Your job contains 1 sequence.
>017826
MWVLNISNILGEFRTISEFLLIKPKKRKERKDLDLMRTSWRFLSRLLHSSKRTAVLNPSS
PFNVFINDNNGKFFSILEHTNQFRGFCSVHCSKRFVLLGLVSFDNSGSNQHHKYSSNRNF
FTRAKQVKKIETTDEHSQRAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFAN
QVLLAYGLSSSRRAPDALHPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAP
ENMKYAALVICGSFIIEGASLLVAIQAVKKGAAAEGMTIRDYIWRGHDPTSVAVMTEDGA
AVTGLVIAGASLIAVNVTGNAIYDPIGSIIVGNLLGMVLFFSKIINSLIHALESPEVGNL
HMIVR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017826
(365 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2017562 - symbol:AT1G51610 species:3702 "Arabi... 1050 4.0e-106 1
FB|FBgn0033762 - symbol:CG8632 species:7227 "Drosophila m... 439 4.3e-41 1
ZFIN|ZDB-GENE-040724-254 - symbol:slc30a9 "solute carrier... 434 7.5e-41 1
UNIPROTKB|B5U335 - symbol:SLC30A9 "Solute carrier family ... 415 7.8e-39 1
UNIPROTKB|F1MDV2 - symbol:SLC30A9 "Uncharacterized protei... 413 1.3e-38 1
UNIPROTKB|Q6PML9 - symbol:SLC30A9 "Zinc transporter 9" sp... 413 1.3e-38 1
MGI|MGI:1923690 - symbol:Slc30a9 "solute carrier family 3... 410 2.6e-38 1
RGD|1593180 - symbol:Slc30a9 "solute carrier family 30 (z... 409 3.4e-38 1
UNIPROTKB|F1PHJ0 - symbol:SLC30A9 "Uncharacterized protei... 407 5.5e-38 1
UNIPROTKB|F1NWL2 - symbol:SLC30A9 "Uncharacterized protei... 405 8.9e-38 1
WB|WBGene00022174 - symbol:Y71H2AM.9 species:6239 "Caenor... 316 4.8e-28 1
TIGR_CMR|DET_0331 - symbol:DET_0331 "cation efflux family... 162 2.0e-09 1
TIGR_CMR|CHY_0502 - symbol:CHY_0502 "cation efflux family... 137 1.4e-06 1
TIGR_CMR|BA_4640 - symbol:BA_4640 "cation efflux family p... 133 3.8e-06 1
>TAIR|locus:2017562 [details] [associations]
symbol:AT1G51610 species:3702 "Arabidopsis thaliana"
[GO:0006812 "cation transport" evidence=IEA;ISS] [GO:0008324
"cation transmembrane transporter activity" evidence=IEA;ISS]
[GO:0016020 "membrane" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0015562 "efflux transmembrane transporter
activity" evidence=NAS] InterPro:IPR002524 Pfam:PF01545
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005774
EMBL:AC025294 EMBL:AC024261 TIGRFAMs:TIGR01297 GO:GO:0008324
eggNOG:COG0053 EMBL:AY050856 EMBL:AY150383 IPI:IPI00516365
PIR:G96554 RefSeq:NP_564594.1 UniGene:At.18277
ProteinModelPortal:Q8H1G3 STRING:Q8H1G3 PaxDb:Q8H1G3 PRIDE:Q8H1G3
EnsemblPlants:AT1G51610.1 GeneID:841586 KEGG:ath:AT1G51610
GeneFarm:5027 TAIR:At1g51610 HOGENOM:HOG000242618 InParanoid:Q8H1G3
KO:K14696 OMA:SNYGEEV PhylomeDB:Q8H1G3 ProtClustDB:CLSN2688684
Genevestigator:Q8H1G3 GermOnline:AT1G51610 Uniprot:Q8H1G3
Length = 457
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 222/329 (67%), Positives = 255/329 (77%)
Query: 36 MRTSWRFLSRLLHSSKR---TAVLNPSSPF--------NVFINDNNGKFFSILEHTNQFR 84
M++S R LSRLLHS ++ A + S F N F++ + F S++ ++ R
Sbjct: 1 MQSSHRILSRLLHSPRKGYIRASVGGSVHFLALFDEKDNGFVDTTHRSFSSLIRSSSHVR 60
Query: 85 GFCSVHC-SKRFVLLGLVSFDNSGSNQHHKYSSNRNFFTRAKQVKKIETTDEHSQRAVTT 143
G S +C +K + VS D + YSS+RNFFTRAKQVK+IE D+HSQRAVTT
Sbjct: 61 GLISTNCLNKGLGVRCSVSLDRE-TPLIDTYSSHRNFFTRAKQVKRIEINDQHSQRAVTT 119
Query: 144 ALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDALHPYGY 203
ALW NFLVFSLKFGVW +SSHV++AEVVHSVADFANQ LLAYGLSSSRRAPDALHPYGY
Sbjct: 120 ALWCNFLVFSLKFGVWWTSSSHVIMAEVVHSVADFANQALLAYGLSSSRRAPDALHPYGY 179
Query: 204 SKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAALVICGSFIIEGASLLV 263
