BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017825
(365 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LXV5|NFYA1_ARATH Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana
GN=NFYA1 PE=2 SV=1
Length = 272
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/250 (44%), Positives = 140/250 (56%), Gaps = 17/250 (6%)
Query: 28 SQPWWRGVGHDSTSRAMLQGGIGNISSPREPINGVLVAKTSKSQVNSGMDGGADAT-KEM 86
++PWW+ +A G N SS P NG + + ++G D T K+
Sbjct: 26 AEPWWKNNSFGVVPQARPSGIPSNSSSLDCP-NGSESNDVHSASEDGALNGENDGTWKDS 84
Query: 87 LMSVASQADGKFG--GQQPSQHSVSLMHPQFSEYLTQPSQLELVGHSIACASYPYSDSYY 144
+ +S++ G G P+ S+ MH Q L QP ELVGH IAC PY D YY
Sbjct: 85 QAATSSRSVDNHGMEGNDPAL-SIRNMHDQP---LVQPP--ELVGHYIACVPNPYQDPYY 138
Query: 145 GGAVPAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELER 204
GG + AYG Q L +G+ R ALPL+MA+EPVYVNAKQY GILRRR+ RAKAELER
Sbjct: 139 GGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARAKAELER 198
Query: 205 KLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVTNGTSLNVAVSTLPPN 264
K+I+ RKPYLHESRH HAMRRAR GGRF ++++ G G +T N
Sbjct: 199 KVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA----GEDAGGRDRERGSAT---N 251
Query: 265 SSKSESVATN 274
SS SE V T+
Sbjct: 252 SSGSEQVETD 261
>sp|Q945M9|NFYA9_ARATH Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana
GN=NFYA9 PE=2 SV=1
Length = 303
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/143 (56%), Positives = 94/143 (65%), Gaps = 8/143 (5%)
Query: 119 LTQPS-QLELVGHSIACASY-PYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMA 176
+TQP +LVGH++ AS PY D YY G + AYG L G+ +RM LP EMA
Sbjct: 105 ITQPPPHPQLVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMA 164
Query: 177 EEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVN- 235
+EPV+VNAKQY ILRRRQ RAKAELE+KLIK RKPYLHESRH HAMRR RG GGRF
Sbjct: 165 QEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKK 224
Query: 236 -----TKKLDSQTSNGTVTNGTS 253
+K+ + SNG VT S
Sbjct: 225 TNTEASKRKAEEKSNGHVTQSPS 247
>sp|Q84JP1|NFYA7_ARATH Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana
GN=NFYA7 PE=2 SV=1
Length = 190
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 84/132 (63%), Gaps = 1/132 (0%)
Query: 131 SIACASYPYSDSYYGGAV-PAYGQQALVHPQSMGVHSARMALPLEMAEEPVYVNAKQYHG 189
S+A YPY D YY P VH Q MGV + LP + EEPV+VNAKQYHG
Sbjct: 52 SMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHG 111
Query: 190 ILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVT 249
ILRRRQ RA+ E + K+IK RKPYLHESRHLHA+RR RGCGGRF+N KK D + +
Sbjct: 112 ILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSHE 171
Query: 250 NGTSLNVAVSTL 261
++L+ S +
Sbjct: 172 EKSNLSAGKSAM 183
>sp|Q9LNP6|NFYA8_ARATH Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana
GN=NFYA8 PE=2 SV=2
Length = 328
Score = 128 bits (321), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 81/115 (70%), Gaps = 6/115 (5%)
Query: 131 SIACASYPYSDSYYGGAVPA-YGQQALVHPQSMGVHSARMALPLEMAE-EPVYVNAKQYH 188
S A S+ Y+D ++GG +PA Y QA + M R+ LP ++ E EPV+VNAKQ+H
Sbjct: 127 SKANFSFHYADPHFGGLMPAAYLPQATIWNPQM----TRVPLPFDLIENEPVFVNAKQFH 182
Query: 189 GILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQT 243
I+RRRQ RAK E + KLIK RKPYLHESRH+HA++R RG GGRF+NTKKL T
Sbjct: 183 AIMRRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRFLNTKKLQEST 237
>sp|Q9SYH4|NFYA5_ARATH Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana
GN=NFYA5 PE=2 SV=1
