Query 017823
Match_columns 365
No_of_seqs 311 out of 1845
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 03:44:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017823.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017823hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 5.3E-33 1.1E-37 273.7 30.5 303 17-352 61-472 (485)
2 KOG0254 Predicted transporter 100.0 9.8E-31 2.1E-35 264.7 32.3 307 16-354 89-503 (513)
3 PRK10077 xylE D-xylose transpo 100.0 3.3E-29 7.2E-34 250.4 31.7 310 9-355 48-478 (479)
4 PRK10642 proline/glycine betai 100.0 1.4E-27 3.1E-32 240.2 24.8 260 22-320 63-386 (490)
5 TIGR00887 2A0109 phosphate:H+ 100.0 3.6E-27 7.7E-32 238.0 27.5 273 11-320 51-436 (502)
6 TIGR00879 SP MFS transporter, 100.0 7E-26 1.5E-30 223.9 30.7 276 11-320 66-427 (481)
7 PRK10406 alpha-ketoglutarate t 99.9 3.9E-26 8.4E-31 226.2 23.6 265 18-320 65-380 (432)
8 PRK09705 cynX putative cyanate 99.9 8.8E-26 1.9E-30 221.0 25.0 267 8-320 36-337 (393)
9 PF00083 Sugar_tr: Sugar (and 99.9 3.6E-31 7.7E-36 262.8 -14.2 301 14-348 44-450 (451)
10 TIGR01299 synapt_SV2 synaptic 99.9 1.1E-25 2.3E-30 234.3 25.1 121 9-156 195-315 (742)
11 PRK12307 putative sialic acid 99.9 2.4E-25 5.1E-30 219.3 24.9 268 9-320 46-365 (426)
12 COG2814 AraJ Arabinose efflux 99.9 2.6E-25 5.7E-30 213.5 24.1 267 7-320 39-343 (394)
13 PRK11551 putative 3-hydroxyphe 99.9 4.8E-25 1E-29 215.8 23.4 267 9-320 43-352 (406)
14 TIGR00898 2A0119 cation transp 99.9 3.9E-25 8.6E-30 222.8 23.4 288 8-344 116-504 (505)
15 PRK03545 putative arabinose tr 99.9 1.2E-24 2.7E-29 212.3 24.8 266 8-320 36-337 (390)
16 PRK09952 shikimate transporter 99.9 1.8E-24 3.8E-29 214.8 26.2 259 24-320 72-387 (438)
17 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1.3E-24 2.9E-29 214.0 22.4 272 7-320 34-377 (412)
18 PRK15075 citrate-proton sympor 99.9 2.7E-24 5.8E-29 213.1 24.1 272 10-320 44-375 (434)
19 TIGR00903 2A0129 major facilit 99.9 1.4E-24 2.9E-29 210.9 21.5 263 8-320 18-324 (368)
20 TIGR00890 2A0111 Oxalate/Forma 99.9 2E-24 4.4E-29 207.2 21.5 269 8-320 30-339 (377)
21 PRK05122 major facilitator sup 99.9 6E-24 1.3E-28 207.7 24.3 266 8-320 43-346 (399)
22 TIGR00891 2A0112 putative sial 99.9 9.5E-24 2.1E-28 205.2 24.1 270 8-320 39-372 (405)
23 cd06174 MFS The Major Facilita 99.9 2.2E-23 4.7E-28 197.7 25.6 265 10-320 28-309 (352)
24 PRK14995 methyl viologen resis 99.9 1E-23 2.2E-28 212.6 24.3 271 8-320 33-395 (495)
25 TIGR00900 2A0121 H+ Antiporter 99.9 6.7E-24 1.4E-28 203.0 21.5 267 10-320 28-345 (365)
26 PRK03893 putative sialic acid 99.9 3E-23 6.6E-28 208.4 23.5 269 9-320 48-410 (496)
27 TIGR00893 2A0114 d-galactonate 99.9 1.1E-23 2.3E-28 202.8 19.2 274 8-320 21-355 (399)
28 PRK09556 uhpT sugar phosphate 99.9 6.5E-24 1.4E-28 212.3 18.3 273 8-320 56-393 (467)
29 PRK11663 regulatory protein Uh 99.9 3.4E-23 7.3E-28 205.3 23.0 269 9-320 51-381 (434)
30 TIGR00711 efflux_EmrB drug res 99.9 1.1E-23 2.4E-28 210.6 19.1 271 9-320 30-392 (485)
31 PRK10091 MFS transport protein 99.9 6.1E-23 1.3E-27 200.0 23.7 220 8-258 30-284 (382)
32 PRK10489 enterobactin exporter 99.9 1.6E-23 3.4E-28 206.2 19.1 293 10-348 46-413 (417)
33 PF07690 MFS_1: Major Facilita 99.9 1.8E-23 3.9E-28 199.2 18.9 271 8-320 24-343 (352)
34 PRK10504 putative transporter; 99.9 4.3E-23 9.2E-28 206.2 21.9 270 9-320 38-397 (471)
35 PRK12382 putative transporter; 99.9 1.3E-22 2.7E-27 198.0 23.8 266 8-320 43-346 (392)
36 TIGR00710 efflux_Bcr_CflA drug 99.9 8.8E-23 1.9E-27 197.4 21.7 272 8-320 32-343 (385)
37 PRK03699 putative transporter; 99.9 1.8E-22 3.8E-27 197.5 22.7 219 8-256 34-288 (394)
38 TIGR00895 2A0115 benzoate tran 99.9 2E-22 4.3E-27 195.0 22.7 267 9-320 45-382 (398)
39 COG2271 UhpC Sugar phosphate p 99.9 5E-23 1.1E-27 196.1 17.2 271 8-320 56-390 (448)
40 PLN00028 nitrate transmembrane 99.9 1.2E-22 2.5E-27 203.9 20.9 203 8-239 63-318 (476)
41 PRK10213 nepI ribonucleoside t 99.9 3.4E-22 7.3E-27 195.8 23.4 263 8-316 47-344 (394)
42 PRK11102 bicyclomycin/multidru 99.9 4.5E-22 9.7E-27 192.6 23.7 270 9-320 19-330 (377)
43 KOG0252 Inorganic phosphate tr 99.9 9.1E-24 2E-28 202.2 10.4 303 12-351 80-514 (538)
44 TIGR00881 2A0104 phosphoglycer 99.9 1.4E-22 3E-27 194.6 18.3 273 8-320 22-354 (379)
45 TIGR00883 2A0106 metabolite-pr 99.9 4.5E-22 9.8E-27 192.0 21.8 269 13-320 27-356 (394)
46 TIGR00886 2A0108 nitrite extru 99.9 3.5E-22 7.7E-27 192.2 20.8 273 8-320 29-361 (366)
47 PRK10473 multidrug efflux syst 99.9 7.8E-22 1.7E-26 192.4 23.0 219 9-259 31-289 (392)
48 PRK15034 nitrate/nitrite trans 99.9 2.4E-21 5.2E-26 191.7 24.8 273 10-320 64-410 (462)
49 PRK15402 multidrug efflux syst 99.9 2.5E-21 5.4E-26 189.8 24.2 271 9-320 41-352 (406)
50 KOG1330 Sugar transporter/spin 99.9 4E-23 8.6E-28 198.5 11.1 275 7-320 59-393 (493)
51 TIGR00896 CynX cyanate transpo 99.9 2.6E-21 5.6E-26 186.3 23.8 267 8-320 27-330 (355)
52 TIGR00894 2A0114euk Na(+)-depe 99.9 1.1E-21 2.5E-26 195.8 21.9 200 10-239 70-327 (465)
53 PRK11273 glpT sn-glycerol-3-ph 99.9 2.7E-21 5.9E-26 192.7 24.0 266 12-320 59-391 (452)
54 PRK03633 putative MFS family t 99.9 5.4E-21 1.2E-25 186.1 25.6 263 10-317 35-326 (381)
55 PRK11043 putative transporter; 99.9 3.8E-21 8.1E-26 188.2 24.6 272 8-320 33-339 (401)
56 TIGR00899 2A0120 sugar efflux 99.9 3.3E-21 7.2E-26 185.9 23.9 267 8-320 25-331 (375)
57 PRK15403 multidrug efflux syst 99.9 2.1E-21 4.6E-26 191.4 22.5 204 8-242 43-287 (413)
58 TIGR00897 2A0118 polyol permea 99.9 6E-21 1.3E-25 187.2 25.4 270 9-320 41-358 (402)
59 TIGR00892 2A0113 monocarboxyla 99.9 1.3E-21 2.9E-26 195.2 20.7 266 9-320 47-377 (455)
60 KOG0255 Synaptic vesicle trans 99.9 1.2E-20 2.6E-25 191.3 27.6 289 9-350 111-508 (521)
61 KOG0253 Synaptic vesicle trans 99.9 2.1E-21 4.6E-26 181.2 18.4 264 9-320 106-478 (528)
62 TIGR00712 glpT glycerol-3-phos 99.9 8.9E-21 1.9E-25 188.2 20.0 271 11-320 56-389 (438)
63 TIGR00901 2A0125 AmpG-related 99.9 2.9E-20 6.3E-25 178.9 22.5 279 9-320 16-353 (356)
64 PRK11195 lysophospholipid tran 99.9 2.8E-20 6.2E-25 182.1 21.9 260 10-320 32-338 (393)
65 PRK10133 L-fucose transporter; 99.9 2.2E-20 4.7E-25 185.6 20.4 267 8-318 53-388 (438)
66 PRK09874 drug efflux system pr 99.9 4.1E-20 8.9E-25 180.6 21.8 257 18-320 56-355 (408)
67 TIGR00885 fucP L-fucose:H+ sym 99.9 3.4E-20 7.5E-25 182.6 21.3 269 8-320 30-365 (410)
68 KOG2532 Permease of the major 99.9 4.9E-20 1.1E-24 183.2 22.1 270 8-320 65-401 (466)
69 PRK15011 sugar efflux transpor 99.9 1.1E-19 2.4E-24 177.8 24.2 265 8-320 43-348 (393)
70 PRK11646 multidrug resistance 99.9 6.4E-20 1.4E-24 180.1 21.9 267 8-320 38-341 (400)
71 COG2223 NarK Nitrate/nitrite t 99.9 7.5E-20 1.6E-24 174.6 21.0 273 7-320 40-357 (417)
72 PRK11652 emrD multidrug resist 99.8 1.8E-19 3.9E-24 175.9 22.8 270 8-320 35-342 (394)
73 KOG2533 Permease of the major 99.8 1E-19 2.2E-24 181.6 20.4 212 7-246 72-350 (495)
74 TIGR00902 2A0127 phenyl propri 99.8 5.2E-19 1.1E-23 172.4 21.8 262 9-320 32-336 (382)
75 PRK08633 2-acyl-glycerophospho 99.8 3.2E-19 7E-24 196.3 22.6 264 15-320 46-366 (1146)
76 PRK10054 putative transporter; 99.8 3.3E-19 7.2E-24 174.7 18.0 265 8-318 35-340 (395)
77 PRK11010 ampG muropeptide tran 99.8 2.5E-18 5.5E-23 173.2 22.5 267 11-320 42-360 (491)
78 PRK06814 acylglycerophosphoeth 99.8 1.8E-18 3.8E-23 190.7 20.4 271 16-320 52-378 (1140)
79 PF06609 TRI12: Fungal trichot 99.8 5.4E-18 1.2E-22 171.5 21.4 261 15-320 77-449 (599)
80 PRK11128 putative 3-phenylprop 99.8 8.1E-18 1.8E-22 163.9 21.1 262 9-320 32-336 (382)
81 TIGR00792 gph sugar (Glycoside 99.8 6.1E-18 1.3E-22 167.0 18.9 272 8-320 27-362 (437)
82 TIGR00889 2A0110 nucleoside tr 99.8 2.3E-17 4.9E-22 163.0 22.2 264 9-319 31-351 (418)
83 PRK11902 ampG muropeptide tran 99.8 5.3E-17 1.2E-21 159.2 23.7 265 10-316 28-347 (402)
84 PF05977 MFS_3: Transmembrane 99.8 3.2E-17 7E-22 165.5 21.6 262 13-320 42-351 (524)
85 TIGR00806 rfc RFC reduced fola 99.8 2.3E-17 5E-22 161.6 17.6 265 9-320 54-397 (511)
86 KOG2504 Monocarboxylate transp 99.8 1.7E-17 3.7E-22 166.9 16.2 266 9-320 74-432 (509)
87 PRK10207 dipeptide/tripeptide 99.7 2.6E-16 5.6E-21 158.4 23.6 130 9-168 43-176 (489)
88 TIGR00805 oat sodium-independe 99.7 6.3E-18 1.4E-22 174.9 11.9 221 7-255 59-415 (633)
89 KOG2615 Permease of the major 99.7 2.9E-17 6.2E-22 154.6 13.0 265 13-320 65-396 (451)
90 PRK09528 lacY galactoside perm 99.7 2.6E-16 5.6E-21 155.2 19.3 261 8-316 38-355 (420)
91 TIGR00924 yjdL_sub1_fam amino 99.7 2.5E-15 5.3E-20 150.9 23.7 128 11-168 43-174 (475)
92 COG0738 FucP Fucose permease [ 99.7 1.7E-15 3.7E-20 144.1 20.8 258 8-308 40-356 (422)
93 TIGR00882 2A0105 oligosacchari 99.7 8.8E-16 1.9E-20 150.2 18.4 260 9-316 31-347 (396)
94 KOG3764 Vesicular amine transp 99.7 2.2E-16 4.7E-21 149.5 8.7 220 9-259 99-358 (464)
95 COG2807 CynX Cyanate permease 99.7 2.3E-14 5E-19 134.7 21.8 221 7-259 38-294 (395)
96 PRK09584 tppB putative tripept 99.6 5.4E-14 1.2E-18 142.1 23.2 130 9-168 50-183 (500)
97 PRK10429 melibiose:sodium symp 99.6 2.7E-14 5.8E-19 143.3 18.5 260 9-306 35-354 (473)
98 PRK09669 putative symporter Ya 99.6 2.6E-14 5.6E-19 142.1 17.6 259 8-306 37-349 (444)
99 TIGR02718 sider_RhtX_FptX side 99.6 6.4E-14 1.4E-18 136.7 20.0 272 10-320 30-348 (390)
100 PF03825 Nuc_H_symport: Nucleo 99.6 2.1E-13 4.5E-18 133.9 22.6 273 10-320 31-345 (400)
101 PTZ00207 hypothetical protein; 99.6 1E-13 2.2E-18 141.2 21.0 119 8-155 54-179 (591)
102 TIGR01301 GPH_sucrose GPH fami 99.6 3.4E-13 7.5E-18 134.5 23.4 282 10-320 33-426 (477)
103 PF13347 MFS_2: MFS/sugar tran 99.6 1.6E-13 3.5E-18 135.8 18.7 258 9-308 30-347 (428)
104 PF11700 ATG22: Vacuole efflux 99.5 2E-12 4.3E-17 129.5 24.8 271 16-320 70-424 (477)
105 PRK15462 dipeptide/tripeptide 99.5 1.2E-12 2.6E-17 131.1 23.0 130 9-168 38-171 (493)
106 PRK11462 putative transporter; 99.5 1.4E-12 3E-17 130.5 21.0 215 9-251 38-305 (460)
107 TIGR00788 fbt folate/biopterin 99.5 2.9E-13 6.3E-18 135.7 14.5 274 9-320 54-395 (468)
108 PRK09848 glucuronide transport 99.5 1.5E-12 3.2E-17 129.7 19.1 273 8-320 36-370 (448)
109 KOG4686 Predicted sugar transp 99.5 1.3E-13 2.9E-18 125.3 7.8 267 9-320 72-396 (459)
110 COG2270 Permeases of the major 99.4 3E-12 6.4E-17 122.9 15.7 264 15-320 57-385 (438)
111 COG2211 MelB Na+/melibiose sym 99.4 2.6E-11 5.5E-16 119.4 20.8 258 8-306 40-357 (467)
112 TIGR00880 2_A_01_02 Multidrug 99.3 5.2E-12 1.1E-16 103.5 6.8 117 22-168 4-120 (141)
113 TIGR01272 gluP glucose/galacto 99.3 1.2E-10 2.5E-15 110.7 16.7 210 64-317 5-270 (310)
114 KOG2563 Permease of the major 99.2 1.4E-10 3E-15 112.1 14.4 272 10-320 74-403 (480)
115 COG3104 PTR2 Dipeptide/tripept 99.2 1.2E-09 2.6E-14 107.2 18.6 274 11-320 56-438 (498)
116 PF01306 LacY_symp: LacY proto 99.2 1.1E-09 2.4E-14 106.8 16.4 265 10-320 37-356 (412)
117 PF05631 DUF791: Protein of un 99.1 2.5E-09 5.4E-14 101.5 16.0 208 9-248 62-318 (354)
118 TIGR00890 2A0111 Oxalate/Forma 99.1 6.7E-10 1.5E-14 106.3 10.9 130 9-168 233-364 (377)
119 cd06174 MFS The Major Facilita 99.1 9.5E-10 2.1E-14 104.0 10.7 128 11-168 206-334 (352)
120 TIGR00891 2A0112 putative sial 99.0 4.7E-09 1E-13 101.8 14.2 130 176-320 15-144 (405)
121 PRK15011 sugar efflux transpor 99.0 3.1E-09 6.7E-14 104.0 12.0 129 9-168 245-373 (393)
122 TIGR00889 2A0110 nucleoside tr 99.0 1.7E-09 3.7E-14 106.9 10.0 128 14-168 249-384 (418)
123 PRK11663 regulatory protein Uh 99.0 9.5E-09 2.1E-13 102.0 14.5 117 189-320 39-155 (434)
124 TIGR00710 efflux_Bcr_CflA drug 99.0 7.8E-09 1.7E-13 99.8 13.3 133 173-320 5-137 (385)
125 TIGR00895 2A0115 benzoate tran 99.0 9.8E-09 2.1E-13 99.1 14.0 118 188-320 32-149 (398)
126 TIGR01299 synapt_SV2 synaptic 99.0 2.1E-09 4.5E-14 112.9 9.7 112 18-156 597-708 (742)
127 PF03209 PUCC: PUCC protein; 99.0 5.2E-08 1.1E-12 94.0 18.2 267 10-320 9-345 (403)
128 PRK09528 lacY galactoside perm 99.0 2.9E-09 6.2E-14 105.0 9.8 127 12-168 258-385 (420)
129 TIGR00893 2A0114 d-galactonate 98.9 6.1E-09 1.3E-13 99.9 11.7 116 190-320 11-126 (399)
130 PRK10054 putative transporter; 98.9 1.6E-08 3.4E-13 99.3 13.8 126 180-320 14-140 (395)
131 TIGR02332 HpaX 4-hydroxyphenyl 98.9 2.7E-08 5.9E-13 98.1 14.9 132 174-320 9-140 (412)
132 KOG2816 Predicted transporter 98.9 6.4E-08 1.4E-12 96.5 17.3 253 19-320 65-374 (463)
133 TIGR00881 2A0104 phosphoglycer 98.9 5.1E-09 1.1E-13 100.3 8.9 115 190-319 12-126 (379)
134 PRK12307 putative sialic acid 98.9 6E-08 1.3E-12 95.5 16.3 130 176-320 21-150 (426)
135 TIGR00899 2A0120 sugar efflux 98.9 1.2E-08 2.7E-13 98.2 11.0 129 9-168 228-356 (375)
136 PRK10473 multidrug efflux syst 98.9 1.7E-08 3.7E-13 98.4 12.0 133 173-320 3-135 (392)
137 PRK11551 putative 3-hydroxyphe 98.9 1.3E-08 2.9E-13 99.5 11.2 121 11-158 250-370 (406)
138 PRK12382 putative transporter; 98.9 6.2E-09 1.4E-13 101.5 8.6 122 17-168 250-371 (392)
139 PRK09874 drug efflux system pr 98.9 1.4E-08 3E-13 99.2 10.5 121 18-168 260-380 (408)
140 PRK05122 major facilitator sup 98.8 1.3E-08 2.8E-13 99.4 10.1 122 17-168 250-371 (399)
141 PRK11273 glpT sn-glycerol-3-ph 98.8 5.4E-08 1.2E-12 97.1 14.6 117 192-320 48-164 (452)
142 TIGR00900 2A0121 H+ Antiporter 98.8 1.4E-08 3E-13 96.9 9.7 120 11-157 242-362 (365)
143 TIGR00883 2A0106 metabolite-pr 98.8 1.9E-08 4.1E-13 96.9 9.8 123 9-158 248-375 (394)
144 TIGR00902 2A0127 phenyl propri 98.8 3E-08 6.6E-13 96.6 11.3 121 10-158 234-355 (382)
145 PRK10091 MFS transport protein 98.8 1E-07 2.2E-12 92.9 13.7 118 188-320 18-135 (382)
146 PRK03893 putative sialic acid 98.8 3E-08 6.5E-13 99.7 10.1 129 9-167 304-434 (496)
147 TIGR00712 glpT glycerol-3-phos 98.8 6.4E-08 1.4E-12 96.1 12.3 117 192-320 46-162 (438)
148 PF03137 OATP: Organic Anion T 98.8 1.4E-09 3E-14 110.6 -0.0 220 6-253 28-388 (539)
149 PRK10213 nepI ribonucleoside t 98.8 1.9E-07 4.2E-12 91.5 15.1 112 194-320 41-152 (394)
150 KOG2325 Predicted transporter/ 98.8 9.4E-08 2E-12 94.7 12.8 122 9-158 64-191 (488)
151 TIGR00711 efflux_EmrB drug res 98.8 8.8E-08 1.9E-12 95.8 12.8 120 186-320 15-134 (485)
152 PRK10077 xylE D-xylose transpo 98.8 2.8E-07 6E-12 92.2 16.4 114 204-320 51-164 (479)
153 PRK03699 putative transporter; 98.8 1.7E-07 3.6E-12 91.7 14.5 116 189-319 23-138 (394)
154 PRK03633 putative MFS family t 98.7 4E-08 8.6E-13 95.6 9.8 125 11-168 230-354 (381)
155 PRK03545 putative arabinose tr 98.7 7.3E-08 1.6E-12 94.0 11.5 128 9-168 234-362 (390)
156 PRK10642 proline/glycine betai 98.7 7.5E-08 1.6E-12 97.1 11.7 119 10-156 280-402 (490)
157 PRK10489 enterobactin exporter 98.7 4.3E-08 9.4E-13 96.5 9.4 121 10-157 253-373 (417)
158 COG2814 AraJ Arabinose efflux 98.7 2.3E-07 5.1E-12 89.9 14.1 131 175-320 15-145 (394)
159 PRK09556 uhpT sugar phosphate 98.7 6.1E-08 1.3E-12 97.1 10.4 122 9-157 287-411 (467)
160 PRK11102 bicyclomycin/multidru 98.7 5.6E-08 1.2E-12 93.9 9.5 113 193-320 11-123 (377)
161 PF07690 MFS_1: Major Facilita 98.7 9.5E-08 2.1E-12 90.7 10.4 116 190-320 13-129 (352)
162 KOG3098 Uncharacterized conser 98.7 1.6E-06 3.5E-11 85.7 19.2 265 22-316 56-392 (461)
163 PRK14995 methyl viologen resis 98.7 2.7E-07 5.9E-12 93.2 14.0 131 175-320 8-139 (495)
164 KOG1330 Sugar transporter/spin 98.7 1.6E-07 3.4E-12 91.6 11.0 115 191-320 51-165 (493)
165 TIGR00897 2A0118 polyol permea 98.6 4E-07 8.6E-12 89.4 13.7 122 188-320 28-149 (402)
166 PRK15402 multidrug efflux syst 98.6 6.2E-07 1.3E-11 87.9 15.0 114 192-320 32-145 (406)
167 PRK10504 putative transporter; 98.6 6.5E-07 1.4E-11 89.5 15.0 125 181-320 18-142 (471)
168 TIGR00886 2A0108 nitrite extru 98.6 5.4E-07 1.2E-11 86.5 13.6 119 186-319 14-133 (366)
169 PRK11128 putative 3-phenylprop 98.6 2.6E-07 5.6E-12 90.0 11.3 121 10-158 234-355 (382)
170 PRK15403 multidrug efflux syst 98.6 7.5E-07 1.6E-11 87.9 14.3 111 195-320 38-148 (413)
171 PRK09952 shikimate transporter 98.6 3.5E-07 7.6E-12 90.9 11.6 131 10-168 280-415 (438)
172 PRK11652 emrD multidrug resist 98.6 1.1E-06 2.4E-11 85.6 14.8 112 194-320 29-140 (394)
173 TIGR00879 SP MFS transporter, 98.6 2.6E-07 5.7E-12 91.1 10.3 128 10-167 313-451 (481)
174 TIGR00882 2A0105 oligosacchari 98.6 2.9E-07 6.4E-12 89.9 10.2 127 12-168 250-377 (396)
175 PLN00028 nitrate transmembrane 98.6 1.6E-06 3.5E-11 87.2 15.8 114 190-319 53-166 (476)
176 PRK11646 multidrug resistance 98.6 1E-06 2.2E-11 86.5 14.0 118 188-320 25-143 (400)
177 TIGR00887 2A0109 phosphate:H+ 98.6 1.7E-06 3.6E-11 87.6 15.9 106 206-320 54-159 (502)
178 TIGR00892 2A0113 monocarboxyla 98.6 1.6E-07 3.5E-12 93.9 8.3 130 10-168 270-403 (455)
179 TIGR00901 2A0125 AmpG-related 98.6 2.3E-07 5.1E-12 89.1 9.0 105 11-142 239-355 (356)
180 COG2271 UhpC Sugar phosphate p 98.5 4.1E-07 9E-12 87.8 10.0 137 169-320 25-161 (448)
181 KOG3626 Organic anion transpor 98.5 3.4E-07 7.3E-12 94.5 9.6 221 7-255 123-477 (735)
182 TIGR00898 2A0119 cation transp 98.5 3.5E-07 7.6E-12 92.3 9.6 111 195-320 111-224 (505)
183 PRK11043 putative transporter; 98.5 1.8E-06 3.9E-11 84.4 14.1 108 196-318 29-136 (401)
184 TIGR00896 CynX cyanate transpo 98.5 4.8E-07 1E-11 87.0 9.7 122 11-160 227-350 (355)
185 COG0477 ProP Permeases of the 98.5 7E-07 1.5E-11 81.3 9.5 125 16-168 39-167 (338)
186 PF11700 ATG22: Vacuole efflux 98.5 9.9E-07 2.1E-11 88.6 11.4 125 9-160 310-444 (477)
187 TIGR00903 2A0129 major facilit 98.5 2.4E-06 5.2E-11 83.2 13.3 112 193-320 11-122 (368)
188 PF03092 BT1: BT1 family; Int 98.4 1.1E-06 2.3E-11 87.5 10.6 123 7-157 16-149 (433)
189 PF05977 MFS_3: Transmembrane 98.4 6.4E-07 1.4E-11 90.9 9.0 122 9-157 247-368 (524)
190 PRK15075 citrate-proton sympor 98.4 1.1E-06 2.3E-11 87.3 10.1 122 10-158 268-394 (434)
191 TIGR00806 rfc RFC reduced fola 98.4 8E-06 1.7E-10 81.0 15.8 131 172-320 27-158 (511)
192 TIGR00894 2A0114euk Na(+)-depe 98.4 1.5E-06 3.3E-11 86.8 10.9 106 202-320 70-175 (465)
193 PRK09705 cynX putative cyanate 98.4 3.5E-06 7.6E-11 82.5 12.9 115 190-320 26-140 (393)
194 TIGR00792 gph sugar (Glycoside 98.4 1.8E-06 3.9E-11 85.1 11.0 117 14-157 255-379 (437)
195 TIGR02718 sider_RhtX_FptX side 98.4 1.9E-06 4.2E-11 84.0 10.8 129 10-168 237-373 (390)
196 TIGR00924 yjdL_sub1_fam amino 98.4 1.6E-06 3.5E-11 87.3 10.5 120 186-320 23-149 (475)
197 PF05978 UNC-93: Ion channel r 98.4 3.7E-06 8.1E-11 71.5 10.8 125 6-158 27-151 (156)
198 PRK15034 nitrate/nitrite trans 98.4 1.5E-05 3.2E-10 79.6 16.3 106 202-318 64-169 (462)
199 PRK11902 ampG muropeptide tran 98.4 3.1E-06 6.8E-11 83.0 11.2 121 186-320 12-138 (402)
200 PF01770 Folate_carrier: Reduc 98.3 7.5E-05 1.6E-09 73.0 20.2 267 10-320 34-384 (412)
201 PRK11010 ampG muropeptide tran 98.3 3.5E-06 7.7E-11 85.1 11.6 129 10-168 252-385 (491)
202 COG2270 Permeases of the major 98.3 1.3E-06 2.8E-11 84.5 7.8 125 9-160 281-405 (438)
203 PRK08633 2-acyl-glycerophospho 98.3 1.7E-06 3.7E-11 95.8 9.8 120 10-156 262-382 (1146)
204 KOG4332 Predicted sugar transp 98.3 6.1E-06 1.3E-10 75.3 11.3 266 9-316 65-384 (454)
205 PF06813 Nodulin-like: Nodulin 98.3 3.2E-05 6.9E-10 71.0 16.3 120 8-156 29-155 (250)
206 KOG0569 Permease of the major 98.3 6.2E-06 1.4E-10 82.3 12.2 97 213-320 64-160 (485)
207 TIGR00885 fucP L-fucose:H+ sym 98.3 9.2E-06 2E-10 80.2 12.4 121 188-320 18-138 (410)
208 PF06963 FPN1: Ferroportin1 (F 98.3 0.0017 3.7E-08 64.4 27.8 141 193-338 278-419 (432)
209 TIGR01301 GPH_sucrose GPH fami 98.2 1.5E-05 3.1E-10 80.1 13.3 142 173-317 5-157 (477)
210 PRK10406 alpha-ketoglutarate t 98.2 9E-06 1.9E-10 80.6 11.3 119 10-155 273-396 (432)
211 PRK11195 lysophospholipid tran 98.2 7.8E-06 1.7E-10 80.1 10.6 120 9-156 234-354 (393)
212 PRK15462 dipeptide/tripeptide 98.2 9E-06 2E-10 81.9 11.2 134 172-320 9-146 (493)
213 KOG0255 Synaptic vesicle trans 98.2 9E-06 1.9E-10 82.6 11.2 101 201-316 111-211 (521)
214 PRK10133 L-fucose transporter; 98.2 1.8E-05 3.9E-10 78.8 12.7 121 188-320 41-161 (438)
215 TIGR01272 gluP glucose/galacto 98.2 9.1E-06 2E-10 77.2 10.1 118 10-157 172-289 (310)
216 PTZ00207 hypothetical protein; 98.1 1.8E-05 4E-10 81.2 11.2 121 189-320 43-163 (591)
217 PRK10207 dipeptide/tripeptide 98.1 1.8E-05 3.9E-10 79.9 11.1 135 171-320 13-151 (489)
218 PRK06814 acylglycerophosphoeth 98.1 6.3E-06 1.4E-10 91.5 8.4 121 9-156 254-394 (1140)
219 TIGR00880 2_A_01_02 Multidrug 98.1 2.3E-05 5E-10 63.5 9.7 91 216-320 5-95 (141)
220 KOG2615 Permease of the major 98.1 9.4E-06 2E-10 77.6 8.1 97 208-320 68-164 (451)
221 TIGR00805 oat sodium-independe 98.1 1E-05 2.2E-10 84.4 8.9 143 176-320 36-216 (633)
222 PRK09848 glucuronide transport 98.1 2E-05 4.2E-10 78.5 10.4 120 10-156 258-386 (448)
223 KOG0253 Synaptic vesicle trans 98.0 1.1E-05 2.5E-10 76.7 7.3 101 26-153 391-491 (528)
224 PF13347 MFS_2: MFS/sugar tran 98.0 2.9E-05 6.2E-10 76.9 10.6 114 16-156 260-382 (428)
225 PF00083 Sugar_tr: Sugar (and 98.0 1.4E-07 3.1E-12 93.6 -6.7 99 210-320 48-146 (451)
226 KOG4686 Predicted sugar transp 98.0 2.2E-05 4.7E-10 72.4 7.7 128 8-164 292-420 (459)
227 COG2223 NarK Nitrate/nitrite t 98.0 6.1E-05 1.3E-09 72.9 10.9 110 196-318 37-146 (417)
228 PF03825 Nuc_H_symport: Nucleo 97.9 0.00012 2.6E-09 72.1 12.8 119 13-158 240-364 (400)
229 KOG3762 Predicted transporter 97.9 2.6E-05 5.6E-10 77.6 7.5 116 190-320 388-503 (618)
230 KOG0254 Predicted transporter 97.9 0.00012 2.5E-09 74.5 12.5 95 211-320 92-186 (513)
231 PF06813 Nodulin-like: Nodulin 97.9 0.0001 2.3E-09 67.6 10.6 123 187-320 16-139 (250)
232 PRK09669 putative symporter Ya 97.9 0.00012 2.7E-09 72.7 11.5 115 16-157 264-387 (444)
233 PRK10429 melibiose:sodium symp 97.8 0.00014 3E-09 73.1 11.2 116 14-156 264-391 (473)
234 KOG2532 Permease of the major 97.8 0.0001 2.2E-09 73.8 9.8 106 202-320 67-172 (466)
235 KOG2504 Monocarboxylate transp 97.8 5.7E-05 1.2E-09 76.5 7.6 124 10-160 327-452 (509)
236 TIGR00926 2A1704 Peptide:H+ sy 97.8 0.0051 1.1E-07 64.3 21.9 133 9-168 16-164 (654)
237 TIGR00788 fbt folate/biopterin 97.7 6.1E-05 1.3E-09 75.7 7.0 123 9-158 281-413 (468)
238 PRK09584 tppB putative tripept 97.7 0.00012 2.7E-09 74.1 9.0 110 18-154 318-440 (500)
239 PF06609 TRI12: Fungal trichot 97.7 0.00028 6.1E-09 72.4 11.5 108 196-320 67-174 (599)
240 PF12832 MFS_1_like: MFS_1 lik 97.7 0.00018 3.9E-09 53.6 7.2 65 183-248 10-74 (77)
241 PF01306 LacY_symp: LacY proto 97.7 0.0001 2.2E-09 72.3 7.3 116 14-156 257-373 (412)
242 KOG0637 Sucrose transporter an 97.6 6.9E-05 1.5E-09 73.2 4.8 119 10-155 61-202 (498)
243 PF03209 PUCC: PUCC protein; 97.5 0.00091 2E-08 65.0 11.0 122 9-157 237-362 (403)
244 KOG0252 Inorganic phosphate tr 97.5 0.00047 1E-08 67.7 8.4 102 205-315 81-183 (538)
245 PF06779 DUF1228: Protein of u 97.4 0.00072 1.6E-08 51.2 7.3 64 9-72 20-83 (85)
246 KOG3764 Vesicular amine transp 97.4 9.3E-05 2E-09 71.3 2.6 123 15-167 305-435 (464)
247 KOG3762 Predicted transporter 97.2 0.00037 7.9E-09 69.6 5.1 117 13-156 403-520 (618)
248 PF05631 DUF791: Protein of un 97.2 0.0046 1E-07 59.2 11.9 83 169-256 34-116 (354)
249 KOG2533 Permease of the major 97.2 0.0054 1.2E-07 62.0 13.0 105 201-320 74-178 (495)
250 PF12832 MFS_1_like: MFS_1 lik 97.2 0.0011 2.4E-08 49.4 5.8 46 10-55 29-74 (77)
251 COG2211 MelB Na+/melibiose sym 97.2 0.0046 9.9E-08 61.6 11.9 118 12-156 268-394 (467)
252 PRK11462 putative transporter; 97.1 0.0042 9.2E-08 62.3 11.1 114 16-156 263-385 (460)
253 COG2807 CynX Cyanate permease 97.1 0.0039 8.4E-08 59.7 9.7 129 10-168 237-367 (395)
254 PF02487 CLN3: CLN3 protein; 97.0 0.065 1.4E-06 52.5 18.4 71 18-88 61-131 (402)
255 TIGR00769 AAA ADP/ATP carrier 97.0 0.18 3.9E-06 50.7 21.3 137 15-156 42-189 (472)
256 PF05978 UNC-93: Ion channel r 97.0 0.03 6.4E-07 47.7 13.5 120 185-320 8-133 (156)
257 KOG2816 Predicted transporter 97.0 0.0052 1.1E-07 61.5 10.1 123 6-156 267-390 (463)
258 COG0738 FucP Fucose permease [ 96.8 0.02 4.4E-07 55.6 12.5 71 188-259 28-98 (422)
259 KOG2325 Predicted transporter/ 96.8 0.0063 1.4E-07 60.8 9.1 111 198-319 59-172 (488)
260 COG3104 PTR2 Dipeptide/tripept 96.7 0.011 2.3E-07 58.9 9.7 125 171-308 20-149 (498)
261 KOG3810 Micronutrient transpor 96.5 0.024 5.2E-07 54.0 10.5 250 27-320 53-370 (433)
262 KOG2563 Permease of the major 95.9 0.2 4.4E-06 49.5 13.6 140 170-320 40-184 (480)
263 PF06779 DUF1228: Protein of u 95.3 0.11 2.3E-06 39.4 7.4 66 193-259 12-77 (85)
264 PF01770 Folate_carrier: Reduc 94.9 0.76 1.6E-05 45.3 13.8 131 172-320 5-137 (412)
265 PF03137 OATP: Organic Anion T 94.8 0.0082 1.8E-07 61.4 0.2 134 186-320 16-185 (539)
266 PF00854 PTR2: POT family; In 93.9 0.067 1.4E-06 51.9 4.3 92 47-168 2-105 (372)
267 PF02487 CLN3: CLN3 protein; 93.5 0.32 6.9E-06 47.8 8.1 111 15-156 280-395 (402)
268 KOG1237 H+/oligopeptide sympor 92.7 2.2 4.7E-05 44.1 13.2 129 10-168 67-227 (571)
269 PF06963 FPN1: Ferroportin1 (F 92.6 1.3 2.9E-05 44.0 11.3 118 12-156 289-416 (432)
270 COG0477 ProP Permeases of the 92.6 1.2 2.6E-05 39.8 10.2 116 191-319 20-138 (338)
271 KOG3574 Acetyl-CoA transporter 92.4 1.5 3.2E-05 42.8 10.6 96 33-155 80-192 (510)
272 PF03219 TLC: TLC ATP/ADP tran 92.3 14 0.00031 37.4 22.0 138 15-157 57-205 (491)
273 KOG3626 Organic anion transpor 91.9 0.59 1.3E-05 49.2 7.9 148 172-320 96-281 (735)
274 KOG0637 Sucrose transporter an 91.8 0.2 4.2E-06 49.7 4.1 146 172-320 32-187 (498)
275 TIGR00926 2A1704 Peptide:H+ sy 91.2 3 6.6E-05 43.8 12.6 64 195-259 10-74 (654)
276 PF13000 Acatn: Acetyl-coenzym 90.9 20 0.00043 36.4 18.5 40 117-156 139-178 (544)
277 KOG3098 Uncharacterized conser 87.7 6.1 0.00013 39.6 11.0 98 213-325 54-151 (461)
278 PRK03612 spermidine synthase; 87.5 5.8 0.00013 40.6 11.1 37 11-47 45-81 (521)
279 KOG3097 Predicted membrane pro 87.3 14 0.00029 35.5 12.3 63 25-88 67-129 (390)
280 PF03092 BT1: BT1 family; Int 83.7 1.7 3.8E-05 43.2 5.1 119 12-157 251-379 (433)
281 TIGR00769 AAA ADP/ATP carrier 82.9 23 0.00049 35.8 12.6 112 208-320 43-173 (472)
282 KOG3574 Acetyl-CoA transporter 82.7 26 0.00056 34.5 12.1 83 171-259 30-117 (510)
283 KOG1479 Nucleoside transporter 76.3 83 0.0018 31.1 14.3 46 190-237 35-80 (406)
284 PF13000 Acatn: Acetyl-coenzym 67.2 40 0.00086 34.3 9.3 64 194-258 21-88 (544)
285 TIGR00939 2a57 Equilibrative N 67.0 21 0.00046 35.6 7.6 63 67-156 370-432 (437)
286 KOG4332 Predicted sugar transp 62.6 4.7 0.0001 37.7 1.8 54 188-242 52-105 (454)
287 TIGR00939 2a57 Equilibrative N 58.2 2E+02 0.0044 28.6 19.2 105 213-320 311-416 (437)
288 KOG1479 Nucleoside transporter 57.2 52 0.0011 32.5 8.0 114 15-155 281-402 (406)
289 KOG3880 Predicted small molecu 51.6 29 0.00062 33.2 5.0 113 17-156 289-402 (409)
290 PF01733 Nucleoside_tran: Nucl 45.8 5.9 0.00013 37.4 -0.4 108 21-155 187-307 (309)
291 PF07672 MFS_Mycoplasma: Mycop 42.5 2.8E+02 0.0061 25.7 12.2 23 128-150 2-24 (267)
292 COG5336 Uncharacterized protei 42.4 77 0.0017 25.1 5.3 27 17-43 43-69 (116)
293 PF07672 MFS_Mycoplasma: Mycop 40.7 1.9E+02 0.0041 26.8 8.5 64 20-83 145-218 (267)
294 KOG1237 H+/oligopeptide sympor 39.2 4.6E+02 0.01 27.2 14.0 65 195-260 60-125 (571)
295 PF11947 DUF3464: Protein of u 36.4 2.4E+02 0.0051 23.9 7.8 33 116-148 114-146 (153)
296 COG4769 Predicted membrane pro 33.8 53 0.0012 28.0 3.5 50 25-80 82-131 (181)
297 PF02632 BioY: BioY family; I 33.0 1.7E+02 0.0038 24.4 6.5 40 24-63 61-100 (148)
298 COG1268 BioY Uncharacterized c 31.3 1.9E+02 0.0041 25.3 6.6 22 24-45 90-111 (184)
299 KOG2601 Iron transporter [Inor 30.7 3E+02 0.0064 27.4 8.3 29 27-55 74-102 (503)
300 KOG3810 Micronutrient transpor 29.1 65 0.0014 31.4 3.6 93 18-137 273-367 (433)
301 COG3202 ATP/ADP translocase [E 27.1 6.9E+02 0.015 25.5 20.0 140 15-158 60-210 (509)
302 COG5336 Uncharacterized protei 22.5 4E+02 0.0087 21.2 6.7 35 213-247 46-81 (116)
303 KOG4830 Predicted sugar transp 22.1 86 0.0019 29.3 2.9 47 194-241 38-93 (412)
304 PF11947 DUF3464: Protein of u 21.8 2.7E+02 0.0059 23.5 5.7 32 231-263 56-87 (153)
305 PF11299 DUF3100: Protein of u 21.7 72 0.0016 28.9 2.3 97 8-154 131-228 (241)
306 PF02990 EMP70: Endomembrane p 20.3 9.3E+02 0.02 24.6 10.5 8 161-168 244-251 (521)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.3e-33 Score=273.70 Aligned_cols=303 Identities=27% Similarity=0.450 Sum_probs=264.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHhhcchhhhhhhhhhh
Q 017823 17 LLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA---FNIYMLIFGRVLLGVGIGFANQVSVWL 93 (365)
Q Consensus 17 ~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a---~~~~~~~~~r~l~G~~~g~~~~~~~~~ 93 (365)
..+.+.+++.+|.++|+++.+.++||+|||..+.++.++..++.++..++ +++.+++++|++.|+..|....
T Consensus 61 lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~----- 135 (485)
T KOG0569|consen 61 LWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTG----- 135 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHH-----
Confidence 46677779999999999999999999999999999999998888887776 7889999999999999999999
Q ss_pred hhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH-----
Q 017823 94 FYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL----- 168 (365)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f----- 168 (365)
..+.|+.|.+|++.||......+.+..+|.+++..++..-.-. +...|++.+
T Consensus 136 ----------------------~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilG-t~~~W~~l~~~~~i 192 (485)
T KOG0569|consen 136 ----------------------LVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLG-TEDLWPYLLAFPLI 192 (485)
T ss_pred ----------------------HHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcC-CCcchHHHHHHHHH
Confidence 9999999999999999999999999999999998887544322 224688877
Q ss_pred -------------------------------------------------------------------------HhHHHHH
Q 017823 169 -------------------------------------------------------------------------KYRLQFV 175 (365)
Q Consensus 169 -------------------------------------------------------------------------~~~~~~~ 175 (365)
..|++..
T Consensus 193 ~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~ 272 (485)
T KOG0569|consen 193 PALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLL 272 (485)
T ss_pred HHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHH
Confidence 4567788
Q ss_pred HHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHH
Q 017823 176 MAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVM 255 (365)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~ 255 (365)
..+.+.+.+++++.+.+.+|...++++.|++++++. +.....++...+.++++.++.||.|||++++.+..++.+..+.
T Consensus 273 i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~-~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~ 351 (485)
T KOG0569|consen 273 IGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQ-YANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLL 351 (485)
T ss_pred HHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999999999999999 9999999999999999999999999999999999999999988
Q ss_pred HHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH---------------
Q 017823 256 IGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA--------------- 320 (365)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~--------------- 320 (365)
+......+.... +.-.+..+++.+.+..+++.+.+|++|.+.+|++|++.|++++++...+
T Consensus 352 ~~~~~~l~~~~~----~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l 427 (485)
T KOG0569|consen 352 MSIALFLSNSFG----SWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPL 427 (485)
T ss_pred HHHHHHHHHHhh----hHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888755432111 2334567888999999999999999999999999999999999999888
Q ss_pred ----H--HHH---H----HHHHHHhhcccCCCCChHHHHHHHccC
Q 017823 321 ----G--VFF---F----LTTFMHFFLPETKNVPIELMDKCWREH 352 (365)
Q Consensus 321 ----~--~f~---~----~~~~~~~~~~et~~~~~~~~~~~~~~~ 352 (365)
+ .|. + ..+..++++||||+|+.+|+.++.+++
T Consensus 428 ~~~~g~~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~~~ 472 (485)
T KOG0569|consen 428 QNVIGPYVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELEKR 472 (485)
T ss_pred HHHhcchhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHHhC
Confidence 1 111 1 566778889999999999998888766
No 2
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=9.8e-31 Score=264.68 Aligned_cols=307 Identities=33% Similarity=0.617 Sum_probs=267.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhhhhhh
Q 017823 16 QLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSVWLFY 95 (365)
Q Consensus 16 ~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~~~~~ 95 (365)
++.+++.++..++.++++++.|+++|++|||+.++++.+++.++.++.++++|+++++++|++.|+|.|....
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~------- 161 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASV------- 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhh-------
Confidence 5679999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH-------
Q 017823 96 FSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL------- 168 (365)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f------- 168 (365)
..+.|++|..|++.||...+..+....+|.+++..++....+. + ++||..+
T Consensus 162 --------------------~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~-~-~~Wr~~~~~~~i~~ 219 (513)
T KOG0254|consen 162 --------------------LAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKV-Y-AGWRIPLGLALIPA 219 (513)
T ss_pred --------------------cchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC-C-ccHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998888877654 2 6899887
Q ss_pred -----------------------------------------------------------------------HhHHHHHHH
Q 017823 169 -----------------------------------------------------------------------KYRLQFVMA 177 (365)
Q Consensus 169 -----------------------------------------------------------------------~~~~~~~~~ 177 (365)
..+++....
T Consensus 220 ~~~~~~~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~ 299 (513)
T KOG0254|consen 220 VILALGMLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIG 299 (513)
T ss_pred HHHHHHHHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHH
Confidence 145567788
Q ss_pred HHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHH
Q 017823 178 ILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIG 257 (365)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~ 257 (365)
..+..++++++++...+|.+.+++..|.+.+. . ....+.++...+++.++.++.||+|||+.++.+...+.++.++++
T Consensus 300 ~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~-~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~ 377 (513)
T KOG0254|consen 300 LLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-F-LASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILA 377 (513)
T ss_pred HHHHHHHHHhCCceEEeehHHHHHhcCCCCch-H-HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999999999999988665 4 677888999999999999999999999999999999999999998
Q ss_pred HHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH-----------------
Q 017823 258 SIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA----------------- 320 (365)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~----------------- 320 (365)
........+. +......+..++..+++...++.+++|++|.+.+|.+|.+.|+++.++....
T Consensus 378 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~ 456 (513)
T KOG0254|consen 378 VVGVFALYYP-NSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITE 456 (513)
T ss_pred HHHHHhccCC-CcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8754432211 1234557788888888999999999999999999999999999999999888
Q ss_pred -----HHHHH-------HHH-HHHhhcccCCCCChHHHHHHHccCCc
Q 017823 321 -----GVFFF-------LTT-FMHFFLPETKNVPIELMDKCWREHWF 354 (365)
Q Consensus 321 -----~~f~~-------~~~-~~~~~~~et~~~~~~~~~~~~~~~~~ 354 (365)
+.|.. ... +..+++||||+++++|+++.+++...
T Consensus 457 ~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~~~~ 503 (513)
T KOG0254|consen 457 ALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEEGIK 503 (513)
T ss_pred hccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHcCCc
Confidence 11111 233 56678999999999999987765533
No 3
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.97 E-value=3.3e-29 Score=250.38 Aligned_cols=310 Identities=27% Similarity=0.481 Sum_probs=234.8
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh------------hhHHHHHHHH
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA------------FNIYMLIFGR 76 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a------------~~~~~~~~~r 76 (365)
.+++.++.+.+++.+++.++..+++++.|+++||+|||++++.+..++.++.+..+++ ++++.++++|
T Consensus 48 ~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R 127 (479)
T PRK10077 48 LSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYR 127 (479)
T ss_pred ccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHH
Confidence 3557889999999999999999999999999999999999999999999998887763 3357788999
Q ss_pred HHhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 77 VLLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 77 ~l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
+++|++.|...+ ...++++|++|+|+|+++.+..+.+..+|.++++.++..+.
T Consensus 128 ~l~G~~~g~~~~---------------------------~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~ 180 (479)
T PRK10077 128 IIGGIGVGLASM---------------------------LSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIA 180 (479)
T ss_pred HHHhhhHhHHhh---------------------------HHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999 99999999999999999999999999999999988876554
Q ss_pred cc-----cCCcchHHHH---------------------Hh-----H--H----------------------HH-------
Q 017823 157 KI-----KVGWGWRISL---------------------KY-----R--L----------------------QF------- 174 (365)
Q Consensus 157 ~~-----~~~~gwr~~f---------------------~~-----~--~----------------------~~------- 174 (365)
.. .+.+|||+.| +. + + ..
T Consensus 181 ~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (479)
T PRK10077 181 RSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKT 260 (479)
T ss_pred ccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhh
Confidence 21 1346899888 10 0 0 00
Q ss_pred ------------HHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHH
Q 017823 175 ------------VMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLF 242 (365)
Q Consensus 175 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l 242 (365)
........+.+..+.+...+|.|.+.++.|.+..... ......++..+++.+++++++||+|||+.+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~-~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~ 339 (479)
T PRK10077 261 GGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIAL-LQTIIVGVINLTFTVLAIMTVDKFGRKPLQ 339 (479)
T ss_pred hhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHH-HHHHHHHHHHHHHHHHHHHHHHHhcChHHH
Confidence 0001111222233444556677888888898887776 777788889999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH--
Q 017823 243 LVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA-- 320 (365)
Q Consensus 243 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~-- 320 (365)
..+..++.++.+.+..... .+.........++++..++...+.|..+.+.+|.+|++.|+++.|+.+..
T Consensus 340 i~~~~~~~v~~~~l~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ 410 (479)
T PRK10077 340 IIGALGMAIGMFSLGTAFY---------TQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQW 410 (479)
T ss_pred HHhHHHHHHHHHHHHHHHh---------cCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHH
Confidence 9999888888777765421 01112233344555556666666777788889999999999999987665
Q ss_pred -------------H-------------HHHH-------HHHHHHhhcccCCCCChHHHHHHHccCCcc
Q 017823 321 -------------G-------------VFFF-------LTTFMHFFLPETKNVPIELMDKCWREHWFW 355 (365)
Q Consensus 321 -------------~-------------~f~~-------~~~~~~~~~~et~~~~~~~~~~~~~~~~~~ 355 (365)
. .|.+ ..++.+++.||||+++.+|.++.+++..++
T Consensus 411 ~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 478 (479)
T PRK10077 411 IANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEEMEALWEPETKK 478 (479)
T ss_pred HHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHhhcccC
Confidence 0 1111 223344567999999999888887665543
No 4
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.96 E-value=1.4e-27 Score=240.21 Aligned_cols=260 Identities=14% Similarity=0.232 Sum_probs=186.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHH--------HHHHHHHhhcchhhhhhhhhhh
Q 017823 22 TSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYM--------LIFGRVLLGVGIGFANQVSVWL 93 (365)
Q Consensus 22 ~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~--------~~~~r~l~G~~~g~~~~~~~~~ 93 (365)
.++.++++.+++++.|+++||+|||+++..+.++++++++++++++|++. ++++|+++|++.|...+
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~----- 137 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYT----- 137 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHH-----
Confidence 47888999999999999999999999999999999999999999999864 89999999999999999
Q ss_pred hhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccc-----cCCcchHHHH
Q 017823 94 FYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKI-----KVGWGWRISL 168 (365)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~-----~~~~gwr~~f 168 (365)
....++.|++|+|+||+..++.+.+..+|..+++.+...+... ..++|||+.|
T Consensus 138 ----------------------~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f 195 (490)
T PRK10642 138 ----------------------GASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPF 195 (490)
T ss_pred ----------------------HHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHH
Confidence 8999999999999999999999988888888888766544321 1247999998
Q ss_pred ---------------------Hh-----H------------------------HHHHHHHHHHHHHhcccccchhhcHHH
Q 017823 169 ---------------------KY-----R------------------------LQFVMAILIPFFQHVTRINVISFYAPV 198 (365)
Q Consensus 169 ---------------------~~-----~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (365)
++ + ++.........+.....++....|.|.
T Consensus 196 ~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 275 (490)
T PRK10642 196 FIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPS 275 (490)
T ss_pred HHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 000111111111122344556678888
Q ss_pred HHH-HcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHH
Q 017823 199 LFR-TIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYL 277 (365)
Q Consensus 199 ~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (365)
+++ ..|++..+.. .......++..++.++.++++||+|||+.+..+.+...+..+...... .......
T Consensus 276 ~l~~~~g~s~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 344 (490)
T PRK10642 276 YLSHNLHYSEDHGV-LIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILI----------NSNVIGL 344 (490)
T ss_pred HHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH----------hCCCHHH
Confidence 884 5688887776 677777888899999999999999999988877654443333222111 0011222
Q ss_pred HHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 278 ILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
..+...+.+++.+...+.. ..+.+|.+|++.|+++.|+.+..
T Consensus 345 ~~~~~~~~g~~~~~~~g~~-~~~~~~~~p~~~Rg~~~g~~~~~ 386 (490)
T PRK10642 345 IFAGLLMLAVILNCFTGVM-ASTLPAMFPTHIRYSALAAAFNI 386 (490)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHCCCccchHHHHHHHHH
Confidence 2333333333333333433 34457999999999988875554
No 5
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.96 E-value=3.6e-27 Score=238.01 Aligned_cols=273 Identities=21% Similarity=0.240 Sum_probs=200.3
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhh------HHHHHHHHHHhhcchh
Q 017823 11 SKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFN------IYMLIFGRVLLGVGIG 84 (365)
Q Consensus 11 ~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~------~~~~~~~r~l~G~~~g 84 (365)
.+.++.+.+++.+...++..+++++.|+++||+|||+.+..+.++..++.++++++++ ++.++++|++.|++.|
T Consensus 51 ~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g 130 (502)
T TIGR00887 51 GPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIG 130 (502)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHh
Confidence 3456778899999999999999999999999999999999999999999999888865 7899999999999999
Q ss_pred hhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccc------
Q 017823 85 FANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKI------ 158 (365)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~------ 158 (365)
...+ ..+.+++|++|+++|+++.++.+....+|.++++.++..+...
T Consensus 131 ~~~~---------------------------~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~ 183 (502)
T TIGR00887 131 GDYP---------------------------LSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLE 183 (502)
T ss_pred hhhH---------------------------HHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999 9999999999999999999999999999999999887654320
Q ss_pred --------------cCCcchHHHH----------------------------Hh-H------------------------
Q 017823 159 --------------KVGWGWRISL----------------------------KY-R------------------------ 171 (365)
Q Consensus 159 --------------~~~~gwr~~f----------------------------~~-~------------------------ 171 (365)
..+++||+.+ +. +
T Consensus 184 ~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 263 (502)
T TIGR00887 184 AAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKA 263 (502)
T ss_pred cccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccch
Confidence 1135799998 00 0
Q ss_pred --------------------HHH---HHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhh-----------HHHHHH
Q 017823 172 --------------------LQF---VMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSL-----------LMSAIV 217 (365)
Q Consensus 172 --------------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-----------~~~~~~ 217 (365)
++. .+......+.....++....|.|.++++.|++..... .....+
T Consensus 264 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 343 (502)
T TIGR00887 264 STAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLII 343 (502)
T ss_pred hccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHH
Confidence 000 0001111111122334455678888888888754321 012334
Q ss_pred HHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhcccccccc
Q 017823 218 TGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLR 297 (365)
Q Consensus 218 ~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (365)
..++.+++.++.++++||+|||+.+..+..++.++...+...... .+ .. ......++....+..++.++.
T Consensus 344 ~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~-------~~-~~--~~~~~~~~~~~~~~~~~~~~~ 413 (502)
T TIGR00887 344 ALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNH-------LS-TH--GFLAIYVLAQFFANFGPNATT 413 (502)
T ss_pred HHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHh-------cc-hh--HHHHHHHHHHHHHhcCCCchh
Confidence 455677788999999999999999988887777776666543200 00 11 111222222333455667777
Q ss_pred ccccccCCChhhhhHHHHHHHHH
Q 017823 298 WLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 298 ~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+.+++|.+|++.|+++.|+.+.+
T Consensus 414 ~~~~~E~~p~~~R~~~~g~~~~~ 436 (502)
T TIGR00887 414 FIVPGEVFPTRYRSTAHGISAAS 436 (502)
T ss_pred hhhhhccCchhHHHHHHHHHHHH
Confidence 88889999999999999998877
No 6
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.95 E-value=7e-26 Score=223.89 Aligned_cols=276 Identities=35% Similarity=0.641 Sum_probs=215.3
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHhhcchhhhh
Q 017823 11 SKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA---FNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 11 ~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a---~~~~~~~~~r~l~G~~~g~~~ 87 (365)
-+.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++..++.+++.++ .+++.++++|++.|++.+...
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 145 (481)
T TIGR00879 66 DSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIAS 145 (481)
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHH
Confidence 34668999999999999999999999999999999999999999999999998665 345689999999999999999
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHh---hhhccccCCcch
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLN---YGTQKIKVGWGW 164 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~---~~~~~~~~~~gw 164 (365)
+ ....++.|++|+++|+++.++.+.+..+|..+++.++ .... +..+|
T Consensus 146 ~---------------------------~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~---~~~~w 195 (481)
T TIGR00879 146 A---------------------------LVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLN---NTLGW 195 (481)
T ss_pred h---------------------------HHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCC---CCccH
Confidence 9 8889999999999999999999999999999999998 4433 34579
Q ss_pred HHHH--------------------Hh------------------------------------------------------
Q 017823 165 RISL--------------------KY------------------------------------------------------ 170 (365)
Q Consensus 165 r~~f--------------------~~------------------------------------------------------ 170 (365)
|+.| +.
T Consensus 196 ~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (481)
T TIGR00879 196 RIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLF 275 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHH
Confidence 9777 00
Q ss_pred ------HHHHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHH
Q 017823 171 ------RLQFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLV 244 (365)
Q Consensus 171 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~ 244 (365)
+++.........+..........++.|.+.++.|++..+.. ....+..+..+++.++.++++||+|||+.+..
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 354 (481)
T TIGR00879 276 SSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAF-LVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLI 354 (481)
T ss_pred hcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHH-HHHHHHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 01222233333344344556677788999999999987777 88888899999999999999999999999998
Q ss_pred hHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 245 GGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 245 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+.++..++.+.+......... +.+....+..+....++..+++.++.+....+..|.+|++.|+++.++.+..
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 427 (481)
T TIGR00879 355 GAAGMAICLFVLGILGASFVT---GSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAA 427 (481)
T ss_pred HHHHHHHHHHHHHHHhhcccC---CcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHH
Confidence 888777777766643211100 0000113333444445555666667777778889999999999999998777
No 7
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.95 E-value=3.9e-26 Score=226.15 Aligned_cols=265 Identities=18% Similarity=0.211 Sum_probs=185.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHH--------HHHHHHHHhhcchhhhhhh
Q 017823 18 LTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIY--------MLIFGRVLLGVGIGFANQV 89 (365)
Q Consensus 18 ~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~--------~~~~~r~l~G~~~g~~~~~ 89 (365)
.+.+.+..+++..++++++|+++||+|||+++..+..+++++++++++++++. .++++|+++|++.|...+
T Consensus 65 ~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~- 143 (432)
T PRK10406 65 TAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYG- 143 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHh-
Confidence 33444556667779999999999999999999999999999999999988764 689999999999999999
Q ss_pred hhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcccc-----CCcch
Q 017823 90 SVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIK-----VGWGW 164 (365)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~-----~~~gw 164 (365)
...+++.|++|+|+|++..+..+.+...|.++++.+...+.... +.+||
T Consensus 144 --------------------------~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gW 197 (432)
T PRK10406 144 --------------------------TSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGW 197 (432)
T ss_pred --------------------------hHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccch
Confidence 89999999999999999999999888888888887765544221 24789
Q ss_pred HHHH---------------------Hh----------------HHHHHHHHHHHHHHhcccccchhhcHHHHHH-HcCCC
Q 017823 165 RISL---------------------KY----------------RLQFVMAILIPFFQHVTRINVISFYAPVLFR-TIKLS 206 (365)
Q Consensus 165 r~~f---------------------~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~ 206 (365)
|..| +. .++.+.......+......+....|.|.+++ +.|++
T Consensus 198 r~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s 277 (432)
T PRK10406 198 RIPFALGAVLAVVALWLRRQLDETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMH 277 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCchHHHhhhcccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9998 00 0011111111122212234556678888874 57888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHH
Q 017823 207 ESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYK 286 (365)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (365)
.++.. ....+..+...++..+.|+++||++||+.+....++..+....+..... . . ...........+..
T Consensus 278 ~~~~~-~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~-------~-~-~~~~~~~~~~~~~~ 347 (432)
T PRK10406 278 ANVAS-GIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQ-------N-V-SSPYAAFGLVMCAL 347 (432)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH-------c-C-CcHHHHHHHHHHHH
Confidence 87777 6677777788888999999999999999877665544333322221110 0 0 11122121122111
Q ss_pred HhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 287 AGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 287 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
...+. ..+..+.+.+|.+|++.|+++.|+.+..
T Consensus 348 ~~~~~-~~~~~~~~~~e~fp~~~r~t~~g~~~~~ 380 (432)
T PRK10406 348 LIVSF-YTSISGILKAEMFPAQVRALGVGLSYAV 380 (432)
T ss_pred HHHHH-HHHHHHHHHHHHCCCCccchhhhHHHHH
Confidence 12111 1233456678999999999999998876
No 8
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.95 E-value=8.8e-26 Score=220.99 Aligned_cols=267 Identities=12% Similarity=0.036 Sum_probs=203.3
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.+++++|.++.+++.+.+.+++.+++++.|++.||+|||+++..+..+++++.+++++++|++.++++|+++|++.+...
T Consensus 36 ~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~ 115 (393)
T PRK09705 36 RQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQ 115 (393)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHh
Confidence 45667779999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+ ....++.|++| ++|+++++.+..+...|..+++.++..+.+.. .+||..
T Consensus 116 ~---------------------------~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~--~~w~~~ 165 (393)
T PRK09705 116 A---------------------------VMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHS--ETWYQT 165 (393)
T ss_pred h---------------------------hhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCHHHH
Confidence 8 77888889886 88999999999999999999999888776332 368876
Q ss_pred H----------------------------------HhHHHHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHH
Q 017823 168 L----------------------------------KYRLQFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLM 213 (365)
Q Consensus 168 f----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 213 (365)
+ ..+++..+......+.....+.....|.|.++++.|.+..+.+ .
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag-~ 244 (393)
T PRK09705 166 LAWWALPAVVALFAWWWQSAREVASSHKTTTTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSG-S 244 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccCCCcCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhh-H
Confidence 5 0011222222222322233555667788888888899999888 8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhcccc
Q 017823 214 SAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSW 293 (365)
Q Consensus 214 ~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (365)
...+..++.++++++.+++.||++||+....+..+..++...+.... .... ... ..+.+.+.+...
T Consensus 245 ~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~-----------~~~~-~~~--~~l~g~g~g~~~ 310 (393)
T PRK09705 245 LLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLP-----------LQLP-VLW--AMVCGLGLGGAF 310 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHcc-----------chHH-HHH--HHHHHHhccchH
Confidence 88999999999999999999999999988887766666655443321 1111 111 222334433332
Q ss_pred ccccccccccCC-ChhhhhHHHHHHHHH
Q 017823 294 GPLRWLVPSENF-PLEIISAGQIITVAA 320 (365)
Q Consensus 294 ~~~~~~~~~e~~-p~~~r~~~~~~~~~~ 320 (365)
. .......+.. |++.|++..|+.+..
T Consensus 311 ~-~~~~~~~~~~~~~~~~g~~~g~~~~~ 337 (393)
T PRK09705 311 P-LCLLLALDHSVQPAIAGKLVAFMQGI 337 (393)
T ss_pred H-HHHHHHHhhcCCHHHHHHHHHHHHHH
Confidence 3 2333334555 567899988887776
No 9
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.95 E-value=3.6e-31 Score=262.78 Aligned_cols=301 Identities=35% Similarity=0.660 Sum_probs=243.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHhhcchhhhhhhh
Q 017823 14 DSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAF---NIYMLIFGRVLLGVGIGFANQVS 90 (365)
Q Consensus 14 ~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~---~~~~~~~~r~l~G~~~g~~~~~~ 90 (365)
+..+.++..++.++|..+|+++.|+++||+|||+.+..+.++..+++++.++++ |++.+.++|++.|++.|...+
T Consensus 44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~-- 121 (451)
T PF00083_consen 44 SSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYV-- 121 (451)
T ss_pred hHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence 346789999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred hhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH--
Q 017823 91 VWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL-- 168 (365)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f-- 168 (365)
..+.++.|..|+|+|++.....+.+..+|.+++..++....+..++++||..+
T Consensus 122 -------------------------~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~ 176 (451)
T PF00083_consen 122 -------------------------VSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIF 176 (451)
T ss_pred -------------------------ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999998887775444446799887
Q ss_pred ------------------------------------------------------------------------HhHHHHHH
Q 017823 169 ------------------------------------------------------------------------KYRLQFVM 176 (365)
Q Consensus 169 ------------------------------------------------------------------------~~~~~~~~ 176 (365)
+++++...
T Consensus 177 ~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 256 (451)
T PF00083_consen 177 GAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLI 256 (451)
T ss_pred cccccccccccccccccccceecccccccccccccccccccccccccccccccccccccccceeeeeccccccccccccc
Confidence 01235566
Q ss_pred HHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHH
Q 017823 177 AILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMI 256 (365)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~ 256 (365)
.+.+..++.+++.+...+|.|.++++.+.+.+ . .......+...++.+++.++.||+|||+.++.+...+.++.+.+
T Consensus 257 ~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~ 333 (451)
T PF00083_consen 257 ALLLQFFQQFSGINFIFYYSPSIFENAGISNS--F-LATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLIL 333 (451)
T ss_pred cccccccccccccccccccccccccccccccc--c-cccccccccccccccccccccccccccccccccccccccccccc
Confidence 66666667677777888889999888888777 2 34566677888888999999999999999999988888887777
Q ss_pred HHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH----------------
Q 017823 257 GSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA---------------- 320 (365)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~---------------- 320 (365)
+..... .. +.+.......++...++...++.+++++.+.+.+|.+|++.|+++.++....
T Consensus 334 ~~~~~~--~~--~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~ 409 (451)
T PF00083_consen 334 GIIFFL--GV--SSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLF 409 (451)
T ss_pred cccccc--cc--ccccccccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 511000 00 0001123344455555666777788999999999999999999999999987
Q ss_pred -------------HHHHHHHHHHHhhcccCCCCChHHHHHH
Q 017823 321 -------------GVFFFLTTFMHFFLPETKNVPIELMDKC 348 (365)
Q Consensus 321 -------------~~f~~~~~~~~~~~~et~~~~~~~~~~~ 348 (365)
++..+..++.++++||||+++++|+++.
T Consensus 410 ~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 410 NNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred ccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhh
Confidence 1122245566788999999999999875
No 10
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.94 E-value=1.1e-25 Score=234.34 Aligned_cols=121 Identities=17% Similarity=0.171 Sum_probs=113.5
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
++++++..+.+++.++++++.+++++++|+++||+|||++++++.++.+++.++++++++++.++++|++.|++.|...+
T Consensus 195 ~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p 274 (742)
T TIGR01299 195 KDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIP 274 (742)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 45677799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
....++.|++|+++|++..++.+.+..+|.++++.++..+.
T Consensus 275 ---------------------------~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il 315 (742)
T TIGR01299 275 ---------------------------IVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAII 315 (742)
T ss_pred ---------------------------HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999998776554
No 11
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.94 E-value=2.4e-25 Score=219.34 Aligned_cols=268 Identities=17% Similarity=0.187 Sum_probs=202.8
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
+++|.|+.+.+++.+++.++..+++++.|+++||+|||+++..+..+.+++.++.+++++++.++++|++.|++.+...+
T Consensus 46 ~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~ 125 (426)
T PRK12307 46 ADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYA 125 (426)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHH
Confidence 45666799999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
....++.|++|+|+|++++++.+.+..+|.++++.+...+. +..+||+.+
T Consensus 126 ---------------------------~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~---~~~~w~~~f 175 (426)
T PRK12307 126 ---------------------------CASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFA---EAYGWRAAF 175 (426)
T ss_pred ---------------------------HHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHc---ccCCHHHHH
Confidence 88888999999999999999999999999999998877766 345798887
Q ss_pred --------------------Hh---H--------------------------HHHH--HHHHHHHHHhcccccchhhcHH
Q 017823 169 --------------------KY---R--------------------------LQFV--MAILIPFFQHVTRINVISFYAP 197 (365)
Q Consensus 169 --------------------~~---~--------------------------~~~~--~~~~~~~~~~~~~~~~~~~~~~ 197 (365)
+. + +... .......+...........+.|
T Consensus 176 ~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (426)
T PRK12307 176 FVGLLPVLLVIYIRARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLP 255 (426)
T ss_pred HHHHHHHHHHHHHHHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 0000 1111111111222233456788
Q ss_pred HHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHH
Q 017823 198 VLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYL 277 (365)
Q Consensus 198 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (365)
.++++.|.+++... .......++.++++++.+++.||++||+.+..+.++..+..+.+.... .....
T Consensus 256 ~~~~~~g~~~~~~~-~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~- 322 (426)
T PRK12307 256 TYLAGEGFDTGVVS-NLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIP-----------QDNYL- 322 (426)
T ss_pred HHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-----------cccHH-
Confidence 88888899888887 777888899999999999999999999988887766655544433321 01111
Q ss_pred HHHHHHHHHHhh-ccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 278 ILVLICVYKAGF-AFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 278 ~~~~~~~~~~~~-~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
....++++..+ ..+..+....+..|.+|++.|+++.|+.+..
T Consensus 323 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 365 (426)
T PRK12307 323 -LLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNL 365 (426)
T ss_pred -HHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHH
Confidence 11122222221 2233334445668999999999999988776
No 12
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=2.6e-25 Score=213.50 Aligned_cols=267 Identities=18% Similarity=0.187 Sum_probs=211.2
Q ss_pred cCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhh
Q 017823 7 ISNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFA 86 (365)
Q Consensus 7 ~~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~ 86 (365)
+.+|+++|..+.|+..|.|.++.++++|+...+.||+.||+.++..+.++.++++++++++||+.++++|++.|+..|..
T Consensus 39 iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f 118 (394)
T COG2814 39 IAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVF 118 (394)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 34566677999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHH
Q 017823 87 NQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRI 166 (365)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~ 166 (365)
++ ....+..|..||++|+++.++...+..++.++|.+++.++. +.+|||.
T Consensus 119 ~~---------------------------i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig---~~~GWR~ 168 (394)
T COG2814 119 WS---------------------------IAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLG---QLFGWRA 168 (394)
T ss_pred HH---------------------------HHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHH---HHhhHHH
Confidence 99 88999999999999999999999999999999999999998 5578999
Q ss_pred HH------------------------------------Hh-HHHHHHHHHHHHHHhcccccchhhcH-HHHHHHcCCCcc
Q 017823 167 SL------------------------------------KY-RLQFVMAILIPFFQHVTRINVISFYA-PVLFRTIKLSES 208 (365)
Q Consensus 167 ~f------------------------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~ 208 (365)
.| .. +++.........+. +.+.+....|. |.+.+..|++++
T Consensus 169 ~F~~ia~l~ll~~~~~~~~lP~~~~~~~~~~~~~~~~~~l~~p~v~~~l~~t~l~-~~g~F~~ftYi~P~L~~v~g~s~~ 247 (394)
T COG2814 169 TFLAIAVLALLALLLLWKLLPPSEISGSLPGPLRTLLRLLRRPGVLLGLLATFLF-MTGHFALYTYIRPFLESVAGFSVS 247 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccCCCCCCcchhHHHHHhcCchHHHHHHHHHHH-HcchhhhHHhHHHHHHHccCCCHh
Confidence 99 11 22333334443443 45555555554 555567899999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHh
Q 017823 209 TSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAG 288 (365)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (365)
... +....++++.++|+.++|++.|| +.|+.+.....++.+..+.+.+.. ++.+...+...++++.
T Consensus 248 ~vs-~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~------------~~~~~~~~~~~~wg~a 313 (394)
T COG2814 248 AVS-LVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTG------------ASPALALALLFLWGFA 313 (394)
T ss_pred HHH-HHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhc------------chHHHHHHHHHHHHHH
Confidence 999 99999999999999999999999 888888888788887777776652 2334444444444443
Q ss_pred hccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 289 FAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 289 ~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
........ ....++.. ++.+..+.++..+.