SKERFVWSLISAVGIFCLGSGATIVNG+Q+LWT+ P NM+ AA+VI GSF+IEGASLLV
Sbjct: 180 SKERFVWSLISAVGIFCLGSGATIVNGVQNLWTSSPPPNMELAAVVIGGSFLIEGASLLV 239
Query: 264 AIQAVKKGAAAEGMTIRDYIWRGHDPTSVAVMTEDGAAVTGLVIAGASLIAVNVTGNAIY 323
AIQ+VKKGAA EGMTIRDYIWRGHDPTSVAVMTEDGAAV GL IA ASL+AV +TGN IY
Sbjct: 240 AIQSVKKGAAQEGMTIRDYIWRGHDPTSVAVMTEDGAAVAGLAIAAASLVAVRMTGNPIY 299
Query: 324 DPIGSIIVGNLLGMVLFFSKIINSLIHAL 352
DPIGSI+VGNLLGMV F +I HAL
Sbjct: 300 DPIGSIVVGNLLGMVAIF--LIQRNRHAL 326
>FB|FBgn0033762 [details] [associations]
symbol:CG8632 species:7227 "Drosophila melanogaster"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0006812
"cation transport" evidence=IEA] [GO:0008324 "cation transmembrane
transporter activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR002524 InterPro:IPR009061 Pfam:PF01545
EMBL:AE013599 GO:GO:0016021 GO:GO:0000166 TIGRFAMs:TIGR01297
GO:GO:0008324 SUPFAM:SSF46955 eggNOG:COG0053 KO:K14696
GeneTree:ENSGT00390000008346 RefSeq:NP_725207.1 UniGene:Dm.6173
ProteinModelPortal:A1Z935 SMR:A1Z935 PaxDb:A1Z935 PRIDE:A1Z935
EnsemblMetazoa:FBtr0087844 GeneID:36393 KEGG:dme:Dmel_CG8632
UCSC:CG8632-RB FlyBase:FBgn0033762 InParanoid:A1Z935 OMA:DPCVNVV
OrthoDB:EOG4K98T8 PhylomeDB:A1Z935 GenomeRNAi:36393 NextBio:798308
Bgee:A1Z935 Uniprot:A1Z935
Length = 660
Score = 439 (159.6 bits), Expect = 4.3e-41, P = 4.3e-41
Identities = 96/235 (40%), Positives = 140/235 (59%)
Query: 118 RNFFTRAKQVKKIETTDEHSQRAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVAD 177
R +R K + E S + V TA+ N K G WL + SH M AEV+HS+AD
Sbjct: 309 REMGSRTKVMLDNRKESEKSGQVVATAIAINAANLLFKAGGWLYSGSHSMFAEVIHSLAD 368
Query: 178 FANQVLLAYGLSSSRRAPDALHPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQHLWTA 237
NQ++LA+G+ S ++PD HPYGY R+V SLIS VGIFC+G G +I +GI +
Sbjct: 369 LINQLILAFGIYKSSQSPDIDHPYGYMNMRYVSSLISGVGIFCVGCGLSIYHGIDGILHP 428
Query: 238 EAPENMKYAALVICGSFIIEGASLLVAIQAVKKGAAAEGMTIRDYIWRGHDPTSVAVMTE 297
E ++ + ++ GS + EGA+L+VAI +K+ A M+ +DY+ G DP V+ E
Sbjct: 429 EPITDLFWVYCILMGSLVSEGATLVVAINELKRSAKENNMSFKDYVISGKDPCVNVVLCE 488
Query: 298 DGAAVTGLVIAGASLIAVNVTGNAIYDPIGSIIVGNLLGMVLFFSKIINSLIHAL 352
D AAVTG+++A A + + TG+ I+D GS+++G LLG V F II + +AL
Sbjct: 489 DAAAVTGVMVAAACMGLSSYTGSPIFDAAGSLVIGALLGAVASF--IIYTNANAL 541
>ZFIN|ZDB-GENE-040724-254 [details] [associations]
symbol:slc30a9 "solute carrier family 30 (zinc
transporter), member 9" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008324 "cation
transmembrane transporter activity" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006812 "cation transport"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006829 "zinc ion transport"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0005385 "zinc ion
transmembrane transporter activity" evidence=ISS]
InterPro:IPR002524 InterPro:IPR009061 Pfam:PF01545
ZFIN:ZDB-GENE-040724-254 GO:GO:0016021 GO:GO:0005634 GO:GO:0006355
GO:GO:0000166 GO:GO:0006351 GO:GO:0005385 TIGRFAMs:TIGR01297
SUPFAM:SSF46955 eggNOG:COG0053 HOGENOM:HOG000242618 KO:K14696
HSSP:P23025 EMBL:AL808108 EMBL:BC086961 IPI:IPI00493710
RefSeq:NP_001008575.1 UniGene:Dr.78263 ProteinModelPortal:Q5PQZ3
SMR:Q5PQZ3 STRING:Q5PQZ3 Ensembl:ENSDART00000079866 GeneID:497184
KEGG:dre:497184 CTD:10463 GeneTree:ENSGT00390000008346
HOVERGEN:HBG104893 InParanoid:Q5PQZ3 OMA:PKYTQNN OrthoDB:EOG4KD6KT
NextBio:20865883 ArrayExpress:Q5PQZ3 Bgee:Q5PQZ3 Uniprot:Q5PQZ3
Length = 573
