/220 (28%)
Query: 185 AKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFK----------- 233
K+ F L + + +SFL EP IPS SM PTL+VGD IL K +Y +
Sbjct: 63 GKSFFPVLFIVLVLRSFLVEPFQIPSGSMKPTLEVGDFILVNKFAYGIRLPVLDTKVIPI 122
Query: 234 -RPEVSDIVIFRAPPILQEIGFSSGDV-FIKRIVATAGDCVEVHGGK-LLVNG------- 283
P+ D+++FR P S ++ +IKR+V GD V K L VNG
Sbjct: 123 GDPQRGDVMVFRYP--------SEPNINYIKRVVGLPGDTVRYTKEKRLYVNGELVAEKL 174
Query: 284 -----------------VAQDEDFILEPLA-YEMDP---VVVPEGYVFVLGDNRNNSFDS 322
+ Q E I + ++ Y ++P +P G+ F++GDNR+NS DS
Sbjct: 175 VGEEPGTLGSVTLYQEKLGQAEHLIRKEMSRYRIEPDRQWTIPAGHYFMMGDNRDNSNDS 234
Query: 323 HNW----------GPLPIENIVGR--SVFRYWPPSRVSDM 350
W G +P NIVG+ +V+ WP ++S++
Sbjct: 235 RYWNDPKIPKDLLGMVPDRNIVGKAFAVWMSWPDPKMSNL 274
>sp|P0A069|LEP_STAAW Signal peptidase IB OS=Staphylococcus aureus (strain MW2) GN=spsB
PE=3 SV=1
Length = 191
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 27/175 (15%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ + Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------- 302
+ D ++KR++ GD VE L VNG QDE ++ L ++
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQV 124
Query: 303 -----------VVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSR 346
V+P+G VLGDNR S DS +G + + IVG+ FR+WP S
Sbjct: 125 KDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSE 179
>sp|P0A070|LEP_STAAU Signal peptidase IB OS=Staphylococcus aureus GN=spsB PE=3 SV=1
Length = 191
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 27/175 (15%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ + Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------- 302
+ D ++KR++ GD VE L VNG QDE ++ L ++
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQV 124
Query: 303 -----------VVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSR 346
V+P+G VLGDNR S DS +G + + IVG+ FR+WP S
Sbjct: 125 KDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSE 179
>sp|Q6GAW1|LEP_STAAS Signal peptidase IB OS=Staphylococcus aureus (strain MSSA476)
GN=spsB PE=3 SV=1
Length = 191
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 27/175 (15%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ + Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------- 302
+ D ++KR++ GD VE L VNG QDE ++ L ++
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQV 124
Query: 303 -----------VVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSR 346
V+P+G VLGDNR S DS +G + + IVG+ FR+WP S
Sbjct: 125 KDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSE 179
>sp|P0A068|LEP_STAAN Signal peptidase IB OS=Staphylococcus aureus (strain N315) GN=spsB
PE=1 SV=1
Length = 191
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 27/175 (15%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ + Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------- 302
+ D ++KR++ GD VE L VNG QDE ++ L ++
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQV 124
Query: 303 -----------VVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSR 346
V+P+G VLGDNR S DS +G + + IVG+ FR+WP S
Sbjct: 125 KDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSE 179
>sp|P0A067|LEP_STAAM Signal peptidase IB OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=spsB PE=3 SV=1
Length = 191
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 27/175 (15%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ + Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------- 302
+ D ++KR++ GD VE L VNG QDE ++ L ++
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQV 124
Query: 303 -----------VVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSR 346
V+P+G VLGDNR S DS +G + + IVG+ FR+WP S
Sbjct: 125 KDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSE 179
>sp|Q6GIC3|LEP_STAAR Signal peptidase IB OS=Staphylococcus aureus (strain MRSA252)