T Consensus 314 ~~~~~~~~-~~~~a~~~-p~~~~~a~sl~~aa 343 (394)
T COG2814 314 FSPALQGL-QTRLARLA-PDAADLAGSLNVAA 343 (394)
T ss_pred hhhhhhHH-HHHhcccC-CCchHHHHHHHHHH
Confidence 32222222 12223422 45677777777766
No 13
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.94 E-value=4.8e-25 Score=215.79 Aligned_cols=267 Identities=19% Similarity=0.162 Sum_probs=208.3
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
++++.|+++.+++.+.+.++..+++++.|+++||+|||+++..+.++..++.++.++++|++.+++.|++.|++.+...+
T Consensus 43 ~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 122 (406)
T PRK11551 43 QEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALP 122 (406)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHH
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
....++.|++|+++|++++++.+.+..+|..+++.++..+. +..+||..+
T Consensus 123 ---------------------------~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~ 172 (406)
T PRK11551 123 ---------------------------NLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAA---GDAAWRHIF 172 (406)
T ss_pred ---------------------------HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---cccCHHHHH
Confidence 88889999999999999999999999999999999987766 345688877
Q ss_pred ----------------------H---------hHH------------HHHHHHHHHHHHhcccccchhhcHHHHHHHcCC
Q 017823 169 ----------------------K---------YRL------------QFVMAILIPFFQHVTRINVISFYAPVLFRTIKL 205 (365)
Q Consensus 169 ----------------------~---------~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 205 (365)
+ .++ +.........+...........|.|.++++.|+
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~ 252 (406)
T PRK11551 173 YVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAPVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQGL 252 (406)
T ss_pred HHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 0 000 001111222222233344556678899988999
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHH
Q 017823 206 SESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVY 285 (365)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (365)
++.+.+ .......++.++++++.+++.||+|||+.+..+.+...++.+.+... +..+...+...+.
T Consensus 253 s~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~ 318 (406)
T PRK11551 253 SRSQAG-LVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAA-------------PSFAGMLLAGFAA 318 (406)
T ss_pred Chhhhh-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhc-------------CcHHHHHHHHHHH
Confidence 998888 88888899999999999999999999998887666655555444332 1122223333333
Q ss_pred HHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 286 KAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 286 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+++.. +..+....+.+|.+|++.|+++.|+.+..
T Consensus 319 g~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 352 (406)
T PRK11551 319 GLFVV-GGQSVLYALAPLFYPTQVRGTGVGAAVAV 352 (406)
T ss_pred HHHHH-hHHHHHHHHHHHHcchhhhhhhhhHHHHh
Confidence 33332 23344456778999999999999998887
No 14
>TIGR00898 2A0119 cation transport protein.
Probab=99.94 E-value=3.9e-25 Score=222.78 Aligned_cols=288 Identities=18% Similarity=0.259 Sum_probs=206.6
Q ss_pred CccccCC---chHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchh
Q 017823 8 SNYSKFD---SQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIG 84 (365)
Q Consensus 8 ~~~~~~~---~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g 84 (365)
.++++++ +.+.++..+++.++..+++++.|+++||+|||+++..+.++..++.++.++++|++.+++.|++.|++.+
T Consensus 116 ~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~ 195 (505)
T TIGR00898 116 VTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIG 195 (505)
T ss_pred EEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhcc
Confidence 4567777 8899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcch
Q 017823 85 FANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGW 164 (365)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gw 164 (365)
...+ ....++.|++|+++|+++.++.+.+..+|.++++.++..+. + |
T Consensus 196 ~~~~---------------------------~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~---~---w 242 (505)
T TIGR00898 196 GIWV---------------------------QAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP---D---W 242 (505)
T ss_pred chHH---------------------------HHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh---H---H
Confidence 9999 88999999999999999999999999999999999887664 2 7
Q ss_pred HHHH---------------------Hh-----------------------------------H----------------H
Q 017823 165 RISL---------------------KY-----------------------------------R----------------L 172 (365)
Q Consensus 165 r~~f---------------------~~-----------------------------------~----------------~ 172 (365)
|+.+ ++ + +
T Consensus 243 r~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 322 (505)
T TIGR00898 243 RWLQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRT 322 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCC
Confidence 7776 00 0 0
Q ss_pred HHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHH
Q 017823 173 QFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVS 252 (365)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~ 252 (365)
+.+....+.............+..+.+....+.+ .. ......++..+++.++.+++.||+|||+.+..+.++.+++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~ 398 (505)
T TIGR00898 323 PNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGN---IY-LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVA 398 (505)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccccccCCC---hH-HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 0000000000000000011111112222333333 22 4456677888999999999999999999999988888877
Q ss_pred HHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH------------
Q 017823 253 RVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA------------ 320 (365)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~------------ 320 (365)
.+.+.... ....+......++..++....+ +..+.+.+|.+|++.|+++.|+.+..
T Consensus 399 ~l~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~ 466 (505)
T TIGR00898 399 LLLLLFVP-----------VDLYFLRTALAVLGKFGITSAF-QMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLV 466 (505)
T ss_pred HHHHHHcC-----------CCchHHHHHHHHHHHHHHHHHH-HHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHH
Confidence 77665541 1112233333333334333333 34467779999999999999998887
Q ss_pred --------------HHHHHHHHHHHhhcccCCCCChHH
Q 017823 321 --------------GVFFFLTTFMHFFLPETKNVPIEL 344 (365)
Q Consensus 321 --------------~~f~~~~~~~~~~~~et~~~~~~~ 344 (365)
+...+.+.+..+++|||++++++|
T Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~~ 504 (505)
T TIGR00898 467 YLGEKWLFLPLVLFGGLALLAGILTLFLPETKGVPLPE 504 (505)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHcCcCCCCCCCCC
Confidence 111113444566789999887653
No 15
>PRK03545 putative arabinose transporter; Provisional
Probab=99.94 E-value=1.2e-24 Score=212.27 Aligned_cols=266 Identities=15% Similarity=0.141 Sum_probs=196.4
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.+++|.|+++.+++.+.+.+++.+++++.|++.||+|||+++..+..+..++++.+++++|++.++++|+++|++.+...
T Consensus 36 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 115 (390)
T PRK03545 36 AQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFW 115 (390)
T ss_pred HhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 35677779999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+ ....++.|+.|+++|++++++.+.+.++|..++++++..+. +..|||+.
T Consensus 116 ~---------------------------~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~---~~~gw~~~ 165 (390)
T PRK03545 116 S---------------------------ITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIG---QYLGWRTT 165 (390)
T ss_pred H---------------------------HHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHH---HHhcHHHH
Confidence 8 78888999999999999999999999999999999998876 44579988
Q ss_pred H------------------H----------------hHHH-HHHHHHHHHHHhcccccchhhcHHHHH-HHcCCCcchhh
Q 017823 168 L------------------K----------------YRLQ-FVMAILIPFFQHVTRINVISFYAPVLF-RTIKLSESTSL 211 (365)
Q Consensus 168 f------------------~----------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~ 211 (365)
| + .+++ ........+.. .........+.|.++ +..|.++++.+
T Consensus 166 f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~g~s~~~~~ 244 (390)
T PRK03545 166 FLAIGGGALITLLLLIKLLPLLPSEHSGSLKSLPLLFRRPALVSLYLLTVVV-VTAHFTAYSYIEPFVQQVAGLSENFAT 244 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCcchHHHHHHHHhCcHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCccHHH
Confidence 7 0 0111 11222222222 112222334555555 44688988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhcc
Q 017823 212 LMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAF 291 (365)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (365)
.......++.++++++.+++.||++||+... +.....++...+.... ++.+...++..+++.+..
T Consensus 245 -~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~------------~~~~~~~~~~~l~g~~~~- 309 (390)
T PRK03545 245 -LLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAA------------NSEWHLSVLSIFWGIAIM- 309 (390)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHh------------chHHHHHHHHHHHHHHHh-
Confidence 7888889999999999999999999886543 3333333333322221 123333444445555442
Q ss_pred ccccccccccccCCChhhhhHHHHHHHHH
Q 017823 292 SWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 292 ~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
..++.......|..| +.|+++.|+.+..
T Consensus 310 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~~ 337 (390)
T PRK03545 310 CIGLAMQVKVLKLAP-DATDVAMALFSGI 337 (390)
T ss_pred cchHHHHHHHHHhCC-CcHHHHHHHHHHH
Confidence 223333445567766 5788888877765
No 16
>PRK09952 shikimate transporter; Provisional
Probab=99.94 E-value=1.8e-24 Score=214.82 Aligned_cols=259 Identities=16% Similarity=0.232 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHH--------HHHHHHHHhhcchhhhhhhhhhhhh
Q 017823 24 SLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIY--------MLIFGRVLLGVGIGFANQVSVWLFY 95 (365)
Q Consensus 24 ~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~--------~~~~~r~l~G~~~g~~~~~~~~~~~ 95 (365)
+.+++..+++++.|+++||+|||+++..+..+++++++++++++|++ .++++|+++|++.|...+
T Consensus 72 ~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~------- 144 (438)
T PRK09952 72 VGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWG------- 144 (438)
T ss_pred HHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHH-------
Confidence 55677889999999999999999999999999999999999999987 588999999999999999
Q ss_pred hcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcccc-----CCcchHHHH--
Q 017823 96 FSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIK-----VGWGWRISL-- 168 (365)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~-----~~~gwr~~f-- 168 (365)
....++.|+.|+|+|++..+..+.+..+|.+++..+...+.... ..+|||..|
T Consensus 145 --------------------~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~ 204 (438)
T PRK09952 145 --------------------GAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLF 204 (438)
T ss_pred --------------------HHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHH
Confidence 88899999999999999999999999999999887766554221 247899998
Q ss_pred ------------------H----h--H-----------------HHHHHHHHHHHHHhcccccchhhcHHHHH-HHcCCC
Q 017823 169 ------------------K----Y--R-----------------LQFVMAILIPFFQHVTRINVISFYAPVLF-RTIKLS 206 (365)
Q Consensus 169 ------------------~----~--~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~ 206 (365)
+ . + ++.+.......+......+....|.|.++ +..|++
T Consensus 205 ~~~~~l~~~~l~~~~~es~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s 284 (438)
T PRK09952 205 SIVLVLIALWVRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLP 284 (438)
T ss_pred HHHHHHHHHHHHHhCCCChhHHHHHhhcccccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 0 0 0 00111111111111223444556777777 457887
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHH
Q 017823 207 ESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYK 286 (365)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (365)
++... ......++...++.++.|+++||+|||+.+..+.++..++.+.+..... ..+..+..+....+.+
T Consensus 285 ~~~~~-~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~ 354 (438)
T PRK09952 285 RELFL-NIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALE---------AQSIFWIVFFSIMLAN 354 (438)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH---------cCChHHHHHHHHHHHH
Confidence 76554 4555667788889999999999999999888776655544433322210 0111222223333333
Q ss_pred HhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 287 AGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 287 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
++.+... +..+.+.+|.+|++.|+++.++.+..
T Consensus 355 ~~~~~~~-~~~~~~~~e~~p~~~r~tg~g~~~~~ 387 (438)
T PRK09952 355 IAHDMVV-CVQQPMFTEMFGASYRYSGAGVGYQV 387 (438)
T ss_pred HHHHHHH-HHHHHHHHHHCCcchhHHHHhHHHHH
Confidence 4433333 33456778999999999998887655
No 17
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.93 E-value=1.3e-24 Score=214.04 Aligned_cols=272 Identities=14% Similarity=0.128 Sum_probs=201.9
Q ss_pred cCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhh
Q 017823 7 ISNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFA 86 (365)
Q Consensus 7 ~~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~ 86 (365)
+++++++|.++.+++.+++++++.+++++.|++.||+|||+++..+.+++.++++++++++|++.+++.|++.|++.+..
T Consensus 34 l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 113 (412)
T TIGR02332 34 MGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGF 113 (412)
T ss_pred hHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhH
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccc---cCCcc
Q 017823 87 NQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKI---KVGWG 163 (365)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~---~~~~g 163 (365)
.+ ....++.|++|+++|++++++++.+..+|..++++++..+.+. .+..|
T Consensus 114 ~~---------------------------~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~g 166 (412)
T TIGR02332 114 LP---------------------------GILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKG 166 (412)
T ss_pred HH---------------------------HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccc
Confidence 88 7888899999999999999999999999999999998877532 13468
Q ss_pred hHHHH---------------------H-h--------HH----------------------------H--------HHHH
Q 017823 164 WRISL---------------------K-Y--------RL----------------------------Q--------FVMA 177 (365)
Q Consensus 164 wr~~f---------------------~-~--------~~----------------------------~--------~~~~ 177 (365)
||+.| + . ++ . ..+.
T Consensus 167 wr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (412)
T TIGR02332 167 WQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIFTPAIML 246 (412)
T ss_pred hhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhcChHHHH
Confidence 99999 1 0 00 0 0111
Q ss_pred HHHHHHHhcccccchhhcHHHHHHHc--CCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHH-HHhHHHHHHHHH
Q 017823 178 ILIPFFQHVTRINVISFYAPVLFRTI--KLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLF-LVGGIQMLVSRV 254 (365)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l-~~~~~~~~i~~~ 254 (365)
.....+...........|.|.++++. +++..+.. .......++..++.++.++++||++||+.. ........++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~-~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~- 324 (412)
T TIGR02332 247 YTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIG-LLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW- 324 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhH-HHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH-
Confidence 22222333334556678999999774 56767777 778899999999999999999999987753 33333333322
Q ss_pred HHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 255 MIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.+.... + . .............+... ..+..+....|.+|++.|+++.|+.+..
T Consensus 325 ~~~~~~----------~-~-~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~a~g~~~~~ 377 (412)
T TIGR02332 325 LLASAT----------D-H-NLIQLLGIIMASMGSFS-AMAIFWTTPDQSISLQARAIAIAVINAT 377 (412)
T ss_pred HHHHhc----------C-C-HHHHHHHHHHHHHHhhh-hhhHHHhhcccccchHHHHHHHHHHHHh
Confidence 221110 1 1 11111122222222211 1233345557889999999999999988
No 18
>PRK15075 citrate-proton symporter; Provisional
Probab=99.93 E-value=2.7e-24 Score=213.14 Aligned_cols=272 Identities=19% Similarity=0.327 Sum_probs=187.0
Q ss_pred cccCCchHHHHHH-HH-----HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHH--------HHHHH
Q 017823 10 YSKFDSQLLTTFT-SS-----LYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIY--------MLIFG 75 (365)
Q Consensus 10 ~~~~~~~~~~~~~-s~-----~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~--------~~~~~ 75 (365)
+++.++.+.+... +. .+++..+++++.|+++||+|||+.++.+..++.+++++++++++++ .++++
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~ 123 (434)
T PRK15075 44 TFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLG 123 (434)
T ss_pred HhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 3444455554332 22 2344457899999999999999999999999999999999999877 46899
Q ss_pred HHHhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhh
Q 017823 76 RVLLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGT 155 (365)
Q Consensus 76 r~l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~ 155 (365)
|+++|++.+...+ ....++.|++|+++|++.+++.+.+..+|..+++.++..+
T Consensus 124 R~l~G~~~g~~~~---------------------------~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l 176 (434)
T PRK15075 124 RLLQGFSAGVELG---------------------------GVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLL 176 (434)
T ss_pred HHHhhccccccHH---------------------------HHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988 7888999999999999999999988888888777777665
Q ss_pred ccc-----cCCcchHHHH-----------------Hh--------------------HH--HHHHHHHHHHHHhcccccc
Q 017823 156 QKI-----KVGWGWRISL-----------------KY--------------------RL--QFVMAILIPFFQHVTRINV 191 (365)
Q Consensus 156 ~~~-----~~~~gwr~~f-----------------~~--------------------~~--~~~~~~~~~~~~~~~~~~~ 191 (365)
... .+.+|||+.| +. ++ +.........+........
T Consensus 177 ~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (434)
T PRK15075 177 NQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFLARKHRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYL 256 (434)
T ss_pred HHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhhccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 321 1347899888 00 00 1111111222222334556
Q ss_pred hhhcHHHHHHH-cCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHH-HHHHHhhhcCCCCC
Q 017823 192 ISFYAPVLFRT-IKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVM-IGSIMADQIGDHGG 269 (365)
Q Consensus 192 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~-~~~~~~~~~~~~~~ 269 (365)
...|.|.++++ .|+++.+.. .......++.+++.++.|+++||+|||+.+..+.....+.... ..... +
T Consensus 257 ~~~~~p~~l~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~-----~--- 327 (434)
T PRK15075 257 ITVYTPTFGKTVLHLSAADSL-LVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLV-----A--- 327 (434)
T ss_pred HHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH-----c---
Confidence 77789998865 799988887 7778888999999999999999999999887665443322211 11110 0
Q ss_pred CchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 270 FSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.+... .......+.+.+++ ...+..+.+.+|.+|++.|+++.++.+.+
T Consensus 328 -~~~~~-~~~~~~~~~~~~~g-~~~~~~~~~~~e~~p~~~rg~~~g~~~~~ 375 (434)
T PRK15075 328 -APSFA-RMLAVELWLSFLYG-SYNGAMVVALTEVMPAEVRTAGFSLAYSL 375 (434)
T ss_pred -CCchH-HHHHHHHHHHHHHH-HHHhhHHHHHHHHCCCCccchheeHHHHH
Confidence 01111 11111222222332 22333345668999999999999886554
No 19
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.93 E-value=1.4e-24 Score=210.95 Aligned_cols=263 Identities=10% Similarity=-0.003 Sum_probs=181.5
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.+|+++|+++.|++.+.+++++.+++++.|+++||+|||+++.........+......++|++.++++|+++|++.+...
T Consensus 18 ~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~~~ 97 (368)
T TIGR00903 18 AEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPFLL 97 (368)
T ss_pred HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHHHH
Confidence 34566779999999999999999999999999999999998766555554443333333799999999999999998644
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
.....++|++|+|+|+++.++.+.+..+|.+++++++..+. +.+|||..
T Consensus 98 ----------------------------~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~---~~~gWr~~ 146 (368)
T TIGR00903 98 ----------------------------NAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIY---TAGGLQLL 146 (368)
T ss_pred ----------------------------HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HccchHHH
Confidence 34445689999999999999999999999999999999887 45689998
Q ss_pred H------------------H----h------------------HHHHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCc
Q 017823 168 L------------------K----Y------------------RLQFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSE 207 (365)
Q Consensus 168 f------------------~----~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 207 (365)
| + . +++..+......+......+....|.|.++++.|++.
T Consensus 147 f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~ 226 (368)
T TIGR00903 147 IIPIAAVAAAGIILVLAALPALPFQAAEGFGFKDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLED 226 (368)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCCCcchHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCh
Confidence 8 1 0 0122333434444445566777889999998888876
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhhCcc---hHHHH-hHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHH
Q 017823 208 STSLLMSAIVTGSLGTISTSLSMILADRLGRK---VLFLV-GGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLIC 283 (365)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr---~~l~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (365)
+ .. ....+..+.+.++ .++++||..|| +.... .....++....+... ...+..+.+..
T Consensus 227 ~-~~-~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~-------------~~~~~~~~~~~ 288 (368)
T TIGR00903 227 I-AG-DAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFE-------------LNRLALFAFIG 288 (368)
T ss_pred H-HH-HHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHc-------------cccHHHHHHHH
Confidence 4 44 4455555545444 47778877654 33222 333333322222211 11122233333
Q ss_pred HHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 284 VYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+.+++.... .+..+.+++|.+|++.|+++.|+.+..
T Consensus 289 l~~~~~~~~-~~~~~~~~~~~~p~~~rgt~~G~~~~~ 324 (368)
T TIGR00903 289 IAGLLMLPA-YAIIMDWIGKFCDKELHGKAAGAIGFT 324 (368)
T ss_pred HHHHhhhhh-HHHHHHHHHHhcchhhcCcccchhhHH
Confidence 333333222 233467789999999999999999997
No 20
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.93 E-value=2e-24 Score=207.24 Aligned_cols=269 Identities=13% Similarity=0.047 Sum_probs=200.1
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.+++++|.++.+++.+++.++..+++++.|+++||+|||+++..+..+.+++.++.++++|++.++++|++.|++.+...
T Consensus 30 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 109 (377)
T TIGR00890 30 GRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAY 109 (377)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 34567779999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+ .....+.|++| |+|+++.++...+.++|..+++++...+. +..+||+.
T Consensus 110 ~---------------------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~ 158 (377)
T TIGR00890 110 G---------------------------IALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVI---NLEGVPAA 158 (377)
T ss_pred H---------------------------hHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHH---hcccHHHH
Confidence 7 66667788876 68999999999999999887666655554 33579988
Q ss_pred H----------------------H-------------------hHHHHHHHHHHHHHHhcccccchhhcHHHHHHHcCCC
Q 017823 168 L----------------------K-------------------YRLQFVMAILIPFFQHVTRINVISFYAPVLFRTIKLS 206 (365)
Q Consensus 168 f----------------------~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 206 (365)
+ + .+++..+......+...........+.+.+.++.+.+
T Consensus 159 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (377)
T TIGR00890 159 FIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLS 238 (377)
T ss_pred HHHHHHHHHHHHHHHHHheecCchhccccCcccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 7 0 0011111222222222222223334455566778888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHH
Q 017823 207 ESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYK 286 (365)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (365)
+++.. .......+..++++++.+++.||++||+.+..+.....++.+.+.... ............+.+
T Consensus 239 ~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~g 306 (377)
T TIGR00890 239 DGFLV-LAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIP-----------MLNDVLFLATVALVF 306 (377)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcc-----------cchhHHHHHHHHHHH
Confidence 87777 788889999999999999999999999998888877777766654431 111222222333334
Q ss_pred HhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 287 AGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 287 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.+.+.... ....+.+|.+|+++|+++.|+.+..
T Consensus 307 ~~~g~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~ 339 (377)
T TIGR00890 307 FTWGGTIS-LFPSLVSDIFGPANSAANYGFLYTA 339 (377)
T ss_pred HHhccchh-ccHHHHHHHhhhhhhhhHhHHHHHH
Confidence 44433333 3344568999999999999998877
No 21
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.93 E-value=6e-24 Score=207.71 Aligned_cols=266 Identities=15% Similarity=0.108 Sum_probs=195.4
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh--------hhHHHHHHHHHHh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA--------FNIYMLIFGRVLL 79 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a--------~~~~~~~~~r~l~ 79 (365)
.+++|.|+.+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++.+...++ .+++.+++.|+++
T Consensus 43 ~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 122 (399)
T PRK05122 43 HDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLL 122 (399)
T ss_pred HHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHH
Confidence 35667779999999999999999999999999999999999999999888877665543 2577899999999
Q ss_pred hcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcccc
Q 017823 80 GVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIK 159 (365)
Q Consensus 80 G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 159 (365)
|++.+...+ ....++.|+.|+|+|++++++.+.+..+|..+++.++..+.
T Consensus 123 G~~~~~~~~---------------------------~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~--- 172 (399)
T PRK05122 123 GIGESLAGT---------------------------GSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLY--- 172 (399)
T ss_pred HhhHHhhcc---------------------------hHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHH---
Confidence 999999988 77888899999999999999999999999999999988877
Q ss_pred CCcchHHHH-----------------H-----------hHH--HHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcch
Q 017823 160 VGWGWRISL-----------------K-----------YRL--QFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSEST 209 (365)
Q Consensus 160 ~~~gwr~~f-----------------~-----------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 209 (365)
+..|||..+ + .++ +.....................+.|.+.++.|.+ .
T Consensus 173 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 250 (399)
T PRK05122 173 HWGGLAGLGLLIMLLALLGLLLARPRPAVPPVKGERLPFRRVLGRVWPYGMGLALASIGFGTIATFITLYYAARGWD--G 250 (399)
T ss_pred HcccHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc--c
Confidence 345798877 0 000 0011111111111122334445677777666663 3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhh
Q 017823 210 SLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGF 289 (365)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (365)
.. .......++.+++.++.+++.||++||+.+..+.....++...+... ++.+...+...+.+++.
T Consensus 251 ~~-~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~G~~~ 316 (399)
T PRK05122 251 AA-LALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLA-------------PSPWMALIGAALTGFGF 316 (399)
T ss_pred ch-HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh-------------ccHHHHHHHHHHHHHhH
Confidence 34 45567788889999999999999999998888877777666555443 12233344445555555
Q ss_pred ccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 290 AFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 290 ~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+..+... .....|..|++.|+++.++.+..
T Consensus 317 ~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~ 346 (399)
T PRK05122 317 SLVFPAL-GVEAVKRVPPQNRGAALGAYSVF 346 (399)
T ss_pred HHHHHHH-HHHHHHhCCHHHHHHHHHHHHHH
Confidence 4433332 33446889999999999987776
No 22
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.92 E-value=9.5e-24 Score=205.17 Aligned_cols=270 Identities=17% Similarity=0.164 Sum_probs=202.0
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.+++|.|+.+.+++.+++.++..+++++.|.++||+|||+++..+..+.+++.++.+++++++.+++.|++.|++.+...
T Consensus 39 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~ 118 (405)
T TIGR00891 39 AGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEY 118 (405)
T ss_pred HHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhh
Confidence 35667779999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+ ....++.|+.|+++|++++++.+.+..+|..+++.++..+.+..+ .+||+.
T Consensus 119 ~---------------------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~-~~w~~~ 170 (405)
T TIGR00891 119 G---------------------------SSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWG-DGWRAL 170 (405)
T ss_pred H---------------------------HHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ccHHHH
Confidence 9 888899999999999999999999999999999999887764322 359988
Q ss_pred H--------------------Hh------HH--------------H-----------------------HHHHHHHHHHH
Q 017823 168 L--------------------KY------RL--------------Q-----------------------FVMAILIPFFQ 184 (365)
Q Consensus 168 f--------------------~~------~~--------------~-----------------------~~~~~~~~~~~ 184 (365)
+ +. .+ + .........+.
T Consensus 171 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (405)
T TIGR00891 171 FFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFA 250 (405)
T ss_pred HHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHH
Confidence 7 00 00 0 00111111111
Q ss_pred hcccccchhhcHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhh
Q 017823 185 HVTRINVISFYAPVLF-RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQ 263 (365)
Q Consensus 185 ~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~ 263 (365)
.........+.|.++ ++.|+++.+.. .......++.++++++.+++.||+|||+.+..+.....+..+.....
T Consensus 251 -~~~~~~~~~~~~~~~~~~~g~s~~~~~-~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~---- 324 (405)
T TIGR00891 251 -NLYSHPIQDLLPTYLKADLGLSPHTVA-NIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAI---- 324 (405)
T ss_pred -HHHHhhhhhhhHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHh----
Confidence 112223334566666 56799998888 78888999999999999999999999998887766543332222211
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 264 IGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
. ...+...+...+.+....... +....+.+|.+|++.|+++.|+.+..
T Consensus 325 -------~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~ 372 (405)
T TIGR00891 325 -------G-ANVAVLGLGLFFQQMLVQGIW-GILPKHLGEYFPTDQRAAGLGFTYQL 372 (405)
T ss_pred -------C-CchHHHHHHHHHHHHHHccch-hhHHHHHhhhCCcchhHHHhhHHHHH
Confidence 0 112222233233333333233 33345668999999999999998877
No 23
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.92 E-value=2.2e-23 Score=197.70 Aligned_cols=265 Identities=24% Similarity=0.310 Sum_probs=219.9
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQV 89 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~ 89 (365)
+.+.|+.+.+++.+...++..+++++.|+++||+|||+.+..+..+..++.+...++++++.++++|++.|++.+...+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~- 106 (352)
T cd06174 28 DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYP- 106 (352)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccH-
Confidence 4567799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH-
Q 017823 90 SVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL- 168 (365)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f- 168 (365)
....++.|+.|+|+|++.+++.+....+|..+++.++..+.+. .+||..+
T Consensus 107 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~ 157 (352)
T cd06174 107 --------------------------AAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES---LGWRWLFL 157 (352)
T ss_pred --------------------------hHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH---hhHHHHHH
Confidence 8999999999999999999999999999999999999988743 3588877
Q ss_pred --------------HhHHHHHHHHHHHHHHhcccccchhhcHHHHHHHc-CCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 017823 169 --------------KYRLQFVMAILIPFFQHVTRINVISFYAPVLFRTI-KLSESTSLLMSAIVTGSLGTISTSLSMILA 233 (365)
Q Consensus 169 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 233 (365)
..+++....... .+...........+.|.+.++. |.++.+.+ .......++..++.++.+++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~ 235 (352)
T cd06174 158 ILAILGLLLALLLLFLLRLLLLLALA-FFLLSFGYYGLLTYLPLYLQEVLGLSAAEAG-LLLSLFGLGGILGALLGGLLS 235 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhHHHHHHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 112333333333 3333445667777888888665 88888888 889999999999999999999
Q ss_pred hhhCcch-HHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhH
Q 017823 234 DRLGRKV-LFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISA 312 (365)
Q Consensus 234 dr~grr~-~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 312 (365)
||++||+ .+..+.....++.+..... ++.+...+...+.+.+.+.. .+....+..|..|+++|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~i~~~~~~~~-------------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~ 301 (352)
T cd06174 236 DRLGRRRLLLLIGLLLAALGLLLLALA-------------PSLALLLVALLLLGFGLGFA-FPALLTLASELAPPEARGT 301 (352)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHh-------------ccHHHHHHHHHHHHHHHhcc-chhHHHHHHhhcCHHHHHH
Confidence 9999999 8888888888887777654 11344455555556665544 4455677799999999999
Q ss_pred HHHHHHHH
Q 017823 313 GQIITVAA 320 (365)
Q Consensus 313 ~~~~~~~~ 320 (365)
..|+.+..
T Consensus 302 ~~~~~~~~ 309 (352)
T cd06174 302 ASGLFNTF 309 (352)
T ss_pred HHHHHHHH
Confidence 99998887
No 24
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.92 E-value=1e-23 Score=212.62 Aligned_cols=271 Identities=14% Similarity=-0.002 Sum_probs=206.7
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.+++|.+.++.+|+.+.+.++..++.++.|+++||+|||+.+..+..++.++++++++++|++.++++|+++|++.+...
T Consensus 33 ~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~ 112 (495)
T PRK14995 33 SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIV 112 (495)
T ss_pred HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 34566679999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccC-CCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMA-PPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRI 166 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~ 166 (365)
+ .....+.+.+ |+++|++++++......+|..+||.+++.+. ++.+||+
T Consensus 113 ~---------------------------~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~---~~~gwr~ 162 (495)
T PRK14995 113 P---------------------------ATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILL---EHFYWGS 162 (495)
T ss_pred H---------------------------HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---ccCChHH
Confidence 8 6666666665 6789999999999999999999999999998 4467999
Q ss_pred HH------------------Hh---H-------HHH--------------------------------------------
Q 017823 167 SL------------------KY---R-------LQF-------------------------------------------- 174 (365)
Q Consensus 167 ~f------------------~~---~-------~~~-------------------------------------------- 174 (365)
.| +. + ...
T Consensus 163 ~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~ 242 (495)
T PRK14995 163 VFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRT 242 (495)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 98 00 0 000
Q ss_pred ------------------HHHHHHHHHHhcccccchhhcHHHHHHH-cCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 017823 175 ------------------VMAILIPFFQHVTRINVISFYAPVLFRT-IKLSESTSLLMSAIVTGSLGTISTSLSMILADR 235 (365)
Q Consensus 175 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr 235 (365)
........+..........++.|.+++. .|+++.+++ ....+..+...++.++.|++.||
T Consensus 243 e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag-~~~~~~~~~~~~~~~~~g~l~~r 321 (495)
T PRK14995 243 QLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAG-MFMLPVMVASGFSGPIAGILVSR 321 (495)
T ss_pred HhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000011111111223344567777754 699999999 88899999999999999999999
Q ss_pred hCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHH
Q 017823 236 LGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQI 315 (365)
Q Consensus 236 ~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 315 (365)
+|+|+.+..+..+..++...+.... .....+.......+.+++.+....+. .....+..|+++++.+.+
T Consensus 322 ~g~~~~~~~g~~~~~~~~~~l~~~~----------~~~~~~~~~~~~~l~G~g~g~~~~~~-~~~~~~~~~~~~~g~~~~ 390 (495)
T PRK14995 322 LGLRLVATGGMALSALSFYGLAMTD----------FSTQQWQAWGLMALLGFSAASALLAS-TSAIMAAAPPEKAAAAGA 390 (495)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHhc----------CCCchHHHHHHHHHHHHhHHHHHHHH-HHHHHhcCCHHhcchHHH
Confidence 9999988888777766665554431 01112233444555566655544444 334468899999999999
Q ss_pred HHHHH
Q 017823 316 ITVAA 320 (365)
Q Consensus 316 ~~~~~ 320 (365)
+.+..
T Consensus 391 ~~~~~ 395 (495)
T PRK14995 391 IETMA 395 (495)
T ss_pred HHHHH
Confidence 98877
No 25
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.92 E-value=6.7e-24 Score=202.96 Aligned_cols=267 Identities=11% Similarity=0.036 Sum_probs=208.7
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh-----hHHHHHHHHHHhhcchh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAF-----NIYMLIFGRVLLGVGIG 84 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~-----~~~~~~~~r~l~G~~~g 84 (365)
+.+.|+.+.+++.+++.++..+++++.|+++||+|||+++..+..+..++.++..+++ |++.++++|++.|++.+
T Consensus 28 ~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 107 (365)
T TIGR00900 28 AGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQA 107 (365)
T ss_pred HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHH
Confidence 3566789999999999999999999999999999999999999999999888888887 99999999999999999
Q ss_pred hhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcch
Q 017823 85 FANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGW 164 (365)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gw 164 (365)
...+ ...+++.|+.|+++|++.+++.+.+..+|.++++.++..+.+ ..+|
T Consensus 108 ~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~---~~g~ 157 (365)
T TIGR00900 108 FFTP---------------------------AYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA---TLGI 157 (365)
T ss_pred HHHH---------------------------HHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH---HhhH
Confidence 9999 888999999999999999999999999999999999988873 3568
Q ss_pred HHHH-----------------------H---------------------hHHHHHHHHHHHHHHhcccccchh-hcHHHH
Q 017823 165 RISL-----------------------K---------------------YRLQFVMAILIPFFQHVTRINVIS-FYAPVL 199 (365)
Q Consensus 165 r~~f-----------------------~---------------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 199 (365)
|..+ + .+++.+.......+.......... .+.|.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (365)
T TIGR00900 158 KWAIWVDAVGFAISALLIVSVRIPELAASEIQALSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYV 237 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccCCCccccccchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 8887 0 001112222222222122222232 577888
Q ss_pred HHH-cCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHH
Q 017823 200 FRT-IKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLI 278 (365)
Q Consensus 200 ~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (365)
.++ .|.++.+.+ .......++.+++.++.+++.||.+||+.+..+.....++........ ++.+..
T Consensus 238 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 304 (365)
T TIGR00900 238 QSKYLGRGSTHYG-WVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTP------------PNFPLF 304 (365)
T ss_pred HHHHhCCchHHHH-HHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhc------------hhHHHH
Confidence 865 788888888 888888999999999999999999999988877666666655554431 113344
Q ss_pred HHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 279 LVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.+..++.+++.+.. .+....+..|..|++.|+++.|+.+..
T Consensus 305 ~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~ 345 (365)
T TIGR00900 305 LVLWFAIGVGYGPI-NVPQGTLLQRRVPAELLGRVFGAQFSL 345 (365)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 44555555555443 344456678999999999999999887
No 26
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.92 E-value=3e-23 Score=208.39 Aligned_cols=269 Identities=15% Similarity=0.190 Sum_probs=200.5
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
+++|+|+.+.+++.+.+.++..+++++.|+++||+|||+.+..+.++.+++.++.++++|++.+++.|++.|++.+...+
T Consensus 48 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~ 127 (496)
T PRK03893 48 GEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYG 127 (496)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 45677799999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
....++.|.+|+++|+++++....+..+|..+++.+...+. +.++||+.+
T Consensus 128 ---------------------------~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~---~~~~w~~~f 177 (496)
T PRK03893 128 ---------------------------SSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVV---PVWGWRALF 177 (496)
T ss_pred ---------------------------HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccCCHHHHH
Confidence 78888999999999999999999999999999999998877 446799887
Q ss_pred ---------------------HhHH---------HH----------HHHH------------------------------
Q 017823 169 ---------------------KYRL---------QF----------VMAI------------------------------ 178 (365)
Q Consensus 169 ---------------------~~~~---------~~----------~~~~------------------------------ 178 (365)
+.++ .. ....
T Consensus 178 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (496)
T PRK03893 178 FIGILPIIFALWLRKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLL 257 (496)
T ss_pred HHHHHHHHHHHHHHHhCCCchhhhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHH
Confidence 0000 00 0000
Q ss_pred -----------------------HHHHHHhcccccchhhcHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh
Q 017823 179 -----------------------LIPFFQHVTRINVISFYAPVLF-RTIKLSESTSLLMSAIVTGSLGTISTSLSMILAD 234 (365)
Q Consensus 179 -----------------------~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 234 (365)
....+..+........+.|.++ ++.|+++.+.+ .......++.++++++.++++|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g-~~~~~~~~~~~~g~~~~g~l~d 336 (496)
T PRK03893 258 CAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVA-NVLFFSGFGAAVGCCVGGFLGD 336 (496)
T ss_pred HHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000001112345678888 47899999988 8889999999999999999999
Q ss_pred hhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHH
Q 017823 235 RLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQ 314 (365)
Q Consensus 235 r~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 314 (365)
|+|||+.+..+..+..+..+.+... .....+.........+.. +.+..+....+.+|.+|++.|+++.
T Consensus 337 r~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~ 404 (496)
T PRK03893 337 WLGTRKAYVCSLLISQLLIIPVFAI-----------GGANVWVLGLLLFFQQML-GQGISGLLPKLIGGYFDTEQRAAGL 404 (496)
T ss_pred HhcchHHHHHHHHHHHHHHHHHhhc-----------cccHHHHHHHHHHHHHHH-hcccchhhHHHHHhhCCHHHhhccc
Confidence 9999998887765555444333222 111122222222222222 2223334445668999999999999
Q ss_pred HHHHHH
Q 017823 315 IITVAA 320 (365)
Q Consensus 315 ~~~~~~ 320 (365)
|+.+..
T Consensus 405 ~~~~~~ 410 (496)
T PRK03893 405 GFTYNV 410 (496)
T ss_pred chhhhh
Confidence 887666
No 27
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.92 E-value=1.1e-23 Score=202.78 Aligned_cols=274 Identities=16% Similarity=0.140 Sum_probs=202.8
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.+++|.|+.+.+++.+++.++..+++++.|+++||+|||+.+..+.++..++..+.++++|++.++++|++.|++.+...
T Consensus 21 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 100 (399)
T TIGR00893 21 QEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFF 100 (399)
T ss_pred HHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhh
Confidence 45677789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+ ....++.|++|+++|++.+++.+....+|.++++.++..+.+ ..+||+.
T Consensus 101 ~---------------------------~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~~~~ 150 (399)
T TIGR00893 101 P---------------------------GIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI---HFSWQWA 150 (399)
T ss_pred h---------------------------HHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH---hCCchHH
Confidence 9 888999999999999999999999999999999999887763 3468887
Q ss_pred H----------------------H-------------------------------------hHHHHHHHHHHHHHHhccc
Q 017823 168 L----------------------K-------------------------------------YRLQFVMAILIPFFQHVTR 188 (365)
Q Consensus 168 f----------------------~-------------------------------------~~~~~~~~~~~~~~~~~~~ 188 (365)
+ + .+++..+......+.....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (399)
T TIGR00893 151 FIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIG 230 (399)
T ss_pred HHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhH
Confidence 7 0 0011222233333333445
Q ss_pred ccchhhcHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHH-HhHHHHHHHHHHHHHHHhhhcCC
Q 017823 189 INVISFYAPVLF-RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFL-VGGIQMLVSRVMIGSIMADQIGD 266 (365)
Q Consensus 189 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~-~~~~~~~i~~~~~~~~~~~~~~~ 266 (365)
......+.|.++ +..|.++.+.+ .......+..+++.++.++++||++||+... .......++.+.........
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 306 (399)
T TIGR00893 231 LGFFLTWFPTYLVQERGLSILEAG-FMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFAT--- 306 (399)
T ss_pred HHHHHHHHHHHHHHHhcccHHHhh-HHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHh---
Confidence 556666778777 45788888888 7888889999999999999999999996211 11111111111111110000
Q ss_pred CCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 267 HGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+ ..+..+.......+... ..+..+..+.+.+|.+|++.|+++.|+.+..
T Consensus 307 --~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 355 (399)
T TIGR00893 307 --N-YVNIPYAALALVALGFF--GLGAGAIGWALISDNAPGNIAGLTGGLINSL 355 (399)
T ss_pred --c-cchhHHHHHHHHHHHHh--chhhhhHHHHHHHhhcChhHHHHHHHHHHHH
Confidence 0 01122222222222222 2224566677889999999999999999888
No 28
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.92 E-value=6.5e-24 Score=212.34 Aligned_cols=273 Identities=10% Similarity=-0.055 Sum_probs=193.2
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHhhcc
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGA-----AFNIYMLIFGRVLLGVG 82 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~-----a~~~~~~~~~r~l~G~~ 82 (365)
.+++++|.++.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+..++ ++|++.+++.|++.|++
T Consensus 56 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 135 (467)
T PRK09556 56 ISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFF 135 (467)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHH
Confidence 4567778999999999999999999999999999999999998888888777776665 58999999999999999
Q ss_pred hhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCc
Q 017823 83 IGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGW 162 (365)
Q Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~ 162 (365)
.+...+ ....++.|++|+++||+++++.+.+..+|.++++++.....+.....
T Consensus 136 ~~~~~~---------------------------~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~ 188 (467)
T PRK09556 136 QSTGGP---------------------------CSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDG 188 (467)
T ss_pred Hhccch---------------------------HHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccC
Confidence 999988 88889999999999999999999999999999887765443211111
Q ss_pred chHHHH---------------------Hh--------------------------------------HHHHHHHHHHHHH
Q 017823 163 GWRISL---------------------KY--------------------------------------RLQFVMAILIPFF 183 (365)
Q Consensus 163 gwr~~f---------------------~~--------------------------------------~~~~~~~~~~~~~ 183 (365)
+||..| +. +++..+......+
T Consensus 189 ~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 268 (467)
T PRK09556 189 HVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANI 268 (467)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHH
Confidence 355444 00 0001111111122
Q ss_pred HhcccccchhhcHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhh
Q 017823 184 QHVTRINVISFYAPVLF-RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMAD 262 (365)
Q Consensus 184 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~ 262 (365)
...........|.|.|+ ++.|++..++. .......++.+++.++.|+++||++||+..........+....+....
T Consensus 269 ~~~~~~~~~~~~~p~yl~~~~g~s~~~a~-~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~-- 345 (467)
T PRK09556 269 FLYIVRIGIDNWSPVYAFQELGFSKEDAI-NTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQH-- 345 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHh--
Confidence 22223345667899888 55799998888 788888899999999999999999999877655444333322222110
Q ss_pred hcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 263 QIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
. .+.+...+..+..+.... +..........|.+|++.|+++.|+.+..
T Consensus 346 --------~-~~~~~~~~~~~~~G~~~~-~~~~~~~~~~~~~~p~~~~g~a~gi~~~~ 393 (467)
T PRK09556 346 --------A-TSEYMYLASLFALGFLVF-GPQLLIGVAAVGFVPKKAIGVANGIKGTF 393 (467)
T ss_pred --------c-CcHHHHHHHHHHHHHHHh-hHHHHHHHHHHhhcchhhHHHHHHHHHHH
Confidence 0 112222233333332221 11111123456999999999999999877
No 29
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.91 E-value=3.4e-23 Score=205.31 Aligned_cols=269 Identities=12% Similarity=0.043 Sum_probs=194.9
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
+++|+|+++.+++.+.+.++..+++++.|++.||+|||+++..+.++..++.++.++++|++.+.+.|++.|++.|...+
T Consensus 51 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~ 130 (434)
T PRK11663 51 ADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWP 130 (434)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccch
Confidence 45777899999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
....++.|++|+++|++++++.+.+..+|..+++.+...+. +.+|||+.|
T Consensus 131 ---------------------------~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~---~~~gw~~~f 180 (434)
T PRK11663 131 ---------------------------VCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIA---LHYGWRYGM 180 (434)
T ss_pred ---------------------------HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcccHHHHH
Confidence 78888999999999999999999999999999999888876 346799887
Q ss_pred ---------------------HhH---------------------------H----------HHHHHHHHHHHHhccccc
Q 017823 169 ---------------------KYR---------------------------L----------QFVMAILIPFFQHVTRIN 190 (365)
Q Consensus 169 ---------------------~~~---------------------------~----------~~~~~~~~~~~~~~~~~~ 190 (365)
+.+ + +..+......+.......
T Consensus 181 ~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (434)
T PRK11663 181 MIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRA 260 (434)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 000 0 111222222222222334
Q ss_pred chhhcHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhh--CcchHH-HHhHHHHHHHHHHHHHHHhhhcCC
Q 017823 191 VISFYAPVLF-RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRL--GRKVLF-LVGGIQMLVSRVMIGSIMADQIGD 266 (365)
Q Consensus 191 ~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--grr~~l-~~~~~~~~i~~~~~~~~~~~~~~~ 266 (365)
....|.|.++ ++.|++..++. .......++..+++++.|+++||+ ++|+.. ....+...+....+....
T Consensus 261 ~~~~~~p~~l~~~~g~s~~~a~-~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~------ 333 (434)
T PRK11663 261 AINDWGNLYMSETLGVDLVTAN-SAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMP------ 333 (434)
T ss_pred HHHHHHHHHHHhccCCCHHHHH-HHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcc------
Confidence 5556788888 56799998888 888889999999999999999999 333332 222222222222221110
Q ss_pred CCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 267 HGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
. .............+++ ..+..........|.+|++.|+++.|+.+..
T Consensus 334 ----~-~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 381 (434)
T PRK11663 334 ----F-ASYVMQAACFFTIGFF-VFGPQMLIGMAAAECSHKEAAGAATGFVGLF 381 (434)
T ss_pred ----c-ccHHHHHHHHHHHHHH-HhhHHHHHHHHHHhcccHhhHHhHHHHHHHH
Confidence 0 1111111222222221 1111222234558999999999999999877
No 30
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.91 E-value=1.1e-23 Score=210.57 Aligned_cols=271 Identities=17% Similarity=0.147 Sum_probs=209.8
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
+++|.|..+.+++.+.+.++..++.++.|+++||+|||+.+..+..+..++.+++++++|++.++++|+++|++.+...+
T Consensus 30 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~ 109 (485)
T TIGR00711 30 GDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIP 109 (485)
T ss_pred HhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHH
Confidence 45677799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
....++.|++|+++|+++.++.+.+..+|..+++.+++.+. ++++||+.|
T Consensus 110 ---------------------------~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~---~~~~w~~~f 159 (485)
T TIGR00711 110 ---------------------------LSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWII---ENYHWRWIF 159 (485)
T ss_pred ---------------------------HHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhc---cCcCceehh
Confidence 88899999999999999999999999999999999998887 445788766
Q ss_pred ------------------HhH-H---------------------------------------------------------
Q 017823 169 ------------------KYR-L--------------------------------------------------------- 172 (365)
Q Consensus 169 ------------------~~~-~--------------------------------------------------------- 172 (365)
+.+ +
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (485)
T TIGR00711 160 LINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWE 239 (485)
T ss_pred hhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 000 0
Q ss_pred ---------------HHHHHHHHHHHHhcccccchhhcHHHHHHH-cCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 017823 173 ---------------QFVMAILIPFFQHVTRINVISFYAPVLFRT-IKLSESTSLLMSAIVTGSLGTISTSLSMILADRL 236 (365)
Q Consensus 173 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 236 (365)
+.+....+..+...........+.|.++++ .|.++.+.+ .......++.+++.++.+++.||+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g-~~~~~~~~~~~~~~~~~g~l~~r~ 318 (485)
T TIGR00711 240 LTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAG-LHILPVGLAPMLSSPIAGRMGDKI 318 (485)
T ss_pred HcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhc
Confidence 000000111111122233445677888754 689999988 888889999999999999999999
Q ss_pred CcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHH
Q 017823 237 GRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQII 316 (365)
Q Consensus 237 grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~ 316 (365)
|||+.+..+..+..++...+.... + ++...+.......+.+++.+....+.... ..|..|+++|+++.|+
T Consensus 319 ~~~~~~~~g~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~l~g~g~~~~~~~~~~~-~~~~~~~~~~g~~~~~ 388 (485)
T TIGR00711 319 DPRKLVTIGLILYAVGFYWRAFTF--------T-PDTPFLAIALPQFIRGFGMGCFFMPLTTI-ALSGLPPHKIARGSSL 388 (485)
T ss_pred CcHHHHHHHHHHHHHHHHHHhccC--------C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCHHHHhHHHHH
Confidence 999998888877777766655221 0 11122333344455555555444455433 3677899999999999
Q ss_pred HHHH
Q 017823 317 TVAA 320 (365)
Q Consensus 317 ~~~~ 320 (365)
.+..
T Consensus 389 ~~~~ 392 (485)
T TIGR00711 389 SNFT 392 (485)
T ss_pred HHHH
Confidence 8887
No 31
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.91 E-value=6.1e-23 Score=199.96 Aligned_cols=220 Identities=15% Similarity=0.110 Sum_probs=176.7
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.+++|.|.++.+++.+.+.++..+++++.|+++||+|||+++..+..+.+++.+++++++|++.+++.|++.|++.+...
T Consensus 30 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~ 109 (382)
T PRK10091 30 AHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFF 109 (382)
T ss_pred HHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHH
Confidence 34567779999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+ ....++.|+.|+++|+++++....+..+|..++++++..+. +..+||+.
T Consensus 110 ~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~---~~~gwr~~ 159 (382)
T PRK10091 110 G---------------------------VGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLS---QEFSWRYT 159 (382)
T ss_pred H---------------------------HHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHh---hhccHHHH
Confidence 8 67777899999999999999999999999999999988877 34579998
Q ss_pred H------------------H---------h-------HHHHHHHHHHHHHHhcccccchhhcHHHHH-HHcCCCcchhhH
Q 017823 168 L------------------K---------Y-------RLQFVMAILIPFFQHVTRINVISFYAPVLF-RTIKLSESTSLL 212 (365)
Q Consensus 168 f------------------~---------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~ 212 (365)
| + . +++..+......+...........|.+.++ +..|.++++.+
T Consensus 160 f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~- 238 (382)
T PRK10091 160 FLLIAVFNIAVLASIYFWVPDIRDEAKGGLREQFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMT- 238 (382)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcccccCHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH-
Confidence 8 0 0 011111222111111112222233444444 55799998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHH
Q 017823 213 MSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGS 258 (365)
Q Consensus 213 ~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~ 258 (365)
......+++.++++++.+++.||+++|+.+..+..+..++.+.+..
T Consensus 239 ~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~ 284 (382)
T PRK10091 239 FIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFF 284 (382)
T ss_pred HHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999999988887777776655543
No 32
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.91 E-value=1.6e-23 Score=206.22 Aligned_cols=293 Identities=10% Similarity=-0.020 Sum_probs=211.6
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHhhcchh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGA-----AFNIYMLIFGRVLLGVGIG 84 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~-----a~~~~~~~~~r~l~G~~~g 84 (365)
+.+.|+.+.|++.+.+.++..+++++.|+++||+|||+.+..+..+.+++.+..+. .++++.+++.|++.|++.+
T Consensus 46 ~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 125 (417)
T PRK10489 46 MMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGS 125 (417)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHH
Confidence 34556899999999999999999999999999999999998888777776655432 4678899999999999988
Q ss_pred hhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcch
Q 017823 85 FANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGW 164 (365)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gw 164 (365)
...+ ....++.|+.|+++|+++.++.+....+|..+|+.+++.+.+. .+|
T Consensus 126 ~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~---~~~ 175 (417)
T PRK10489 126 LGVT---------------------------ALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAA---GGV 175 (417)
T ss_pred HHHH---------------------------HHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH---Hhh
Confidence 8888 7788899999999999999999999999999999998877632 346
Q ss_pred HHHH-----------------H-----------------------hHHHHHHHHHHHHHHhcccccchhhcHHHHHHH-c
Q 017823 165 RISL-----------------K-----------------------YRLQFVMAILIPFFQHVTRINVISFYAPVLFRT-I 203 (365)
Q Consensus 165 r~~f-----------------~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 203 (365)
++.+ + .+++.+.......+... .......+.|.+.++ .
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~ 254 (417)
T PRK10489 176 AWNYGLAAAGTFITLLPLLRLPALPPPPQPREHPLRSLLAGFRFLLASPVVGGIALLGGLLT-MASAVRVLYPALADEVW 254 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCcccccchHHHHHHHHHHHcChHHHHHHHHHHHHH-HHHhHHHhhHHHHHhcc
Confidence 6666 0 01111111111111111 123445577888876 7
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHH
Q 017823 204 KLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLIC 283 (365)
Q Consensus 204 g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (365)
|.++...+ .......++.+++.++.+++.||.++++.+..+.++..++.+.+... ++.+...+..+
T Consensus 255 g~~~~~~g-~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 320 (417)
T PRK10489 255 QMGAAQIG-LLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLM-------------PMWILAVLCLA 320 (417)
T ss_pred CCChhHhH-HHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHcc-------------chHHHHHHHHH
Confidence 99988888 78888899999999999999999877777777776666665554432 12233344444
Q ss_pred HHHHhhccccccccccccccCCChhhhhHHHHHHHHH-----------------------------HHHHHHHHHHHhhc
Q 017823 284 VYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA-----------------------------GVFFFLTTFMHFFL 334 (365)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~-----------------------------~~f~~~~~~~~~~~ 334 (365)
+++.+.+. ..+....+..|..|++.|+++.|+.+.. .+..+.+++....+
T Consensus 321 ~~g~~~~~-~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 321 LFGYLSAI-SSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHH-HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhc
Confidence 44444332 2334456668999999999999998776 11111345556677
Q ss_pred ccCCCCChHHHHHH
Q 017823 335 PETKNVPIELMDKC 348 (365)
Q Consensus 335 ~et~~~~~~~~~~~ 348 (365)
||+|+++++|++++
T Consensus 400 ~~~~~~~~~~~~~~ 413 (417)
T PRK10489 400 GELRRFRQTPPEVD 413 (417)
T ss_pred ccccccccccccCC
Confidence 88888777766554
No 33
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.91 E-value=1.8e-23 Score=199.20 Aligned_cols=271 Identities=20% Similarity=0.320 Sum_probs=209.8
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.+++|.|+.+.+++.+++.++..+++++.|+++||+|||+++..+..+.+++..+..+++|.+.++++|++.|++.+...
T Consensus 24 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 103 (352)
T PF07690_consen 24 AEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFS 103 (352)
T ss_dssp HCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhcccccccccccc
Confidence 45677789999999999999999999999999999999999999999999997777777888899999999999999999
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+ ....++.|+.|+++|++.++..+.+..+|.++++.++..+. +..+||+.
T Consensus 104 ~---------------------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~---~~~~~~~~ 153 (352)
T PF07690_consen 104 P---------------------------ASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLI---SYFGWRWA 153 (352)
T ss_dssp H---------------------------HHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCC---CHCHHCCH
T ss_pred c---------------------------cccccccccchhhhhhhccccccchhhhhhhcccchhhhhh---hccccccc
Confidence 9 89999999999999999999999999999999999999887 34568888
Q ss_pred H-------------------------------Hh----------------HHHHHHHHHHHHHHhcccccchhhcHHHH-
Q 017823 168 L-------------------------------KY----------------RLQFVMAILIPFFQHVTRINVISFYAPVL- 199 (365)
Q Consensus 168 f-------------------------------~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 199 (365)
+ +. +++..+......+...........+.|.+
T Consensus 154 ~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (352)
T PF07690_consen 154 FLISAILSLIAAILFILFLPEPPPPRERESPKESESKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYL 233 (352)
T ss_dssp HHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccccchhhhhhhhHhhhhhhcccccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhh
Confidence 7 11 11111112222332223445577788887
Q ss_pred HHHcCCC-cchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHH
Q 017823 200 FRTIKLS-ESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLI 278 (365)
Q Consensus 200 ~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (365)
.+..|.+ ..+.. .......+..+++.++.+++.||+++|+..........+..+.+.... ..++....
T Consensus 234 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 302 (352)
T PF07690_consen 234 QEVLGFSGPSQAG-LLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLP----------FSSSPVWL 302 (352)
T ss_dssp CHHHHCCTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSH----------HHCHHHHH
T ss_pred hhccCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHH----------HhhhHHHH
Confidence 4778888 66777 788888999999999999999999998877776666666555554432 11123333
Q ss_pred HHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 279 LVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.....+.+++.+.. .+....+..|..|+++|+++.|+.+..
T Consensus 303 ~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~ 343 (352)
T PF07690_consen 303 IIALFLIGFGFGIV-FPILFSLIQELVPPEYRGTAFGLFNSI 343 (352)
T ss_dssp HHHHHHHHHHHHHH-CHHHHHHHHCCCHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 44444455554443 444566778999999999999998876
No 34
>PRK10504 putative transporter; Provisional
Probab=99.91 E-value=4.3e-23 Score=206.22 Aligned_cols=270 Identities=13% Similarity=0.115 Sum_probs=204.4
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
+++|.|+.+.+++.+.+.++..++.++.|+++||+|||+++..+..+.+++.+.++++++++.++++|+++|++.+...+
T Consensus 38 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~ 117 (471)
T PRK10504 38 QSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVP 117 (471)
T ss_pred HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHH
Confidence 35677799999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
....++.|++|+++|+++.+.......+|..+++.+++.+.+ ..+||+.|
T Consensus 118 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~---~~gw~~~f 167 (471)
T PRK10504 118 ---------------------------VGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE---YASWHWIF 167 (471)
T ss_pred ---------------------------HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh---hccHHHHH
Confidence 888888999999999999999999999999999999988874 45799888
Q ss_pred -----------------------H-hH-----------------------------------------------------
Q 017823 169 -----------------------K-YR----------------------------------------------------- 171 (365)
Q Consensus 169 -----------------------~-~~----------------------------------------------------- 171 (365)
+ .|
T Consensus 168 ~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (471)
T PRK10504 168 LINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARN 247 (471)
T ss_pred HHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0 00
Q ss_pred ------------HHHHHHHHHHHHHhcccccchhhcHHHHHH-HcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCc
Q 017823 172 ------------LQFVMAILIPFFQHVTRINVISFYAPVLFR-TIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGR 238 (365)
Q Consensus 172 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr 238 (365)
++.+.......+...........+.|++++ ..|.++...+ .......+...++.++.+++.||+||
T Consensus 248 ~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~l~~r~g~ 326 (471)
T PRK10504 248 NNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAG-LMMIPMVLGSMGMKRIVVQVVNRFGY 326 (471)
T ss_pred CCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 000111111111112223344456788886 4788888888 77888888888888999999999999
Q ss_pred chHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHH
Q 017823 239 KVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITV 318 (365)
Q Consensus 239 r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~ 318 (365)
|+.+..+.....+....+.... ..+..+...+...+.+.+.+...++. .....+.+|++.++++.++.+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~ 395 (471)
T PRK10504 327 RRVLVATTLGLALVSLLFMLVA----------LLGWYYLLPFVLFLQGMVNSTRFSSM-NTLTLKDLPDNLASSGNSLLS 395 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHhcc----------ccccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCHHhccchHHHHH
Confidence 9999888877777666555431 01112222222333334444444444 355578899999999988877
Q ss_pred HH
Q 017823 319 AA 320 (365)
Q Consensus 319 ~~ 320 (365)
..
T Consensus 396 ~~ 397 (471)
T PRK10504 396 MI 397 (471)
T ss_pred HH
Confidence 66
No 35
>PRK12382 putative transporter; Provisional
Probab=99.91 E-value=1.3e-22 Score=198.01 Aligned_cols=266 Identities=14% Similarity=0.113 Sum_probs=194.9
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH--------hhhHHHHHHHHHHh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGA--------AFNIYMLIFGRVLL 79 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~--------a~~~~~~~~~r~l~ 79 (365)
.+++|.|..+.|++.+.+.++..+++++.|+++||+||||.+..+.....++.+.... .+|++.++++|+++
T Consensus 43 ~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 122 (392)
T PRK12382 43 HHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLIL 122 (392)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHH
Confidence 4567788999999999999999999999999999999999999988877766543321 36889999999999
Q ss_pred hcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcccc
Q 017823 80 GVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIK 159 (365)
Q Consensus 80 G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 159 (365)
|++.+...+ ...+++.|+.|+|+|+++++..+.+...|..++++++..+.
T Consensus 123 G~~~~~~~~---------------------------~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~--- 172 (392)
T PRK12382 123 GFGESQLLT---------------------------GALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLH--- 172 (392)
T ss_pred HHHHHHHHH---------------------------HHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHH---
Confidence 999998888 77788899999999999999999999999999999988876
Q ss_pred CCcchHHHH--------------H-------------hHHHH---HHHHHHHHHHhcccccchhhcHHHHHHHcCCCcch
Q 017823 160 VGWGWRISL--------------K-------------YRLQF---VMAILIPFFQHVTRINVISFYAPVLFRTIKLSEST 209 (365)
Q Consensus 160 ~~~gwr~~f--------------~-------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 209 (365)
+..|||..+ + ..++. ....................+.|.++++.+.++
T Consensus 173 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-- 250 (392)
T PRK12382 173 SHFGFAALALTTMVLPLLAWAFNGTVRKVPAHAGERPSLWSVVGLIWKPGLGLALQGVGFAVIGTFVSLYFASKGWAM-- 250 (392)
T ss_pred hccChHHHHHHHHHHHHHHHHHHHhccCCCCCcccCchHHHHHHHHHHhHHHHHHHHHHHhHHHHHHHHHHHhcCCch--
Confidence 345788765 0 00011 111111111111233445566777777766653
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhh
Q 017823 210 SLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGF 289 (365)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (365)
.. .......++.++++++.+++.||+|+|+.+..+..+..++.+.+... ++.+...+...+.+.+.
T Consensus 251 ~~-~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~g~~~ 316 (392)
T PRK12382 251 AG-FTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLA-------------PTAWVALAGAALTGAGC 316 (392)
T ss_pred hH-HHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHc-------------ccHHHHHHHHHHHHHHH
Confidence 34 45566777888999999999999999999888877777776655442 11233344444555554
Q ss_pred ccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 290 AFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 290 ~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+..... ......|..|+++|+++.|+.+..
T Consensus 317 ~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~~ 346 (392)
T PRK12382 317 SLIFPA-LGVEVVKRVPSQVRGTALGGYAAF 346 (392)
T ss_pred HhHHHH-HHHHHHHhcCHHHHHHHHHHHHHH
Confidence 433333 334457889999999999998876
No 36
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.91 E-value=8.8e-23 Score=197.44 Aligned_cols=272 Identities=14% Similarity=0.107 Sum_probs=205.4
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.+++|.|+.+.+++.+.+.++..+++++.|++.||+|||+.+..+.++..++.+..+++++++.+.+.|++.|++.+...
T Consensus 32 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~ 111 (385)
T TIGR00710 32 AADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGS 111 (385)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHH
Confidence 35677789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+ ....++.|++|+++|++..+..+....+|..+++.++..+. +..+||..
T Consensus 112 ~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~---~~~~~~~~ 161 (385)
T TIGR00710 112 V---------------------------ISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYIL---VWLSWHAI 161 (385)
T ss_pred H---------------------------HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHcCHHHH
Confidence 9 88899999999999999999999999999999999998876 33569987
Q ss_pred H------------------------H---------------hHHHHHHHHHHHHHHhcccccchhhcHHHHH-HHcCCCc
Q 017823 168 L------------------------K---------------YRLQFVMAILIPFFQHVTRINVISFYAPVLF-RTIKLSE 207 (365)
Q Consensus 168 f------------------------~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~ 207 (365)
+ . .+++..+..................+.|.++ ++.|.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 241 (385)
T TIGR00710 162 FAFLSLAGILLSALIFFILPETLPYEARIQISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSP 241 (385)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCcccCCHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCH
Confidence 7 0 0011112222222222223344455667766 4688998
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHH
Q 017823 208 STSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKA 287 (365)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (365)
.+.+ .......+..+++.++.+++.||++||+.+..+.....++.+.+...... .............+.+.
T Consensus 242 ~~~g-~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~g~ 312 (385)
T TIGR00710 242 SVFG-LLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAIL--------GLGSWAMIIGPMMFVGI 312 (385)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHh--------ccchHHHHHHHHHHHHH
Confidence 8888 78888899999999999999999999998888877777666655543210 10112222333334444
Q ss_pred hhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 288 GFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 288 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+.+... +.......|..| +.|+++.++.+..
T Consensus 313 ~~~~~~-~~~~~~~~~~~~-~~~g~~~~~~~~~ 343 (385)
T TIGR00710 313 GNSMIS-SIAMAYALEDFP-HVAGTASALFGTL 343 (385)
T ss_pred HHHHHH-HHHHHHHhccCc-ccchHHHHHHHHH
Confidence 444333 333445567777 5689999887766
No 37
>PRK03699 putative transporter; Provisional
Probab=99.90 E-value=1.8e-22 Score=197.50 Aligned_cols=219 Identities=10% Similarity=0.006 Sum_probs=177.1
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.+++++|.++.+++.+.+.+++.+++++.|++.||+|||+.+..+..+..++.++.+++++++.++++|++.|++.+...
T Consensus 34 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~ 113 (394)
T PRK03699 34 AEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITM 113 (394)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhc
Confidence 35677789999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+ ....++.|++|+++|++..+..+....+|..+++.+...+.. +..+||+.
T Consensus 114 ~---------------------------~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~--~~~gw~~~ 164 (394)
T PRK03699 114 S---------------------------IGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLA--RSIEWYWV 164 (394)
T ss_pred c---------------------------chhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccccHHHH
Confidence 8 788888999999999999999888889998888888766542 23579998
Q ss_pred H-------------------Hh----------------HHHHHHHHHHHHHHhcccccchhhcHHHHH-HHcCCCcchhh
Q 017823 168 L-------------------KY----------------RLQFVMAILIPFFQHVTRINVISFYAPVLF-RTIKLSESTSL 211 (365)
Q Consensus 168 f-------------------~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~ 211 (365)
| +. +++..+......+...........|.|.++ ++.|+++.+.+
T Consensus 165 f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~ 244 (394)
T PRK03699 165 YACIGLVYVAIFILTLFSEFPALGKHAPKADKPVAKEKWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAG 244 (394)
T ss_pred HHHHHHHHHHHHHHHHhcCCccccccCccccCccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhh
Confidence 8 00 011122222223332334455667899998 55799999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHH
Q 017823 212 LMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMI 256 (365)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~ 256 (365)
.......++..+++++.++++||++||+.+.....+..+....+
T Consensus 245 -~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~ 288 (394)
T PRK03699 245 -NLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLF 288 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH
Confidence 78888889999999999999999999998877665555544333
No 38
>TIGR00895 2A0115 benzoate transport.
Probab=99.90 E-value=2e-22 Score=195.02 Aligned_cols=267 Identities=21% Similarity=0.199 Sum_probs=202.7
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
+++|.|+.+.+++.+...++..+++++.|+++||+|||+.+..+..+..++.++..++++++.+++.|++.|++.+...+
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 124 (398)
T TIGR00895 45 AEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMP 124 (398)
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchh
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
....++.|+.|+++|++++++.+.+..+|..+++.++..+.+ ..+||..+
T Consensus 125 ---------------------------~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~g~~~~~ 174 (398)
T TIGR00895 125 ---------------------------NLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIP---VFGWRSLF 174 (398)
T ss_pred ---------------------------hHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhh---cccceeeh
Confidence 888999999999999999999999999999999999877763 34566544
Q ss_pred ----------------------H---hH--------------------------------------H--------HHHHH
Q 017823 169 ----------------------K---YR--------------------------------------L--------QFVMA 177 (365)
Q Consensus 169 ----------------------~---~~--------------------------------------~--------~~~~~ 177 (365)
+ .+ + +....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (398)
T TIGR00895 175 YVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVL 254 (398)
T ss_pred hhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHH
Confidence 0 00 0 00111
Q ss_pred HHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHH
Q 017823 178 ILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIG 257 (365)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~ 257 (365)
.....+...........+.|.+.++.|.++++.. .......++.+++.++.++++||++||+..... ....+....+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~ 332 (398)
T TIGR00895 255 LWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAA-TGGALFNFGGVIGSIIFGWLADRLGPRVTALLL-LLGAVFAVLVG 332 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH-HHHHHHHHHHH
Confidence 1122222233445556678877788899988888 888889999999999999999999999544433 33333333322
Q ss_pred HHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 258 SIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
... ...+......++.+.+.+... +....+..|.+|++.|+++.|+.+..
T Consensus 333 ~~~------------~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~ 382 (398)
T TIGR00895 333 STL------------FSPTLLLLLGAIAGFFVNGGQ-SGLYALMALFYPTAIRATGVGWAIGI 382 (398)
T ss_pred HHh------------hCHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcCCHHHHHHHHHHHHHH
Confidence 211 112333444445555554443 34466779999999999999998877
No 39
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.90 E-value=5e-23 Score=196.14 Aligned_cols=271 Identities=13% Similarity=0.068 Sum_probs=214.6
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.++.++|.+|+|.+.+.+++.+.++..+.|.++||.++|+.+..++.+.++.+++.+++++.+.+.+..++.|+..|...
T Consensus 56 ~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gw 135 (448)
T COG2271 56 IEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGW 135 (448)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHh--hhhccccCCcchH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLN--YGTQKIKVGWGWR 165 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~--~~~~~~~~~~gwr 165 (365)
| .+...+..|+|+++||+..++++.+.++|..+.+++. ..+. .+.+||
T Consensus 136 p---------------------------p~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~---~~~~w~ 185 (448)
T COG2271 136 P---------------------------PCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFA---FHGGWR 185 (448)
T ss_pred c---------------------------HHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHH---hccchh
Confidence 9 9999999999999999999999999999999999988 5555 334799
Q ss_pred HHH-----------------------------------------------------------HhHHHHHHHHHHHHHHhc
Q 017823 166 ISL-----------------------------------------------------------KYRLQFVMAILIPFFQHV 186 (365)
Q Consensus 166 ~~f-----------------------------------------------------------~~~~~~~~~~~~~~~~~~ 186 (365)
..| ..+++.++.+.+......
T Consensus 186 ~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvY 265 (448)
T COG2271 186 AAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVY 265 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHH
Confidence 998 123344555555544444
Q ss_pred ccccchhhcHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhh--CcchHHHHhHHHHHHHHHHHHHHHhhh
Q 017823 187 TRINVISFYAPVLF-RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRL--GRKVLFLVGGIQMLVSRVMIGSIMADQ 263 (365)
Q Consensus 187 ~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--grr~~l~~~~~~~~i~~~~~~~~~~~~ 263 (365)
..-..+..|.|.|+ +..|++...+. ...+.+-.++++|+++.|+++||+ |||....+.+.+.....+...+..
T Consensus 266 ivR~gi~dW~p~YL~e~k~~s~~~a~-~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~--- 341 (448)
T COG2271 266 VVRYGINDWGPLYLSEVKGFSLVKAN-WAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLA--- 341 (448)
T ss_pred HHHHHHhhhHHHHHHHhcCCCHHHHH-HHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcC---
Confidence 55677888999999 56799999999 999999999999999999999997 677555444433333333333321
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 264 IGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
++.+.+...+++.+.++.. .+...+.-..+.|..|++.-|++.|+...+
T Consensus 342 -------~~~~~~l~~~~l~~iGf~I-yGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf 390 (448)
T COG2271 342 -------PNGSYLLDAILLFIIGFLI-YGPQMLIGLAAAEFVPKKAAGTATGFVGLF 390 (448)
T ss_pred -------CCccHHHHHHHHHHHHHHH-hhHHHHHHHHHhccccHhhccchhchhhhH
Confidence 2223344444444433332 233334455678999999999999988877
No 40
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.90 E-value=1.2e-22 Score=203.93 Aligned_cols=203 Identities=12% Similarity=0.004 Sum_probs=153.1
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.+++|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++.+++++++.++++|++.|++.+...
T Consensus 63 ~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~ 142 (476)
T PLN00028 63 RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFV 142 (476)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH
Confidence 34667779999999999999999999999999999999999999999999999999999999999999999999887643
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhc----cc--cCC
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQ----KI--KVG 161 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~----~~--~~~ 161 (365)
+ ...++.|++|+++|++++++......+|..+++.+...+. +. .+.
T Consensus 143 ~----------------------------~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~ 194 (476)
T PLN00028 143 S----------------------------CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSF 194 (476)
T ss_pred H----------------------------HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcch
Confidence 3 4456789999999999999987766666666655443332 11 112
Q ss_pred cchHHHH------------------Hh--------------------HH--------HHHHHHHHHHHHhcccccchhhc
Q 017823 162 WGWRISL------------------KY--------------------RL--------QFVMAILIPFFQHVTRINVISFY 195 (365)
Q Consensus 162 ~gwr~~f------------------~~--------------------~~--------~~~~~~~~~~~~~~~~~~~~~~~ 195 (365)
.|||+.| +. ++ +..+......+...........+
T Consensus 195 ~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (476)
T PLN00028 195 TAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYRELKKSGTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNI 274 (476)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchhhHHhcCccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhH
Confidence 4799998 00 00 00111111111112222334456
Q ss_pred HHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcc
Q 017823 196 APVLF-RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRK 239 (365)
Q Consensus 196 ~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr 239 (365)
.|.++ ++.|+++.++. ....+..++.+++++++|+++||++||
T Consensus 275 ~p~~l~~~~g~s~~~a~-~~~~~~~~~~~ig~~~~G~lsDr~~~r 318 (476)
T PLN00028 275 IAEYFYDRFGLSLETAG-AIAASFGLMNLFARPAGGYLSDVAARR 318 (476)
T ss_pred HHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 77776 55699999888 888899999999999999999999875
No 41
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.90 E-value=3.4e-22 Score=195.82 Aligned_cols=263 Identities=16% Similarity=0.122 Sum_probs=192.2
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.+++|.|+++.++..+.+.++..+++++.|++.||+|||+.+..+..+.+++.++.++++|++.++++|++.|++.+...
T Consensus 47 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~ 126 (394)
T PRK10213 47 AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFW 126 (394)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHH
Confidence 35677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+ ....++.|++|+|+|+++++....+.++|..+++.++..+. +.++||+.
T Consensus 127 ~---------------------------~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~---~~~gw~~~ 176 (394)
T PRK10213 127 A---------------------------MSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLG---ELIGWRNV 176 (394)
T ss_pred H---------------------------HHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hhcCHHHH
Confidence 9 88889999999999999999999999999999999999887 44679988
Q ss_pred H----------------------------------HhHHHHHHHHHHHHHHhcccccchhhc-HHHHHHHcCCCcchhhH
Q 017823 168 L----------------------------------KYRLQFVMAILIPFFQHVTRINVISFY-APVLFRTIKLSESTSLL 212 (365)
Q Consensus 168 f----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~ 212 (365)
| ..+++.++...+..+...........+ .|.+.++.|+++++.+
T Consensus 177 f~~~~~l~~~~~l~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g- 255 (394)
T PRK10213 177 FNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLT- 255 (394)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCcccccchhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHH-
Confidence 8 001222222222222222222333334 5777788899998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccc
Q 017823 213 MSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFS 292 (365)
Q Consensus 213 ~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (365)
......+++.+++..+.+++.||.+ |+.+..+........+.+.... +..+.......+.+++++..
