BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017842
(365 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224119514|ref|XP_002318093.1| predicted protein [Populus trichocarpa]
gi|222858766|gb|EEE96313.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 224/365 (61%), Positives = 256/365 (70%), Gaps = 41/365 (11%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIFARNPYFSIHP-RPRPIKLHLSDS-SLSSKGFS 58
MS+++A KPL + T L S PS FA P P RP KL LS S SLS
Sbjct: 1 MSAASAFTFKPL--LMAETCLCSLPSTFASKPPLKSLPISQRPSKLQLSYSHSLSP---- 54
Query: 59 FKLKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEG 118
F LK TH S FV QTSDWA Q E+ DNTTITL + ++E E NW N+ +++ EG
Sbjct: 55 FSLKPKTHLSLTIPFVTQTSDWAQQGEE-DNTTITLTESEQEEQGES-NWVNEESNDFEG 112
Query: 119 NLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAM 178
+ +W E EGED R E + EE FVEPPE+AK+FVGNLPYDVDSEKLAM
Sbjct: 113 KVPEW-EAEGEDAAATEAIRGEGESGD----EEGFVEPPEEAKIFVGNLPYDVDSEKLAM 167
Query: 179 LFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVE 238
LFE+AGTVEIAEV IYNRETD SRGFGFVTMSTVE
Sbjct: 168 LFEQAGTVEIAEV--------------------------IYNRETDTSRGFGFVTMSTVE 201
Query: 239 EAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 298
E+EKAVEM HRYD+DGR LTVNKAAPRG++PER PRV EPG+RIYVGNLPW+VD+ RLEQ
Sbjct: 202 ESEKAVEMLHRYDLDGRFLTVNKAAPRGSRPERPPRVSEPGYRIYVGNLPWDVDSGRLEQ 261
Query: 299 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 358
+FSEHGKVV+ARVV+DRET RSRGFGFVTMS+E+ELNDAIAALDGQNLDGR IRVNVAE+
Sbjct: 262 IFSEHGKVVSARVVFDRETNRSRGFGFVTMSTESELNDAIAALDGQNLDGRPIRVNVAEE 321
Query: 359 RQRRS 363
R RR+
Sbjct: 322 RPRRT 326
>gi|225456840|ref|XP_002278832.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
Length = 327
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 223/367 (60%), Positives = 255/367 (69%), Gaps = 42/367 (11%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIFARNPYFSIHPRP--RPIKLHLSDSSLSSKGFS 58
MSS+T +LKP S + S +S P+IF+ S P P +PIKL LS S S S
Sbjct: 1 MSSATHHLLKPFS--IPNGSPISLPTIFSTKTPHSYLPIPPHKPIKLLLSCSQSSLFSPS 58
Query: 59 FKLKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEG 118
LK T SS TFVAQTSDWA QEED T+ +E+EQEE WEN+ + +
Sbjct: 59 LFLKSKTLSSSVVTFVAQTSDWAQQEEDN---TVIIEEEQEEKV----TWENEEVEGPDA 111
Query: 119 NLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAM 178
SDW E EGE V EA + E+ + EPPE+AK+FVGNLPYDVDSE+LA
Sbjct: 112 QASDW-ESEGEGAVTEAISDDGVVDDG----EDSYSEPPEEAKVFVGNLPYDVDSERLAR 166
Query: 179 LFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVE 238
LFE+AG VEIAEV IYNRETDRSRGFGFV+MSTVE
Sbjct: 167 LFEQAGVVEIAEV--------------------------IYNRETDRSRGFGFVSMSTVE 200
Query: 239 EAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 298
EAEKAV+MFHRY++DGRLLTVNKAAPRG+QPER PRVFEP FR+YVGNLPW+VD+ARLEQ
Sbjct: 201 EAEKAVDMFHRYELDGRLLTVNKAAPRGSQPERPPRVFEPAFRMYVGNLPWDVDSARLEQ 260
Query: 299 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 358
VFSEHGKVV ARVV+DRETGRSRGFGFVTMSS+TEL DAIAA DGQ LDGR IRVNVAE+
Sbjct: 261 VFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDGQTLDGRTIRVNVAEE 320
Query: 359 RQRRSSF 365
R RRS+F
Sbjct: 321 RPRRSAF 327
>gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223550401|gb|EEF51888.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 319
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 228/359 (63%), Positives = 262/359 (72%), Gaps = 44/359 (12%)
Query: 7 SVLKPLSSMADSTSLLSPPSIF-ARNPYFSIH-PRPRPIKLHLSDSSLSSKGFSFKLKKT 64
+ KPLS MADS LLS PSIF ++ PY S+ P PIKLH++ S S LK
Sbjct: 2 TTFKPLS-MADSC-LLSLPSIFTSKPPYLSLSVPSRPPIKLHITQSYSS-------LKSK 52
Query: 65 THFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWG 124