GN=spsB PE=3 SV=1
Length = 191
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 27/175 (15%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ + Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------- 302
+ D ++KR++ GD VE L VNG QDE ++ L ++
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQV 124
Query: 303 -----------VVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSR 346
V+P+G VLGDNR S DS +G + + IVG+ FR+WP S
Sbjct: 125 KDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWPFSE 179
>sp|P41025|LEP2_BACAM Signal peptidase I OS=Bacillus amyloliquefaciens GN=sipS2 PE=3 SV=1
Length = 193
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 89/189 (47%), Gaps = 19/189 (10%)
Query: 166 QLKTSGSWLSKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILA 225
Q TS + + N + KA A+ ++ L + FL EP + +SM PTL G+R+
Sbjct: 5 QKPTSEKSVKRKSNTYWEWGKAIIIAVALALLIRHFLFEPYLVEGSSMYPTLHDGERLFV 64
Query: 226 EKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVA 285
K + E DIVI G +S ++KR++ G+ VE+ L +NG
Sbjct: 65 NKSVNYIGEIERGDIVIIN--------GDTSKVHYVKRLIGKPGETVEMKNDTLYINGKK 116
Query: 286 QDEDFILE----------PLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIEN-IV 334
E ++ L + PV VP+G FV+GDNR NS DS N L EN IV
Sbjct: 117 IAEPYLASNKKEAKKLGVNLTGDFGPVKVPKGKYFVMGDNRLNSMDSRNGLGLIAENRIV 176
Query: 335 GRSVFRYWP 343
G S F ++P
Sbjct: 177 GTSKFVFFP 185
>sp|P71013|LEPT_BACSU Signal peptidase I T OS=Bacillus subtilis (strain 168) GN=sipT PE=1
SV=1
Length = 193
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 86/180 (47%), Gaps = 19/180 (10%)
Query: 175 SKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKR 234
K N + KA A+ ++ L + FL EP + +SM PTL G+R+ K +
Sbjct: 14 KKKTNTYLEWGKAIVIAVLLALLIRHFLFEPYLVEGSSMYPTLHDGERLFVNKTVNYIGE 73
Query: 235 PEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILE- 293
+ DIVI G +S ++KR++ G+ V++ L +NG E ++ +
Sbjct: 74 LKRGDIVIIN--------GETSKIHYVKRLIGKPGETVQMKDDTLYINGKKVAEPYLSKN 125
Query: 294 ---------PLAYEMDPVVVPEGYVFVLGDNRNNSFDSHN-WGPLPIENIVGRSVFRYWP 343
L + PV VP+G FV+GDNR NS DS N G + + IVG S F ++P
Sbjct: 126 KKEAEKLGVSLTGDFGPVKVPKGKYFVMGDNRLNSMDSRNGLGLIAEDRIVGTSKFVFFP 185
>sp|P42668|LEP_BACLI Signal peptidase I OS=Bacillus licheniformis GN=lepB PE=3 SV=1
Length = 186
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 185 AKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFR 244
KA A+ ++ L ++FL EP + SM+PTL G+R+ K + + DIVI
Sbjct: 17 VKAIIIAVVLALLIRAFLFEPYLVEGTSMDPTLHDGERLFVYKTVRYVGEFKRGDIVIID 76
Query: 245 APPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILE----------P 294
G ++KR++ GD V++ L +NG E ++ E
Sbjct: 77 --------GDEKNVHYVKRLIGLPGDTVQMKDDTLYINGKKVSEPYLSENRKEAEAVGVK 128
Query: 295 LAYEMDPVVVPEGYVFVLGDNRNNSFDSHN-WGPLPIENIVGRSVFRYWP 343
L + PV VPEG FV+GDNR S DS N G + + + G S F ++P
Sbjct: 129 LTGDFGPVKVPEGKYFVMGDNRQRSMDSRNGLGLIDKKRVAGTSQFVFFP 178
>sp|Q57350|LEPQ_BACNA Signal peptidase I P OS=Bacillus subtilis subsp. natto GN=sipP PE=3
SV=1
Length = 185
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 83/176 (47%), Gaps = 25/176 (14%)
Query: 186 KAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYF---FKRPEVSDIVI 242
KA AL + FL ++FL EP + SM PTL +R+ K + FKR DIV+
Sbjct: 17 KAILIALILVFLVRTFLFEPYIVQGESMKPTLFNSERLFVNKFVKYTGDFKR---GDIVV 73
Query: 243 FRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILE--------- 293
G ++KR++ GD +E+ L VNG +E+++ E
Sbjct: 74 LN--------GEEKKTHYVKRLIGLPGDTIEMKNDNLFVNGKRFNEEYLKENKKDAHDSD 125
Query: 294 -PLAYEMDPVVVPEGYVFVLGDNRNNSFDSHN-WGPLPIENIVGRSVFRYWPPSRV 347
L + P+ VP+ FV+GDNR NS DS N G ++IVG ++P R+
Sbjct: 126 LNLTGDFGPIKVPKDKYFVMGDNRQNSMDSRNGLGLFNKKDIVGVEELVFFPLDRI 181
>sp|P41027|LEP_BACCL Signal peptidase I OS=Bacillus caldolyticus GN=lepB PE=3 SV=1
Length = 182