T Consensus 256 ~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~------------~~~~~~~~~~~l~G~~~~~~ 322 (394)
T PRK10213 256 LVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWG------------SDKIVATGVAIIWGLTFALV 322 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHh------------hhHHHHHHHHHHHHHHHHhh
Confidence 7788888999999999999999954 4443333333333322222221 22334444555556565444
Q ss_pred cccccccccccCCChhhhhHHHHH
Q 017823 293 WGPLRWLVPSENFPLEIISAGQII 316 (365)
Q Consensus 293 ~~~~~~~~~~e~~p~~~r~~~~~~ 316 (365)
.... .....+..|++ +++..+.
T Consensus 323 ~~~~-~~~~~~~~~~~-~~~~~~~ 344 (394)
T PRK10213 323 PVGW-STWITRSLADQ-AEKAGSI 344 (394)
T ss_pred hHHH-HHHHHHHCccc-HHHHHHH
Confidence 3333 32345667743 3444443
No 42
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.90 E-value=4.5e-22 Score=192.60 Aligned_cols=270 Identities=14% Similarity=0.121 Sum_probs=197.3
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
+++|+|+++.+++.+.+.++..+++++.|+++||+|||+.+..+..+..++.+...++++++.+++.|++.|++.+...+
T Consensus 19 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 98 (377)
T PRK11102 19 ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASV 98 (377)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHH
Confidence 45677799999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
....++.|++|+++|+++.++.+....+|..+++.++..+.+ .++||..+
T Consensus 99 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~~~~~ 148 (377)
T PRK11102 99 ---------------------------VINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV---WFSWHAIF 148 (377)
T ss_pred ---------------------------HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcChHHHH
Confidence 788889999999999999999999999999999999888773 35688887
Q ss_pred -----------------------H------------------hHHHHHHHHHHHHHHhcccccchhhcHHHHH-HHcCCC
Q 017823 169 -----------------------K------------------YRLQFVMAILIPFFQHVTRINVISFYAPVLF-RTIKLS 206 (365)
Q Consensus 169 -----------------------~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~ 206 (365)
+ .+++............+........+.|.++ +..|.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s 228 (377)
T PRK11102 149 WVLALAAILAAALVFFFIPETLPKERRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVS 228 (377)
T ss_pred HHHHHHHHHHHHHHHHhCCccCcccccCCCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCC
Confidence 0 0011112222222222223334444555555 557999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHH
Q 017823 207 ESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYK 286 (365)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (365)
+++.+ .......+..+++.++.+++.||+|||+.+..+.....+..+.+..... .+...+...+...++.
T Consensus 229 ~~~~g-~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~ 298 (377)
T PRK11102 229 PQNFG-YYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSAL---------LDLGFWALVVGVAAFV 298 (377)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH---------HhhhHHHHHHHHHHHH
Confidence 98888 8888899999999999999999999999888877654444333322210 0011222222332332
Q ss_pred HhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 287 AGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 287 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.+.+..... ......|..| +.++++.++.+..
T Consensus 299 ~~~~~~~~~-~~~~~~~~~~-~~~g~~~~~~~~~ 330 (377)
T PRK11102 299 GCVSMISSN-AMAVILDEFP-HMAGTASSLAGTL 330 (377)
T ss_pred HHHHHhhHH-HHHHHhcccc-ccchHHHHHHHHH
Confidence 322222222 2234467766 7889888887664
No 43
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.90 E-value=9.1e-24 Score=202.22 Aligned_cols=303 Identities=22% Similarity=0.274 Sum_probs=225.8
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhh-------HHHHHHHHHHhhcchh
Q 017823 12 KFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFN-------IYMLIFGRVLLGVGIG 84 (365)
Q Consensus 12 ~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~-------~~~~~~~r~l~G~~~g 84 (365)
++++...+.+..+.++|..+|+++.|+++||+|||+++...+.+..+++++++++.. .+++.+.|+++|+|.|
T Consensus 80 ~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIG 159 (538)
T KOG0252|consen 80 HYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIG 159 (538)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhcccc
Confidence 466788899999999999999999999999999999999999999999998887622 4788889999999999
Q ss_pred hhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcc----ccC
Q 017823 85 FANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQK----IKV 160 (365)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~----~~~ 160 (365)
+-+| .+.+..+|.+..++||...+..-...+.|.+.|..++..+.. ..+
T Consensus 160 GDYP---------------------------lSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~ 212 (538)
T KOG0252|consen 160 GDYP---------------------------LSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFN 212 (538)
T ss_pred CCCc---------------------------chHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCC
Confidence 9999 888999999999999998888877777777777776655432 111
Q ss_pred --------CcchHHHH----------------------------------------------------------------
Q 017823 161 --------GWGWRISL---------------------------------------------------------------- 168 (365)
Q Consensus 161 --------~~gwr~~f---------------------------------------------------------------- 168 (365)
..-||..+
T Consensus 213 ~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~ 292 (538)
T KOG0252|consen 213 GPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFG 292 (538)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccc
Confidence 12599888
Q ss_pred ------HhH-HHHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHH-----HH----HHHHHHHHHHHHHHHHH
Q 017823 169 ------KYR-LQFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLM-----SA----IVTGSLGTISTSLSMIL 232 (365)
Q Consensus 169 ------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~----~~~~~~~~~~~~~~g~l 232 (365)
..+ -+.++.....++..-.+++....+...+++..|..+.... + .. .+.....++|..+...+
T Consensus 293 ~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~-~~~~~~vA~~~~iia~~~~vPGyw~tv~~ 371 (538)
T KOG0252|consen 293 LFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANT-YHELFKVAEGNLIIAVCSTVPGYWFTVYF 371 (538)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcch-HHHHHHHHHHHHHHHHHccCCceeEEEEE
Confidence 001 0223333333444345677778888888888887666554 3 11 12222223345555678
Q ss_pred HhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhH
Q 017823 233 ADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISA 312 (365)
Q Consensus 233 ~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~ 312 (365)
+|++|||+..+.++.++.+..+.++..... . .......++..+..++.+++.+.....+++|.+|++.|++
T Consensus 372 id~iGRk~iq~~GF~~~~i~~~~~~~~y~~--------~-~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t 442 (538)
T KOG0252|consen 372 IDIIGRKYIQLMGFFIMTIFFFVIAGPYNQ--------L-ENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRST 442 (538)
T ss_pred eehhhhHHHHHhhHHHHHHHHHHHcCCccc--------c-cccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhh
Confidence 999999999999999999888887775311 1 1233445555566677788888888999999999999999
Q ss_pred HHHHHHHH---------------------------HHH------HHHHHHHHhhcccCCCCChHHHHHHHcc
Q 017823 313 GQIITVAA---------------------------GVF------FFLTTFMHFFLPETKNVPIELMDKCWRE 351 (365)
Q Consensus 313 ~~~~~~~~---------------------------~~f------~~~~~~~~~~~~et~~~~~~~~~~~~~~ 351 (365)
+.|+..+. .++ .+.+.+..+++||||+++++|++++.+.
T Consensus 443 ~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~~~leei~~e~~~ 514 (538)
T KOG0252|consen 443 CHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLIPETKGKSLEEISNEEES 514 (538)
T ss_pred hhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEeecccccCHHHhcChhhc
Confidence 99999988 122 2255666778999999999988655443
No 44
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.90 E-value=1.4e-22 Score=194.62 Aligned_cols=273 Identities=12% Similarity=0.027 Sum_probs=195.1
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.+++|.|+++.+++.+++.++..+++++.|+++||+|||+.+..+..+..++.++.+++++++.+++.|++.|++.+...
T Consensus 22 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 101 (379)
T TIGR00881 22 VEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGW 101 (379)
T ss_pred HHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccC
Confidence 35567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHH-HHhhhhccccCCcchHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSAN-LLNYGTQKIKVGWGWRI 166 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~-~~~~~~~~~~~~~gwr~ 166 (365)
+ ....++.|+.|+++|+++.++.+.+..+|..+++ .++..+. +..+||.
T Consensus 102 ~---------------------------~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~ 151 (379)
T TIGR00881 102 P---------------------------PCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIA---ELYSWHW 151 (379)
T ss_pred C---------------------------chHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHH---hcCCchh
Confidence 9 8889999999999999999999999999999999 4555554 2346887
Q ss_pred HH---------------------Hh-------------------------------------HHHHHHHHHHHHHHhccc
Q 017823 167 SL---------------------KY-------------------------------------RLQFVMAILIPFFQHVTR 188 (365)
Q Consensus 167 ~f---------------------~~-------------------------------------~~~~~~~~~~~~~~~~~~ 188 (365)
.+ +. +++.++......+.....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (379)
T TIGR00881 152 VFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVV 231 (379)
T ss_pred HHHHHHHHHHHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 76 00 011122222222222333
Q ss_pred ccchhhcHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCC
Q 017823 189 INVISFYAPVLF-RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDH 267 (365)
Q Consensus 189 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 267 (365)
......+.|.++ +..|+++.+.. .......+..+++.++.+++.||..+|+.....................
T Consensus 232 ~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------ 304 (379)
T TIGR00881 232 RTGILDWSPLYLTQEKGFSKEKAS-WAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWL------ 304 (379)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc------
Confidence 445566778777 45799988888 8888899999999999999999864433222222211111111111110
Q ss_pred CCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 268 GGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.+..............+... .+..+....+..|.+|++.|+++.|+.+..
T Consensus 305 --~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 354 (379)
T TIGR00881 305 --NPAANPLMDLICLFALGFLV-YGPQMLIGVIASELAPKKAAGTAAGFVGFF 354 (379)
T ss_pred --CcchhHHHHHHHHHHHHHHH-hhhhHHHHHHHHHhcCcchhHHHHHHHHHh
Confidence 01111222223333333322 223333345668999999999999999877
No 45
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.90 E-value=4.5e-22 Score=192.05 Aligned_cols=269 Identities=22% Similarity=0.311 Sum_probs=192.0
Q ss_pred CCchHHHHHHHH-----HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHH--------HHHHHHHHh
Q 017823 13 FDSQLLTTFTSS-----LYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIY--------MLIFGRVLL 79 (365)
Q Consensus 13 ~~~~~~~~~~s~-----~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~--------~~~~~r~l~ 79 (365)
.++++.+...+. .+++..+++++.|+++||+|||+++..+..+..++.++.+++++++ .++++|+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 106 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ 106 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence 345555554443 3444567899999999999999999999999999999999998875 588899999
Q ss_pred hcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccc-
Q 017823 80 GVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKI- 158 (365)
Q Consensus 80 G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~- 158 (365)
|++.+...+ ....++.|+.|+++|++..+..+.+..+|.++++.++..+...
T Consensus 107 G~~~~~~~~---------------------------~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~ 159 (394)
T TIGR00883 107 GFSLGGEWG---------------------------GAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLL 159 (394)
T ss_pred Hhhcccccc---------------------------ccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999 8899999999999999999999999999999999887655321
Q ss_pred ----cCCcchHHHH-----------------------------------------HhHHHHHHHHHHHHHHhcccccchh
Q 017823 159 ----KVGWGWRISL-----------------------------------------KYRLQFVMAILIPFFQHVTRINVIS 193 (365)
Q Consensus 159 ----~~~~gwr~~f-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (365)
.+.++||..+ +++++.........+..........
T Consensus 160 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (394)
T TIGR00883 160 GDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEKHKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLIT 239 (394)
T ss_pred CHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhccccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHH
Confidence 1246899887 0111112222222222233445556
Q ss_pred hcHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHH-HHHHHHHhhhcCCCCCCc
Q 017823 194 FYAPVLF-RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSR-VMIGSIMADQIGDHGGFS 271 (365)
Q Consensus 194 ~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~ 271 (365)
.+.|.+. ++.|.++++.. .......+...++.++.++++||+|||+.+.....+..+.. ....... .
T Consensus 240 ~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~----------~ 308 (394)
T TIGR00883 240 TYLPTYLTQTLGLSANSAL-LVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALL----------D 308 (394)
T ss_pred HHHHHHHHHhcCCChhHHH-HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh----------c
Confidence 6788888 56788888888 78888889999999999999999999998775554443333 2222111 0
Q ss_pred hhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 272 IGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.++.+.......+.+.+.+....+ .....+|.+|++.|+++.++.+..
T Consensus 309 ~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~ 356 (394)
T TIGR00883 309 SGSFTLFFFLVLGLALIGGMYTGP-MGSFLPELFPTEVRYTGASLAYNL 356 (394)
T ss_pred CCchHHHHHHHHHHHHHHHHHhhh-HHHHHHHhCCccceeeEeeehhHh
Confidence 112333334444444544444444 456678999999999988875443
No 46
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.90 E-value=3.5e-22 Score=192.23 Aligned_cols=273 Identities=15% Similarity=0.124 Sum_probs=195.1
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHhhcchhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAF-NIYMLIFGRVLLGVGIGFA 86 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~-~~~~~~~~r~l~G~~~g~~ 86 (365)
.+++|+|+.+.+++.+.+.++..+++++.|+++||+|||+.+..+..+..++.++.++++ +++.+++.|++.|++.+.
T Consensus 29 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~- 107 (366)
T TIGR00886 29 KDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGS- 107 (366)
T ss_pred HHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchh-
Confidence 456777899999999999999999999999999999999999999999999999999999 999999999999998654
Q ss_pred hhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccc-------c
Q 017823 87 NQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKI-------K 159 (365)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~-------~ 159 (365)
.+ ....++.|++|+++|+++.++......+|..+++.++..+... .
T Consensus 108 ~~---------------------------~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~ 160 (366)
T TIGR00886 108 FA---------------------------SCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLP 160 (366)
T ss_pred hH---------------------------hHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccc
Confidence 45 5667889999999999999999877777776666665444321 0
Q ss_pred CCcchHHHH------------------------------HhH----------------H-----HHHHHHHHHHHHhccc
Q 017823 160 VGWGWRISL------------------------------KYR----------------L-----QFVMAILIPFFQHVTR 188 (365)
Q Consensus 160 ~~~gwr~~f------------------------------~~~----------------~-----~~~~~~~~~~~~~~~~ 188 (365)
...+||+.+ +.+ + +..+......+.....
T Consensus 161 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (366)
T TIGR00886 161 AHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGS 240 (366)
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhHHHHHHHHHHH
Confidence 123566554 000 0 1112222222222333
Q ss_pred ccchhhcHHHHHH-HcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCC
Q 017823 189 INVISFYAPVLFR-TIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDH 267 (365)
Q Consensus 189 ~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 267 (365)
......+.|.+++ ..|.++.+.+ ....+..+..++++++.++++||+|||+.+..+......+...+....
T Consensus 241 ~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~------- 312 (366)
T TIGR00886 241 FLGVSSIFAMFFKDQFGLSKVTAG-AYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGL------- 312 (366)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcC-------
Confidence 4455567777774 5688988888 788888899999999999999999999888777666655555544331
Q ss_pred CCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 268 GGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.++...+.............+.+.+. .+...+|..| +++|++.|+.++.
T Consensus 313 --~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~ 361 (366)
T TIGR00886 313 --VSPLSLAVFIVLFVALFFFSGAGNGS-TFALVPHIFR-RATGAVSGLVGAI 361 (366)
T ss_pred --CCcchHHHHHHHHHHHHHHhccccch-hhhcchhhch-hhcccHHHHHHHh
Confidence 01002333333333444444444443 3556678887 5899999987764
No 47
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.89 E-value=7.8e-22 Score=192.43 Aligned_cols=219 Identities=17% Similarity=0.180 Sum_probs=176.5
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
+++|.|.++.++..+.+.++..+++++.|+++||+|||+.+..+..+..++.++..++++++.++++|++.|++.+...+
T Consensus 31 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 110 (392)
T PRK10473 31 ADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYV 110 (392)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHH
Confidence 45677799999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
....++.|.+|+++|+++.+..+....+|..+++.++..+. +..+||..+
T Consensus 111 ---------------------------~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~---~~~g~~~~~ 160 (392)
T PRK10473 111 ---------------------------VAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIM---LKFPWQSLF 160 (392)
T ss_pred ---------------------------HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCcChHHHH
Confidence 78888999999999999999999999999999999988776 335688876
Q ss_pred --------------------------------------HhHHH-HHHHHHHHHHHhcccccchhhcHHHHH-HHcCCCcc
Q 017823 169 --------------------------------------KYRLQ-FVMAILIPFFQHVTRINVISFYAPVLF-RTIKLSES 208 (365)
Q Consensus 169 --------------------------------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~ 208 (365)
..+++ ........... .........+.|.++ ++.|+++.
T Consensus 161 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~ 239 (392)
T PRK10473 161 YTMAAMGILVLLLSLFILKETRPARAPAASSKPRENSESLLNRFFLSRLVITTLS-VTVILTFVNTSPVLLMEQMGFSRG 239 (392)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCcccCCccchHHHHHHHHhCHHHHHHHHHHHHH-HHHHHHHHHhCHHHHHHHcCCCHH
Confidence 00111 12112211111 112223334456555 56789888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHH
Q 017823 209 TSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSI 259 (365)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~ 259 (365)
+.+ ......++..+++.++.+++.||+|||+.+..+..+..++.+.+...
T Consensus 240 ~~~-~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 240 EYA-IIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALS 289 (392)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 887 78888899999999999999999999999988888777776666554
No 48
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.89 E-value=2.4e-21 Score=191.66 Aligned_cols=273 Identities=14% Similarity=0.054 Sum_probs=189.6
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHhhcchh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA-----FNIYMLIFGRVLLGVGIG 84 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a-----~~~~~~~~~r~l~G~~~g 84 (365)
++++|++|.+++.+++.+++.++.++.|.+.||+|+|+++..+..+.++.++..+++ +|++.+++.|++.|++ |
T Consensus 64 ~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g 142 (462)
T PRK15034 64 GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-G 142 (462)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-H
Confidence 577889999999999999999999999999999999999999999999999999987 8999999999999998 6
Q ss_pred hhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhc-----c--
Q 017823 85 FANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQ-----K-- 157 (365)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~-----~-- 157 (365)
..++ .....+++++|+++||++.++.....++|..+++++...+. .
T Consensus 143 ~~f~---------------------------~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~ 195 (462)
T PRK15034 143 ANFA---------------------------SSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFL 195 (462)
T ss_pred HhHH---------------------------HHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 6777 78888999999999999999997666666655544443221 0
Q ss_pred --------ccCCcchHHHH---------------------------------HhHHHHHHHHHHHHHHhcccccchhhcH
Q 017823 158 --------IKVGWGWRISL---------------------------------KYRLQFVMAILIPFFQHVTRINVISFYA 196 (365)
Q Consensus 158 --------~~~~~gwr~~f---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (365)
..+..+||... ..|++..+.+....+..+..+....++.
T Consensus 196 G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~l 275 (462)
T PRK15034 196 GVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGF 275 (462)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 00123455544 0111112222233333455666677788
Q ss_pred HHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHH
Q 017823 197 PVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAY 276 (365)
Q Consensus 197 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (365)
|.+.++ .++..... ....+..+...+.++++|+++||+|+|+++..+++.+.++......... ..+..+.+
T Consensus 276 p~~~~~-~~~~~~~l-~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp-------~~~~~~~~ 346 (462)
T PRK15034 276 AMLAKT-QFPDVNIL-RLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLP-------GTGSGNFI 346 (462)
T ss_pred HHHHHH-HcChHHHH-HHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-------cccccHHH
Confidence 888855 34433333 3455567888999999999999999999999988877777655444321 11112233
Q ss_pred HHHHHHHHHHHhhccccccccccccccCCCh---------------------hhhhHHHHHHHHH
Q 017823 277 LILVLICVYKAGFAFSWGPLRWLVPSENFPL---------------------EIISAGQIITVAA 320 (365)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~---------------------~~r~~~~~~~~~~ 320 (365)
...+......+..+.+.+.+ +-++++.+|+ ++-|.+.|+..+.
T Consensus 347 ~~~~~~~~l~~~~G~gngsv-fk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~ 410 (462)
T PRK15034 347 AFYAVFMGLFLTAGLGSGST-FQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAI 410 (462)
T ss_pred HHHHHHHHHHHHhcccchHH-HHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHH
Confidence 33333333334445555554 3344566664 1456777777766
No 49
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.89 E-value=2.5e-21 Score=189.85 Aligned_cols=271 Identities=13% Similarity=0.041 Sum_probs=197.9
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
++++.|+.+.++..+.+.++..+++++.|+++||+|||+.+..+..+..++.+...++++++.+++.|++.|++.+...+
T Consensus 41 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~ 120 (406)
T PRK15402 41 EDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGA 120 (406)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHH
Confidence 56677799999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
....++.|.+|+++|.+..+.......+|..+++.++..+.+ ..+||+.+
T Consensus 121 ---------------------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~---~~~w~~~~ 170 (406)
T PRK15402 121 ---------------------------VGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH---VLPWRGMF 170 (406)
T ss_pred ---------------------------HHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccCccHHH
Confidence 777788999999999999999888888899999999887763 34688877
Q ss_pred ---------------------------H-------------hHHHHHHHHHHHHHHhcccccchhhcHHHHH-HHcCCCc
Q 017823 169 ---------------------------K-------------YRLQFVMAILIPFFQHVTRINVISFYAPVLF-RTIKLSE 207 (365)
Q Consensus 169 ---------------------------~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~ 207 (365)
+ .+++.++..................+.|.++ ++.|.++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~ 250 (406)
T PRK15402 171 VLFAALAALSFFGLWRAMPETAGRVGEKLSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSS 250 (406)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCccccccccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCH
Confidence 0 0011122222222111112223334567666 5578888
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHH
Q 017823 208 STSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKA 287 (365)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (365)
.+.+ .......++.+++.++.++++||+++|+.+..+.+...++...+...... .....+...+...+.+.
T Consensus 251 ~~~g-~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~g~ 321 (406)
T PRK15402 251 YEYG-LLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVI--------SSHAYLWLTAGLSLYAF 321 (406)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHc--------ccccHHHHHHHHHHHHH
Confidence 8777 66666777888999999999999999999888877777766666554210 11123333444455555
Q ss_pred hhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 288 GFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 288 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+.+....+. .... ...++++|++..+..+..
T Consensus 322 g~~~~~~~~-~~~~-~~~~~~~~g~~~~~~~~~ 352 (406)
T PRK15402 322 GIGLANAGL-YRLT-LFSSDVSKGTVSAAMGML 352 (406)
T ss_pred HHHHHhhhH-HHHH-hhhccccccHHHHHHHHH
Confidence 554433333 2222 233457889888887776
No 50
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.89 E-value=4e-23 Score=198.52 Aligned_cols=275 Identities=16% Similarity=0.192 Sum_probs=203.4
Q ss_pred cCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhh
Q 017823 7 ISNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFA 86 (365)
Q Consensus 7 ~~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~ 86 (365)
++++++.++++.|++.+.+.+.+.+.+|++|+++|||.||+++.+|.+++.++.+.+++++.||++.++|.+.|+|++..
T Consensus 59 v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~ 138 (493)
T KOG1330|consen 59 VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASY 138 (493)
T ss_pred HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhh
Confidence 45677788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHH
Q 017823 87 NQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRI 166 (365)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~ 166 (365)
.+ .++++++|.+|.++|+++.++++.+..+|..+|.+.+..+.+.... ||+
T Consensus 139 ~~---------------------------ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~--Wr~ 189 (493)
T KOG1330|consen 139 SP---------------------------IAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFW--WRW 189 (493)
T ss_pred cc---------------------------cchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccc--eEE
Confidence 99 9999999999999999999999999999999999999988876542 898
Q ss_pred HH-------------------------------------------HhHH-----HHHHHHHHHHHHhcccccchhhcHHH
Q 017823 167 SL-------------------------------------------KYRL-----QFVMAILIPFFQHVTRINVISFYAPV 198 (365)
Q Consensus 167 ~f-------------------------------------------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (365)
.| +.-+ +..................+.+|.|.
T Consensus 190 af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~ 269 (493)
T KOG1330|consen 190 AFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPA 269 (493)
T ss_pred EEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhh
Confidence 88 0000 11111111222112233455556666
Q ss_pred HH----HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcc-------hH-HHHhHHHHHHHHHHHHHHHhhhcCC
Q 017823 199 LF----RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRK-------VL-FLVGGIQMLVSRVMIGSIMADQIGD 266 (365)
Q Consensus 199 ~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr-------~~-l~~~~~~~~i~~~~~~~~~~~~~~~ 266 (365)
+. +-.|++.++.. ....+...++.+|.+.+|.++||+.|+ +. -..+......+...+....
T Consensus 270 ~~~~~~~~~~~~~~~~~-ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~------ 342 (493)
T KOG1330|consen 270 FIYYSYELIGFDHNATL-IFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFP------ 342 (493)
T ss_pred HHHHHHHHhCCccccch-hhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHH------
Confidence 55 33566777777 888999999999999999999995331 11 1222222222222222221
Q ss_pred CCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 267 HGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.......+..++++.+........+++..... .|++|++.|.++.++...+
T Consensus 343 --~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~-l~vV~p~~Rt~a~a~~~~~ 393 (493)
T KOG1330|consen 343 --AFTSSSMIFGLILFLVGETISWFNWATNNPIF-LEVVPPSRRTTAYALDTVF 393 (493)
T ss_pred --hhhhHHHHHHHHHHHHHHHHHhccccccccee-eEecCcccccHHHHHHHHH
Confidence 11223344444444444444445666665555 7999999999999999877
No 51
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.89 E-value=2.6e-21 Score=186.27 Aligned_cols=267 Identities=15% Similarity=0.115 Sum_probs=195.5
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.+++|+|.++.+++.+.+.++..+++++.|++.||+|||+.+..+..+..++.+.. .+++++.+++.|++.|++.+...
T Consensus 27 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~ 105 (355)
T TIGR00896 27 RSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIIN 105 (355)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHh
Confidence 45677889999999999999999999999999999999999999998888888877 77899999999999999999888
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+ ..+.++.|+.| ++|+++.+..+.+..+|..+++.++..+.+... .+||..
T Consensus 106 ~---------------------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~-~~w~~~ 156 (355)
T TIGR00896 106 V---------------------------LLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSG-GHWQQA 156 (355)
T ss_pred c---------------------------cchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhHHHH
Confidence 7 77777788885 689999999999999999999988877763321 248877
Q ss_pred H---------------H--------------------hHHHHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhH
Q 017823 168 L---------------K--------------------YRLQFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLL 212 (365)
Q Consensus 168 f---------------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 212 (365)
+ + .+++..+......+...........|.|.++++.|.++.+.+
T Consensus 157 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g- 235 (355)
T TIGR00896 157 LAWWALPALLALLAWIPQVRRRVAANQTTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAG- 235 (355)
T ss_pred HHHHHHHHHHHHHHHhhhhccccCCCCCCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-
Confidence 6 0 011222222222222233445556688999988899998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-CcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhcc
Q 017823 213 MSAIVTGSLGTISTSLSMILADRL-GRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAF 291 (365)
Q Consensus 213 ~~~~~~~~~~~~~~~~~g~l~dr~-grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (365)
.......++.++++++.+++.||+ +||+.+..+..+..++.+.+.+.. ..... ....+++++.+.
T Consensus 236 ~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~---~~~~l~g~~~g~ 301 (355)
T TIGR00896 236 SLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP-----------MHGLW---AWALVLGLGQGG 301 (355)
T ss_pred HHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh-----------hhHHH---HHHHHHHHhhhh
Confidence 888899999999999999999999 456666677666666665555431 11111 123344444433
Q ss_pred ccccccccccc-cCCChhhhhHHHHHHHHH
Q 017823 292 SWGPLRWLVPS-ENFPLEIISAGQIITVAA 320 (365)
Q Consensus 292 ~~~~~~~~~~~-e~~p~~~r~~~~~~~~~~ 320 (365)
..+ ....... +..+++.+++..++.+..
T Consensus 302 ~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~ 330 (355)
T TIGR00896 302 AFP-LALTLIGLRSRQAAQAAALSAMAQSI 330 (355)
T ss_pred HhH-HHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 332 2223333 444567778888877665
No 52
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.89 E-value=1.1e-21 Score=195.78 Aligned_cols=200 Identities=18% Similarity=0.135 Sum_probs=167.3
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHhhcchhhhh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA--FNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a--~~~~~~~~~r~l~G~~~g~~~ 87 (365)
++++|..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++..++ .+++.+++.|+++|++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 688999999999999999999999999999999999999999999999998887654 568889999999999999999
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+ ....++.|++|+++|++++++...+..+|..+++++...+.+.. .+||..
T Consensus 150 ~---------------------------~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~--~gw~~~ 200 (465)
T TIGR00894 150 P---------------------------ATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW--GGWPMI 200 (465)
T ss_pred h---------------------------hHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCCee
Confidence 9 89999999999999999999999999999999999988877321 268877
Q ss_pred H---------------------H---------h-------------------------HHHHHHHHHHHHHHhcccccch
Q 017823 168 L---------------------K---------Y-------------------------RLQFVMAILIPFFQHVTRINVI 192 (365)
Q Consensus 168 f---------------------~---------~-------------------------~~~~~~~~~~~~~~~~~~~~~~ 192 (365)
| + . +++..+......+......+..
T Consensus 201 f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (465)
T TIGR00894 201 FYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTIL 280 (465)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 7 0 0 0012233334344444455666
Q ss_pred hhcHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcc
Q 017823 193 SFYAPVLF-RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRK 239 (365)
Q Consensus 193 ~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr 239 (365)
..|.|.++ +..|++..+.+ ....+..++..++.+++|+++||+++|
T Consensus 281 ~~~lp~~l~~~~g~s~~~~g-~~~~~~~~~~~i~~~~~g~l~d~~~~~ 327 (465)
T TIGR00894 281 PTYLPTFISWVLRVSGKENG-LLSSLPYLFAWLCSIFAGYLADFLKSS 327 (465)
T ss_pred HHHHHHHHHHHhCcChHHhH-HHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 77889888 45799998888 888888999999999999999998654
No 53
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.89 E-value=2.7e-21 Score=192.67 Aligned_cols=266 Identities=14% Similarity=-0.003 Sum_probs=182.5
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh----hHHHHHHHHHHhhcchhhhh
Q 017823 12 KFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAF----NIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 12 ~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~----~~~~~~~~r~l~G~~~g~~~ 87 (365)
++|+++.+++.+.+.++..+++++.|+++||+|||+++..+..+.+++.+..++++ +++.+++.|++.|++.+...
T Consensus 59 g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~ 138 (452)
T PRK11273 59 GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGW 138 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccc
Confidence 78899999999999999999999999999999999999999999999999888763 78889999999999999887
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHH-HHHHHhhhhccccCCcchHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVL-SANLLNYGTQKIKVGWGWRI 166 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~-i~~~~~~~~~~~~~~~gwr~ 166 (365)
+ .....+.|++|+++|++++++.+.+..+|.. .+++.+..... ..+||+
T Consensus 139 ~---------------------------~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~---~~gw~~ 188 (452)
T PRK11273 139 P---------------------------PCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW---FNDWHA 188 (452)
T ss_pred h---------------------------HHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH---hccHHH
Confidence 7 6677788999999999999999999988864 45544333321 126887
Q ss_pred HH------------------H---h-------------------------------------HHHHHHHHHHHHHHhccc
Q 017823 167 SL------------------K---Y-------------------------------------RLQFVMAILIPFFQHVTR 188 (365)
Q Consensus 167 ~f------------------~---~-------------------------------------~~~~~~~~~~~~~~~~~~ 188 (365)
.| + . +++.++...+..+.....
T Consensus 189 ~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 268 (452)
T PRK11273 189 ALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLL 268 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHH
Confidence 77 0 0 001122222222222233
Q ss_pred ccchhhcHHHHHHH-cCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhh--CcchHHH-HhHHHHHHHHHHHHHHHhhhc
Q 017823 189 INVISFYAPVLFRT-IKLSESTSLLMSAIVTGSLGTISTSLSMILADRL--GRKVLFL-VGGIQMLVSRVMIGSIMADQI 264 (365)
Q Consensus 189 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--grr~~l~-~~~~~~~i~~~~~~~~~~~~~ 264 (365)
.+....|.|.++++ .|++..+.. ....+..++.+++.++.|+++||+ +||+... ....+..++.+.+...
T Consensus 269 ~~~~~~~~P~~l~~~~g~s~~~~~-~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~----- 342 (452)
T PRK11273 269 RYGILDWSPTYLKEVKHFALDKSS-WAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLN----- 342 (452)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHh-----
Confidence 45566788999965 688888887 777788899999999999999999 4454322 2222222222222111
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 265 GDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.....+...+.....+.... +..+....+..|.+|++.||++.|+.+..
T Consensus 343 ------~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 391 (452)
T PRK11273 343 ------PAGNPTVDMACMIVIGFLIY-GPVMLIGLHALELAPKKAAGTAAGFTGLF 391 (452)
T ss_pred ------cccChHHHHHHHHHHHHHHH-hHHHHHHHHHHHHcChhhhhhHHHHHHHH
Confidence 00112222222222222211 11122234457999999999999988765
No 54
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.89 E-value=5.4e-21 Score=186.09 Aligned_cols=263 Identities=16% Similarity=0.136 Sum_probs=192.7
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQV 89 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~ 89 (365)
++|.|.++.|++.+.+.++..+++++.|+++||+|||+.+..+..+.+++.+..++++|++.++++|++.|++.+...+
T Consensus 35 ~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~- 113 (381)
T PRK03633 35 QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWV- 113 (381)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH-
Confidence 4567799999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred hhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcccc-CCcchHHHH
Q 017823 90 SVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIK-VGWGWRISL 168 (365)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~-~~~gwr~~f 168 (365)
.....+.+..|+++|+++.+..+.+..+|..+|+.++..+.+.. ....|+...
T Consensus 114 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~ 167 (381)
T PRK03633 114 --------------------------VVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTGL 167 (381)
T ss_pred --------------------------HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHH
Confidence 66666778888999999999999999999999999988776421 123455433
Q ss_pred ---------H-------------------hHHHHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHH
Q 017823 169 ---------K-------------------YRLQFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGS 220 (365)
Q Consensus 169 ---------~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 220 (365)
. .+++.........+...........+.|.++++.|.+++..+ .......+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g-~~~~~~~~ 246 (381)
T PRK03633 168 VLAAILPLLFTRILNQQAENHDSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIG-FWMALLVS 246 (381)
T ss_pred HHHHHHHHHHhcccCCCCCCCCCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHH
Confidence 0 001111111111222122233445578988888899888887 77788889
Q ss_pred HHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccc
Q 017823 221 LGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLV 300 (365)
Q Consensus 221 ~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (365)
..+++++..+++.||+++|+.+..+.....++...+... ... .....+.+.+.. ...|.....
T Consensus 247 ~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~-------------~~~---~~~~~l~g~~~~-~~~p~~~~~ 309 (381)
T PRK03633 247 AGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAMLSQ-------------AAM---APALFILGAAGF-TLYPVAMAW 309 (381)
T ss_pred HHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHhhh-------------HHH---HHHHHHHHHHHH-hHHHHHHHH
Confidence 999999999999999999998887776666655433210 111 112222222222 233444555
Q ss_pred cccCCChhhhhHHHHHH
Q 017823 301 PSENFPLEIISAGQIIT 317 (365)
Q Consensus 301 ~~e~~p~~~r~~~~~~~ 317 (365)
..|..|+++++...+..
T Consensus 310 ~~~~~~~~~~~~~~~~~ 326 (381)
T PRK03633 310 ACEKVEHHELVAMNQAL 326 (381)
T ss_pred HHccCCHHHHHHHHHHH
Confidence 67888887776655553
No 55
>PRK11043 putative transporter; Provisional
Probab=99.89 E-value=3.8e-21 Score=188.18 Aligned_cols=272 Identities=15% Similarity=0.082 Sum_probs=197.0
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.++++.|+++.++..+++.++..+++++.|+++||+|||+.+..+..+..++.++..++++++.+++.|++.|++.+...
T Consensus 33 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~ 112 (401)
T PRK11043 33 QADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAA 112 (401)
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHH
Confidence 34567779999999999999999999999999999999999999999999999999999999999999999999988877
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+ ....++.|++|++++++..+.......+|..+++.++..+. +..+||..
T Consensus 113 ~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~---~~~g~~~~ 162 (401)
T PRK11043 113 V---------------------------IWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLL---NHFGWQAI 162 (401)
T ss_pred H---------------------------HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCChHHH
Confidence 7 66777899999999999988888888999999999988887 34579987
Q ss_pred H------------------------H---h--------HHHHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhH
Q 017823 168 L------------------------K---Y--------RLQFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLL 212 (365)
Q Consensus 168 f------------------------~---~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 212 (365)
+ + . +++.....................+.|.++++.|+++.+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g- 241 (401)
T PRK11043 163 FATLFAITLLLILPTLRLKPSKKARKQSQDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIG- 241 (401)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCccccchHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHH-
Confidence 7 0 0 01111111111111122233445567888888899988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccc
Q 017823 213 MSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFS 292 (365)
Q Consensus 213 ~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (365)
.......++.++++++.+++.||+++|+..........++...+...... ..+..+.......+.+.+.+..
T Consensus 242 ~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 313 (401)
T PRK11043 242 LSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLL--------SHPSLVPLLIPFCVMAAANGAI 313 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHh--------ccCcHHHHHHHHHHHHHHHHHH
Confidence 67777788889999999999999999987766555555444433322110 0111222333333444444433
Q ss_pred cccccccccccCCChhhhhHHHHHHHHH
Q 017823 293 WGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 293 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
. |.......|..| +.|+++.|+.+..
T Consensus 314 ~-~~~~~~~~~~~~-~~~g~~~g~~~~~ 339 (401)
T PRK11043 314 Y-PIVVAQALRPFP-QATGKAAALQNTL 339 (401)
T ss_pred H-HHHHHHHhhhCc-ccChHHHHHHHHH
Confidence 3 333334456666 4789999998877
No 56
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.89 E-value=3.3e-21 Score=185.92 Aligned_cols=267 Identities=14% Similarity=0.126 Sum_probs=186.1
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHH-HHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILV-RSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFA 86 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~-~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~ 86 (365)
.+++|.|+.+.|++.+.+.+...+.+++.|+++||+||||.++. +..+..++.++.++++|++.+++.|++.|.+.+..
T Consensus 25 ~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ 104 (375)
T TIGR00899 25 SEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTA 104 (375)
T ss_pred HcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhh
Confidence 45677779999999999999999999999999999999887654 56666777788889999999999999998887777
Q ss_pred hhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchh--hhHHHHHHHHHHHHHHHHhhhhccccCCcch
Q 017823 87 NQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAF--NIGFQVCVATAVLSANLLNYGTQKIKVGWGW 164 (365)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~--~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gw 164 (365)
.+ ....+..|+.|+++|++. .+..+.+.++|..+++.++..+. +..+|
T Consensus 105 ~p---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~---~~~~~ 154 (375)
T TIGR00899 105 NP---------------------------QLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLA---LGFGF 154 (375)
T ss_pred HH---------------------------HHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHH---Hhccc
Confidence 77 667777888887777654 57778888999999999988887 34579
Q ss_pred HHHH------------------H------------------hHHHHHHHHHHHHHHhcccccchhhcHHHHH-HHcCCCc
Q 017823 165 RISL------------------K------------------YRLQFVMAILIPFFQHVTRINVISFYAPVLF-RTIKLSE 207 (365)
Q Consensus 165 r~~f------------------~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~ 207 (365)
|+.| + .+++.........+...........+.|.++ ++.|.++
T Consensus 155 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 234 (375)
T TIGR00899 155 TVMFLTAALAFVLCGVLVWLFLPSYPRGAPGALTRLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPD 234 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccCcccccCcchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCH
Confidence 9888 0 0011111111111111222233344566666 5678888
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHH
Q 017823 208 STSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKA 287 (365)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (365)
.+.+ ...........++.++.+++.||+|||+.+..+.....+........ ++.+.......+.++
T Consensus 235 ~~~g-~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~g~ 300 (375)
T TIGR00899 235 KLAG-LMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAAD-------------NSLWALLMLQLLNAI 300 (375)
T ss_pred HHHH-HHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHH
Confidence 8887 66666667778889999999999999998877665544443333222 123333333344444
Q ss_pred hhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 288 GFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 288 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+.+.. .+....+..|..|++ ++++.++.+..
T Consensus 301 ~~g~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~ 331 (375)
T TIGR00899 301 FIGIL-AGIGMLYFQDLMPGR-AGAATTLYTNT 331 (375)
T ss_pred HHHHH-HHHHHHHHHHhCcch-hhHHHHHHHHH
Confidence 44333 334445667888765 56888887766
No 57
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.89 E-value=2.1e-21 Score=191.37 Aligned_cols=204 Identities=11% Similarity=0.082 Sum_probs=160.7
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.++++.|.++.++..+++.+++.+++++.|+++||+|||+++..+.+++.++++++++++|++.++++|+++|++.+...
T Consensus 43 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~ 122 (413)
T PRK15403 43 VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIA 122 (413)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Confidence 45677889999999999999999999999999999999999999999999999999999999999999999999988766
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+ ....++.|++|+++|++.+++......+|..+|+.++..+. +..|||+.
T Consensus 123 ~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~---~~~gw~~~ 172 (413)
T PRK15403 123 T---------------------------VGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALM---HFVHWKVL 172 (413)
T ss_pred H---------------------------HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCHHHH
Confidence 6 56677889999999999999999999999999999998877 34579998
Q ss_pred H----------------------H------------------hHHHHHHHHHHHHHHhcccccchhhcHHHHHHH-cCCC
Q 017823 168 L----------------------K------------------YRLQFVMAILIPFFQHVTRINVISFYAPVLFRT-IKLS 206 (365)
Q Consensus 168 f----------------------~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~ 206 (365)
| + .+++.++..................+.|.++++ .|.+
T Consensus 173 f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s 252 (413)
T PRK15403 173 FAIIAVMGLIAFVGLLLAMPETVKRGAVPFSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMT 252 (413)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCccccCCCCChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCC
Confidence 8 0 011122222222232233344455567878755 5899
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHH
Q 017823 207 ESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLF 242 (365)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l 242 (365)
+.+.+ ........+..+++.+.+.+.+|..+++..
T Consensus 253 ~~~~g-l~~~~~~~~~~i~~~l~~~~~~~~~~~~~~ 287 (413)
T PRK15403 253 TSQFA-WTQVPVFGAVIVANAIVARFVKDPTEPRFI 287 (413)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHhccCCchhHH
Confidence 88888 666667777788777777766554444443
No 58
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.89 E-value=6e-21 Score=187.24 Aligned_cols=270 Identities=13% Similarity=0.050 Sum_probs=190.2
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH---H-hhhHHHHHHHHHHhhcchh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRG---A-AFNIYMLIFGRVLLGVGIG 84 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~---~-a~~~~~~~~~r~l~G~~~g 84 (365)
+++|.|+++.+++.+.+.++..+++++.|++.||+|||+.+..+..+.+++.++.. + .++++.+++.|++.|++.+
T Consensus 41 ~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~ 120 (402)
T TIGR00897 41 KALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYP 120 (402)
T ss_pred HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchH
Confidence 35677899999999999999999999999999999999999999999988876553 3 2578889999999999988
Q ss_pred hhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHH-HHHHHHhhhhccccCCcc
Q 017823 85 FANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAV-LSANLLNYGTQKIKVGWG 163 (365)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~-~i~~~~~~~~~~~~~~~g 163 (365)
...+ .....+.|+.|+|+|++++++.+.+.++|. .+++.++..+.+ ..|
T Consensus 121 ~~~~---------------------------~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~---~~g 170 (402)
T TIGR00897 121 LFAY---------------------------SFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIP---AFG 170 (402)
T ss_pred HHHh---------------------------HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---ccc
Confidence 8777 667778899999999999999999999996 578888766552 234
Q ss_pred -----hHHHH-------------Hh------------------------HHHHHHHHHHHHHHhcccccchhhcHHHHHH
Q 017823 164 -----WRISL-------------KY------------------------RLQFVMAILIPFFQHVTRINVISFYAPVLFR 201 (365)
Q Consensus 164 -----wr~~f-------------~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (365)
|+..+ +. +++..+......+...........|.|.+.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 250 (402)
T TIGR00897 171 EMNTLWSALAFVLTGGVIALFSNKDIFTPQHMQTREKFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVA 250 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccCCCCCcccccCCcchhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44443 00 0111222222222223345566678899998
Q ss_pred HcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHH-HhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHH
Q 017823 202 TIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFL-VGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILV 280 (365)
Q Consensus 202 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (365)
+.|+++.+.. .......++..++++..|+++||++||+.+. .+.+...+....+...... ..+..+...+
T Consensus 251 ~~g~s~~~~~-~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~--------~~~~~~~~~~ 321 (402)
T TIGR00897 251 ELGFSTSEWL-QIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQH--------FGHSFAVALI 321 (402)
T ss_pred HcCCChhHHH-HHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHc--------cCCcHHHHHH
Confidence 8999998887 7778888999999999999999999988764 2333333333333222100 0112233333
Q ss_pred HHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 281 LICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
...+.+.+.+. ..+... ...|..| ++|+++.|+.+..
T Consensus 322 ~~~~~G~~~~~-~~~~~~-~~~~~~~-~~~g~~~g~~~~~ 358 (402)
T TIGR00897 322 IAIALGIFLAG-YVPLAA-VFPTLAP-KHKGAAMSVLNLS 358 (402)
T ss_pred HHHHHHHHHHH-HHHHHH-HHHhhCc-chhHHHHHHHHHH
Confidence 44444444432 334433 3467655 5899999998877
No 59
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.88 E-value=1.3e-21 Score=195.22 Aligned_cols=266 Identities=12% Similarity=0.053 Sum_probs=193.4
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHH-HHHHhhcchhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIF-GRVLLGVGIGFAN 87 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~-~r~l~G~~~g~~~ 87 (365)
+++|.|.++.+++.+.+.++..++.++.|+++||+|||+.++.+.++..+++++++++++++.+++ .|++.|++.+...
T Consensus 47 ~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~ 126 (455)
T TIGR00892 47 QIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNF 126 (455)
T ss_pred HHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhh
Confidence 567777999999999999999999999999999999999999999999999999999999998875 5789999998776
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+ ....++.|++| ++|+++.++.+.+..+|..++++++..+. +.+|||+.
T Consensus 127 ~---------------------------~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~---~~~gwr~~ 175 (455)
T TIGR00892 127 Q---------------------------PSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLF---ESFGWRGS 175 (455)
T ss_pred h---------------------------HHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHH---HHhChHHH
Confidence 6 56667788885 78999999999999999999999988776 34579988
Q ss_pred H------------------H--hH----------------------------------------HHHHHHHHHHHHHhcc
Q 017823 168 L------------------K--YR----------------------------------------LQFVMAILIPFFQHVT 187 (365)
Q Consensus 168 f------------------~--~~----------------------------------------~~~~~~~~~~~~~~~~ 187 (365)
| + .. ++.+.......+....
T Consensus 176 f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 255 (455)
T TIGR00892 176 FLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFL 255 (455)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHH
Confidence 8 0 00 0001111111222222
Q ss_pred cccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhh--CcchHHHHhH--HHHHHHHHHHHHHHhhh
Q 017823 188 RINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRL--GRKVLFLVGG--IQMLVSRVMIGSIMADQ 263 (365)
Q Consensus 188 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--grr~~l~~~~--~~~~i~~~~~~~~~~~~ 263 (365)
.......+.|.+.++.|+++.+.+ ....+.+++.++++++.++++||. ++|+...... ....++.+.....
T Consensus 256 ~~~~~~~~l~~~~~~~g~s~~~~g-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~---- 330 (455)
T TIGR00892 256 GFFAPIIFLVPYAKDKGVDEYEAA-FLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALA---- 330 (455)
T ss_pred HccchHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 334445677888888899998888 888889999999999999999974 3343333322 2222222222211
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 264 IGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
++.+..++...+.+++.+... +....+..|.+|+++++++.|+.+..
T Consensus 331 ---------~~~~~~~i~~~~~G~~~g~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~ 377 (455)
T TIGR00892 331 ---------GDYTGLVIYCIFFGLSFGSVG-ALLFEVLMDLVGAQRFSSAVGLVTIV 377 (455)
T ss_pred ---------chHHHHHHHHHHHHHHhchHH-HHHHHHHHHHhhHHHHhhHHhHHHHH
Confidence 123344444555555554333 34455668999999999999998877
No 60
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.88 E-value=1.2e-20 Score=191.31 Aligned_cols=289 Identities=19% Similarity=0.159 Sum_probs=208.6
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
+....+.....+..+++++|..+|+++.|+++||+|||++++.+.++..++.+.+++++|++.+++.|++.|++.+....
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 34455678889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
....++.|+.++|+|+.+..+ ......+..+++..+.++.. +||+.+
T Consensus 191 ---------------------------~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-----~Wr~~~ 237 (521)
T KOG0255|consen 191 ---------------------------VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-----DWRWLF 237 (521)
T ss_pred ---------------------------HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-----hHHHHH
Confidence 899999999999999999999 55555555555555555542 588887
Q ss_pred --------------------------------------------------------------------------------
Q 017823 169 -------------------------------------------------------------------------------- 168 (365)
Q Consensus 169 -------------------------------------------------------------------------------- 168 (365)
T Consensus 238 ~~~~~~~~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 317 (521)
T KOG0255|consen 238 WIISIPSGLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRT 317 (521)
T ss_pred HHHHHHHHHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcC
Confidence
Q ss_pred -HhHHHHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHH
Q 017823 169 -KYRLQFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGI 247 (365)
Q Consensus 169 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~ 247 (365)
+.+++........+ .....|....+...+++.+.. ......+....++....+...|++|||.....+..
T Consensus 318 ~~l~~~~~~~~~~~~-------~~~~~y~gl~~~~~~lg~~~~--~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~ 388 (521)
T KOG0255|consen 318 PRLRYRTLYLLFIWF-------VFSLVYYGLSLNVSGLGGNIY--LNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLF 388 (521)
T ss_pred HHHHHHHHHHHHHHH-------HHhHHHHhhhhhhhhcCchHH--HHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHH
Confidence 01111111111110 000011111111122222222 34555566888888888999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH-------
Q 017823 248 QMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA------- 320 (365)
Q Consensus 248 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~------- 320 (365)
...++.+..++.... ...+...+...+..++.+.++... +.+.+|++|+..|..+.+..+..
T Consensus 389 ~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ 457 (521)
T KOG0255|consen 389 LAGIGLLLFGWLPDD----------LGGWLHWILPLLGKFFIGSAFNLI-FLYSAELIPTVVRNTAVGAISAAARLGSIL 457 (521)
T ss_pred HHHHHHHHHHHhhcc----------chhHHHHHHHHHHHHHHHHHHHHH-HHHHHhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999887411 111234444444555555566666 78889999999999999999888
Q ss_pred -----------------HHHH----HHHHHHHhhcccCCCCChHHHHHHHc
Q 017823 321 -----------------GVFF----FLTTFMHFFLPETKNVPIELMDKCWR 350 (365)
Q Consensus 321 -----------------~~f~----~~~~~~~~~~~et~~~~~~~~~~~~~ 350 (365)
..+. +.+.+..+++|||+++++.+..++.+
T Consensus 458 ap~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~t~~~~~ 508 (521)
T KOG0255|consen 458 APLFPLLLRQMFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPGTLLDAE 508 (521)
T ss_pred HHHHHHHHhhhcccchHHHHHHHHHHHHHHHHhcCcccCCCCCchhHHHHH
Confidence 1111 13444558899999998866555444
No 61
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.88 E-value=2.1e-21 Score=181.19 Aligned_cols=264 Identities=17% Similarity=0.175 Sum_probs=206.3
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
..++.+..+..+++...+.+..+++-.+|.++|++|||+.+.+......+...+.+.++|+..+.+.|.+.|+|.|+ .|
T Consensus 106 ~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~p 184 (528)
T KOG0253|consen 106 EVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LP 184 (528)
T ss_pred hhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-cc
Confidence 34567788999999999999999999999999999999999999999999999999999999999999999999999 67
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
...++-.|..|..+|...+-.. ..+.+|.+....+..... .+.|||+..
T Consensus 185 ---------------------------v~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm---~~~gwr~~l 233 (528)
T KOG0253|consen 185 ---------------------------VDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVM---SNFGWRYLL 233 (528)
T ss_pred ---------------------------HhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHH---HhhhHHHHH
Confidence 5566668999999999887777 899999999999998887 445788776
Q ss_pred --------------------------------------------------------------------------------
Q 017823 169 -------------------------------------------------------------------------------- 168 (365)
Q Consensus 169 -------------------------------------------------------------------------------- 168 (365)
T Consensus 234 ~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~r 313 (528)
T KOG0253|consen 234 FTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVR 313 (528)
T ss_pred HHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccc
Confidence
Q ss_pred ---------HhHHHHHHHHHHHHHHhcccccchhhcHHHHHHHc--------------------CCCcchhhHHHHHHHH
Q 017823 169 ---------KYRLQFVMAILIPFFQHVTRINVISFYAPVLFRTI--------------------KLSESTSLLMSAIVTG 219 (365)
Q Consensus 169 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------g~~~~~~~~~~~~~~~ 219 (365)
+.|+..+....+++...+. ++......+.+++.. ..+...-. .-..+..
T Consensus 314 g~~~nLlsp~lrkttlllw~iwfgnafs-yyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dY-rdllits 391 (528)
T KOG0253|consen 314 GGTTNLLSPKLRKTTLLLWRIWFGNAFS-YYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDY-RDLLITS 391 (528)
T ss_pred cchHhhcChHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHH-HHHHHHH
Confidence 4566666666665555443 233333333333211 11222223 5677888
Q ss_pred HHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhcccccccccc
Q 017823 220 SLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWL 299 (365)
Q Consensus 220 ~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (365)
+...+|.++.+.+.||+|||+.+..+.+++++..+++.... ......+..+..-++...++.. .+.
T Consensus 392 laefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~-------------~rn~~tvllf~arafisg~fqv-aYv 457 (528)
T KOG0253|consen 392 LAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCK-------------TRNAYTVLLFTARAFISGAFQV-AYV 457 (528)
T ss_pred HhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhc-------------CcchhHHHHHHHHHHHhchheE-EEE
Confidence 99999999999999999999999999999998888877652 1122334444444555555554 489
Q ss_pred ccccCCChhhhhHHHHHHHHH
Q 017823 300 VPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 300 ~~~e~~p~~~r~~~~~~~~~~ 320 (365)
|++|++|+..|+++.|.+..+
T Consensus 458 YtPEVyPTavRatgvGtcSsm 478 (528)
T KOG0253|consen 458 YTPEVYPTAVRATGVGTCSSM 478 (528)
T ss_pred ecCcccchhhhhcchhhhhhH
Confidence 999999999999999999988
No 62
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.87 E-value=8.9e-21 Score=188.18 Aligned_cols=271 Identities=14% Similarity=-0.003 Sum_probs=184.9
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHHhhcchhhh
Q 017823 11 SKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA----FNIYMLIFGRVLLGVGIGFA 86 (365)
Q Consensus 11 ~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a----~~~~~~~~~r~l~G~~~g~~ 86 (365)
.|+|+++.+++.+++.++..+++++.|+++||+|||+.+..+..+.+++.++.++. ++++.+.+.|++.|++.|..
T Consensus 56 ~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~ 135 (438)
T TIGR00712 56 QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMG 135 (438)
T ss_pred cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcc
Confidence 47889999999999999999999999999999999999999999999988887664 46778889999999999988
Q ss_pred hhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHH
Q 017823 87 NQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRI 166 (365)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~ 166 (365)
.+ .....+.|++|+++|++++++.+.+..+|..+++.+...... ...+||.
T Consensus 136 ~~---------------------------~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~--~~~~w~~ 186 (438)
T TIGR00712 136 WP---------------------------PCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMA--WFNDWHA 186 (438)
T ss_pred hH---------------------------HHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHH--HhhhhHH
Confidence 88 777888999999999999999999999999988877654332 1246988
Q ss_pred HH---------------------HhH---------------------------H----------HHHHHHHHHHHHhccc
Q 017823 167 SL---------------------KYR---------------------------L----------QFVMAILIPFFQHVTR 188 (365)
Q Consensus 167 ~f---------------------~~~---------------------------~----------~~~~~~~~~~~~~~~~ 188 (365)
.| +.. + +..+......+.....
T Consensus 187 ~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (438)
T TIGR00712 187 ALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLL 266 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHH
Confidence 88 000 0 0011111222222223
Q ss_pred ccchhhcHHHHHHH-cCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCC
Q 017823 189 INVISFYAPVLFRT-IKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDH 267 (365)
Q Consensus 189 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 267 (365)
......|.|.++++ .|+++.+++ ....+..+.+++++++.++++||+++++....+.....+..+...... ..
T Consensus 267 ~~~~~~~~p~~l~~~~g~s~~~~~-~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~-~~---- 340 (438)
T TIGR00712 267 RYGVLDWSPTYLKEVKHFALDKSS-WAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYW-MN---- 340 (438)
T ss_pred HHHHHHhHHHHHHHccCCChhhHH-HHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHH-hc----
Confidence 34566788888865 688888888 778888899999999999999999654322223222222111111110 00
Q ss_pred CCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 268 GGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+....+.........+.+. .+..........|.+|++.|+++.|+.+..
T Consensus 341 ---~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 389 (438)
T TIGR00712 341 ---PAGNPLVDMICMIVIGFLI-YGPVMLIGLHALELAPKKAAGTAAGFTGLF 389 (438)
T ss_pred ---CCCchHHHHHHHHHHHHHH-ccHHHHHHHHHHHhcChhheeeehhhhchH
Confidence 0011122222222222221 111112123457999999999999988655
No 63
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.86 E-value=2.9e-20 Score=178.90 Aligned_cols=279 Identities=10% Similarity=0.051 Sum_probs=193.4
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhhHHH-HHHHHHHHHHHHHHHHh---hhHHHHHHHHHHh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAF-----GRKASI-LVRSTAFLAGSALRGAA---FNIYMLIFGRVLL 79 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~-----Grk~~l-~~~~~~~~~~~~~~~~a---~~~~~~~~~r~l~ 79 (365)
++.|+|.++.++.... .+...+ .+++|+++||+ ||||.+ +.+..+.++.....++. .+.+.+....++.
T Consensus 16 ~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~ 93 (356)
T TIGR00901 16 RSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLI 93 (356)
T ss_pred HHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHH
Confidence 4567789999999655 455555 99999999998 899975 56777777776677776 4566777778888
Q ss_pred hcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcccc
Q 017823 80 GVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIK 159 (365)
Q Consensus 80 G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 159 (365)
+.+.+...+ ...+++.|+.|+|+|++++++...+..+|.++++.++..+....
T Consensus 94 ~~~~~~~~~---------------------------~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~ 146 (356)
T TIGR00901 94 AFFSATQDI---------------------------ALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPE 146 (356)
T ss_pred HHHHHHHHH---------------------------HHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 888888878 88889999999999999999999999999999999987776332
Q ss_pred C-----CcchHHHH------------------Hh-----------------------HHHH---HHHHHHHHHHhccccc
Q 017823 160 V-----GWGWRISL------------------KY-----------------------RLQF---VMAILIPFFQHVTRIN 190 (365)
Q Consensus 160 ~-----~~gwr~~f------------------~~-----------------------~~~~---~~~~~~~~~~~~~~~~ 190 (365)
. .++||..| +. +++. ........+.......
T Consensus 147 g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (356)
T TIGR00901 147 FANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQEDASVPKPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDS 226 (356)
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 2 23499988 00 0000 1222222222233444
Q ss_pred chhhcHHHHHHHcCCCcchhhHHHHHHHH-HHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCC
Q 017823 191 VISFYAPVLFRTIKLSESTSLLMSAIVTG-SLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGG 269 (365)
Q Consensus 191 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 269 (365)
....+.|.++++.|+++++.+ ......+ +..+++.++++++.||+|||+.+..+.++..+....+....... .+.+
T Consensus 227 ~~~~~~~~~l~~~g~~~~~~g-~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~ 303 (356)
T TIGR00901 227 AATVLTTLFLLDMGFSKEEIA-LVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNG--HHDG 303 (356)
T ss_pred HHHHHHHHHHHHcCCCHHHHH-HHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcC--cccc
Confidence 555677888877899888877 5555544 57789999999999999999998888777766655544431000 0000
Q ss_pred CchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 270 FSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.+.+..+....+..+.+++.+....+. ..+..|.+|+++|++.+|+.+..
T Consensus 304 ~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~p~~~~g~~~g~~~~~ 353 (356)
T TIGR00901 304 ITFPHLLMLFLTITLEAVTGGLGTVAF-VAFLSKLSNPKFGATQMALLSSL 353 (356)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHH-HHHHHHhcCCCccHHHHHHHHHH
Confidence 001223334444444455554444444 56669999999999999988754
No 64
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.86 E-value=2.8e-20 Score=182.14 Aligned_cols=260 Identities=10% Similarity=0.017 Sum_probs=185.3
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQV 89 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~ 89 (365)
+++.++.+.+++.+.+.+++.+.+++.|+++||+|||++++.+..+..++++.+.++.++ ++.|+++|++.+...|
T Consensus 32 ~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~p- 107 (393)
T PRK11195 32 ELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSP- 107 (393)
T ss_pred HcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH-
Confidence 455668899999999999999999999999999999999999999999998888777664 7889999999999999
Q ss_pred hhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH-
Q 017823 90 SVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL- 168 (365)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f- 168 (365)
...+++.|++|+++|++++++.+....+|.++||.+++.+.+. .|+..+
T Consensus 108 --------------------------a~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~----~~~~~~~ 157 (393)
T PRK11195 108 --------------------------AKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP----HAEAALA 157 (393)
T ss_pred --------------------------HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHH
Confidence 9999999999999999999999999999999999988776531 122222
Q ss_pred -------------------------------------------HhHHHHHH-HHHHHHHHhcccccchhhcHHHHH-HHc
Q 017823 169 -------------------------------------------KYRLQFVM-AILIPFFQHVTRINVISFYAPVLF-RTI 203 (365)
Q Consensus 169 -------------------------------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 203 (365)
..+++... ......+. ........+..|.+. +..
T Consensus 158 i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l 236 (393)
T PRK11195 158 VCALIYLLAALFNLFIPRLGARRPGQSWNPIALLRDFFHACRVLWRDKLGRFSLAGTTLF-WGAGATLRFLVLAWAPVAL 236 (393)
T ss_pred HHHHHHHHHHHHHhcCCCCcccccccCCCHHHHHHHHHHHHHHHHhCchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHc
Confidence 00011111 11111111 111222333445555 457
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHH
Q 017823 204 KLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLIC 283 (365)
Q Consensus 204 g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (365)
|.++.+.+ ......+++.+++++..+++.||.++|+.+..+. ...+..+.+... +..+.......
T Consensus 237 g~s~~~~G-~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~-------------~~~~~~~~~~~ 301 (393)
T PRK11195 237 GITLNQPA-YLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQ-------------HSLLPAYPLLI 301 (393)
T ss_pred CCChhHHH-HHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHH-------------hHHHHHHHHHH
Confidence 89999988 8889999999999999999999999888776664 333332222221 22333344444
Q ss_pred HHHHhhccccccccccccccCCChhh-hhHHHHHHHHH
Q 017823 284 VYKAGFAFSWGPLRWLVPSENFPLEI-ISAGQIITVAA 320 (365)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~e~~p~~~-r~~~~~~~~~~ 320 (365)
+.+.+.+....+.. ....|..|++. +|++.++.+..
T Consensus 302 ~~G~~~g~~~~~~~-~~~q~~~~~~~~~g~~~a~~~~~ 338 (393)
T PRK11195 302 LIGALGGFFVVPMN-ALLQHRGHVLVGAGHSIAVQNFN 338 (393)
T ss_pred HHHHhhhhhhhhHH-HHHHhhCcccccchhHHHHHhHH
Confidence 55555554444543 44467666654 78888888777
No 65
>PRK10133 L-fucose transporter; Provisional
Probab=99.86 E-value=2.2e-20 Score=185.59 Aligned_cols=267 Identities=12% Similarity=0.085 Sum_probs=191.8
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH---HHhhhHHHHHHHHHHhhcchh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALR---GAAFNIYMLIFGRVLLGVGIG 84 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~---~~a~~~~~~~~~r~l~G~~~g 84 (365)
+++++.|+.+.++..+.+.+++.+++++.|++.||+|||+++..+..++.++.+++ .++++++.++++|+++|+|.|
T Consensus 53 ~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g 132 (438)
T PRK10133 53 QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLG 132 (438)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 45667779999999999999999999999999999999999999999999999875 467899999999999999999
Q ss_pred hhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcc-cc----
Q 017823 85 FANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQK-IK---- 159 (365)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~-~~---- 159 (365)
...+ ....++.|..|+++|.+.++..+....+|..+++.++..+.. ..
T Consensus 133 ~~~~---------------------------~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~ 185 (438)
T PRK10133 133 CLET---------------------------AANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQS 185 (438)
T ss_pred HHHh---------------------------hHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 9999 888888888777777778899999999999999988765431 10
Q ss_pred ------------CC------cchHHHH-------------------------Hh----------------HHHHHHHHHH
Q 017823 160 ------------VG------WGWRISL-------------------------KY----------------RLQFVMAILI 180 (365)
Q Consensus 160 ------------~~------~gwr~~f-------------------------~~----------------~~~~~~~~~~ 180 (365)
.. .+||..| +. +++......+
T Consensus 186 ~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l 265 (438)
T PRK10133 186 QDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVL 265 (438)
T ss_pred hhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccccccchhhhHHHHHhCchHHHHHH
Confidence 00 1456555 00 0111111222
Q ss_pred HHHHhcccccchhhcHHHHH-H-HcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHH
Q 017823 181 PFFQHVTRINVISFYAPVLF-R-TIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGS 258 (365)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~-~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~ 258 (365)
..+...........|.+.++ + ..|+++.+.+ .......++.++++.+++++.||+|+|+.+..+..+..+..+....
T Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag-~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~ 344 (438)
T PRK10133 266 AQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAA-NYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAF 344 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 22222223333444666664 4 4699999999 8999999999999999999999999999988876666555444332
Q ss_pred HHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHH
Q 017823 259 IMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITV 318 (365)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~ 318 (365)
. + . . .......+.+++.+..+++. .....|..|++ .+++.++..
T Consensus 345 ~-----------~-~-~-~~~~~~~l~glg~~~i~P~~-~s~a~~~~~~~-~~~as~l~~ 388 (438)
T PRK10133 345 A-----------G-G-H-VGLIALTLCSAFMSIQYPTI-FSLGIKNLGQD-TKYGSSFIV 388 (438)
T ss_pred c-----------C-C-h-HHHHHHHHHHHHHHHHHHHH-HHHHHcccchh-hccchhHHh
Confidence 2 1 1 1 12334445556665555544 55556777664 455555554
No 66
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.86 E-value=4.1e-20 Score=180.60 Aligned_cols=257 Identities=18% Similarity=0.115 Sum_probs=180.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhhhhhhhc
Q 017823 18 LTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSVWLFYFS 97 (365)
Q Consensus 18 ~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~ 97 (365)
.+++.+++.++..+++++.|+++||+|||+.+..+..+..++.++..++++++.+++.|++.|++.+ ..+
T Consensus 56 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~--------- 125 (408)
T PRK09874 56 SGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVP--------- 125 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHH---------
Confidence 5889999999999999999999999999999999999999999999999999999999999999755 445
Q ss_pred ccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH---------
Q 017823 98 QTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL--------- 168 (365)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f--------- 168 (365)
....++.|..|+++|+++++..+.+..+|..+++.++..+.+ ..+||..+
T Consensus 126 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~ 184 (408)
T PRK09874 126 ------------------NANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD---SYGLRPVFFITASVLFL 184 (408)
T ss_pred ------------------hHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCHHHHHHHHHHHHHH
Confidence 566677899999999999999999999999999999988763 35688776
Q ss_pred ---------H---------h------------HHHHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcch----hhHHH
Q 017823 169 ---------K---------Y------------RLQFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSEST----SLLMS 214 (365)
Q Consensus 169 ---------~---------~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~ 214 (365)
+ . +++.....................+.|.+.++.+.+..+ .+ ..
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~ 263 (408)
T PRK09874 185 CFLVTLFCIRENFQPVSKKEMLHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISG-MI 263 (408)
T ss_pred HHHHHHHHhccCcccccchhhhHHHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH-HH
Confidence 0 0 011111111111111112223334456666554333322 22 44
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccc
Q 017823 215 AIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWG 294 (365)
Q Consensus 215 ~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (365)
..+.+++.+++.+..++++||++||+.+..+.....+..+..... +..+...+...+.+++.+...
T Consensus 264 ~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~g~~~~~~~- 329 (408)
T PRK09874 264 ASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFV-------------QTPLQLGILRFLLGAADGALL- 329 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHh-------------ccHHHHHHHHHHHHhhhHhhH-
Confidence 556677888889999999999999999888877666555544432 112333344444455444333
Q ss_pred cccccccccCCChhhhhHHHHHHHHH
Q 017823 295 PLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 295 ~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+.......+..|++.|++..++.+..
T Consensus 330 ~~~~~~~~~~~~~~~~g~~~~~~~~~ 355 (408)
T PRK09874 330 PAVQTLLVYNSSNQIAGRIFSYNQSF 355 (408)
T ss_pred HHHHHHHHHhCCcccceeeehHHHHH
Confidence 33334446778888889888876655
No 67
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.86 E-value=3.4e-20 Score=182.64 Aligned_cols=269 Identities=13% Similarity=0.061 Sum_probs=198.6
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHhhcchh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA---FNIYMLIFGRVLLGVGIG 84 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a---~~~~~~~~~r~l~G~~~g 84 (365)
+++++.|+.+.|++.+.+++++.+++++.|++.||+|||+.+..+..+++++.++...+ ++++.+++.|++.|+|.|
T Consensus 30 ~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g 109 (410)
T TIGR00885 30 QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLG 109 (410)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHH
Confidence 45667779999999999999999999999999999999999999999999999886543 589999999999999999
Q ss_pred hhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcccc-----
Q 017823 85 FANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIK----- 159 (365)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~----- 159 (365)
...+ ....++.+..|+++|++..++.+...++|..+++.++..+....
T Consensus 110 ~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~ 162 (410)
T TIGR00885 110 FLET---------------------------AANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQS 162 (410)
T ss_pred HHHh---------------------------hhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccch
Confidence 9999 88889999999999999999999999999999999987664221
Q ss_pred ------------------CCcchHHHH-------------------H-----------h--------H-HHHHHHHHHHH
Q 017823 160 ------------------VGWGWRISL-------------------K-----------Y--------R-LQFVMAILIPF 182 (365)
Q Consensus 160 ------------------~~~gwr~~f-------------------~-----------~--------~-~~~~~~~~~~~ 182 (365)
+..+||.+| + . + ++....... .
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~ 241 (410)
T TIGR00885 163 QDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHSDAKQISFSASLSRLARIRHYREGVIA-Q 241 (410)
T ss_pred hhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccccchhhHHHHHhChhHHHHHHH-H
Confidence 123699887 0 0 0 122222222 3
Q ss_pred HHhcccccchhhcHHHHHHHcC--CCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHH
Q 017823 183 FQHVTRINVISFYAPVLFRTIK--LSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIM 260 (365)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~ 260 (365)
+...........|.+.+.++.+ .+..... ...........+|+++++++.||+++|+.+.++.....+..+......
T Consensus 242 f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~-~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~ 320 (410)
T TIGR00885 242 FFYVGVQIMCWTFIIQYAVRLIPGMTAGFAA-NYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAG 320 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3333344445566777776543 3333334 455566678899999999999999999998888777777766665531
Q ss_pred hhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 261 ADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+ ........+.+++.+..+ |..+....+..+++.+..+.++..+.
T Consensus 321 ------------~--~~~~~~l~~~glf~s~~f-p~i~sl~~~~~g~~~~~~s~~l~~~~ 365 (410)
T TIGR00885 321 ------------G--HVGLYCLTLCSAFMSLMF-PTIYGIALKGLGQDTKYGAAGLVMAI 365 (410)
T ss_pred ------------C--hHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhhhHHHHHHHH
Confidence 1 122344444445555566 55577778888887765555555544
No 68
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.86 E-value=4.9e-20 Score=183.17 Aligned_cols=270 Identities=15% Similarity=0.118 Sum_probs=209.4
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHhhcchhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAF--NIYMLIFGRVLLGVGIGF 85 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~--~~~~~~~~r~l~G~~~g~ 85 (365)
+.++++|+++.+++.++++.|+.+++++.|++.||+|-|+++..+.++.++++++...+. +++.+++.|+++|++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 457999999999999999999999999999999999999999999999999999999884 456889999999999999
Q ss_pred hhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchH
Q 017823 86 ANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWR 165 (365)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr 165 (365)
.+| ....+.++|+|+++|++..++...+..+|.+++.++++.+.+. ..||+
T Consensus 145 ~~p---------------------------a~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s--~~GW~ 195 (466)
T KOG2532|consen 145 LFP---------------------------AIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES--SLGWP 195 (466)
T ss_pred HHh---------------------------hhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc--CCCCc
Confidence 999 9999999999999999999999999999999999999988844 27899
Q ss_pred HHH-------------------------------------------------------HhHHHHHHHHHHHHHHhccccc
Q 017823 166 ISL-------------------------------------------------------KYRLQFVMAILIPFFQHVTRIN 190 (365)
Q Consensus 166 ~~f-------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 190 (365)
..| -.+.+.++.+.+..+.+..+..
T Consensus 196 sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~ 275 (466)
T KOG2532|consen 196 SIFYVFGIVGLIWFILWFLFYSDSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFY 275 (466)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 998 1122456666677777777888
Q ss_pred chhhcHHHHHH-HcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcc---------hHHHHhHHHHHHHHHHHHHHH
Q 017823 191 VISFYAPVLFR-TIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRK---------VLFLVGGIQMLVSRVMIGSIM 260 (365)
Q Consensus 191 ~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr---------~~l~~~~~~~~i~~~~~~~~~ 260 (365)
.+..|.|.|++ .+|++..+.+ +...+..+...+..+++|.++||+.+| ..-.++....++.++.+++.
T Consensus 276 ~l~~y~PtY~~~VL~f~v~~~G-~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~- 353 (466)
T KOG2532|consen 276 LLLTYLPTYLKEVLGFDVRETG-FLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFT- 353 (466)
T ss_pred HHHHHhhHHHHHHhCCChhhhh-HHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeec-
Confidence 99999999995 5799999999 999999999999999999999998662 12234444444555544443
Q ss_pred hhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 261 ADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+....+..++++.+.....+...+.. +.-..+. -+++-+...|+.+..