THFSS VAQTSDWA QEE+ + T+TL + ++E E + ETE +SDW
Sbjct: 53 THFSSLVPLVAQTSDWAQQEEN--DATVTLAESEQEQEWEG----QESETETEARVSDW- 105
Query: 125 EPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAG 184
+ EGE V+ +EE EG EE F EPPEDAK+FVGNLPYDVDS+KLAMLFE+AG
Sbjct: 106 DSEGESAAVDGQGEEEEEVFEGSEPEEAFEEPPEDAKIFVGNLPYDVDSQKLAMLFEQAG 165
Query: 185 TVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAV 244
TVEIAEV IYNRETD SRGFGFV+MSTVEEAEKAV
Sbjct: 166 TVEIAEV--------------------------IYNRETDTSRGFGFVSMSTVEEAEKAV 199
Query: 245 EMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 304
EMFHR+D+DGRLLTVNKAAPRG++PER PRVFEPG+RIYVGNLPW+VDNARLEQ+FSEHG
Sbjct: 200 EMFHRHDLDGRLLTVNKAAPRGSRPERPPRVFEPGYRIYVGNLPWDVDNARLEQIFSEHG 259
Query: 305 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 363
KVV+ARVVYDR+TGRSRGFGFVTMS+ETELNDAIAALDG++LDGRAIRVNVAE R RR+
Sbjct: 260 KVVDARVVYDRDTGRSRGFGFVTMSTETELNDAIAALDGRSLDGRAIRVNVAEQRPRRN 318
>gi|297733663|emb|CBI14910.3| unnamed protein product [Vitis vinifera]
Length = 306
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 216/367 (58%), Positives = 247/367 (67%), Gaps = 63/367 (17%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIFARNPYFSIHPRP--RPIKLHLSDSSLSSKGFS 58
MSS+T +LKP S + S +S P+IF+ S P P +PIKL LS S S S
Sbjct: 1 MSSATHHLLKPFS--IPNGSPISLPTIFSTKTPHSYLPIPPHKPIKLLLSCSQSSLFSPS 58
Query: 59 FKLKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEG 118
LK T SS TFVAQTSDWA QEED T+ +E+EQEE WEN+ A +G
Sbjct: 59 LFLKSKTLSSSVVTFVAQTSDWAQQEEDN---TVIIEEEQEEKV----TWENEEAISDDG 111
Query: 119 NLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAM 178
+ D E+ + EPPE+AK+FVGNLPYDVDSE+LA
Sbjct: 112 VVDD--------------------------GEDSYSEPPEEAKVFVGNLPYDVDSERLAR 145
Query: 179 LFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVE 238
LFE+AG VEIAE VIYNRETDRSRGFGFV+MSTVE
Sbjct: 146 LFEQAGVVEIAE--------------------------VIYNRETDRSRGFGFVSMSTVE 179
Query: 239 EAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 298
EAEKAV+MFHRY++DGRLLTVNKAAPRG+QPER PRVFEP FR+YVGNLPW+VD+ARLEQ
Sbjct: 180 EAEKAVDMFHRYELDGRLLTVNKAAPRGSQPERPPRVFEPAFRMYVGNLPWDVDSARLEQ 239
Query: 299 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 358
VFSEHGKVV ARVV+DRETGRSRGFGFVTMSS+TEL DAIAA DGQ LDGR IRVNVAE+
Sbjct: 240 VFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDGQTLDGRTIRVNVAEE 299
Query: 359 RQRRSSF 365
R RRS+F
Sbjct: 300 RPRRSAF 306
>gi|147838354|emb|CAN61133.1| hypothetical protein VITISV_039575 [Vitis vinifera]
Length = 1122
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 193/300 (64%), Positives = 222/300 (74%), Gaps = 38/300 (12%)
Query: 66 HFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGE 125
+++ TFVAQTSDWA QEED T+ +E+EQEE + WEN+ + + SDW E
Sbjct: 861 QYNAEVTFVAQTSDWAQQEEDN---TVIIEEEQEE----KVTWENEEVEGPDAQASDW-E 912
Query: 126 PEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGT 185
EGE V EA + E+ + EPPE+AK+FVGNLPYDVDSE+LA LFE+AG
Sbjct: 913 SEGEGAVTEAISDDGVVDDG----EDSYSEPPEEAKVFVGNLPYDVDSERLARLFEQAGV 968
Query: 186 VEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVE 245
VEIAEV IYNRETDRSRGFGFV+MSTVEEAEKAV+
Sbjct: 969 VEIAEV--------------------------IYNRETDRSRGFGFVSMSTVEEAEKAVD 1002
Query: 246 MFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 305
MFHRY++DGRLLTVNKAAPRG+QPER PRVFEP FR+YVGNLPW+VD+ARLEQVFSEHGK
Sbjct: 1003 MFHRYELDGRLLTVNKAAPRGSQPERPPRVFEPAFRMYVGNLPWDVDSARLEQVFSEHGK 1062
Query: 306 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
VV ARVV+DRETGRSRGFGFVTMSS+TEL DAIAA DGQ LDGR IRVNVAE+R RRS+F
Sbjct: 1063 VVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDGQTLDGRTIRVNVAEERPRRSAF 1122