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 80/172 (46%), Gaps = 29/172 (16%)
Query: 189 FTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPI 248
F A+ V + F+ + SM PTL+ G+ ++ K+SY DI++F A
Sbjct: 15 FVAVCVVATLRLFVFSNYVVEGKSMMPTLESGNLLIVNKLSYDIGPIRRFDIIVFHA--- 71
Query: 249 LQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDE-----------------DFI 291
+ + ++KR++ GD + L VNG DE DF
Sbjct: 72 ------NKKEDYVKRVIGLPGDRIAYKNDILYVNGKKVDEPYLRPYKQKLLDGRLTGDFT 125
Query: 292 LEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWP 343
LE + VP G +FVLGDNR +S+DS ++G + I IVG+ FRYWP
Sbjct: 126 LEEVT---GKTRVPPGCIFVLGDNRLSSWDSRHFGFVKINQIVGKVDFRYWP 174
>sp|P28628|LEPS_BACSU Signal peptidase I S OS=Bacillus subtilis (strain 168) GN=sipS PE=1
SV=1
Length = 184
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 22/171 (12%)
Query: 185 AKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFR 244
AKA A+ ++ L ++F+ P + SM PTL +R+ + + DIV+
Sbjct: 16 AKAIVIAVVLALLIRNFIFAPYVVDGDSMYPTLHNRERVFVNMTVKYIGEFDRGDIVVLN 75
Query: 245 APPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFI-----------LE 293
+ ++KRI+ GD VE+ +L +NG DE ++ +
Sbjct: 76 GDDVH----------YVKRIIGLPGDTVEMKNDQLYINGKKVDEPYLAANKKRAKQDGFD 125
Query: 294 PLAYEMDPVVVPEGYVFVLGDNRNNSFDSHN-WGPLPIENIVGRSVFRYWP 343
L + PV VP+ FV+GDNR NS DS N G + I G S F ++P
Sbjct: 126 HLTDDFGPVKVPDNKYFVMGDNRRNSMDSRNGLGLFTKKQIAGTSKFVFYP 176
>sp|O67088|LEP_AQUAE Signal peptidase I OS=Aquifex aeolicus (strain VF5) GN=lepB PE=3
SV=1
Length = 256
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 86/208 (41%), Gaps = 54/208 (25%)
Query: 189 FTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPP- 247
F + + ++A+ +IPSASM PTL VGD IL K+ Y P D+++F+ P
Sbjct: 9 FLIILAVLFIREYIAQAYTIPSASMEPTLLVGDFILVNKLVYSLSEPMRGDMIVFKYPKN 68
Query: 248 ----ILQEIGFSSGD-------------VFIKRIVATAG--------------DCVEV-- 274
++ I GD V I ++ DC +
Sbjct: 69 PDIDFIKRIIARGGDTVEFFPYYDEKNNVLIYKVAVNGKLYELTYEGEKNYSYDCYQYRE 128
Query: 275 ----HGGKLLVNGVAQDEDFILEP------------LAYEMD----PVVVPEGYVFVLGD 314
G+++ + V + P L Y D VVPEGY FV+GD
Sbjct: 129 KLYREDGEVIQHSVCFRNTLLKVPGMVYNAISSDLCLKYNEDGFCVKFVVPEGYYFVMGD 188
Query: 315 NRNNSFDSHNWGPLPIENIVGRSVFRYW 342
NR+NS DS WG +P ENI G++ Y+
Sbjct: 189 NRDNSQDSRFWGFVPRENIEGKAFVIYY 216
>sp|O07560|LEPV_BACSU Signal peptidase I V OS=Bacillus subtilis (strain 168) GN=sipV PE=2
SV=1
Length = 168
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 72/143 (50%), Gaps = 23/143 (16%)
Query: 207 SIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVA 266
+ SMNPT G+ +L K S+ FK DIV+F+ P V IKR++
Sbjct: 29 KVEGVSMNPTFQEGNELLVNKFSHRFKTIHRFDIVLFKGP---------DHKVLIKRVIG 79
Query: 267 TAGDCVEVHGGKLLVNGVAQDEDFI--LEPLA--------YEMDPVV----VPEGYVFVL 312
G+ ++ +L VNG E F+ L+ ++ + + V VP+G FV+
Sbjct: 80 LPGETIKYKDDQLYVNGKQVAEPFLKHLKSVSAGSHVTGDFSLKDVTGTSKVPKGKYFVV 139
Query: 313 GDNRNNSFDSHNWGPLPIENIVG 335
GDNR SFDS ++GP+ +NIVG
Sbjct: 140 GDNRIYSFDSRHFGPIREKNIVG 162
>sp|P41026|LEP1_BACAM Signal peptidase I OS=Bacillus amyloliquefaciens GN=sipA PE=3 SV=1
Length = 185
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 78/176 (44%), Gaps = 21/176 (11%)
Query: 183 DDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVI 242
D AKA A+ ++ L ++FL P + SM PTL +RI + + IV+
Sbjct: 16 DWAKAIIIAVVLAVLIRNFLFAPYVVDGESMEPTLHDRERIFVNMTVKYISDFKRGQIVV 75
Query: 243 FRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILE--------- 293
+ ++KRI+ GD V++ +L +NG E ++
Sbjct: 76 LNG----------ENEHYVKRIIGLPGDTVQMKNDQLYINGKKVSEPYLAANKKKAKQDG 125
Query: 294 -PLAYEMDPVVVPEGYVFVLGDNRNNSFDSHN-WGPLPIENIVGRSVFRYWPPSRV 347
L + PV VP+ FV+GDNR NS DS N G + I G S F ++P + +
Sbjct: 126 YTLTDDFGPVKVPDDKYFVMGDNRRNSMDSRNGLGLFTKKQIAGTSKFVFFPFNEI 181
>sp|P37943|LEPP_BACNA Signal peptidase I P OS=Bacillus subtilis subsp. natto GN=sipP PE=1