T Consensus 354 ----------~~~~~~~a~~~l~~~~~~~g~~~~Gf-~~~~~~~-apq~a~~l~g~~~~~ 401 (466)
T KOG2532|consen 354 ----------SDEHRLLAVILLTIAIGLSGFNISGF-YKNHQDI-APQHAGFVMGIINFV 401 (466)
T ss_pred ----------CCCcchHHHHHHHHHHHHcccchhhh-Hhhhhhc-cchHHHHHHHHHHHH
Confidence 11122333333333222222222221 1111222 445678888888887
No 69
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.86 E-value=1.1e-19 Score=177.76 Aligned_cols=265 Identities=15% Similarity=0.130 Sum_probs=170.6
Q ss_pred CccccCCchHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhHHH-HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYI-AGLIASLFASSVTRAFGRKASI-LVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGF 85 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i-~~~i~~~~~g~l~dr~Grk~~l-~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~ 85 (365)
.++++.|.++.|++.+...+ +..++.++.+. .||+||||.+ ..+.++.+++..+.+++++++.+++.+.+.|...+.
T Consensus 43 ~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 121 (393)
T PRK15011 43 TDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGST 121 (393)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHh
Confidence 45667779999999877655 55555555555 9999999875 456666677788888999999887766655544456
Q ss_pred hhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCc--chhhhHHHHHHHHHHHHHHHHhhhhccccCCcc
Q 017823 86 ANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNR--GAFNIGFQVCVATAVLSANLLNYGTQKIKVGWG 163 (365)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r--~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~g 163 (365)
..+ ....+..|+.|+++| +..++..+.+.++|.+++++++..+. +..|
T Consensus 122 ~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~---~~~g 171 (393)
T PRK15011 122 ANP---------------------------QMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALA---MGFS 171 (393)
T ss_pred hHH---------------------------HHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHH---HhcC
Confidence 666 666677777666555 34557888899999999999999887 3457
Q ss_pred hHHHH------------------H------------------hHHHHHHHHHHHHHHhcccccchhhcHHHHH-HHcCCC
Q 017823 164 WRISL------------------K------------------YRLQFVMAILIPFFQHVTRINVISFYAPVLF-RTIKLS 206 (365)
Q Consensus 164 wr~~f------------------~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~ 206 (365)
||..| + .++..+......... .........+.|.++ ++.|.+
T Consensus 172 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~l~~~~~~~ 250 (393)
T PRK15011 172 FTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATGTLEAPRRNRRDTLLLFVICTLM-WGTNSLYIINMPLFIINELHLP 250 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCccCCCCccccccccccccccccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCC
Confidence 99988 0 001112222222222 223333445677777 557888
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHH
Q 017823 207 ESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYK 286 (365)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (365)
+.+.+ .......+..+++.++.|+++||++||+.+..+.....+........ +..+..+....+..
T Consensus 251 ~~~~g-~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~l~~~~l~~ 316 (393)
T PRK15011 251 EKLAG-VMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMA-------------HSPAILLGLQLLNA 316 (393)
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH-------------hhHHHHHHHHHHHH
Confidence 88877 66666677788899999999999999998776655444433322211 11222222222222
Q ss_pred HhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 287 AGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 287 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+..+...+.. ..+..|.+|++ |+++.++.+..
T Consensus 317 ~~~g~~~~~~-~~~~~~~~p~~-~g~~~~~~~~~ 348 (393)
T PRK15011 317 IYIGILGGIG-MLYFQDLMPGQ-AGSATTLYTNT 348 (393)
T ss_pred HHHHHHHHHH-HHHHHHhCCCC-cchHHHHHHHH
Confidence 2222222222 34457888864 88888887665
No 70
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.85 E-value=6.4e-20 Score=180.07 Aligned_cols=267 Identities=14% Similarity=0.144 Sum_probs=193.6
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.++.|.|+.+.|.+.+...+...+.+++.|+++||+|||+.+..+.++..++.+...++++++.+++.|++.|++.+...
T Consensus 38 ~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~ 117 (400)
T PRK11646 38 VDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFD 117 (400)
T ss_pred HHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+ ...+++.|..|+++|++++++.+....+|..+|+.+++.+.+ ++||..
T Consensus 118 ~---------------------------~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~----~g~~~~ 166 (400)
T PRK11646 118 P---------------------------PRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ----YDFRLV 166 (400)
T ss_pred H---------------------------HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hhHHHH
Confidence 8 778888999999999999999999999999999999988862 468887
Q ss_pred H------------------Hh------------------HHHHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhh
Q 017823 168 L------------------KY------------------RLQFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSL 211 (365)
Q Consensus 168 f------------------~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 211 (365)
| +. +++.........+...........+.|.+.++.+.++.+.+
T Consensus 167 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g 246 (400)
T PRK11646 167 CATGAVLFVLAAAFNAWLLPAYKLSTVRTPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVK 246 (400)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccccccchhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHH
Confidence 7 00 00111111111111111112234567888877666766666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh-hhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhc
Q 017823 212 LMSAIVTGSLGTISTSLSMILAD-RLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFA 290 (365)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~g~l~d-r~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (365)
.......+....+....+++.| |++.++.+..+..+..++.+.+... +..+...+...+++.+..
T Consensus 247 -~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~-------------~~~~~~~~~~~l~~~g~~ 312 (400)
T PRK11646 247 -WMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV-------------SNLQQLFTLICLFYIGSI 312 (400)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh-------------hhHHHHHHHHHHHHHHHH
Confidence 6666666666655555566655 4666666666766666666555443 112233333344444443
Q ss_pred cccccccccccccCCChhhhhHHHHHHHHH
Q 017823 291 FSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 291 ~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.. .|....+..|..|++.|++++|+.+..
T Consensus 313 ~~-~p~~~~~~~~~~p~~~~g~~~g~~~~~ 341 (400)
T PRK11646 313 IA-EPARETLSASLADARARGSYMGFSRLG 341 (400)
T ss_pred HH-HccHHHHHHhcCCcccchhhhhHHHHH
Confidence 33 333345668999999999999988776
No 71
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.85 E-value=7.5e-20 Score=174.57 Aligned_cols=273 Identities=16% Similarity=0.118 Sum_probs=209.2
Q ss_pred cCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhH---HHHHHHHHHhhcch
Q 017823 7 ISNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNI---YMLIFGRVLLGVGI 83 (365)
Q Consensus 7 ~~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~---~~~~~~r~l~G~~~ 83 (365)
+++++++|+.|.+++.++..+..++..++.|.+.||+|.|+....++.+..+-++..+++.+. +++++++.+.|++.
T Consensus 40 i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~G 119 (417)
T COG2223 40 IKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAG 119 (417)
T ss_pred hccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhccc
Confidence 447788889999999999999999999999999999999999999999999999999998544 59999999999984
Q ss_pred hhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcc
Q 017823 84 GFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWG 163 (365)
Q Consensus 84 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~g 163 (365)
+ .+. +...++++++||+++|.++++.. ..++|..+...++..+.. ..+
T Consensus 120 a-sFa---------------------------v~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~---~~g 167 (417)
T COG2223 120 A-SFA---------------------------VGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAV---AFG 167 (417)
T ss_pred c-eeh---------------------------cccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHH---HHh
Confidence 4 455 68888999999999999999998 777777777766666552 223
Q ss_pred ---hHHHH-------------------------------H-------hHHHHHHHHHHHHHHhcccccchhhcHHHHH-H
Q 017823 164 ---WRISL-------------------------------K-------YRLQFVMAILIPFFQHVTRINVISFYAPVLF-R 201 (365)
Q Consensus 164 ---wr~~f-------------------------------~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 201 (365)
||... + .+++-.+.+....+..+.++..++.+.|.++ +
T Consensus 168 ~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~ 247 (417)
T COG2223 168 FLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVT 247 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccchhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66554 1 1122233333444444667778888999998 6
Q ss_pred HcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHH
Q 017823 202 TIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVL 281 (365)
Q Consensus 202 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (365)
+++.++.+++ .......+.+.+.++++|+++||+|.+|........++++.......... .....+.......
T Consensus 248 ~fg~~~~~Ag-~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~------~~~~~~~~~~~~~ 320 (417)
T COG2223 248 QFGLSPVTAG-LIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTG------FGHGGSFVVFVAV 320 (417)
T ss_pred hcCCChhhHH-HHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccc------cccCcchHHHHHH
Confidence 6899999998 88999999999999999999999999999999998888888877765311 0011233444444
Q ss_pred HHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 282 ICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
........+.+-+.+ +-+++..+|. +.|...|+..++
T Consensus 321 ~l~l~~~~G~GnGsv-fk~Ip~if~~-~~G~v~G~vga~ 357 (417)
T COG2223 321 FLALFVFAGLGNGSV-FKMIPVIFPK-ETGAVTGIVGAI 357 (417)
T ss_pred HHHHHHHhccCcchh-eeechHHHHh-hhhHHHHHHHHh
Confidence 444455556665555 4444666666 557778888877
No 72
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.85 E-value=1.8e-19 Score=175.90 Aligned_cols=270 Identities=16% Similarity=0.159 Sum_probs=187.4
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
.+++|.|+.+.+++.+.+.++..+++++.|+++||+|||+.+..+..+..++.++..++++++.+++.|++.|++.+...
T Consensus 35 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~ 114 (394)
T PRK11652 35 ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGG 114 (394)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHH
Confidence 35677889999999999999999999999999999999999999999999999999999999999999999999988877
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+ ....+..|..++++|+++++..+.+..+|..+++.++..+. +..+||..
T Consensus 115 ~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~---~~~g~~~~ 164 (394)
T PRK11652 115 V---------------------------MARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLT---TLFGWRAC 164 (394)
T ss_pred H---------------------------HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccChHHH
Confidence 7 66677788899999999999999999999999999988876 34579988
Q ss_pred H------------------H-------------------hHHHHHHHHHHHHHHhcccccchhhcHHHHHHH-cCCCcch
Q 017823 168 L------------------K-------------------YRLQFVMAILIPFFQHVTRINVISFYAPVLFRT-IKLSEST 209 (365)
Q Consensus 168 f------------------~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~ 209 (365)
+ + .+++.........+...........+.+.++++ .|.++.+
T Consensus 165 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 244 (394)
T PRK11652 165 YLFLLLLGAGVTFSMARWMPETRPADARRTRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMT 244 (394)
T ss_pred HHHHHHHHHHHHHHHHHhCCccCccccchhHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHH
Confidence 7 0 001111111111222122233333345556654 7888887
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhh
Q 017823 210 SLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGF 289 (365)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (365)
.+ .......++..++..+.+++.||.+++.... .....+..+.+...... ...+.+.......+.+.+.
T Consensus 245 ~~-~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~g~ 313 (394)
T PRK11652 245 VS-ILFILPIPAAFFGAWFAGRPNKRFSTLMWQS--VICCLLAGLLMWIPGWF--------GVMNVWTLLVPAALFFFGA 313 (394)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHh--------ccccHHHHHHHHHHHHHHH
Confidence 77 6667777778888888888888887433222 22222222222111100 0112333444445555555
Q ss_pred ccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 290 AFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 290 ~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+... |.......|.+| +.++++.++.+..
T Consensus 314 ~~~~-~~~~~~~~~~~~-~~~g~~~~~~~~~ 342 (394)
T PRK11652 314 GMLF-PLATSGAMEPFP-YLAGTAGALLGGL 342 (394)
T ss_pred HHHH-HHHHHHHHhhcc-ccchHHHHHHHHH
Confidence 4433 333455568777 4678888887766
No 73
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.84 E-value=1e-19 Score=181.56 Aligned_cols=212 Identities=19% Similarity=0.169 Sum_probs=179.3
Q ss_pred cCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhh
Q 017823 7 ISNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFA 86 (365)
Q Consensus 7 ~~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~ 86 (365)
.++|.++...+.+.+.++++++++++.++++++.||++..+.+....+.+.+..++....+|++.+++.|++.|+.++..
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~ 151 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGG 151 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccc
Confidence 44566666999999999999999999999999999999999999999999999988888999999999999999999999
Q ss_pred hhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcccc---CCcc
Q 017823 87 NQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIK---VGWG 163 (365)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~---~~~g 163 (365)
+| ....++..|+.+++|+..++++..+..+|.++|+++++.+.+.. ...|
T Consensus 152 wP---------------------------~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~g 204 (495)
T KOG2533|consen 152 WP---------------------------GVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAG 204 (495)
T ss_pred ch---------------------------HHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCC
Confidence 99 89999999999999999999999999999999999999865422 2468
Q ss_pred hHHHH-----------------------------------------------------------HhHHHHHHHHHHHHHH
Q 017823 164 WRISL-----------------------------------------------------------KYRLQFVMAILIPFFQ 184 (365)
Q Consensus 164 wr~~f-----------------------------------------------------------~~~~~~~~~~~~~~~~ 184 (365)
||+.| -.+.+-.+...+..+.
T Consensus 205 W~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~ 284 (495)
T KOG2533|consen 205 WRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFF 284 (495)
T ss_pred ceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHH
Confidence 99999 1112234444444555
Q ss_pred hcccccchhhcHHHHHHH-cCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhh----hCcchHHHHhH
Q 017823 185 HVTRINVISFYAPVLFRT-IKLSESTSLLMSAIVTGSLGTISTSLSMILADR----LGRKVLFLVGG 246 (365)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~grr~~l~~~~ 246 (365)
.....+.+.+|.|.++++ .|++..++. .+.++..++++++.+++|+++|| ..+|.......
T Consensus 285 ~~lv~~~~~~~lpl~l~~~~~~s~~~a~-~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~ 350 (495)
T KOG2533|consen 285 LKLVNYGFSYWLPLYLKSNGGYSELQAN-LLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFL 350 (495)
T ss_pred HhhccccHHHHHHHHHHcCCCcChHHhc-cccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 455678889999999988 568888888 89999999999999999999999 44554444433
No 74
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.83 E-value=5.2e-19 Score=172.36 Aligned_cols=262 Identities=15% Similarity=0.076 Sum_probs=197.8
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHH----HHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASI----LVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIG 84 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l----~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g 84 (365)
+++|+|.+++|++.+++.+...+++++.|+++||+|||+.. ..+..+..+ .....+++++.+++.|+++|.+.+
T Consensus 32 ~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~l~~~~~~ 109 (382)
T TIGR00902 32 KGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIAIGLFALFFS 109 (382)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHHHHHHHHc
Confidence 35678899999999999999999999999999999985433 222222222 244467899999999999998888
Q ss_pred hhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcch
Q 017823 85 FANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGW 164 (365)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gw 164 (365)
...+ ...++..|+ +++|++..+......++|.++++++++.+. +.+||
T Consensus 110 ~~~p---------------------------~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~---~~~g~ 157 (382)
T TIGR00902 110 AGMP---------------------------IGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLI---GMFDE 157 (382)
T ss_pred cchh---------------------------HHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHH---HHcCh
Confidence 8777 666665554 578899999999999999999999988887 44578
Q ss_pred HHHH-----------------H----------------------hHHHHHHHHHHHHHHhcccccchhhcHHHHHHHcCC
Q 017823 165 RISL-----------------K----------------------YRLQFVMAILIPFFQHVTRINVISFYAPVLFRTIKL 205 (365)
Q Consensus 165 r~~f-----------------~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 205 (365)
|..| + .|++.++......+...........+.|.++++.|.
T Consensus 158 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~ 237 (382)
T TIGR00902 158 QNILAILTAGLAFMLIGFLIKPTIPPKDAIPEDESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGI 237 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCCCCCccccccccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 8877 0 011112222232232234556666788888888999
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHH
Q 017823 206 SESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVY 285 (365)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (365)
++...+ .......+..+++..+.+++.||+|+|+.+.++.+...+........ ++.+.......+.
T Consensus 238 s~~~~g-~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~~~~~q~l~ 303 (382)
T TIGR00902 238 SASATG-LLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAI-------------EAFPLIFLLQILH 303 (382)
T ss_pred CHhHHH-HHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhH-------------hhHHHHHHHHHHH
Confidence 999998 77788889999999999999999999999999988888887777654 3345566667777
Q ss_pred HHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 286 KAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 286 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+..++....+. ..++++. |+++|++++++.++.
T Consensus 304 g~~~~~~~~~~-~~~i~~~-~~~~~~~~q~~~~~~ 336 (382)
T TIGR00902 304 CGTFAVCHLAA-MRYIAAQ-PGSEIAKLQALYNAL 336 (382)
T ss_pred HHHHHHHHHHH-HHHHHhC-CHhhHHHHHHHHHHH
Confidence 77776655554 4455677 999999999987643
No 75
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.83 E-value=3.2e-19 Score=196.32 Aligned_cols=264 Identities=13% Similarity=-0.006 Sum_probs=193.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH---HhhhHHHHHHHHHHhhcchhhhhhhhh
Q 017823 15 SQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRG---AAFNIYMLIFGRVLLGVGIGFANQVSV 91 (365)
Q Consensus 15 ~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~---~a~~~~~~~~~r~l~G~~~g~~~~~~~ 91 (365)
....+++.+++.++..++++++|+++||+|||++++.+.++..+..++.. .+++++.++++|++.|++.+...+
T Consensus 46 ~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~--- 122 (1146)
T PRK08633 46 VILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSP--- 122 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhch---
Confidence 45579999999999999999999999999999999988876655555443 457899999999999999999999
Q ss_pred hhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcccc------CCcchH
Q 017823 92 WLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIK------VGWGWR 165 (365)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~------~~~gwr 165 (365)
...+++.|++|+++|++++++.+.+..+|.++|+.+++++.... ...+|+
T Consensus 123 ------------------------~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~ 178 (1146)
T PRK08633 123 ------------------------AKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRI 178 (1146)
T ss_pred ------------------------HHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccch
Confidence 88899999999999999999999999999999999998876430 001222
Q ss_pred HHH-------------------------Hh---------------------HHHHHHHHHHHHHHhcccccchhhcHHHH
Q 017823 166 ISL-------------------------KY---------------------RLQFVMAILIPFFQHVTRINVISFYAPVL 199 (365)
Q Consensus 166 ~~f-------------------------~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (365)
+.+ .. +++.+....+..+...........+.|.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (1146)
T PRK08633 179 APAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAY 258 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 222 00 00111222221221122223344456666
Q ss_pred H-HHcCCCcc-hhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHH
Q 017823 200 F-RTIKLSES-TSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYL 277 (365)
Q Consensus 200 ~-~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (365)
+ +..|.+.. ..+ .......++.+++.++.+++.||+++++.+.++.++.+++.+.+... ...+.
T Consensus 259 ~~~~~g~s~~~~~g-~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~ 324 (1146)
T PRK08633 259 AKEVLGLDNTFQVQ-YLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA-------------PSLAS 324 (1146)
T ss_pred HHHHhCCCcHHHHH-HHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh-------------hhHHH
Confidence 6 56788888 777 88888899999999999999999999988888777777766666543 12334
Q ss_pred HHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 278 ILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.++..++++++.+....+. ..+..+..|++.||++.|+.+.+
T Consensus 325 ~~~~~~~~g~~~~~~~~~~-~~~~~~~~p~~~rg~~~~~~~~~ 366 (1146)
T PRK08633 325 VLVLFFLFGFSAGLFIVPL-NALIQFRAPEKELGKVLAANNFL 366 (1146)
T ss_pred HHHHHHHHHHHHHHhhHHH-HHHHhhcCCccchhhhhHHHHHH
Confidence 4444555555555444443 55668999999999998887765
No 76
>PRK10054 putative transporter; Provisional
Probab=99.82 E-value=3.3e-19 Score=174.71 Aligned_cols=265 Identities=10% Similarity=0.026 Sum_probs=189.7
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
++++|+|..+.|++.+.+.++..+++++.|+++||+|||+++..+..+..++.++.+++++++.++++|++.|.+.+...
T Consensus 35 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 114 (395)
T PRK10054 35 SRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFS 114 (395)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 35678889999999999999999999999999999999999999999999999999999999999999999888777777
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+ ....+..|..|+++|+++.++.....++|..+++.++..+.+ .+||..
T Consensus 115 ~---------------------------~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~----~g~~~~ 163 (395)
T PRK10054 115 T---------------------------VLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM----QSINLP 163 (395)
T ss_pred H---------------------------HHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hccCcH
Confidence 7 777888999999999999999999999999999999988763 357777
Q ss_pred H-------------------Hh-------------------HHHHHHHHHHHHHHhcccccchhhcHHHHHH---HcCCC
Q 017823 168 L-------------------KY-------------------RLQFVMAILIPFFQHVTRINVISFYAPVLFR---TIKLS 206 (365)
Q Consensus 168 f-------------------~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~ 206 (365)
| +. +++.+......++... .......+.+.+.. +.+.+
T Consensus 164 f~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~ 242 (395)
T PRK10054 164 FWLAAICSAFPLVFIQIWVQRSEKAIATETGSVWSPSVLLQDKALLWFTCSGFLASF-VSGAFASCISQYVMVVADSDFA 242 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccccchhhhhhhhhhccCceehHHHHHHHHHHH-HHHHhhhhHHHHHHHhcccchH
Confidence 7 00 0111122222222111 12222224444442 23444
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHH
Q 017823 207 ESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYK 286 (365)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (365)
+...+ .......+.........+.+.||.++|+.+..+.....++...+.... +..+...+...+++
T Consensus 243 ~~~~g-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~ 309 (395)
T PRK10054 243 EKVVA-VVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSG------------NSLLLWGMSAAVFT 309 (395)
T ss_pred HHHHH-HHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcc------------hHHHHHHHHHHHHH
Confidence 44445 566666666667778889999999999988888777776665554321 12233334444555
Q ss_pred HhhccccccccccccccCCChhhhhHHHHHHH
Q 017823 287 AGFAFSWGPLRWLVPSENFPLEIISAGQIITV 318 (365)
Q Consensus 287 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~ 318 (365)
.+.. ...|.......+..|++.|+++.+..+
T Consensus 310 ~g~~-~~~p~~~~~~~~~~p~~~~~~~~~~~~ 340 (395)
T PRK10054 310 VGEI-IYAPGEYMLIDHIAPPGMKASYFSAQS 340 (395)
T ss_pred HHHH-HHHhhHHHHHHHhCCcccceehHhHHH
Confidence 5543 223444556678899999998877544
No 77
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.81 E-value=2.5e-18 Score=173.23 Aligned_cols=267 Identities=13% Similarity=0.043 Sum_probs=179.4
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhhHH-HHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHhhc
Q 017823 11 SKFDSQLLTTFTSSLYIAGLIASLFASSVTRAF-----GRKAS-ILVRSTAFLAGSALRGAA---FNIYMLIFGRVLLGV 81 (365)
Q Consensus 11 ~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~-----Grk~~-l~~~~~~~~~~~~~~~~a---~~~~~~~~~r~l~G~ 81 (365)
.|.|.++++.+ +.....+ +..+++|+++||+ |||+. +..+....+++....++. ++++.+.+.|++.|+
T Consensus 42 ~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~ 119 (491)
T PRK11010 42 ENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAF 119 (491)
T ss_pred CCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHH
Confidence 36668888886 3333333 6889999999999 99886 556777777777777675 478889999999999
Q ss_pred chhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCC
Q 017823 82 GIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVG 161 (365)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~ 161 (365)
+.+...+ ...++..|++|+++|++++++.+.+..+|.++++.++..+.+. .
T Consensus 120 ~~a~~~i---------------------------~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~--~ 170 (491)
T PRK11010 120 CSASQDI---------------------------VFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADR--Y 170 (491)
T ss_pred HHHHHHH---------------------------HHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--c
Confidence 9998888 8889999999999999999999999999999999998888741 3
Q ss_pred cchHHHH-------------------H----h------H------------HHHHHHHHHHHHHhcccccchhhcHHHHH
Q 017823 162 WGWRISL-------------------K----Y------R------------LQFVMAILIPFFQHVTRINVISFYAPVLF 200 (365)
Q Consensus 162 ~gwr~~f-------------------~----~------~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (365)
+|||..| + . + ++.+......... .........+.+.++
T Consensus 171 ~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~l~-~~~~~~~~~~~~~~l 249 (491)
T PRK11010 171 LGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLY-KLGDAFAMSLTTTFL 249 (491)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHhcCCCccccccccchhhhHHHHHHHHHcCcCHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 5899998 0 0 0 0001111111222 122223333445554
Q ss_pred -HHcCCCcchhhHHHH-HHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHH
Q 017823 201 -RTIKLSESTSLLMSA-IVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLI 278 (365)
Q Consensus 201 -~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (365)
++.|+++++.+ ... ....++.+++.+++|+++||+|+|+.+..+.++..+..+.+..... ..++.+..
T Consensus 250 ~~~~G~s~~~~g-~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~---------~~~~~~~l 319 (491)
T PRK11010 250 IRGVGFDAGEVG-LVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSI---------TDKNLYSM 319 (491)
T ss_pred HHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh---------ccccHHHH
Confidence 66899999888 665 4556789999999999999999998877666555554433332210 00112222
Q ss_pred HHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 279 LVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.....+..+..+.+.+.. +....+..|++.+++.+++.+..
T Consensus 320 ~~~~~l~~~~~g~~~~~~-~a~~~~l~~~~~~~t~~gl~~s~ 360 (491)
T PRK11010 320 GAAVFFENLCGGMGTAAF-VALLMTLCNKSFSATQFALLSAL 360 (491)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHcCCCCcHHHHHHHHHH
Confidence 222332222222222222 44556788888888888877765
No 78
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.80 E-value=1.8e-18 Score=190.67 Aligned_cols=271 Identities=11% Similarity=-0.009 Sum_probs=190.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHH---HHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhhh
Q 017823 16 QLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILV---RSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSVW 92 (365)
Q Consensus 16 ~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~---~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~~ 92 (365)
...++..+++.+.+.+.++++|+++||+|||+++.. ...+..+..+.....+|+++++++|+++|++.+...+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p---- 127 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGP---- 127 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhch----
Confidence 457888889999999999999999999999997533 2223333333333458999999999999999999999
Q ss_pred hhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH----
Q 017823 93 LFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL---- 168 (365)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f---- 168 (365)
...+++.|++|+++|++++++.+.+.++|.++|+++++++.. ..+|+..|
T Consensus 128 -----------------------~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~---~~~~~~~~~~~~ 181 (1140)
T PRK06814 128 -----------------------IKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATI---SGNFVILVALLM 181 (1140)
T ss_pred -----------------------HHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHh---ccccHHHHHHHH
Confidence 999999999999999999999999999999999999999874 34688775
Q ss_pred ---------------------------------------HhHHHHHHHHHHHHHHhcccccchhhcHHHHHH-HcCCCcc
Q 017823 169 ---------------------------------------KYRLQFVMAILIPFFQHVTRINVISFYAPVLFR-TIKLSES 208 (365)
Q Consensus 169 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~ 208 (365)
..+++.++...+..+...........+.|.+++ ..|.++.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~ 261 (1140)
T PRK06814 182 GIAVLGWLASLFIPKTGNAAPDLKIDRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDEN 261 (1140)
T ss_pred HHHHHHHHHHhhCCCCCCCCCCCeeccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchH
Confidence 001112222232222222233445557788875 4688988
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCC---------CchhhHHHHH
Q 017823 209 TSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGG---------FSIGYAYLIL 279 (365)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 279 (365)
..+ ......+++.+++.++.++++||.++++.+..+.++..+..+.+.+... ...... ......+...
T Consensus 262 ~~g-~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (1140)
T PRK06814 262 VAT-LFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASS--SVPAEPAQLKSILVFLSKRHGWRIL 338 (1140)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhccc--ccccccccccchhhhhcccccHHHH
Confidence 888 8889999999999999999999888777666555555544443333100 000000 0002233344
Q ss_pred HHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 280 VLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+..++++++.+....+. ..+..+..|++.||++.|+.+.+
T Consensus 339 ~~~~~~g~~~~~~~~~~-~~~~~~~~p~~~~G~v~g~~~~~ 378 (1140)
T PRK06814 339 IDLFGLAAAGGLYIVPL-FAALQAWANPAHRARVIAANNVL 378 (1140)
T ss_pred HHHHHHHHHHHHhHHHH-HHHHHhhCCcccceeeeHHHHHH
Confidence 44455555554444444 56668999999999999988776
No 79
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.80 E-value=5.4e-18 Score=171.52 Aligned_cols=261 Identities=18% Similarity=0.166 Sum_probs=176.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhhhhh
Q 017823 15 SQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSVWLF 94 (365)
Q Consensus 15 ~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~~~~ 94 (365)
.....|+.+...++.++..++.|+++|.+|||+.++.+.++..+|+++++.++|...++.+..+.|+|.|....
T Consensus 77 ~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~------ 150 (599)
T PF06609_consen 77 SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL------ 150 (599)
T ss_pred CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH------
Confidence 35778899999999999999999999999999999999999999999999999999999999999999877765
Q ss_pred hhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH------
Q 017823 95 YFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL------ 168 (365)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f------ 168 (365)
....++|..|.|.|.....+...........++.++..+. .+.+|||.|
T Consensus 151 ----------------------~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~---~~~~WRw~~~~~~i~ 205 (599)
T PF06609_consen 151 ----------------------AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFA---AHSGWRWIFYIFIIW 205 (599)
T ss_pred ----------------------HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhc---cCCCcchHHHHHHHH
Confidence 3444799999999988877776666555556677766554 234699988
Q ss_pred --------------------------------------------------------------------------------
Q 017823 169 -------------------------------------------------------------------------------- 168 (365)
Q Consensus 169 -------------------------------------------------------------------------------- 168 (365)
T Consensus 206 ~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv 285 (599)
T PF06609_consen 206 SGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLV 285 (599)
T ss_pred HHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHH
Confidence
Q ss_pred ---------------------HhHHHHHHHHHHHHHHhcccccchhhcHHHH-HHHcCCCcc---hhhHHHHHHHHHHHH
Q 017823 169 ---------------------KYRLQFVMAILIPFFQHVTRINVISFYAPVL-FRTIKLSES---TSLLMSAIVTGSLGT 223 (365)
Q Consensus 169 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~---~~~~~~~~~~~~~~~ 223 (365)
+.+ |.+...++..+.....++....+-|.. ...++.++. ... +.....+++..
T Consensus 286 ~F~~wE~~~~~~~Pl~P~~Lf~~~-r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~-~~s~~~~fg~~ 363 (599)
T PF06609_consen 286 AFVVWEWFGAPKDPLFPHRLFKDR-RGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIG-WISSPVGFGSC 363 (599)
T ss_pred HHHHhhhhccCCCCcCCHHHhccc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceee-hhhhhHHHHHH
Confidence 222 333333333322222233333333443 334444442 345 66778888888
Q ss_pred HHHHHHHHHHhhhCcchH-HHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccc
Q 017823 224 ISTSLSMILADRLGRKVL-FLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPS 302 (365)
Q Consensus 224 ~~~~~~g~l~dr~grr~~-l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (365)
++..+.+.+..|++|-|. ++++.+.+.+....+.... .++.. ..+....+.+++.+..-.+. ....+
T Consensus 364 ~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~---------~~n~~--~~i~~~~l~g~giG~~~~~~-~~~~q 431 (599)
T PF06609_consen 364 AGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVR---------PDNKN--AAIAFLVLAGFGIGGILVPA-IVIAQ 431 (599)
T ss_pred HHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHcc---------CCCcc--hHHHHHHHHHHhHHHHHHHH-HHeeE
Confidence 999999999999887554 4566555555444444331 11111 12233333334433222222 34445
Q ss_pred cCCChhhhhHHHHHHHHH
Q 017823 303 ENFPLEIISAGQIITVAA 320 (365)
Q Consensus 303 e~~p~~~r~~~~~~~~~~ 320 (365)
-..|++..+++.|+..++
T Consensus 432 l~~p~~~ig~a~gL~~s~ 449 (599)
T PF06609_consen 432 LIVPDEDIGTATGLTGSI 449 (599)
T ss_pred eeeCchHHHHHHHHHHHH
Confidence 678999888888877776
No 80
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.79 E-value=8.1e-18 Score=163.91 Aligned_cols=262 Identities=13% Similarity=0.034 Sum_probs=183.9
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh----HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRK----ASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIG 84 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk----~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g 84 (365)
++.+.|..+.|++.+++.++..+++++.|++.||+||| +.+.....+. .......++++|.+++.|++.|++.+
T Consensus 32 ~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l~g~~~~ 109 (382)
T PRK11128 32 KGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGLFNLFFS 109 (382)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHHHHHHHc
Confidence 34677899999999999999999999999999999984 3332222222 22233445889999999999999988
Q ss_pred hhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcch
Q 017823 85 FANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGW 164 (365)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gw 164 (365)
...+ ...++..++ +++|++..+..+...++|..+||++++.+. +++||
T Consensus 110 ~~~~---------------------------~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~---~~~g~ 157 (382)
T PRK11128 110 PLVP---------------------------LTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLV---SWFGE 157 (382)
T ss_pred cccc---------------------------HHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHH---HHcCh
Confidence 8877 666665655 456888888899999999999999999887 44578
Q ss_pred HHHH-----------------H----------------------hHHHHHHHHHHHHHHhcccccchhhcHHHHHHHcCC
Q 017823 165 RISL-----------------K----------------------YRLQFVMAILIPFFQHVTRINVISFYAPVLFRTIKL 205 (365)
Q Consensus 165 r~~f-----------------~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 205 (365)
|..| + .+++..+......+...........+.|.+.++.|.
T Consensus 158 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~ 237 (382)
T PRK11128 158 QAILWILTAGVASMLLGQLLRPTIMPQGESRQQESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGY 237 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHccCCCCCccccccccccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCC
Confidence 8777 0 001112222222222122334455667778888899
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHH
Q 017823 206 SESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVY 285 (365)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (365)
++.+.+ .......+..++...+.+++.||+++|+.+..+.+...+..+..... ++.+..++..++.
T Consensus 238 s~~~~g-~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~l~ 303 (382)
T PRK11128 238 SASTIG-YLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGST-------------TALPWLIVIQILH 303 (382)
T ss_pred CHhHHH-HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhh-------------hhHHHHHHHHHHH
Confidence 988888 77778888899999999999999999999988888777766555433 2344455556666
Q ss_pred HHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 286 KAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 286 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
++++....... ..+..+. |++++++.++..+..
T Consensus 304 g~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~ 336 (382)
T PRK11128 304 CGTFTVCHLAA-MRYIAAR-PGSEVIRLQALYSAL 336 (382)
T ss_pred HHHHHHHHHHH-HHHHHHC-CHhhhHHHHHHHHHH
Confidence 66655443333 3444565 566678888877644
No 81
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.78 E-value=6.1e-18 Score=167.02 Aligned_cols=272 Identities=15% Similarity=0.165 Sum_probs=179.7
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhh----hhhhH-HHHHHHHHHHHHHHHHHHhhh------HHHHHHHH
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRA----FGRKA-SILVRSTAFLAGSALRGAAFN------IYMLIFGR 76 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr----~Grk~-~l~~~~~~~~~~~~~~~~a~~------~~~~~~~r 76 (365)
.+++|+|+.+.|++.++..+..++..|+.|+++|| +|||| .++.+....+++.++..+.++ ...+++.+
T Consensus 27 ~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 106 (437)
T TIGR00792 27 TDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITY 106 (437)
T ss_pred HHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence 35678889999999999999999999999999998 67755 566787888888877776653 45677788
Q ss_pred HHhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccC-CCCCcchhhhHHHHHHHHHHHHHHHHhhhh
Q 017823 77 VLLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMA-PPKNRGAFNIGFQVCVATAVLSANLLNYGT 155 (365)
Q Consensus 77 ~l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~ 155 (365)
++.+++.+...+ ...++..|.. ++++|++..++.+.+..+|.++++.+...+
T Consensus 107 ~~~~~~~~~~~~---------------------------~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l 159 (437)
T TIGR00792 107 ILLGLFYSFVNI---------------------------PYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPL 159 (437)
T ss_pred HHHHHHHHhhcc---------------------------cHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888887776 6677778877 468899999999988888887776654443
Q ss_pred ccc----cCCcchHHHH--------------------H---------------------hHHHHHHHHHHHHHHhccccc
Q 017823 156 QKI----KVGWGWRISL--------------------K---------------------YRLQFVMAILIPFFQHVTRIN 190 (365)
Q Consensus 156 ~~~----~~~~gwr~~f--------------------~---------------------~~~~~~~~~~~~~~~~~~~~~ 190 (365)
... .+..+||..+ + .+++.+.......+.......
T Consensus 160 ~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 239 (437)
T TIGR00792 160 VSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFN 239 (437)
T ss_pred HHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 321 2346898876 0 001111222222222222222
Q ss_pred chhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCC
Q 017823 191 VISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGF 270 (365)
Q Consensus 191 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 270 (365)
....+.+.+.+...-++.... .......+..+++.++.++++||+|||+.+..+..+..++.+.+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~----------- 307 (437)
T TIGR00792 240 IKNGVQVYYFTYVLGDPELFS-YMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFA----------- 307 (437)
T ss_pred HHcchhheeEeeecCChHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-----------
Confidence 333333444432211344445 56667788999999999999999999999988877777666555432
Q ss_pred chhhHHHHHHHHHHHHHhhccccccccccccccCCC-------hhhhhHHHHHHHHH
Q 017823 271 SIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFP-------LEIISAGQIITVAA 320 (365)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p-------~~~r~~~~~~~~~~ 320 (365)
+ +..+...+...+.+++.+.. .+..+.+.+|..| ++.+|++.|+.+..
T Consensus 308 ~-~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 362 (437)
T TIGR00792 308 G-SNLPLILVLIILAGFGQNFV-TGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFV 362 (437)
T ss_pred c-hhHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHH
Confidence 1 12233334444444444433 3444566677755 45678888877766
No 82
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.78 E-value=2.3e-17 Score=163.00 Aligned_cols=264 Identities=8% Similarity=-0.060 Sum_probs=169.3
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGR-KASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Gr-k~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
++.|+|..+.|++.+++.++..+++++.|+++||+|| |+++..+.++..++..+..+.++++.+.+.|++.|++.+...
T Consensus 31 ~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 110 (418)
T TIGR00889 31 KTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTI 110 (418)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHH
Confidence 4567789999999999999999999999999999965 778888888888888888888999999999999999776665
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhccccccee----ec----ccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcccc
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLY----LS----EMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIK 159 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~----e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 159 (365)
+ ...+. .. |......|.+..+. +|..+++.+++.+..
T Consensus 111 ~---------------------------~~~~l~~~~~~~~g~~~~~~~~~~r~~G~------lG~~ig~~l~g~l~~-- 155 (418)
T TIGR00889 111 A---------------------------LTNSISYANLPQAGLDVVTDFPPIRVMGT------IGFIAAMWAVSLLDI-- 155 (418)
T ss_pred H---------------------------HHHHHHHHHHhhcCCCchhcCCCeeeehh------HHHHHHHHHHHHhcc--
Confidence 5 22221 11 22233334444442 344444444443321
Q ss_pred CCcchHHHH-------------------H---h------------------HHHHHHHHHHHHHHhcccccchhhcHHHH
Q 017823 160 VGWGWRISL-------------------K---Y------------------RLQFVMAILIPFFQHVTRINVISFYAPVL 199 (365)
Q Consensus 160 ~~~gwr~~f-------------------~---~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (365)
...|+..+ + . |++.++...+..+...........+.|.+
T Consensus 156 -~~~~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (418)
T TIGR00889 156 -ELSNIQLYITAGSSALLGVFALTLPDIPVAKSTAKMSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGF 234 (418)
T ss_pred -cchhHHHHHHHHHHHHHHHHHhcCCCCCCCccccccCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHH
Confidence 11233111 0 0 00001112222222122223334556777
Q ss_pred HHHcCCCc--------chhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 017823 200 FRTIKLSE--------STSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFS 271 (365)
Q Consensus 200 ~~~~g~~~--------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 271 (365)
+++.|.++ +..+ ....+..+..+++.+..++++||+|||+.+..+.++..+....+.... ..
T Consensus 235 ~~~~g~~~~~~~~~~~~~~g-~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~---------~~ 304 (418)
T TIGR00889 235 LHEFGRNPEFADSFVVKNAS-IWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGD---------PE 304 (418)
T ss_pred HHHhcccccccchhhhhhHH-HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcC---------cc
Confidence 77766554 4446 777888889999999999999999999999999888777765554421 00
Q ss_pred hhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHH
Q 017823 272 IGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVA 319 (365)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 319 (365)
....+...+..++.+.+.+.. .+....+++|.+|++.|++++|+.+.
T Consensus 305 ~~~~~~l~l~~~l~g~~~~~~-~~~~~~~i~~~~p~~~~g~~~g~~~~ 351 (418)
T TIGR00889 305 YFGYALLFLSMIVYGCAFDFF-NISGSVFVEKEVPVHIRASAQGLFTL 351 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 111223334445555554433 23334556899999999999999963
No 83
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.78 E-value=5.3e-17 Score=159.23 Aligned_cols=265 Identities=15% Similarity=0.092 Sum_probs=176.5
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhhH-HHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHhh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAF-----GRKA-SILVRSTAFLAGSALRGAA---FNIYMLIFGRVLLG 80 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~-----Grk~-~l~~~~~~~~~~~~~~~~a---~~~~~~~~~r~l~G 80 (365)
+-|+|.+++|++..+... .+..+++|+++||+ |||| .+..+..+.+++....++. ++++.+.+..++.+
T Consensus 28 ~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~ 105 (402)
T PRK11902 28 VEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVA 105 (402)
T ss_pred HcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHH
Confidence 347889999999777765 68999999999999 8876 6777788887777777776 45788888888888
Q ss_pred cchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccC
Q 017823 81 VGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKV 160 (365)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~ 160 (365)
+..+...+ ...+++.|+.|+|+|++++++...+..+|.++++.++..+.+.
T Consensus 106 ~~~~~~~~---------------------------~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~-- 156 (402)
T PRK11902 106 FLSASQDI---------------------------VFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADR-- 156 (402)
T ss_pred HHHHHHHH---------------------------HHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc--
Confidence 88888888 8889999999999999999999999999999999988877632
Q ss_pred CcchHHHH----------------------H---h---------------HHHHHH-HHHHHHHHhcccccchhhcHHHH
Q 017823 161 GWGWRISL----------------------K---Y---------------RLQFVM-AILIPFFQHVTRINVISFYAPVL 199 (365)
Q Consensus 161 ~~gwr~~f----------------------~---~---------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 199 (365)
.+|||..| + . +++.+. .+..................|.+
T Consensus 157 ~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l 236 (402)
T PRK11902 157 VLGWGNTYLLMAGLMLAGALTTLWAPEPEVPARPPRSLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFL 236 (402)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 14799888 0 0 000011 11111221111111112233445
Q ss_pred HHHcCCCcchhhHHHHHHHH-HHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHH
Q 017823 200 FRTIKLSESTSLLMSAIVTG-SLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLI 278 (365)
Q Consensus 200 ~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (365)
.++.|+++++.+ ......+ ++.+++.++++++.||+|+|+.+..+.....+..+.+..... ..+..+..
T Consensus 237 ~~~~G~~~~~~g-~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~---------~~~~~~~~ 306 (402)
T PRK11902 237 IRGAGFSAGEVG-IVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAV---------TPKHLWTM 306 (402)
T ss_pred HHhcCCCHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh---------cCCcHHHH
Confidence 566899988887 5554444 468899999999999999999887766665555444432210 00112333
Q ss_pred HHHHH----HHHHhhccccccccccccccCCChhhhhHHHHH
Q 017823 279 LVLIC----VYKAGFAFSWGPLRWLVPSENFPLEIISAGQII 316 (365)
Q Consensus 279 ~~~~~----~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~ 316 (365)
..... ..+...+ ...+....+.++.+|.+.++...++
T Consensus 307 ~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (402)
T PRK11902 307 ALAIGIENLCGGMGTA-AFVALLMALCNRSFSATQYALLSAL 347 (402)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHhcCCCCcHHHHHHHHHH
Confidence 33222 2222222 2233344566888888877754433
No 84
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.77 E-value=3.2e-17 Score=165.53 Aligned_cols=262 Identities=15% Similarity=0.142 Sum_probs=199.2
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHhhcchhhhh
Q 017823 13 FDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA-----FNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 13 ~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a-----~~~~~~~~~r~l~G~~~g~~~ 87 (365)
-|+...+++..+..+...+.++++|.++||++|||+++.+..+..+..+..++. .+++.+++.-++.|++.+...
T Consensus 42 ~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~ 121 (524)
T PF05977_consen 42 GSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFN 121 (524)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 457889999999999999999999999999999999999888776655544432 478899999999999999999
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
| +..+++.|..|+++...++++.+...++..++||.+++.+.... |-...
T Consensus 122 P---------------------------A~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~---G~~~~ 171 (524)
T PF05977_consen 122 P---------------------------AWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFF---GAAAA 171 (524)
T ss_pred H---------------------------HHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHH---HHHHH
Confidence 9 99999999999999999999999999999999999988765321 12222
Q ss_pred H------------------------------------------HhHHHHHHHHHHHHHHhcccccchhhcHHHHH-HHcC
Q 017823 168 L------------------------------------------KYRLQFVMAILIPFFQHVTRINVISFYAPVLF-RTIK 204 (365)
Q Consensus 168 f------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g 204 (365)
| +..+.....+.......+ .........|.+. +..|
T Consensus 172 f~inalsfl~~i~~l~~~~~~~~~~~~~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l-~~~a~~aLlPl~a~~~l~ 250 (524)
T PF05977_consen 172 FLINALSFLISILALLRWKPPPPPSSLPRERFFSALREGLRYVRSSPPLRSVLLRSFLFNL-FASAVWALLPLFARDVLG 250 (524)
T ss_pred HHHHHHHHHHHHHHHHHccccccccccchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHH-hhhHHHHhhhHHHHHHhC
Confidence 2 111222222222222212 2233344578877 4578
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHH
Q 017823 205 LSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICV 284 (365)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (365)
.++...+ .+....+++.++|+++.+++.+|+++++.+..+.+..+++.+.+++. ++.+...+..++
T Consensus 251 ~~a~~yG-ll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~-------------~~~~~~~~~l~l 316 (524)
T PF05977_consen 251 GGASGYG-LLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALS-------------PSFWLALIALFL 316 (524)
T ss_pred CcHHHHH-HHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcc-------------hHHHHHHHHHHH
Confidence 8888888 99999999999999999999999999998888888888777777664 334555555566
Q ss_pred HHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 285 YKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.+.+......+. .....+..|++.||++.++....
T Consensus 317 ~G~~~~~~~~~~-~t~~Q~~~P~~~~GRv~si~~~~ 351 (524)
T PF05977_consen 317 AGAAWIIANSSL-NTLVQLSVPDWVRGRVFSIYQMV 351 (524)
T ss_pred HHHHHHHHHHHH-HHHHHHhCCHHHHhHHHHHHHHH
Confidence 666555444444 44558999999999999998877
No 85
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.76 E-value=2.3e-17 Score=161.60 Aligned_cols=265 Identities=12% Similarity=0.116 Sum_probs=191.1
Q ss_pred ccccCCchH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 9 NYSKFDSQL-LTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 9 ~~~~~~~~~-~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
+++|+|+++ .|.+.++++.++++..++.|+++||+|.|+++.++.+.+++..++.+++++++.+.+.|++.|++.|...
T Consensus 54 ~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~ 133 (511)
T TIGR00806 54 TVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI 133 (511)
T ss_pred HHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467777999 9999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
. ...++.+++|+++|+++.++...+..+|.+++++++..+. .+|||..
T Consensus 134 A----------------------------~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~----s~gWr~y 181 (511)
T TIGR00806 134 A----------------------------YSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV----TLGWISY 181 (511)
T ss_pred H----------------------------HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCchhH
Confidence 6 6778899999999999999999999999999999998843 3578876
Q ss_pred H------------------------H------h---------------------------------------------HH
Q 017823 168 L------------------------K------Y---------------------------------------------RL 172 (365)
Q Consensus 168 f------------------------~------~---------------------------------------------~~ 172 (365)
. + . ++
T Consensus 182 ~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n 261 (511)
T TIGR00806 182 STLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRN 261 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcC
Confidence 6 0 0 00
Q ss_pred HHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCc-chhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhH--HHH
Q 017823 173 QFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSE-STSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGG--IQM 249 (365)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~--~~~ 249 (365)
+.++-..++.....+++.-+..|...+.++..-++ +..+ ..-.+..+.+.+..+..|++-.++.+--.+.++. .+.
T Consensus 262 ~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG-~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~ 340 (511)
T TIGR00806 262 PQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNG-AVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQ 340 (511)
T ss_pred cchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCC-HHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHH
Confidence 11222233344445566666667776666653322 2334 5566667778888888898855553322222222 222
Q ss_pred HHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 250 LVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 250 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+..++.+.. .++.|...+..+++...+.+..+....-+ ++....+.-|...|+.+.+
T Consensus 341 ~gll~~m~~-------------t~~Iw~~Y~~yvlf~~~y~flitia~~~i-A~~L~~~~~aLvFGiNtfv 397 (511)
T TIGR00806 341 AGLVFWMSQ-------------SHDIWVLYVTYVLFRGIYQFLVPIATFQI-ASSLSKELCALVFGINTFV 397 (511)
T ss_pred HHHhhhhhc-------------ccchHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcccceEEEEecHHHH
Confidence 222222222 24577777888888887776555444333 4555555556666665555
No 86
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.75 E-value=1.7e-17 Score=166.88 Aligned_cols=266 Identities=18% Similarity=0.183 Sum_probs=208.2
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHHhhcchhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFG-RVLLGVGIGFAN 87 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~-r~l~G~~~g~~~ 87 (365)
++++.+..+.+|+.++..-...+.+|+.+.+.||+|.|.+.+.+..+..+|.++.+|++++|++++. -++.|+|.|+.+
T Consensus 74 ~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~ 153 (509)
T KOG2504|consen 74 DYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIY 153 (509)
T ss_pred HHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhh
Confidence 4556668889999999999999999999999999999999999999999999999999999988885 478899999999
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
. .....+..++ +|+|+.++++...+.++|..+-+.+...+. +..|||..
T Consensus 154 ~---------------------------paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~---~~~G~r~~ 202 (509)
T KOG2504|consen 154 L---------------------------PAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLL---SKYGWRGA 202 (509)
T ss_pred c---------------------------chhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHH---HHhCcHHH
Confidence 9 8888888776 689999999999999999988888887776 44678877
Q ss_pred H-------------------------------------------------------------------------------
Q 017823 168 L------------------------------------------------------------------------------- 168 (365)
Q Consensus 168 f------------------------------------------------------------------------------- 168 (365)
+
T Consensus 203 ~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (509)
T KOG2504|consen 203 LLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSP 282 (509)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccc
Confidence 6
Q ss_pred -----------HhHHHHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 017823 169 -----------KYRLQFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLG 237 (365)
Q Consensus 169 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g 237 (365)
..+.+.++.+.........++.....++|.+.++.+++++++. ...++.++..++++++.|+++|+..
T Consensus 283 ~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa-~l~Siigi~~i~gRi~~G~laD~~~ 361 (509)
T KOG2504|consen 283 LQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAA-FLLSIIGVSDIIGRIILGLLADKPG 361 (509)
T ss_pred hhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhH-HHHHHHHHhhhhhhhhhhhhcCccc
Confidence 0111234444444444455677777888888899999999999 9999999999999999999999988
Q ss_pred cc--hHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHH
Q 017823 238 RK--VLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQI 315 (365)
Q Consensus 238 rr--~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 315 (365)
.+ ....++.+..+++...+.... + .........++++..+ .+..+...+..|+.+.+.-+.+.|
T Consensus 362 ~~~~~~~~~~ll~~gl~~~~~p~~~------------~-~~~l~~~~~~fG~~~g-~~~~l~~~i~~~~~g~~~l~~a~G 427 (509)
T KOG2504|consen 362 IRALVLFLLTLLIAGLARLFLPFAT------------T-YVGLIVFSILFGFCVG-SFSSLTPVILVDLVGLEKLSNAYG 427 (509)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhc------------c-HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcChhhcchHHH
Confidence 43 445555555556554444431 1 2333333334444433 344455556789999999999999
Q ss_pred HHHHH
Q 017823 316 ITVAA 320 (365)
Q Consensus 316 ~~~~~ 320 (365)
+...+
T Consensus 428 l~l~~ 432 (509)
T KOG2504|consen 428 LLLLF 432 (509)
T ss_pred HHHHH
Confidence 88887
No 87
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.75 E-value=2.6e-16 Score=158.42 Aligned_cols=130 Identities=15% Similarity=0.124 Sum_probs=116.0
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHhhhHHH-HHHHHHHhhcchhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRA-FGRKASILVRSTAFLAGSALRGAAFNIYM-LIFGRVLLGVGIGFA 86 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr-~Grk~~l~~~~~~~~~~~~~~~~a~~~~~-~~~~r~l~G~~~g~~ 86 (365)
+++|++.++.+++.+.+.....+..+++|+++|| +||||+++.+..++.+++++++++.+... +.++|+++|+|.|..
T Consensus 43 ~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~ 122 (489)
T PRK10207 43 KQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLF 122 (489)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccc
Confidence 4577789999999999998999999999999999 99999999999999999999999876544 558999999999999
Q ss_pred hhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCC--CcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcch
Q 017823 87 NQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPK--NRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGW 164 (365)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~--~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gw 164 (365)
.+ ....++.|.+|++ +|+++.+++..+.++|..+|+.+++++. +..||
T Consensus 123 ~~---------------------------~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~---~~~gw 172 (489)
T PRK10207 123 KA---------------------------NPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIA---DKFGY 172 (489)
T ss_pred cC---------------------------CHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHH---HhhCh
Confidence 99 8889999999887 4577899999999999999999999988 44579
Q ss_pred HHHH
Q 017823 165 RISL 168 (365)
Q Consensus 165 r~~f 168 (365)
|+.|
T Consensus 173 ~~~F 176 (489)
T PRK10207 173 SVTY 176 (489)
T ss_pred HHHH
Confidence 9988
No 88
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.74 E-value=6.3e-18 Score=174.93 Aligned_cols=221 Identities=15% Similarity=0.128 Sum_probs=173.9
Q ss_pred cCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh-------------------
Q 017823 7 ISNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAF------------------- 67 (365)
Q Consensus 7 ~~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~------------------- 67 (365)
++++++++.++.|++.+.+.++++++.++.++++||+|||+.+.++.+++++++++.++.+
T Consensus 59 iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~ 138 (633)
T TIGR00805 59 IERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLS 138 (633)
T ss_pred hhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccc
Confidence 4567788899999999999999999999999999999999999999999999999988764
Q ss_pred --------------------------------hHHHHHHHHHHhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhccc
Q 017823 68 --------------------------------NIYMLIFGRVLLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQ 115 (365)
Q Consensus 68 --------------------------------~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (365)
.+..++++|+++|+|.+..++
T Consensus 139 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~--------------------------- 191 (633)
T TIGR00805 139 SANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFP--------------------------- 191 (633)
T ss_pred ccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchh---------------------------
Confidence 256778999999999999999
Q ss_pred ccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCC-----------------c--chHHHH--------
Q 017823 116 SVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVG-----------------W--GWRISL-------- 168 (365)
Q Consensus 116 ~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~-----------------~--gwr~~f-------- 168 (365)
...+++.|++|+++|++..++.+.+..+|.++|+++++.+.+.... | +|+..|
T Consensus 192 ~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~ 271 (633)
T TIGR00805 192 LGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVAL 271 (633)
T ss_pred cCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998877643211 1 367666
Q ss_pred -------------H----hH-------------------------------------HHHHHHHHHHHHHhcccccchhh
Q 017823 169 -------------K----YR-------------------------------------LQFVMAILIPFFQHVTRINVISF 194 (365)
Q Consensus 169 -------------~----~~-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 194 (365)
+ .. ++.++...+..+...........
T Consensus 272 l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~ 351 (633)
T TIGR00805 272 LTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYIT 351 (633)
T ss_pred HHHHHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 00112222333333445566777
Q ss_pred cHHHHHH-HcCCCcchhhHHHHHHHHH-HHHHHHHHHHHHHhhhCc--chHHHHhHHHHHHHHHH
Q 017823 195 YAPVLFR-TIKLSESTSLLMSAIVTGS-LGTISTSLSMILADRLGR--KVLFLVGGIQMLVSRVM 255 (365)
Q Consensus 195 ~~~~~~~-~~g~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~dr~gr--r~~l~~~~~~~~i~~~~ 255 (365)
|.|.+++ ++|+++.+++ .......+ +.+++.+++|+++||+++ |+.+..+.+...++.+.
T Consensus 352 ~lP~yl~~~~g~s~~~ag-~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 352 FLPKYLENQYGISSAEAN-FLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHcCCcHHHHH-HHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 8999985 5899999988 66666555 568999999999999984 46666666666665544
No 89
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.73 E-value=2.9e-17 Score=154.57 Aligned_cols=265 Identities=12% Similarity=0.023 Sum_probs=182.7
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhhh
Q 017823 13 FDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSVW 92 (365)
Q Consensus 13 ~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~~ 92 (365)
-+....|.+.|++.+...+.++.+|.++||+|||.++.+|....++...+.+.+.|+..+..+|++.|+..|...+
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v---- 140 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSV---- 140 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHH----
Confidence 3577899999999999999999999999999999999999999999999999999997777779999999998776
Q ss_pred hhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcccc---CCcchHH---
Q 017823 93 LFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIK---VGWGWRI--- 166 (365)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~---~~~gwr~--- 166 (365)
..++++|..++|+|++.++.....+++|.++||.+|+++.... ..+-.-.
T Consensus 141 ------------------------~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~ 196 (451)
T KOG2615|consen 141 ------------------------IRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCL 196 (451)
T ss_pred ------------------------HHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHH
Confidence 7788999999999999999999999999999999999987622 1110000
Q ss_pred --HH------------------------------------------------------HhHH--HHHHHHHHHHHHhccc
Q 017823 167 --SL------------------------------------------------------KYRL--QFVMAILIPFFQHVTR 188 (365)
Q Consensus 167 --~f------------------------------------------------------~~~~--~~~~~~~~~~~~~~~~ 188 (365)
.. +.+. ..+..+....+.....
T Consensus 197 ~v~i~a~~~v~~~~~~lpETL~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l 276 (451)
T KOG2615|consen 197 LVFILAAGDVTFFPWFLPETLPLRKRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLEL 276 (451)
T ss_pred HHHHHHHHHHHHHHHhCCccccchhhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHH
Confidence 00 0001 1111111111211111
Q ss_pred ccchhhcHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhC--cchHHHHhHHHHHHHHHHHHHHHhhhcC
Q 017823 189 INVISFYAPVLF-RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLG--RKVLFLVGGIQMLVSRVMIGSIMADQIG 265 (365)
Q Consensus 189 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--rr~~l~~~~~~~~i~~~~~~~~~~~~~~ 265 (365)
+....++.+.+. ..+|+++.+.+ .+....++.+.+......+..||.+ .+-.+.....++.-..+.+...
T Consensus 277 ~s~~~~t~~~l~~~rfg~ss~~~G-~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~------ 349 (451)
T KOG2615|consen 277 FSGLENTVLFLTHGRFGYSSMQQG-KVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLA------ 349 (451)
T ss_pred HHHHHhhHHHhhcCccCCChhhhe-eeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcc------
Confidence 122222222232 45788888888 6777777777766666666666665 3444444444444444444332
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 266 DHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
...........+..+.-+...+.+ ..+.....|+++||+..|+..+.
T Consensus 350 -------~~~~~l~~~s~l~sf~~A~~vt~L-t~Lv~~~~~~~qrG~~~Gi~~Sl 396 (451)
T KOG2615|consen 350 -------RTPVVLYLGSTLKSFSTASVVTCL-TSLVHKYGPQSQRGTLNGIFRSL 396 (451)
T ss_pred -------ccchhhhHHHHHHHHHHHHhhHHH-HHHHHhcCCcccchHHHHHHHHH
Confidence 122333444444445544444444 45558899999999999999988
No 90
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.72 E-value=2.6e-16 Score=155.19 Aligned_cols=261 Identities=12% Similarity=0.048 Sum_probs=155.1
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH---Hhh-----hHHHHHHHHHHh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRG---AAF-----NIYMLIFGRVLL 79 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~---~a~-----~~~~~~~~r~l~ 79 (365)
++++|+|+.+.|++.+++.++..+++++.|+++||+|||++++.+..+..++..... .++ .+....++++..
T Consensus 38 ~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (420)
T PRK09528 38 HDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYL 117 (420)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345788899999999999999999999999999999999999876666554433211 111 111122233333
Q ss_pred hcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcccc
Q 017823 80 GVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIK 159 (365)
Q Consensus 80 G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~ 159 (365)
|.+.....+ ....+..+ . ++++++..+..+...++|..+++++++.+.+
T Consensus 118 ~~~~~~~~~---------------------------~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-- 166 (420)
T PRK09528 118 GFGFLAGAG---------------------------AIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN-- 166 (420)
T ss_pred hhhhccchh---------------------------hhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh--
Confidence 322222222 22222221 2 3456778888888889999999999887763
Q ss_pred CCcchHHHH----------------------HhH-----------------------HHHHHHHHHHHHHhcccccchhh
Q 017823 160 VGWGWRISL----------------------KYR-----------------------LQFVMAILIPFFQHVTRINVISF 194 (365)
Q Consensus 160 ~~~gwr~~f----------------------~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~ 194 (365)
.+|+..| +.+ ++.++...+..............
T Consensus 167 --~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~ 244 (420)
T PRK09528 167 --INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQ 244 (420)
T ss_pred --cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccchhcccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHH
Confidence 2477666 000 00001111111111111122222
Q ss_pred cHHHHHHH----cCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCC
Q 017823 195 YAPVLFRT----IKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGF 270 (365)
Q Consensus 195 ~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 270 (365)
+.|.++.+ .+.+..+.+ .......+...++.++.+++.||+|||+.+..+..+..+...+..+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~----------- 312 (420)
T PRK09528 245 QFPNFFASFFATPEQGTRVFG-YLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFA----------- 312 (420)
T ss_pred HHHHHHHHHHhccCcchHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhc-----------
Confidence 34554432 244555556 67777788889999999999999999999888887777766665543
Q ss_pred chhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHH
Q 017823 271 SIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQII 316 (365)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~ 316 (365)
++.+.......+.+........ ....+..|.+|++.|++..+.
T Consensus 313 --~~~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~a~~~~~ 355 (420)
T PRK09528 313 --TGPLEVSILKLLHAFEVPFLLV-GVFKYITLNFDVRLSATIYLV 355 (420)
T ss_pred --ccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCccceeeeeee
Confidence 1223333333333333322222 223455788899998876544
No 91
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.70 E-value=2.5e-15 Score=150.94 Aligned_cols=128 Identities=10% Similarity=0.159 Sum_probs=117.7
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhh
Q 017823 11 SKFDSQLLTTFTSSLYIAGLIASLFASSVTRA-FGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQV 89 (365)
Q Consensus 11 ~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr-~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~ 89 (365)
+|+|..+.+++.+.+.++..++++++|+++|| +|||+++..+..+.+++.++.+++++++.+.++|++.|++.|...+
T Consensus 43 lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~- 121 (475)
T TIGR00924 43 LGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKA- 121 (475)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccC-
Confidence 78889999999999999999999999999999 8999999999999999999999999999999999999999999988
Q ss_pred hhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCC---cchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHH
Q 017823 90 SVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKN---RGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRI 166 (365)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~---r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~ 166 (365)
...++++|++|+++ |+++.++.+.+.++|..+|+.++..+. ++.|||.
T Consensus 122 --------------------------~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~---~~~g~~~ 172 (475)
T TIGR00924 122 --------------------------NPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIA---ENYGYHV 172 (475)
T ss_pred --------------------------CHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHH---HhcChHH
Confidence 88888999998754 888999999999999999999998887 3456888
Q ss_pred HH
Q 017823 167 SL 168 (365)
Q Consensus 167 ~f 168 (365)
.|
T Consensus 173 ~f 174 (475)
T TIGR00924 173 GF 174 (475)
T ss_pred HH
Confidence 77
No 92
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.70 E-value=1.7e-15 Score=144.10 Aligned_cols=258 Identities=12% Similarity=0.086 Sum_probs=200.3
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH---HhhhHHHHHHHHHHhhcchh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRG---AAFNIYMLIFGRVLLGVGIG 84 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~---~a~~~~~~~~~r~l~G~~~g 84 (365)
.+.++++..|.+.+...++.++.+++++.|++.+|+|+|+.++++..+.++++.+.. -..++..++.+-++.|.|.+
T Consensus 40 ~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~ 119 (422)
T COG0738 40 KEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIG 119 (422)
T ss_pred HHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhH
Confidence 455677799999999999999999999999999999999999999999999999984 45789999999999999999
Q ss_pred hhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccC----
Q 017823 85 FANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKV---- 160 (365)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~---- 160 (365)
...+ ....++....|+++..+-+...|...++|..++|+++..+.....
T Consensus 120 ~Let---------------------------aaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~ 172 (422)
T COG0738 120 LLET---------------------------AANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTM 172 (422)
T ss_pred HHHh---------------------------ccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhcc
Confidence 9999 999999999999989999999999999999999999887764200
Q ss_pred ------------CcchHHHH---------------------------------------HhHHHHHHHHHHHHHHhcccc
Q 017823 161 ------------GWGWRISL---------------------------------------KYRLQFVMAILIPFFQHVTRI 189 (365)
Q Consensus 161 ------------~~gwr~~f---------------------------------------~~~~~~~~~~~~~~~~~~~~~ 189 (365)
...||.++ ..+++-+....+..+.+....
T Consensus 173 ~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~E 252 (422)
T COG0738 173 SAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAE 252 (422)
T ss_pred CHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccccccchHHHHHhChHHHHHHHHHHHHHhHH
Confidence 01244444 122233333333444445556
Q ss_pred cchhhcHHHHHHH-cCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCC
Q 017823 190 NVISFYAPVLFRT-IKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHG 268 (365)
Q Consensus 190 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 268 (365)
.....|.+.++.+ .|.++.++. ...+....+.++|+.++..+.+|+...|.+....+...+.++......
T Consensus 253 va~gsfl~~y~~~~~g~~~~~aa-~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~-------- 323 (422)
T COG0738 253 VAIGSFLVSYLEELLGLNEQQAA-YYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIG-------- 323 (422)
T ss_pred HHHHHHHHHHHHhcCCccHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhc--------
Confidence 6777788888866 788999988 999999999999999999999999999988887766665555555541
Q ss_pred CCchhhHHHHHHHHHHHHHhhccccccccccccccCCChh
Q 017823 269 GFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLE 308 (365)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 308 (365)
....+......+.+.+..++.. +....+..|.+
T Consensus 324 ------g~v~~~~l~~ig~F~simfPTI-fslal~~l~~~ 356 (422)
T COG0738 324 ------GVVALYALFLIGLFNSIMFPTI-FSLALKNLGEH 356 (422)
T ss_pred ------ChHHHHHHHHHHHHhHHHHHHH-HHHHHhccCcc
Confidence 1233444444455555555444 66667778743
No 93
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.69 E-value=8.8e-16 Score=150.16 Aligned_cols=260 Identities=11% Similarity=0.045 Sum_probs=164.9
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH---Hh-----hhHHHHHHHHHHhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRG---AA-----FNIYMLIFGRVLLG 80 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~---~a-----~~~~~~~~~r~l~G 80 (365)
+++|.|+.+.+++.+++.++..+++++.|+++||+|||+.++.+....+++..... +. +.+..+.+.|++.|
T Consensus 31 ~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 110 (396)
T TIGR00882 31 DVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLG 110 (396)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 45678899999999999999999999999999999999999887666655443221 11 22345566788888
Q ss_pred cchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccC
Q 017823 81 VGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKV 160 (365)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~ 160 (365)
++.+...+ ....+..|.. +++++..+......++|..+++.+++.+.+
T Consensus 111 ~~~~~~~~---------------------------~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~--- 158 (396)
T TIGR00882 111 FVFSAGAG---------------------------AIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS--- 158 (396)
T ss_pred HHhccchh---------------------------hHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc---
Confidence 88887777 5555555543 334456667777778888888888877653
Q ss_pred CcchHHHH---------------------Hh------------------------HHHHHHHHHHHHHHhcccccchhhc
Q 017823 161 GWGWRISL---------------------KY------------------------RLQFVMAILIPFFQHVTRINVISFY 195 (365)
Q Consensus 161 ~~gwr~~f---------------------~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (365)
.+||..| +. +++.++......+.....+.....+
T Consensus 159 -~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~ 237 (396)
T TIGR00882 159 -IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVANALGANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQ 237 (396)
T ss_pred -cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3688777 00 0000111111111111122233334
Q ss_pred HHHHHHHc----CCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 017823 196 APVLFRTI----KLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFS 271 (365)
Q Consensus 196 ~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 271 (365)
.|.++++. +.+.+..+ ....+..+...++....+++.||+|||+.+.++..+..+........
T Consensus 238 ~~~y~~~~~~~~~~~~~~~g-~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~------------ 304 (396)
T TIGR00882 238 FANFFTSFFATPQQGTRVFG-YVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFA------------ 304 (396)
T ss_pred HHHHHHHhccccccchHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhc------------
Confidence 56665443 34444555 67777788888899999999999999999988877777766554432
Q ss_pred hhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHH
Q 017823 272 IGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQII 316 (365)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~ 316 (365)
++.+.......+.+.+...... ....+..|..|++.++++.+.
T Consensus 305 -~~~~~~~~~~~l~g~~~~~~~~-~~~~~~~~~~~~~~~at~~~~ 347 (396)
T TIGR00882 305 -TTALEVVILKMLHAFEVPFLLV-GCFKYITSQFDVRLSATIYLI 347 (396)
T ss_pred -CChHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCcceEEEeehH
Confidence 1233333344444443322111 222344667788887776655
No 94
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.66 E-value=2.2e-16 Score=149.47 Aligned_cols=220 Identities=18% Similarity=0.099 Sum_probs=166.1
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
++.+-+.+++|++..+..+...+.+++.|.+.||+|+|-.+++|.+.+..++++.++.+++++++++|.++|+|.++..+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence 34455588999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCC-cchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKN-RGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~-r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+..+++++.+|+++ |++++|+...+.++|.++||++|+.+.+. .|.+.+
T Consensus 179 ---------------------------sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~---~Gk~aP 228 (464)
T KOG3764|consen 179 ---------------------------SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEF---AGKSAP 228 (464)
T ss_pred ---------------------------hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhh---cCCcCc
Confidence 99999999999875 79999999999999999999999999844 457777
Q ss_pred H------------------------------------HhHHHHHHHHHHHHHHhcccccchhhcHHHHH-HHcCCCcchh
Q 017823 168 L------------------------------------KYRLQFVMAILIPFFQHVTRINVISFYAPVLF-RTIKLSESTS 210 (365)
Q Consensus 168 f------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~ 210 (365)
| ..+++.+..................--.+.++ ++...+.-+.
T Consensus 229 FlVL~~v~Lld~~L~l~vi~p~~~~~~~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~ 308 (464)
T KOG3764|consen 229 FLVLAIVLLLDGALQLLVIEPTEMDPDSTEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEV 308 (464)
T ss_pred HHHHHHHHHHHHHHHHheeCccccCccccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcce
Confidence 7 01112222222111111112222222233333 5555333366
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhC--cchHHHHhHHHHHHHHHHHHHH
Q 017823 211 LLMSAIVTGSLGTISTSLSMILADRLG--RKVLFLVGGIQMLVSRVMIGSI 259 (365)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~g~l~dr~g--rr~~l~~~~~~~~i~~~~~~~~ 259 (365)
+ +......+...+++.+.+.++||++ |......+.+..++++....+.
T Consensus 309 G-~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~ 358 (464)
T KOG3764|consen 309 G-LAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFA 358 (464)
T ss_pred e-eeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhh
Confidence 6 7788888999999999999999999 4333334444444444444443
No 95
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.65 E-value=2.3e-14 Score=134.70 Aligned_cols=221 Identities=19% Similarity=0.193 Sum_probs=188.2
Q ss_pred cCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhh
Q 017823 7 ISNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFA 86 (365)
Q Consensus 7 ~~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~ 86 (365)
+.+++++|.+..|.++++..+...+.+++..++++|+|.++.+..++++.+++.++.... +.+.++.+-.+.|.|.+..
T Consensus 38 Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~gIav~ 116 (395)
T COG2807 38 IRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGAGIAVI 116 (395)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHhhHHHH
Confidence 456778889999999999999999999999999999999999999999999999999888 7888999999999999999
Q ss_pred hhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHH
Q 017823 87 NQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRI 166 (365)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~ 166 (365)
+. ..+..+.|.+| |+-+..++.+.....+|..+++.+...+.+.. .|||.
T Consensus 117 nV---------------------------LLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~--~gW~~ 166 (395)
T COG2807 117 NV---------------------------LLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHS--GGWRG 166 (395)
T ss_pred HH---------------------------hhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh--ccHHH
Confidence 99 99999999995 77899999999999999999999988887554 36888
Q ss_pred HH-----------------------------------HhHHHHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhh
Q 017823 167 SL-----------------------------------KYRLQFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSL 211 (365)
Q Consensus 167 ~f-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 211 (365)
.. .+|.+.-+.+.+.+..+...++....|.|.++.+.|+|+.+++
T Consensus 167 aL~~WAl~allAl~~WlPq~~r~~~~~~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG 246 (395)
T COG2807 167 ALGFWALLALLALLIWLPQALREQAASIATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAG 246 (395)
T ss_pred HHHHHHHHHHHHHHHHhhhcccccccccccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhh
Confidence 77 1222334445555555556778888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhC-cchHHHHhHHHHHHHHHHHHHH
Q 017823 212 LMSAIVTGSLGTISTSLSMILADRLG-RKVLFLVGGIQMLVSRVMIGSI 259 (365)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~g~l~dr~g-rr~~l~~~~~~~~i~~~~~~~~ 259 (365)
...+...+.+.+.++....+.+|.. +|+........+.++.+.+.+.
T Consensus 247 -~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~ 294 (395)
T COG2807 247 -SLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLA 294 (395)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999765 4555556666677777777654
No 96
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.63 E-value=5.4e-14 Score=142.10 Aligned_cols=130 Identities=14% Similarity=0.124 Sum_probs=110.4
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHhhcchhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRA-FGRKASILVRSTAFLAGSALRGAAF-NIYMLIFGRVLLGVGIGFA 86 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr-~Grk~~l~~~~~~~~~~~~~~~~a~-~~~~~~~~r~l~G~~~g~~ 86 (365)
+++|+|.++.+++.+.+........+++|+++|| +|||+.+..+.++..++..++++++ +.+.+.++|++.|++.|..
