BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017826
(365 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H1G3|MTPC4_ARATH Metal tolerance protein C4 OS=Arabidopsis thaliana GN=MTPC4 PE=2
SV=1
Length = 457
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 219/329 (66%), Positives = 249/329 (75%), Gaps = 15/329 (4%)
Query: 36 MRTSWRFLSRLLHSSKR---TAVLNPSSPFNVFINDNNGKFFSILEHTN--------QFR 84
M++S R LSRLLHS ++ A + S F ++ + F + R
Sbjct: 1 MQSSHRILSRLLHSPRKGYIRASVGGSVHFLALFDEKDNGFVDTTHRSFSSLIRSSSHVR 60
Query: 85 GFCSVHC-SKRFVLLGLVSFDNSGSNQHHKYSSNRNFFTRAKQVKKIETTDEHSQRAVTT 143
G S +C +K + VS D + YSS+RNFFTRAKQVK+IE D+HSQRAVTT
Sbjct: 61 GLISTNCLNKGLGVRCSVSLDRE-TPLIDTYSSHRNFFTRAKQVKRIEINDQHSQRAVTT 119
Query: 144 ALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDALHPYGY 203
ALW NFLVFSLKFGVW +SSHV++AEVVHSVADFANQ LLAYGLSSSRRAPDALHPYGY
Sbjct: 120 ALWCNFLVFSLKFGVWWTSSSHVIMAEVVHSVADFANQALLAYGLSSSRRAPDALHPYGY 179
Query: 204 SKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAALVICGSFIIEGASLLV 263
SKERFVWSLISAVGIFCLGSGATIVNG+Q+LWT+ P NM+ AA+VI GSF+IEGASLLV
Sbjct: 180 SKERFVWSLISAVGIFCLGSGATIVNGVQNLWTSSPPPNMELAAVVIGGSFLIEGASLLV 239
Query: 264 AIQAVKKGAAAEGMTIRDYIWRGHDPTSVAVMTEDGAAVTGLVIAGASLIAVNVTGNAIY 323
AIQ+VKKGAA EGMTIRDYIWRGHDPTSVAVMTEDGAAV GL IA ASL+AV +TGN IY
Sbjct: 240 AIQSVKKGAAQEGMTIRDYIWRGHDPTSVAVMTEDGAAVAGLAIAAASLVAVRMTGNPIY 299
Query: 324 DPIGSIIVGNLLGMVLFFSKIINSLIHAL 352
DPIGSI+VGNLLGMV F +I HAL
Sbjct: 300 DPIGSIVVGNLLGMVAIF--LIQRNRHAL 326
>sp|Q5PQZ3|ZNT9_DANRE Zinc transporter 9 OS=Danio rerio GN=slc30a9 PE=2 SV=1
Length = 573
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 136/224 (60%), Gaps = 2/224 (0%)
Query: 139 RAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDAL 198
+ V A+ N L F K W+ T S M +E +HS+AD NQ LLA G+S S R PDA+
Sbjct: 243 KVVMVAICINGLNFFFKLLAWVYTGSASMFSEAIHSLADTCNQALLALGISQSVRNPDAI 302
Query: 199 HPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAALVICGSFIIEG 258
HPYG+S R++ SLIS VGIF +G+G + +GI L + E++ +A ++ GS + EG
Sbjct: 303 HPYGFSNMRYIASLISGVGIFMMGAGLSWYHGIMGLLHPQPIESLLWAYCILAGSLVSEG 362
Query: 259 ASLLVAIQAVKKGAAAEGMTIRDYIWRGHDPTSVAVMTEDGAAVTGLVIAGASLIAVNVT 318
A+LLVAI +KK A +G++ +Y+ + DP++ V+ ED AAV G+V+A + ++T
Sbjct: 363 ATLLVAINEIKKSARTQGLSFYEYVMQSRDPSTNVVLLEDAAAVLGVVLAAGCMGLTSLT 422
Query: 319 GNAIYDPIGSIIVGNLLGMVLFFSKIINSLIHALESPEVGNLHM 362
GN YD +GS+ VG LLG V F +I + AL + HM
Sbjct: 423 GNPYYDSLGSLGVGTLLGTVSAF--LIYTNTEALLGRSIQAEHM 464
>sp|Q6DCE3|ZNT9_XENLA Zinc transporter 9 OS=Xenopus laevis GN=slc30a9 PE=2 SV=1
Length = 559
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/203 (42%), Positives = 128/203 (63%)