SV=1
Length = 186
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 78/174 (44%), Gaps = 19/174 (10%)
Query: 185 AKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFR 244
KA A+ ++ L ++FL EP + SM+PTL +R+ K + + DI+I
Sbjct: 17 GKAIVIAVILALLIRNFLFEPYVVEGKSMDPTLVDSERLFVNKTVKYTGNFKRGDIIILN 76
Query: 245 APPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILE----------P 294
G ++KR++ GD VE+ L +NG E ++
Sbjct: 77 --------GKEKSTHYVKRLIGLPGDTVEMKNDHLFINGNEVKEPYLSYNKENAKKVGIN 128
Query: 295 LAYEMDPVVVPEGYVFVLGDNRNNSFDSHN-WGPLPIENIVGRSVFRYWPPSRV 347
L + P+ VP+ FV+GDNR S DS N G ++I G F ++P S +
Sbjct: 129 LTGDFGPIKVPKDKYFVMGDNRQESMDSRNGLGLFTKDDIQGTEEFVFFPFSNM 182
>sp|Q89AM6|LEP_BUCBP Signal peptidase I OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=lepB PE=3 SV=1
Length = 310
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 96/254 (37%), Gaps = 85/254 (33%)
Query: 187 AAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY------------FFKR 234
+ F L + F+ ++F+ EP IPS SM PTL GD IL +K SY F
Sbjct: 57 SFFPILIIVFIIRTFICEPFQIPSESMMPTLLPGDFILVKKFSYGIKNPFSNNVIVFINT 116
Query: 235 PEVSDIVIFRAPP-----ILQEIGFSSGD-----VFIKRIVATAGDCVEVHG-------- 276
P+ DIV+F+ P ++ I GD + KR+ T + E H
Sbjct: 117 PKRGDIVVFKHPNNNAINYVKRIVGLPGDKINYNILTKRLTITPNNINEQHTKNISINYK 176
Query: 277 -------------GKLLVNGVAQDE---------------------------------DF 290
+++N V E D
Sbjct: 177 YIKPNDFTKHFKLNNIILNNVHSLESSNNNLLQLEMYQEKIEKIAYNIFFKKKLIDQKDL 236
Query: 291 ILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRY--------- 341
+ + + +VP+ FVLGDNR+NS DS WG +P +N++G+ VF +
Sbjct: 237 YFKQFSQKQGTWIVPKHKYFVLGDNRDNSLDSRYWGFVPEKNLIGKVVFIWMHLIKKEGQ 296
Query: 342 WPPSRVSDMLDDPY 355
WP D + + Y
Sbjct: 297 WPTGIQFDRIGNIY 310
>sp|P0A065|LEPH_STAAW Inactive signal peptidase IA OS=Staphylococcus aureus (strain MW2)
GN=spsA PE=3 SV=1
Length = 174
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCVEVHGGKLLVNGVAQD---------EDFILEPLAYEMDPVVVPEGYV 309
++ RI+A G + G+L + D +DF L E+D ++P
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFK-ELDGDIIPPNNF 130
Query: 310 FVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSR 346
VL D+ NN DS +G + ++I+G RY+P S+
Sbjct: 131 VVLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYPFSK 167
>sp|P0A066|LEPH_STAAU Inactive signal peptidase IA OS=Staphylococcus aureus GN=spsA PE=3
SV=1
Length = 174
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCVEVHGGKLLVNGVAQD---------EDFILEPLAYEMDPVVVPEGYV 309
++ RI+A G + G+L + D +DF L E+D ++P
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFK-ELDGDIIPPNNF 130
Query: 310 FVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSR 346
VL D+ NN DS +G + ++I+G RY+P S+
Sbjct: 131 VVLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYPFSK 167
>sp|Q6GAW2|LEPH_STAAS Inactive signal peptidase IA OS=Staphylococcus aureus (strain
MSSA476) GN=spsA PE=3 SV=1
Length = 174
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCVEVHGGKLLVNGVAQD---------EDFILEPLAYEMDPVVVPEGYV 309
++ RI+A G + G+L + D +DF L E+D ++P
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFK-ELDGDIIPPNNF 130
Query: 310 FVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSR 346
VL D+ NN DS +G + ++I+G RY+P S+
Sbjct: 131 VVLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYPFSK 167
>sp|P0A064|LEPH_STAAN Inactive signal peptidase IA OS=Staphylococcus aureus (strain N315)
GN=spsA PE=3 SV=1
Length = 174
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCVEVHGGKLLVNGVAQD---------EDFILEPLAYEMDPVVVPEGYV 309
++ RI+A G + G+L + D +DF L E+D ++P
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFK-ELDGDIIPPNNF 130
Query: 310 FVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSR 346
VL D+ NN DS +G + ++I+G RY+P S+
Sbjct: 131 VVLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYPFSK 167