T Consensus 50 ~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~ 129 (500)
T PRK09584 50 KQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLF 129 (500)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcc
Confidence 4577778888888888776666767899999999 5999999999999999999988874 5677788999999999988
Q ss_pred hhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCC--cchhhhHHHHHHHHHHHHHHHHhhhhccccCCcch
Q 017823 87 NQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKN--RGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGW 164 (365)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~--r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gw 164 (365)
.+ ....++.|++|+++ |+.+.++++.+.++|..++|.+++++. +..||
T Consensus 130 ~~---------------------------~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~---~~~g~ 179 (500)
T PRK09584 130 KA---------------------------NPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLA---AKYGW 179 (500)
T ss_pred cC---------------------------CHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHH---HhhCH
Confidence 88 77888999998654 456788889999999999999999887 44579
Q ss_pred HHHH
Q 017823 165 RISL 168 (365)
Q Consensus 165 r~~f 168 (365)
|+.|
T Consensus 180 ~~~F 183 (500)
T PRK09584 180 SVAF 183 (500)
T ss_pred HHHH
Confidence 9888
No 97
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.61 E-value=2.7e-14 Score=143.34 Aligned_cols=260 Identities=14% Similarity=0.081 Sum_probs=156.7
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHh----hhhhhH-HHHHHHHHHHHHHHHHHHhhh------HHHHHHHHH
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTR----AFGRKA-SILVRSTAFLAGSALRGAAFN------IYMLIFGRV 77 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~d----r~Grk~-~l~~~~~~~~~~~~~~~~a~~------~~~~~~~r~ 77 (365)
+..|+++...|.+..+.-+.-++..|+.|+++| |+|||| .++.+....+++.++....++ +..+.+...
T Consensus 35 ~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~ 114 (473)
T PRK10429 35 DVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYI 114 (473)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHH
Confidence 456888999999999999999999999999999 669844 555677776766555543221 334555566
Q ss_pred HhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccC-CCCCcchhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 78 LLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMA-PPKNRGAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 78 l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
+.+++...... ...++..|.. ++++|.+.+++-..+.++|..+.+.+...+.
T Consensus 115 l~~~~~t~~~i---------------------------p~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~ 167 (473)
T PRK10429 115 LWGMTYTIMDI---------------------------PFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFV 167 (473)
T ss_pred HHHHHHHHHcc---------------------------hHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66777777777 7777889988 5889999888866666666544443332211
Q ss_pred ----cccCCcchHHHH-----------------------------------------H---hHHHHHHHHHHHHHHhccc
Q 017823 157 ----KIKVGWGWRISL-----------------------------------------K---YRLQFVMAILIPFFQHVTR 188 (365)
Q Consensus 157 ----~~~~~~gwr~~f-----------------------------------------~---~~~~~~~~~~~~~~~~~~~ 188 (365)
...+..+|+... + .++++...+...++. ...
T Consensus 168 ~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~-~~~ 246 (473)
T PRK10429 168 NYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAEGSHLTLKDIVALIYKNDQLSCLLGMALAY-NIA 246 (473)
T ss_pred HHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccccccccCCCHHHHHHHHhcCHHHHHHHHHHHHH-HHH
Confidence 011112344332 0 112222222222222 223
Q ss_pred ccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCC
Q 017823 189 INVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHG 268 (365)
Q Consensus 189 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 268 (365)
......+.+++.+....+++... .......+..+++.++.++++||+|+|+.+..+..+..++.+.+......
T Consensus 247 ~~~~~~~~~y~~~y~~~~~~~~~-~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~------ 319 (473)
T PRK10429 247 SNIINGFAIYYFTYVIGDADLFP-YYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLA------ 319 (473)
T ss_pred HHHHhhheeeEEEEECCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhcc------
Confidence 33333344444444333444444 55566668889999999999999999999988777666555544332100
Q ss_pred CCchhhHHHHHHHHHHHHHhhccccccccccccccCCC
Q 017823 269 GFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFP 306 (365)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 306 (365)
.+...+..++...+.+.+.+..+ +..+.+.+|..|
T Consensus 320 --~~~~~~~~~i~~~l~g~~~~~~~-~~~~am~ad~id 354 (473)
T PRK10429 320 --APHNALLIVIAGILLNIGTALFW-VLQVIMVADTVD 354 (473)
T ss_pred --CchhHHHHHHHHHHHHHHHHHHH-HHHHHHHhhhhh
Confidence 11223344444444555554433 444566678755
No 98
>PRK09669 putative symporter YagG; Provisional
Probab=99.60 E-value=2.6e-14 Score=142.13 Aligned_cols=259 Identities=12% Similarity=0.055 Sum_probs=156.5
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhh----hhhhHH-HHHHHHHHHHHHHHHHHhhh------HHHHHHHH
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRA----FGRKAS-ILVRSTAFLAGSALRGAAFN------IYMLIFGR 76 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr----~Grk~~-l~~~~~~~~~~~~~~~~a~~------~~~~~~~r 76 (365)
++.+|+|+.+.|.+.++..+..++..|+.|+++|| +||||. ++.+....+++.++....++ ++.+.+..
T Consensus 37 t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~ 116 (444)
T PRK09669 37 TDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTY 116 (444)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence 35678889999999999999999999999999999 777555 55666667666655544432 45556666
Q ss_pred HHhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccC-CCCCcchhhhHHHHHHHHHHHHHHHHhhhh
Q 017823 77 VLLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMA-PPKNRGAFNIGFQVCVATAVLSANLLNYGT 155 (365)
Q Consensus 77 ~l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~ 155 (365)
.+.+.+...... ...++..|+. ++++|.+..++...+..+|..+++.+...+
T Consensus 117 ~l~~~~~t~~~i---------------------------p~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl 169 (444)
T PRK09669 117 ILLSLVYTAINV---------------------------PYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPL 169 (444)
T ss_pred HHHHHHHHhhcc---------------------------hHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666766666655 5667788887 457899988888888888877776554332
Q ss_pred cc----ccCCcchHHHH--------------------------------------HhHHHHHHHHHHHHHHhcccccchh
Q 017823 156 QK----IKVGWGWRISL--------------------------------------KYRLQFVMAILIPFFQHVTRINVIS 193 (365)
Q Consensus 156 ~~----~~~~~gwr~~f--------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (365)
.. .....+|+..+ ..+++.+.......+..........
T Consensus 170 ~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~ 249 (444)
T PRK09669 170 VDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEVDNSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRG 249 (444)
T ss_pred HHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCCcCCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHh
Confidence 21 11234677655 0011111222221111111111112
Q ss_pred hcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchh
Q 017823 194 FYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIG 273 (365)
Q Consensus 194 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 273 (365)
...+++.+..--+++... .......+..+++.++.++++||+|+|+.+..+.....+..+.+... +.+
T Consensus 250 ~~~~y~~~~~~~~~~~~~-~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~-----------~~~ 317 (444)
T PRK09669 250 GATLYYVNYVLLRPDLAT-LFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFI-----------PPS 317 (444)
T ss_pred hhhheeeeeecCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHh-----------Ccc
Confidence 222222222211222333 44555567778888999999999999999887766555433333222 112
Q ss_pred hHHHHHHHHHHHHHhhccccccccccccccCCC
Q 017823 274 YAYLILVLICVYKAGFAFSWGPLRWLVPSENFP 306 (365)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 306 (365)
+.+...+...+.+.+.+. ..+..+.+.+|..+
T Consensus 318 ~~~~~~~~~~i~g~~~~~-~~~~~~am~ad~~d 349 (444)
T PRK09669 318 NVWLIFALNILFNFIQNL-TTPLQWSMFSDVVD 349 (444)
T ss_pred hHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhh
Confidence 233344444555555543 34566777788876
No 99
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.60 E-value=6.4e-14 Score=136.71 Aligned_cols=272 Identities=7% Similarity=-0.122 Sum_probs=165.2
Q ss_pred cccCCchHHHHH--HHHHHHHHHHHHHHH-HHHHhhhhhhHHHHHHHHHH-HHHHHHHH---Hhhh-HHHHHHHHHHhhc
Q 017823 10 YSKFDSQLLTTF--TSSLYIAGLIASLFA-SSVTRAFGRKASILVRSTAF-LAGSALRG---AAFN-IYMLIFGRVLLGV 81 (365)
Q Consensus 10 ~~~~~~~~~~~~--~s~~~i~~~i~~~~~-g~l~dr~Grk~~l~~~~~~~-~~~~~~~~---~a~~-~~~~~~~r~l~G~ 81 (365)
+.|.|.+++|.+ .++..+...+.+|+. ++..||+||||..++...+. .......+ ...+ ...++..-++.++
T Consensus 30 ~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (390)
T TIGR02718 30 EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASL 109 (390)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHH
Confidence 447779999997 466788888888888 45799999999975555332 21122222 1222 3333444455555
Q ss_pred chhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCC
Q 017823 82 GIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVG 161 (365)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~ 161 (365)
..+...+ ....+..|..++++++...+....+..+|.++|+.....+. +.
T Consensus 110 ~~a~~d~---------------------------~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~---~~ 159 (390)
T TIGR02718 110 ASATQDI---------------------------ATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLF---GK 159 (390)
T ss_pred HHHHHHH---------------------------HHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH---HH
Confidence 5666666 66667788888888898888888888999999998877776 44
Q ss_pred cchHHHH-------------------H---h---------------HHHHHHHHHHHHHHhcccccchhhcHHHHHHHcC
Q 017823 162 WGWRISL-------------------K---Y---------------RLQFVMAILIPFFQHVTRINVISFYAPVLFRTIK 204 (365)
Q Consensus 162 ~gwr~~f-------------------~---~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 204 (365)
.|||..| + . |++.........+...........+.+.++++.|
T Consensus 160 ~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G 239 (390)
T TIGR02718 160 FGQRPAFLLVACVPLASLVCVLWLKDRAVASPEAPLARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAG 239 (390)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHcCCCCcCccccchhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcC
Confidence 5799887 0 0 0011122222222222333444556777788889
Q ss_pred CCcchhhHHHHHHHH-HHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHH
Q 017823 205 LSESTSLLMSAIVTG-SLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLIC 283 (365)
Q Consensus 205 ~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (365)
+++++.+ ......+ ...+++..+.+++.||+|+|+.+..+.....+..+........ . .............
T Consensus 240 ~s~~~ig-~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~ 311 (390)
T TIGR02718 240 WPLEWIG-RLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAF------W-LAPGIAVAWSCSA 311 (390)
T ss_pred CCHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHc------c-cCCcHHHHHHHHH
Confidence 9999988 6666655 4666788999999999999999887766553333222221100 0 0011122222222
Q ss_pred HHHHhhccccccccccccccCCCh-hhhhHHHHHHHHH
Q 017823 284 VYKAGFAFSWGPLRWLVPSENFPL-EIISAGQIITVAA 320 (365)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~~ 320 (365)
+..+..+...... .....+..++ +.+++.+++.++.
T Consensus 312 ~~~~~~g~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~ 348 (390)
T TIGR02718 312 FGSLITGITSVAI-YTAFMRFAGDGDQAGTDVTAVQST 348 (390)
T ss_pred HHHHHHHHHHHHH-HHHHHHHhCcccchHHHHHHHHHH
Confidence 2222333333333 2232344554 8889999988877
No 100
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.59 E-value=2.1e-13 Score=133.86 Aligned_cols=273 Identities=14% Similarity=0.021 Sum_probs=176.7
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFG-RKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~G-rk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
+.|+|..|+|.+.+...+...++++++|.++||++ +|+.+.+..++.++........++++.++..-++..+......|
T Consensus 31 ~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~p 110 (400)
T PF03825_consen 31 SRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFSPTMP 110 (400)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHccHHH
Confidence 45788999999999999999999999999999986 57777777777777777777788898888888888877777666
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCC--CCcchhhhHHHHHHHHHHHH-HH----------------
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPP--KNRGAFNIGFQVCVATAVLS-AN---------------- 149 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--~~r~~~~~~~~~~~~~g~~i-~~---------------- 149 (365)
...++..+...+ ++-|+.=.+-..++.++... +.
T Consensus 111 ---------------------------l~dsi~~~~~~~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T PF03825_consen 111 ---------------------------LSDSIALSYLGDRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFY 163 (400)
T ss_pred ---------------------------HHHHHHHHHcccccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHH
Confidence 555555444432 22222222222222222111 00
Q ss_pred -------HHhh---hhcccc----CC-----cchHHHH-HhHHHHHHHHHHHHHHhcccccchhhcHHHHHHHcC-CCcc
Q 017823 150 -------LLNY---GTQKIK----VG-----WGWRISL-KYRLQFVMAILIPFFQHVTRINVISFYAPVLFRTIK-LSES 208 (365)
Q Consensus 150 -------~~~~---~~~~~~----~~-----~gwr~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~ 208 (365)
+++. .+.+.. .. ..++..+ ..|++.....++..+...........|.+.++++.| .+.+
T Consensus 164 i~~~~~~ll~~~~l~lp~~~~~~~~~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~ 243 (400)
T PF03825_consen 164 IAAILSLLLAGFALFLPKTPPKRSAKESVKKLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGS 243 (400)
T ss_pred HHHHHHHHHHHHHHhCCCCccccccCCCcccccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhh
Confidence 0000 001110 00 0111111 111122223333333334456777788899999988 7777
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHH-HHHHHHHHHHH
Q 017823 209 TSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAY-LILVLICVYKA 287 (365)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 287 (365)
..+ ....+..+.+++.-...+++.+|+|.|+++.++.+..++-..++.... .+....+ .......+.+.
T Consensus 244 ~~g-~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~---------~~~~~~~~~~~l~q~lhG~ 313 (400)
T PF03825_consen 244 TIG-ILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFS---------DPWPFIVALQLLGQLLHGL 313 (400)
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhc---------CCcHHHHHHHHHHHhhhhH
Confidence 777 677788889999999999999999999999999998888887777651 0111111 11222345677
Q ss_pred hhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 288 GFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 288 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.++..+... ..++.|..|++.|+++|++.++.
T Consensus 314 tf~~~~~a~-~~yi~~~~p~~~~at~Q~l~~~~ 345 (400)
T PF03825_consen 314 TFGLFHAAS-VRYIDRIAPPELRATAQGLYSAL 345 (400)
T ss_pred HHHHHHHHH-HHHHHHhCCccchHHHHHHHHHH
Confidence 766555443 45668999999999999998877
No 101
>PTZ00207 hypothetical protein; Provisional
Probab=99.59 E-value=1e-13 Score=141.18 Aligned_cols=119 Identities=17% Similarity=0.053 Sum_probs=101.7
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh------hhHHHHHHHHHHhhc
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA------FNIYMLIFGRVLLGV 81 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a------~~~~~~~~~r~l~G~ 81 (365)
.+++|+|.++.+++.+.. ......+++.|++.||+|||+++.++.+++.++.++++++ ++++.+.+.|++.|+
T Consensus 54 ~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~ 132 (591)
T PTZ00207 54 QARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTL 132 (591)
T ss_pred HHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHH
Confidence 456777799999998774 4455678889999999999999999999999999999998 689999999999999
Q ss_pred chhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHH-Hhhhh
Q 017823 82 GIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANL-LNYGT 155 (365)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~-~~~~~ 155 (365)
|.+...+ .....+.+++| ++||++.++...+.++|..+.+. ...++
T Consensus 133 G~~~~~~---------------------------~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 133 GCMLFDL---------------------------GAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred HHHHHHH---------------------------HHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888 77788899986 78999999999999999976444 44443
No 102
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.58 E-value=3.4e-13 Score=134.49 Aligned_cols=282 Identities=11% Similarity=0.043 Sum_probs=181.8
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHh----hhhhhHHHHHH-HHHHHHHHHHHHHhhhHH--------------
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTR----AFGRKASILVR-STAFLAGSALRGAAFNIY-------------- 70 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~d----r~Grk~~l~~~-~~~~~~~~~~~~~a~~~~-------------- 70 (365)
++|.++.+.+++..+..+...+.+|+.|+++| |+||||.+++. .....++..+.+++++.+
T Consensus 33 ~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~ 112 (477)
T TIGR01301 33 ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPR 112 (477)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhH
Confidence 46778999999999999999999999999999 59999998774 666666667777766643
Q ss_pred ---HHHHHHHHhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCc--chhhhHHHHHHHHHH
Q 017823 71 ---MLIFGRVLLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNR--GAFNIGFQVCVATAV 145 (365)
Q Consensus 71 ---~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r--~~~~~~~~~~~~~g~ 145 (365)
.++++-.+..++.....+ ...+++.|..|+++| +.++++.+...++|.
T Consensus 113 ~i~~~~i~~~lld~~~n~~~~---------------------------p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ 165 (477)
T TIGR01301 113 AIIVFVVGFWILDVANNMLQG---------------------------PCRAFLADLTGGDARRTRIANAYFSFFMAIGN 165 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---------------------------HHHHhcccccCchhHHHHHHHHHHHHHHHHHH
Confidence 223333344446666666 778899999998865 579999999999999
Q ss_pred HHHHHHhhhhc--ccc--------C--CcchHHHH---------------------------------------------
Q 017823 146 LSANLLNYGTQ--KIK--------V--GWGWRISL--------------------------------------------- 168 (365)
Q Consensus 146 ~i~~~~~~~~~--~~~--------~--~~gwr~~f--------------------------------------------- 168 (365)
++|+.+++... +.. . ..+.|..|
T Consensus 166 ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (477)
T TIGR01301 166 VLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAF 245 (477)
T ss_pred HHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhh
Confidence 99999887541 100 0 01233333
Q ss_pred ---------HhHHHHHHHHHHHHHHhcccccchhhcHHHHHH-H-cCCCcc------hh---hHHHHHHHHHHHHHHHHH
Q 017823 169 ---------KYRLQFVMAILIPFFQHVTRINVISFYAPVLFR-T-IKLSES------TS---LLMSAIVTGSLGTISTSL 228 (365)
Q Consensus 169 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~g~~~~------~~---~~~~~~~~~~~~~~~~~~ 228 (365)
...+.+...+.+.++. ..+......|.+.+.. + ++-++. +. +.+......+...+.+++
T Consensus 246 ~~~i~~~~~~mP~~m~~l~~vqffs-W~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~ 324 (477)
T TIGR01301 246 FGELFGAFKYLPRPVWILLLVTCLN-WIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIG 324 (477)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHH-HHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112233334444444 4455556666666653 2 332221 11 213444555555667777
Q ss_pred HHHHHhhhCc-chHHHHhHHHHHHHHHHHHHHHhhhcC--C---C-C--CCchhhHHHHHHHHHHHHHhhcccccccccc
Q 017823 229 SMILADRLGR-KVLFLVGGIQMLVSRVMIGSIMADQIG--D---H-G--GFSIGYAYLILVLICVYKAGFAFSWGPLRWL 299 (365)
Q Consensus 229 ~g~l~dr~gr-r~~l~~~~~~~~i~~~~~~~~~~~~~~--~---~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (365)
..++.+|+|+ |+....+.++.++++....+....... . + . ..+....+..++.....+..++.. ..+|++
T Consensus 325 l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~-~siPfa 403 (477)
T TIGR01301 325 MEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAIT-YSIPFA 403 (477)
T ss_pred HHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHH-HHHhHH
Confidence 7888999985 677788888888888777765321100 0 0 0 011111355566666666666543 457788
Q ss_pred ccccCCChh--hhhHHHHHHHHH
Q 017823 300 VPSENFPLE--IISAGQIITVAA 320 (365)
Q Consensus 300 ~~~e~~p~~--~r~~~~~~~~~~ 320 (365)
++++..|++ ..|..+|+.|.+
T Consensus 404 l~s~~~~~~~~~~G~~mgilN~~ 426 (477)
T TIGR01301 404 LASIRSSNLGAGQGLSMGVLNLA 426 (477)
T ss_pred HHHHHccccCCCCcchhhHHHHH
Confidence 889999954 558899999888
No 103
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.56 E-value=1.6e-13 Score=135.79 Aligned_cols=258 Identities=14% Similarity=0.186 Sum_probs=186.5
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHh----hhhhhHHH-HHHHHHHHHHHHHHHHh-h-------hHHHHHHH
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTR----AFGRKASI-LVRSTAFLAGSALRGAA-F-------NIYMLIFG 75 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~d----r~Grk~~l-~~~~~~~~~~~~~~~~a-~-------~~~~~~~~ 75 (365)
+..|+++...|.+..+.-+..++..|+.|.++| |+||||.. +.+....+++.++.... + ....+.+.
T Consensus 30 ~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~ 109 (428)
T PF13347_consen 30 DVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVF 109 (428)
T ss_pred HHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHH
Confidence 456888999999999999999999999999999 89987776 45777777777776655 3 22345666
Q ss_pred HHHhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCC-CCCcchhhhHHHHHHHHHHHHHHHHhhh
Q 017823 76 RVLLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAP-PKNRGAFNIGFQVCVATAVLSANLLNYG 154 (365)
Q Consensus 76 r~l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~r~~~~~~~~~~~~~g~~i~~~~~~~ 154 (365)
.++..++...... ...++..|..+ +++|.+..+.-+.+..+|.++...+...
T Consensus 110 ~~l~~~~~t~~~i---------------------------~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~ 162 (428)
T PF13347_consen 110 YILFDIAYTFVQI---------------------------PYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPI 162 (428)
T ss_pred HHHHHHhhhhccC---------------------------chhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhh
Confidence 7777888887777 78888999997 4689999999999999998766666655
Q ss_pred hccccC---C-cchHHHH-----------------------------------------HhHHHHHHHHHHHHHHhcccc
Q 017823 155 TQKIKV---G-WGWRISL-----------------------------------------KYRLQFVMAILIPFFQHVTRI 189 (365)
Q Consensus 155 ~~~~~~---~-~gwr~~f-----------------------------------------~~~~~~~~~~~~~~~~~~~~~ 189 (365)
+.+..+ . .+|+... ...|++.......++. ..+.
T Consensus 163 l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~-~~~~ 241 (428)
T PF13347_consen 163 LVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKKISLRDSLRSLFRNRPFRILLLAFFLQ-WLAF 241 (428)
T ss_pred hhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccccccccccccccccchhhhcccchHHHHHHHHHHH-Hhhh
Confidence 543222 1 2687776 1223333333333333 3344
Q ss_pred cchhhcHHHHHHHc-CCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCC
Q 017823 190 NVISFYAPVLFRTI-KLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHG 268 (365)
Q Consensus 190 ~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 268 (365)
.......+++.+.. |.+ +... .......+..+++.++.++++||+|+|+.+..+..+.+++.+.+.+..
T Consensus 242 ~~~~~~~~y~~~~vl~~~-~~~~-~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~-------- 311 (428)
T PF13347_consen 242 ALMNTFLPYYFTYVLGNE-GLIS-IFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLG-------- 311 (428)
T ss_pred hhhhhHHHHHHHHHhcCc-hhhH-HHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHH--------
Confidence 55555666666553 444 4455 667778889999999999999999999999999999988888877762
Q ss_pred CCchhhHHHHHHHHHHHHHhhccccccccccccccCCChh
Q 017823 269 GFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLE 308 (365)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 308 (365)
.++.+...+...+.+.+.+..+ ..++.+.+|..+.+
T Consensus 312 ---~~~~~~~~i~~~l~gi~~~~~~-~~~~a~~ad~id~~ 347 (428)
T PF13347_consen 312 ---PGSPWLVLILFILAGIGYGAFF-VIPWAMLADVIDYD 347 (428)
T ss_pred ---hhhHHHHHHHHHHhHhhhcccc-cccccccccchhhH
Confidence 1345566666666677766544 55677778988743
No 104
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.54 E-value=2e-12 Score=129.46 Aligned_cols=271 Identities=17% Similarity=0.113 Sum_probs=183.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHH-HHHHHHHHHHHHHHh--hhHHHHHHHHHHhhcchhhhhhhhhh
Q 017823 16 QLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILV-RSTAFLAGSALRGAA--FNIYMLIFGRVLLGVGIGFANQVSVW 92 (365)
Q Consensus 16 ~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~-~~~~~~~~~~~~~~a--~~~~~~~~~r~l~G~~~g~~~~~~~~ 92 (365)
+..++..++..+..++..|+.|.++|+-|+||.++. ...+..+.+....+. .+++...+.-++.-++.+....
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~v---- 145 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNV---- 145 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHH----
Confidence 456788889999999999999999999987776655 445555666666664 3344444555555567777777
Q ss_pred hhhhcccccchhhhhHHHhhcccccceeecccCCCCCc--------------------------chhhhHHHHHHHHHHH
Q 017823 93 LFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNR--------------------------GAFNIGFQVCVATAVL 146 (365)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r--------------------------~~~~~~~~~~~~~g~~ 146 (365)
...+++.|..+++++ ++.++.-.....+|.+
T Consensus 146 -----------------------fyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~ 202 (477)
T PF11700_consen 146 -----------------------FYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGL 202 (477)
T ss_pred -----------------------HHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHH
Confidence 778889999999888 9999998888888888
Q ss_pred HHHHHhhhhccccC-----CcchHHHH-----------------------------------------------HhHHHH
Q 017823 147 SANLLNYGTQKIKV-----GWGWRISL-----------------------------------------------KYRLQF 174 (365)
Q Consensus 147 i~~~~~~~~~~~~~-----~~gwr~~f-----------------------------------------------~~~~~~ 174 (365)
+.-.+...+....+ .+.-|..+ ..+.+.
T Consensus 203 v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~~~~~~ 282 (477)
T PF11700_consen 203 VALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEIRKLRQ 282 (477)
T ss_pred HHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhChH
Confidence 87776655432211 12233333 112233
Q ss_pred HHHHHHHHHHhcccccchhhcHHHHHH-HcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcc--hHHHHhHHHHHH
Q 017823 175 VMAILIPFFQHVTRINVISFYAPVLFR-TIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRK--VLFLVGGIQMLV 251 (365)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr--~~l~~~~~~~~i 251 (365)
....++..+....+.+.+......+.+ ++|++..+.. .......+.+++|+++.+++.||+|.| +.+..+.+...+
T Consensus 283 ~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~-~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~ 361 (477)
T PF11700_consen 283 LFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLI-VFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWII 361 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHH
Confidence 444455555545677777777777774 7899999988 899999999999999999999999999 776666555422
Q ss_pred HHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 252 SRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
..+. +....... .......+...+...+.+.+.+. ..+..-.+.+|+.|+++.+...|+....
T Consensus 362 i~~~-g~~G~~~~----~~g~~~~~~f~~~a~~~G~~~G~-~qs~sRs~~~~LiP~g~e~efFgly~i~ 424 (477)
T PF11700_consen 362 IPLY-GLFGFWPS----FFGLKSPWEFWVLAVLIGLFMGG-IQSASRSLFSRLIPPGREAEFFGLYAIT 424 (477)
T ss_pred HHHH-HHHHhhhc----ccCcccHHHHHHHHHHHHHHhhh-HHHHHHHHHHHhCCCchhhHHHHHHHHH
Confidence 2222 11100000 11113344455555555555543 3445556669999999999999998887
No 105
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.54 E-value=1.2e-12 Score=131.11 Aligned_cols=130 Identities=15% Similarity=0.215 Sum_probs=107.0
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHhhcchhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAF-GRKASILVRSTAFLAGSALRGAAF-NIYMLIFGRVLLGVGIGFA 86 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~-Grk~~l~~~~~~~~~~~~~~~~a~-~~~~~~~~r~l~G~~~g~~ 86 (365)
+++|+++.+.+.+.+.+.....++.+++|+++||+ ||||+++.+..+..++.++.+..+ +...+.++..+.++|.|..
T Consensus 38 ~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~ 117 (493)
T PRK15462 38 NQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLF 117 (493)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccc
Confidence 35678899999999999999999999999999999 999999999999999987766543 2233444444555666666
Q ss_pred hhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCC--CcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcch
Q 017823 87 NQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPK--NRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGW 164 (365)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~--~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gw 164 (365)
.+ ...+++.|.+|++ +|....++...+.++|..++|.+.+.+. +..||
T Consensus 118 ~~---------------------------~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~---~~~Gw 167 (493)
T PRK15462 118 KS---------------------------NVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQ---EEYSW 167 (493)
T ss_pred cc---------------------------cHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHH---hhhCh
Confidence 66 6677889999876 6999999999999999999999999987 44679
Q ss_pred HHHH
Q 017823 165 RISL 168 (365)
Q Consensus 165 r~~f 168 (365)
+..|
T Consensus 168 ~~~F 171 (493)
T PRK15462 168 AMGF 171 (493)
T ss_pred HHHH
Confidence 9888
No 106
>PRK11462 putative transporter; Provisional
Probab=99.51 E-value=1.4e-12 Score=130.52 Aligned_cols=215 Identities=10% Similarity=-0.016 Sum_probs=137.3
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhh----hhhhHHHH-HHHHHHHHHHHHHHHhhh------HHHHHHHHH
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRA----FGRKASIL-VRSTAFLAGSALRGAAFN------IYMLIFGRV 77 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr----~Grk~~l~-~~~~~~~~~~~~~~~a~~------~~~~~~~r~ 77 (365)
+..|+++...|.+..+.-+--++.-|+.|+++|| +||||..+ .+....+++.++.-..++ +..+.+.-.
T Consensus 38 ~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~ 117 (460)
T PRK11462 38 DIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYT 117 (460)
T ss_pred HhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHH
Confidence 4678889999999999999999999999999996 78876654 566667776665544442 344555666
Q ss_pred HhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCC-CCCcchhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 78 LLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAP-PKNRGAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 78 l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
+..++...... ...++..|..+ +++|.+..++...+..+|..+++.+...+.
T Consensus 118 ~~~~~~t~~~i---------------------------py~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv 170 (460)
T PRK11462 118 LLTLLYTVVNI---------------------------PYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLV 170 (460)
T ss_pred HHHHHHHHHhc---------------------------cHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777777776 67777888877 678999999999998888877766654433
Q ss_pred ccc----CCcchHHHH-------------------------------------HhHHHHHHHHHHHHHHhcccccchhhc
Q 017823 157 KIK----VGWGWRISL-------------------------------------KYRLQFVMAILIPFFQHVTRINVISFY 195 (365)
Q Consensus 157 ~~~----~~~gwr~~f-------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (365)
... ...+|+... ..+++.+..+....+............
T Consensus 171 ~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~ 250 (460)
T PRK11462 171 NLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGA 250 (460)
T ss_pred HHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCccCCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhH
Confidence 211 113566544 001111222221111112222222222
Q ss_pred HHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHH
Q 017823 196 APVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLV 251 (365)
Q Consensus 196 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i 251 (365)
..++.+...-+++... .......+..+++.+++++++||+++|+....+.....+
T Consensus 251 ~~y~~~y~~g~~~~~~-~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~ 305 (460)
T PRK11462 251 MMYYVTWILGTPEVFV-AFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAV 305 (460)
T ss_pred hhhhhhhhcCChHHHH-HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 2333332222233333 456677788899999999999999999887655444333
No 107
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.50 E-value=2.9e-13 Score=135.71 Aligned_cols=274 Identities=13% Similarity=-0.001 Sum_probs=178.1
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHH-HHHHHHHHhhhH-HHHHHHHHHhhc
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFG-----RKASILVRSTAFL-AGSALRGAAFNI-YMLIFGRVLLGV 81 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~G-----rk~~l~~~~~~~~-~~~~~~~~a~~~-~~~~~~r~l~G~ 81 (365)
+++|+|+++++...+...+...+-.+ +|.++||++ ||+.++++.++.. +.....+..++. ....+.+++.++
T Consensus 54 ~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~ 132 (468)
T TIGR00788 54 DDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAAL 132 (468)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH
Confidence 45677799999999999999999666 999999998 7777777776663 333333333443 344448889999
Q ss_pred chhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHH---HHHHHHHHHHHHHHhhhhccc
Q 017823 82 GIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGF---QVCVATAVLSANLLNYGTQKI 158 (365)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~---~~~~~~g~~i~~~~~~~~~~~ 158 (365)
+.+...+ ....+..|..+ +++....+.. ....++|.++++.+++.+.
T Consensus 133 ~~a~~dv---------------------------~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~-- 182 (468)
T TIGR00788 133 AKALYDV---------------------------LVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLL-- 182 (468)
T ss_pred HHHHHHH---------------------------hHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH--
Confidence 9999988 88999999988 5554433333 3334578888888887776
Q ss_pred cCCcchHHHH-----------------HhH----------------------------------------HHHHHHHHHH
Q 017823 159 KVGWGWRISL-----------------KYR----------------------------------------LQFVMAILIP 181 (365)
Q Consensus 159 ~~~~gwr~~f-----------------~~~----------------------------------------~~~~~~~~~~ 181 (365)
+..+||..| +.+ +.....+...
T Consensus 183 -~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fi 261 (468)
T TIGR00788 183 -DKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFI 261 (468)
T ss_pred -HhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHH
Confidence 334577666 000 0011111111
Q ss_pred HHHhcccccch-hhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHH
Q 017823 182 FFQHVTRINVI-SFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIM 260 (365)
Q Consensus 182 ~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~ 260 (365)
++......... ..|. ...+..|++++..+ ......+++.+++..+.+++.+|++.|+.+.++.++..++.+......
T Consensus 262 fl~~~~~~~~~~~~f~-~~~~~lG~s~~~~G-~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~ 339 (468)
T TIGR00788 262 FLSYANLPGASGSVFC-ATTQCLPGGPSFSG-MSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILV 339 (468)
T ss_pred HHHHhhcCCCCceeEE-EEcccCCCCcchhh-hHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeee
Confidence 11011111111 1111 11145799999999 888888999999999999999999999999988888777665532211
Q ss_pred hhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 261 ADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.. ....... +..+.......+..++.+..+.|. ..+..+..|++.+++.+++.+++
T Consensus 340 ~~-~~~~~gi--~~~~~~~~~~~l~~~~~g~~~~~~-~~~~~~~~p~~~egt~~al~~s~ 395 (468)
T TIGR00788 340 KR-WNLAFGI--SDEVFVLGDSIIAEVLAQLKFMPF-LVLLARLCPSGCESSVFALLASI 395 (468)
T ss_pred ec-cccccCC--CCeeeeeehhHHHHHHHHHHHccH-HHHHHHhCCCCceehHHHHHHHH
Confidence 00 0000000 112233444455556666666666 45668999999999999999888
No 108
>PRK09848 glucuronide transporter; Provisional
Probab=99.49 E-value=1.5e-12 Score=129.65 Aligned_cols=273 Identities=14% Similarity=0.137 Sum_probs=156.7
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh----hhhHHH-HHHHHHHHHHHHHHHHhh-------hHHHHHHH
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAF----GRKASI-LVRSTAFLAGSALRGAAF-------NIYMLIFG 75 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~----Grk~~l-~~~~~~~~~~~~~~~~a~-------~~~~~~~~ 75 (365)
++..|+++.+.|.+.+...+..++..++.|+++||. ||||.. ..+.....+..++....+ ........
T Consensus 36 ~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (448)
T PRK09848 36 TDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLT 115 (448)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHH
Confidence 355688899999999999999999999999999996 777755 445444444443321111 12234445
Q ss_pred HHHhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCC-CCCcchhhhHHHHHHH-----HHHHHHH
Q 017823 76 RVLLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAP-PKNRGAFNIGFQVCVA-----TAVLSAN 149 (365)
Q Consensus 76 r~l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~r~~~~~~~~~~~~-----~g~~i~~ 149 (365)
..+.+++.+...+ ...++..|..+ +++|.+..++-+.+.+ ++..++|
T Consensus 116 ~~~~~~~~~~~~~---------------------------~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p 168 (448)
T PRK09848 116 YMGLGLCYSLVNI---------------------------PYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGP 168 (448)
T ss_pred HHHHHHHHHHhcc---------------------------cHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667777777776 55566666554 4678887766554333 4445555
Q ss_pred HHhhhhccc-c-CCcchHHHH----------------------------------HhHHHHHHHHHHHHHHhcccccchh
Q 017823 150 LLNYGTQKI-K-VGWGWRISL----------------------------------KYRLQFVMAILIPFFQHVTRINVIS 193 (365)
Q Consensus 150 ~~~~~~~~~-~-~~~gwr~~f----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (365)
.++...... . ....|+..+ ..+++.+.......+..........
T Consensus 169 ~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~ 248 (448)
T PRK09848 169 SIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLKISLQTLKRNRPLFMLCIGALCVLISTFAVS 248 (448)
T ss_pred HHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCccCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHh
Confidence 554332100 0 001233322 0011222222222222233333444
Q ss_pred hcHHHHHHH-cCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCch
Q 017823 194 FYAPVLFRT-IKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSI 272 (365)
Q Consensus 194 ~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 272 (365)
...|.++++ .|.++.... .......+..+++.++.+++.||+|+|+.+..+.++..++.+.+.+. +.
T Consensus 249 ~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~-----------~~ 316 (448)
T PRK09848 249 ASSLFYVRYVLNDTGLFTV-LVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWV-----------SV 316 (448)
T ss_pred hhheeeEeeecCChHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHc-----------Cc
Confidence 445555543 455544443 33444456678889999999999999999999888777776655532 11
Q ss_pred hhHHHHHHHHHHHHHhhccccccccccccccCCChh-------hhhHHHHHHHHH
Q 017823 273 GYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLE-------IISAGQIITVAA 320 (365)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~-------~r~~~~~~~~~~ 320 (365)
...+...+...+.+.+.+... +..+...+|..|.+ .+|...|+.+..
T Consensus 317 ~~~~~~~~~~~l~g~G~~~~~-~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~ 370 (448)
T PRK09848 317 WSLPVALVALAIASIGQGVTM-TVMWALEADTVEYGEYLTGVRIEGLTYSLFSFT 370 (448)
T ss_pred hhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhhhHHhhCccchhHHHHHHHHH
Confidence 223333444444555554443 33455667777643 346666666555
No 109
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.46 E-value=1.3e-13 Score=125.27 Aligned_cols=267 Identities=12% Similarity=0.103 Sum_probs=181.4
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHhhcchh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRA-FGRKASILVRSTAFLAGSALRGA---AFNIYMLIFGRVLLGVGIG 84 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr-~Grk~~l~~~~~~~~~~~~~~~~---a~~~~~~~~~r~l~G~~~g 84 (365)
.+.+++.++..++.+.|.....+-+.+.|++.|| +|-|+.-++-+....+|.++.+. .+.+|+++.+|++.|+|.-
T Consensus 72 ~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgE 151 (459)
T KOG4686|consen 72 LDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGE 151 (459)
T ss_pred cccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCch
Confidence 3455568889999999999999999999999996 68887776666666777777654 5889999999999999988
Q ss_pred hhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccc----cC
Q 017823 85 FANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKI----KV 160 (365)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~----~~ 160 (365)
.... .-..|..-|+..|+.+.++|+.....-+|..+--.+..++.+. .+
T Consensus 152 SlAV---------------------------aQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~ 204 (459)
T KOG4686|consen 152 SLAV---------------------------AQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFP 204 (459)
T ss_pred hhhh---------------------------hhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcc
Confidence 7777 7889999999999999999988776666665433332222211 00
Q ss_pred C-----cchHHHH-------------------------------------------HhHHHHHHHHHHHHHHhcccccch
Q 017823 161 G-----WGWRISL-------------------------------------------KYRLQFVMAILIPFFQHVTRINVI 192 (365)
Q Consensus 161 ~-----~gwr~~f-------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 192 (365)
. .|-...+ .+..++++...+++... .....+
T Consensus 205 ~~ghT~LG~~l~~~~~tc~~slical~lg~~D~rAerilh~e~g~~Ge~pkLtdv~~f~ppfw~~~iicv~yy-va~fPF 283 (459)
T KOG4686|consen 205 GVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDRAERILHLEEGFLGEEPKLTDVNTFYPPFWVLVIICVLYY-VAWFPF 283 (459)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHhhhcCcccCCcccccccccCccHHHHHHHHHHHH-HHHHHH
Confidence 0 1111111 23344555555544443 344555
Q ss_pred hhcHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHH-HHHHHHHHHHHHhhhcCCCCCC
Q 017823 193 SFYAPVLF-RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQ-MLVSRVMIGSIMADQIGDHGGF 270 (365)
Q Consensus 193 ~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~-~~i~~~~~~~~~~~~~~~~~~~ 270 (365)
....|.++ +.+|+|+..++ .+.+.....+.+..++.|.++||.|++...+.+..+ ...+-.++.+..
T Consensus 284 i~lg~~fF~~rfGlS~~~a~-~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~---------- 352 (459)
T KOG4686|consen 284 ITLGPMFFQKRFGLSAVSAG-NILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTF---------- 352 (459)
T ss_pred hhhhHHHHHHhhCCChhhcc-chhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhh----------
Confidence 55667777 66899999998 777777778888889999999999999777665444 334444444432
Q ss_pred chhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 271 SIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
-+++ ..+++.+..+... ....|..++-+.|+++-|++.|+.+.+
T Consensus 353 --lsPy---~~m~~lGLsysll-AcslWP~va~~vpE~qLGTaygf~qsI 396 (459)
T KOG4686|consen 353 --LSPY---TSMTFLGLSYSLL-ACSLWPCVASLVPEEQLGTAYGFIQSI 396 (459)
T ss_pred --ccHH---HHHHHHhhhHHHH-HHHHhhhhhhhCCHHHhcchHHHHHHH
Confidence 1122 2222333333211 112244456778899999999999888
No 110
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.44 E-value=3e-12 Score=122.92 Aligned_cols=264 Identities=11% Similarity=0.041 Sum_probs=184.9
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHH-HHHHHHHHHHHHHHHHhhh---HHHHHHHHHHhhcchhhhhhhh
Q 017823 15 SQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASI-LVRSTAFLAGSALRGAAFN---IYMLIFGRVLLGVGIGFANQVS 90 (365)
Q Consensus 15 ~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l-~~~~~~~~~~~~~~~~a~~---~~~~~~~r~l~G~~~g~~~~~~ 90 (365)
.+..+...++..+..++.+|+.|.++|+.|+||.. -....+..+......++++ ++..+..-.+..++......
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~V-- 134 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNV-- 134 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhe--
Confidence 45678888888999999999999999999976654 5555566666666666654 45555667788888888888
Q ss_pred hhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcccc-----------
Q 017823 91 VWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIK----------- 159 (365)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~----------- 159 (365)
...+++.+..++++-++.++.......+|..+...+........
T Consensus 135 -------------------------fyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~ 189 (438)
T COG2270 135 -------------------------FYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLG 189 (438)
T ss_pred -------------------------ehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeec
Confidence 78888999999999999888877777777766555532211100
Q ss_pred ----CCc----------chHHHH-----------------------------------HhHHHHHHHHHHHHHHhccccc
Q 017823 160 ----VGW----------GWRISL-----------------------------------KYRLQFVMAILIPFFQHVTRIN 190 (365)
Q Consensus 160 ----~~~----------gwr~~f-----------------------------------~~~~~~~~~~~~~~~~~~~~~~ 190 (365)
+.. .|-..+ ..+++.+..+++..+...-+.+
T Consensus 190 l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~ 269 (438)
T COG2270 190 LPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVN 269 (438)
T ss_pred cCccccccchhHHHHHHHHHHHHHhHHHhcccccccccccchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHH
Confidence 000 122222 1122234444455554456778
Q ss_pred chhhcHHHHHH-HcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCC
Q 017823 191 VISFYAPVLFR-TIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGG 269 (365)
Q Consensus 191 ~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 269 (365)
.+......+-. ++|++..+.. +......+.+++|+++.|++.||+|.|+++..+.++..+..+...+..
T Consensus 270 til~~~~~fg~~~~gls~~~ll-l~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~--------- 339 (438)
T COG2270 270 TILAMGGVFGAADLGLSSTELL-LIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE--------- 339 (438)
T ss_pred HHHHHHHHHHHHHcCccHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc---------
Confidence 88878888875 8999999998 999999999999999999999999999988888777666665554431
Q ss_pred CchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 270 FSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
......++..+.+.+.+.. ....-.+..+++|+++-++..|+.+..
T Consensus 340 ----~~~~f~i~gll~g~s~G~~-qA~SRSy~~~lvp~~k~~~fFglyalt 385 (438)
T COG2270 340 ----GELDFWILGLLVGTSLGGA-QASSRSYLARLVPKGKEGRFFGLYALT 385 (438)
T ss_pred ----ccHHHHHHHHHHHHhcchH-HHHHHHHHHHhCCCccccceeehhhhh
Confidence 1223333334444444433 334456668999999999988888877
No 111
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.41 E-value=2.6e-11 Score=119.45 Aligned_cols=258 Identities=17% Similarity=0.196 Sum_probs=183.0
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhh----hhhhHH-HHHHHHHHHHHHHHHHHhhh------HHHHHHHH
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRA----FGRKAS-ILVRSTAFLAGSALRGAAFN------IYMLIFGR 76 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr----~Grk~~-l~~~~~~~~~~~~~~~~a~~------~~~~~~~r 76 (365)
++..|+++...|.+..+.=+--++.-|+.|.+.|| +||+|. ++.+....++.+.++-.+++ .....+..
T Consensus 40 Tdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY 119 (467)
T COG2211 40 TDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTY 119 (467)
T ss_pred hcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHH
Confidence 45678889999999999999999999999999996 787665 56677888888888877763 45566677
Q ss_pred HHhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCC-CCCcchhhhHHHHHHHHHHHHHHHHhhhh
Q 017823 77 VLLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAP-PKNRGAFNIGFQVCVATAVLSANLLNYGT 155 (365)
Q Consensus 77 ~l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~r~~~~~~~~~~~~~g~~i~~~~~~~~ 155 (365)
.+.+++....+. ..-++..|+.+ +++|.+..++-+.+..+|.++...+...+
T Consensus 120 ~l~~l~YT~vni---------------------------Py~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~pl 172 (467)
T COG2211 120 MLLGLGYTLVNI---------------------------PYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPL 172 (467)
T ss_pred HHHHHHHHheeC---------------------------chhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888887 77777778765 57899999999999999977766555444
Q ss_pred ccc----cCCcchHHHH-------------------------------------------HhHHHHHHHHHHHHHHhccc
Q 017823 156 QKI----KVGWGWRISL-------------------------------------------KYRLQFVMAILIPFFQHVTR 188 (365)
Q Consensus 156 ~~~----~~~~gwr~~f-------------------------------------------~~~~~~~~~~~~~~~~~~~~ 188 (365)
.+. +...||+... ..+|++.. .+...+....+
T Consensus 173 v~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~Nrp~~~-~l~~~l~~~~~ 251 (467)
T COG2211 173 VKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFKNRPLLL-LLLMNLLLFIA 251 (467)
T ss_pred HHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccccccHHHHHHHHHccchHHH-HHHHHHHHHHH
Confidence 332 2235777665 12222333 33333333444
Q ss_pred ccchhhcHHHHHH-HcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCC
Q 017823 189 INVISFYAPVLFR-TIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDH 267 (365)
Q Consensus 189 ~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 267 (365)
.+.......+|.+ ..|.++.... ..........+++.++...+.+|+|+|+++..+.++..++.+++.+.
T Consensus 252 ~~i~~s~~~yy~~y~lg~~~l~~~-~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~-------- 322 (467)
T COG2211 252 FNIRGSIMVYYVTYVLGDPELFAY-LLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFT-------- 322 (467)
T ss_pred HHHHhhhhheeEEEEcCChHHHHH-HHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhh--------
Confidence 4444434444442 2455555555 56666677777779999999999999999999999999988888876
Q ss_pred CCCchhhHHHHHHHHHHHHHhhccccccccccccccCCC
Q 017823 268 GGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFP 306 (365)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p 306 (365)
+.++....++..++.+.+.+. ..+++|.+.+|..+
T Consensus 323 ---~~~~~~l~~~~~~i~~~g~~~-~~~l~wam~~d~vD 357 (467)
T COG2211 323 ---PAGSVVLIVVALIIAGVGTGI-ANPLPWAMVADTVD 357 (467)
T ss_pred ---cCcchHHHHHHHHHHHHHhhc-cccccHHHhcchhh
Confidence 224455556666666666654 46678998888765
No 112
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.29 E-value=5.2e-12 Score=103.46 Aligned_cols=117 Identities=27% Similarity=0.359 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhhhhhhhccccc
Q 017823 22 TSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSVWLFYFSQTCD 101 (365)
Q Consensus 22 ~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~ 101 (365)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.+...++++++.+.+.+++.|++.+...+
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~------------- 70 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALV------------- 70 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH-------------
Confidence 3456688899999999999999999999999999999999888889999999999999999999888
Q ss_pred chhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 102 LLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
....++.|..|+++|++.++..+....+|..+++.+...+.+ ..+|+..+
T Consensus 71 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~ 120 (141)
T TIGR00880 71 --------------AGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQ---FLGWRAPF 120 (141)
T ss_pred --------------hHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhc---ccchHHHH
Confidence 888889999999999999999999999999999999988873 34576654
No 113
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.29 E-value=1.2e-10 Score=110.70 Aligned_cols=210 Identities=8% Similarity=0.028 Sum_probs=150.2
Q ss_pred HHhhhHHHHHHHHHHhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHH
Q 017823 64 GAAFNIYMLIFGRVLLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVAT 143 (365)
Q Consensus 64 ~~a~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~ 143 (365)
+...+++.++++-++.|.|.+...+ ....++.+..|+|++.+.+++.+.++++
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~---------------------------~~n~~v~~~~~~~~~~~~l~~~~~~~~~ 57 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQV---------------------------AANPYVSILGPIETAASRLALTQAFNKL 57 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHh---------------------------hHHHHHHHHCCcchHHHHHHHHHHHhhh
Confidence 3557899999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHHhhhhccccC-------------CcchHHHH----------------------------------------Hh
Q 017823 144 AVLSANLLNYGTQKIKV-------------GWGWRISL----------------------------------------KY 170 (365)
Q Consensus 144 g~~i~~~~~~~~~~~~~-------------~~gwr~~f----------------------------------------~~ 170 (365)
|..++|.++..+..... ...|+.++ ..
T Consensus 58 G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 137 (310)
T TIGR01272 58 GTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVARVSSGDTTQKTSAF 137 (310)
T ss_pred HHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccccccccccccchhhHH
Confidence 99999999987663210 13688777 00
Q ss_pred HHHHHHHHHHHHHHhcccccchhhcHHHHHHH---cCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHH
Q 017823 171 RLQFVMAILIPFFQHVTRINVISFYAPVLFRT---IKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGI 247 (365)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~ 247 (365)
+++......+..+...........|.+.|+++ .|+++++.. ........+.++|+++++++.||+|+|+.+..+..
T Consensus 138 ~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~-~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~ 216 (310)
T TIGR01272 138 QFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAA-HFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAF 216 (310)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 22223333444444454566777889999964 488998888 88999999999999999999999999998887776
Q ss_pred HHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHH
Q 017823 248 QMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIIT 317 (365)
Q Consensus 248 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~ 317 (365)
+..+..++.... + . . .......+.+++.+..++.. .....+..|++ .+++.++.
T Consensus 217 l~~~~~~l~~~~-----------~-~-~-~~~~~~~l~g~~~s~i~P~~-~s~a~~~~~~~-~~~asai~ 270 (310)
T TIGR01272 217 LAVLLSIGAALT-----------H-G-Y-VAMWFVLALGLFNSIMFPTI-FSLALNALGRH-TSQGSGIL 270 (310)
T ss_pred HHHHHHHHHHHc-----------C-C-H-HHHHHHHHHHHHHHHHHHHH-HHHHHhhhhhh-hhhhHHHH
Confidence 666655333322 1 1 1 11223334455555444443 44556766654 34444543
No 114
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.24 E-value=1.4e-10 Score=112.14 Aligned_cols=272 Identities=13% Similarity=0.048 Sum_probs=174.6
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh------hHH--HHHHHHHHhhc
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAF------NIY--MLIFGRVLLGV 81 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~------~~~--~~~~~r~l~G~ 81 (365)
.++ +.+..-|...+|.+.+....+++-|+.|++|-|...+++..+.++|+.+...+. .++ ....+..+.+.
T Consensus 74 ~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~ 152 (480)
T KOG2563|consen 74 FYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAA 152 (480)
T ss_pred Hhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHH
Confidence 344 555667888899999999999999999999999999999999999999988773 344 56677777777
Q ss_pred chhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcccc--
Q 017823 82 GIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIK-- 159 (365)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~-- 159 (365)
+.-.... .-+....-|+|+++|..+..+-.++..+|.+++.++...+....
T Consensus 153 Aq~Fim~---------------------------lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~ 205 (480)
T KOG2563|consen 153 AQPFILG---------------------------LPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKD 205 (480)
T ss_pred hhhHhhc---------------------------cccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCC
Confidence 7766665 44555677999999999999999999999999999888877554
Q ss_pred -CCcchHHH--H--------------------------------------------HhHHHHHHHHHHHHHHhcccccch
Q 017823 160 -VGWGWRIS--L--------------------------------------------KYRLQFVMAILIPFFQHVTRINVI 192 (365)
Q Consensus 160 -~~~gwr~~--f--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 192 (365)
++..|... + ..+.+.+....+........++..
T Consensus 206 ~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l 285 (480)
T KOG2563|consen 206 SEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSL 285 (480)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHH
Confidence 33556553 2 111112222222222222233333
Q ss_pred hhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcch-HHHHhHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 017823 193 SFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKV-LFLVGGIQMLVSRVMIGSIMADQIGDHGGFS 271 (365)
Q Consensus 193 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~-~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 271 (365)
...+..-+...|++...++ +...+..+.+++++.++|++.||.++-+ ..++......++.+.+.... . ..
T Consensus 286 ~~~l~~~l~~sgY~~~~aG-~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t-~-------~~ 356 (480)
T KOG2563|consen 286 STLLNLALCPSGYEGVFAG-YIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCT-L-------FL 356 (480)
T ss_pred HHHhhhccccccCCccccc-hhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhh-c-------cC
Confidence 3333222334567777777 8889999999999999999999987644 44444444444432222221 0 01
Q ss_pred hhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 272 IGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
...+.......++++ +..+..|+..-+..|..=+..-++..|+.+..
T Consensus 357 -~~~viv~~t~~~~g~-~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~ 403 (480)
T KOG2563|consen 357 -GDSVIVFTTCGLLGF-FGTGYLPIGFELGVETTYPVAEGTSSGLLNLS 403 (480)
T ss_pred -CceEehhhhHHHHHH-hhcCCCCcceeeeeeeccccCCcccceeEEee
Confidence 112222222222333 34456677666767764333334444544444
No 115
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.19 E-value=1.2e-09 Score=107.20 Aligned_cols=274 Identities=15% Similarity=0.159 Sum_probs=187.7
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHhhcchhhhh
Q 017823 11 SKFDSQLLTTFTSSLYIAGLIASLFASSVTRAF-GRKASILVRSTAFLAGSALRGAA--FNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 11 ~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~-Grk~~l~~~~~~~~~~~~~~~~a--~~~~~~~~~r~l~G~~~g~~~ 87 (365)
+++|.++..-+.+.|.--..+..+++|+++||+ |+|++++.+.++..+|.++.+.+ .+...+.++-++.++|.|..-
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K 135 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFK 135 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccccc
Confidence 779999999999999999999999999999995 99999999999999999999888 478899999999999999999
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCC--CcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPK--NRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWR 165 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~--~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr 165 (365)
+ ....++.|.+|++ +|....+++.++.++|.+++|.+..++. ++.||.
T Consensus 136 ~---------------------------NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~---~~~g~~ 185 (498)
T COG3104 136 P---------------------------NISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLA---INYGWH 185 (498)
T ss_pred c---------------------------cHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHH---HhhCHH
Confidence 9 8889999999875 3777888999999999999999999988 556788
Q ss_pred HHH-----------------------------------------------------------------------------
Q 017823 166 ISL----------------------------------------------------------------------------- 168 (365)
Q Consensus 166 ~~f----------------------------------------------------------------------------- 168 (365)
..|
T Consensus 186 ~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~ 265 (498)
T COG3104 186 VGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAII 265 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888
Q ss_pred ------------HhHHHHHHHHHHHHHH------hcccccchhhcHHHHH-HH-cCCCcchhhHHHHHHHHHHHHHHHHH
Q 017823 169 ------------KYRLQFVMAILIPFFQ------HVTRINVISFYAPVLF-RT-IKLSESTSLLMSAIVTGSLGTISTSL 228 (365)
Q Consensus 169 ------------~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 228 (365)
..|++.+..+.+..+. .--....++.|..... ++ .|++-... +.-+...+.-++..++
T Consensus 266 ~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~--~fQslNp~~Iii~~pI 343 (498)
T COG3104 266 YFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPA--WFQSLNPFFIILFSPI 343 (498)
T ss_pred HHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHH--HHHhhCHHHHHHHHHH
Confidence 1233333222221111 1111223333333332 12 23333322 3556666666777777
Q ss_pred HHHHHhhhCcc-------hHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhcccccccccccc
Q 017823 229 SMILADRLGRK-------VLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVP 301 (365)
Q Consensus 229 ~g~l~dr~grr-------~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (365)
...+-.|.+++ .-+-++..++..+.+.+.........+. +..+.++.+....+..++ ....+|+...++
T Consensus 344 ~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~---~~~s~~~lil~y~l~s~g-EL~iSpvGLs~~ 419 (498)
T COG3104 344 LAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPS---GLVSVWWLVLSYVLQSFG-ELFISPVGLSMV 419 (498)
T ss_pred HHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCC---CCcCHHHHHHHHHHHHHH-HHHhCHHHHHHH
Confidence 77776664433 2345566666666666665532222111 222334444444444443 566788888888
Q ss_pred ccCCChhhhhHHHHHHHHH
Q 017823 302 SENFPLEIISAGQIITVAA 320 (365)
Q Consensus 302 ~e~~p~~~r~~~~~~~~~~ 320 (365)
..+.|++..+..++.-...
T Consensus 420 t~laP~~~~s~~ma~wfLt 438 (498)
T COG3104 420 TKLAPPALKSFIMAMWFLT 438 (498)
T ss_pred HHhChHHHHHHHHHHHHHH
Confidence 9999998888777765444
No 116
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.16 E-value=1.1e-09 Score=106.78 Aligned_cols=265 Identities=15% Similarity=0.124 Sum_probs=146.3
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH--HHHHHHHH-HHh----hhHH-HHHHHHHHhhc
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTA--FLAGSALR-GAA----FNIY-MLIFGRVLLGV 81 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~--~~~~~~~~-~~a----~~~~-~~~~~r~l~G~ 81 (365)
..|+|.+++|.+.++..+...+.+|+.|.++||+|.||-++..... ...+.... .+. .|++ ..+++-...|+
T Consensus 37 ~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~ 116 (412)
T PF01306_consen 37 VAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGL 116 (412)
T ss_dssp HH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTT
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578899999999999999999999999999999966654433322 22232222 222 2222 22233333344
Q ss_pred chhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCC
Q 017823 82 GIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVG 161 (365)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~ 161 (365)
......+ ..-+++.++. ++.+.=.|-..+..++|..++..+++.+.+..++
T Consensus 117 ~f~~~~~---------------------------~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i~p~ 167 (412)
T PF01306_consen 117 VFNAGVP---------------------------LSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNINPN 167 (412)
T ss_dssp TTTTHHH---------------------------HHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcccch---------------------------HHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeeeCcc
Confidence 3334444 3333333332 2222223333344444444444444433321110
Q ss_pred c-chHHHH------------------------------------------HhHHHHHHHHHHHHHHhcccccchhhcHHH
Q 017823 162 W-GWRISL------------------------------------------KYRLQFVMAILIPFFQHVTRINVISFYAPV 198 (365)
Q Consensus 162 ~-gwr~~f------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (365)
. -|-... +.++ ++.+.+......+.+.......|.
T Consensus 168 ~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~~~--fw~~~l~v~g~~~~Y~vfdqqf~~ 245 (412)
T PF01306_consen 168 IIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKKDKVSLKDVLSLFKMRN--FWFFVLFVIGVAAIYDVFDQQFPI 245 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS------HHHHHHHTTSHH--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCCCCCcHHHHHHHhcchh--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 011110 2222 222222222212233333333444
Q ss_pred HHHHc----CCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhh
Q 017823 199 LFRTI----KLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGY 274 (365)
Q Consensus 199 ~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 274 (365)
|+..+ +.+....+ ...++--+.+++.-.+..++.+|+|.|+.++++..++.+-.+..++. ++
T Consensus 246 y~~~~f~~~~~g~~~~G-~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~-------------~~ 311 (412)
T PF01306_consen 246 YFASFFQSAGQGNQMYG-YLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFA-------------TN 311 (412)
T ss_dssp HHHHTSSSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT---------------S
T ss_pred HHHHHhcccccChhHHh-HHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhh-------------cc
Confidence 54433 33445556 77778888889999999999999999999999999999998888776 33
Q ss_pred HHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 275 AYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.+.+...-.+.+.-+....-+. .-+.++.+|+|..++.+.+..++
T Consensus 312 ~~~i~~~klLH~~e~~l~lva~-fkYI~~~fd~rlsAt~y~v~~~~ 356 (412)
T PF01306_consen 312 PWVISLIKLLHALEFPLLLVAA-FKYITAHFDKRLSATLYLVGFQF 356 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHS-GGGHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCHhHHHHHHHHHHHH
Confidence 5566666666666655443333 34668999999998888877555
No 117
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.11 E-value=2.5e-09 Score=101.48 Aligned_cols=208 Identities=14% Similarity=0.092 Sum_probs=134.2
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
+++|++..+++.+....+...++..++.|.++||+|||+..+.-.++.+++++. -..++++.++++|++.|++....+.
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~~~~~L~~GRvlgGiaTSLLfS 140 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSSNYPVLLLGRVLGGIATSLLFS 140 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-HhccccHHHHHHHHHHHHHHHHHHH
Confidence 357888999999999999999999999999999999999999999999998864 4568899999999999999999988
Q ss_pred h-hhhhhhhcccccchhhhhHHHhhcccccceeecccC----CCCCcchhhhHHH-HHHHHHHHHHHHHhhhhccccCCc
Q 017823 89 V-SVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMA----PPKNRGAFNIGFQ-VCVATAVLSANLLNYGTQKIKVGW 162 (365)
Q Consensus 89 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~----~~~~r~~~~~~~~-~~~~~g~~i~~~~~~~~~~~~~~~ 162 (365)
+ +-|+ +.|+. |++..+...+... ...++-.+.+.+++..+.+..+ .
T Consensus 141 ~FEsW~---------------------------V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~-~ 192 (354)
T PF05631_consen 141 AFESWM---------------------------VHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFG-F 192 (354)
T ss_pred HHHHHH---------------------------HHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhC-C
Confidence 6 7777 34432 2222222222111 1122222333333333322111 1
Q ss_pred chHHHH------------------------------------------HhHHHHHHHHHHHHHHhcccccchhhcHHHHH
Q 017823 163 GWRISL------------------------------------------KYRLQFVMAILIPFFQHVTRINVISFYAPVLF 200 (365)
Q Consensus 163 gwr~~f------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (365)
|-..+| ...++.+....+......+.+.....|.|.+-
T Consensus 193 g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~ 272 (354)
T PF05631_consen 193 GPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALD 272 (354)
T ss_pred CCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceec
Confidence 112222 22345555666666666666677777888876
Q ss_pred HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh-hhCcchHHHHhHHH
Q 017823 201 RTIKLSESTSLLMSAIVTGSLGTISTSLSMILAD-RLGRKVLFLVGGIQ 248 (365)
Q Consensus 201 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~grr~~l~~~~~~ 248 (365)
. +-++...+ .+........++|+.+..++.. +......+.....+
T Consensus 273 ~--~~~~~P~G-lIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~~ 318 (354)
T PF05631_consen 273 P--DDEELPLG-LIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFAV 318 (354)
T ss_pred C--CCCCCCch-HHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 1 11122344 7888888899999988866554 43333333333333
No 118
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.08 E-value=6.7e-10 Score=106.34 Aligned_cols=130 Identities=15% Similarity=0.055 Sum_probs=109.3
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhH--HHHHHHHHHhhcchhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNI--YMLIFGRVLLGVGIGFA 86 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~--~~~~~~r~l~G~~~g~~ 86 (365)
++.+.+.++.+.+.+...++..+++++.|++.||+|||+.+..+..+..++.++..+.++. ..+....++.|++.+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 312 (377)
T TIGR00890 233 QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGT 312 (377)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccc
Confidence 3456778889999999999999999999999999999999999988888888877776643 33456678888888877
Q ss_pred hhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHH
Q 017823 87 NQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRI 166 (365)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~ 166 (365)
.+ ..+.++.|..|+++|++..++.+....+|..+++.+.+.+. +..||+.
T Consensus 313 ~~---------------------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~---~~~g~~~ 362 (377)
T TIGR00890 313 IS---------------------------LFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHAL---TEIGFEY 362 (377)
T ss_pred hh---------------------------ccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHH---hhhchhh
Confidence 77 67778899999999999999999999999999999998887 3346766
Q ss_pred HH
Q 017823 167 SL 168 (365)
Q Consensus 167 ~f 168 (365)
.+
T Consensus 363 ~f 364 (377)
T TIGR00890 363 TF 364 (377)
T ss_pred HH
Confidence 54
No 119
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.05 E-value=9.5e-10 Score=104.01 Aligned_cols=128 Identities=22% Similarity=0.269 Sum_probs=117.5
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhH-HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhh
Q 017823 11 SKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKA-SILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQV 89 (365)
Q Consensus 11 ~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~-~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~ 89 (365)
.+.++.+.++..+...++..++.++.+++.||+|||+ .+..+..+..++.+.....++.+.+.+..++.|++.+...+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~- 284 (352)
T cd06174 206 LGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFP- 284 (352)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccch-
Confidence 3677999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred hhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 90 SVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
....++.|..|+++|++..+..+....+|..+++.+.+.+.+ ..+|+..+
T Consensus 285 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~---~~~~~~~~ 334 (352)
T cd06174 285 --------------------------ALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD---TGGYGGVF 334 (352)
T ss_pred --------------------------hHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---ccCcchHH
Confidence 889999999999999999999999999999999999998874 34566554
No 120
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.02 E-value=4.7e-09 Score=101.83 Aligned_cols=130 Identities=8% Similarity=0.053 Sum_probs=95.2
Q ss_pred HHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHH
Q 017823 176 MAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVM 255 (365)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~ 255 (365)
....+..+.............|.+.++.|.++.+.+ ...+...++..++.++.|+++||+|||+.+..+.++..++.+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g-~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~ 93 (405)
T TIGR00891 15 SAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAA-SLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLA 93 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHH-HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 333333443344555566677888889999999998 8889999999999999999999999999999988888777776
Q ss_pred HHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 256 IGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.... ++.+...+...+.+.+.+... +....+..|.+|+++|+++.++.+..
T Consensus 94 ~~~~-------------~~~~~l~~~~~l~G~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~ 144 (405)
T TIGR00891 94 CGFA-------------PGYITMFIARLVIGIGMGGEY-GSSAAYVIESWPKHLRNKASGLLISG 144 (405)
T ss_pred HHHh-------------ccHHHHHHHHHHHHhhhhhhh-HHHHHHHHHhCChhhhhHHHHHHHHH
Confidence 6554 223344445555555554433 33355668999999999998887765
No 121
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.00 E-value=3.1e-09 Score=103.96 Aligned_cols=129 Identities=16% Similarity=0.117 Sum_probs=104.1
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
++++.|+.+.+.+.+...++..++.++.|+++||+|||+.+..+.....+.......+++.+.+++.|++.+++.|...+
T Consensus 245 ~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~ 324 (393)
T PRK15011 245 NELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGG 324 (393)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 45677788999988888888888999999999999999988777666555555555667888888899999888887776
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
....+..|..|+ +|+++.+..+....+|..+++.+++.+.+ .+||+..+
T Consensus 325 ---------------------------~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~---~~g~~~~~ 373 (393)
T PRK15011 325 ---------------------------IGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAE---IWNYHAVF 373 (393)
T ss_pred ---------------------------HHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHH---HhhhHHHH
Confidence 555667888874 69999999999999999999999998873 34676654
No 122
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=98.99 E-value=1.7e-09 Score=106.91 Aligned_cols=128 Identities=15% Similarity=0.182 Sum_probs=108.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh----hHHHHHHHHHHhhcchhhhhhh
Q 017823 14 DSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAF----NIYMLIFGRVLLGVGIGFANQV 89 (365)
Q Consensus 14 ~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~----~~~~~~~~r~l~G~~~g~~~~~ 89 (365)
+.++.+...++..++..++.++.|++.||+|||+.+..+.++.+++..+..... +++.+++.+++.|++.+...+
T Consensus 249 ~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~- 327 (418)
T TIGR00889 249 VVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNI- 327 (418)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHH-
Confidence 346789999999999999999999999999999999999999888876666532 346677889999999998888
Q ss_pred hhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHH-HHHHHHHHHHHHHhhhhccccCC---cchH
Q 017823 90 SVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQ-VCVATAVLSANLLNYGTQKIKVG---WGWR 165 (365)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~-~~~~~g~~i~~~~~~~~~~~~~~---~gwr 165 (365)
....++.|.+|+++|+++.++.+ ...++|..+||++++.+.+..+. +||+
T Consensus 328 --------------------------~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~ 381 (418)
T TIGR00889 328 --------------------------SGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQ 381 (418)
T ss_pred --------------------------HHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchH
Confidence 77888999999999999999997 67899999999999988865432 5687
Q ss_pred HHH
Q 017823 166 ISL 168 (365)
Q Consensus 166 ~~f 168 (365)
..|
T Consensus 382 ~~f 384 (418)
T TIGR00889 382 TMW 384 (418)
T ss_pred HHH
Confidence 665
No 123
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.97 E-value=9.5e-09 Score=101.97 Aligned_cols=117 Identities=15% Similarity=0.068 Sum_probs=90.2
Q ss_pred ccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCC
Q 017823 189 INVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHG 268 (365)
Q Consensus 189 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 268 (365)
......+.|.+.++.|.+..+.+ ...+...++..++.++.|++.||+|||+.+..+.++..++.++....
T Consensus 39 ~~~~~~~~~~~~~~~g~s~~~~g-~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~--------- 108 (434)
T PRK11663 39 RKSFNAAMPEMLADLGLSRSDIG-LLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFS--------- 108 (434)
T ss_pred hhhHHHhhHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHH---------
Confidence 34556678899999999999988 88899999999999999999999999999999988888887766654
Q ss_pred CCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 269 GFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
++.+...+...+.+.+.+..+.+. ..+..|.+|+++|+++.++.+..
T Consensus 109 ----~~~~~l~~~~~l~g~~~g~~~~~~-~~~~~~~~~~~~rg~~~~~~~~~ 155 (434)
T PRK11663 109 ----SSLWAFALLWVLNAFFQGWGWPVC-AKLLTAWYSRTERGGWWAIWNTA 155 (434)
T ss_pred ----hHHHHHHHHHHHHHHHHHccchHH-HHHHHHhCCHHHHHHHHHHHHHH
Confidence 223333344444455555444433 45668999999999999888766
No 124
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.96 E-value=7.8e-09 Score=99.82 Aligned_cols=133 Identities=17% Similarity=0.075 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHH
Q 017823 173 QFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVS 252 (365)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~ 252 (365)
+.......................|.+.++.|.++++.+ ...+...++..++.++.|+++||+|||+.+..+..+..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g-~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 83 (385)
T TIGR00710 5 AFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQ-MTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALS 83 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH
Confidence 333333333333333444444567888899999999998 8999999999999999999999999999999988888887
Q ss_pred HHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 253 RVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.+..... ++.+...+...+.+.+.+... +....+..|.+|+++|+++.++.+..
T Consensus 84 ~~~~~~~-------------~~~~~~~~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (385)
T TIGR00710 84 SLGLALS-------------NNIETLLVLRFVQAFGASAGS-VISQALVRDIYPGEELSRIYSILMPV 137 (385)
T ss_pred HHHHHHH-------------ccHHHHHHHHHHHHcchhHHH-HHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 7776654 223334444444444444333 33355668999999999999887766
No 125
>TIGR00895 2A0115 benzoate transport.
Probab=98.96 E-value=9.8e-09 Score=99.14 Aligned_cols=118 Identities=17% Similarity=0.079 Sum_probs=89.0
Q ss_pred cccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCC
Q 017823 188 RINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDH 267 (365)
Q Consensus 188 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 267 (365)
.......+.|.+.++.|.++.+.+ .......++..++.++.++++||+|||+.+..+..+..++.+.....
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~-------- 102 (398)
T TIGR00895 32 DLAAMGFAAPAISAEWGLDPVQLG-FLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALA-------- 102 (398)
T ss_pred HHHHHHhhHHHHhhccCCCHHHHH-HHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHc--------
Confidence 344555678888889999998888 88888899999999999999999999999999888877777666543
Q ss_pred CCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 268 GGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
++.+...+...+.+++.+... +....+..|.+|+++|+++.++....
T Consensus 103 -----~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~ 149 (398)
T TIGR00895 103 -----TNVTQLLILRFLAGLGLGGLM-PNLNALVSEYAPKRFRGTAVGLMFCG 149 (398)
T ss_pred -----cchHHHHHHHHHHhcccccch-hhHHHHHHHHcCHHhhchhHhhHhhH
Confidence 123334444555555544333 44466778999999999988887655
No 126
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.96 E-value=2.1e-09 Score=112.88 Aligned_cols=112 Identities=12% Similarity=-0.053 Sum_probs=101.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhhhhhhhc
Q 017823 18 LTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSVWLFYFS 97 (365)
Q Consensus 18 ~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~ 97 (365)
......+..++..++.++.|+++||+|||++++.+.++.+++.++.+++++.+.+++.+++.|+..+...+
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~--------- 667 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWN--------- 667 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHH---------
Confidence 44556677799999999999999999999999999999999999999998888888899999988888888
Q ss_pred ccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 98 QTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
....+++|++|++.|++++++......+|.+++|.+++.+.
T Consensus 668 ------------------~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~ 708 (742)
T TIGR01299 668 ------------------ALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFV 708 (742)
T ss_pred ------------------HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999987665
No 127
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.95 E-value=5.2e-08 Score=94.01 Aligned_cols=267 Identities=12% Similarity=0.017 Sum_probs=169.9
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHH-HHHHHHHHHHHHHHh-----h-------hH--
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFG-----RKASILV-RSTAFLAGSALRGAA-----F-------NI-- 69 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~G-----rk~~l~~-~~~~~~~~~~~~~~a-----~-------~~-- 69 (365)
|++++....+...+..++... ..+.+|+.+|+.+ ||..+++ +..+...+..+..++ . +.
T Consensus 9 EL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~ 87 (403)
T PF03209_consen 9 ELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWL 87 (403)
T ss_pred HhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHH
Confidence 344447777777777766554 5889999999999 7777654 666666666665553 2 11
Q ss_pred H--HHHHHHHHhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHH
Q 017823 70 Y--MLIFGRVLLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLS 147 (365)
Q Consensus 70 ~--~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i 147 (365)
+ ...+.-.+.|+|.+...+ +..+++.|..|+|+|+++.++.....-+|..+
T Consensus 88 g~~~a~l~F~l~G~G~~~s~T---------------------------~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv 140 (403)
T PF03209_consen 88 GLALAALAFLLYGLGVHASGT---------------------------SFLALLADLAPEERRPRVVAIVWVMLIVGIIV 140 (403)
T ss_pred HHHHHHHHHHHHHhhHhHhHH---------------------------HHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHH
Confidence 2 233445567888877777 88899999999999999999999999999999
Q ss_pred HHHHhhhhccccCCcchHHHH----------------------------------------------HhHHHHHHHHHHH
Q 017823 148 ANLLNYGTQKIKVGWGWRISL----------------------------------------------KYRLQFVMAILIP 181 (365)
Q Consensus 148 ~~~~~~~~~~~~~~~gwr~~f----------------------------------------------~~~~~~~~~~~~~ 181 (365)
+..+.+.+.+......-...+ +.-++++..+.+.