Length = 308
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 85/130 (65%), Gaps = 14/130 (10%)
Query: 128 VGHSIACASYPYSDSYYGGAVPAYGQQ--ALVHPQSMGVHSARMALPLEMAE-EPVYVNA 184
+ S+ CA + + G P Y AL H + MG+ S+R+ LP + E EP++VNA
Sbjct: 128 ISWSLQCAE---TSHFNGFLAPEYASTPTALPHLEMMGLVSSRVPLPHHIQENEPIFVNA 184
Query: 185 KQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKL----- 239
KQYH ILRRR+ RAK E + KLIK RKPYLHESRHLHA++RARG GGRF+NTKKL
Sbjct: 185 KQYHAILRRRKHRAKLEAQNKLIKCRKPYLHESRHLHALKRARGSGGRFLNTKKLQESSN 244
Query: 240 ---DSQTSNG 246
SQ +NG
Sbjct: 245 SLCSSQMANG 254
>sp|Q93ZH2|NFYA3_ARATH Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana
GN=NFYA3 PE=2 SV=2
Length = 340
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 81/110 (73%), Gaps = 3/110 (2%)
Query: 133 ACASYPYSDSYYGGAVPA-YGQQA-LVHPQSMGVHSARMALPLEMAE-EPVYVNAKQYHG 189
A S+ Y+D +YGG + A Y QA +PQ + + R+ LP E+ E +PV+VNAKQYH
Sbjct: 131 ANFSFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVFVNAKQYHA 190
Query: 190 ILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKL 239
I+RRRQ RAK E + KLI+ RKPYLHESRH+HA++R RG GGRF+NTKKL
Sbjct: 191 IMRRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRFLNTKKL 240
>sp|Q8VY64|NFYA4_ARATH Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana
GN=NFYA4 PE=2 SV=1
Length = 198
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/114 (56%), Positives = 75/114 (65%), Gaps = 10/114 (8%)
Query: 132 IACASYPYSDSYYGGAVPAYGQQA-LVHP------QSMGVHSARMALPLEMAEEPVYVNA 184
+A YPY D YY + QQA L HP Q MG+ + L + EEPV+VNA
Sbjct: 48 MAHGLYPYPDPYYRSV---FAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNA 104
Query: 185 KQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKK 238
KQYHGILRRRQ RAK E + IK +KPY+HESRHLHA+RR RGCGGRF+N KK
Sbjct: 105 KQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKK 158
>sp|Q9LVJ7|NFYA6_ARATH Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana
GN=NFYA6 PE=2 SV=1
Length = 308
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/124 (52%), Positives = 84/124 (67%), Gaps = 8/124 (6%)
Query: 132 IACASYPYSDS---YYGG--AVPAYGQQALVHPQSMGVHSARMALPLEMAE-EPVYVNAK 185
I AS+P + ++ G + P Q + HPQ G+ +RM LP + E EP++VNAK
Sbjct: 119 IEAASWPLHGNVTPHFNGFLSFPYASQHTVQHPQIRGLVPSRMPLPHNIPENEPIFVNAK 178
Query: 186 QYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSN 245
QY ILRRR+ RAK E + KLIKVRKPYLHESRHLHA++R RG GGRF+NTKK Q SN
Sbjct: 179 QYQAILRRRERRAKLEAQNKLIKVRKPYLHESRHLHALKRVRGSGGRFLNTKK--HQESN 236
Query: 246 GTVT 249
+++
Sbjct: 237 SSLS 240
>sp|Q8LFU0|NFYAA_ARATH Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana
GN=NFYA10 PE=2 SV=2
Length = 269
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 97/216 (44%), Gaps = 38/216 (17%)
Query: 30 PWWRGVGHDSTSRAMLQGGIGNISSPREPINGVLVAKTSKSQVNSGMDGGADATKEMLMS 89
PWW G + L G + GV T Q G D +
Sbjct: 13 PWWNAFGSQPLTTESLSGEASD------SFTGVKAVTTEAEQ------GVVDKQTSTTLF 60
Query: 90 VASQADGKFGGQQPSQHSVSLMHPQFSEY-LTQPSQLELVGHSIACASYPYSDSYYGGAV 148
S K P H M E+ QP + +P+ + YYG V
Sbjct: 61 TFSPGGEKSSRDVPKPHVAFAMQSACFEFGFAQP---------MMYTKHPHVEQYYG-VV 110
Query: 149 PAYGQQALVHPQSMGVHSARMALPLEMAEE---PVYVNAKQYHGILRRRQLRAKAELERK 205
AYG Q S R+ +PL+M E +YVN+KQYHGI+RRRQ RAKAE K
Sbjct: 111 SAYGSQR---------SSGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKAE---K 158
Query: 206 LIKVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDS 241
L + RKPY+H SRHLHAMRR RG GGRF+NTK D+