Query: 139 RAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDAL 198
+ V A+ N L F K W+ T S M +E +HS+AD NQ LLA G+S S R PD
Sbjct: 229 KVVIVAICINGLNFFFKLLAWVYTGSASMFSEALHSLADTLNQALLALGISQSARTPDPG 288
Query: 199 HPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAALVICGSFIIEG 258
HPYG++ R++ SLIS VGIF +G+G + +GI L + E++ +A ++ GS + EG
Sbjct: 289 HPYGFTNMRYIASLISGVGIFMMGAGLSWYHGIIGLLHPQPIESLLWAYCILAGSLVSEG 348
Query: 259 ASLLVAIQAVKKGAAAEGMTIRDYIWRGHDPTSVAVMTEDGAAVTGLVIAGASLIAVNVT 318
A+LLVAI ++K + A+G++ Y+ + DP++ V+ ED AAV GLV+A + + ++T
Sbjct: 349 ATLLVAINEIRKSSRAKGLSFYQYVMQSRDPSTNVVLMEDAAAVLGLVMAASCMGLTSLT 408
Query: 319 GNAIYDPIGSIIVGNLLGMVLFF 341
GN +YD +GS+ VG LLG V F
Sbjct: 409 GNPLYDSLGSLGVGTLLGAVSAF 431
>sp|Q5R4H0|ZNT9_PONAB Zinc transporter 9 OS=Pongo abelii GN=SLC30A9 PE=2 SV=1
Length = 569
Score = 165 bits (417), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 127/203 (62%)
Query: 139 RAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDAL 198
+ V A+ N L KF W+ T S M +E +HS++D NQ LLA G+S S + PD
Sbjct: 239 KVVMVAICINGLNCFFKFLAWIYTGSASMFSEAIHSLSDTCNQGLLALGISKSVQTPDPS 298
Query: 199 HPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAALVICGSFIIEG 258
HPYG+S R++ SLIS VGIF +G+G + +G+ L + E++ +A ++ GS + EG
Sbjct: 299 HPYGFSNMRYISSLISGVGIFMMGAGLSWYHGVMGLLHPQPIESLLWAYCILAGSLVSEG 358
Query: 259 ASLLVAIQAVKKGAAAEGMTIRDYIWRGHDPTSVAVMTEDGAAVTGLVIAGASLIAVNVT 318
A+LLVA+ +++ A A+GM+ Y+ DP++ ++ ED AAV G++IA + ++T
Sbjct: 359 ATLLVAVNELRRNARAKGMSFYKYVMESRDPSTNVILLEDTAAVLGVIIAATCMGLTSIT 418
Query: 319 GNAIYDPIGSIIVGNLLGMVLFF 341
GN +YD +GS+ VG LLGMV F
Sbjct: 419 GNPLYDSLGSLGVGTLLGMVSAF 441
>sp|Q6PML9|ZNT9_HUMAN Zinc transporter 9 OS=Homo sapiens GN=SLC30A9 PE=1 SV=1
Length = 568
Score = 165 bits (417), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 127/203 (62%)
Query: 139 RAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDAL 198
+ V A+ N L KF W+ T S M +E +HS++D NQ LLA G+S S + PD
Sbjct: 238 KVVMVAICINGLNCFFKFLAWIYTGSASMFSEAIHSLSDTCNQGLLALGISKSVQTPDPS 297
Query: 199 HPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAALVICGSFIIEG 258
HPYG+S R++ SLIS VGIF +G+G + +G+ L + E++ +A ++ GS + EG
Sbjct: 298 HPYGFSNMRYISSLISGVGIFMMGAGLSWYHGVMGLLHPQPIESLLWAYCILAGSLVSEG 357
Query: 259 ASLLVAIQAVKKGAAAEGMTIRDYIWRGHDPTSVAVMTEDGAAVTGLVIAGASLIAVNVT 318
A+LLVA+ +++ A A+GM+ Y+ DP++ ++ ED AAV G++IA + ++T
Sbjct: 358 ATLLVAVNELRRNARAKGMSFYKYVMESRDPSTNVILLEDTAAVLGVIIAATCMGLTSIT 417
Query: 319 GNAIYDPIGSIIVGNLLGMVLFF 341
GN +YD +GS+ VG LLGMV F
Sbjct: 418 GNPLYDSLGSLGVGTLLGMVSAF 440