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 97/246 (39%), Positives = 146/246 (59%)
Query: 118 RNFFTRAK-QVKKIETTDEHSQRAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVA 176
++F+ K + +K T + + V A+ N L F K W+ T S M +E +HS+A
Sbjct: 221 KDFWGNTKPRSRKRATFLQGPGKVVMVAICINGLNFFFKLLAWVYTGSASMFSEAIHSLA 280
Query: 177 DFANQVLLAYGLSSSRRAPDALHPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQHLWT 236
D NQ LLA G+S S R PDA+HPYG+S R++ SLIS VGIF +G+G + +GI L
Sbjct: 281 DTCNQALLALGISQSVRNPDAIHPYGFSNMRYIASLISGVGIFMMGAGLSWYHGIMGLLH 340
Query: 237 AEAPENMKYAALVICGSFIIEGASLLVAIQAVKKGAAAEGMTIRDYIWRGHDPTSVAVMT 296
+ E++ +A ++ GS + EGA+LLVAI +KK A +G++ +Y+ + DP++ V+
Sbjct: 341 PQPIESLLWAYCILAGSLVSEGATLLVAINEIKKSARTQGLSFYEYVMQSRDPSTNVVLL 400
Query: 297 EDGAAVTGLVIAGASLIAVNVTGNAIYDPIGSIIVGNLLGMVLFFSKIINSLIHALESPE 356
ED AAV G+V+A + ++TGN YD +GS+ VG LLG V F +I + AL
Sbjct: 401 EDAAAVLGVVLAAGCMGLTSLTGNPYYDSLGSLGVGTLLGTVSAF--LIYTNTEALLGRS 458
Query: 357 VGNLHM 362
+ HM
Sbjct: 459 IQAEHM 464
>UNIPROTKB|B5U335 [details] [associations]
symbol:SLC30A9 "Solute carrier family 30 member 9"
species:9823 "Sus scrofa" [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030374 "ligand-dependent nuclear receptor transcription
coactivator activity" evidence=IEA] [GO:0016922 "ligand-dependent
nuclear receptor binding" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008324 "cation transmembrane
transporter activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002524 InterPro:IPR009061
Pfam:PF01545 GO:GO:0016021 GO:GO:0005634 GO:GO:0005856
GO:GO:0000166 TIGRFAMs:TIGR01297 GO:GO:0008324 SUPFAM:SSF46955
eggNOG:COG0053 HOGENOM:HOG000242618 KO:K14696 CTD:10463
GeneTree:ENSGT00390000008346 HOVERGEN:HBG104893 OMA:PKYTQNN
OrthoDB:EOG4KD6KT EMBL:CU407205 EMBL:FJ164069 RefSeq:NP_001131104.1
UniGene:Ssc.72184 Ensembl:ENSSSCT00000009628 GeneID:100192440
KEGG:ssc:100192440 Uniprot:B5U335
Length = 566
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 85/203 (41%), Positives = 127/203 (62%)
Query: 139 RAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDAL 198
+ V A+ N L KF W+ T S M +E +HS++D NQ LLA G+S S + PD
Sbjct: 236 KVVIVAICINGLNCFFKFLAWIYTGSASMFSEAIHSLSDTCNQGLLALGISKSVQTPDPT 295
Query: 199 HPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAALVICGSFIIEG 258
HPYG+S R++ SLIS VGIF +G+G + +GI L + E++ +A ++ GS + EG
Sbjct: 296 HPYGFSNMRYIASLISGVGIFMMGAGLSWYHGIMGLLNPQPIESLLWAYCILAGSLVSEG 355
Query: 259 ASLLVAIQAVKKGAAAEGMTIRDYIWRGHDPTSVAVMTEDGAAVTGLVIAGASLIAVNVT 318
A+LLVAI +++ A A+GM+ Y+ DP++ ++ ED AAV G++IA + +VT
Sbjct: 356 ATLLVAINELRRSARAKGMSFYKYVMESRDPSTNVILLEDTAAVLGVIIAATCMGLTSVT 415
Query: 319 GNAIYDPIGSIIVGNLLGMVLFF 341
GN +YD +GS+ VG LLG+V F
Sbjct: 416 GNPLYDSLGSLGVGTLLGVVSAF 438
>UNIPROTKB|F1MDV2 [details] [associations]
symbol:SLC30A9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IEA]
[GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008324 "cation transmembrane transporter activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002524 InterPro:IPR009061 Pfam:PF01545 GO:GO:0016021
GO:GO:0005634 GO:GO:0005856 GO:GO:0000166 TIGRFAMs:TIGR01297
GO:GO:0008324 SUPFAM:SSF46955 KO:K14696 CTD:10463
GeneTree:ENSGT00390000008346 OMA:PKYTQNN EMBL:DAAA02017505
IPI:IPI00714898 RefSeq:XP_002688262.1 UniGene:Bt.88982
Ensembl:ENSBTAT00000061481 GeneID:522345 KEGG:bta:522345
NextBio:20873502 Uniprot:F1MDV2