>sp|P0A063|LEPH_STAAM Inactive signal peptidase IA OS=Staphylococcus aureus (strain Mu50
/ ATCC 700699) GN=spsA PE=3 SV=1
Length = 174
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCVEVHGGKLLVNGVAQD---------EDFILEPLAYEMDPVVVPEGYV 309
++ RI+A G + G+L + D +DF L E+D ++P
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFK-ELDGDIIPPNNF 130
Query: 310 FVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSR 346
VL D+ NN DS +G + ++I+G RY+P S+
Sbjct: 131 VVLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYPFSK 167
>sp|Q5HHC0|LEPH_STAAC Inactive signal peptidase IA OS=Staphylococcus aureus (strain COL)
GN=spsA PE=3 SV=1
Length = 174
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCVEVHGGKLLVNGVAQD---------EDFILEPLAYEMDPVVVPEGYV 309
++ RI+A G + G+L + D +DF L E+D ++P
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFK-ELDGDIIPPNNF 130
Query: 310 FVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSR 346
VL D NN DS +G + ++I+G RY+P S+
Sbjct: 131 VVLNDQDNNKHDSRQFGLIDKKDIIGNVSLRYYPFSK 167
>sp|P44454|LEP_HAEIN Signal peptidase I OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=lepB PE=3 SV=1
Length = 349
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 95/240 (39%), Gaps = 81/240 (33%)
Query: 181 CSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFK------- 233
S+ + F L V FL +SFL EP IPS SM TL VGD ++ K +Y K
Sbjct: 84 ASEFLSSLFPVLAVVFLVRSFLFEPFQIPSGSMESTLRVGDFLVVNKYAYGVKDPIFQNT 143
Query: 234 -----RPEVSDIVIFRAPP--------------ILQEIGFSSGDV-----FIKRIVATAG 269
+P+ D+++F+AP + + SS D +IKRIV G
Sbjct: 144 IIAGEKPQRGDVIVFKAPQQALIRTGLGATRAAFAENLALSSKDNMSGVDYIKRIVGKGG 203
Query: 270 DCV--EVHGGKLLV----NGVAQDEDFILEPLAYEMDP--------------------VV 303
D V +V L V G + D + Y +P V+
Sbjct: 204 DRVIFDVEQKTLKVVYGKEGKPCEIDCETKAFEYTQNPTNPAFPNELELTEKGDVTHNVL 263
Query: 304 VPE------------------------GYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVF 339
+ E G FV+GD+R++S DS WG +P +NIVG++ +
Sbjct: 264 ISEYRRYSDLEFFPQEGMQTAEWLVPEGQYFVMGDHRDHSDDSRFWGFVPEKNIVGKATY 323
>sp|Q6GIC4|LEPH_STAAR Inactive signal peptidase IA OS=Staphylococcus aureus (strain
MRSA252) GN=spsA PE=3 SV=1
Length = 174
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCVEVHGGKLLVNGVAQD---------EDFILEPLAYEMDPVVVPEGYV 309
++ RI+A G + G+L + D +DF L ++D ++P
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFK-KLDGDIIPPNNF 130
Query: 310 FVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWPPSR 346
VL D+ NN DS +G + ++I+G RY+P S+
Sbjct: 131 VVLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYPFSK 167
>sp|P42959|LEPU_BACSU Signal peptidase I U OS=Bacillus subtilis (strain 168) GN=sipU PE=1
SV=1
Length = 187
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 24/161 (14%)
Query: 196 FLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFS 255
F + +P I +SM PTL +RIL +K + DI++
Sbjct: 30 FTIRLVFYKPFLIEGSSMAPTLKDSERILVDKAVKWTGGFHRGDIIVIHDK--------K 81
Query: 256 SGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMD------------PVV 303
SG F+KR++ GD +++ +L +N +E ++ E Y+ + V
Sbjct: 82 SGRSFVKRLIGLPGDSIKMKNDQLYINDKKVEEPYLKE---YKQEVKESGVTLTGDFEVE 138
Query: 304 VPEGYVFVLGDNRNNSFDSHNWGPLPIE-NIVGRSVFRYWP 343
VP G FV+GDNR NS DS N +P E +I+G ++P
Sbjct: 139 VPSGKYFVMGDNRLNSLDSRNGMGMPSEDDIIGTESLVFYP 179
>sp|Q8L2J7|LEP_RICTY Signal peptidase I OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=lepB PE=1 SV=1
Length = 264
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 92/220 (41%), Gaps = 66/220 (30%)
Query: 187 AAFT-ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY--------------- 230
A+FT + ++ + + + EP ++P+ SM T+ D I + K SY
Sbjct: 17 ASFTFVICIALVIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPL 76
Query: 231 -----FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVN--- 282