T Consensus 141 ~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~ 220 (403)
T PF03209_consen 141 SAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLFLG 220 (403)
T ss_pred HHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHHHH
Confidence 988876554321100000000 1112222222221
Q ss_pred HHHhcccccchhhcHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh-hhCcchHHHHhHHHHHHHHHHHHHH
Q 017823 182 FFQHVTRINVISFYAPVLF-RTIKLSESTSLLMSAIVTGSLGTISTSLSMILAD-RLGRKVLFLVGGIQMLVSRVMIGSI 259 (365)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-r~grr~~l~~~~~~~~i~~~~~~~~ 259 (365)
.+ +++.....+-.|- +.+|++..+.. .+....+.+..+|-...+++.. |.++|+....++....++...+...
T Consensus 221 t~----a~~~QD~iLEPygg~Vfgmsv~eTT-~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a 295 (403)
T PF03209_consen 221 TL----AFFMQDVILEPYGGEVFGMSVGETT-RLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILA 295 (403)
T ss_pred HH----HHHhhHHHcCCchhHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 11 2222222222222 56799999988 8888889999999988888766 6777888888888888888777665
Q ss_pred HhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 260 MADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
... .+.+.......+++++.+..-.... ...-++.++++.|...|.-.+.
T Consensus 296 ~~~----------~~~~~~~~~~~l~G~g~G~f~vgal-s~mM~lt~~~~aG~~mG~WGaa 345 (403)
T PF03209_consen 296 GPL----------GSPWLFRPGVFLLGLGNGLFTVGAL-SLMMDLTSAGRAGLFMGAWGAA 345 (403)
T ss_pred Hhc----------ccchHHHHHHHHHHHhhhHHHHHHH-HHHHhCCCCcchhHHHHHHHHH
Confidence 311 2344555555555555443322222 2235777777777666655554
No 128
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.95 E-value=2.9e-09 Score=105.02 Aligned_cols=127 Identities=13% Similarity=0.109 Sum_probs=109.7
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhh
Q 017823 12 KFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSV 91 (365)
Q Consensus 12 ~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~ 91 (365)
+.+..+.|.+.++..++..++.++.|++.||+|||+.+..+..+..++..+.++++|++.+++.+++.|++.+...+
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~--- 334 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLV--- 334 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH---
Confidence 45567889999999999999999999999999999999999999999888888899999999999999998888777
Q ss_pred hhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhH-HHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 92 WLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIG-FQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~-~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
....++.|..|++.|+...+. ++....+|..+++.+.+.+.+ ..|||..|
T Consensus 335 ------------------------~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~---~~G~~~~f 385 (420)
T PRK09528 335 ------------------------GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYD---SIGFQGTY 385 (420)
T ss_pred ------------------------HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHH---hhCchHHH
Confidence 667788899999999887655 677788999999999988874 34677665
No 129
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.95 E-value=6.1e-09 Score=99.94 Aligned_cols=116 Identities=20% Similarity=0.039 Sum_probs=90.8
Q ss_pred cchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCC
Q 017823 190 NVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGG 269 (365)
Q Consensus 190 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 269 (365)
.......|.+.++.|.++.+.+ .......++..++.++.|+++||+|||+.+..+.++..++.......
T Consensus 11 ~~~~~~~~~~~~~~g~s~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~---------- 79 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGLSAAQYG-YVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA---------- 79 (399)
T ss_pred HhhhHhHHHHHHhhCCChhhHH-HHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH----------
Confidence 3444567777888999999998 89999999999999999999999999999999888888877777664
Q ss_pred CchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 270 FSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
++.+...+...+.+.+.+.. .+....+..|.+|+++|+++.++....
T Consensus 80 ---~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~ 126 (399)
T TIGR00893 80 ---GAYVSLYILRVLLGAAEAPF-FPGIILIVASWFPASERATAVSIFNSA 126 (399)
T ss_pred ---cCHHHHHHHHHHHHHHHHhh-hhHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 22444555555666665443 344456678999999999999987766
No 130
>PRK10054 putative transporter; Provisional
Probab=98.92 E-value=1.6e-08 Score=99.26 Aligned_cols=126 Identities=10% Similarity=0.093 Sum_probs=89.5
Q ss_pred HHHHHhcccccchhhcHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHH
Q 017823 180 IPFFQHVTRINVISFYAPVLF-RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGS 258 (365)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~ 258 (365)
+..+....+......+.|.++ ++.|+++.+.+ ...+...+...++.++.|+++||+|||+.+..+.....++.+.+.+
T Consensus 14 ~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g-~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~ 92 (395)
T PRK10054 14 ASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIG-YAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPL 92 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH
Confidence 333333445566666777776 56899999999 8888888999999999999999999999998888877777766655
Q ss_pred HHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 259 IMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
. ++.+..++...+.+...+ ...+....+..|..|+++|+++.++.+..
T Consensus 93 ~-------------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 140 (395)
T PRK10054 93 V-------------NNVTLVVLFFALINCAYS-VFSTVLKAWFADNLSSTSKTKIFSLNYTM 140 (395)
T ss_pred H-------------hHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHhHHHHHHHHHHHH
Confidence 4 122333333333333333 23444456668999999999998888766
No 131
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.91 E-value=2.7e-08 Score=98.10 Aligned_cols=132 Identities=14% Similarity=-0.010 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHH
Q 017823 174 FVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSR 253 (365)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~ 253 (365)
......+.+...........+..|.+.+++|.+..+.+ ...+...++..++.++.|+++||+|||+.+..+.++..++.
T Consensus 9 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~ 87 (412)
T TIGR02332 9 LIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFG-LAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIAS 87 (412)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHH-HHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHH
Confidence 33333444444344445555667777789999999999 89999999999999999999999999999999988888888
Q ss_pred HHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 254 VMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+..... ++.+...+.-.+.+++.+.. .|....+.+|.+|+++|+++.++.+..
T Consensus 88 ~~~~~~-------------~~~~~l~~~r~l~G~~~~~~-~~~~~~~~~~~~~~~~rg~~~~~~~~~ 140 (412)
T TIGR02332 88 TATMFA-------------TGPESLYLLRILVGIAEAGF-LPGILLYLTFWFPAYFRARANALFMIA 140 (412)
T ss_pred HHHHHh-------------cCHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 877664 22334444455555555433 344455679999999999998888765
No 132
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.90 E-value=6.4e-08 Score=96.48 Aligned_cols=253 Identities=14% Similarity=0.099 Sum_probs=170.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhhhhhhhcc
Q 017823 19 TTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSVWLFYFSQ 98 (365)
Q Consensus 19 ~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~ 98 (365)
+.......+...+.++..|.++||+|||..+........+......+.. +|.++ +.|+..+....
T Consensus 65 ~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~---------- 129 (463)
T KOG2816|consen 65 GVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAI---------- 129 (463)
T ss_pred hHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhh----------
Confidence 3333345678889999999999999999999999999988888877766 33333 55554443333
Q ss_pred cccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH----------
Q 017823 99 TCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL---------- 168 (365)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f---------- 168 (365)
++...++++|....++|....++.......+..++|.++....+..+ .-..+
T Consensus 130 ---------------~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~---~a~~f~ia~~~~~~~ 191 (463)
T KOG2816|consen 130 ---------------FSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLG---IALVFLIAAASGILS 191 (463)
T ss_pred ---------------hhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcC---chHHHHHHHHHHHHH
Confidence 11788889999999999999999999999999999999887664321 21221
Q ss_pred ---------------------------------------------HhHHHHHHHHHHHHHHhcccccchhhcHHHHH-HH
Q 017823 169 ---------------------------------------------KYRLQFVMAILIPFFQHVTRINVISFYAPVLF-RT 202 (365)
Q Consensus 169 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 202 (365)
+.+|..+......++..........-..+.++ ..
T Consensus 192 ~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~ 271 (463)
T KOG2816|consen 192 LLYMLLFLPESLQEKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAK 271 (463)
T ss_pred HHHHhhccccccCccccccccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeee
Confidence 12222233233333322221111110112333 34
Q ss_pred cCCCcchhhHHHHHHHHHHHHHHHHHHH-HHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHH
Q 017823 203 IKLSESTSLLMSAIVTGSLGTISTSLSM-ILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVL 281 (365)
Q Consensus 203 ~g~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (365)
+++++++.. ...+...+...++..+.. .+...+|.|+....+.....+.....++.. ..|.....
T Consensus 272 f~w~~~~~s-~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~-------------~~w~~~~~ 337 (463)
T KOG2816|consen 272 FGWNKKEFS-DLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFAT-------------ETWMMFAA 337 (463)
T ss_pred cCcCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhc-------------cchhhhHH
Confidence 688999888 888888889999988887 778888999988888888888888888762 22222222
Q ss_pred HHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 282 ICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
..+. .++....|......+...+++++|+++++...+
T Consensus 338 ~v~~--~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i 374 (463)
T KOG2816|consen 338 GVVV--ALAGIVFPAIRAFASILVSPEEQGKVFGIISGI 374 (463)
T ss_pred HHHH--HhhcchhHHHHhHHHhhcccccccchhhHHHHH
Confidence 2221 122233444456668888999999999999888
No 133
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.89 E-value=5.1e-09 Score=100.33 Aligned_cols=115 Identities=14% Similarity=0.038 Sum_probs=87.6
Q ss_pred cchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCC
Q 017823 190 NVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGG 269 (365)
Q Consensus 190 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 269 (365)
.......|.+.++.|.++.+.+ ...+...++..++.++.|+++||+|||+.+..+..+..++.++....
T Consensus 12 ~~~~~~~~~~~~~~g~s~~~~g-~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~---------- 80 (379)
T TIGR00881 12 KNFALAMPYLVEEIGLSKTDLG-LLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS---------- 80 (379)
T ss_pred HhhhhhhHHHHHHhCCCHhHHH-HHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh----------
Confidence 4445567888888999999998 89999999999999999999999999999999998888888777665
Q ss_pred CchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHH
Q 017823 270 FSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVA 319 (365)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 319 (365)
++.+...+...+.+.+.+.. .+....+..|.+|+++|+++.++.+.
T Consensus 81 ---~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~ 126 (379)
T TIGR00881 81 ---TSLWVMAALWALNGIFQGMG-WPPCGRTVTKWFSRSERGTWVSFWNC 126 (379)
T ss_pred ---hhHHHHHHHHHHHHhhcccc-CCchHHHHHHhcCHhhheeeEeehhc
Confidence 22344444555555554433 34446677899999999876665443
No 134
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.88 E-value=6e-08 Score=95.46 Aligned_cols=130 Identities=15% Similarity=0.128 Sum_probs=94.4
Q ss_pred HHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHH
Q 017823 176 MAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVM 255 (365)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~ 255 (365)
.......+..........+..|.+.++.|.++.+.. ...+...++..++.++.|+++||+|||+.+..+.+...++...
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~-~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~ 99 (426)
T PRK12307 21 FSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGA-FLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGL 99 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 333333333333444455566777788999999988 8889999999999999999999999999999999998888877
Q ss_pred HHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 256 IGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.... +..+...+.-.+.+.+.+.. .+....+..|.+|+++|+++.++....
T Consensus 100 ~~~~-------------~~~~~l~~~r~l~G~g~g~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~ 150 (426)
T PRK12307 100 SGLA-------------SGVIMLTLSRFIVGMGMAGE-YACASTYAVESWPKHLKSKASAFLVSG 150 (426)
T ss_pred HHHH-------------hHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHhCCHhHhhHhhhHHHHH
Confidence 6665 22344445555555554433 333455668999999999988886655
No 135
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.87 E-value=1.2e-08 Score=98.18 Aligned_cols=129 Identities=16% Similarity=0.158 Sum_probs=104.7
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
++++.++.+.+++.+.......++.++.|++.||+|||+.+..+..+..+......+.++.+.+.+.+++.|++.+...+
T Consensus 228 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 307 (375)
T TIGR00899 228 HELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAG 307 (375)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677788999888887777888899999999999999998887776666655666677888888899999999888887
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
....++.|..|+ +++++.+..+....+|..+++.+++.+.+ ..||+..+
T Consensus 308 ---------------------------~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~---~~g~~~~~ 356 (375)
T TIGR00899 308 ---------------------------IGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAE---RWSYHAVY 356 (375)
T ss_pred ---------------------------HHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH---hccchhHH
Confidence 666777888765 56799999999999999999999988773 34566554
No 136
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.87 E-value=1.7e-08 Score=98.38 Aligned_cols=133 Identities=12% Similarity=0.099 Sum_probs=96.2
Q ss_pred HHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHH
Q 017823 173 QFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVS 252 (365)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~ 252 (365)
|++.......++...+........|.+.++.|.++.+.+ .......++..++.++.|+++||+|||+.+..+.+...++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~ 81 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLH-IAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIA 81 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHH
Confidence 344555555555555556666778888899999999888 8888889999999999999999999999999988888877
Q ss_pred HHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 253 RVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
....... ++.+...+...+.+.+.+... +....+..|.+|+++|+++.++.+..
T Consensus 82 ~~~~~~~-------------~~~~~~~~~~~l~g~~~~~~~-~~~~~~i~~~~~~~~r~~~~~~~~~~ 135 (392)
T PRK10473 82 SLLCSLA-------------ETSSLFLAGRFLQGIGAGCCY-VVAFAILRDTLDDRRRAKVLSLLNGI 135 (392)
T ss_pred HHHHHHh-------------CcHHHHHHHHHHHHhhhhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 7766553 112233333344444433322 33455668999999999998887765
No 137
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.87 E-value=1.3e-08 Score=99.50 Aligned_cols=121 Identities=13% Similarity=0.080 Sum_probs=105.8
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhh
Q 017823 11 SKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVS 90 (365)
Q Consensus 11 ~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~ 90 (365)
.|++..+.+.+.+...++..++.++.|++.||+|||+.+..+.....++..+..+.++.+.+.+.-++.|++.+...+
T Consensus 250 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-- 327 (406)
T PRK11551 250 QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQS-- 327 (406)
T ss_pred CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHH--
Confidence 477788999999999999999999999999999999999887777777766667777887787888888888877777
Q ss_pred hhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccc
Q 017823 91 VWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKI 158 (365)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 158 (365)
....+..|..|+++|++..++.+....+|..+++.+.+.+.+.
T Consensus 328 -------------------------~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~ 370 (406)
T PRK11551 328 -------------------------VLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLAL 370 (406)
T ss_pred -------------------------HHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhcc
Confidence 7777889999999999999999999999999999999888743
No 138
>PRK12382 putative transporter; Provisional
Probab=98.86 E-value=6.2e-09 Score=101.47 Aligned_cols=122 Identities=15% Similarity=0.115 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhhhhhhh
Q 017823 17 LLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSVWLFYF 96 (365)
Q Consensus 17 ~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~ 96 (365)
+.+...+.+.++..+++++.|++.||+|||+.+..+..+..++.++..+.++.+.+++++++.|++.+...+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~-------- 321 (392)
T PRK12382 250 MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFP-------- 321 (392)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHH--------
Confidence 345566677788899999999999999999999999988888888888888888888999999999998888
Q ss_pred cccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 97 SQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
.....+.|..|+++|++..++.+....+|..+++.+.+.+.+ ..||+..+
T Consensus 322 -------------------~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~---~~g~~~~~ 371 (392)
T PRK12382 322 -------------------ALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLAT---SFGYPSVF 371 (392)
T ss_pred -------------------HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCchHHH
Confidence 667777899999999999999999999999999999988874 34576665
No 139
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.85 E-value=1.4e-08 Score=99.21 Aligned_cols=121 Identities=14% Similarity=0.049 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhhhhhhhc
Q 017823 18 LTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSVWLFYFS 97 (365)
Q Consensus 18 ~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~ 97 (365)
.+.+.++..++..++.+..|++.||+|||+.+..+..+..++.+...+.++.+.+.+.+++.|++.+...+
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------- 330 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLP--------- 330 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHH---------
Confidence 45666677788889999999999999999999998888888887777788888899999999999999888
Q ss_pred ccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 98 QTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
....++.+..|+++||+..+..+....+|..+|+.+++.+. +..||+..|
T Consensus 331 ------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~---~~~g~~~~f 380 (408)
T PRK09874 331 ------------------AVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAIS---ANYGFRAVF 380 (408)
T ss_pred ------------------HHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHH---hhcchhHHH
Confidence 77777788889999999999999999999999999999887 334576654
No 140
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.85 E-value=1.3e-08 Score=99.45 Aligned_cols=122 Identities=18% Similarity=0.155 Sum_probs=103.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhhhhhhh
Q 017823 17 LLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSVWLFYF 96 (365)
Q Consensus 17 ~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~ 96 (365)
+.++..+.+.++..++.++.|++.||+|||+.+..+..+..++.++..+.++.+.+++.+++.|++.+...+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~-------- 321 (399)
T PRK05122 250 GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFP-------- 321 (399)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHH--------
Confidence 445666778888999999999999999999999988888888888888888888888999999999998888
Q ss_pred cccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 97 SQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
.......|..|+++|+++.++.+....+|..+++.+.+.+.+ ..||+..+
T Consensus 322 -------------------~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~---~~g~~~~~ 371 (399)
T PRK05122 322 -------------------ALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVAS---WFGYPSIF 371 (399)
T ss_pred -------------------HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HcCHHHHH
Confidence 666667788999999999999999999999988888777763 34566544
No 141
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.84 E-value=5.4e-08 Score=97.08 Aligned_cols=117 Identities=13% Similarity=0.067 Sum_probs=84.6
Q ss_pred hhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 017823 192 ISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFS 271 (365)
Q Consensus 192 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 271 (365)
.....|.+.++ |.+..+.+ ...+...++..++.++.|+++||+|||+.+..+.++..++.+.+..... .
T Consensus 48 ~~~~~p~l~~~-g~s~~~~g-~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~---------~ 116 (452)
T PRK11273 48 FALAMPYLVEQ-GFSRGDLG-FALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPW---------A 116 (452)
T ss_pred HHHhhHHHHHc-CCCHHHHH-HHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhc---------c
Confidence 34556776666 99999998 8899999999999999999999999999999998888888776665410 0
Q ss_pred hhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 272 IGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
..+.+...+...+.+++.+..+.+.. ....|.+|+++|+++.++.+..
T Consensus 117 ~~~~~~~~~~~~l~gi~~g~~~~~~~-~~~~~~~~~~~r~~~~~~~~~~ 164 (452)
T PRK11273 117 TSSIAVMFVLLFLCGWFQGMGWPPCG-RTMVHWWSQKERGGIVSVWNCA 164 (452)
T ss_pred cccHHHHHHHHHHHHHHHhccchHHH-HHHHHhCChHHHHHHHHHHHHH
Confidence 11233334444455555554444443 3457899999999998876544
No 142
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.83 E-value=1.4e-08 Score=96.91 Aligned_cols=120 Identities=15% Similarity=0.033 Sum_probs=108.6
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHhhcchhhhhhh
Q 017823 11 SKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFN-IYMLIFGRVLLGVGIGFANQV 89 (365)
Q Consensus 11 ~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~-~~~~~~~r~l~G~~~g~~~~~ 89 (365)
++.+..+.+.+.+...++..++.++.+++.||+|||+.+..+..+.+++.....+.++ ++.+.+..++.|++.+...+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~- 320 (365)
T TIGR00900 242 LGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINV- 320 (365)
T ss_pred hCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHH-
Confidence 5777899999999999999999999999999999999998888888888777777774 88888999999999999988
Q ss_pred hhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcc
Q 017823 90 SVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQK 157 (365)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~ 157 (365)
....++.|..|+++|++..+..+....+|..+++.+++.+.+
T Consensus 321 --------------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 321 --------------------------PQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred --------------------------HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888889999999999999999999999999999999888763
No 143
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.81 E-value=1.9e-08 Score=96.89 Aligned_cols=123 Identities=11% Similarity=0.037 Sum_probs=98.0
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHH--HHHHH--hhhHHHHHHHHHHhhcchh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGS--ALRGA--AFNIYMLIFGRVLLGVGIG 84 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~--~~~~~--a~~~~~~~~~r~l~G~~~g 84 (365)
++.+.+..+.+...+...++..++.++.|++.||+|||+.+.....+..+.. ....+ .++.+.+....++.|++.+
T Consensus 248 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 327 (394)
T TIGR00883 248 QTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGG 327 (394)
T ss_pred HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence 3456778899999999999999999999999999999998775554443333 22222 2466777788889999888
Q ss_pred hhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhH-HHHHHHHHHHHHHHHhhhhccc
Q 017823 85 FANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIG-FQVCVATAVLSANLLNYGTQKI 158 (365)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~-~~~~~~~g~~i~~~~~~~~~~~ 158 (365)
...+ ....++.|.+|+++|+++.+. .+.+..+|..++|.+++.+.+.
T Consensus 328 ~~~~---------------------------~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~ 375 (394)
T TIGR00883 328 MYTG---------------------------PMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAM 375 (394)
T ss_pred HHhh---------------------------hHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHH
Confidence 8888 888889999999999999987 4566778898999999888744
No 144
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.81 E-value=3e-08 Score=96.60 Aligned_cols=121 Identities=9% Similarity=0.077 Sum_probs=111.2
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQV 89 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~ 89 (365)
+.|.++++.|...+...++..++.++.+++.||+|+|+.+..+.+...+..+..++++|++.++..+++.|+..+...+
T Consensus 234 ~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~- 312 (382)
T TIGR00902 234 AAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHL- 312 (382)
T ss_pred HCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHH-
Confidence 3678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHH-HHHHHHHHHHHHHhhhhccc
Q 017823 90 SVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQ-VCVATAVLSANLLNYGTQKI 158 (365)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~-~~~~~g~~i~~~~~~~~~~~ 158 (365)
....++.+. |+++|++..+.++ ...++|..+++.+++.+.+.
T Consensus 313 --------------------------~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~ 355 (382)
T TIGR00902 313 --------------------------AAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPT 355 (382)
T ss_pred --------------------------HHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888888888 8999999999986 57889999999999998843
No 145
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.77 E-value=1e-07 Score=92.87 Aligned_cols=118 Identities=10% Similarity=-0.052 Sum_probs=88.2
Q ss_pred cccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCC
Q 017823 188 RINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDH 267 (365)
Q Consensus 188 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 267 (365)
.........|.+.++.|.+.++.+ ...+...++..++.++.|++.||+|||+.+..+..+..++.++....
T Consensus 18 ~~~~~~~~l~~~~~~~g~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~-------- 88 (382)
T PRK10091 18 AEFGIMGVLTELAHDVGISIPAAG-HMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS-------- 88 (382)
T ss_pred hHHHHHhChHHHHHHcCCCHHHHh-HHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh--------
Confidence 334555577888899999999988 89999999999999999999999999999999998888888776664
Q ss_pred CCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 268 GGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
++.+...+...+.+.+.+... +.......|.+|+++|+++.++....
T Consensus 89 -----~~~~~l~~~r~l~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (382)
T PRK10091 89 -----SSYLMLAIGRLVSGFPHGAFF-GVGAIVLSKIIKPGKVTAAVAGMVSG 135 (382)
T ss_pred -----CcHHHHHHHHHHHHhhhHHHH-HHHHHHHHHhCChHHhhHHHHHHHHH
Confidence 223444444455555444332 33345568899999998888765543
No 146
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.77 E-value=3e-08 Score=99.66 Aligned_cols=129 Identities=9% Similarity=-0.120 Sum_probs=98.7
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHhhcchhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA--FNIYMLIFGRVLLGVGIGFA 86 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a--~~~~~~~~~r~l~G~~~g~~ 86 (365)
++.|++..+.+++.+...++..++.++.|+++||+|||+.+..+..+..+..+..... .+.+.+....++.+......
T Consensus 304 ~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (496)
T PRK03893 304 TDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGI 383 (496)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhccc
Confidence 4677889999999999999999999999999999999999888877666655443333 33444444455444333333
Q ss_pred hhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHH
Q 017823 87 NQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRI 166 (365)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~ 166 (365)
.+ ..+.++.|..|+++|++.+++.+....+|..+|+.+++.+.+ ..||+.
T Consensus 384 ~~---------------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~---~~g~~~ 433 (496)
T PRK03893 384 SG---------------------------LLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQ---RLDLGT 433 (496)
T ss_pred ch---------------------------hhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhc---cCChHH
Confidence 44 556678899999999999999999999999999999998884 345654
Q ss_pred H
Q 017823 167 S 167 (365)
Q Consensus 167 ~ 167 (365)
.
T Consensus 434 ~ 434 (496)
T PRK03893 434 A 434 (496)
T ss_pred H
Confidence 4
No 147
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.77 E-value=6.4e-08 Score=96.11 Aligned_cols=117 Identities=14% Similarity=0.055 Sum_probs=82.7
Q ss_pred hhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 017823 192 ISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFS 271 (365)
Q Consensus 192 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 271 (365)
.....|.+.+ .|.++++.+ +..+...++..++.++.|+++||+|||+.+..+.++..++.+...... ..
T Consensus 46 ~~~~~p~~~~-~g~s~~~~g-~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--------~~- 114 (438)
T TIGR00712 46 FALAMPYLVE-QGFSKGELG-FALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVP--------WA- 114 (438)
T ss_pred HHhhhHHHHH-cCCCHhHhH-HHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccc--------cc-
Confidence 3445665554 699999998 899999999999999999999999999998888877777766654431 00
Q ss_pred hhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 272 IGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
..+.+...+...+.+++.+..+.+. .....|.+|+++|+++.++.+..
T Consensus 115 ~~~~~~l~~~~~l~g~~~g~~~~~~-~~~i~~~~~~~~rg~~~~~~~~~ 162 (438)
T TIGR00712 115 TSSIAIMFVLLFLNGWFQGMGWPPC-GRTMVHWWSQSERGTIVSIWNCA 162 (438)
T ss_pred cchHHHHHHHHHHHHHHhhcchHHH-HHHHHHhcCcccchhHHHHHHHH
Confidence 1122233333444455555444444 34457999999999999987665
No 148
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.76 E-value=1.4e-09 Score=110.60 Aligned_cols=220 Identities=17% Similarity=0.120 Sum_probs=3.0
Q ss_pred ccCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh------------------
Q 017823 6 NISNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAF------------------ 67 (365)
Q Consensus 6 ~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~------------------ 67 (365)
.+++.+++++++.|++.+.+-++..+..++..++.+|..|-|.+-.+.++.++|+++.++-+
T Consensus 28 tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~ 107 (539)
T PF03137_consen 28 TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNS 107 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccc
Confidence 35677888899999999999999999999999999999999999999999999998876510
Q ss_pred --------------------------------hHHHHHHHHHHhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhccc
Q 017823 68 --------------------------------NIYMLIFGRVLLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQ 115 (365)
Q Consensus 68 --------------------------------~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (365)
-++.++++.++.|+|....++
T Consensus 108 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~t--------------------------- 160 (539)
T PF03137_consen 108 SISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYT--------------------------- 160 (539)
T ss_dssp --------------------------------------------SSS---------------------------------
T ss_pred ccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcc---------------------------
Confidence 136788899999999999999
Q ss_pred ccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccC---------------Ccc----hHHHH--------
Q 017823 116 SVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKV---------------GWG----WRISL-------- 168 (365)
Q Consensus 116 ~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~---------------~~g----wr~~f-------- 168 (365)
...+|+-|..++|+-+...|+......+|.++|.++++...+... +.. |-.-|
T Consensus 161 LG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~ 240 (539)
T PF03137_consen 161 LGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLF 240 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988876653211 111 22222
Q ss_pred ------------------------------------------------------------HhHHHHHHHHHHHHHHhccc
Q 017823 169 ------------------------------------------------------------KYRLQFVMAILIPFFQHVTR 188 (365)
Q Consensus 169 ------------------------------------------------------------~~~~~~~~~~~~~~~~~~~~ 188 (365)
..+++.++...+........
T Consensus 241 l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~ 320 (539)
T PF03137_consen 241 LSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFI 320 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHH
Confidence 12334455555555555667
Q ss_pred ccchhhcHHHHH-HHcCCCcchhhHHHHH-HHHHHHHHHHHHHHHHHhhhCc--chHHHHhHHHHHHHH
Q 017823 189 INVISFYAPVLF-RTIKLSESTSLLMSAI-VTGSLGTISTSLSMILADRLGR--KVLFLVGGIQMLVSR 253 (365)
Q Consensus 189 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~g~l~dr~gr--r~~l~~~~~~~~i~~ 253 (365)
......|.|.|+ .+++.+++.+. .+.. +.--+..+|.+++|++.+|++- |+.+....+...++.
T Consensus 321 ~~G~~tF~pKylE~QF~~sas~A~-~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~ 388 (539)
T PF03137_consen 321 VSGFATFLPKYLESQFGLSASQAS-LLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSV 388 (539)
T ss_dssp ---------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHH-HHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHH
Confidence 778888999999 56788888887 4443 3334677899999999999853 444444444444433
No 149
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.76 E-value=1.9e-07 Score=91.50 Aligned_cols=112 Identities=10% Similarity=0.061 Sum_probs=87.6
Q ss_pred hcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchh
Q 017823 194 FYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIG 273 (365)
Q Consensus 194 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 273 (365)
...|.+.++.|.++++.+ ...+...+...+++++.|.++||+|||+.+..+.++..++.+..... +
T Consensus 41 ~~l~~~~~~~g~s~~~~g-~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~-------------~ 106 (394)
T PRK10213 41 SLLTPMAQDLGISEGVAG-QSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFA-------------N 106 (394)
T ss_pred hhHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHH-------------C
Confidence 346777789999999998 88888999999999999999999999999999999988877776554 2
Q ss_pred hHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 274 YAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+.+..++...+.+.+.+.. .|....+++|.+|+++|+++.++....
T Consensus 107 ~~~~l~~~r~l~G~~~g~~-~~~~~~~i~~~~~~~~~~~a~~~~~~~ 152 (394)
T PRK10213 107 SFSLLLIGRACLGLALGGF-WAMSASLTMRLVPPRTVPKALSVIFGA 152 (394)
T ss_pred hHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHcCHhHHHHHHHHHHHH
Confidence 3444555555555555443 344556668999999999999887765
No 150
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.76 E-value=9.4e-08 Score=94.71 Aligned_cols=122 Identities=15% Similarity=0.190 Sum_probs=106.3
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hHHHHHHHHHHHHHHHHH-HHh---h-hHHHHHHHHHHhhcc
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGR-KASILVRSTAFLAGSALR-GAA---F-NIYMLIFGRVLLGVG 82 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Gr-k~~l~~~~~~~~~~~~~~-~~a---~-~~~~~~~~r~l~G~~ 82 (365)
-|.+-+.+..|++.++..++.+++++..|+...|.++ |+.++.+..+..+|+++. +.. + .-+.++++|++.|+|
T Consensus 64 lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg 143 (488)
T KOG2325|consen 64 LDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVG 143 (488)
T ss_pred cCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcC
Confidence 3466678999999999999999999999999999997 888999999999999988 333 3 578999999999999
Q ss_pred hhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccc
Q 017823 83 IGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKI 158 (365)
Q Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 158 (365)
.|.... .-.|+++...+++|.++.+....+..+|..+||.++..+...
T Consensus 144 ~~n~a~----------------------------lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~L 191 (488)
T KOG2325|consen 144 VGNFAV----------------------------LRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPL 191 (488)
T ss_pred cccHHH----------------------------HHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhh
Confidence 887765 778888888899999999999999999999999988776543
No 151
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.75 E-value=8.8e-08 Score=95.77 Aligned_cols=120 Identities=18% Similarity=0.172 Sum_probs=92.1
Q ss_pred cccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcC
Q 017823 186 VTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIG 265 (365)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~ 265 (365)
...........|.+.++.|.++++.+ +..+...++..++.++.|+++||+|||+.+..+..+..++.+.....
T Consensus 15 ~~~~~~~~~~~p~~~~~~g~s~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~------ 87 (485)
T TIGR00711 15 VLDSTIVNVAIPTIAGDLGSSLSQVQ-WVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVA------ 87 (485)
T ss_pred HHHHHHHHHHHHHHHHhcCCChhhhh-HHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCc------
Confidence 33445566678999999999999888 89999999999999999999999999999999988888877766543
Q ss_pred CCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 266 DHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
++.+..++...+.+.+.+. ..+....+..|.+|+++|+++.++....
T Consensus 88 -------~~~~~l~~~~~~~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~ 134 (485)
T TIGR00711 88 -------PNLELMIIFRVIQGFGGGP-LIPLSFSTLLNIYPPEKRGRAMAIWGLT 134 (485)
T ss_pred -------CCHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 2233444444554554433 3445566778999999999999987665
No 152
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.75 E-value=2.8e-07 Score=92.20 Aligned_cols=114 Identities=14% Similarity=0.034 Sum_probs=78.2
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHH
Q 017823 204 KLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLIC 283 (365)
Q Consensus 204 g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (365)
+.++.+.+ ...+...++..++.++.|+++||+|||+.+..+..+..++.+............ ...+.......++.-+
T Consensus 51 ~~~~~~~~-~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~R~ 128 (479)
T PRK10077 51 SAANSLLG-FCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSI-GPDNTGYVPEFVIYRI 128 (479)
T ss_pred cCChhHHH-HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccc-cccchhHHHHHHHHHH
Confidence 67778888 889999999999999999999999999999999888877776665421000000 0001111223344445
Q ss_pred HHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 284 VYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+.+++.+... +....+.+|.+|+++|+++.++....
T Consensus 129 l~G~~~g~~~-~~~~~~i~e~~~~~~rg~~~~~~~~~ 164 (479)
T PRK10077 129 IGGIGVGLAS-MLSPMYIAEIAPAHIRGKLVSFNQFA 164 (479)
T ss_pred HHhhhHhHHh-hHHHHHHHhhCChhhhhHHHHHHHHH
Confidence 5555554433 34456679999999999988886554
No 153
>PRK03699 putative transporter; Provisional
Probab=98.75 E-value=1.7e-07 Score=91.72 Aligned_cols=116 Identities=11% Similarity=-0.017 Sum_probs=86.5
Q ss_pred ccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCC
Q 017823 189 INVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHG 268 (365)
Q Consensus 189 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 268 (365)
........|.+.++.|.++++.+ ...+...++..++.++.|++.||+|||+.+..+..+..++.+.....
T Consensus 23 ~~~~g~~~~~i~~~~~~s~~~~g-~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~--------- 92 (394)
T PRK03699 23 VIVTGMVMGPIAEYFNLPVSSMS-NTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFS--------- 92 (394)
T ss_pred HHHHhhhhHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc---------
Confidence 44555667888899999999998 88888999999999999999999999999998888777777666553
Q ss_pred CCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHH
Q 017823 269 GFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVA 319 (365)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 319 (365)
++.+...+...+.+.+.+...+. ...+..|.+|+++|+++.+..+.
T Consensus 93 ----~~~~~~~~~~~l~G~~~g~~~~~-~~~~i~~~~~~~~r~~~~~~~~~ 138 (394)
T PRK03699 93 ----HSLALFSIAMFVLGVVSGITMSI-GTFLITHVYEGKQRGSRLLFTDS 138 (394)
T ss_pred ----chHHHHHHHHHHHHHhhHhhccc-hhHHhhhhcccchHHHHHHHHHH
Confidence 22334444455555555444433 34556899999999988776543
No 154
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.75 E-value=4e-08 Score=95.63 Aligned_cols=125 Identities=12% Similarity=0.052 Sum_probs=99.9
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhh
Q 017823 11 SKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVS 90 (365)
Q Consensus 11 ~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~ 90 (365)
.+.+.++.+...+...++..+++++.|++.||+|||+.+..+..+..++..... + ........++.|++.....|
T Consensus 230 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~~~~p-- 304 (381)
T PRK03633 230 QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAGFTLYP-- 304 (381)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHHhHHH--
Confidence 467788999999999999999999999999999999999888877777655432 2 23344577788887777777
Q ss_pred hhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 91 VWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
.....+.|..|+++++...+......++|..+||.+++.+.+. .+|+..|
T Consensus 305 -------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~---~g~~~~f 354 (381)
T PRK03633 305 -------------------------VAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQN---YSDNLLF 354 (381)
T ss_pred -------------------------HHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCccHHH
Confidence 7777788999888888888888889999999999999988743 3455443
No 155
>PRK03545 putative arabinose transporter; Provisional
Probab=98.74 E-value=7.3e-08 Score=94.01 Aligned_cols=128 Identities=15% Similarity=0.103 Sum_probs=100.3
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHH-HHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGS-ALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~-~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
++.|.|..+.+++.+...++..+++++.|++.||+|||+... +..+..++. .+....++.+.+.++.++.|++.+...
T Consensus 234 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~ 312 (390)
T PRK03545 234 QVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIG 312 (390)
T ss_pred HhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcch
Confidence 346778899999999999999999999999999999887654 444333333 334556778888889999999877666
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
+ .....+.|..| ++|+++++.......+|..+|+.+++.+. ++.|++..
T Consensus 313 ~---------------------------~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~---~~~g~~~~ 361 (390)
T PRK03545 313 L---------------------------AMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVS---LHLGLSSI 361 (390)
T ss_pred H---------------------------HHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHH---hccChhHH
Confidence 6 45556667765 68899999999999999999999999888 44567766
Q ss_pred H
Q 017823 168 L 168 (365)
Q Consensus 168 f 168 (365)
+
T Consensus 362 ~ 362 (390)
T PRK03545 362 G 362 (390)
T ss_pred H
Confidence 5
No 156
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.73 E-value=7.5e-08 Score=97.13 Aligned_cols=119 Identities=15% Similarity=0.114 Sum_probs=88.6
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH---HHHhhhHHHHHHHHHHhhcchhhh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSAL---RGAAFNIYMLIFGRVLLGVGIGFA 86 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~---~~~a~~~~~~~~~r~l~G~~~g~~ 86 (365)
+.|++..+.+...+...++..++.++.|+++||+|||+.+..+.++..++... ...+++...+.++|++.|++.+..
T Consensus 280 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 359 (490)
T PRK10642 280 NLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCF 359 (490)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 35666777788888888999999999999999999999988877654433332 223355777888999998877766
Q ss_pred hhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhH-HHHHHHHHHHHHHHHhhhhc
Q 017823 87 NQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIG-FQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~-~~~~~~~g~~i~~~~~~~~~ 156 (365)
.. ....++.|.+|++.|+...+. ++.+. ++..++|.+...+.
T Consensus 360 ~g---------------------------~~~~~~~~~~p~~~Rg~~~g~~~~~~~-~~g~~~p~i~g~l~ 402 (490)
T PRK10642 360 TG---------------------------VMASTLPAMFPTHIRYSALAAAFNISV-LVAGLTPTLAAWLV 402 (490)
T ss_pred HH---------------------------HHHHHHHHHCCCccchHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 66 566677899999999999887 45544 44456666665554
No 157
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.72 E-value=4.3e-08 Score=96.49 Aligned_cols=121 Identities=11% Similarity=0.038 Sum_probs=107.4
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQV 89 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~ 89 (365)
..|.++.+.+++.+...++..++.++.+++.||.++|+.+..+..+..++.++..+.++.+...++.++.|++.+...+
T Consensus 253 ~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~- 331 (417)
T PRK10489 253 VWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSL- 331 (417)
T ss_pred ccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHH-
Confidence 3677789999999999999999999999999998888888888888888888888888888888899999998888777
Q ss_pred hhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcc
Q 017823 90 SVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQK 157 (365)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~ 157 (365)
...+++.|..|+++||+++++......+|..+|+.+.+.+.+
T Consensus 332 --------------------------~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~ 373 (417)
T PRK10489 332 --------------------------LQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGA 373 (417)
T ss_pred --------------------------HHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHH
Confidence 666778899999999999999999999999999999988874
No 158
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.72 E-value=2.3e-07 Score=89.87 Aligned_cols=131 Identities=15% Similarity=0.104 Sum_probs=106.4
Q ss_pred HHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHH
Q 017823 175 VMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRV 254 (365)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~ 254 (365)
++.+.+..|...+......-..|.+.+++|.++..++ ...+.+..+..+++++...+.||+.||++++....++.++.+
T Consensus 15 l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG-~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~ 93 (394)
T COG2814 15 LLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAG-QLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNL 93 (394)
T ss_pred HHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHH
Confidence 3344444444456667777789999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 255 MIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+..+. ++.....+.-.+.+...+..|+ +...+..++.|+++|+++.++...-
T Consensus 94 l~alA-------------p~f~~Ll~aR~~~g~a~G~f~~-i~~~~a~~lvpp~~~~~Aiaiv~~G 145 (394)
T COG2814 94 LSALA-------------PSFAVLLLARALAGLAHGVFWS-IAAALAARLVPPGKRGRALALVFTG 145 (394)
T ss_pred HHHHh-------------ccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCccchhhHHHHHHHH
Confidence 98886 3345556666666666655444 4467779999999999999988876
No 159
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.72 E-value=6.1e-08 Score=97.11 Aligned_cols=122 Identities=14% Similarity=-0.027 Sum_probs=91.5
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH--HHHhhhHHHHHHHHHHhhcchhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSAL--RGAAFNIYMLIFGRVLLGVGIGFA 86 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~--~~~a~~~~~~~~~r~l~G~~~g~~ 86 (365)
+++|+|..+.++..+...++..++.++.|+++||+|||+.+.....+..++..+ ....++.+...+.+++.|+.....
T Consensus 287 ~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 366 (467)
T PRK09556 287 QELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGP 366 (467)
T ss_pred HccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhH
Confidence 456788999999999999999999999999999999998876654444433322 223356666778888888654333
Q ss_pred hhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHH-HHHHHHHHhhhhcc
Q 017823 87 NQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVAT-AVLSANLLNYGTQK 157 (365)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~-g~~i~~~~~~~~~~ 157 (365)
.. .......|..|+++||.+.++.+....+ |..+++.+.+.+.+
T Consensus 367 ~~---------------------------~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 367 QL---------------------------LIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred HH---------------------------HHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 32 2224456999999999999999888776 77888888888876
No 160
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.71 E-value=5.6e-08 Score=93.94 Aligned_cols=113 Identities=16% Similarity=0.056 Sum_probs=86.3
Q ss_pred hhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCch
Q 017823 193 SFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSI 272 (365)
Q Consensus 193 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 272 (365)
....|.+.++.|.++++.+ ...+...++..++.++.|+++||+|||+.+..+.++..++.......
T Consensus 11 ~p~~~~~~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~------------- 76 (377)
T PRK11102 11 LPALPVIAADFGVSAGSVQ-MTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA------------- 76 (377)
T ss_pred hccHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH-------------
Confidence 3467788888999999998 88899999999999999999999999999999988888888777654
Q ss_pred hhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 273 GYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
++.+...+...+.+++.+.. .+....+..|.+|+++|+++.++.+..
T Consensus 77 ~~~~~~~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (377)
T PRK11102 77 QTIDQLIYMRFLHGLAAAAA-SVVINALMRDMFPKEEFSRMMSFVTLV 123 (377)
T ss_pred ccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 12233344444444444332 333455668999999999999887665
No 161
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.69 E-value=9.5e-08 Score=90.75 Aligned_cols=116 Identities=20% Similarity=0.221 Sum_probs=87.4
Q ss_pred cchhhcHH-HHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCC
Q 017823 190 NVISFYAP-VLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHG 268 (365)
Q Consensus 190 ~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 268 (365)
.......| .+.++.|.++.+.+ ...+...+...++.++.|+++||+|||+.+..+.++..++.+...+.
T Consensus 13 ~~~~~~~~~~~~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~--------- 82 (352)
T PF07690_consen 13 SIISPALPLYLAEELGLSPSQIG-LLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA--------- 82 (352)
T ss_dssp HHHHHHHH-HHHCCSTTTSHCHH-HHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred HHHHHHHHHHHHHccCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh---------
Confidence 34445566 56678899999999 89999999999999999999999999999999988888884444432
Q ss_pred CCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 269 GFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
++.+..++..++.+.+.+.. .+....+..|.+|+++|+++.++....
T Consensus 83 ----~~~~~~~~~~~l~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~ 129 (352)
T PF07690_consen 83 ----SNFWLLLIARFLLGIGSGFF-SPASNALIADWFPPEERGRAFGILSAG 129 (352)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCTCCHHHHHHHHHHH
T ss_pred ----hhHHHHhhhccccccccccc-cccccccccccchhhhhhhccccccch
Confidence 11334555555666655443 344456678999999999999988887
No 162
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.69 E-value=1.6e-06 Score=85.74 Aligned_cols=265 Identities=19% Similarity=0.188 Sum_probs=162.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhhhhhhhccccc
Q 017823 22 TSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSVWLFYFSQTCD 101 (365)
Q Consensus 22 ~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~ 101 (365)
.++.+..+.+.+++++.+.|+.|.|+.++++......-....-+ +|-+.++++-++.|+|.+..+.
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~------------- 121 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWT------------- 121 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheec-------------
Confidence 77888899999999999999999999999999998877666544 5577899999999999999888
Q ss_pred chhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccC-----CcchH-----------
Q 017823 102 LLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKV-----GWGWR----------- 165 (365)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~-----~~gwr----------- 165 (365)
.--.|++|..+++++.+..++.......+.++|...-.......+ ..+-+
T Consensus 122 --------------GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (461)
T KOG3098|consen 122 --------------GQGGYLTSNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDF 187 (461)
T ss_pred --------------ccceehhhcCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhH
Confidence 888899999999999999988888777777777665544332211 11111
Q ss_pred ---HHH----------------------------H--------------hHHHHHHHHHHHHHHhccc-ccchhhcHHHH
Q 017823 166 ---ISL----------------------------K--------------YRLQFVMAILIPFFQHVTR-INVISFYAPVL 199 (365)
Q Consensus 166 ---~~f----------------------------~--------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 199 (365)
..+ . .+.+.++.+...++..... ......|...+
T Consensus 188 ~i~~~~~v~~~~~~l~~i~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i 267 (461)
T KOG3098|consen 188 EIKVLFGVLLAISVLSIINFDFLPSKDVVNCKSSSETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCI 267 (461)
T ss_pred HHHHHHHHHHHHHHHHhhheeecCccchhhhhhhccccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhh
Confidence 001 0 0001112222222211111 11111122222
Q ss_pred H--HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhh---hCcchHHHHhHHHHHHHHHHHHHHHhhhcC----CCCC-
Q 017823 200 F--RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADR---LGRKVLFLVGGIQMLVSRVMIGSIMADQIG----DHGG- 269 (365)
Q Consensus 200 ~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr---~grr~~l~~~~~~~~i~~~~~~~~~~~~~~----~~~~- 269 (365)
. +..+.+............+.+..++....+.+.+| +||++.+.++.++-.+..++.-.....+.. +..+
T Consensus 268 ~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~ 347 (461)
T KOG3098|consen 268 SFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPL 347 (461)
T ss_pred hhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCccccc
Confidence 1 23444444433356667778888888888888755 578888888887777777776665432221 1111
Q ss_pred CchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHH
Q 017823 270 FSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQII 316 (365)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~ 316 (365)
...+......++..+.+.+-+ .+....+.+....+|+ .|..+.++
T Consensus 348 ~~~~~~~~~~ii~~l~G~~D~-~~~t~~~~ii~~~~~~-~~~~~fsi 392 (461)
T KOG3098|consen 348 LFTPSYYLALIIGFLLGFGDA-CFNTQRYVIIALLYPD-DRAQAFSL 392 (461)
T ss_pred ccccchhHHHHHHHHHhhHHH-HHHHHHHHHHHHHhcC-chHHHHHH
Confidence 111123344555555555543 4455556666788854 45544433
No 163
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.69 E-value=2.7e-07 Score=93.24 Aligned_cols=131 Identities=16% Similarity=0.094 Sum_probs=93.4
Q ss_pred HHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHH
Q 017823 175 VMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRV 254 (365)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~ 254 (365)
+..+.+..+....-......-.|.+.+++|.+.++.. +..+.+.++...+.++.|+++||+|||+.+..+..+..++.+
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~-~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~ 86 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELL-WIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASL 86 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHH-HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 3334444444344445566678999999999998888 888899999999999999999999999999999999888888
Q ss_pred HHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccC-CChhhhhHHHHHHHHH
Q 017823 255 MIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSEN-FPLEIISAGQIITVAA 320 (365)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~-~p~~~r~~~~~~~~~~ 320 (365)
..+.. ++.+..++.-.+.+.+.+.. .|.......+. .|+++|+++.|+....
T Consensus 87 ~~~~a-------------~~~~~li~~r~l~G~g~~~~-~~~~~~~l~~~~~~~~~r~~~~g~~~~~ 139 (495)
T PRK14995 87 AAAFS-------------PTASWLIATRALLAIGAAMI-VPATLAGIRATFTEEKQRNMALGVWAAV 139 (495)
T ss_pred HHHHc-------------CCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 87764 22444455545555554433 23223333344 4789999998887666
No 164
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.67 E-value=1.6e-07 Score=91.55 Aligned_cols=115 Identities=22% Similarity=0.113 Sum_probs=96.1
Q ss_pred chhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCC
Q 017823 191 VISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGF 270 (365)
Q Consensus 191 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 270 (365)
.+..-.+..-+.+|.+++..+ ++.....+...+.+++.|++.||+.||+++.+|..+-.++.+..++.
T Consensus 51 ~iagv~~~v~~~fni~~s~~G-ll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs----------- 118 (493)
T KOG1330|consen 51 TIAGVLKEVQTYFNISDSELG-LLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFS----------- 118 (493)
T ss_pred hhhhhhHHHHHhcCCCchhcc-chhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH-----------
Confidence 333344455566799999999 99999999999999999999999999999999999999888888876
Q ss_pred chhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 271 SIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
...|..+++-.+-+.+-+ .+.|+...+++|.+|.++|++..++.+..
T Consensus 119 --~~Fwq~~l~R~~vGiGeA-s~~~ia~s~IaD~f~~~~Rs~~~~ify~~ 165 (493)
T KOG1330|consen 119 --NHFWQVLLCRGFVGIGEA-SYSPIAPSLIADSFPDDKRSRVLGIFYFA 165 (493)
T ss_pred --HHHHHHHHHHHHhccchh-hhcccchhHhhhcCcchhhhHHHHHhhhh
Confidence 446677777777777765 56677677789999999999999999988
No 165
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.65 E-value=4e-07 Score=89.35 Aligned_cols=122 Identities=15% Similarity=0.070 Sum_probs=84.1
Q ss_pred cccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCC
Q 017823 188 RINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDH 267 (365)
Q Consensus 188 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 267 (365)
+......+.|.+.++.|.++.+.+ ...+...++..++.++.|++.||+|||+.+..+..+..++.+.......
T Consensus 28 ~~~~~~~~~~~~~~~~g~s~~~~g-~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~------ 100 (402)
T TIGR00897 28 GDGLEQGWLSPFLKALGLSPQQSA-SAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGL------ 100 (402)
T ss_pred hhhhHHHhHHHHHHHhCCCHHHhH-HHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhc------
Confidence 333444567777888999999999 8899999999999999999999999999999988888777654432210
Q ss_pred CCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 268 GGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
...+.+...+...+.+.+.+.. .+.......|.+|+++|+++.|+.++.
T Consensus 101 ---~~~~~~~l~~~~~i~G~g~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~ 149 (402)
T TIGR00897 101 ---GHANYPLILLFYGIRGLGYPLF-AYSFLVWVVYNTKQDNLSSAVGWFWAV 149 (402)
T ss_pred ---cCccHHHHHHHHHHHHcchHHH-HhHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 1112233333344444443322 222233446889999999999886654
No 166
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.65 E-value=6.2e-07 Score=87.87 Aligned_cols=114 Identities=16% Similarity=0.095 Sum_probs=81.6
Q ss_pred hhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 017823 192 ISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFS 271 (365)
Q Consensus 192 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 271 (365)
.....|.+.+++|.++.+.. ...+...++..++.++.|+++||+|||+.+..+.....++.+.....
T Consensus 32 ~~~~~~~~~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~------------ 98 (406)
T PRK15402 32 IQPGMLAVVEDFNAGAEWVP-TSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLA------------ 98 (406)
T ss_pred HhcchHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH------------
Confidence 33345667788999998888 88889999999999999999999999999998888877777766554
Q ss_pred hhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 272 IGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
++.+...+...+.+.+.+.. .+.......|.+|++.|.++.++....
T Consensus 99 -~~~~~l~~~~~l~G~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~ 145 (406)
T PRK15402 99 -QSIEQFTLLRFLQGIGLCFI-GAVGYAAIQESFEEADAIKITALMANV 145 (406)
T ss_pred -ccHHHHHHHHHHHHhHhhhH-HHHHHHHHHHHhChhHHHHHHHHHHHH
Confidence 12233333344434433322 334455668999999988877766543
No 167
>PRK10504 putative transporter; Provisional
Probab=98.63 E-value=6.5e-07 Score=89.49 Aligned_cols=125 Identities=17% Similarity=0.151 Sum_probs=91.4
Q ss_pred HHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHH
Q 017823 181 PFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIM 260 (365)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~ 260 (365)
..+...........+.|.+.++.|.++.+.+ +..+...++..++.++.|+++||+|||+.+..+..+..++.+.....
T Consensus 18 ~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~- 95 (471)
T PRK10504 18 GFFMQSLDTTIVNTALPSMAQSLGESPLHMH-MVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALS- 95 (471)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHhCcCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHh-
Confidence 3333344455667789999999999999888 77788888889999999999999999999998877777776655443
Q ss_pred hhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 261 ADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
++.+..++...+.+.+.+.. .|.......|.+|+++|+++.++.+..
T Consensus 96 ------------~~~~~l~~~~~l~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (471)
T PRK10504 96 ------------GTLNELLLARVLQGVGGAMM-VPVGRLTVMKIVPREQYMAAMTFVTLP 142 (471)
T ss_pred ------------CCHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 12333444455555554433 344456668999999999998877654
No 168
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.63 E-value=5.4e-07 Score=86.53 Aligned_cols=119 Identities=14% Similarity=0.036 Sum_probs=88.1
Q ss_pred cccccchhhcHHH-HHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhc
Q 017823 186 VTRINVISFYAPV-LFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQI 264 (365)
Q Consensus 186 ~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~ 264 (365)
+........+.|. +.++.|.++.+.+ +......++..++.++.|+++||+|||+.+..+.++..++.+......
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~---- 88 (366)
T TIGR00886 14 FSVWFAFSPLAVQMIKDDLGLSTAQLG-NLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAV---- 88 (366)
T ss_pred HHHHHHhHHhhhHHHHHHhCCCHHHhh-HhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHh----
Confidence 3344556667785 6688999999999 899999999999999999999999999999999988888887776641
Q ss_pred CCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHH
Q 017823 265 GDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVA 319 (365)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 319 (365)
.+.+...+...+.+.+. ..+.+ ...+.+|.+|+++|+++.++...
T Consensus 89 --------~~~~~~~~~~~~~g~~~-~~~~~-~~~~~~~~~~~~~r~~~~~~~~~ 133 (366)
T TIGR00886 89 --------QSYSVLLLLRLFIGIAG-GSFAS-CMPWISFFFPKKIQGTALGLAAG 133 (366)
T ss_pred --------hhHHHHHHHHHHHHHhc-hhhHh-HHHHHHHhcCHhhhhHHHHHHHH
Confidence 02333344444444442 23333 34566899999999999888653
No 169
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.62 E-value=2.6e-07 Score=90.01 Aligned_cols=121 Identities=11% Similarity=0.105 Sum_probs=104.3
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQV 89 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~ 89 (365)
+.|.+..+.|.+.+...++..+..++.+++.||+|+|+.+..+.....++.++.+++++++.+++..++.|++.+...+
T Consensus 234 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~- 312 (382)
T PRK11128 234 AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHL- 312 (382)
T ss_pred HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH-
Confidence 3577788999999999999999999999999999999999999999888888888889999999999999999998888
Q ss_pred hhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHH-HHHHHHHHHHHHHhhhhccc
Q 017823 90 SVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQ-VCVATAVLSANLLNYGTQKI 158 (365)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~-~~~~~g~~i~~~~~~~~~~~ 158 (365)
....++.+. +++++++..+... ....+|..+|+.+++.+.+.
T Consensus 313 --------------------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~ 355 (382)
T PRK11128 313 --------------------------AAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQH 355 (382)
T ss_pred --------------------------HHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 777777776 5666788888875 56778889999999988843
No 170
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.61 E-value=7.5e-07 Score=87.93 Aligned_cols=111 Identities=14% Similarity=0.079 Sum_probs=81.7
Q ss_pred cHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhh
Q 017823 195 YAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGY 274 (365)
Q Consensus 195 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 274 (365)
-.|.+.++++.+..+.. ...+...++..++.++.|+++||+|||+.+..+..+..++.+..... ++
T Consensus 38 ~l~~i~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-------------~~ 103 (413)
T PRK15403 38 GIINVVRDFNADVSLAP-ASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT-------------TS 103 (413)
T ss_pred CHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc-------------CC
Confidence 34556678899999988 88899999999999999999999999999999888877777666553 22
Q ss_pred HHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 275 AYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.+..++.-.+.+.+.+. ..+..+....|.+|+++|+++.++.+..
T Consensus 104 ~~~l~~~r~l~Gi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (413)
T PRK15403 104 MTQFLIARFIQGTSICF-IATVGYVTVQEAFGQTKGIKLMAIITSI 148 (413)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 33344444444444332 2344456678999999998887765555
No 171
>PRK09952 shikimate transporter; Provisional
Probab=98.59 E-value=3.5e-07 Score=90.93 Aligned_cols=131 Identities=10% Similarity=-0.046 Sum_probs=92.8
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH---h-hhHHHHHHHHHHhhcchhh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGA---A-FNIYMLIFGRVLLGVGIGF 85 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~---a-~~~~~~~~~r~l~G~~~g~ 85 (365)
++|++......+.....+...++.++.|+++||+|||+.+..+..+..++.+.... . ++.+.+++..++.+++.+.
T Consensus 280 ~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 359 (438)
T PRK09952 280 NLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDM 359 (438)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHH
Confidence 34556666555666666777888899999999999999988877665554433322 1 2344555566777888887
Q ss_pred hhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHH-HHHHHHHHHHHHHHhhhhccccCCcch
Q 017823 86 ANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGF-QVCVATAVLSANLLNYGTQKIKVGWGW 164 (365)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~-~~~~~~g~~i~~~~~~~~~~~~~~~gw 164 (365)
..+ ....++.|.+|++.|+...++. +.+..+|..++|.+...+.+... .+|
T Consensus 360 ~~~---------------------------~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~-~~~ 411 (438)
T PRK09952 360 VVC---------------------------VQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG-GSW 411 (438)
T ss_pred HHH---------------------------HHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CCc
Confidence 777 6778889999999998888884 44566888899988888765322 235
Q ss_pred HHHH
Q 017823 165 RISL 168 (365)
Q Consensus 165 r~~f 168 (365)
+..+
T Consensus 412 ~~~~ 415 (438)
T PRK09952 412 HSVA 415 (438)
T ss_pred hHHH
Confidence 5443
No 172
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.59 E-value=1.1e-06 Score=85.63 Aligned_cols=112 Identities=13% Similarity=0.095 Sum_probs=80.3
Q ss_pred hcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchh
Q 017823 194 FYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIG 273 (365)
Q Consensus 194 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 273 (365)
...|.+.++.|.++.+.+ .......+...++.++.|+++||+|||+.+..+.....++.+..... +
T Consensus 29 p~~~~i~~~~~~s~~~~~-~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~-------------~ 94 (394)
T PRK11652 29 PAIADMARDLNVREGAVQ-AVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFA-------------H 94 (394)
T ss_pred ccHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH-------------c
Confidence 346777889999999998 88999999999999999999999999999998888777777665543 1
Q ss_pred hHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 274 YAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+.+...+...+.+.+.+. ..+.......|.+|.++|+.+.++.+..
T Consensus 95 ~~~~l~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (394)
T PRK11652 95 SLTVLIAASAIQGLGTGV-GGVMARTLPRDLYEGTQLRHANSLLNMG 140 (394)
T ss_pred cHHHHHHHHHHHHhhhhH-HHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 223333444444443332 2334445567888888888876665443
No 173
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.58 E-value=2.6e-07 Score=91.13 Aligned_cols=128 Identities=11% Similarity=-0.043 Sum_probs=93.7
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh-----h------hHHHHHHHHHH
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA-----F------NIYMLIFGRVL 78 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a-----~------~~~~~~~~r~l 78 (365)
+.|++..+.++......++..++.++.|++.||+|||+.+..+..+..++.++.++. + +...+....+.
T Consensus 313 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (481)
T TIGR00879 313 NAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLF 392 (481)
T ss_pred HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHH
Confidence 456778888888889999999999999999999999999998888877777666521 1 22222222222
Q ss_pred hhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccc
Q 017823 79 LGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKI 158 (365)
Q Consensus 79 ~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 158 (365)
.+.......+ ....++.|..|+++|+++.+..+....+|..+++.+...+.+.
T Consensus 393 ~~~~~~~~~~---------------------------~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~ 445 (481)
T TIGR00879 393 IAFFAMGWGP---------------------------VPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLES 445 (481)
T ss_pred HHHHHccccC---------------------------eehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2222222234 5556679999999999999999999999999999988777632
Q ss_pred cCCcchHHH
Q 017823 159 KVGWGWRIS 167 (365)
Q Consensus 159 ~~~~gwr~~ 167 (365)
.+|+..
T Consensus 446 ---~~~~~~ 451 (481)
T TIGR00879 446 ---IGVGGV 451 (481)
T ss_pred ---cCccce
Confidence 345544
No 174
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.57 E-value=2.9e-07 Score=89.94 Aligned_cols=127 Identities=12% Similarity=0.097 Sum_probs=104.4
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhh
Q 017823 12 KFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSV 91 (365)
Q Consensus 12 ~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~ 91 (365)
+.+..+.|...+...+...++.+..|++.||+|||+.+.++..+.+++..+...++|.+.+++.+++.|++......
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~--- 326 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLV--- 326 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH---
Confidence 44566788899999999999999999999999999999999998888888878888999999999999988766555
Q ss_pred hhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhH-HHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 92 WLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIG-FQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~-~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
....+..+..|++.++...+. .+....+|..+++.+++.+.+. .||+..|
T Consensus 327 ------------------------~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~---~G~~~~f 377 (396)
T TIGR00882 327 ------------------------GCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDS---IGFQGAY 377 (396)
T ss_pred ------------------------HHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHh---cccHHHH
Confidence 455566777787778776665 6788999999999999998843 4566655
No 175
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.57 E-value=1.6e-06 Score=87.25 Aligned_cols=114 Identities=12% Similarity=-0.012 Sum_probs=82.3
Q ss_pred cchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCC
Q 017823 190 NVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGG 269 (365)
Q Consensus 190 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 269 (365)
.....+.|.+.+++|.+.++.+ ...+...++..++.++.|+++||+|||+.+..+.+...++.+.....
T Consensus 53 ~~~~~~~~~l~~~~gls~~~~g-~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~---------- 121 (476)
T PLN00028 53 FAAAPLLPIIRDNLNLTKSDIG-NAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV---------- 121 (476)
T ss_pred HHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh----------
Confidence 3445567788899999999888 77888888899999999999999999999988887777776666554
Q ss_pred CchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHH
Q 017823 270 FSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVA 319 (365)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 319 (365)
.+.+...+..++.+++.+. ..+. ..+.+|.+|+++|+++.|+.+.
T Consensus 122 ---~s~~~l~~~r~l~G~~~~~-~~~~-~~~i~~~~~~~~rg~a~g~~~~ 166 (476)
T PLN00028 122 ---SSATGFIAVRFFIGFSLAT-FVSC-QYWMSTMFNGKIVGTANGIAAG 166 (476)
T ss_pred ---cCHHHHHHHHHHHHHHHHh-hHHH-HHHHHHhcChhheeHHHHHHHH
Confidence 1122333333444444332 2333 3345899999999999888753
No 176
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.57 E-value=1e-06 Score=86.51 Aligned_cols=118 Identities=10% Similarity=0.034 Sum_probs=86.9
Q ss_pred cccchhhcHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCC
Q 017823 188 RINVISFYAPVLF-RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGD 266 (365)
Q Consensus 188 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~ 266 (365)
+......+.|.++ ++.|.++.+.+ .......+...+.+++.|+++||+|||+.+..+.....++.+.....
T Consensus 25 ~~~~~~~~~~~~~~~~~g~s~~~~g-l~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~------- 96 (400)
T PRK11646 25 GFFVVFPLISIRFVDQLGWAAVMVG-IALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA------- 96 (400)
T ss_pred HHHHHHHHHHHHHHHHhCCcHHHHH-HHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh-------
Confidence 4444455566555 67899999999 88888888999999999999999999999999998888888777653
Q ss_pred CCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 267 HGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+..+...+...+.+.+.+. ..|....+..|.+|+++|+++.|+....
T Consensus 97 ------~~~~~l~~~~~l~g~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 143 (400)
T PRK11646 97 ------HEPWLLWLSCILSGLGGTL-FDPPRTALVIKLIRPHQRGRFFSLLMMQ 143 (400)
T ss_pred ------ccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 1233344444444444432 2343345568999999999999997666
No 177
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.57 E-value=1.7e-06 Score=87.61 Aligned_cols=106 Identities=18% Similarity=0.050 Sum_probs=76.6
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHH
Q 017823 206 SESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVY 285 (365)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (365)
+..+.. .......++.+++.++.++++||+|||+.+..+.++..++.++...... ..+.......++...+.
T Consensus 54 ~~~~~~-~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~-------~~~~~~~~~~~~~r~l~ 125 (502)
T TIGR00887 54 PSSVSA-AVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPG-------SSPKSVMATLCFWRFWL 125 (502)
T ss_pred hHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccC-------cccchHHHHHHHHHHHH
Confidence 344455 7888889999999999999999999999999988888887776655310 00111133455556666
Q ss_pred HHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 286 KAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 286 ~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+++.+.... ....+.+|.+|++.|+++.++.+..
T Consensus 126 G~~~g~~~~-~~~~~~~e~~p~~~Rg~~~~~~~~~ 159 (502)
T TIGR00887 126 GVGIGGDYP-LSAIITSEFATKKWRGAMMAAVFAM 159 (502)
T ss_pred HHHHhhhhH-HHHHHHHHhcChhhHHHHHHHHHHH
Confidence 666654444 4467779999999999999887666
No 178
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.56 E-value=1.6e-07 Score=93.91 Aligned_cols=130 Identities=11% Similarity=-0.017 Sum_probs=104.8
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhh--hhhhHHHHH--HHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRA--FGRKASILV--RSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGF 85 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr--~Grk~~l~~--~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~ 85 (365)
+.+++..+.+.+.++..++..+++++.|.+.|| +++|+...+ +..+.+++.++...+++++.+++.+++.|++.+.
T Consensus 270 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~ 349 (455)
T TIGR00892 270 DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGS 349 (455)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhch
Confidence 357889999999999999999999999999997 334433333 3344445555666778899999999999999998
Q ss_pred hhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchH
Q 017823 86 ANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWR 165 (365)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr 165 (365)
..+ ....++.|..|++++++..++.+....+|..+||.+++.+.+..+ +|+
T Consensus 350 ~~~---------------------------~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g--~~~ 400 (455)
T TIGR00892 350 VGA---------------------------LLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK--NYK 400 (455)
T ss_pred HHH---------------------------HHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC--Ccc
Confidence 888 777888999999999999999999999999999999998874332 366
Q ss_pred HHH
Q 017823 166 ISL 168 (365)
Q Consensus 166 ~~f 168 (365)
..|
T Consensus 401 ~~f 403 (455)
T TIGR00892 401 YIF 403 (455)
T ss_pred hHH
Confidence 554
No 179
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.56 E-value=2.3e-07 Score=89.10 Aligned_cols=105 Identities=13% Similarity=0.093 Sum_probs=88.9
Q ss_pred ccCCchHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh-----------hhHHHHHHHHHH
Q 017823 11 SKFDSQLLTTFTSSLY-IAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA-----------FNIYMLIFGRVL 78 (365)
Q Consensus 11 ~~~~~~~~~~~~s~~~-i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a-----------~~~~~~~~~r~l 78 (365)
.|+|+++.+.+.++.. ++..++.+++|++.||+|||+.+..+.++..++..+..+. ++.+.+..+.++
T Consensus 239 ~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 318 (356)
T TIGR00901 239 MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITL 318 (356)
T ss_pred cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHH
Confidence 5778999998888765 6788999999999999999999988888877776655443 356778888999
Q ss_pred hhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHH
Q 017823 79 LGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVA 142 (365)
Q Consensus 79 ~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~ 142 (365)
.+++.+...+ ...+++.|.+|+++||+..++.+...+
T Consensus 319 ~~~~~~~~~~---------------------------~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 319 EAVTGGLGTV---------------------------AFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHhHHHHH---------------------------HHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 9999999999 899999999999999999999876554
No 180
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.54 E-value=4.1e-07 Score=87.81 Aligned_cols=137 Identities=16% Similarity=0.170 Sum_probs=106.1
Q ss_pred HhHHHHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHH
Q 017823 169 KYRLQFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQ 248 (365)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~ 248 (365)
++|.+.+....+........-..+..-.|.+.++.++|.++.+ .+.+...+..-++..+.|.++||.+.|+.+..++++
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG-~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLil 103 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLG-ILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLIL 103 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHH
Confidence 3344444444443333222333445567888888899999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 249 MLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 249 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.++..+++++. ++.....++..+-+.+-+.+|+|..-.+ +.-+|+++||+..++-++.
T Consensus 104 sai~nil~Gfs-------------~s~~~~~~l~~lng~fQg~Gwpp~~~~i-~~Wfsr~eRG~~~siWn~s 161 (448)
T COG2271 104 SAIVNILFGFS-------------PSLFLFAVLWVLNGWFQGMGWPPCARTI-THWFSRKERGTWWSIWNTS 161 (448)
T ss_pred HHHHHHHHhhh-------------hHHHHHHHHHHHHHHHhcCCCcHHHHHH-HHHcCccccCceEEEehhh
Confidence 99999999986 3455666666666777788888886555 7999999999887777766
No 181
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.53 E-value=3.4e-07 Score=94.47 Aligned_cols=221 Identities=15% Similarity=0.097 Sum_probs=168.2
Q ss_pred cCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh--------------------
Q 017823 7 ISNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA-------------------- 66 (365)
Q Consensus 7 ~~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a-------------------- 66 (365)
+++.++++.++.|++.+.+-++..+...+..|.+-|..|-+.+-.+.+++++++++.++-
T Consensus 123 iErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~ 202 (735)
T KOG3626|consen 123 IERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVEN 202 (735)
T ss_pred hhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccC
Confidence 456778889999999999999999999999999999999999999999999999998762
Q ss_pred h--------------------------------hHHHHHHHHHHhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcc
Q 017823 67 F--------------------------------NIYMLIFGRVLLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWL 114 (365)
Q Consensus 67 ~--------------------------------~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (365)
+ -+..++++.++.|+|....++
T Consensus 203 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~t-------------------------- 256 (735)
T KOG3626|consen 203 PSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFT-------------------------- 256 (735)
T ss_pred CccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCcc--------------------------
Confidence 0 023677799999999999999
Q ss_pred cccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCC------------c----chHHHH----------
Q 017823 115 QSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVG------------W----GWRISL---------- 168 (365)
Q Consensus 115 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~------------~----gwr~~f---------- 168 (365)
...+|+-|...+++-....++......+|.++|.+++.+..+.-.. . .|..-|
T Consensus 257 -lGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~ 335 (735)
T KOG3626|consen 257 -LGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFS 335 (735)
T ss_pred -CCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988888876542111 1 233333
Q ss_pred ----------------------------------------------------HhHHHHHHHHHHHHHHhcccccchhhcH
Q 017823 169 ----------------------------------------------------KYRLQFVMAILIPFFQHVTRINVISFYA 196 (365)
Q Consensus 169 ----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (365)
...+++.+...+........+.....|.
T Consensus 336 a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFl 415 (735)
T KOG3626|consen 336 AVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFL 415 (735)
T ss_pred HHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhh
Confidence 1122345555555555566788888999
Q ss_pred HHHH-HHcCCCcchhhHHHH-HHHHHHHHHHHHHHHHHHhhhCc--chHHHHhHHHHHHHHHH
Q 017823 197 PVLF-RTIKLSESTSLLMSA-IVTGSLGTISTSLSMILADRLGR--KVLFLVGGIQMLVSRVM 255 (365)
Q Consensus 197 ~~~~-~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~dr~gr--r~~l~~~~~~~~i~~~~ 255 (365)
|.|+ ++++.+.+.+. .+. .+.--+..+|.+++|++..|+.- |.......+...++++.
T Consensus 416 PKyLE~Qfg~sas~An-~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~ 477 (735)
T KOG3626|consen 416 PKYLETQFGISASLAN-ILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLF 477 (735)
T ss_pred HHHHHHHcCCCHHHHH-HHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHH
Confidence 9999 56899999888 555 44444566888899999999854 34444444444333333
No 182
>TIGR00898 2A0119 cation transport protein.
Probab=98.52 E-value=3.5e-07 Score=92.25 Aligned_cols=111 Identities=14% Similarity=0.067 Sum_probs=83.1
Q ss_pred cHHHHHHHcCCC---cchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCc
Q 017823 195 YAPVLFRTIKLS---ESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFS 271 (365)
Q Consensus 195 ~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 271 (365)
+.|.+.++.+.+ +.+.+ ...+...++..++.++.|+++||+|||+.+..+.++..++.+...+.
T Consensus 111 ~~~~i~~e~~l~c~~~~~~~-~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~------------ 177 (505)
T TIGR00898 111 FSSTIVTEWDLVCEDAWKVD-LTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS------------ 177 (505)
T ss_pred ccccEEEEecceechHHHHH-HHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc------------
Confidence 445556777887 67777 88899999999999999999999999999999888888777766654
Q ss_pred hhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 272 IGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
++.+...+...+.+++.+. ..+....+..|.+|+++|+.+.++....
T Consensus 178 -~~~~~~~~~r~l~G~~~~~-~~~~~~~~~~e~~~~~~r~~~~~~~~~~ 224 (505)
T TIGR00898 178 -PNYTVFLVFRLLVGMGIGG-IWVQAVVLNTEFLPKKQRAIVGTLIQVF 224 (505)
T ss_pred -ccHHHHHHHHHHHHhhccc-hHHHHHHHhheecChhhhHHHHHHHHHH
Confidence 2234444555555555443 3445567779999999999888876444
No 183
>PRK11043 putative transporter; Provisional
Probab=98.52 E-value=1.8e-06 Score=84.39 Aligned_cols=108 Identities=18% Similarity=0.098 Sum_probs=75.9
Q ss_pred HHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhH
Q 017823 196 APVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYA 275 (365)
Q Consensus 196 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 275 (365)
.|.+.++.|.++++.+ ...+...++..++.++.|+++||+|||+.+..+..+..++.+..... ++.