Length = 566
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 83/203 (40%), Positives = 126/203 (62%)
Query: 139 RAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDAL 198
+ V A+ N L KF W+ T S M +E +HS++D NQ LLA G+S S + PD
Sbjct: 236 KVVMVAICINGLNCFFKFLAWIYTGSASMFSEAIHSLSDTCNQALLALGISKSVQTPDPT 295
Query: 199 HPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAALVICGSFIIEG 258
HPYG+S R++ SLIS VGIF +G+G + +GI L + E++ +A ++ GS + EG
Sbjct: 296 HPYGFSNMRYIASLISGVGIFMMGAGLSWYHGIMGLLNPQPIESLLWAYCILAGSLVSEG 355
Query: 259 ASLLVAIQAVKKGAAAEGMTIRDYIWRGHDPTSVAVMTEDGAAVTGLVIAGASLIAVNVT 318
A+LLVA+ +++ A A+GM+ Y+ DP++ ++ ED AAV G+ IA + ++T
Sbjct: 356 ATLLVAVNELRRSARAKGMSFYKYVMESRDPSTNVILLEDTAAVLGVTIAATCMGLTSIT 415
Query: 319 GNAIYDPIGSIIVGNLLGMVLFF 341
GN +YD +GS+ VG LLG+V F
Sbjct: 416 GNPLYDSLGSLGVGTLLGVVSAF 438
>UNIPROTKB|Q6PML9 [details] [associations]
symbol:SLC30A9 "Zinc transporter 9" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008324
"cation transmembrane transporter activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006829 "zinc ion transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=IEA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0006289 "nucleotide-excision repair"
evidence=TAS] InterPro:IPR002524 InterPro:IPR009061 Pfam:PF01545
EMBL:AF006621 GO:GO:0016021 GO:GO:0005634 GO:GO:0005856
GO:GO:0000166 GO:GO:0003700 GO:GO:0006351 GO:GO:0006829
GO:GO:0006289 TIGRFAMs:TIGR01297 GO:GO:0008324 SUPFAM:SSF46955
eggNOG:COG0053 HOGENOM:HOG000242618 KO:K14696 CTD:10463
HOVERGEN:HBG104893 OMA:PKYTQNN OrthoDB:EOG4KD6KT EMBL:AY319413
EMBL:AY594282 EMBL:AC113151 EMBL:BC007732 EMBL:BC016949
EMBL:BC022981 IPI:IPI00552548 RefSeq:NP_006336.3 UniGene:Hs.479634
PDB:2ENK PDBsum:2ENK ProteinModelPortal:Q6PML9 SMR:Q6PML9
IntAct:Q6PML9 STRING:Q6PML9 TCDB:2.A.4.6.1 PhosphoSite:Q6PML9
DMDM:74722746 PaxDb:Q6PML9 PRIDE:Q6PML9 Ensembl:ENST00000264451
GeneID:10463 KEGG:hsa:10463 UCSC:uc003gwl.3 GeneCards:GC04P041992
H-InvDB:HIX0004181 HGNC:HGNC:1329 HPA:HPA004014 MIM:604604
neXtProt:NX_Q6PML9 PharmGKB:PA25909 InParanoid:Q6PML9
ChiTaRS:SLC30A9 EvolutionaryTrace:Q6PML9 GenomeRNAi:10463
NextBio:39677 ArrayExpress:Q6PML9 Bgee:Q6PML9 CleanEx:HS_SLC30A9
Genevestigator:Q6PML9 Uniprot:Q6PML9
Length = 568
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 83/203 (40%), Positives = 127/203 (62%)
Query: 139 RAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDAL 198
+ V A+ N L KF W+ T S M +E +HS++D NQ LLA G+S S + PD
Sbjct: 238 KVVMVAICINGLNCFFKFLAWIYTGSASMFSEAIHSLSDTCNQGLLALGISKSVQTPDPS 297
Query: 199 HPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAALVICGSFIIEG 258
HPYG+S R++ SLIS VGIF +G+G + +G+ L + E++ +A ++ GS + EG
Sbjct: 298 HPYGFSNMRYISSLISGVGIFMMGAGLSWYHGVMGLLHPQPIESLLWAYCILAGSLVSEG 357
Query: 259 ASLLVAIQAVKKGAAAEGMTIRDYIWRGHDPTSVAVMTEDGAAVTGLVIAGASLIAVNVT 318
A+LLVA+ +++ A A+GM+ Y+ DP++ ++ ED AAV G++IA + ++T
Sbjct: 358 ATLLVAVNELRRNARAKGMSFYKYVMESRDPSTNVILLEDTAAVLGVIIAATCMGLTSIT 417
Query: 319 GNAIYDPIGSIIVGNLLGMVLFF 341
GN +YD +GS+ VG LLGMV F
Sbjct: 418 GNPLYDSLGSLGVGTLLGMVSAF 440
>MGI|MGI:1923690 [details] [associations]
symbol:Slc30a9 "solute carrier family 30 (zinc transporter),
member 9" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006812 "cation transport"
evidence=IEA] [GO:0006829 "zinc ion transport" evidence=IEA]