F + PE DIV+FR P + +IKR++ GD +++ + +N
Sbjct: 77 FKGRVFAREPERGDIVVFRPPNDMSV-------RYIKRLIGLPGDKIQLIDDVIYINDKK 129
Query: 283 ------GVAQDEDFI------------LEPLAYEMDPVV---------------VPEGYV 309
G ED I +Y++ P+ VPEG
Sbjct: 130 IERTEVGTYIGEDGIKYLKFKETLPNGRTYFSYKLAPIFGIISNDRYSNTGVFYVPEGQY 189
Query: 310 FVLGDNRNNSFDSH-NWGPLPIENIVGRSVFRYWPPSRVS 348
F LGDNR+ S DS N G +P EN +G++ F W ++++
Sbjct: 190 FFLGDNRDRSNDSRVNLGFVPFENFIGKAQF-IWFSTKIT 228
>sp|A8GM78|LEP_RICAH Signal peptidase I OS=Rickettsia akari (strain Hartford) GN=lepB
PE=3 SV=1
Length = 266
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 65/215 (30%)
Query: 191 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY-------------------- 230
+ ++ L + + EP ++P+ SM T+ D I + K SY
Sbjct: 24 VICIALLIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRI 83
Query: 231 FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVN-------- 282
F + PE DIV+FR P + +IKR++ GD +++ + +N
Sbjct: 84 FAREPERGDIVVFRPPNDMNV-------RYIKRLIGLPGDKIQLIDDVIYINDKKIERTE 136
Query: 283 -GVAQDEDFI------------LEPLAYEMDPVV---------------VPEGYVFVLGD 314
G ED I +Y++ P+ VPEG F LGD
Sbjct: 137 VGTYTSEDGIKYLKFKETLPNGRTYFSYKLAPIFSVIYNDRYGNTDVFYVPEGKYFFLGD 196
Query: 315 NRNNSFDSH-NWGPLPIENIVGRSVFRYWPPSRVS 348
NR+ S DS N G +P EN + ++ F W ++++
Sbjct: 197 NRDQSNDSRVNLGFVPFENFIAKAQF-IWFSTKIN 230
>sp|Q9CQU8|IMP1L_MOUSE Mitochondrial inner membrane protease subunit 1 OS=Mus musculus
GN=Immp1l PE=2 SV=1
Length = 166
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 24/147 (16%)
Query: 212 SMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDC 271
SM PT+ D + AE +S F + DIVI ++P KR++ GD
Sbjct: 40 SMEPTIQNSDIVFAENLSRHFYGIQRGDIVIAKSPS-------DPKSNICKRVIGLEGD- 91
Query: 272 VEVHGGKLLVNGVAQDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIE 331
K+L + + + +Y VP G+V++ GDN NS DS +GP+P
Sbjct: 92 ------KILSTSPSD----VFKSRSY------VPTGHVWLEGDNLQNSTDSRYYGPIPYG 135
Query: 332 NIVGRSVFRYWPPSRVSDMLDDPYAMK 358
I GR F+ WP S + D P +
Sbjct: 136 LIRGRIFFKIWPFSDFGFLRDSPNGQR 162
>sp|Q4UKA7|LEP_RICFE Signal peptidase I OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=lepB PE=3 SV=1
Length = 266
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 65/215 (30%)
Query: 191 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY-------------------- 230
+ ++ L + + EP ++P+ SM T+ D I + K SY
Sbjct: 24 VICIALLIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRI 83
Query: 231 FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVN--GVAQDE 288
F + PE DIV+FR P + +IKR++ GD +++ + +N + + E
Sbjct: 84 FAREPERGDIVVFRPPNDMNV-------RYIKRLIGLPGDKIQLIDDVIYINDKKIERTE 136
Query: 289 --DFILEP-----------------LAYEMDPVV---------------VPEGYVFVLGD 314
+I E +Y++ P+ VPEG F LGD
Sbjct: 137 VGTYISEEGIKYLKFKETLPNGRTYFSYKLAPIFGVIYNDRYGNTDVFYVPEGKYFFLGD 196
Query: 315 NRNNSFDSH-NWGPLPIENIVGRSVFRYWPPSRVS 348
NR+ S DS N G +P EN + ++ F W ++++
Sbjct: 197 NRDQSNDSRVNLGFVPFENFIAKAQF-IWLSTKIT 230
>sp|A8F0M1|LEP_RICM5 Signal peptidase I OS=Rickettsia massiliae (strain Mtu5) GN=lepB
PE=3 SV=2
Length = 266
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 65/215 (30%)
Query: 191 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY-------------------- 230
+ ++ L + + EP ++P+ SM T+ D I + K SY
Sbjct: 24 VICIALLIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRI 83
Query: 231 FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVN--GVAQDE 288
F + PE DIV+FR P + +IKR++ GD +++ + +N + + E
Sbjct: 84 FAREPERGDIVVFRPPHDMSV-------RYIKRLIGLPGDKIQLIDDVIYINDKKIERTE 136
Query: 289 --DFILEP-----------------LAYEMDPV---------------VVPEGYVFVLGD 314
+I E +Y++ P+ VPEG F LGD
Sbjct: 137 VGTYISEEGIKYLKFKETLPNGRTYFSYKLAPIYGVIYNDRYGNTDVFYVPEGKYFFLGD 196
Query: 315 NRNNSFDSH-NWGPLPIENIVGRSVFRYWPPSRVS 348