Sbjct: 159 LSRCRKPYMHHSRHLHAMRRPRGSGGRFLNTKTADA 194
>sp|Q9M9X4|NFYA2_ARATH Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana
GN=NFYA2 PE=2 SV=1
Length = 295
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 88/156 (56%), Gaps = 19/156 (12%)
Query: 137 YPYSDSYYGGAVPAYGQQALVHPQSMGVHSARMALPLEMAEE--PVYVNAKQYHGILRRR 194
YPY + Y G V AYG Q+ R+ LPL M E +YVN+KQYHGI+RRR
Sbjct: 105 YPYGEQQYYGVVSAYGSQS------------RVMLPLNMETEDSTIYVNSKQYHGIIRRR 152
Query: 195 QLRAKAE--LERKLI--KVRKPYLHESRHLHAMRRARGCGGRFVNTKKLDSQTSNGTVTN 250
Q RAKA L++K + + RKPY+H SRHLHA+RR RG GGRF+NTK + + S
Sbjct: 153 QSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRPRGSGGRFLNTKSQNLENSGTNAKK 212
Query: 251 GT-SLNVAVSTLPPNSSKSESVATNYSRGTADLSTG 285
G S+ + P S+ S + GT +LS G
Sbjct: 213 GDGSMQIQSQPKPQQSNSQNSEVVHPENGTMNLSNG 248
>sp|P23708|NFYA_MOUSE Nuclear transcription factor Y subunit alpha OS=Mus musculus
GN=Nfya PE=1 SV=2
Length = 346
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 168 RMALP-LEMAEE-PVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRR 225
R+ LP EM EE P+YVNAKQYH IL+RRQ RAK E E K+ K R+ YLHESRH HAM R
Sbjct: 250 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 309
Query: 226 ARGCGGRFVNTKKLDS 241
RG GGRF + K+ DS
Sbjct: 310 KRGEGGRFFSPKEKDS 325
>sp|P23511|NFYA_HUMAN Nuclear transcription factor Y subunit alpha OS=Homo sapiens
GN=NFYA PE=1 SV=2
Length = 347
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 168 RMALP-LEMAEE-PVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRR 225
R+ LP EM EE P+YVNAKQYH IL+RRQ RAK E E K+ K R+ YLHESRH HAM R
Sbjct: 251 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 310
Query: 226 ARGCGGRFVNTKKLDS 241
RG GGRF + K+ DS
Sbjct: 311 KRGEGGRFFSPKEKDS 326
>sp|P18576|NFYA_RAT Nuclear transcription factor Y subunit alpha OS=Rattus norvegicus
GN=Nfya PE=1 SV=1
Length = 341
Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 168 RMALP-LEMAEE-PVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRR 225
R+ LP EM EE P+YVNAKQYH IL+RRQ RAK E E K+ K R+ YLHESRH HAM R
Sbjct: 245 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 304
Query: 226 ARGCGGRFVNTKKLDS 241
RG GGRF + K+ DS
Sbjct: 305 KRGEGGRFFSPKEKDS 320
>sp|Q5E9S2|NFYA_BOVIN Nuclear transcription factor Y subunit alpha OS=Bos taurus GN=NFYA
PE=2 SV=1
Length = 341
Score = 94.7 bits (234), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 49/76 (64%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 168 RMALP-LEMAEE-PVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRR 225
R+ LP EM EE P+YVNAKQYH IL+RRQ RAK E E K+ K R+ YLHESRH HAM R
Sbjct: 245 RIPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMAR 304
Query: 226 ARGCGGRFVNTKKLDS 241
RG GGRF + K+ DS
Sbjct: 305 KRGEGGRFFSPKEKDS 320
>sp|Q54S29|NFYA_DICDI Nuclear transcription factor Y subunit alpha OS=Dictyostelium
discoideum GN=nfyA PE=3 SV=1
Length = 517
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/77 (63%), Positives = 56/77 (72%), Gaps = 6/77 (7%)
Query: 167 ARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRA 226
ARMA E+ EEP+YVNAKQY+ IL+RR RAK E E KL K RK Y HESRH HA+RR
Sbjct: 221 ARMA---EIVEEPLYVNAKQYNRILKRRAARAKLESENKLPKTRKAYQHESRHQHAIRRQ 277
Query: 227 RGCGGRFV---NTKKLD 240
RGCGGRF+ + KLD
Sbjct: 278 RGCGGRFLTKADQAKLD 294
>sp|P53768|HAP2_KLULA Transcriptional activator HAP2 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=HAP2 PE=3 SV=1