[GO:0008324 "cation transmembrane transporter activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016922 "ligand-dependent
nuclear receptor binding" evidence=IPI] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IGI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0055085 "transmembrane transport" evidence=IEA]
InterPro:IPR002524 InterPro:IPR009061 Pfam:PF01545 MGI:MGI:1923690
GO:GO:0016021 GO:GO:0005634 GO:GO:0005737 GO:GO:0005856
GO:GO:0000166 GO:GO:0045944 GO:GO:0006351 GO:GO:0003682
GO:GO:0006829 GO:GO:0030374 TIGRFAMs:TIGR01297 GO:GO:0008324
SUPFAM:SSF46955 eggNOG:COG0053 KO:K14696 HSSP:P23025 CTD:10463
GeneTree:ENSGT00390000008346 HOVERGEN:HBG104893 OMA:PKYTQNN
OrthoDB:EOG4KD6KT ChiTaRS:SLC30A9 EMBL:AY682914 EMBL:AK028885
EMBL:AK033990 EMBL:AK035541 EMBL:AK082853 EMBL:BC027806
EMBL:BC026565 EMBL:BC031705 EMBL:BC055773 EMBL:BC078440
EMBL:AF263460 IPI:IPI00854952 IPI:IPI00875609 RefSeq:NP_848766.2
UniGene:Mm.234455 ProteinModelPortal:Q5IRJ6 SMR:Q5IRJ6
STRING:Q5IRJ6 PhosphoSite:Q5IRJ6 PaxDb:Q5IRJ6 PRIDE:Q5IRJ6
Ensembl:ENSMUST00000162372 GeneID:109108 KEGG:mmu:109108
UCSC:uc008xpt.1 NextBio:361654 Bgee:Q5IRJ6 Genevestigator:Q5IRJ6
Uniprot:Q5IRJ6
Length = 567
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 84/203 (41%), Positives = 126/203 (62%)
Query: 139 RAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDAL 198
+ V A+ N L KF W+ T S M +E +HS++D NQ LLA G+S S + PD
Sbjct: 237 KVVMVAICINGLNCFFKFLAWIYTGSASMFSEAIHSLSDTCNQGLLALGISKSVQTPDPS 296
Query: 199 HPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAALVICGSFIIEG 258
HPYG+S R++ SLIS VGIF +G+G + +GI L + E++ +A ++ GS + EG
Sbjct: 297 HPYGFSNMRYISSLISGVGIFMMGAGLSWYHGIMGLLHPQPMESLLWAYCILAGSLVSEG 356
Query: 259 ASLLVAIQAVKKGAAAEGMTIRDYIWRGHDPTSVAVMTEDGAAVTGLVIAGASLIAVNVT 318
A+LLVAI +++ A A+G T Y+ DP++ ++ ED AAV G++IA + ++T
Sbjct: 357 ATLLVAINELRRSAQAKGTTFYKYVMESRDPSTNVILLEDTAAVLGVIIAATCMGLTSIT 416
Query: 319 GNAIYDPIGSIIVGNLLGMVLFF 341
GN +YD +GS+ VG LLG+V F
Sbjct: 417 GNPLYDSLGSLGVGTLLGVVSAF 439
>RGD|1593180 [details] [associations]
symbol:Slc30a9 "solute carrier family 30 (zinc transporter),
member 9" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005856 "cytoskeleton" evidence=IEA;ISO] [GO:0008324 "cation
transmembrane transporter activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016922 "ligand-dependent
nuclear receptor binding" evidence=IEA;ISO] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA;ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
InterPro:IPR002524 InterPro:IPR009061 Pfam:PF01545 RGD:1593180
GO:GO:0016021 GO:GO:0000166 TIGRFAMs:TIGR01297 GO:GO:0008324
SUPFAM:SSF46955 KO:K14696 CTD:10463 GeneTree:ENSGT00390000008346
OrthoDB:EOG4KD6KT EMBL:CH473981 IPI:IPI00951152
RefSeq:NP_001102558.1 UniGene:Rn.159709 Ensembl:ENSRNOT00000065550
GeneID:498358 KEGG:rno:498358 UCSC:RGD:1593180 NextBio:699540
Uniprot:D3ZWW5
Length = 567
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 87/214 (40%), Positives = 132/214 (61%)
Query: 139 RAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDAL 198
+ V A+ N L KF W+ T S M +E +HS++D NQ LLA G+S S + PD
Sbjct: 237 KVVMVAICINGLNCFFKFLAWIYTGSASMFSEAIHSLSDTCNQGLLALGISKSVQTPDPS 296
Query: 199 HPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAALVICGSFIIEG 258
HPYG+S R++ SLIS VGIF +G+G + +GI L + E++ +A ++ GS + EG
Sbjct: 297 HPYGFSNMRYISSLISGVGIFMMGAGLSWYHGIMGLLHPQPMESLLWAYCILAGSLVSEG 356