>sp|Q5IRJ6|ZNT9_MOUSE Zinc transporter 9 OS=Mus musculus GN=Slc30a9 PE=1 SV=2
Length = 567
Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 126/203 (62%)
Query: 139 RAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDAL 198
+ V A+ N L KF W+ T S M +E +HS++D NQ LLA G+S S + PD
Sbjct: 237 KVVMVAICINGLNCFFKFLAWIYTGSASMFSEAIHSLSDTCNQGLLALGISKSVQTPDPS 296
Query: 199 HPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAALVICGSFIIEG 258
HPYG+S R++ SLIS VGIF +G+G + +GI L + E++ +A ++ GS + EG
Sbjct: 297 HPYGFSNMRYISSLISGVGIFMMGAGLSWYHGIMGLLHPQPMESLLWAYCILAGSLVSEG 356
Query: 259 ASLLVAIQAVKKGAAAEGMTIRDYIWRGHDPTSVAVMTEDGAAVTGLVIAGASLIAVNVT 318
A+LLVAI +++ A A+G T Y+ DP++ ++ ED AAV G++IA + ++T
Sbjct: 357 ATLLVAINELRRSAQAKGTTFYKYVMESRDPSTNVILLEDTAAVLGVIIAATCMGLTSIT 416
Query: 319 GNAIYDPIGSIIVGNLLGMVLFF 341
GN +YD +GS+ VG LLG+V F
Sbjct: 417 GNPLYDSLGSLGVGTLLGVVSAF 439
>sp|Q08970|MMT2_YEAST Mitochondrial metal transporter 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MMT2 PE=1 SV=2
Length = 484
Score = 38.5 bits (88), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 164 SHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDALHPYGYSKERFVWSL 212
S +LA+ VH+++D + L + + + R P + +PYGY K V SL
Sbjct: 156 SQALLADSVHALSDLVSDFLTLFSVQYASRKPTSEYPYGYGKVETVGSL 204
>sp|C0SP78|YDFM_BACSU Uncharacterized transporter YdfM OS=Bacillus subtilis (strain 168)
GN=ydfM PE=3 SV=1
Length = 297
Score = 38.5 bits (88), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Query: 134 DEHSQRAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRR 193
++ S++ AL N ++ + K L S + A+ +HS AD + + + S +
Sbjct: 6 EQISRKVALIALIANLILMAGKVFFGLVGDSEAVFADGIHSAADVVASIAVLAVIGISNK 65
Query: 194 APDALHPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAAL 248
PD HP+G+ K + I + I + S ++ I L + P +Y+AL
Sbjct: 66 PPDQDHPFGHGKAEVISEAIVGI-ILVIVSVYILIEAI--LSFVKGPSVPQYSAL 117
>sp|P21559|P34_RICRS Protein p34 OS=Rickettsia rickettsii (strain Sheila Smith) GN=p34
PE=3 SV=1
Length = 301
Score = 38.5 bits (88), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 137 SQRAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPD 196
S +VTTAL ++ S+K W+ T S +LA ++ S+ D + + L + + PD
Sbjct: 14 SYLSVTTAL----IILSIKLYAWVVTDSQSILAALIDSMLDITSSFINLIALRFALQPPD 69
Query: 197 ALHPYGYSK 205
H +GY K
Sbjct: 70 HHHRFGYEK 78
>sp|Q9ZCC5|P34_RICPR Protein p34 OS=Rickettsia prowazekii (strain Madrid E) GN=p34 PE=3
SV=1
Length = 300
Score = 36.6 bits (83), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
Query: 137 SQRAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPD 196
S +VTTAL ++ +K W+ TSS +LA ++ S+ D + + L + + PD