T Consensus 29 ~~~i~~~~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-------------~~~ 94 (401)
T PRK11043 29 FKAIQADLQTSASAVS-ASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV-------------ESA 94 (401)
T ss_pred HHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh-------------cCH
Confidence 3445678899999998 88999999999999999999999999999998887777766665543 122
Q ss_pred HHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHH
Q 017823 276 YLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITV 318 (365)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~ 318 (365)
+...+...+.+.+.+.. .+.......|.+|++++++..+..+
T Consensus 95 ~~l~~~~~l~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (401)
T PRK11043 95 AQLLVLRFVQAVGVCSA-AVIWQALVIDRYPAQKANRVFATIM 136 (401)
T ss_pred HHHHHHHHHHHhhhHHH-HHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 33333334433433222 2233345578999988877766554
No 184
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.51 E-value=4.8e-07 Score=86.97 Aligned_cols=122 Identities=13% Similarity=0.006 Sum_probs=94.7
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhh
Q 017823 11 SKFDSQLLTTFTSSLYIAGLIASLFASSVTRAF-GRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQV 89 (365)
Q Consensus 11 ~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~-Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~ 89 (365)
.|.|..+.+.+.+...++..+++++.|++.||+ +||+.+..+..+.+++.....+.++..... .-++.|++.|...+
T Consensus 227 ~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~- 304 (355)
T TIGR00896 227 HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFP- 304 (355)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhH-
Confidence 577899999999999999999999999999999 567777777777777777666665433322 45678999988888
Q ss_pred hhhhhhhcccccchhhhhHHHhhcccccceeecccC-CCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccC
Q 017823 90 SVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMA-PPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKV 160 (365)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~ 160 (365)
.....+.+.. ++++++...+..+....+|..++|.+.+.+.+..+
T Consensus 305 --------------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 305 --------------------------LALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred --------------------------HHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5555554444 45667888898888888889999999888876544
No 185
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.48 E-value=7e-07 Score=81.32 Aligned_cols=125 Identities=26% Similarity=0.352 Sum_probs=105.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhh--HHHHHHHHHHhhcchhhhhhhhhhh
Q 017823 16 QLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFN--IYMLIFGRVLLGVGIGFANQVSVWL 93 (365)
Q Consensus 16 ~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~--~~~~~~~r~l~G~~~g~~~~~~~~~ 93 (365)
...++..+.+.++..+++++.|.+.||+|||+.+..+.....++.+..++..+ .+.+++.|+..|++.+...+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----- 113 (338)
T COG0477 39 LLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLP----- 113 (338)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHH-----
Confidence 47899999999999999999999999999998888888766666777777766 89999999999999998888
Q ss_pred hhhcccccchhhhhHHHhhcccccceeecccCCC-CCcchhhhHHHH-HHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 94 FYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPP-KNRGAFNIGFQV-CVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~r~~~~~~~~~-~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
....++.|..|+ ++|+...+.... ...+|..+++.++..+... ...+||..+
T Consensus 114 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 167 (338)
T COG0477 114 ----------------------VASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA-LLWGWRAAF 167 (338)
T ss_pred ----------------------HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcchHHHH
Confidence 888899999987 678888888888 5888888888777766644 445788744
No 186
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.48 E-value=9.9e-07 Score=88.62 Aligned_cols=125 Identities=15% Similarity=0.138 Sum_probs=112.9
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh--HHHHHHHHHHHHHHHHHHH--------hhhHHHHHHHHHH
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRK--ASILVRSTAFLAGSALRGA--------AFNIYMLIFGRVL 78 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk--~~l~~~~~~~~~~~~~~~~--------a~~~~~~~~~r~l 78 (365)
+++|++..+...+.-+..+...+|++++|++.||+|.| +++..+..++.+..+...+ .++.+.+.+.-++
T Consensus 310 ~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~ 389 (477)
T PF11700_consen 310 EVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVL 389 (477)
T ss_pred HhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHH
Confidence 46788899999999999999999999999999999999 8998888888666666555 5788899999999
Q ss_pred hhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccc
Q 017823 79 LGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKI 158 (365)
Q Consensus 79 ~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 158 (365)
.|+..|..++ ...++.+|..|+++.+...|++....-....+||++.+.+.+.
T Consensus 390 ~G~~~G~~qs---------------------------~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~ 442 (477)
T PF11700_consen 390 IGLFMGGIQS---------------------------ASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDA 442 (477)
T ss_pred HHHHhhhHHH---------------------------HHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 9999999999999999999999999999999999999888865
Q ss_pred cC
Q 017823 159 KV 160 (365)
Q Consensus 159 ~~ 160 (365)
.+
T Consensus 443 tg 444 (477)
T PF11700_consen 443 TG 444 (477)
T ss_pred hC
Confidence 54
No 187
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.46 E-value=2.4e-06 Score=83.16 Aligned_cols=112 Identities=13% Similarity=-0.087 Sum_probs=76.9
Q ss_pred hhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCch
Q 017823 193 SFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSI 272 (365)
Q Consensus 193 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 272 (365)
....|.+.+++|.++.+.+ ...+...++..++.+..|+++||+|||+.+.........+.. .... .
T Consensus 11 ~~~lp~i~~~~~~s~~~~g-~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~-~~~~-----------~- 76 (368)
T TIGR00903 11 SPVLSLVAEDIDVSKEELG-LLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAG-RLLD-----------P- 76 (368)
T ss_pred HhhHHHHHHHhCcCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH-HHHH-----------h-
Confidence 3457788899999999998 888999999999999999999999999876654433333221 1111 0
Q ss_pred hhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 273 GYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.+....++.-.+.+.+.+. .. ......+|.+|+++|+++.++....
T Consensus 77 ~~~~~l~~~R~l~G~g~~~-~~-~~~~~~~~~~~~~~r~~a~~~~~~~ 122 (368)
T TIGR00903 77 FNYEWLLACQLLAALGQPF-LL-NAFAPAASQIREERRDLVISLLSFA 122 (368)
T ss_pred ccHHHHHHHHHHHHhHhHH-HH-HHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 1233444445555555442 22 2233448999999999999988766
No 188
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.44 E-value=1.1e-06 Score=87.46 Aligned_cols=123 Identities=15% Similarity=0.126 Sum_probs=90.9
Q ss_pred cCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhh-----hhHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHH
Q 017823 7 ISNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFG-----RKASILVRSTAFLAGSALRGAA----FNIYMLIFGRV 77 (365)
Q Consensus 7 ~~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~G-----rk~~l~~~~~~~~~~~~~~~~a----~~~~~~~~~r~ 77 (365)
.++++|+|+++.....+...+...+ -++.|.++|.+- ||+-++++..+..++....+.. .+.....+.-+
T Consensus 16 l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~ 94 (433)
T PF03092_consen 16 LKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLF 94 (433)
T ss_pred HHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHH
Confidence 3456777799999988888887765 467899999863 5555666776665555555443 34566666777
Q ss_pred HhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCC--CCCcchhhhHHHHHHHHHHHHHHHHhhhh
Q 017823 78 LLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAP--PKNRGAFNIGFQVCVATAVLSANLLNYGT 155 (365)
Q Consensus 78 l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~--~~~r~~~~~~~~~~~~~g~~i~~~~~~~~ 155 (365)
+..+|...... .+.+++.|... |+.||...+.......+|.+++..+++.+
T Consensus 95 la~~g~a~~DV---------------------------~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l 147 (433)
T PF03092_consen 95 LASFGYAFADV---------------------------AADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPL 147 (433)
T ss_pred HHHHHHHHHHH---------------------------hhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 78888888888 88888888773 33477888888888999999998888776
Q ss_pred cc
Q 017823 156 QK 157 (365)
Q Consensus 156 ~~ 157 (365)
.+
T Consensus 148 ~~ 149 (433)
T PF03092_consen 148 LD 149 (433)
T ss_pred hh
Confidence 64
No 189
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.44 E-value=6.4e-07 Score=90.95 Aligned_cols=122 Identities=14% Similarity=0.120 Sum_probs=111.9
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
+++|.++...|++.+...+|..+|++..+++.+|+++++.+..+.++++++.+..+++++.+...++-++.|++......
T Consensus 247 ~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~ 326 (524)
T PF05977_consen 247 DVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANS 326 (524)
T ss_pred HHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 45667799999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcc
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQK 157 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~ 157 (365)
...+.+.+..|++.|||+++++++....+..+|..+.+.+.+
T Consensus 327 ---------------------------~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~ 368 (524)
T PF05977_consen 327 ---------------------------SLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLAD 368 (524)
T ss_pred ---------------------------HHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777888899999999999999999999999999998888773
No 190
>PRK15075 citrate-proton symporter; Provisional
Probab=98.43 E-value=1.1e-06 Score=87.30 Aligned_cols=122 Identities=12% Similarity=0.019 Sum_probs=85.6
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHH-HH---HhhhHHHHHHHHHHhhcchhh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSAL-RG---AAFNIYMLIFGRVLLGVGIGF 85 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~-~~---~a~~~~~~~~~r~l~G~~~g~ 85 (365)
..|++..+.++....+.++..++.++.|+++||+|||+.+..+..+..+.... .. ..+++.......++.|++.+.
T Consensus 268 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 347 (434)
T PRK15075 268 VLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGS 347 (434)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 35777888888888899999999999999999999999987765443322211 11 123344444455556666666
Q ss_pred hhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHH-HHHHHHHHHHHHHhhhhccc
Q 017823 86 ANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQ-VCVATAVLSANLLNYGTQKI 158 (365)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~-~~~~~g~~i~~~~~~~~~~~ 158 (365)
..+ ....+..|..|+++|+...++.. .+..++..++|.+.+.+.+.
T Consensus 348 ~~~---------------------------~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~ 394 (434)
T PRK15075 348 YNG---------------------------AMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHV 394 (434)
T ss_pred HHh---------------------------hHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 655 55567899999999999998854 34445566788887777643
No 191
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.42 E-value=8e-06 Score=81.01 Aligned_cols=131 Identities=13% Similarity=0.084 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcch-hhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHH
Q 017823 172 LQFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSEST-SLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQML 250 (365)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~ 250 (365)
+...+.+...++..+= ....+-.|.+.++.|+++++ .+ .+......+..+..+++|+++||+|-|+.+..+.+...
T Consensus 27 ~~~~~lC~fGF~~e~R--~n~s~a~p~L~~elglT~~qv~G-~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Ws 103 (511)
T TIGR00806 27 VLVLYLCFYGFMAQFR--PGESFITPYLLTVLNFTEETVTN-EIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFV 103 (511)
T ss_pred HHHHHHHHHHHHHHhh--chHHHHHHHHHHHcCCCHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 3444455555555442 33444577777899999999 77 99999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 251 VSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 251 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+...+.++. .......+.-++++++-+..+ ....++.+.+|+++|+++.|+.++.
T Consensus 104 l~t~L~~fa-------------~Sl~~L~i~R~llGvaEA~~~--A~~syI~~WfP~kER~ratsi~~sg 158 (511)
T TIGR00806 104 CVWLLLLLG-------------TSVWHMQLMEVFYSVTMAARI--AYSSYIFSLVPPSRYQRAAAYSRAA 158 (511)
T ss_pred HHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 888888875 335566667777777777666 3356668999999999999999888
No 192
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.41 E-value=1.5e-06 Score=86.77 Aligned_cols=106 Identities=13% Similarity=-0.086 Sum_probs=78.8
Q ss_pred HcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHH
Q 017823 202 TIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVL 281 (365)
Q Consensus 202 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (365)
+.+++..+.+ ...+...++..++.++.|+++||+|||+.+..+.++..+..++..... ....+..++.
T Consensus 70 ~~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~ 137 (465)
T TIGR00894 70 NFKWSGALQG-LILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAA-----------GGGIALVVFC 137 (465)
T ss_pred CCCCCHHHhh-HHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHH-----------HcCchHHHHH
Confidence 4677888888 889999999999999999999999999999988887777766654331 0112334444
Q ss_pred HHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 282 ICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
-.+.+.+.+.. .|....+.+|.+|+++|+++.++....
T Consensus 138 r~~~G~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~ 175 (465)
T TIGR00894 138 RVIQGLAQGSV-SPATHKIIVKWAPPKERSRLLGMSTSG 175 (465)
T ss_pred HHHHHHhcccc-hhhHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 55555555444 344456679999999999999988775
No 193
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.40 E-value=3.5e-06 Score=82.48 Aligned_cols=115 Identities=12% Similarity=-0.013 Sum_probs=89.3
Q ss_pred cchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCC
Q 017823 190 NVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGG 269 (365)
Q Consensus 190 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 269 (365)
.......|.+.+++|.+.++.+ ...+...++..++.++.+++.||+|||+++..+..+..++.+..++.
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g-~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a---------- 94 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAA-LLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELY---------- 94 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHC----------
Confidence 4455678888899999999999 89999999999999999999999999999999999999999988875
Q ss_pred CchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 270 FSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
++.+..++.-.+.+.+.+...... ..+..|.+| ++|+++.+...+.
T Consensus 95 ---~~~~~ll~~r~l~Gig~~~~~~~~-~~~~~~~~~-~~~~~~~g~~~~~ 140 (393)
T PRK09705 95 ---PQSALLLSSALLGGVGIGIIQAVM-PSVIKRRFQ-QRTPLVMGLWSAA 140 (393)
T ss_pred ---cchHHHHHHHHHHHhHHHHHhhhh-hHHHHHHcc-ccchhHHHHHHHH
Confidence 223344455555556655443333 445578887 6789988876543
No 194
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.40 E-value=1.8e-06 Score=85.15 Aligned_cols=117 Identities=20% Similarity=0.170 Sum_probs=97.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHhhcchhhhhhhhhh
Q 017823 14 DSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA-FNIYMLIFGRVLLGVGIGFANQVSVW 92 (365)
Q Consensus 14 ~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a-~~~~~~~~~r~l~G~~~g~~~~~~~~ 92 (365)
++.+.+++.+...++..++.++.+++.||+|||+.+..+..+.+++.+...+. ++.+.+.+..++.|++.+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---- 330 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTG---- 330 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHH----
Confidence 35677788888899999999999999999999999999988888887776665 4567777888889999988888
Q ss_pred hhhhcccccchhhhhHHHhhcccccceeecccCC-------CCCcchhhhHHHHHHHHHHHHHHHHhhhhcc
Q 017823 93 LFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAP-------PKNRGAFNIGFQVCVATAVLSANLLNYGTQK 157 (365)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-------~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~ 157 (365)
...++++|..| ++++|...++.+....+|..+++.+.+.+.+
T Consensus 331 -----------------------~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~ 379 (437)
T TIGR00792 331 -----------------------LVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG 379 (437)
T ss_pred -----------------------HHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667777654 4567999999999999999999998887763
No 195
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.40 E-value=1.9e-06 Score=83.99 Aligned_cols=129 Identities=11% Similarity=-0.033 Sum_probs=92.7
Q ss_pred cccCCchHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH------hhhHHHHHHHHHHhhcc
Q 017823 10 YSKFDSQLLTTFTSSLY-IAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGA------AFNIYMLIFGRVLLGVG 82 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~-i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~------a~~~~~~~~~r~l~G~~ 82 (365)
|.|+++++.|++..... ....++.++.|++.||+|+|+.+..+..+..+....... .++.........+.++.
T Consensus 237 ~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (390)
T TIGR02718 237 DAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLI 316 (390)
T ss_pred hcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHH
Confidence 35788999999988876 466778899999999999999988777655333332221 12333444455555666
Q ss_pred hhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCC-CCcchhhhHHHHHHHHHHHHHHHHhhhhccccCC
Q 017823 83 IGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPP-KNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVG 161 (365)
Q Consensus 83 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~ 161 (365)
.+...+ .......+..++ +++++..+..+...++|..+++.+++.+.+.
T Consensus 317 ~g~~~~---------------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~--- 366 (390)
T TIGR02718 317 TGITSV---------------------------AIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR--- 366 (390)
T ss_pred HHHHHH---------------------------HHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 676666 555566666665 7899999999999999999999999988743
Q ss_pred cchHHHH
Q 017823 162 WGWRISL 168 (365)
Q Consensus 162 ~gwr~~f 168 (365)
.|++..|
T Consensus 367 ~G~~~~f 373 (390)
T TIGR02718 367 FGYAGGF 373 (390)
T ss_pred HccHHHH
Confidence 3454443
No 196
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.40 E-value=1.6e-06 Score=87.26 Aligned_cols=120 Identities=15% Similarity=0.147 Sum_probs=85.4
Q ss_pred cccccchhhcHHHHHHH---cCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhh-hCcchHHHHhHHHHHHHHHHHHHHHh
Q 017823 186 VTRINVISFYAPVLFRT---IKLSESTSLLMSAIVTGSLGTISTSLSMILADR-LGRKVLFLVGGIQMLVSRVMIGSIMA 261 (365)
Q Consensus 186 ~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~l~~~~~~~~i~~~~~~~~~~ 261 (365)
-.+++....+.|.|+++ .|++..+++ .......+...++.+++|+++|| +|||+.+..+..+..++.+.+...
T Consensus 23 ~~~~~~~~~~L~~yl~~~~~lg~s~~~ag-~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~-- 99 (475)
T TIGR00924 23 RFSYYGMQGILAVYLVQQAGLGFSQEQAF-IIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS-- 99 (475)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCHHHHH-HHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc--
Confidence 34566667778888854 799999999 89999999999999999999999 899999999999988888777653
Q ss_pred hhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhh---hhHHHHHHHHH
Q 017823 262 DQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEI---ISAGQIITVAA 320 (365)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~---r~~~~~~~~~~ 320 (365)
+..+...+...+.+.+.+. ..|....+.+|.+|+++ |+++.++.+..
T Consensus 100 -----------~~~~~~~~~~~l~g~g~g~-~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~ 149 (475)
T TIGR00924 100 -----------IYPDLIFYGLGTIAVGSGL-FKANPSSMVGKLYERGDMPRRDGGFTLFYMS 149 (475)
T ss_pred -----------ccHhHHHHHHHHHHhcccc-ccCCHHHHHHHhcCCCCcccccceehhHHHH
Confidence 1122233333344444333 33344555678887654 77776665544
No 197
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.38 E-value=3.7e-06 Score=71.50 Aligned_cols=125 Identities=22% Similarity=0.171 Sum_probs=102.5
Q ss_pred ccCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhh
Q 017823 6 NISNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGF 85 (365)
Q Consensus 6 ~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~ 85 (365)
+.++.-++++..--.-.++.+....+.+++.+.+.+++|.|+.++++.+...+-.... +-++.+.++.+-++.|++.+.
T Consensus 27 ~~~~~~~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~ 105 (156)
T PF05978_consen 27 HERNPSSISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAAL 105 (156)
T ss_pred hhcCcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHH
Confidence 3333344555555555667778889999999999999999999999999988654443 557889999999999999999
Q ss_pred hhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccc
Q 017823 86 ANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKI 158 (365)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 158 (365)
.+. ....++.+..++++|++..+++......+.++|+++.....+.
T Consensus 106 lW~---------------------------aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~~ 151 (156)
T PF05978_consen 106 LWT---------------------------AQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQG 151 (156)
T ss_pred hhH---------------------------hhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999 8888899999999999999999988888999998887776543
No 198
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.37 E-value=1.5e-05 Score=79.64 Aligned_cols=106 Identities=8% Similarity=0.057 Sum_probs=78.0
Q ss_pred HcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHH
Q 017823 202 TIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVL 281 (365)
Q Consensus 202 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (365)
++|+++++.+ ...++..+...+.++..|++.||+|.|+.+..+..+..+..+..++... +.. ++.+..++.
T Consensus 64 ~~~ls~~q~g-~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~-------~~~-~s~~~lli~ 134 (462)
T PRK15034 64 GFNFTTDQLF-LLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQ-------NPN-TPFGIFIVI 134 (462)
T ss_pred hcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc-------ccC-CCHHHHHHH
Confidence 6899999998 8888899999999999999999999999999988888877776665310 001 223344444
Q ss_pred HHHHHHhhccccccccccccccCCChhhhhHHHHHHH
Q 017823 282 ICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITV 318 (365)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~ 318 (365)
..+.+++ +..+.+ ....+++.+|+++||++.|+..
T Consensus 135 r~l~Gig-g~~f~~-~~~~vs~wfp~~~rG~A~Gi~~ 169 (462)
T PRK15034 135 ALLCGFA-GANFAS-SMGNISFFFPKAKQGSALGING 169 (462)
T ss_pred HHHHHHH-HHhHHH-HHHHHHHHCCHhHhHHHHHHHH
Confidence 4444444 333433 3455689999999999999984
No 199
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.35 E-value=3.1e-06 Score=82.96 Aligned_cols=121 Identities=16% Similarity=0.026 Sum_probs=81.2
Q ss_pred cccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhh-----Ccch-HHHHhHHHHHHHHHHHHHH
Q 017823 186 VTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRL-----GRKV-LFLVGGIQMLVSRVMIGSI 259 (365)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-----grr~-~l~~~~~~~~i~~~~~~~~ 259 (365)
.........-.|.++++.|++.++.+ ........ .+..++.|+++||+ |||| .+..+..+.+++...+.+.
T Consensus 12 ~~~~~~~~~~~~~~l~~~g~~~~~ig-~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~ 88 (402)
T PRK11902 12 GLPLALTSGTLQAWMTVEGLDIQTIG-FFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFC 88 (402)
T ss_pred hhhHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhc
Confidence 33455566678999999999999998 55444443 58889999999999 7776 5777777777676666553
Q ss_pred HhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 260 MADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
. +....+......++.... .....+....+..|.+|+|+|+++.++....
T Consensus 89 ~----------~~~~~~~l~~~~~~~~~~-~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g 138 (402)
T PRK11902 89 P----------PHAALWPLAGLAVLVAFL-SASQDIVFDAYSTDVLHPEERGAGAAVKVLG 138 (402)
T ss_pred C----------ccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcChhhhhHHHHHHHHH
Confidence 1 112233333333333333 3334555567779999999999887776554
No 200
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.34 E-value=7.5e-05 Score=72.98 Aligned_cols=267 Identities=10% Similarity=0.028 Sum_probs=175.9
Q ss_pred cccCCchHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 10 YSKFDSQLLT-TFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 10 ~~~~~~~~~~-~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
+.|++..|.. -+.-...-.+....++...++|..+.|++++++.+...+...+..+.++...+-+..+..|++.+....
T Consensus 34 ~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~eva 113 (412)
T PF01770_consen 34 DKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAAEVA 113 (412)
T ss_pred ccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHHH
Confidence 3566666654 333344556677888999999999999999999999999999999999999999999999999887554
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
..+|+-...|+++-.++.+......-+|..++.++|-.+.+... ...+...
T Consensus 114 ----------------------------y~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~-~sy~~L~ 164 (412)
T PF01770_consen 114 ----------------------------YYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGG-VSYFQLN 164 (412)
T ss_pred ----------------------------HHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCHHHHH
Confidence 66777777788888888888888888887777777766654221 1222221
Q ss_pred ------------------------------------------------------------------------------Hh
Q 017823 169 ------------------------------------------------------------------------------KY 170 (365)
Q Consensus 169 ------------------------------------------------------------------------------~~ 170 (365)
-+
T Consensus 165 ~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y 244 (412)
T PF01770_consen 165 YISLASVSLALLIALFLPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCY 244 (412)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHh
Confidence 22
Q ss_pred HHHHHHHHHHHHHHhcccccchhhcHHHHHHHc---CCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHh--
Q 017823 171 RLQFVMAILIPFFQHVTRINVISFYAPVLFRTI---KLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVG-- 245 (365)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~-- 245 (365)
+++.++...++.....+++.....|...+.++. +-+..-.+ ..-....+.+.++.+..|++..++.+..-+..+
T Consensus 245 ~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG-~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~ 323 (412)
T PF01770_consen 245 SNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNG-AVEAASTLLGAIAALLAGYVKVNWDRWGELALGVF 323 (412)
T ss_pred cCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccch-HHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHH
Confidence 334455555666666677777778888887776 22222334 556666677777888888885555554333322
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 246 GIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 246 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
..+.+..++.+... ++.|...+..+++...+.+.......-+ +.....|.-|...|+...+
T Consensus 324 S~l~a~~L~lm~~t-------------~~Iwv~Y~~yIif~~~y~fliTiA~~qI-A~~l~~e~yaLVFGiNtf~ 384 (412)
T PF01770_consen 324 SLLQAGLLFLMSFT-------------GNIWVCYAGYIIFRSLYMFLITIASFQI-AKNLSEERYALVFGINTFV 384 (412)
T ss_pred HHHHHHHHHHHHHh-------------hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhccccceeeeeeeHHHH
Confidence 22333333333332 4566777777777777765544443333 4444555556666655443
No 201
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.34 E-value=3.5e-06 Score=85.13 Aligned_cols=129 Identities=9% Similarity=0.040 Sum_probs=94.8
Q ss_pred cccCCchHHHHHHH-HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH---HHh-hhHHHHHHHHHHhhcchh
Q 017823 10 YSKFDSQLLTTFTS-SLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALR---GAA-FNIYMLIFGRVLLGVGIG 84 (365)
Q Consensus 10 ~~~~~~~~~~~~~s-~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~---~~a-~~~~~~~~~r~l~G~~~g 84 (365)
+.|+|.++.++... ...++..++.++.|++.||+|||+.+..+..+..+..+.. +.. ++.+.+...-++..+..|
T Consensus 252 ~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g 331 (491)
T PRK11010 252 GVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGG 331 (491)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH
Confidence 46888999999975 5668999999999999999999998776665555444322 222 345555555566555555
Q ss_pred hhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcch
Q 017823 85 FANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGW 164 (365)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gw 164 (365)
...+ ...++..+..|++.++...++.+...++|..+++.+.+.+.+ ..||
T Consensus 332 ~~~~---------------------------~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~---~~G~ 381 (491)
T PRK11010 332 MGTA---------------------------AFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVE---AHGW 381 (491)
T ss_pred HHHH---------------------------HHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCh
Confidence 5555 556667888888899999999999999998888888877774 3467
Q ss_pred HHHH
Q 017823 165 RISL 168 (365)
Q Consensus 165 r~~f 168 (365)
+..|
T Consensus 382 ~~~f 385 (491)
T PRK11010 382 PTFY 385 (491)
T ss_pred HHHH
Confidence 6554
No 202
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.34 E-value=1.3e-06 Score=84.46 Aligned_cols=125 Identities=16% Similarity=0.149 Sum_probs=115.6
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
+++|++..+...+.....+..+++++++|++.||+|.|+++..+.++..+.++..-+......+.++-.+.|.+.|..+.
T Consensus 281 ~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA 360 (438)
T COG2270 281 ADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQA 360 (438)
T ss_pred HHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHH
Confidence 35677799999999999999999999999999999999999999999999999888888888888888999999999999
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccC
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKV 160 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~ 160 (365)
.+-+|..+..|+++-++..+++....-.+..+||.+...+.+..+
T Consensus 361 ---------------------------~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg 405 (438)
T COG2270 361 ---------------------------SSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITG 405 (438)
T ss_pred ---------------------------HHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999888876654
No 203
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.33 E-value=1.7e-06 Score=95.82 Aligned_cols=120 Identities=14% Similarity=0.040 Sum_probs=106.8
Q ss_pred cccCCch-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 10 YSKFDSQ-LLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 10 ~~~~~~~-~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
.++.+.. +.+++.+...++..+++++.|++.||+++|+.+.++.++.+++.++..+..+.+.++++.++.|++.+...+
T Consensus 262 ~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 341 (1146)
T PRK08633 262 VLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIV 341 (1146)
T ss_pred HhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhH
Confidence 4567788 899999999999999999999999999999999888888888888888888888888999999999998888
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
...+++.+..|+++||+++++.+....+|.++++.++..+.
T Consensus 342 ---------------------------~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 342 ---------------------------PLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFS 382 (1146)
T ss_pred ---------------------------HHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788899999999999999999999999888887776654
No 204
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.33 E-value=6.1e-06 Score=75.32 Aligned_cols=266 Identities=14% Similarity=0.121 Sum_probs=150.0
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
..+++-..++|.+....+-...+...+.|.++|+-|||+.-+.-++..++++ ++-.++.+-.++++|++-|+..+..+.
T Consensus 65 stYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~LGGiaTsLLFS 143 (454)
T KOG4332|consen 65 STYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVLGGIATSLLFS 143 (454)
T ss_pred hhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhhhhhHHHHHHHH
Confidence 3456667778777777666777888899999999999998665555454443 334567888999999999999988877
Q ss_pred h-hhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHH--------HHHHHHHHHHhhhhcccc
Q 017823 89 V-SVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCV--------ATAVLSANLLNYGTQKIK 159 (365)
Q Consensus 89 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~--------~~g~~i~~~~~~~~~~~~ 159 (365)
. +-|+ +.|.. ++|+.-.-+....+ .+=.+++++.+..+.+..
T Consensus 144 aFEsWl---------------------------iaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~ 194 (454)
T KOG4332|consen 144 AFESWL---------------------------IAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTF 194 (454)
T ss_pred HHHHHH---------------------------HHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHh
Confidence 2 3333 45653 34443333322221 122223333333332211
Q ss_pred CCcchHHHH------------------------------------------HhHHHHHHHHHHHHHHhcccccchhhcHH
Q 017823 160 VGWGWRISL------------------------------------------KYRLQFVMAILIPFFQHVTRINVISFYAP 197 (365)
Q Consensus 160 ~~~gwr~~f------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (365)
. .|-..+| ...++..+.-.+...+....+.....|.|
T Consensus 195 s-lGPVAPFdAAacfLaigmAvil~~W~ENygdps~~kdlltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTP 273 (454)
T KOG4332|consen 195 S-LGPVAPFDAAACFLAIGMAVILSSWSENYGDPSENKDLLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTP 273 (454)
T ss_pred c-cCCCCchHHHHHHHHHHHHHHHhhhhhccCChhhhHHHHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecc
Confidence 1 1111111 11122333333344443444444555666
Q ss_pred HHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcc--hHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhh
Q 017823 198 VLF-RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRK--VLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGY 274 (365)
Q Consensus 198 ~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr--~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 274 (365)
.+- ++.+ .-.+ .+..-+....++|+.+..++..|-..| ..+.+.+....+.+.+...... ..++ ...
T Consensus 274 aLspn~e~---iPhG-fiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~----vsP~--kes 343 (454)
T KOG4332|consen 274 ALSPNDEE---IPHG-FIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSS----VSPS--KES 343 (454)
T ss_pred cCCCCccc---CCch-hHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhc----cCCC--cCC
Confidence 553 1111 2234 566777778888888887776554333 3444444444444433333221 1111 233
Q ss_pred HHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHH
Q 017823 275 AYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQII 316 (365)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~ 316 (365)
....++..+.+....+..|+.+... -++..|.+.|++.+-+
T Consensus 344 ~~~s~i~F~~~E~cvGlfwPSimkm-RsqyIPEearstimNf 384 (454)
T KOG4332|consen 344 PSESLIGFCLFEACVGLFWPSIMKM-RSQYIPEEARSTIMNF 384 (454)
T ss_pred chHHHHHHHHHHHHHhhcchHHHHH-HHhhCCHHHHhhhhhh
Confidence 4455777788888888888777544 4889999999876544
No 205
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.32 E-value=3.2e-05 Score=70.96 Aligned_cols=120 Identities=13% Similarity=0.114 Sum_probs=98.4
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA-------FNIYMLIFGRVLLG 80 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a-------~~~~~~~~~r~l~G 80 (365)
++.+|+|.+|...+.+.-.+|..+| ++.|.+.||+|+|.++.++.+...+|-.....+ .++|.+.+..++.|
T Consensus 29 k~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~ 107 (250)
T PF06813_consen 29 KSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGG 107 (250)
T ss_pred HHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHc
Confidence 4567788999999999999999874 889999999999999999999999988877664 35678888888888
Q ss_pred cchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 81 VGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 81 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
.+.+.... .+.....+.+| ++||.+.++.....+++..+-..+-..+.
T Consensus 108 ~s~~~~~t---------------------------a~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 108 NSSCWFNT---------------------------ASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred ccHHHhhh---------------------------HHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 88776666 55555668886 68999999999999998877666655554
No 206
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.31 E-value=6.2e-06 Score=82.29 Aligned_cols=97 Identities=18% Similarity=0.158 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccc
Q 017823 213 MSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFS 292 (365)
Q Consensus 213 ~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (365)
...+...+++++|+..++.++||+|||..+.++.++..++.++...... .+.....++.-++.+...+..
T Consensus 64 ~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~----------~~~~e~li~GR~i~Gl~~gl~ 133 (485)
T KOG0569|consen 64 LIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKS----------APSFEMLILGRLIVGLACGLS 133 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHH----------hhhHHHHHHHHHHHHHHhHHH
Confidence 4567778899999999999999999999999998888888888777632 234555666666666665555
Q ss_pred cccccccccccCCChhhhhHHHHHHHHH
Q 017823 293 WGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 293 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.+.. ..+..|..|++.||....+....
T Consensus 134 ~~~~-pmyl~E~sP~~~RG~~g~~~~~~ 160 (485)
T KOG0569|consen 134 TGLV-PMYLTEISPKNLRGALGTLLQIG 160 (485)
T ss_pred HHHH-HHHHhhcChhhhccHHHHHHHHH
Confidence 5544 45668999999999876665555
No 207
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.27 E-value=9.2e-06 Score=80.20 Aligned_cols=121 Identities=13% Similarity=0.023 Sum_probs=89.4
Q ss_pred cccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCC
Q 017823 188 RINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDH 267 (365)
Q Consensus 188 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 267 (365)
.........|.+.++.|.++.+.+ ...+...++..++++..+++.||+|||+.+..+..+..++.+.+....
T Consensus 18 ~~~~~~~l~~~~~~~~~~s~~~~g-~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~------- 89 (410)
T TIGR00885 18 ANDITNPMVPQFQQAFTLTAFQAA-LVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAA------- 89 (410)
T ss_pred HHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH-------
Confidence 334555677888899999999999 999999999999999999999999999999999999888877754431
Q ss_pred CCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 268 GGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
..++.+..++..++.+.+.+....+. ..+..|..|+++|++..++.+..
T Consensus 90 ---~~~~~~~~l~~~~l~G~g~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 138 (410)
T TIGR00885 90 ---EIMNYTLFLVGLFILTAGLGFLETAA-NPYILVMGPESTATRRLNLAQSF 138 (410)
T ss_pred ---hhccHHHHHHHHHHHHhhHHHHHhhh-hHHHHHHCCHhHHHHHHHHHHHH
Confidence 01223344455555555555444433 33446788988888888876665
No 208
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.25 E-value=0.0017 Score=64.36 Aligned_cols=141 Identities=18% Similarity=0.078 Sum_probs=90.4
Q ss_pred hhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCch
Q 017823 193 SFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSI 272 (365)
Q Consensus 193 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 272 (365)
...+..|+...|+++...+ ..=....+.++.++.+..++.+|+|..+.=..+......++.+.......... +.+.
T Consensus 278 ~~lmt~yl~~~G~s~~~ig-i~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~---~~~~ 353 (432)
T PF06963_consen 278 GGLMTAYLKSQGYSPSVIG-IFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGS---PFSS 353 (432)
T ss_pred cHHHHHHHHHCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCC---Cchh
Confidence 4456677777899999998 88888899999999999999999999888777777665555444433221100 0011
Q ss_pred hhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH-HHHHHHHHHHHhhcccCC
Q 017823 273 GYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA-GVFFFLTTFMHFFLPETK 338 (365)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~-~~f~~~~~~~~~~~~et~ 338 (365)
......+..+..--.+.- ++.....-+..|..|+++|++..|+-++. ..|-++..++....|+++
T Consensus 354 ~s~~~l~~gi~~SR~GLW-~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~P~ 419 (432)
T PF06963_consen 354 ISAYLLLGGIALSRIGLW-SFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPRPS 419 (432)
T ss_pred hHHHHHHHHHHHHHHHHH-hhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCChH
Confidence 222222333332222221 12222234558999999999999999888 555555555555666554
No 209
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.25 E-value=1.5e-05 Score=80.07 Aligned_cols=142 Identities=11% Similarity=0.079 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh----hhCcchHHHHh-HH
Q 017823 173 QFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILAD----RLGRKVLFLVG-GI 247 (365)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~grr~~l~~~-~~ 247 (365)
+.+......+..++ .......+.+.++++.|.+..... .......+.+.+..++.|+++| |+|||+.++.. ..
T Consensus 5 ~li~~~~~~~Giq~-~~~l~~~~l~~yl~~lg~~~~~~~-~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~ 82 (477)
T TIGR01301 5 KLLRVASVAAGVQF-GWALQLSLLTPYVQELGIPHAWAS-IIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHH
Confidence 34444444444444 455666677788899999999998 8889999999999999999999 59999988765 45
Q ss_pred HHHHHHHHHHHHHhhh--cCCCC-CCchhh-HHHHHHHHHHHHHhhccccccccccccccCCChhhh--hHHHHHH
Q 017823 248 QMLVSRVMIGSIMADQ--IGDHG-GFSIGY-AYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEII--SAGQIIT 317 (365)
Q Consensus 248 ~~~i~~~~~~~~~~~~--~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r--~~~~~~~ 317 (365)
...++..++....... ..+.. +..... .+..++...+..++.+....|.. ++.+|..|+++| +.+.++.
T Consensus 83 ~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~r-ALiaDl~p~~~~~~~~a~~~~ 157 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCR-AFLADLTGGDARRTRIANAYF 157 (477)
T ss_pred HHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccccCchhHHHHHHHHHH
Confidence 5555555554431100 00000 000011 12233334444455555556664 556999998866 3455543
No 210
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.23 E-value=9e-06 Score=80.59 Aligned_cols=119 Identities=10% Similarity=-0.021 Sum_probs=75.9
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH--H--hhhHHHHHHHHHHhhcchhh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRG--A--AFNIYMLIFGRVLLGVGIGF 85 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~--~--a~~~~~~~~~r~l~G~~~g~ 85 (365)
+.|++..+.+...++..++..+++++.|+++||+|||+.+.....+.++...... . .++.+..+..-.+.+...+.
T Consensus 273 ~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (432)
T PRK10406 273 TAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSF 352 (432)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 4567788888888888888899999999999999999988776554433332221 1 12233222222222233333
Q ss_pred hhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHH-HHHHHHHHHhhhh
Q 017823 86 ANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVA-TAVLSANLLNYGT 155 (365)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~-~g~~i~~~~~~~~ 155 (365)
..+ ....+..|.+|+|.|+.+.++.+.... +.....|.+...+
T Consensus 353 ~~~---------------------------~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l 396 (432)
T PRK10406 353 YTS---------------------------ISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL 396 (432)
T ss_pred HHH---------------------------HHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH
Confidence 333 445667899999999999999775433 3233455555544
No 211
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.22 E-value=7.8e-06 Score=80.11 Aligned_cols=120 Identities=10% Similarity=-0.145 Sum_probs=97.9
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
+.+|.|+.+.|.+.+...++..++++..+++.||+++|+.+..+. +.++.....++.++++...+.-++.|++.+...+
T Consensus 234 ~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~ 312 (393)
T PRK11195 234 VALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGALGGFFVV 312 (393)
T ss_pred HHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhh
Confidence 456788999999999999999999999999999999998887775 3344444556677788778888899999888877
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCC-cchhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKN-RGAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~-r~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
...+.+.|..|+++ +|++.+..+....+|..++..+...+.
T Consensus 313 ---------------------------~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~ 354 (393)
T PRK11195 313 ---------------------------PMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV 354 (393)
T ss_pred ---------------------------hHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 66667777766654 799999999999999999888877664
No 212
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.22 E-value=9e-06 Score=81.86 Aligned_cols=134 Identities=13% Similarity=0.194 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHhcccccchhhcHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhh-CcchHHHHhHHHH
Q 017823 172 LQFVMAILIPFFQHVTRINVISFYAPVLF-RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRL-GRKVLFLVGGIQM 249 (365)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~l~~~~~~~ 249 (365)
+.....+....... ..++....+.|.++ ++.|+++.++. ...........++.+++|+++||+ |||+.+..+.++.
T Consensus 9 ~~l~~l~~~~~~e~-fs~Yg~~~~L~~yL~~~lgls~~~a~-~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~ 86 (493)
T PRK15462 9 RAIYYVVALQIWEY-FSFYGMRALLILYLTNQLKYDDNHAY-ELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLM 86 (493)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 33344444444333 35566667888887 45799999998 888888888899999999999999 9999999999888
Q ss_pred HHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChh--hhhHHHHHHHHH
Q 017823 250 LVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLE--IISAGQIITVAA 320 (365)
Q Consensus 250 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~~~~~~~~~ 320 (365)
.++.+.+.... .......+...+...+.+. ..+....+.+|.+|++ .|.++.++.+..
T Consensus 87 ~lg~lll~~~~------------~~~~~~~l~l~li~iG~G~-~~~~~~alv~elfp~~~~~R~sgf~i~Y~~ 146 (493)
T PRK15462 87 AIGHVVLGASE------------IHPSFLYLSLAIIVCGYGL-FKSNVSCLLGELYEPTDPRRDGGFSLMYAA 146 (493)
T ss_pred HHHHHHHHHhh------------cchhHHHHHHHHHHHhccc-ccccHHHHHHHHCCCCCccccceehHHHHH
Confidence 88876554320 0011112222222233332 2233345679999986 688888887766
No 213
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.21 E-value=9e-06 Score=82.59 Aligned_cols=101 Identities=11% Similarity=-0.000 Sum_probs=79.8
Q ss_pred HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHH
Q 017823 201 RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILV 280 (365)
Q Consensus 201 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (365)
+....+..... ...++..++..+|+++.|+++||+|||+++.++..+..++.+..++. ++.+...+
T Consensus 111 ~~~c~~~~~~~-~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a-------------~~~~~~~~ 176 (521)
T KOG0255|consen 111 NLVCDSSTLVA-LGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFA-------------PNYWMFLI 176 (521)
T ss_pred ceeeCcHhHHH-HHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHh-------------CcHHHHHH
Confidence 44455666666 78899999999999999999999999999999999999998777775 33455566
Q ss_pred HHHHHHHhhccccccccccccccCCChhhhhHHHHH
Q 017823 281 LICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQII 316 (365)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~ 316 (365)
+-++.+++.+. ...+.+.+..|.++++.|+.+..+
T Consensus 177 ~Rfl~G~~~~~-~~~~~~~~~~E~~~~~~R~~~~~~ 211 (521)
T KOG0255|consen 177 FRFLSGFFGSG-PLTVGFGLVAEIVSPKQRGLALTL 211 (521)
T ss_pred HHHHHHhhccc-hhHHhHhhheeecCcchhhHHHHH
Confidence 66665555543 344556777999999999999888
No 214
>PRK10133 L-fucose transporter; Provisional
Probab=98.20 E-value=1.8e-05 Score=78.84 Aligned_cols=121 Identities=13% Similarity=-0.040 Sum_probs=88.5
Q ss_pred cccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCC
Q 017823 188 RINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDH 267 (365)
Q Consensus 188 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~ 267 (365)
.......+.|.+.+++|.++.+.+ ...+...++..++.++.|+++||+|||+.+..+..+..++.+++....
T Consensus 41 ~~~~~~~~~p~i~~~~~~s~~~~g-l~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~------- 112 (438)
T PRK10133 41 ANNLNDILLPQFQQAFTLTNFQAG-LIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAA------- 112 (438)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 445666778888889999999999 999999999999999999999999999999999999988887653221
Q ss_pred CCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 268 GGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
..++.+..++...+.+.+.+...... ..+..|..|++.|....++.+..
T Consensus 113 ---~a~~~~~ll~~r~l~G~g~g~~~~~~-~~~v~~~~~~~~~~~~~s~~~~~ 161 (438)
T PRK10133 113 ---EIMNYTLFLVGLFIIAAGLGCLETAA-NPFVTVLGPESSGHFRLNLAQTF 161 (438)
T ss_pred ---hcCCHHHHHHHHHHHHHHHHHHHhhH-HHHHHHhCChhhHHHHHHHHHHH
Confidence 01224455555666666665544444 33446777777666555555554
No 215
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.19 E-value=9.1e-06 Score=77.18 Aligned_cols=118 Identities=8% Similarity=-0.048 Sum_probs=92.9
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQV 89 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~ 89 (365)
.+|+++++.+...+.+..+..++.+..+++.||+|+|+.+..+..+..++.++....++... ..+-++.|++.+..+|
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P- 249 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFP- 249 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHH-
Confidence 46888999999999999999999999999999999999988888877777766655544332 3455588999999999
Q ss_pred hhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcc
Q 017823 90 SVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQK 157 (365)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~ 157 (365)
...+...+..|+ +.+.+.++. ....+|..+.|++.+.+.+
T Consensus 250 --------------------------~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad 289 (310)
T TIGR01272 250 --------------------------TIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLAD 289 (310)
T ss_pred --------------------------HHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHH
Confidence 777777777664 455666665 4566888999988777764
No 216
>PTZ00207 hypothetical protein; Provisional
Probab=98.12 E-value=1.8e-05 Score=81.17 Aligned_cols=121 Identities=12% Similarity=0.046 Sum_probs=81.0
Q ss_pred ccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCC
Q 017823 189 INVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHG 268 (365)
Q Consensus 189 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 268 (365)
.+.+..+.|.+.+++|++..+.. ....+ +.......++.|++.||+|+|+++.++.++..++.++.+.....
T Consensus 43 ~y~fsv~s~~L~~~lgls~~~l~-~i~sv-g~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~------ 114 (591)
T PTZ00207 43 MYAFNLISGAMQARYNLTQRDLS-TITTV-GIAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQE------ 114 (591)
T ss_pred HHHHHHHHHHHHHHhCcCHHHHH-HHHHH-HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcc------
Confidence 34556778888899999998887 55554 33334566788999999999999999999999999888775210
Q ss_pred CCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 269 GFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.-..+.+...+..++.+.+.+...... .....+.+| ++||++.|+....
T Consensus 115 -~i~~s~~~l~l~r~l~G~G~~~~~~~~-~~~i~~~Fp-~~RG~a~Gi~~~~ 163 (591)
T PTZ00207 115 -VIEGSVVRLSVYNGLMTLGCMLFDLGA-VVTVLSVFP-SNRGAVVAIMKTF 163 (591)
T ss_pred -cccCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCh-hhhHHHHHHHHHH
Confidence 001223334444444444433222222 334478887 6789999988877
No 217
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.12 E-value=1.8e-05 Score=79.95 Aligned_cols=135 Identities=15% Similarity=0.187 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHHhcccccchhhcHHHHH-HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhh-hCcchHHHHhHHH
Q 017823 171 RLQFVMAILIPFFQHVTRINVISFYAPVLF-RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADR-LGRKVLFLVGGIQ 248 (365)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~l~~~~~~ 248 (365)
++..+..+...+...+ .++....+.+.|+ ++.|++.+++. ..............+++|+++|| +|||+.+..+.++
T Consensus 13 p~~~~~~~~~~~~er~-~~y~~~~~l~~yl~~~lg~~~~~a~-~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~ 90 (489)
T PRK10207 13 PRPFFMIFFVELWERF-GYYGVQGILAVFFVKQLGFSQEQAF-ITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIV 90 (489)
T ss_pred ChhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHH
Confidence 3444444444444433 4555555566665 66899988887 77777777788888899999999 9999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhh--hhHHHHHHHHH
Q 017823 249 MLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEI--ISAGQIITVAA 320 (365)
Q Consensus 249 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~--r~~~~~~~~~~ 320 (365)
..++.+...... .......+...+.+.+.+... |....+..|.+|++. |+++.++.+..
T Consensus 91 ~~~g~~~~~~~~------------~~~~ll~~~~~l~~ig~g~~~-~~~~~li~~~~p~~~~~~~~~~~~~~~~ 151 (489)
T PRK10207 91 LAIGYFMTGMSL------------LKPDLIFIALGTIAVGNGLFK-ANPASLLSKCYPPKDPRLDGAFTLFYMS 151 (489)
T ss_pred HHHHHHHHHHhc------------cchhHHHHHHHHHHhcccccc-CCHHHHHHHhcCCCchhhhcchhHHHHH
Confidence 999888877641 111222233334444444333 334566789998874 45544444433
No 218
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.12 E-value=6.3e-06 Score=91.53 Aligned_cols=121 Identities=13% Similarity=0.013 Sum_probs=102.5
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh--------------------hh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA--------------------FN 68 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a--------------------~~ 68 (365)
+.+|.+..+.+++.+.+.++..+++++.|++.|+.++++.+..+.++.++..+..++. ++
T Consensus 254 ~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (1140)
T PRK06814 254 ETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRH 333 (1140)
T ss_pred HHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccc
Confidence 3467779999999999999999999999999998887776666666655555444442 67
Q ss_pred HHHHHHHHHHhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHH
Q 017823 69 IYMLIFGRVLLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSA 148 (365)
Q Consensus 69 ~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~ 148 (365)
.+.+.++.++.|++.+...+ ...+++.+..|+++||++++..+....+|..++
T Consensus 334 ~~~~~~~~~~~g~~~~~~~~---------------------------~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig 386 (1140)
T PRK06814 334 GWRILIDLFGLAAAGGLYIV---------------------------PLFAALQAWANPAHRARVIAANNVLNAAFMVAG 386 (1140)
T ss_pred cHHHHHHHHHHHHHHHHhHH---------------------------HHHHHHHhhCCcccceeeeHHHHHHHHHHHHHH
Confidence 78888899999999999988 888889999999999999999999999999999
Q ss_pred HHHhhhhc
Q 017823 149 NLLNYGTQ 156 (365)
Q Consensus 149 ~~~~~~~~ 156 (365)
+++.+.+.
T Consensus 387 ~~~~g~l~ 394 (1140)
T PRK06814 387 TIILALLQ 394 (1140)
T ss_pred HHHHHHHH
Confidence 99887775
No 219
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.11 E-value=2.3e-05 Score=63.52 Aligned_cols=91 Identities=22% Similarity=0.201 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhcccccc
Q 017823 216 IVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGP 295 (365)
Q Consensus 216 ~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (365)
....++..++.++.+++.||+|||+.+..+.....++.+..... ++.+...+...+.+.+.+.. .+
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~g~~~~~~-~~ 70 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS-------------SNITVLIIARFLQGFGAAFA-LV 70 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh-------------ccHHHHHHHHHHHHHHHHHH-HH
Confidence 34567788899999999999999999988887777776665543 12334444445555554433 34
Q ss_pred ccccccccCCChhhhhHHHHHHHHH
Q 017823 296 LRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 296 ~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
....+..|.+|+++|+++.++.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (141)
T TIGR00880 71 AGAALIADIYPPEERGVALGLMSAG 95 (141)
T ss_pred hHHHHHHHHCChhhhhHHHHHHHHh
Confidence 4556678999999999999998876
No 220
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.11 E-value=9.4e-06 Score=77.55 Aligned_cols=97 Identities=18% Similarity=0.028 Sum_probs=71.4
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHH
Q 017823 208 STSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKA 287 (365)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (365)
..++ .+-+.+.+...+.+...|.++||+|||.++..|.+..++..+.++... +....++.-.+.+
T Consensus 68 ~yaG-flGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~-------------~F~afv~aR~l~G- 132 (451)
T KOG2615|consen 68 FYAG-FLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR-------------NFAAFVLARFLGG- 132 (451)
T ss_pred hhhh-hHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHhhh-
Confidence 3455 788889999999999999999999999999999999999888777752 2222222233333
Q ss_pred hhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 288 GFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 288 ~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.+..-.+. .-++++|++++|.|+.+++.....
T Consensus 133 i~kgnl~v-~rAiisdV~sek~r~l~ms~v~~a 164 (451)
T KOG2615|consen 133 IFKGNLSV-IRAIISDVVSEKYRPLGMSLVGTA 164 (451)
T ss_pred hccCchHH-HHHHHHhhcChhhccceeeeeehh
Confidence 33333343 456779999999999888777666
No 221
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.09 E-value=1e-05 Score=84.36 Aligned_cols=143 Identities=13% Similarity=-0.050 Sum_probs=96.8
Q ss_pred HHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHH
Q 017823 176 MAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVM 255 (365)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~ 255 (365)
.......+.+.........-.|.+.++++++..+.+ .+.+...++..++.++.+++.||.+||+.+.++.++++++.++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G-~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll 114 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSG-LINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFL 114 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcce-eeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHH
Confidence 333333444333333444455666788999999998 8999999999999999999999999999999999999999988
Q ss_pred HHHHHhhhcCCCC--------------------C-----------------Cc-hhhHHHHHHHHHHHHHhhcccccccc
Q 017823 256 IGSIMADQIGDHG--------------------G-----------------FS-IGYAYLILVLICVYKAGFAFSWGPLR 297 (365)
Q Consensus 256 ~~~~~~~~~~~~~--------------------~-----------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (365)
+++.......... . .. .......++.-++.+++.+ ...++.
T Consensus 115 ~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~-~~~~~~ 193 (633)
T TIGR00805 115 LSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGAT-PIFPLG 193 (633)
T ss_pred HhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCC-cchhcC
Confidence 8776322110000 0 00 0012233344444444443 334555
Q ss_pred ccccccCCChhhhhHHHHHHHHH
Q 017823 298 WLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 298 ~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
..++.|.+|++.|+...++.+..
T Consensus 194 ~~~i~d~~~~~~~~~~~~i~~~~ 216 (633)
T TIGR00805 194 ISYIDDFAKSKNSPLYIGILESI 216 (633)
T ss_pred chhhhccCCccccHHHHHHHHHH
Confidence 67889999999999999887766
No 222
>PRK09848 glucuronide transporter; Provisional
Probab=98.08 E-value=2e-05 Score=78.52 Aligned_cols=120 Identities=8% Similarity=-0.020 Sum_probs=92.9
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHhhcchhhhh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAF--NIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~--~~~~~~~~r~l~G~~~g~~~ 87 (365)
.+|.++...++......++..++.++.+++.||+|+|+.+..+..+..++.+...+.+ +++.+.+..++.|+|.+...
T Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~ 337 (448)
T PRK09848 258 VLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTM 337 (448)
T ss_pred ecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444677888999999999999999999999988888877776653 67777778889999999998
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCC-------CcchhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPK-------NRGAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-------~r~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
+ ...++..|..|.+ ++|...+..+....+|..+++.+.+.+.
T Consensus 338 ~---------------------------~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l 386 (448)
T PRK09848 338 T---------------------------VMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFIL 386 (448)
T ss_pred H---------------------------HHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8 6777777776643 4588889999999999999888876654
No 223
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.05 E-value=1.1e-05 Score=76.70 Aligned_cols=101 Identities=14% Similarity=0.004 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhhhhhhhcccccchhh
Q 017823 26 YIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSVWLFYFSQTCDLLNN 105 (365)
Q Consensus 26 ~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~~~~ 105 (365)
.+.-.-|.++.+.+.||+|||+.+.++.+++++..++...+.+.-...+.-+..-+...+.++
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fq----------------- 453 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQ----------------- 453 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchhe-----------------
Confidence 456677889999999999999999999999999988887775433333333333334455566
Q ss_pred hhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhh
Q 017823 106 FQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNY 153 (365)
Q Consensus 106 ~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~ 153 (365)
..+.|..|.+|.+-|+...|.-....-+|.++.|+++.
T Consensus 454 ----------vaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA~ 491 (528)
T KOG0253|consen 454 ----------VAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIAM 491 (528)
T ss_pred ----------EEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHHH
Confidence 88999999999999999999999999999999999983
No 224
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.04 E-value=2.9e-05 Score=76.91 Aligned_cols=114 Identities=14% Similarity=0.122 Sum_probs=98.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHhhcchhhhhhhhhhh
Q 017823 16 QLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAF--NIYMLIFGRVLLGVGIGFANQVSVWL 93 (365)
Q Consensus 16 ~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~--~~~~~~~~r~l~G~~~g~~~~~~~~~ 93 (365)
...+.+..+..++..++.+++++++||+|+|+.+..+..+.+++.++..+.+ |.+.+++.-++.|++.+..+.
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~----- 334 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFV----- 334 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhccccc-----
Confidence 5678888899999999999999999999999999999999999999988886 999999999999999999998
Q ss_pred hhhcccccchhhhhHHHhhcccccceeecccCCC-------CCcchhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 94 FYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPP-------KNRGAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-------~~r~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
...++++|..+. ++.|...+......-+|..+++.+.+.+.
T Consensus 335 ----------------------~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l 382 (428)
T PF13347_consen 335 ----------------------IPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLL 382 (428)
T ss_pred ----------------------ccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHH
Confidence 888888887763 33577888888888888888887766554
No 225
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.00 E-value=1.4e-07 Score=93.60 Aligned_cols=99 Identities=16% Similarity=0.111 Sum_probs=74.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhh
Q 017823 210 SLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGF 289 (365)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (365)
.. +......++..+|+++.|+++||+|||+.+..+..+..++.++..+.. ...+.+...+.-.+.+++.
T Consensus 48 ~~-~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~----------~~~~~~~~~~~R~~~G~~~ 116 (451)
T PF00083_consen 48 SS-LLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAP----------SYNNFWMLLIGRFLIGFGI 116 (451)
T ss_pred HH-HHHHHHHhhhcccccccccccccccccccccccccccccccccccccc----------ccccccccccccccccccc
Confidence 34 677888999999999999999999999999999999988888887752 0013444555555666665
Q ss_pred ccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 290 AFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 290 ~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+.... ....+..|..|++.|+...++....
T Consensus 117 g~~~~-~~~~~~~E~~~~~~R~~~~~~~~~~ 146 (451)
T PF00083_consen 117 GGAYV-VSPIYISEIAPPKHRGFLSSLFQLF 146 (451)
T ss_pred ccccc-ccccccccccccccccccccccccc
Confidence 54443 4467779999999998776666555
No 226
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.99 E-value=2.2e-05 Score=72.41 Aligned_cols=128 Identities=9% Similarity=-0.004 Sum_probs=99.5
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHhhcchhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTA-FLAGSALRGAAFNIYMLIFGRVLLGVGIGFA 86 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~-~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~ 86 (365)
++.+|+|+...+.+.+..+...++.+++.|.++||+|++...+.+..+ +.++.....|+ ++.=..+..++|++....
T Consensus 292 ~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft--~lsPy~~m~~lGLsysll 369 (459)
T KOG4686|consen 292 QKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFT--FLSPYTSMTFLGLSYSLL 369 (459)
T ss_pred HHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhh--hccHHHHHHHHhhhHHHH
Confidence 467888999999999999999999999999999999999887765544 44554444443 333445667788876665
Q ss_pred hhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcch
Q 017823 87 NQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGW 164 (365)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gw 164 (365)
.. +.-..++...|.++.|.+.+..|...++|..+-+.+++.+.+..+.+-|
T Consensus 370 Ac---------------------------slWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~ 420 (459)
T KOG4686|consen 370 AC---------------------------SLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDN 420 (459)
T ss_pred HH---------------------------HHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhh
Confidence 54 3444566677888999999999999999999999999999977654334
No 227
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.97 E-value=6.1e-05 Score=72.95 Aligned_cols=110 Identities=15% Similarity=0.057 Sum_probs=82.6
Q ss_pred HHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhH
Q 017823 196 APVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYA 275 (365)
Q Consensus 196 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 275 (365)
.+.+-+++++|+.+.. ++..+..+.+.+.+++-|++.||+|.|+....+.++..+-.+...+.. ..+++
T Consensus 37 ~~~i~~~~~LS~~q~~-ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~---------~~~~~- 105 (417)
T COG2223 37 GVFIKSDFGLSEGQKG-LLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAV---------TYPST- 105 (417)
T ss_pred HhhhccccCCCHHHHH-HHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHc---------cCCch-
Confidence 3344478999999999 999999999999999999999999999999999999888888888763 11122
Q ss_pred HHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHH
Q 017823 276 YLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITV 318 (365)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~ 318 (365)
+..+++....+.+- +.-.+....+++.+|+|++|.+.|+.-
T Consensus 106 ~~ll~~gll~G~~G--asFav~m~~~s~~fP~~~qG~AlGI~g 146 (417)
T COG2223 106 WQLLVIGLLLGLAG--ASFAVGMPNASFFFPKEKQGLALGIAG 146 (417)
T ss_pred HHHHHHHHHHhccc--ceehcccccccccCChhhhhHHHHHhc
Confidence 33333333333322 222233455689999999999999987
No 228
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.94 E-value=0.00012 Score=72.09 Aligned_cols=119 Identities=15% Similarity=0.177 Sum_probs=101.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh-hhHHHHHH----HHHHhhcchhhhh
Q 017823 13 FDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA-FNIYMLIF----GRVLLGVGIGFAN 87 (365)
Q Consensus 13 ~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a-~~~~~~~~----~r~l~G~~~g~~~ 87 (365)
.+.+..+...++..++-...-...+++..|+|.|+.+.++.+..++=..+.+.. ++.+.... ...+.|+..+...
T Consensus 240 ~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~ 319 (400)
T PF03825_consen 240 YSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFH 319 (400)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHH
Confidence 456677878888888888888999999999999999999999999998888887 55444333 3456999999999
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHH-HHHHHHHHHHHHhhhhccc
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQV-CVATAVLSANLLNYGTQKI 158 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~-~~~~g~~i~~~~~~~~~~~ 158 (365)
. ....++.+..|++.|+++.+++.. ..++|..+|..+++.+.+.
T Consensus 320 ~---------------------------a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~ 364 (400)
T PF03825_consen 320 A---------------------------ASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDA 364 (400)
T ss_pred H---------------------------HHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 9 999999999999999999999876 6789999999999998843
No 229
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.92 E-value=2.6e-05 Score=77.57 Aligned_cols=116 Identities=9% Similarity=0.065 Sum_probs=92.3
Q ss_pred cchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCC
Q 017823 190 NVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGG 269 (365)
Q Consensus 190 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~ 269 (365)
..+.+++--.+++.+-.+..-+ ....+...+.++.-+.++++.+|+|+-+++.+++.+..+-.+.+...
T Consensus 388 ~lv~tFLfWHled~~~~~~LfG-v~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L---------- 456 (618)
T KOG3762|consen 388 GLVFTFLFWHLEDLGGIKTLFG-VVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYL---------- 456 (618)
T ss_pred HHHHHHHHHHHhhcCCcceeee-ehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHh----------
Confidence 3334444444577776666666 77777888889999999999999999999999988888887777766
Q ss_pred CchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 270 FSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.++|..+..-++-+...+..|..+ .++++...|++.|++++++....
T Consensus 457 ---~n~W~vLPieilqgit~aliWaa~-~sY~s~vaPp~l~at~Q~l~~g~ 503 (618)
T KOG3762|consen 457 ---QNPWMVLPIEILQGITHALIWAAI-ISYASHVAPPGLRATAQGLLQGI 503 (618)
T ss_pred ---cCchheeeHHHHHHHHHHHHHHHH-HHHHHhhCCCcchHHHHHHHHHH
Confidence 557777777777778888777776 46779999999999999999988
No 230
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.91 E-value=0.00012 Score=74.48 Aligned_cols=95 Identities=18% Similarity=0.089 Sum_probs=78.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhc
Q 017823 211 LLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFA 290 (365)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (365)
. +..+...++..++.++.|+++|++|||+.+.++.+...++.++.... .+.....+.-++.+++.+
T Consensus 92 s-~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a-------------~~~~~l~~GR~l~G~g~G 157 (513)
T KOG0254|consen 92 G-LLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALA-------------PSWYQLIVGRILTGLGVG 157 (513)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-------------hhHHHHHHHHHHhccchh
Confidence 5 78899999999999999999999999999999999999999999886 245566667777777766
Q ss_pred cccccccccccccCCChhhhhHHHHHHHHH
Q 017823 291 FSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 291 ~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
...... ..+.+|..|++.||...+.....
T Consensus 158 ~~~~~~-piy~sEiap~~~RG~l~~~~~l~ 186 (513)
T KOG0254|consen 158 GASVLA-PVYISEIAPAHIRGTLVSLYQLF 186 (513)
T ss_pred hhhhcc-hhhHhhcCChhhhHHHHHHHHHH
Confidence 554444 56779999999999888776655
No 231
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.89 E-value=0.0001 Score=67.57 Aligned_cols=123 Identities=18% Similarity=0.175 Sum_probs=85.3
Q ss_pred ccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCC
Q 017823 187 TRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGD 266 (365)
Q Consensus 187 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~ 266 (365)
...+.+..|.|.+-++.|++.++.. .+.....++..+ .++.|.+.||+|.+.++.++.....++..++......
T Consensus 16 Gt~Y~Fs~yS~~Lk~~l~~sq~~l~-~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~---- 89 (250)
T PF06813_consen 16 GTTYTFSAYSPQLKSRLGYSQSQLN-TLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSG---- 89 (250)
T ss_pred CcccchhhhhHHHHHHhCCCHHHHH-HHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhC----
Confidence 3567778899999999999999988 777777788776 5889999999999999999999999999888776411
Q ss_pred CCCCchhhHHHHHHHHHHHHHhhcccc-ccccccccccCCChhhhhHHHHHHHHH
Q 017823 267 HGGFSIGYAYLILVLICVYKAGFAFSW-GPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
..+....+...+..++. +.+..+ .........+++|. +||++.|+.-+.
T Consensus 90 --~i~~~~~~~~~~~~~l~--~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~ 139 (250)
T PF06813_consen 90 --RIPSLPVWLMCLFLFLG--GNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGF 139 (250)
T ss_pred --ccCccchHHHHHHHHHH--cccHHHhhhHHHHHHHHhCcc-ccCceehhhhHH
Confidence 11112233333333332 222222 22222333588985 799988887766
No 232
>PRK09669 putative symporter YagG; Provisional
Probab=97.86 E-value=0.00012 Score=72.72 Aligned_cols=115 Identities=17% Similarity=0.111 Sum_probs=86.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHhhcchhhhhhhhhhh
Q 017823 16 QLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGA--AFNIYMLIFGRVLLGVGIGFANQVSVWL 93 (365)
Q Consensus 16 ~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~--a~~~~~~~~~r~l~G~~~g~~~~~~~~~ 93 (365)
+..+.+.....+...++.+++++++||+|+|+.+..+..+..+......+ .++++.+++..++.|++.+...+
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~----- 338 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTP----- 338 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHH-----
Confidence 34455566667888889999999999999999998887766554433222 35677788888999999999988
Q ss_pred hhhcccccchhhhhHHHhhcccccceeecccCC-------CCCcchhhhHHHHHHHHHHHHHHHHhhhhcc
Q 017823 94 FYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAP-------PKNRGAFNIGFQVCVATAVLSANLLNYGTQK 157 (365)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-------~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~ 157 (365)
...++++|..+ .++.|...+.......+|..+|+.+++.+.+
T Consensus 339 ----------------------~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 339 ----------------------LQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred ----------------------HHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77778877765 2234566788888888999998888877653
No 233
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.82 E-value=0.00014 Score=73.11 Aligned_cols=116 Identities=11% Similarity=0.079 Sum_probs=88.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHH-----hhhHHHHHHHHHHhhcchhhhhh
Q 017823 14 DSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGA-----AFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 14 ~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~-----a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
+....+.+.+...++..++.++++++.||+|+|+.+..+..+.+++.+...+ .++.+.+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 3556677777777889999999999999999999998888776666655432 34567777778888999988888
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCC-------CCCcchhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAP-------PKNRGAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-------~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
...+++.|..+ .++.|...+......-+|..+++.+.+.+.
T Consensus 344 ---------------------------~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l 391 (473)
T PRK10429 344 ---------------------------LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVL 391 (473)
T ss_pred ---------------------------HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888755 223355778888888888888887776665
No 234
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.81 E-value=0.0001 Score=73.83 Aligned_cols=106 Identities=16% Similarity=0.069 Sum_probs=86.9
Q ss_pred HcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHH
Q 017823 202 TIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVL 281 (365)
Q Consensus 202 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (365)
++..++++.+ .+.+....+.+++.+.++++.||+|-|+++..+.++..+..++...... ...+..+++
T Consensus 67 ~~~ws~~~k~-~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~-----------~~~~~~~~~ 134 (466)
T KOG2532|consen 67 EYDWSSTEKG-LIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAAS-----------IGFYLLLVL 134 (466)
T ss_pred eecCCHHHHH-HHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH-----------hcchhhHHH
Confidence 4567888888 8999999999999999999999999999999999999999988888742 123355666
Q ss_pred HHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 282 ICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
-.+.+++.+..+..+ ..+.++-.|+++|++..++..+.
T Consensus 135 R~lqGl~~g~~~pa~-~~i~~~W~P~~Ers~~~ail~~g 172 (466)
T KOG2532|consen 135 RFLQGLGQGVLFPAI-GSILAKWAPPNERSTFIAILTAG 172 (466)
T ss_pred HHHhHHHHhHHHhhh-hceeeeECCHHHHHHHHHHHHHH
Confidence 667777777666665 45668999999999998888777
No 235
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.78 E-value=5.7e-05 Score=76.53 Aligned_cols=124 Identities=12% Similarity=0.014 Sum_probs=112.8
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFG--RKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~G--rk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
+.+++.++.+.+.++..+...++.++.|+++|+.. ++....++.+..+++.....++++++.++..-++.|+..|...
T Consensus 327 ~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~ 406 (509)
T KOG2504|consen 327 SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFS 406 (509)
T ss_pred hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 57788999999999999999999999999999988 5666678888888888899999999999999999999999998
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccC
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKV 160 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~ 160 (365)
. ..+..+.|..+.++-..+.|+.....+++.++||++++.+.+..+
T Consensus 407 ~---------------------------l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg 452 (509)
T KOG2504|consen 407 S---------------------------LTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITG 452 (509)
T ss_pred H---------------------------HHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccC
Confidence 8 666778999999999999999999999999999999998876654
No 236
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.77 E-value=0.0051 Score=64.33 Aligned_cols=133 Identities=15% Similarity=0.208 Sum_probs=104.9
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHhhh--------HHHHHHHHHHh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRA-FGRKASILVRSTAFLAGSALRGAAFN--------IYMLIFGRVLL 79 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr-~Grk~~l~~~~~~~~~~~~~~~~a~~--------~~~~~~~r~l~ 79 (365)
+.++++.+....+...+.-...+..+++|.++|+ +||++.+.++.++..+|.++.+++.. ....+++-.+.
T Consensus 16 ~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLi 95 (654)
T TIGR00926 16 NFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALI 95 (654)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHH
Confidence 4567778888888888888889999999999996 69999999999999999888776521 23466777888
Q ss_pred hcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCC---cchhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 80 GVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKN---RGAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 80 G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~---r~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
.+|.|+.-+ ...+...|-+++++ |.....++..+.++|.++++.+...+.
T Consensus 96 a~G~GgiKp---------------------------~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~ 148 (654)
T TIGR00926 96 ALGTGGIKP---------------------------CVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILR 148 (654)
T ss_pred Hhhcccccc---------------------------CchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999988 88888888776543 566777888899999999988887776
Q ss_pred ccc----CCcchHHHH
Q 017823 157 KIK----VGWGWRISL 168 (365)
Q Consensus 157 ~~~----~~~gwr~~f 168 (365)
+.. ...+|...|
T Consensus 149 ~~~~~fg~~~~~~~aF 164 (654)
T TIGR00926 149 GDVGCFGCQDCYPLAF 164 (654)
T ss_pred HhhcccccCcchHHHH
Confidence 321 224587777
No 237
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.74 E-value=6.1e-05 Score=75.71 Aligned_cols=123 Identities=7% Similarity=-0.058 Sum_probs=105.7
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh----------hhHHHHHHHHHH
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA----------FNIYMLIFGRVL 78 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a----------~~~~~~~~~r~l 78 (365)
+..|+++++.|.+.....++..++....+++.+|++.|+.+.++.++.+++....... ++.+..+..-++
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l 360 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSII 360 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHH
Confidence 4688999999999999999999999999999999999999999999998877554311 333455566778
Q ss_pred hhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccc
Q 017823 79 LGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKI 158 (365)
Q Consensus 79 ~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 158 (365)
.+++.+.... ....++.+..|++++|...++.+...++|..+++.+++.+.+.
T Consensus 361 ~~~~~g~~~~---------------------------~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~ 413 (468)
T TIGR00788 361 AEVLAQLKFM---------------------------PFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMET 413 (468)
T ss_pred HHHHHHHHHc---------------------------cHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888 8889999999999999999999999999999999988888743
No 238
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.72 E-value=0.00012 Score=74.15 Aligned_cols=110 Identities=11% Similarity=0.003 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhh---------HHHHHHHHHHhhcchh
Q 017823 18 LTTFTSSLYIAGLIASLFA----SSVTRAFGRKASILVRSTAFLAGSALRGAAFN---------IYMLIFGRVLLGVGIG 84 (365)
Q Consensus 18 ~~~~~s~~~i~~~i~~~~~----g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~---------~~~~~~~r~l~G~~~g 84 (365)
.+++.+...+...+.+++. +++.||+++++.+.++.++.+++.+..+.+.+ .++++..+++.|+|++
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 4555556665555555555 66666777778889999999999888777755 4678999999999999
Q ss_pred hhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhh
Q 017823 85 FANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYG 154 (365)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~ 154 (365)
...| ....++.+..|++.||+.++.+....++|..++..+...
T Consensus 398 ~~~p---------------------------~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~ 440 (500)
T PRK09584 398 MISG---------------------------LGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANL 440 (500)
T ss_pred HHhH---------------------------HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 999999999999999999999998888888888777643
No 239
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.72 E-value=0.00028 Score=72.38 Aligned_cols=108 Identities=19% Similarity=0.206 Sum_probs=79.6
Q ss_pred HHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhH
Q 017823 196 APVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYA 275 (365)
Q Consensus 196 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 275 (365)
.+.+.++.|-++... ++.+...+...++.++.|.++|.+|||..++.+.++..++.++.+.. ++.
T Consensus 67 l~~I~~diG~~~~~~--w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA-------------~~~ 131 (599)
T PF06609_consen 67 LPYINADIGGSDNWS--WFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA-------------QNM 131 (599)
T ss_pred HHHHHHhcCCCccch--HHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC-------------CcH
Confidence 455567788766555 46677788899999999999999999999999999999998887765 223
Q ss_pred HHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 276 YLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
...+....+.+++.+ ...+....++|..|.+.|..+.++....
T Consensus 132 ~~~iag~~l~GvgaG--~~~~~~~~isEl~p~k~R~~~~~~~~~~ 174 (599)
T PF06609_consen 132 NTFIAGMVLYGVGAG--VQELAALAISELVPNKWRGLGLAIASIP 174 (599)
T ss_pred HHHHHHHHHHHHhhH--HHHHHHHHHHHhcccchhhhHhHHHHHH
Confidence 344555556555543 3334455579999999998877766544
No 240
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.70 E-value=0.00018 Score=53.64 Aligned_cols=65 Identities=18% Similarity=0.350 Sum_probs=55.7
Q ss_pred HHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHH
Q 017823 183 FQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQ 248 (365)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~ 248 (365)
+..+.+.....-|.|.++++.|+++.+.+ ....+..+..++++++.|.++||.++++........