Query: 259 ASLLVAIQAVKKGAAAEGMTIRDYIWRGHDPTSVAVMTEDGAAVTGLVIAGASLIAVNVT 318
A+LLVAI +++ A A G + Y+ DP++ ++ ED AAV G++IA + ++T
Sbjct: 357 ATLLVAINELRRSAQANGTSFYKYVMESRDPSTNVILLEDTAAVLGVMIAATCMGLTSIT 416
Query: 319 GNAIYDPIGSIIVGNLLGMVLFFSKIINSLIHAL 352
GN +YD +GS+ VG LLG+V F +I++ I AL
Sbjct: 417 GNPLYDSLGSLGVGTLLGVVSAF--LISTNIEAL 448
>UNIPROTKB|F1PHJ0 [details] [associations]
symbol:SLC30A9 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030374 "ligand-dependent nuclear receptor transcription
coactivator activity" evidence=IEA] [GO:0016922 "ligand-dependent
nuclear receptor binding" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0008324 "cation transmembrane
transporter activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002524 InterPro:IPR009061
Pfam:PF01545 GO:GO:0016021 GO:GO:0005634 GO:GO:0005856
GO:GO:0000166 TIGRFAMs:TIGR01297 GO:GO:0008324 SUPFAM:SSF46955
GeneTree:ENSGT00390000008346 OMA:PKYTQNN EMBL:AAEX03009009
Ensembl:ENSCAFT00000002830 Uniprot:F1PHJ0
Length = 534
Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
Identities = 83/203 (40%), Positives = 125/203 (61%)
Query: 139 RAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDAL 198
+ V A+ N L KF W+ T S M +E +HS++D NQ LLA G+S S + PD
Sbjct: 204 KVVMVAICINGLNCFFKFLAWIYTGSASMFSEAIHSLSDTCNQGLLAVGISKSVQTPDPT 263
Query: 199 HPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAALVICGSFIIEG 258
HPYG+S R++ SLIS VGIF +G+G + +GI L + E++ +A ++ GS EG
Sbjct: 264 HPYGFSNMRYIASLISGVGIFMMGAGLSWYHGIMGLLNPQPMESLLWAYCILAGSLASEG 323
Query: 259 ASLLVAIQAVKKGAAAEGMTIRDYIWRGHDPTSVAVMTEDGAAVTGLVIAGASLIAVNVT 318
A+LLVA+ +++ A A+GM+ Y+ DP++ ++ ED AAV G+ IA + ++T
Sbjct: 324 ATLLVAVNELRRSARAKGMSFYKYVMESRDPSTNVILLEDTAAVLGVTIAATCMGLTSIT 383
Query: 319 GNAIYDPIGSIIVGNLLGMVLFF 341
GN +YD +GS+ VG LLG+V F
Sbjct: 384 GNPLYDSLGSLGVGTLLGVVSAF 406
>UNIPROTKB|F1NWL2 [details] [associations]
symbol:SLC30A9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008324 "cation transmembrane transporter activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0030374 "ligand-dependent nuclear receptor transcription
coactivator activity" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR002524 InterPro:IPR009061 Pfam:PF01545
GO:GO:0016021 GO:GO:0005634 GO:GO:0005856 GO:GO:0000166
TIGRFAMs:TIGR01297 GO:GO:0008324 SUPFAM:SSF46955
GeneTree:ENSGT00390000008346 OMA:PKYTQNN EMBL:AADN02031238
IPI:IPI00593832 Ensembl:ENSGALT00000023042 Uniprot:F1NWL2
Length = 472
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 83/203 (40%), Positives = 123/203 (60%)
Query: 139 RAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDAL 198
+ V A+ N L F K W+ T S M +E +HS+AD NQ LLA G+S S R PD
Sbjct: 142 KVVMVAICINGLNFFFKLLAWVYTGSASMFSEAIHSLADTCNQALLALGISQSARTPDPS 201
Query: 199 HPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAALVICGSFIIEG 258
HPYG++ R++ SLIS VGIF +G+G + +GI L E++ +A ++ GS + EG
Sbjct: 202 HPYGFTNMRYIASLISGVGIFMMGAGLSWYHGIMGLLHPHPIESLLWAYCILAGSLVSEG 261
Query: 259 ASLLVAIQAVKKGAAAEGMTIRDYIWRGHDPTSVAVMTEDGAAVTGLVIAGASLIAVNVT 318
A+LLVAI +++ A A+G++ Y+ + DP++ V+ ED AAV + +A + ++T
Sbjct: 262 ATLLVAINEIRRSARAKGLSFYQYVVQSRDPSTNVVLLEDAAAVLSVAVAATCMGLTSLT 321
Query: 319 GNAIYDPIGSIIVGNLLGMVLFF 341
GN YD +GS+ VG LLG V F
Sbjct: 322 GNPYYDSVGSLGVGTLLGTVSAF 344
>WB|WBGene00022174 [details] [associations]
symbol:Y71H2AM.9 species:6239 "Caenorhabditis elegans"