Sbjct: 13 SYLSVTTAL----IILIIKLYAWVVTSSQSILASLIDSMLDITSSFINLVALRFALQPPD 68
Query: 197 ALHPYGYSKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAALVICGSFII 256
H +G+ K + + ++ S F + ++ L+ PEN+ +++ +
Sbjct: 69 HYHRFGHEKMQDL-TIFSQSIFFFASAFFVGFASVKSLFIKTKPENISDGTIIMYLCMFL 127
Query: 257 EGASLLVAIQAVKKGAA 273
+L +KK +
Sbjct: 128 TIILVLYQTYVIKKTGS 144
>sp|Q57891|Y449_METJA Uncharacterized transporter MJ0449 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0449 PE=3 SV=1
Length = 283
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 45/82 (54%)
Query: 138 QRAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDA 197
++ + ++ GN L+ +K + SS ++++ +HS++D ++ G+ + + PD
Sbjct: 5 EKPLILSIVGNILLGLIKIIIGYVYSSISLISDGIHSLSDVITSIIGIIGVKIASKPPDE 64
Query: 198 LHPYGYSKERFVWSLISAVGIF 219
HPYG+S+ ++S + +F
Sbjct: 65 SHPYGHSRFECLFSFFIGLALF 86
>sp|Q03218|MMT1_YEAST Mitochondrial metal transporter 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MMT1 PE=1 SV=1
Length = 510
Score = 35.4 bits (80), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 164 SHVMLAEVVHSVADFANQVL--LAYGLSSSRRAPDALHPYGYSKERFVWSL 212
S + A+ +H+++D + +L L+ GL++++ P A +PYGY K V SL
Sbjct: 187 SQALFADAIHAISDMVSDLLTLLSVGLAANK--PTADYPYGYGKIETVGSL 235
>sp|P74068|Y1263_SYNY3 Uncharacterized transporter sll1263 OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=sll1263 PE=3 SV=1
Length = 310
Score = 35.4 bits (80), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 154 LKFGVWLGTSSHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDALHPYGYSKERFVWSLI 213
LK G + T S +L++ + S + A+ ++ + LS + D+ HP+G+SK + S +
Sbjct: 23 LKLGAYAITGSVGLLSDALESTVNLASAIVAFWALSLAATPADSEHPFGHSKAEYFSSGL 82
Query: 214 SAVGIF--CLGSGATIVN 229
IF LG G + V
Sbjct: 83 EGAFIFVAALGIGYSAVE 100
>sp|Q7N2K3|MEND_PHOLL 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate
synthase OS=Photorhabdus luminescens subsp. laumondii
(strain TT01) GN=menD PE=3 SV=1
Length = 564
Score = 35.4 bits (80), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 57 NPSSPFN-VFINDNNGKFFSILEHTNQFRGFCSVHCSKRFVLLGLVSFDNSGSNQHHKYS 115
+PS+P + +N+N G+ FS+L + R + + + V+FD++ + KY+
Sbjct: 465 HPSAPMVLIVVNNNGGQIFSLLPTQEEAR-------QRFYCMPQYVNFDHAAAMFGLKYA 517
Query: 116 SNRNFFTRAKQVKKIETTDE 135
S +N+ + +K+ +E
Sbjct: 518 SPQNWMELQQSIKQAWQQNE 537
>sp|P46348|YEAB_BACSU Uncharacterized transporter YeaB OS=Bacillus subtilis (strain 168)
GN=yeaB PE=3 SV=2
Length = 290
Score = 35.0 bits (79), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 164 SHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDALHPYGYSKERFVWSLISAVGIFCLG 222