NR+ S DS N G +P EN + ++ F W ++++
Sbjct: 197 NRDQSNDSRVNLGFVPFENFIAKAQF-IWFSTKIT 230
>sp|Q96LU5|IMP1L_HUMAN Mitochondrial inner membrane protease subunit 1 OS=Homo sapiens
GN=IMMP1L PE=2 SV=1
Length = 166
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 58/134 (43%), Gaps = 24/134 (17%)
Query: 212 SMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDC 271
SM PT+ D + AE +S F + DIVI ++P KR++ GD
Sbjct: 40 SMEPTIQNSDIVFAENLSRHFYGIQRGDIVIAKSPS-------DPKSNICKRVIGLEGD- 91
Query: 272 VEVHGGKLLVNGVAQDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIE 331
K+L P + VP G+V++ GDN NS DS +GP+P
Sbjct: 92 ------KILTT----------SPSDFFKSHSYVPMGHVWLEGDNLQNSTDSRCYGPIPYG 135
Query: 332 NIVGRSVFRYWPPS 345
I GR F+ WP S
Sbjct: 136 LIRGRIFFKIWPLS 149
>sp|A8GYE1|LEP_RICB8 Signal peptidase I OS=Rickettsia bellii (strain OSU 85-389) GN=lepB
PE=3 SV=1
Length = 289
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 65/225 (28%)
Query: 181 CSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY---------- 230
+ + K+ + ++ + + + E +P+ SM T+ DRI K SY
Sbjct: 37 TAQEWKSFILVVVIALMIRILIIESFVVPTGSMKATILENDRIFGTKYSYGYSNYSLSFF 96
Query: 231 ----------FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLL 280
F + PE DI+IFR P +IKR++ GD V++ +
Sbjct: 97 DFIHLFKGRIFARTPERGDIIIFRPPH-------EMNTRYIKRLIGLPGDKVQLIDDVIY 149
Query: 281 VN---------GVAQDED-----FILEPL-------AYEMDPVV---------------V 304
+N G+ E+ E L +Y++ PV+ V
Sbjct: 150 INDEKIERVESGIYVSEEGRKYLKFKETLPNGKTYFSYKLAPVLGIMFNDKYGNTDAFYV 209
Query: 305 PEGYVFVLGDNRNNSFDSH-NWGPLPIENIVGRSVFRYWPPSRVS 348
PEG F LGDNR+ S DS + G +P EN + ++ F W ++++
Sbjct: 210 PEGEYFFLGDNRDQSNDSRIDLGFVPFENFIAKAQF-IWFSTKIT 253
>sp|Q9ZE32|LEP_RICPR Signal peptidase I OS=Rickettsia prowazekii (strain Madrid E)
GN=lepB PE=3 SV=1
Length = 264
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 87/215 (40%), Gaps = 65/215 (30%)
Query: 191 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY-------------------- 230
+ ++ + + + EP ++P+ SM T+ D I + K SY
Sbjct: 22 VICIALVIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIHLFKGRV 81
Query: 231 FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVN-------- 282
F + PE DIV+FR P + +IKR++ GD +++ + +N
Sbjct: 82 FAREPERGDIVVFRPPNDMSV-------RYIKRLIGLPGDKIQLIDDVIYINDKKIERTE 134
Query: 283 -GVAQDEDFI------------LEPLAYEMDPVV---------------VPEGYVFVLGD 314
G ED I +Y++ P+ VPEG F LGD
Sbjct: 135 VGTYIGEDGIKYLKFKETLPNGRTYFSYKLAPIFGVIPSDRYSNTDVFYVPEGQYFFLGD 194
Query: 315 NRNNSFDSH-NWGPLPIENIVGRSVFRYWPPSRVS 348
NR+ S DS N G +P EN + ++ F W ++++
Sbjct: 195 NRDRSNDSRVNLGFVPFENFIAKAQF-IWFSTKIT 228
>sp|Q8K9R0|LEP_BUCAP Signal peptidase I OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=lepB PE=3 SV=1
Length = 312
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 27/113 (23%)
Query: 180 VCSDDAKAAFTALT-------VSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFF 232
V ++ K F +L+ + F+ +SF+ EP IPS SM PTL +GD IL +K SY
Sbjct: 49 VILENKKCFFRSLSSLFPTFFIVFIIRSFIYEPFQIPSGSMMPTLLIGDFILVKKFSYGI 108
Query: 233 KR------------PEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVE 273
K P+ DIV+F+ P + +IKR+V GD ++
Sbjct: 109 KEPITNKTIIKMNLPQRGDIVVFKHP--------KNNIDYIKRVVGLPGDKIQ 153
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 27/35 (77%)
Query: 303 VVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRS 337
+VP+ F++GDNR+NS DS WG +P EN++G++
Sbjct: 251 IVPKNKYFMMGDNRDNSLDSRYWGFVPEENLLGKA 285
>sp|Q1RHA1|LEP_RICBR Signal peptidase I OS=Rickettsia bellii (strain RML369-C) GN=lepB
PE=3 SV=1
Length = 291
Score = 56.2 bits (134), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 65/225 (28%)
Query: 181 CSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY---------- 230
+ + K+ + ++ + + + E +P+ SM T+ DRI K SY
Sbjct: 39 TAQEWKSFILVVVIALMIRILIIESFVVPTGSMKATILENDRIFGTKYSYGYSNYSLSFF 98