[GO:0006812 "cation transport" evidence=IEA] [GO:0008324 "cation
transmembrane transporter activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0055085 "transmembrane
transport" evidence=IEA] InterPro:IPR002524 InterPro:IPR009061
Pfam:PF01545 GO:GO:0016021 GO:GO:0000166 TIGRFAMs:TIGR01297
GO:GO:0008324 SUPFAM:SSF46955 eggNOG:COG0053 HOGENOM:HOG000242618
KO:K14696 GeneTree:ENSGT00390000008346 OMA:PKYTQNN EMBL:FO081822
EMBL:FO081556 RefSeq:NP_497603.3 ProteinModelPortal:Q3V5J4
SMR:Q3V5J4 PaxDb:Q3V5J4 EnsemblMetazoa:Y71H2AM.9 GeneID:190608
KEGG:cel:CELE_Y71H2AM.9 UCSC:Y71H2AM.9 CTD:190608
WormBase:Y71H2AM.9 InParanoid:Q3V5J4 NextBio:946358 Uniprot:Q3V5J4
Length = 495
Score = 316 (116.3 bits), Expect = 4.8e-28, P = 4.8e-28
Identities = 78/221 (35%), Positives = 114/221 (51%)
Query: 123 RAKQVKKIETTDEH--SQRAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFAN 180
R + ++ETT++H + R V A N ++KF T S + AE +HS D N
Sbjct: 146 RMRMRMRVETTNQHKGADRVVAIAFTLNLCDMAMKFTAAYLTGSKSLFAEAIHSAMDTCN 205
Query: 181 QVLLAYGLSSSRRAPDALHPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAP 240
Q++L G+ S + PD L PYGY R+V SLIS GI G G ++ +GI L E
Sbjct: 206 QLILLLGIRYSAKNPDLLFPYGYGNMRYVTSLISGCGIMAFGCGLSMYHGISGLLHPEPL 265
Query: 241 ENMKYAALVICGSFIIEGASLLVAIQAVKKGAAAEGMTIRDYIWRGHDPTSVAVMTEDGA 300
E + YA + S +G S + A + V A ++I +Y+ DP+ V+ ED A
Sbjct: 266 EPLTYAYYALFMSLCFQGTSAITAYREVFAKAKKANISIWNYVRTSADPSLNVVLLEDTA 325
Query: 301 AVTGLVIAGASLIAVNVTGNAIYDPIGSIIVGNLLGMVLFF 341
AVTG+ IA ++ + + I D GSI++G LLG V F
Sbjct: 326 AVTGVGIALCAISLSSFLNSPIPDCCGSIVIGALLGTVASF 366
>TIGR_CMR|DET_0331 [details] [associations]
symbol:DET_0331 "cation efflux family protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0006812
"cation transport" evidence=ISS] [GO:0008324 "cation transmembrane
transporter activity" evidence=ISS] [GO:0015562 "efflux
transmembrane transporter activity" evidence=ISS]
InterPro:IPR002524 Pfam:PF01545 GO:GO:0016021 EMBL:CP000027
GenomeReviews:CP000027_GR PANTHER:PTHR11562 TIGRFAMs:TIGR01297
GO:GO:0008324 eggNOG:COG0053 HOGENOM:HOG000069673
RefSeq:YP_181078.1 ProteinModelPortal:Q3Z9M1 STRING:Q3Z9M1
GeneID:3230397 KEGG:det:DET0331 PATRIC:21607731 OMA:RRYESIT
ProtClustDB:CLSK837556 BioCyc:DETH243164:GJNF-331-MONOMER
Uniprot:Q3Z9M1
Length = 311
Score = 162 (62.1 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 65/229 (28%), Positives = 110/229 (48%)
Query: 139 RAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDAL 198
RA + ++ N + +K V T S +LAE +HS D V+ +G+ +S + DA
Sbjct: 7 RAASFSIASNSTLIVMKAAVGFVTGSVSILAEAIHSTLDLVAAVIAFFGVKASDKPADAT 66
Query: 199 HPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAALVICGSFIIEG 258
HPYG+ K V + AV IF + + I I L APE +++ +VI G ++
Sbjct: 67 HPYGHGKWENVSGTVEAVLIF-VAAIWIIYEAINRLIEGSAPEMLEWG-VVIMGVSVV-- 122
Query: 259 ASLLVAIQAVKKGAAAEGMTIRDYIWRGHDPTSVAVMTEDGAAVTGLVIAGASLIAVNVT 318
A+ LV+ +KK A E ++ H T V +T G + GL++A +T
Sbjct: 123 ANTLVS-SYLKK-IARETDSVALEADASHLTTDV--ITSAGVLL-GLLLA-------KLT 170
Query: 319 GNAIYDPIGSIIVGNLLGMVLF--FSKIINSLIHA-LESPEVGNLHMIV 364
G ++ DPI +++V L+ + +K +L+ A L EV + ++
Sbjct: 171 GWSVLDPIVALLVALLIIKAAWDILNKSFGALVDARLPKEEVDAISSLI 219
>TIGR_CMR|CHY_0502 [details] [associations]
symbol:CHY_0502 "cation efflux family protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006812 "cation transport" evidence=ISS] [GO:0008324 "cation