S + A+ +++ D V + GL S++ PD HPYG+ + + SLI++ + +G
Sbjct: 37 SEALTADGLNNTTDIIASVAVLIGLRISQKPPDEDHPYGHFRAETIASLIASFIMMVVG 95
>sp|P32798|COT1_YEAST Cobalt uptake protein COT1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=COT1 PE=1 SV=2
Length = 439
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 149 FLVFSLKFGVWLGTS--SH--VMLAEVVHSVADFANQVLLAYGLSSSR-RAPDALHPYGY 203
L+ ++ FG+ + T SH ++A+ H + D + V+ + ++ ++ R PD+ + YG+
Sbjct: 14 LLLDTVFFGIEITTGYLSHSLALIADSFHMLNDIISLVVALWAVNVAKNRNPDSTYTYGW 73
Query: 204 SKERFVWSLISAVGIFCLGSGATIVNGIQHLWTAEAPENMKYAALV 249
+ + +LI+AV + L + ++ +Q + EN K+ V
Sbjct: 74 KRAEILGALINAVFLIAL-CVSILIEALQRIIAPPVIENPKFVLYV 118
>sp|Q66D85|ZITB_YERPS Zinc transporter ZitB OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=zitB PE=3 SV=1
Length = 312
Score = 32.7 bits (73), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 127 VKKIETTDEHSQRAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAY 186
V I + D +S+R + + + G WL + S +LA+ H + D A +
Sbjct: 3 VSAIFSQDSNSKRLLIAFAITTLFMVTEAIGGWL-SGSLALLADTGHMLTDSAALFIALM 61
Query: 187 GLSSSRRAPDALHPYGYSKERFVWSLISAVGIFCL 221
+ S+R PD H +GY + + + ++A + +
Sbjct: 62 AVHFSQRKPDPRHTFGYLRLTTLAAFVNAAALLLI 96
>sp|Q8ZGY6|ZITB_YERPE Zinc transporter ZitB OS=Yersinia pestis GN=zitB PE=3 SV=1
Length = 312
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
Query: 127 VKKIETTDEHSQRAVTTALWGNFLVFSLKFGVWLGTSSHVMLAEVVHSVADFANQVLLAY 186
V I + D +S+R + + + G WL + S +LA+ H + D A +
Sbjct: 3 VSTIFSQDSNSKRLLIAFAITTLFMVTEAIGGWL-SGSLALLADAGHMLTDSAALFIALM 61
Query: 187 GLSSSRRAPDALHPYGYSKERFVWSLISAVGIFCL 221
+ S+R PD H +GY + + + ++A + +
Sbjct: 62 AVHFSQRKPDPRHTFGYLRLTTLAAFVNAAALLLI 96
>sp|P96610|YDBO_BACSU Uncharacterized transporter YdbO OS=Bacillus subtilis (strain 168)
GN=ydbO PE=3 SV=1
Length = 290
Score = 32.3 bits (72), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%)
Query: 164 SHVMLAEVVHSVADFANQVLLAYGLSSSRRAPDALHPYGYSKERFVWSLISAVGIFCLG 222
S + A+ +++ D V + GL S+R D+ HPYG+ + + SL+++ + +G
Sbjct: 37 SEALRADGLNNGTDIVASVAVLIGLRISQRPADSDHPYGHYRAETISSLVASFIMMAVG 95
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,142,328
Number of Sequences: 539616
Number of extensions: 5095261
Number of successful extensions: 13510
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 13489
Number of HSP's gapped (non-prelim): 30
length of query: 365
length of database: 191,569,459
effective HSP length: 119
effective length of query: 246
effective length of database: 127,355,155
effective search space: 31329368130
effective search space used: 31329368130
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)