T Consensus 10 f~~f~~~g~~~Pfl~~~~~~~Gl~~~~iG-il~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 10 FFYFAALGCLYPFLPLYLKQLGLSPSQIG-ILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHhhhhHhhhhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 33455667777899999999999999999 999999999999999999999999999887765543
No 241
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.68 E-value=0.0001 Score=72.31 Aligned_cols=116 Identities=12% Similarity=0.098 Sum_probs=101.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhhhh
Q 017823 14 DSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSVWL 93 (365)
Q Consensus 14 ~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~~~ 93 (365)
+.+..|.+.+..-+.-++.-.+..++.+|+|.|+.++++.++..+=-.++++++|++.+.+.+.+.|+-.+....
T Consensus 257 g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lv----- 331 (412)
T PF01306_consen 257 GNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLV----- 331 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHH-----
T ss_pred ChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHH-----
Confidence 356689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhH-HHHHHHHHHHHHHHHhhhhc
Q 017823 94 FYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIG-FQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~-~~~~~~~g~~i~~~~~~~~~ 156 (365)
....|+.+.+|+|-.+....+ .+....+|..+.+.+++.+.
T Consensus 332 ----------------------a~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~ly 373 (412)
T PF01306_consen 332 ----------------------AAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLY 373 (412)
T ss_dssp ----------------------HHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHH
T ss_pred ----------------------HHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhH
Confidence 999999999998877777666 46788889988888888887
No 242
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.60 E-value=6.9e-05 Score=73.24 Aligned_cols=119 Identities=18% Similarity=0.171 Sum_probs=88.5
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhh----hhhhHHHHH-HHHHHHHHHHHHHHhhhHHHH------------
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRA----FGRKASILV-RSTAFLAGSALRGAAFNIYML------------ 72 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr----~Grk~~l~~-~~~~~~~~~~~~~~a~~~~~~------------ 72 (365)
..|++....+.+.-...+...+.+|+.|+.+|| |||||.++. +..+..++.++.+++.++..+
T Consensus 61 ~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~r 140 (498)
T KOG0637|consen 61 SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPR 140 (498)
T ss_pred HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchH
Confidence 356667788888888888899999999999996 898887654 666778888888888655333
Q ss_pred -----HHHHHHhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcch-hhhHHHHHHHHHHH
Q 017823 73 -----IFGRVLLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGA-FNIGFQVCVATAVL 146 (365)
Q Consensus 73 -----~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~-~~~~~~~~~~~g~~ 146 (365)
+++-.+.-+..-.... .+-+++.|...+++|.+ +++++....++|..
T Consensus 141 ai~~~~lg~~LLD~A~n~~qg---------------------------p~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnv 193 (498)
T KOG0637|consen 141 AIVLFILGFWLLDVANNTLQG---------------------------PCRALLADLARGDAKKTRANSVFSFFMAVGNV 193 (498)
T ss_pred HHHHHHHHhHHHHhhhhhhhh---------------------------hHHHHHHHhccChhhhhccchhHHHHHHhcce
Confidence 3333333333333333 77788889887776666 99999999999999
Q ss_pred HHHHHhhhh
Q 017823 147 SANLLNYGT 155 (365)
Q Consensus 147 i~~~~~~~~ 155 (365)
+|...+.+.
T Consensus 194 LGY~~g~y~ 202 (498)
T KOG0637|consen 194 LGYALGSYL 202 (498)
T ss_pred eeeeccccc
Confidence 998888643
No 243
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.50 E-value=0.00091 Score=64.96 Aligned_cols=122 Identities=16% Similarity=0.098 Sum_probs=105.3
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhhHHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHhhcchh
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTR-AFGRKASILVRSTAFLAGSALRGA---AFNIYMLIFGRVLLGVGIG 84 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~d-r~Grk~~l~~~~~~~~~~~~~~~~---a~~~~~~~~~r~l~G~~~g 84 (365)
+-+|+|..+.+.++.....|..++-...|++.. |.++|+....++...+++..+..+ ..+.+.+-.+-++.|++.|
T Consensus 237 ~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G 316 (403)
T PF03209_consen 237 EVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNG 316 (403)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhh
Confidence 347889999999999999999999999998887 677777777777776666555443 3678999999999999999
Q ss_pred hhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcc
Q 017823 85 FANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQK 157 (365)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~ 157 (365)
.... ...+.+.+..++++.|..+|.+....+++..++..+++.+.|
T Consensus 317 ~f~v---------------------------gals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D 362 (403)
T PF03209_consen 317 LFTV---------------------------GALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRD 362 (403)
T ss_pred HHHH---------------------------HHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999 888889999999999999999999999999999999988764
No 244
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.46 E-value=0.00047 Score=67.65 Aligned_cols=102 Identities=17% Similarity=0.094 Sum_probs=68.5
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCch-hhHHHHHHHHH
Q 017823 205 LSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSI-GYAYLILVLIC 283 (365)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 283 (365)
+++.... .+.....++.++|+++.|++.||+|||++.....+++.++.++.+... ...++ .--+.....-.
T Consensus 81 ~ps~i~~-~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~-------~~~~~~~~m~~L~~~R~ 152 (538)
T KOG0252|consen 81 YPSGVLA-LVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSV-------GTTSPLGVMMTLCFFRF 152 (538)
T ss_pred CCchHHH-HHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCC-------CCCCCcchhhHHHHHHH
Confidence 3344445 778888899999999999999999999999999999999888555431 11111 11122222222
Q ss_pred HHHHhhccccccccccccccCCChhhhhHHHH
Q 017823 284 VYKAGFAFSWGPLRWLVPSENFPLEIISAGQI 315 (365)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~ 315 (365)
+.+++.+ +--|+..++.+|....+.||+-.+
T Consensus 153 ~LGiGIG-GDYPlSAtI~SE~an~~~RGa~ia 183 (538)
T KOG0252|consen 153 LLGIGIG-GDYPLSATIMSESANKKTRGAFIA 183 (538)
T ss_pred Hhhcccc-CCCcchHHHhhhhhhhccccceeE
Confidence 3333333 334777888899999998886443
No 245
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.43 E-value=0.00072 Score=51.16 Aligned_cols=64 Identities=13% Similarity=0.119 Sum_probs=58.1
Q ss_pred ccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 017823 9 NYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYML 72 (365)
Q Consensus 9 ~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~ 72 (365)
++.++|.++.+++.+..++|+.+|++...++.++..+++.+..+.+...+..+.+++.++++..
T Consensus 20 ~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 20 ADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 4556779999999999999999999999999999888999999999999999999999887654
No 246
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.39 E-value=9.3e-05 Score=71.26 Aligned_cols=123 Identities=15% Similarity=0.008 Sum_probs=96.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhh--hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhhh
Q 017823 15 SQLLTTFTSSLYIAGLIASLFASSVTRAFG--RKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSVW 92 (365)
Q Consensus 15 ~~~~~~~~s~~~i~~~i~~~~~g~l~dr~G--rk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~~ 92 (365)
..+.|...--..+.++++..+.|.++||++ |-.....+.+.....+....+++++.++++-++..|++.+....
T Consensus 305 ~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~da---- 380 (464)
T KOG3764|consen 305 GWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADA---- 380 (464)
T ss_pred CcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHH----
Confidence 457777777788999999999999999999 64445667777777888888999999999999999998888776
Q ss_pred hhhhcccccchhhhhHHHhhcccccceeecccCC---CC---CcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHH
Q 017823 93 LFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAP---PK---NRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRI 166 (365)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~---~~---~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~ 166 (365)
+......+..+ .+ --|...++.+.++.+|..+||.+++.+. +..|++|
T Consensus 381 -----------------------sl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv---~~iGF~w 434 (464)
T KOG3764|consen 381 -----------------------SLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLV---EAIGFEW 434 (464)
T ss_pred -----------------------HHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchhe---eehhHHH
Confidence 33222232222 22 4578999999999999999999999988 4445554
Q ss_pred H
Q 017823 167 S 167 (365)
Q Consensus 167 ~ 167 (365)
.
T Consensus 435 l 435 (464)
T KOG3764|consen 435 L 435 (464)
T ss_pred H
Confidence 4
No 247
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.25 E-value=0.00037 Score=69.58 Aligned_cols=117 Identities=13% Similarity=0.057 Sum_probs=104.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhhh
Q 017823 13 FDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSVW 92 (365)
Q Consensus 13 ~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~~ 92 (365)
-.+...|........+-...-++.+++.+|+|+-+++.+++....+=-+..+..+|+|+.+...+++|+..+..+.
T Consensus 403 ~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWa---- 478 (618)
T KOG3762|consen 403 GIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWA---- 478 (618)
T ss_pred CcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHH----
Confidence 3466777666677777888889999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHH-HHHHHHHHHHHHhhhhc
Q 017823 93 LFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQV-CVATAVLSANLLNYGTQ 156 (365)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~-~~~~g~~i~~~~~~~~~ 156 (365)
...+|++..+||+.|..+.++.+. ..++|--+|.++|+...
T Consensus 479 -----------------------a~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v 520 (618)
T KOG3762|consen 479 -----------------------AIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVV 520 (618)
T ss_pred -----------------------HHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhh
Confidence 999999999999999999999876 67788888888888777
No 248
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.21 E-value=0.0046 Score=59.20 Aligned_cols=83 Identities=19% Similarity=0.198 Sum_probs=62.3
Q ss_pred HhHHHHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHH
Q 017823 169 KYRLQFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQ 248 (365)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~ 248 (365)
+.+++.+....+.... -+.+..|.-.+.+++|+++.+.. .+.......+.+...+.|.++||+|||+..+..+++
T Consensus 34 ~Fqr~yl~vY~La~~a----DWLQGpY~Y~LY~~yg~~~~qIa-~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cil 108 (354)
T PF05631_consen 34 RFQRKYLLVYLLAMAA----DWLQGPYLYALYESYGFSEHQIA-ILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCIL 108 (354)
T ss_pred HHHHHHHHHHHHHHHH----HHhhcchhHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHH
Confidence 5555555555554433 33444455555688999999998 888888888889999999999999999998888888
Q ss_pred HHHHHHHH
Q 017823 249 MLVSRVMI 256 (365)
Q Consensus 249 ~~i~~~~~ 256 (365)
..++++.-
T Consensus 109 y~~scl~k 116 (354)
T PF05631_consen 109 YSLSCLTK 116 (354)
T ss_pred HHHHHHHH
Confidence 87777643
No 249
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.20 E-value=0.0054 Score=61.96 Aligned_cols=105 Identities=14% Similarity=-0.042 Sum_probs=75.6
Q ss_pred HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHH
Q 017823 201 RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILV 280 (365)
Q Consensus 201 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (365)
++.++..++.. ...+++.++.+++.+.++++.||++-.+.+....+...+..++-... .+.+..++
T Consensus 74 edl~~~~~~l~-~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~-------------~s~~~~ia 139 (495)
T KOG2533|consen 74 EDLKLVGNQLG-VLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAV-------------HSFPGLIA 139 (495)
T ss_pred cccchhhhhhh-hHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHH-------------hhhHHHHH
Confidence 45567777777 88999999999999999999999995444443333332222222222 34556677
Q ss_pred HHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 281 LICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.-++.+..-+.+|++... +.+.-+.+++|++-+|+.++.
T Consensus 140 lr~llGl~es~~wP~~~~-~lg~wy~~~e~g~r~~~~~a~ 178 (495)
T KOG2533|consen 140 LRFLLGLFESGGWPGVVA-ILGNWYGKSERGLRMGIWYAS 178 (495)
T ss_pred HHHHHHHHhcccchHHHH-HHHhhcChhhhhhhHHHHHHh
Confidence 777777887878877754 458999999999999998866
No 250
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.17 E-value=0.0011 Score=49.40 Aligned_cols=46 Identities=13% Similarity=0.177 Sum_probs=41.3
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTA 55 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~ 55 (365)
+.|+|+.++|.+.++..+...++++++|.++||++|++.++.....
T Consensus 29 ~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 29 QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 4788899999999999999999999999999999998887665544
No 251
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.17 E-value=0.0046 Score=61.59 Aligned_cols=118 Identities=14% Similarity=0.128 Sum_probs=89.1
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHhhcchhhhhhh
Q 017823 12 KFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAF--NIYMLIFGRVLLGVGIGFANQV 89 (365)
Q Consensus 12 ~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~--~~~~~~~~r~l~G~~~g~~~~~ 89 (365)
+.+..+..........+..++.++...+++|+|+|+++..+..+..++.++.-+.+ +.+..++..++.+++.+...+
T Consensus 268 g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~- 346 (467)
T COG2211 268 GDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANP- 346 (467)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhcccc-
Confidence 34455666777777788888899999999999999999999999999999988875 788888999999999999988
Q ss_pred hhhhhhhcccccchhhhhHHHhhcccccceeecccCC------CCC-cchhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 90 SVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAP------PKN-RGAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~------~~~-r~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
...++++|..+ .++ -|...+......=+|..++..+.++..
T Consensus 347 --------------------------l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L 394 (467)
T COG2211 347 --------------------------LPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWIL 394 (467)
T ss_pred --------------------------ccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555554432 222 356666666666666666665554443
No 252
>PRK11462 putative transporter; Provisional
Probab=97.09 E-value=0.0042 Score=62.26 Aligned_cols=114 Identities=12% Similarity=0.019 Sum_probs=70.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHhhcchhhhhhhhhhh
Q 017823 16 QLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAF--NIYMLIFGRVLLGVGIGFANQVSVWL 93 (365)
Q Consensus 16 ~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~--~~~~~~~~r~l~G~~~g~~~~~~~~~ 93 (365)
...+.+...+.++..++.+++++++||+|+|+.+..+..+.++..++..+.+ +.+.+.+.-++.|++.+...+
T Consensus 263 ~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~----- 337 (460)
T PRK11462 263 EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTP----- 337 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHH-----
Confidence 3455677788888899999999999999999987755554444333333322 233344455666776665555
Q ss_pred hhhcccccchhhhhHHHhhcccccceeecccCC-----CCCc--chhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 94 FYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAP-----PKNR--GAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-----~~~r--~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
....++.|..+ ..+| |...+......-+|..+++.+++.+.
T Consensus 338 ----------------------l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL 385 (460)
T PRK11462 338 ----------------------IQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWML 385 (460)
T ss_pred ----------------------HHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444433 1222 44455556667777777777666554
No 253
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.05 E-value=0.0039 Score=59.68 Aligned_cols=129 Identities=15% Similarity=0.048 Sum_probs=101.8
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAF-GRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~-Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
|-|+|.++.|...+...+.....++....+++|. .+|+..+.......++.....+.+.-..++- -++.|+|.|..++
T Consensus 237 ~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~ 315 (395)
T COG2807 237 DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFP 315 (395)
T ss_pred HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHH
Confidence 5688899999999999999999999999999965 5677777788888888877777755433333 4899999999999
Q ss_pred hhhhhhhhcccccchhhhhHHHhhcccccceeecccCC-CCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHH
Q 017823 89 VSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAP-PKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRIS 167 (365)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~ 167 (365)
.+...+.+..+ +++-++.++..|....+=...||.+.+.+.|..+ +|+.+
T Consensus 316 ---------------------------laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g--sw~~~ 366 (395)
T COG2807 316 ---------------------------LALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG--SWSAP 366 (395)
T ss_pred ---------------------------HHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC--ChHHH
Confidence 77777766554 4556778888888777777889999999987765 56655
Q ss_pred H
Q 017823 168 L 168 (365)
Q Consensus 168 f 168 (365)
.
T Consensus 367 ~ 367 (395)
T COG2807 367 L 367 (395)
T ss_pred H
Confidence 4
No 254
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.05 E-value=0.065 Score=52.54 Aligned_cols=71 Identities=17% Similarity=0.181 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 18 LTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 18 ~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
.+.+.-+-.+...+..+.+.+..+|...+.=+..+..+..++.++.++++|.+.-+++-++.+++.|....
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~ 131 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEV 131 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHH
Confidence 34455555566777777888889988755555667778888999999999999999999999998887776
No 255
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.98 E-value=0.18 Score=50.72 Aligned_cols=137 Identities=13% Similarity=0.136 Sum_probs=81.7
Q ss_pred chHHHHHHHHHHHHHHHH-HHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh--hhHHHH----HHHHHHhhcch---h
Q 017823 15 SQLLTTFTSSLYIAGLIA-SLFASSVTRAFGRKASILVRSTAFLAGSALRGAA--FNIYML----IFGRVLLGVGI---G 84 (365)
Q Consensus 15 ~~~~~~~~s~~~i~~~i~-~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a--~~~~~~----~~~r~l~G~~~---g 84 (365)
...+.++-+...+..++. .++.+++++|++|++.+-.....+...-.+.++. ++...+ ..-....+... +
T Consensus 42 ae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~ 121 (472)
T TIGR00769 42 AEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMG 121 (472)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHH
Confidence 467888888888877777 8899999999999999987777776666665554 111000 00000111100 0
Q ss_pred hhhhhhhhhhhhcc-cccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 85 FANQVSVWLFYFSQ-TCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 85 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
.......|..+.-. .+++-+++-+-+ ..-.++.|..++++-.|..+.+..+.++|.++++.+...+.
T Consensus 122 ~i~~~~~W~~~~FYv~~elw~~~vvS~-----lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 122 FIAILRIWSFALFYVMAELWGSVVLSL-----LFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHH-----HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00011112111000 011112221111 22345689999999999999999999999999998877765
No 256
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.97 E-value=0.03 Score=47.66 Aligned_cols=120 Identities=16% Similarity=0.118 Sum_probs=82.8
Q ss_pred hcccccchhhcHHHHHHHcCC------CcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHH
Q 017823 185 HVTRINVISFYAPVLFRTIKL------SESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGS 258 (365)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~ 258 (365)
.++++.........++++.+- ++..-. ....+......+++++...+.+++|.|+.+.++.+...+-......
T Consensus 8 ~Ftaf~t~~~i~~svi~s~~~~~~~~i~~~~G~-~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~ 86 (156)
T PF05978_consen 8 LFTAFQTQSFIQESVIHSVHERNPSSISAGLGY-YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY 86 (156)
T ss_pred HHHHHhhhhHHHHHHHHHHhhcCcccccccccH-HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 344445554455555544332 233333 5667777778888899999999999999999998887765555433
Q ss_pred HHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 259 IMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
+..+..+....+.+++.+..|.... .+..+..+++.|++-.++...+
T Consensus 87 --------------~~~~~l~~~s~l~G~~~a~lW~aqg-~ylt~~s~~~~~~~~~~ifw~i 133 (156)
T PF05978_consen 87 --------------PNSYTLYPASALLGFGAALLWTAQG-TYLTSYSTEETIGRNTGIFWAI 133 (156)
T ss_pred --------------hhHHHHHHHHHHHhhhhHHhhHhhh-HHHHHcCCHHHHhhHHHHHHHH
Confidence 2245566666677788777777764 4557888899999988887777
No 257
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.95 E-value=0.0052 Score=61.55 Aligned_cols=123 Identities=14% Similarity=0.142 Sum_probs=107.3
Q ss_pred ccCccccCCchHHHHHHHHHHHHHHHHHHHHH-HHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchh
Q 017823 6 NISNYSKFDSQLLTTFTSSLYIAGLIASLFAS-SVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIG 84 (365)
Q Consensus 6 ~~~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g-~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g 84 (365)
-++..+++++.+.+.+.+...+...+++++.. .+...+|-|+.+..|+..-.+.....+++++.|++....++.++. +
T Consensus 267 yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~-~ 345 (463)
T KOG2816|consen 267 YLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA-G 345 (463)
T ss_pred EEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh-c
Confidence 35667899999999999999999999998777 788889999999999999999999999999999999998887765 5
Q ss_pred hhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 85 FANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
...+ ...+.++.+.+++++|++.++....-++...+++.+-..+.
T Consensus 346 ~~~p---------------------------a~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 346 IVFP---------------------------AIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred chhH---------------------------HHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 6666 67888899999999999999999999999988888755543
No 258
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=96.82 E-value=0.02 Score=55.56 Aligned_cols=71 Identities=14% Similarity=0.048 Sum_probs=62.5
Q ss_pred cccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHH
Q 017823 188 RINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSI 259 (365)
Q Consensus 188 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~ 259 (365)
.........|.+.+.++.+..++. ........+..+.++..+++.+|+|+|+-++.+..++++++.++.-.
T Consensus 28 ~~~l~diLip~l~~~f~ls~~~a~-liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pA 98 (422)
T COG0738 28 ITCLNDILIPHLKEVFDLTYFEAS-LIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPA 98 (422)
T ss_pred HhhcchhhHHHHHHHhCccHHHHH-HHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhh
Confidence 344555678888899999999999 88888889999999999999999999999999999999999888654
No 259
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.79 E-value=0.0063 Score=60.83 Aligned_cols=111 Identities=12% Similarity=0.043 Sum_probs=77.3
Q ss_pred HHHHH--cCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCc-chHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhh
Q 017823 198 VLFRT--IKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGR-KVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGY 274 (365)
Q Consensus 198 ~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~gr-r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 274 (365)
.|+++ .+-+.+..+ +......++..++.++.++...|.+. |+.++.+++.+.++.++.....+. ++..
T Consensus 59 pYl~~lD~~A~~~ffG-~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~--------~~~~ 129 (488)
T KOG2325|consen 59 PYLQKLDPTATATFFG-LVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYV--------PNGV 129 (488)
T ss_pred hhhhhcCCCCCcchhh-HHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhc--------ccch
Confidence 44555 566667777 88888999999999999999999986 888889999999999988655322 3335
Q ss_pred HHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHH
Q 017823 275 AYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVA 319 (365)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~ 319 (365)
.++++++-++.+++. +...+.-.+++...-.++|.++++....
T Consensus 130 ~y~mL~~R~l~Gvg~--~n~a~lR~Y~a~~s~~~dR~rA~a~~~~ 172 (488)
T KOG2325|consen 130 KYLMLVARILTGVGV--GNFAVLRAYIADASTVEDRPRAFAATSG 172 (488)
T ss_pred HHHHHHHHHHcCcCc--ccHHHHHHHHHhccCccchHHHHHHhhh
Confidence 666666666655543 2333445566665555566666665555
No 260
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=96.68 E-value=0.011 Score=58.91 Aligned_cols=125 Identities=14% Similarity=0.224 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHhcccccchhhcHHHHHHHcC----CCcchhhHHHHHHHHHHHHHHHHHHHHHHhhh-CcchHHHHh
Q 017823 171 RLQFVMAILIPFFQHVTRINVISFYAPVLFRTIK----LSESTSLLMSAIVTGSLGTISTSLSMILADRL-GRKVLFLVG 245 (365)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~l~~~ 245 (365)
.|.......+-+.-.++.+.......-++..+.+ ++++++. .....+....-...+++|+++||+ |+|+.+..+
T Consensus 20 Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~-~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lG 98 (498)
T COG3104 20 PRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHAT-GLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLG 98 (498)
T ss_pred CchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhH-HHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Confidence 4455555666666555444443333333334555 9999988 788888888888999999999995 999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChh
Q 017823 246 GIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLE 308 (365)
Q Consensus 246 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 308 (365)
.+++.++.++++... ... .....+.+.+...+.+ ..-|-...+..|++|++
T Consensus 99 ail~~iGh~~L~~~~----------~~~-~~gl~i~L~~I~iG~G-l~K~NiS~llg~ly~~~ 149 (498)
T COG3104 99 AILMAIGHLVLAISS----------VSG-PGGLYIGLALIIVGTG-LFKPNISSLLGELYPKD 149 (498)
T ss_pred HHHHHHHHHHHhccc----------ccc-ccHHHHHHHHHHhccc-cccccHHHHHHHhcCCC
Confidence 999999999988751 001 1122222332234433 33444455668888765
No 261
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=96.54 E-value=0.024 Score=54.05 Aligned_cols=250 Identities=9% Similarity=0.034 Sum_probs=157.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhhhhhhhcccccchhhh
Q 017823 27 IAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSVWLFYFSQTCDLLNNF 106 (365)
Q Consensus 27 i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~~~~~ 106 (365)
-.+.+.-++.=.+.|..-.|++++.-.......-.+..+.++.+.+=+..+..|...+...
T Consensus 53 YSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaEI------------------- 113 (433)
T KOG3810|consen 53 YSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAEI------------------- 113 (433)
T ss_pred HHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHHH-------------------
Confidence 3455566667778998888999888777777777788889999999999999998876554
Q ss_pred hHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchH---------------------
Q 017823 107 QLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWR--------------------- 165 (365)
Q Consensus 107 ~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr--------------------- 165 (365)
..++|+-+..+|+++.++.+......-.|...|..++-.+.+... ..+.
T Consensus 114 ---------AYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~-~sy~~LN~ISL~~~~ia~~~A~fLP 183 (433)
T KOG3810|consen 114 ---------AYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLET-LSYTTLNYISLAEVTIAVLLALFLP 183 (433)
T ss_pred ---------hhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcc-cchhhhchhhHHHHHHHHHHHhhCC
Confidence 478889999999999999999888888888888877766654321 1110
Q ss_pred ----HHH---------------------------------------HhHHHHHHHHHHHHHHhcccccchhhcHHHHHHH
Q 017823 166 ----ISL---------------------------------------KYRLQFVMAILIPFFQHVTRINVISFYAPVLFRT 202 (365)
Q Consensus 166 ----~~f---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (365)
..+ .++++.+.-..++.....+++.-...|...+-++
T Consensus 184 ~v~rSl~f~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~ 263 (433)
T KOG3810|consen 184 RVKRSLYFHRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKE 263 (433)
T ss_pred CCchhhhhhcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHh
Confidence 000 2333444445555555566777777777777766
Q ss_pred cCCCcchh--hHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHH--HhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHH
Q 017823 203 IKLSESTS--LLMSAIVTGSLGTISTSLSMILADRLGRKVLFL--VGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLI 278 (365)
Q Consensus 203 ~g~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (365)
.. ++... .+..=.+..+.++++.+..|++--.+.|..-+. ++....+.....+.. ....|..
T Consensus 264 ~~-~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~-------------t~~Iw~~ 329 (433)
T KOG3810|consen 264 VA-PNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQ-------------TQHIWVC 329 (433)
T ss_pred hC-CCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhc-------------ccceehh
Confidence 54 22211 113344556667777888888865555553322 232222222222211 1335666
Q ss_pred HHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 279 LVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.+...++...+....+.....+ ++....|.-|...|+...+
T Consensus 330 Ya~yvlfr~~y~l~itiA~~~i-A~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 330 YAGYVLFRVIYQLTITIATFQI-ARNLSSELFGLVFGINTFV 370 (433)
T ss_pred hhhHHHHHhhHhhhhhHHHHHH-HHhhhhhhheeeeehHHHH
Confidence 6667777666665544443333 5556666667666665554
No 262
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.90 E-value=0.2 Score=49.46 Aligned_cols=140 Identities=14% Similarity=0.077 Sum_probs=82.6
Q ss_pred hHHHHHHHHHHHHHHhcccccchhhcHHHH--H-HHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhH
Q 017823 170 YRLQFVMAILIPFFQHVTRINVISFYAPVL--F-RTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGG 246 (365)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~ 246 (365)
++||++..+...+.. ++.......|.|.- . +-+| +.+.+. +...++.+..++..+.++|+.||+|-|....++.
T Consensus 40 y~rRW~vLl~~slL~-~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~-wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt 116 (480)
T KOG2563|consen 40 YPRRWVVLLAFSLLN-FSNGMQWIQYAPINNYVNSFYG-SSSAAD-WLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGT 116 (480)
T ss_pred chhHhHHHHHHHHHH-hcCcchheeehhHHHHHHHHhc-chHHHH-HHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHH
Confidence 455555554444433 44434444455442 2 2345 566666 8899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCchhhHH--HHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 247 IQMLVSRVMIGSIMADQIGDHGGFSIGYAY--LILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 247 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.+.+++..+=.... .+..+ +..+ .....-.+....... .-.++.-+..--+|+++|+++..+....
T Consensus 117 ~ln~iGa~Ir~iss------~p~v~-~~f~~~l~~~Gq~iaa~Aq~F-im~lPskiA~~WF~~~qra~A~~~~v~~ 184 (480)
T KOG2563|consen 117 VLNGIGAWIRLISS------LPFVP-PLFRRPLTHTGQSIAAAAQPF-ILGLPSKIAAVWFPPDQRAIATVLGVMG 184 (480)
T ss_pred HHHHHHHHHhhhcc------Ccccc-ccchhhhhHHhHHHHHHhhhH-hhccccHHHHhhCCcchhhhhhhHHHhc
Confidence 99888876655442 11111 1122 222222222111111 1112222334468999999988877666
No 263
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.30 E-value=0.11 Score=39.38 Aligned_cols=66 Identities=15% Similarity=0.008 Sum_probs=58.6
Q ss_pred hhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHH
Q 017823 193 SFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSI 259 (365)
Q Consensus 193 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~ 259 (365)
....|...++.++|.++.+ ++.+...++..+|.+...++.++.++++.+..+.+...+....+++.
T Consensus 12 TplLP~M~~~~~ls~~~ag-~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 12 TPLLPLMQADGGLSLSQAG-WLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HhHhHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457888899999999999 99999999999999999999999888888999988888888888775
No 264
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.85 E-value=0.76 Score=45.28 Aligned_cols=131 Identities=11% Similarity=-0.008 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHhcccccchhhcHHHHH-HH-cCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHH
Q 017823 172 LQFVMAILIPFFQHVTRINVISFYAPVLF-RT-IKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQM 249 (365)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~ 249 (365)
+.....+...++..+- ..-.|...|+ +. .|+++++..--+.-+-.-..++.-++...+.|.++-|++++++.+..
T Consensus 5 ~~~~llc~~gf~~~fr---PsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~ 81 (412)
T PF01770_consen 5 KITLLLCLFGFFKEFR---PSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSY 81 (412)
T ss_pred HHHHHHHHHHHHHhcC---CCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 4445555555555442 3333444444 43 78887776512233333445566677788899999999999988887
Q ss_pred HHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 250 LVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 250 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.+...++.+. ......-+.-+.++...+.-. ..+.++-...|+++--++.+.+.+.
T Consensus 82 i~t~~lll~~-------------~sv~~mq~~q~~yg~~~a~ev--ay~sYiys~v~~~~yq~vts~~raa 137 (412)
T PF01770_consen 82 IITWLLLLFG-------------TSVLAMQLMQFFYGLATAAEV--AYYSYIYSVVDKEHYQKVTSYTRAA 137 (412)
T ss_pred HHHHHHHHHH-------------CcHHHHHHHHHHHHHHHHHHH--HHHHHheeecCHHHHHHHHHHHHHH
Confidence 7777776654 223344444555554443322 2223333445777666666666655
No 265
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.81 E-value=0.0082 Score=61.43 Aligned_cols=134 Identities=10% Similarity=-0.095 Sum_probs=1.3
Q ss_pred cccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcC
Q 017823 186 VTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIG 265 (365)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~ 265 (365)
.........-.+.+-++++++.++++ .+.+..-++..+..++..+..+|-.|-+.+-.+.++++++.+++.........
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G-~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~ 94 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSG-LISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGP 94 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHH-HHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCC
Confidence 33333334445566688999999999 99999999999999999999999877788888999999999888875433221
Q ss_pred CCC---------------------------------CCchhhHHHHHHHHHHHHHhhccccc---cccccccccCCChhh
Q 017823 266 DHG---------------------------------GFSIGYAYLILVLICVYKAGFAFSWG---PLRWLVPSENFPLEI 309 (365)
Q Consensus 266 ~~~---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~e~~p~~~ 309 (365)
... .............+++..+..+++-. ++...++-|.++++.
T Consensus 95 y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~ 174 (539)
T PF03137_consen 95 YSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKN 174 (539)
T ss_dssp ---------------------------------------------------------SSS--------------------
T ss_pred CccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccccc
Confidence 100 00011122223333333344444433 456677889999998
Q ss_pred hhHHHHHHHHH
Q 017823 310 ISAGQIITVAA 320 (365)
Q Consensus 310 r~~~~~~~~~~ 320 (365)
.+...|+..++
T Consensus 175 splYiGi~~~~ 185 (539)
T PF03137_consen 175 SPLYIGILYAM 185 (539)
T ss_dssp -----------
T ss_pred CccchhhhhHH
Confidence 88888888777
No 266
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=93.91 E-value=0.067 Score=51.94 Aligned_cols=92 Identities=21% Similarity=0.301 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhh---h------HHHHHHHHHHhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhccccc
Q 017823 47 ASILVRSTAFLAGSALRGAAF---N------IYMLIFGRVLLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSV 117 (365)
Q Consensus 47 ~~l~~~~~~~~~~~~~~~~a~---~------~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (365)
|+++++.++..+|.++..++. + .+.+.++-.+.++|.|+.-+ ..
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~---------------------------ni 54 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKP---------------------------NI 54 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHH---------------------------HH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccc---------------------------cH
Confidence 577888888999988855442 2 36789999999999999999 88
Q ss_pred ceeecccCCCC---CcchhhhHHHHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 118 PLYLSEMAPPK---NRGAFNIGFQVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 118 ~~~~~e~~~~~---~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
..+..|-++++ +|.+...++..+.++|.+++..+..++. ++.||.+.|
T Consensus 55 ~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~---~~~~~~~~f 105 (372)
T PF00854_consen 55 SPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQ---QNYGWFLGF 105 (372)
T ss_dssp HHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHH---HCS-HHHHH
T ss_pred HHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhc---cccchhhhh
Confidence 88888888765 3556777889999999999999988888 556798888
No 267
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=93.45 E-value=0.32 Score=47.78 Aligned_cols=111 Identities=14% Similarity=0.075 Sum_probs=80.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH-----HHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhh
Q 017823 15 SQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTA-----FLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQV 89 (365)
Q Consensus 15 ~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~-----~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~ 89 (365)
..+..+....|.+|-.++.--...+ |+ |+..+...+- +.+.....-+.+|.|..++.-+..|+..|..+.
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV- 354 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV- 354 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH-
Confidence 5677777888888777764332221 33 3333332222 222222333458889998999999999999998
Q ss_pred hhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 90 SVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
.....+.|..|+++|...++....+.++|.+++.+++..+.
T Consensus 355 --------------------------NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 355 --------------------------NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred --------------------------HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 77777888889999999999999999999999999988765
No 268
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=92.71 E-value=2.2 Score=44.14 Aligned_cols=129 Identities=15% Similarity=0.083 Sum_probs=93.2
Q ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhhHHHHHHHHHHHHHHHHHHHhhh--------------------
Q 017823 10 YSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAF-GRKASILVRSTAFLAGSALRGAAFN-------------------- 68 (365)
Q Consensus 10 ~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~-Grk~~l~~~~~~~~~~~~~~~~a~~-------------------- 68 (365)
+++.+.....-..+.+.-......+.++.++|.| ||-+++.++.++..+|..+..++..
T Consensus 67 ~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~ 146 (571)
T KOG1237|consen 67 ELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCES 146 (571)
T ss_pred HhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccC
Confidence 3444455566666666666667778999999975 8999999999998888665544311
Q ss_pred -----HHHHHHHHHHhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCC----CCC--cchhhhHH
Q 017823 69 -----IYMLIFGRVLLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAP----PKN--RGAFNIGF 137 (365)
Q Consensus 69 -----~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~----~~~--r~~~~~~~ 137 (365)
...+..+..+..+|.|+.-+ ....+-+|-++ +++ +.....++
T Consensus 147 ~s~~q~~~~~~~l~lia~G~gg~r~---------------------------~~~~fGadQfd~~~~~~~~~~~~fFnW~ 199 (571)
T KOG1237|consen 147 PSKLQLAVLYGALYLIALGAGGIRP---------------------------CLLAFGADQFDELDPVEVKGIPSFFNWF 199 (571)
T ss_pred cchHHHHHHHHHHHHheeccCCCCC---------------------------cchhhcccccCccCcchhhCcccchhHH
Confidence 13566677778889999888 66666666665 222 34678888
Q ss_pred HHHHHHHHHHHHHHhhhhccccCCcchHHHH
Q 017823 138 QVCVATAVLSANLLNYGTQKIKVGWGWRISL 168 (365)
Q Consensus 138 ~~~~~~g~~i~~~~~~~~~~~~~~~gwr~~f 168 (365)
.....+|.+++..+..+.+ ++.+|.+-|
T Consensus 200 yf~~~~g~l~a~t~~vyiq---~~~~w~lgf 227 (571)
T KOG1237|consen 200 YFSQNGGALLAQTVLVYIQ---DNVGWKLGF 227 (571)
T ss_pred HHHHHHHHHHHHHHHHhhh---hcccceeec
Confidence 9999999999999888887 445677776
No 269
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=92.63 E-value=1.3 Score=43.97 Aligned_cols=118 Identities=18% Similarity=0.093 Sum_probs=83.5
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHH---Hhh-------hHHHHHHHHHHhhc
Q 017823 12 KFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRG---AAF-------NIYMLIFGRVLLGV 81 (365)
Q Consensus 12 ~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~---~a~-------~~~~~~~~r~l~G~ 81 (365)
|+++..+|..-+...+....+.....++.+|+|..|.=..+...-.....++. +++ +...++.+-++.-+
T Consensus 289 G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~ 368 (432)
T PF06963_consen 289 GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRI 368 (432)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999988876666554332222222 221 22333333333333
Q ss_pred chhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 82 GIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
|.=+.-. ...-++-|..|+++||..++......++--++...++..+.
T Consensus 369 GLW~fDL---------------------------~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~ 416 (432)
T PF06963_consen 369 GLWSFDL---------------------------AVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFP 416 (432)
T ss_pred HHHhhhH---------------------------HHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 3323333 45566789999999999999999999988888888776554
No 270
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=92.56 E-value=1.2 Score=39.79 Aligned_cols=116 Identities=21% Similarity=0.155 Sum_probs=68.9
Q ss_pred chhhcHHHHHHHcCCCc--chhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCC
Q 017823 191 VISFYAPVLFRTIKLSE--STSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHG 268 (365)
Q Consensus 191 ~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~ 268 (365)
......+.+..+.+.+. .... .......+...++.++.|.+.||.|||+.+..+......+.+......
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~-------- 90 (338)
T COG0477 20 LLSPALPLLLSTLSLSSGRLLYG-LLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP-------- 90 (338)
T ss_pred hHHHHHHHHHHHcCCCchhHHHH-HHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc--------
Confidence 33345556666665554 3455 677788888888889999999999999777776655334433333321
Q ss_pred CCchhhHHHHHHHHHHHHHhhccccccccccccccCCCh-hhhhHHHHHHHH
Q 017823 269 GFSIGYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPL-EIISAGQIITVA 319 (365)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~-~~r~~~~~~~~~ 319 (365)
....+...+.....+.+.+ ...+....+..|..|+ +.|+...+....
T Consensus 91 ---~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (338)
T COG0477 91 ---NVGLALLLILRLLQGLGGG-GLLPVASALLSEWFPEATERGLAVGLVTL 138 (338)
T ss_pred ---cchHHHHHHHHHHHHhhhH-HHHHHHHHHHHHhcCchhHHHHHHHHHHH
Confidence 0112222333332333332 3344556667888887 667776666665
No 271
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=92.42 E-value=1.5 Score=42.80 Aligned_cols=96 Identities=18% Similarity=0.090 Sum_probs=56.1
Q ss_pred HHHHHHHHh-----hhhhhHHHHH-HHHHHHHHHHHHHHh-----------hhHHHHHHHHHHhhcchhhhhhhhhhhhh
Q 017823 33 SLFASSVTR-----AFGRKASILV-RSTAFLAGSALRGAA-----------FNIYMLIFGRVLLGVGIGFANQVSVWLFY 95 (365)
Q Consensus 33 ~~~~g~l~d-----r~Grk~~l~~-~~~~~~~~~~~~~~a-----------~~~~~~~~~r~l~G~~~g~~~~~~~~~~~ 95 (365)
-+.+.++.| |+||||..++ +..+....+...+.- ++...+...-++.-+..+.--.
T Consensus 80 KllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDI------- 152 (510)
T KOG3574|consen 80 KLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDI------- 152 (510)
T ss_pred HHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhh-------
Confidence 357778888 9999998755 444443333333322 1222222222333333343333
Q ss_pred hcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhh
Q 017823 96 FSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGT 155 (365)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~ 155 (365)
+...+...+..+++-|-++....++...|..++..+-..+
T Consensus 153 --------------------AVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL 192 (510)
T KOG3574|consen 153 --------------------AVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLAL 192 (510)
T ss_pred --------------------hhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEe
Confidence 4455556677788889888888888888887776654443
No 272
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=92.26 E-value=14 Score=37.40 Aligned_cols=138 Identities=12% Similarity=0.130 Sum_probs=76.2
Q ss_pred chHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh---------hhH-HHHHHHHHHhhcch
Q 017823 15 SQLLTTFTSSLYI-AGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA---------FNI-YMLIFGRVLLGVGI 83 (365)
Q Consensus 15 ~~~~~~~~s~~~i-~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a---------~~~-~~~~~~r~l~G~~~ 83 (365)
+..+..+-....+ ...+......+++|+++|++++-.....+...-.+.++. ++. +.-...+...|+.
T Consensus 57 ae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~- 135 (491)
T PF03219_consen 57 AEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK- 135 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH-
Confidence 4455555554444 334556778999999999999877666666555555543 111 1111111111111
Q ss_pred hhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcc
Q 017823 84 GFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQK 157 (365)
Q Consensus 84 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~ 157 (365)
+.......|.+..-.. ....+.-|+++. .--.+..|..+.++-.|..+.+..+.++|.++++.+...+.+
T Consensus 136 ~~i~~~~~Wt~slfYv--~aElwgsvvlSl--LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYV--MAELWGSVVLSL--LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHH--HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111222332211000 001111222221 113446788888999999999999999999999988887776
No 273
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=91.88 E-value=0.59 Score=49.20 Aligned_cols=148 Identities=11% Similarity=-0.050 Sum_probs=93.3
Q ss_pred HHHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHH
Q 017823 172 LQFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLV 251 (365)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i 251 (365)
+.++..+....+.+......+..-.+.+-+.++++.++.+ .+....-++..+......+...|..|-+.+-.+.+++++
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG-~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSG-LIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGL 174 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcce-eEeeecccchhhhhHhHHHhccccCccceeeechhHHHH
Confidence 3444444444444333333333334445577899999998 888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCC------------CC---------------------CCc--hhhHHHHHHHHHHHHHhhcccc---
Q 017823 252 SRVMIGSIMADQIGD------------HG---------------------GFS--IGYAYLILVLICVYKAGFAFSW--- 293 (365)
Q Consensus 252 ~~~~~~~~~~~~~~~------------~~---------------------~~~--~~~~~~~~~~~~~~~~~~~~~~--- 293 (365)
+.++..+........ .+ +.. ........+.+++..+..+++-
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 999888763321110 00 000 0111112222333333333333
Q ss_pred ccccccccccCCChhhhhHHHHHHHHH
Q 017823 294 GPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 294 ~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.++...++-|...+++-+...|+.+++
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~ 281 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYSM 281 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHHH
Confidence 345566778888888888888888877
No 274
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=91.82 E-value=0.2 Score=49.66 Aligned_cols=146 Identities=14% Similarity=0.124 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhh----hCcchHHHHhH-
Q 017823 172 LQFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADR----LGRKVLFLVGG- 246 (365)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~grr~~l~~~~- 246 (365)
++.+....+.+..++ +......|.|.+.++.|.+..... +......+.+.+.+++.|..+|| +||||.++...
T Consensus 32 ~~li~v~~ia~Gvqf-~wA~elsy~tPyl~~lGvphk~~S-~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s 109 (498)
T KOG0637|consen 32 RKLISVASIAAGVQF-GWALELSYLTPYLQSLGVPHKWSS-IIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGS 109 (498)
T ss_pred HHHHHHHHHHHHHHH-HHHHHhccccHHHHHcCCCccccc-ccccccccccceecccccccccccccccccccchHHHhh
Confidence 344444455555555 445566688889999999999888 78888888999999999999996 68888776544
Q ss_pred HHHHHHHHHHHHHHhhhc--CCCCCCch--hhHHHHHHHHHHHHHhhccccccccccccccCCChhhhhH-HHHHHHHH
Q 017823 247 IQMLVSRVMIGSIMADQI--GDHGGFSI--GYAYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISA-GQIITVAA 320 (365)
Q Consensus 247 ~~~~i~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~-~~~~~~~~ 320 (365)
....+++.+++.....-. .+.+..+. ......++.+.+.-+..+...+|.-. +..++..++.+.+ +.+....+
T Consensus 110 ~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra-~L~Dl~~~d~~~~~Ans~f~~f 187 (498)
T KOG0637|consen 110 LLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRA-LLADLARGDAKKTRANSVFSFF 187 (498)
T ss_pred HHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHH-HHHHhccChhhhhccchhHHHH
Confidence 445555555555432211 12211111 11222233333444454556677643 4467776666666 66655555
No 275
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=91.25 E-value=3 Score=43.83 Aligned_cols=64 Identities=22% Similarity=0.188 Sum_probs=50.0
Q ss_pred cHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhh-hCcchHHHHhHHHHHHHHHHHHHH
Q 017823 195 YAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADR-LGRKVLFLVGGIQMLVSRVMIGSI 259 (365)
Q Consensus 195 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~grr~~l~~~~~~~~i~~~~~~~~ 259 (365)
+..++.+..|++++.+. ..........-+..+++|+++|+ +||++.+..+.++..++..++.+.
T Consensus 10 LvlYl~~~lg~~~~~A~-~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~ 74 (654)
T TIGR00926 10 LVLYFLNFLGFSESTST-VLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFG 74 (654)
T ss_pred HHHHHHHHcCCcHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 33344466888888887 77777777778888999999997 599999999988888888777653
No 276
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=90.95 E-value=20 Score=36.41 Aligned_cols=40 Identities=15% Similarity=0.057 Sum_probs=28.3
Q ss_pred cceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 117 VPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 117 ~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
+..+...+..+++++.++.....+.+.|..++..+-..+.
T Consensus 139 VDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlaln 178 (544)
T PF13000_consen 139 VDGWALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLALN 178 (544)
T ss_pred eehhhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhhC
Confidence 3344455667888998888888888888877776655544
No 277
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.66 E-value=6.1 Score=39.63 Aligned_cols=98 Identities=16% Similarity=0.079 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhccc
Q 017823 213 MSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAFS 292 (365)
Q Consensus 213 ~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (365)
....+.....+++.++++.+.|+++.|..+.++.....+..+.+... +.+.....-.+.+++.+..
T Consensus 54 ~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~--------------N~y~~yfssallG~Gaall 119 (461)
T KOG3098|consen 54 YGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP--------------NSYYLYFSSALLGFGAALL 119 (461)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc--------------chHHHHHHHHHhhhhHHhe
Confidence 55777788889999999999999999999999988887777776653 2566677777778888877
Q ss_pred cccccccccccCCChhhhhHHHHHHHHHHHHHH
Q 017823 293 WGPLRWLVPSENFPLEIISAGQIITVAAGVFFF 325 (365)
Q Consensus 293 ~~~~~~~~~~e~~p~~~r~~~~~~~~~~~~f~~ 325 (365)
|..- -.+.+|..++|.+.+..++..++..+..
T Consensus 120 w~Gq-G~ylt~~st~~tie~Nisi~Wai~~~~l 151 (461)
T KOG3098|consen 120 WTGQ-GGYLTSNSTRETIERNISIFWAIGQSSL 151 (461)
T ss_pred eccc-ceehhhcCChhhHHHHHHHHHHHHHHHH
Confidence 7765 4566899999999999999999844443
No 278
>PRK03612 spermidine synthase; Provisional
Probab=87.45 E-value=5.8 Score=40.56 Aligned_cols=37 Identities=11% Similarity=0.015 Sum_probs=29.4
Q ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhH
Q 017823 11 SKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKA 47 (365)
Q Consensus 11 ~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~ 47 (365)
+|-+....+.+.+++..|.++|+..++++.++.-|+.
T Consensus 45 ~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~ 81 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF 81 (521)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 4556788899999999999999999998875544433
No 279
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=87.33 E-value=14 Score=35.54 Aligned_cols=63 Identities=17% Similarity=0.213 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhh
Q 017823 25 LYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQ 88 (365)
Q Consensus 25 ~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~ 88 (365)
.++.....+.+.+.+.+++|-|+++.++.......- ..-+=+.+..++-.-...|++.+..+.
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyi-A~Nl~pr~~tlVPa~~~~G~aa~p~W~ 129 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYI-AANLEPRYETLVPAGLVLGMAAGPIWA 129 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH-HhhcchhHHhhccHHHhhccccccccc
Confidence 345556677777799999999999988887776532 222336788999999999999999998
No 280
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=83.75 E-value=1.7 Score=43.17 Aligned_cols=119 Identities=12% Similarity=0.044 Sum_probs=85.9
Q ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh----------hhHHHHHHHHHHhhc
Q 017823 12 KFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA----------FNIYMLIFGRVLLGV 81 (365)
Q Consensus 12 ~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a----------~~~~~~~~~r~l~G~ 81 (365)
++|+...+.+..+..++..++........-+..-|+++..+.++..+..+....- ++.+..+.--++..+
T Consensus 251 ~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~ 330 (433)
T PF03092_consen 251 HFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEV 330 (433)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHH
Confidence 4889999999988899999999988888888888888887777766655532211 111222222333333
Q ss_pred chhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhcc
Q 017823 82 GIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQK 157 (365)
Q Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~ 157 (365)
..+..+- ....+++|..|+..-|...++.....++|..++..++..+.+
T Consensus 331 ~~~i~~m---------------------------P~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~ 379 (433)
T PF03092_consen 331 IGMIAFM---------------------------PSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLME 379 (433)
T ss_pred HHHHHHH---------------------------HHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333 555668999999999999999999999999998888887764
No 281
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=82.87 E-value=23 Score=35.81 Aligned_cols=112 Identities=8% Similarity=-0.020 Sum_probs=63.1
Q ss_pred chhhHHHHHHHHHHHHHH-HHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhhcCC-CCC---------Cchhh--
Q 017823 208 STSLLMSAIVTGSLGTIS-TSLSMILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQIGD-HGG---------FSIGY-- 274 (365)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~-~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~-~~~---------~~~~~-- 274 (365)
+... ++-+...+...+. .++-+++++|++|++.+...........+++++..+-.... |++ .+.+.
T Consensus 43 e~i~-fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~ 121 (472)
T TIGR00769 43 EIIP-FLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMG 121 (472)
T ss_pred hhHH-HHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHH
Confidence 3344 4444444444444 78889999999999999888877777777777764321111 111 00000
Q ss_pred ------HHHHHHHHHHHHHhhccccccccccccccCCChhhhhHHHHHHHHH
Q 017823 275 ------AYLILVLICVYKAGFAFSWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 275 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
.|...+.............+-+-|..++|.+.+++-.+-.++....
T Consensus 122 ~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~g 173 (472)
T TIGR00769 122 FIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLG 173 (472)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 1111111111122222223336678889999998887777766665
No 282
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=82.69 E-value=26 Score=34.51 Aligned_cols=83 Identities=18% Similarity=0.241 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHhcccccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh-----hhCcchHHHHh
Q 017823 171 RLQFVMAILIPFFQHVTRINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILAD-----RLGRKVLFLVG 245 (365)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r~grr~~l~~~ 245 (365)
++.+...+.....+ ........ -.|.+++.-|.|.+..+ ...... --.--.++...+.| |+||||..++-
T Consensus 30 ~~~illLl~LYllQ-GiP~GL~~-~iP~lL~ak~vSyt~~a-~fS~ay--~P~sLKllWaPiVDs~y~k~~GrrksWvvp 104 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQ-GIPLGLIG-AIPLLLQAKGVSYTSQA-IFSFAY--WPFSLKLLWAPIVDSVYSKRFGRRKSWVVP 104 (510)
T ss_pred hhhHHHHHHHHHHc-CCchhHhh-hhHHHhcCCCcchhhhh-hhhhhh--hHHHHHHHHHhhhHHHHHHhhccccceeee
Confidence 44444444444444 54555555 78999987777665544 111111 11122456667777 99999987654
Q ss_pred HHHHHHHHHHHHHH
Q 017823 246 GIQMLVSRVMIGSI 259 (365)
Q Consensus 246 ~~~~~i~~~~~~~~ 259 (365)
+ ...++..+..+.
T Consensus 105 ~-q~llG~~mllLs 117 (510)
T KOG3574|consen 105 C-QYLLGLFMLLLS 117 (510)
T ss_pred h-HHHHHHHHHHHh
Confidence 2 333444444443
No 283
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=76.33 E-value=83 Score=31.06 Aligned_cols=46 Identities=13% Similarity=-0.052 Sum_probs=21.6
Q ss_pred cchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 017823 190 NVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLG 237 (365)
Q Consensus 190 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g 237 (365)
+....-.+++.+.+..+.. +. .......+.+.+..++...+--|..
T Consensus 35 N~fiTa~~y~~~~~~~~~~-~~-~F~~~~~~~a~i~~ll~~~~n~~~~ 80 (406)
T KOG1479|consen 35 NMFITASDYYYYRFPGYHN-SK-NFTSSYTLAAQIPLLLFNLLNAFLN 80 (406)
T ss_pred HhhhccHHHHHhhcCCCch-HH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444555544433322 33 4455555555555555555544443
No 284
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=67.19 E-value=40 Score=34.29 Aligned_cols=64 Identities=19% Similarity=0.237 Sum_probs=32.7
Q ss_pred hcHHHHHHH--cCCCcchhhH--HHHHHHHHHHHHHHHHHHHHHhhhCcchHHHHhHHHHHHHHHHHHH
Q 017823 194 FYAPVLFRT--IKLSESTSLL--MSAIVTGSLGTISTSLSMILADRLGRKVLFLVGGIQMLVSRVMIGS 258 (365)
Q Consensus 194 ~~~~~~~~~--~g~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~dr~grr~~l~~~~~~~~i~~~~~~~ 258 (365)
--.|.++++ .+.+.++.+. +...++.+=-.-+.++=...++|+||||..++- +...++..++..
T Consensus 21 gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP-~Q~l~g~~m~~l 88 (544)
T PF13000_consen 21 GSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIP-IQYLSGILMLYL 88 (544)
T ss_pred ccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhH-HHHHHHHHHHHH
Confidence 357888876 5665555440 111222222223333444556789999987754 333344433333
No 285
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=66.98 E-value=21 Score=35.60 Aligned_cols=63 Identities=11% Similarity=0.094 Sum_probs=53.5
Q ss_pred hhHHHHHHHHHHhhcchhhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHH
Q 017823 67 FNIYMLIFGRVLLGVGIGFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVL 146 (365)
Q Consensus 67 ~~~~~~~~~r~l~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~ 146 (365)
++-+..++.-++.|+..|-... .+..+..+..++++|..+..+...+..+|..
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s---------------------------~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~ 422 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGS---------------------------LSMCLAPRQVDPHEREVAGALMVIFLLVGLA 422 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHH---------------------------HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4556777789999999999888 7888888888899999999999999999999
Q ss_pred HHHHHhhhhc
Q 017823 147 SANLLNYGTQ 156 (365)
Q Consensus 147 i~~~~~~~~~ 156 (365)
+|..++..+.
T Consensus 423 ~Gs~l~~~~~ 432 (437)
T TIGR00939 423 LGAVLSFLFV 432 (437)
T ss_pred HHHHHHHHHH
Confidence 9988876654
No 286
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=62.65 E-value=4.7 Score=37.65 Aligned_cols=54 Identities=19% Similarity=0.060 Sum_probs=35.5
Q ss_pred cccchhhcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhhCcchHH
Q 017823 188 RINVISFYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRLGRKVLF 242 (365)
Q Consensus 188 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~l 242 (365)
+-+...-|.-++.+++|+...+.+ .+........++...+.|-++||.|||+.-
T Consensus 52 gDWLQgPYvYyLYstYgFgkG~Ig-qLfiaGfgSsmLFGtivgSLaDkqGRKrac 105 (454)
T KOG4332|consen 52 GDWLQGPYVYYLYSTYGFGKGDIG-QLFIAGFGSSMLFGTIVGSLADKQGRKRAC 105 (454)
T ss_pred hhhhcCceeeeeehhcCccCCccc-eeeecccchHHHHHHHHHHHHhhhccccce
Confidence 334444444445577888877777 444444445566667788899999999853
No 287
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=58.17 E-value=2e+02 Score=28.63 Aligned_cols=105 Identities=6% Similarity=-0.018 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCcc-hHHHHhHHHHHHHHHHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHHHhhcc
Q 017823 213 MSAIVTGSLGTISTSLSMILADRLGRK-VLFLVGGIQMLVSRVMIGSIMADQIGDHGGFSIGYAYLILVLICVYKAGFAF 291 (365)
Q Consensus 213 ~~~~~~~~~~~~~~~~~g~l~dr~grr-~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (365)
......+++..+|+.+..+.. .-++| +.+.+..+.=.+. +.+...+......+.+..-++.+..++...+++...+
T Consensus 311 i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iF-IPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG- 387 (437)
T TIGR00939 311 ICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLF-IPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG- 387 (437)
T ss_pred HHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHH-HHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh-
Confidence 667778888888888665431 11222 1333222222222 2222222111111101011234444444555555443
Q ss_pred ccccccccccccCCChhhhhHHHHHHHHH
Q 017823 292 SWGPLRWLVPSENFPLEIISAGQIITVAA 320 (365)
Q Consensus 292 ~~~~~~~~~~~e~~p~~~r~~~~~~~~~~ 320 (365)
..+.....+.++..++++|..+-.+....
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~ 416 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIF 416 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 23444455667778888887766665554
No 288
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=57.17 E-value=52 Score=32.49 Aligned_cols=114 Identities=19% Similarity=0.149 Sum_probs=74.8
Q ss_pred chHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhhHHHHHHH-HHHHHHHHHH------HHhhhHHHHHHHHHHhhcchhhh
Q 017823 15 SQLLTTFTSS-LYIAGLIASLFASSVTRAFGRKASILVRS-TAFLAGSALR------GAAFNIYMLIFGRVLLGVGIGFA 86 (365)
Q Consensus 15 ~~~~~~~~s~-~~i~~~i~~~~~g~l~dr~Grk~~l~~~~-~~~~~~~~~~------~~a~~~~~~~~~r~l~G~~~g~~ 86 (365)
....-.+..+ +++.-.+|.+.+.++-+.=.|+..+.... .++.-.-.+| .+-.+-+++++.-.++|++.|=.
T Consensus 281 ~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYl 360 (406)
T KOG1479|consen 281 DWYALLLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYL 360 (406)
T ss_pred hhhHHHHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchH
Confidence 3334444555 78888888777777666543333322211 1111111111 22356678888899999999988
Q ss_pred hhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhh
Q 017823 87 NQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGT 155 (365)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~ 155 (365)
.. ....+..+-.|++++..+-.+.......|...|..++...
T Consensus 361 ts---------------------------l~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l~ 402 (406)
T KOG1479|consen 361 TS---------------------------LIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWVF 402 (406)
T ss_pred hh---------------------------heehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 77 7788888888999988888888888888888887776543
No 289
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=51.60 E-value=29 Score=33.22 Aligned_cols=113 Identities=12% Similarity=0.016 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhhhhhh
Q 017823 17 LLTTFTSSLYIAGLIASLFASSVTRAFGR-KASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSVWLFY 95 (365)
Q Consensus 17 ~~~~~~s~~~i~~~i~~~~~g~l~dr~Gr-k~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~~~~~ 95 (365)
|.-|....|.+|..+..-......-++=+ -..+-.-..++.+......+.++++...+.-+.-|+-.|..++
T Consensus 289 qYRwyqvlYQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYV------- 361 (409)
T KOG3880|consen 289 QYRWYQVLYQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYV------- 361 (409)
T ss_pred cchhhheeeeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHH-------
Confidence 45577777766654433222211111100 1112223344555566667789999888888889988788777
Q ss_pred hcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhc
Q 017823 96 FSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQ 156 (365)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~ 156 (365)
...--+.+-.+|++|-.+++....+-.+|..++.+++..+.
T Consensus 362 --------------------NTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh 402 (409)
T KOG3880|consen 362 --------------------NTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLH 402 (409)
T ss_pred --------------------HHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccch
Confidence 55555666678899999999999999999999998887654
No 290
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=45.80 E-value=5.9 Score=37.43 Aligned_cols=108 Identities=12% Similarity=0.104 Sum_probs=3.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-hhhhHHHHHH--HHHHHHHHHHH----------HHhhhHHHHHHHHHHhhcchhhhh
Q 017823 21 FTSSLYIAGLIASLFASSVTRA-FGRKASILVR--STAFLAGSALR----------GAAFNIYMLIFGRVLLGVGIGFAN 87 (365)
Q Consensus 21 ~~s~~~i~~~i~~~~~g~l~dr-~Grk~~l~~~--~~~~~~~~~~~----------~~a~~~~~~~~~r~l~G~~~g~~~ 87 (365)
....++++-.+|....++.--+ -.+|+....+ =+++..--+++ ..-+|-+..++.-++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 3456777778887776653211 1345444321 12222222222 123455777888899999999888
Q ss_pred hhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhh
Q 017823 88 QVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGT 155 (365)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~ 155 (365)
. ....+..+..++++|..+..+...+..+|..+|..++..+
T Consensus 267 t---------------------------l~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~~ 307 (309)
T PF01733_consen 267 T---------------------------LAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFLL 307 (309)
T ss_dssp H---------------------------HHH-------------------------------------
T ss_pred h---------------------------ceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8 8888888999999999998888888888888888776544
No 291
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=42.53 E-value=2.8e+02 Score=25.70 Aligned_cols=23 Identities=9% Similarity=0.026 Sum_probs=11.9
Q ss_pred CCcchhhhHHHHHHHHHHHHHHH
Q 017823 128 KNRGAFNIGFQVCVATAVLSANL 150 (365)
Q Consensus 128 ~~r~~~~~~~~~~~~~g~~i~~~ 150 (365)
|+|+..+.....++++|.++...
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~i 24 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNI 24 (267)
T ss_pred CccceeeeeccccchhhHHHHHh
Confidence 44555555555555555555443
No 292
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=42.37 E-value=77 Score=25.07 Aligned_cols=27 Identities=19% Similarity=0.152 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 017823 17 LLTTFTSSLYIAGLIASLFASSVTRAF 43 (365)
Q Consensus 17 ~~~~~~s~~~i~~~i~~~~~g~l~dr~ 43 (365)
....-.++-+++..+-....|++.|||
T Consensus 43 ~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 43 AQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344556677788888888889999997
No 293
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=40.69 E-value=1.9e+02 Score=26.81 Aligned_cols=64 Identities=11% Similarity=0.073 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh-hhhhHHHH----HHHHHHHHHHHHHHH-h----hhHHHHHHHHHHhhcch
Q 017823 20 TFTSSLYIAGLIASLFASSVTRA-FGRKASIL----VRSTAFLAGSALRGA-A----FNIYMLIFGRVLLGVGI 83 (365)
Q Consensus 20 ~~~s~~~i~~~i~~~~~g~l~dr-~Grk~~l~----~~~~~~~~~~~~~~~-a----~~~~~~~~~r~l~G~~~ 83 (365)
...-.+..|..+|....|..... +.||+-+. .+.++..++.+.... . .+...+++.-++.|+..
T Consensus 145 ~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~ 218 (267)
T PF07672_consen 145 IFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFL 218 (267)
T ss_pred HHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHH
Confidence 33444555566666677776663 55666553 334444444444211 1 23566777777777654
No 294
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=39.21 E-value=4.6e+02 Score=27.21 Aligned_cols=65 Identities=17% Similarity=0.143 Sum_probs=47.2
Q ss_pred cHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhh-CcchHHHHhHHHHHHHHHHHHHHH
Q 017823 195 YAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMILADRL-GRKVLFLVGGIQMLVSRVMIGSIM 260 (365)
Q Consensus 195 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~l~~~~~~~~i~~~~~~~~~ 260 (365)
...++.+.++.+...+. .......-......+.+++++|.+ ||.+.+.++..+...+..++....
T Consensus 60 lv~ylt~~~~~~~~~aa-~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a 125 (571)
T KOG1237|consen 60 LVTYLTLELHASGGGAA-NNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSA 125 (571)
T ss_pred HHHHHHHHhccchHHHH-HHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444566777766665 566666666777889999999975 888888888888887766666553
No 295
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=36.37 E-value=2.4e+02 Score=23.86 Aligned_cols=33 Identities=12% Similarity=-0.154 Sum_probs=24.9
Q ss_pred ccceeecccCCCCCcchhhhHHHHHHHHHHHHH
Q 017823 116 SVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSA 148 (365)
Q Consensus 116 ~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~ 148 (365)
..+..++-.+++++.|...|+-+.-.+++.+.-
T Consensus 114 isYGilSaSWD~~r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 114 ISYGILSASWDPEREGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred hhhhhcccccCCCCCCCcccHHHHHHhHHHHHH
Confidence 344556667788889999999988888776654
No 296
>COG4769 Predicted membrane protein [Function unknown]
Probab=33.81 E-value=53 Score=28.03 Aligned_cols=50 Identities=26% Similarity=0.202 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhh
Q 017823 25 LYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFNIYMLIFGRVLLG 80 (365)
Q Consensus 25 ~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G 80 (365)
+...+++.+...-++..++|+|..-+++. +...++.+|..++++.+++.+
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgi------S~mGaF~hNl~QLivas~Lv~ 131 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGI------SVMGAFTHNLGQLIVASFLVF 131 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeeh------hhHHHHHHhHHHHHHHHHHHh
Confidence 44555666666678888999888754443 233467899999999999876
No 297
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=33.04 E-value=1.7e+02 Score=24.42 Aligned_cols=40 Identities=20% Similarity=0.202 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Q 017823 24 SLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALR 63 (365)
Q Consensus 24 ~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~ 63 (365)
=|.+++.+++.+.|++.+|..+++..........++..+.
T Consensus 61 Gyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~~ii 100 (148)
T PF02632_consen 61 GYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGLLII 100 (148)
T ss_pred hHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Confidence 4678889999999999999887644333333344444443
No 298
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=31.29 E-value=1.9e+02 Score=25.25 Aligned_cols=22 Identities=14% Similarity=0.253 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhh
Q 017823 24 SLYIAGLIASLFASSVTRAFGR 45 (365)
Q Consensus 24 ~~~i~~~i~~~~~g~l~dr~Gr 45 (365)
=|.+++.+++.+.|++.||.-+
T Consensus 90 GyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 90 GYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hHHHHHHHHHHHHHHHHHhhhc
Confidence 4678899999999999999985
No 299
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=30.71 E-value=3e+02 Score=27.36 Aligned_cols=29 Identities=10% Similarity=-0.012 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Q 017823 27 IAGLIASLFASSVTRAFGRKASILVRSTA 55 (365)
Q Consensus 27 i~~~i~~~~~g~l~dr~Grk~~l~~~~~~ 55 (365)
....+..++.|...|+..|+|++.....+
T Consensus 74 gs~lvlg~ivGq~vDg~sr~Kvi~~~L~l 102 (503)
T KOG2601|consen 74 GSQLVLGPIVGQWVDGMSRVKVIQTWLLL 102 (503)
T ss_pred hHHHhhHHHHHHHhcchhHHHHHHHHHhh
Confidence 34456667788889999999998766654
No 300
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=29.13 E-value=65 Score=31.40 Aligned_cols=93 Identities=15% Similarity=0.036 Sum_probs=64.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhH--HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcchhhhhhhhhhhhh
Q 017823 18 LTTFTSSLYIAGLIASLFASSVTRAFGRKA--SILVRSTAFLAGSALRGAAFNIYMLIFGRVLLGVGIGFANQVSVWLFY 95 (365)
Q Consensus 18 ~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~--~l~~~~~~~~~~~~~~~~a~~~~~~~~~r~l~G~~~g~~~~~~~~~~~ 95 (365)
-|..-.+..+.++++++..|++--++.|.. .+.++.+.-+...+.+.-++++|...++.++.+.......+
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~it------- 345 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTIT------- 345 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhh-------
Confidence 455666777889999999999988777653 34445555555555666678899888888888777766666
Q ss_pred hcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHH
Q 017823 96 FSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGF 137 (365)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~ 137 (365)
.+..-+++....+.-|...|+.
T Consensus 346 --------------------iA~~~iA~nL~~e~~gLvFGiN 367 (433)
T KOG3810|consen 346 --------------------IATFQIARNLSSELFGLVFGIN 367 (433)
T ss_pred --------------------HHHHHHHHhhhhhhheeeeehH
Confidence 5555556666666667766654
No 301
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=27.11 E-value=6.9e+02 Score=25.53 Aligned_cols=140 Identities=12% Similarity=0.054 Sum_probs=81.5
Q ss_pred chHHHHHHHHHHH-HHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhhh------HHHHHHHHHHhhcch----
Q 017823 15 SQLLTTFTSSLYI-AGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAAFN------IYMLIFGRVLLGVGI---- 83 (365)
Q Consensus 15 ~~~~~~~~s~~~i-~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a~~------~~~~~~~r~l~G~~~---- 83 (365)
+..+.++-+..-+ +..+..++.+++.+++.|.+++-.....+...-+++++.-- -.-....|=+++..-
T Consensus 60 ae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~ 139 (509)
T COG3202 60 AESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLK 139 (509)
T ss_pred chhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccce
Confidence 5566666666666 66778889999999999999988777777776667666411 011122232222211
Q ss_pred hhhhhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhhhccc
Q 017823 84 GFANQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYGTQKI 158 (365)
Q Consensus 84 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~~~ 158 (365)
+.......|...+-..|.= ++--++++. .......|....++-.|....++.+.+++.++++.+..++.+.
T Consensus 140 ~~ili~~~Ws~s~~Yi~aE--LWgslV~S~--lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 140 WFILIVGEWSYSLFYIMAE--LWGSLVLSL--LFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred eeeEeecchHHHHHHHHHH--HHHHHHHHH--HHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 1111112222221111100 000011110 1122345777788889999999999999999999988888753
No 302
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.46 E-value=4e+02 Score=21.16 Aligned_cols=35 Identities=14% Similarity=-0.024 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh-CcchHHHHhHH
Q 017823 213 MSAIVTGSLGTISTSLSMILADRL-GRKVLFLVGGI 247 (365)
Q Consensus 213 ~~~~~~~~~~~~~~~~~g~l~dr~-grr~~l~~~~~ 247 (365)
+-.+.=.+.+++.....||+.||+ |.++..++.+.
T Consensus 46 ~klssefIsGilVGa~iG~llD~~agTsPwglIv~l 81 (116)
T COG5336 46 FKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFL 81 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 344555667777777888999997 45554444333
No 303
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=22.06 E-value=86 Score=29.35 Aligned_cols=47 Identities=30% Similarity=0.443 Sum_probs=37.0
Q ss_pred hcHHHHHHHcCCCcchhhHHHHHHHHHHHHHHHHHHHHH---------HhhhCcchH
Q 017823 194 FYAPVLFRTIKLSESTSLLMSAIVTGSLGTISTSLSMIL---------ADRLGRKVL 241 (365)
Q Consensus 194 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~l---------~dr~grr~~ 241 (365)
.|.-.++++.|.+++... +......+...+.+++.|.. .||+|||+.
T Consensus 38 TYlllfltqiglsp~~~A-mlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~ 93 (412)
T KOG4830|consen 38 TYLLLFLTQIGLSPSSRA-MLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMS 93 (412)
T ss_pred HHHHHHHHHhcCCcchhH-HHHHhhHHHHHHhcccccccccccccHHHhhhhcceee
Confidence 355566788999998888 88888888888888888643 578999874
No 304
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=21.78 E-value=2.7e+02 Score=23.49 Aligned_cols=32 Identities=16% Similarity=0.292 Sum_probs=17.8
Q ss_pred HHHhhhCcchHHHHhHHHHHHHHHHHHHHHhhh
Q 017823 231 ILADRLGRKVLFLVGGIQMLVSRVMIGSIMADQ 263 (365)
Q Consensus 231 ~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~ 263 (365)
.++||.-||..+..+ +-.++++..+..++++.
T Consensus 56 ~Vs~RM~rRm~~~~G-iP~~lG~~~f~~~y~l~ 87 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVG-IPTALGVAVFVVFYYLK 87 (153)
T ss_pred HHHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHH
Confidence 467888777655544 44455555555444443
No 305
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=21.73 E-value=72 Score=28.89 Aligned_cols=97 Identities=16% Similarity=0.111 Sum_probs=57.2
Q ss_pred CccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHhhcchhhh
Q 017823 8 SNYSKFDSQLLTTFTSSLYIAGLIASLFASSVTRAFGRKASILVRSTAFLAGSALRGAA-FNIYMLIFGRVLLGVGIGFA 86 (365)
Q Consensus 8 ~~~~~~~~~~~~~~~s~~~i~~~i~~~~~g~l~dr~Grk~~l~~~~~~~~~~~~~~~~a-~~~~~~~~~r~l~G~~~g~~ 86 (365)
+|.+|+|..|--=+.+.|.+|..+|.++.+.++. ++..+. .++..+. .-.|+|.|..
T Consensus 131 ~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas-------------------~~a~~~~fhP~ALA---MasGvGSgSM 188 (241)
T PF11299_consen 131 SEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLAS-------------------LLASLGIFHPYALA---MASGVGSGSM 188 (241)
T ss_pred ehhcCCCCccccceEEEeeehhhHHHHHHHHHHH-------------------HHHhccCCCHHHHH---HHcCCcHHHH
Confidence 4556666766666667777777777766554432 122211 2333332 2378888888
Q ss_pred hhhhhhhhhhcccccchhhhhHHHhhcccccceeecccCCCCCcchhhhHHHHHHHHHHHHHHHHhhh
Q 017823 87 NQVSVWLFYFSQTCDLLNNFQLVLICWLQSVPLYLSEMAPPKNRGAFNIGFQVCVATAVLSANLLNYG 154 (365)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~ 154 (365)
+. .+..-+.+.+| +......+....+.-+....|..+..+
T Consensus 189 Ma---------------------------Aa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~if 228 (241)
T PF11299_consen 189 MA---------------------------AASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIF 228 (241)
T ss_pred HH---------------------------HHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88 77777788885 555566666555555555555444433
No 306
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=20.31 E-value=9.3e+02 Score=24.58 Aligned_cols=8 Identities=25% Similarity=0.804 Sum_probs=6.0
Q ss_pred CcchHHHH
Q 017823 161 GWGWRISL 168 (365)
Q Consensus 161 ~~gwr~~f 168 (365)
..||+..-
T Consensus 244 e~GWKlvh 251 (521)
T PF02990_consen 244 ESGWKLVH 251 (521)
T ss_pred ccchhhhh
Confidence 46898776
Done!