Length = 300
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 52/80 (65%)
Query: 160 QSMGVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRH 219
Q H + P E E+P YVNAKQY+ IL+RR RAK E K+ + R+PYLHESRH
Sbjct: 167 QRTKPHDMNIISPSEPLEQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRH 226
Query: 220 LHAMRRARGCGGRFVNTKKL 239
HAMRR RG GGRF+ ++
Sbjct: 227 KHAMRRPRGQGGRFLTAAEM 246
>sp|P06774|HAP2_YEAST Transcriptional activator HAP2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=HAP2 PE=1 SV=1
Length = 265
Score = 88.2 bits (217), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 53/73 (72%)
Query: 175 MAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFV 234
+AE+P YVNAKQY+ IL+RR RAK E + ++ + RKPYLHESRH HAMRR RG GGRF+
Sbjct: 156 IAEQPFYVNAKQYYRILKRRYARAKLEEKLRISRERKPYLHESRHKHAMRRPRGEGGRFL 215
Query: 235 NTKKLDSQTSNGT 247
++ + S +
Sbjct: 216 TAAEIKAMKSKKS 228
>sp|P24488|HAP2_SCHPO Transcriptional activator hap2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=hap2 PE=3 SV=1
Length = 334
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 47/66 (71%), Gaps = 4/66 (6%)
Query: 178 EPV---YVNAKQYHGILRRRQLRAKAELE-RKLIKVRKPYLHESRHLHAMRRARGCGGRF 233
EPV YVNAKQYH IL+RR+ RAK E R + +KPYLHESRH HAMRR RG GGRF
Sbjct: 5 EPVEGLYVNAKQYHRILKRREARAKLEERLRGVQTTKKPYLHESRHKHAMRRPRGPGGRF 64
Query: 234 VNTKKL 239
+ K+
Sbjct: 65 LTADKV 70
>sp|A2BGG1|MTMRC_DANRE Myotubularin-related protein 12 OS=Danio rerio GN=mtmr12 PE=3 SV=1
Length = 736
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Query: 286 CREVTEPQVHKMQQQQ----RCSNGNGQTY-YEGNG--NGCYSHHQGFQLFKCHSLPDNK 338
CR VTE + ++ Q+ + G + Y+G G C+SHH G LFK S P
Sbjct: 216 CRLVTENENFELSQRLPQYFVIPSALGDLFNYQGKGLPIWCWSHHSGCALFKA-SFPSMT 274
Query: 339 VEEGDFSGQQSGRI 352
E+GDF I
Sbjct: 275 QEDGDFQSHLDTMI 288
>sp|Q318G0|HEM6_PROM9 Coproporphyrinogen-III oxidase, aerobic OS=Prochlorococcus marinus
(strain MIT 9312) GN=hemF PE=3 SV=1
Length = 342
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 179 PVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHAMRRARGCGGRFVNTKK 238
P + + +H + +A ++++ L KV KP+ E L +RG GG F
Sbjct: 137 PYLSDVRNFH----KEHKKACEKVDKDLHKVFKPWCDEYFFLKHRNESRGIGGIFY---- 188
Query: 239 LDSQTSNGTVTNGTSLNVAVSTLPPNSSKS 268
D Q +G + G + N S + N KS
Sbjct: 189 -DYQDGSGNIYRGNNQNGEASKVSENIGKS 217
>sp|Q6NLL1|Y1411_DROME WD repeat-containing protein CG11141 OS=Drosophila melanogaster
GN=CG11141 PE=1 SV=1
Length = 710
Score = 32.7 bits (73), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 163 GVHSARMALPLEMAEEPVYVNAKQYHGILRRRQLRAKAELERKLIKVRKPYLHESRHLHA 222
G H +++ P+E+ EPV NA++ + QL +E I V P ++R L
Sbjct: 412 GSHLSQLESPIELQAEPVLQNAEECFELSPVEQLNLNVPIE---IAVESPLTQQNRRLEI 468
Query: 223 MRR 225
RR
Sbjct: 469 FRR 471
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.126 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,609,460
Number of Sequences: 539616
Number of extensions: 5762645
Number of successful extensions: 11087
Number of sequences better than 100.0: 42
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 11040
Number of HSP's gapped (non-prelim): 57
length of query: 365
length of database: 191,569,459
effective HSP length: 119
effective length of query: 246
effective length of database: 127,355,155
effective search space: 31329368130
effective search space used: 31329368130
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)