transmembrane transporter activity" evidence=ISS] [GO:0015562
"efflux transmembrane transporter activity" evidence=ISS]
InterPro:IPR002524 Pfam:PF01545 GO:GO:0016021 EMBL:CP000141
GenomeReviews:CP000141_GR PANTHER:PTHR11562 TIGRFAMs:TIGR01297
GO:GO:0008324 eggNOG:COG0053 HOGENOM:HOG000069673
RefSeq:YP_359360.1 ProteinModelPortal:Q3AES4 STRING:Q3AES4
GeneID:3727451 KEGG:chy:CHY_0502 PATRIC:21274155 OMA:INAVWAR
ProtClustDB:CLSK2772317 BioCyc:CHYD246194:GJCN-503-MONOMER
Uniprot:Q3AES4
Length = 303
Score = 137 (53.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 53/213 (24%), Positives = 91/213 (42%)
Query: 148 NFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDALHPYGYSKER 207
N L+ K V L T S ++AE +HS D ++ + + + R D HPYG+ K
Sbjct: 16 NTLLVLFKIVVGLFTGSVSIIAEGLHSGVDLLASIITFFSVKVASRPADVRHPYGHGKVE 75
Query: 208 FVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAALVICGSFIIEGASLLVAIQA 267
+ I + IF LG+ I + W E PE++ + V+ S ++ + ++
Sbjct: 76 NIAGTIEGLLIF-LGAVLIIKEALPKFWHPEMPESLGWGMGVMAVSALV---NFFISQTL 131
Query: 268 VKKGAAAEGMTIRDYIWRGHDPTSVAVMTEDGAAVTGLVIAGASLIAVNVTGNAIYDPIG 327
+K + + W H T V T G V+ G L+ + +TG +DPI
Sbjct: 132 LKIAKETDSPALEADGW--HLRTDV--YTSAG------VLLG--LLLIKLTGITYFDPIL 179
Query: 328 SIIVGNLLGMVLF---FSKIINSLIHALESPEV 357
++IV ++ + F N + AL E+
Sbjct: 180 ALIVAGMILKAAYEITFEGFANMVDTALPEKEI 212
>TIGR_CMR|BA_4640 [details] [associations]
symbol:BA_4640 "cation efflux family protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0006812 "cation
transport" evidence=ISS] [GO:0008324 "cation transmembrane
transporter activity" evidence=ISS] [GO:0015562 "efflux
transmembrane transporter activity" evidence=ISS]
InterPro:IPR002524 Pfam:PF01545 GO:GO:0016021 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
PANTHER:PTHR11562 TIGRFAMs:TIGR01297 GO:GO:0008324
HOGENOM:HOG000062182 RefSeq:NP_846857.1 RefSeq:YP_021287.1
RefSeq:YP_030552.1 DNASU:1085522 EnsemblBacteria:EBBACT00000011259
EnsemblBacteria:EBBACT00000014373 EnsemblBacteria:EBBACT00000020418
GeneID:1085522 GeneID:2814861 GeneID:2849270 KEGG:ban:BA_4640
KEGG:bar:GBAA_4640 KEGG:bat:BAS4305 OMA:GVHSISD
ProtClustDB:CLSK872799 BioCyc:BANT260799:GJAJ-4360-MONOMER
BioCyc:BANT261594:GJ7F-4510-MONOMER Uniprot:Q81LH9
Length = 298
Score = 133 (51.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 39/159 (24%), Positives = 78/159 (49%)
Query: 147 GNFLVFSLKFGV-WLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDALHPYGYSK 205
GN ++ +K + ++G S +LA+ VHS +D + + +GL ++++ PD HPYG+ K
Sbjct: 21 GNIILAIIKAVIGYIGNSK-ALLADAVHSASDVIGSLAVLFGLRAAKQPPDEDHPYGHGK 79
Query: 206 ERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAALVICGSFIIEGASLLVAI 265
+ ++I AV +F +G I + E P+ + A+V+ S +++
Sbjct: 80 AESISAIIVAVLLFIVGIEIAISSIKAFSQELEPPKGITIFAVVL--SIVVKEGMFQYKF 137
Query: 266 QAVKKGAAAEGMTIRDYIWRGHDPTSVAVMTEDGAAVTG 304
+ K+ ++ + Y R +S+A + AA+ G
Sbjct: 138 RLGKR-VNSDAIIANAYEHRSDVFSSIAALIGICAAIIG 175
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.136 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 365 365 0.00084 117 3 11 22 0.48 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 14
No. of states in DFA: 614 (65 KB)
Total size of DFA: 236 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.76u 0.10s 31.86t Elapsed: 00:00:01
Total cpu time: 31.76u 0.10s 31.86t Elapsed: 00:00:01
Start: Fri May 10 00:10:30 2013 End: Fri May 10 00:10:31 2013