Query: 231 ----------FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLL 280
F + PE DI+IFR P +IKR++ GD V++ +
Sbjct: 99 DFIHLFKGRIFARTPERGDIIIFRPPH-------EMNTRYIKRLIGLPGDKVQLIDDVIY 151
Query: 281 VN---------GVAQDED-----FILEPL-------AYEMDPVV---------------V 304
+N G+ E+ E L +Y++ PV+ V
Sbjct: 152 INDEKIERVESGIYVSEEGRKYLKFKETLPNGKTYFSYKLAPVLGIMFNDKYGNTDAFYV 211
Query: 305 PEGYVFVLGDNRNNSFDSH-NWGPLPIENIVGRSVFRYWPPSRVS 348
PEG F LGDNR+ S DS + G +P EN + ++ F W ++++
Sbjct: 212 PEGEYFFLGDNRDQSNDSRIDLGFVPFENFIAKAQF-IWFSTKIT 255
>sp|O74800|IMP1_SCHPO Mitochondrial inner membrane protease subunit 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=imp1 PE=3 SV=1
Length = 157
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 76/170 (44%), Gaps = 34/170 (20%)
Query: 187 AAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDR-ILAEKVSYFFKRP-EVSDIVIFR 244
AAF +LF+ + SM PTL+ G +L +K+ F R V D+V+
Sbjct: 15 AAFVHQIHEYLFQVQMTS-----GPSMMPTLNSGGEFVLLDKLHGRFARSCSVGDVVVSA 69
Query: 245 APPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPVVV 304
P S KRI+ GD + V +P + + +
Sbjct: 70 KPS-------DSKQHVCKRIIGMPGDTIYV------------------DPTSSN-KKITI 103
Query: 305 PEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWP-PSRVSDMLDD 353
P G+V++ GDN +S DS N+GP+P+ I + + R WP P +S++L+D
Sbjct: 104 PLGHVWLAGDNIAHSLDSRNYGPVPMGLIKAKVIARVWPHPHWMSNILND 153
>sp|A8GQT7|LEP_RICRS Signal peptidase I OS=Rickettsia rickettsii (strain Sheila Smith)
GN=lepB PE=1 SV=1
Length = 266
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 65/215 (30%)
Query: 191 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY-------------------- 230
+ ++ L + + EP ++P+ SM T+ D I + K SY
Sbjct: 24 VICIALLIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRI 83
Query: 231 FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNG--VAQDE 288
F + P+ DIV+FR P + +IKR++ GD +++ + +N + + E
Sbjct: 84 FAREPDRGDIVVFRPPNDMSV-------RYIKRLIGLPGDKIQLIDDVIYINDKKIERTE 136
Query: 289 --DFILEP-----------------LAYEMDPV---------------VVPEGYVFVLGD 314
+I E +Y++ P+ VPEG F LGD
Sbjct: 137 VGTYISEEGIKYLKFKETLPNGRTYFSYKLAPIYGVIYNDRYGNTDVFYVPEGKYFFLGD 196
Query: 315 NRNNSFDSH-NWGPLPIENIVGRSVFRYWPPSRVS 348
NR+ S DS N G +P EN + ++ F W ++++
Sbjct: 197 NRDQSNDSRVNLGFVPFENFIAKAQF-IWFSTKIT 230
>sp|Q92JB1|LEP_RICCN Signal peptidase I OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=lepB PE=3 SV=1
Length = 266
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 65/215 (30%)
Query: 191 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY-------------------- 230
+ ++ L + + EP ++P+ SM T+ D I + K SY
Sbjct: 24 VICIALLIRILIMEPFNVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRI 83
Query: 231 FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNG--VAQDE 288
F + P+ DIV+FR P + +IKR++ GD +++ + +N + + E
Sbjct: 84 FAREPDRGDIVVFRPPNDMSV-------RYIKRLIGLPGDKIQLIDDVIYINDKKIERTE 136
Query: 289 --DFILEP-----------------LAYEMDPV---------------VVPEGYVFVLGD 314
+I E +Y++ P+ VPEG F LGD
Sbjct: 137 VGTYISEEGIKYLKFKETLPNGRTYFSYKLAPIYGVIYNDRYSNTDVFYVPEGQYFFLGD 196
Query: 315 NRNNSFDSH-NWGPLPIENIVGRSVFRYWPPSRVS 348
NR+ S DS N G +P EN + ++ F W ++++
Sbjct: 197 NRDQSNDSRVNLGFVPFENFIAKAQF-IWFSTKIT 230
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 140,538,331
Number of Sequences: 539616
Number of extensions: 5993834
Number of successful extensions: 12009
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 11844
Number of HSP's gapped (non-prelim): 97
length of query: 365
length of database: 191,569,459
effective HSP length: 119
effective length of query: 246
effective length of database: 127,355,155
effective search space: 31329368130
effective search space used: 31329368130
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)