>gi|224133740|ref|XP_002321649.1| predicted protein [Populus trichocarpa]
gi|222868645|gb|EEF05776.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 209/351 (59%), Positives = 240/351 (68%), Gaps = 63/351 (17%)
Query: 19 TSLLSPPSIFARNPYFSIHPRP---RPIKLHLSDS-SLSSKGFSFKLKKTTHFSSFTTFV 74
T + S PSIF P + P P RPIKL LS S SLS+ +K TH S FV
Sbjct: 4 TCICSFPSIFTSKP--PLKPLPISHRPIKLQLSYSHSLST----LSVKPKTHLSLTIPFV 57
Query: 75 AQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGEDTVVE 134
AQTSDWA QEE+ +NTTITL + +SDW E EGED
Sbjct: 58 AQTSDWAQQEEE-NNTTITLTE-----------------------VSDW-EAEGEDAA-- 90
Query: 135 AGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFH 194
A E + GE +EE FVEPPE+AK++VGNLPYDV SEKLAMLF++AGTVEI+EV
Sbjct: 91 ASETEAVRGEGERGDEEGFVEPPEEAKIYVGNLPYDVTSEKLAMLFDQAGTVEISEV--- 147
Query: 195 FLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDG 254
IYN ETD SRGFGFVTMSTVEE++KA+EMF+RY++DG
Sbjct: 148 -----------------------IYNTETDTSRGFGFVTMSTVEESDKAIEMFNRYNLDG 184
Query: 255 RLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYD 314
RLLTVNKAAPRG++PER PRV EP +RIYVGNLPW VD+ RLE+VFSEHGKVV+A+VV D
Sbjct: 185 RLLTVNKAAPRGSRPERPPRVSEPSYRIYVGNLPWGVDSGRLEEVFSEHGKVVSAQVVSD 244
Query: 315 RETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
ETGRSRGFGFVTMSSE+ELNDAIAALDGQ LDGRAIRVNVA +R RRSSF
Sbjct: 245 WETGRSRGFGFVTMSSESELNDAIAALDGQELDGRAIRVNVAAERPRRSSF 295
>gi|449440612|ref|XP_004138078.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 330
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 217/368 (58%), Positives = 253/368 (68%), Gaps = 47/368 (12%)
Query: 2 SSSTASVLKPLSSMADSTSLLSPPSIFARNPYFSIHPRP-RPIKLHLSDSSLSSKGFSFK 60
SSS S+ KPLS + LS PS+F P + P + I HLS SS S G
Sbjct: 3 SSSATSLFKPLSK--PDSCFLSLPSLFTGRPPHTFLSFPSKFIPFHLSSSSSYSSG-FSP 59
Query: 61 LKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEE--PNWENQGADETEG 118
KK H S VAQTSDWA ++ D TI + + +ENG EE P+WEN+ ETE
Sbjct: 60 SKKKPHLPS----VAQTSDWAQED---DTITIDPKLDNDENGGEEGGPHWENEELSETES 112
Query: 119 NLSDW---GEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEK 175
+SDW GE G + V E ++E GE+G +E EP EDAKLFVGNLPYD+DSEK
Sbjct: 113 RISDWEGEGEDGGSEAEVGGDEEEDEEGEQGPYE-----EPNEDAKLFVGNLPYDIDSEK 167
Query: 176 LAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMS 235
LAMLFEKAGTVEIAE VIYNRETDRSRGFGFVTMS
Sbjct: 168 LAMLFEKAGTVEIAE--------------------------VIYNRETDRSRGFGFVTMS 201
Query: 236 TVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNAR 295
TVEEAEKAV+ F+RYD+ GRLLTVNKAAPRG++ ER PR F+P FRIYVGNLPW+VDN R
Sbjct: 202 TVEEAEKAVDTFNRYDLSGRLLTVNKAAPRGSRQEREPRPFQPTFRIYVGNLPWDVDNGR 261
Query: 296 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 355
LEQ+FSEHGKVV+ARV+YDR++GRSRGFGFVTM+ ET +NDAIAALDGQ+LDGRAIRVNV
Sbjct: 262 LEQLFSEHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAALDGQSLDGRAIRVNV 321
Query: 356 AEDRQRRS 363
AE+R RR+
Sbjct: 322 AEERPRRN 329
>gi|356508744|ref|XP_003523114.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 305
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 201/348 (57%), Positives = 219/348 (62%), Gaps = 78/348 (22%)
Query: 20 SLLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSFKLKKTTHFSSFTTFVAQTSD 79
SL SPPS +P+ L S + S L H S T VAQTSD
Sbjct: 34 SLFSPPS--------------KPLTLQFS---CINSSVSLSLAARAHRSPLVTRVAQTSD 76
Query: 80 WADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGEDTVVEAGERQ 139
WA QEED T T + E+ QG ET+ LS W EP GED AGE
Sbjct: 77 WAQQEEDD---TATFQDEE------------QGLSETQAGLSSW-EPNGED----AGE-- 114
Query: 140 EESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGN 199
E F EPPE+AKLFVGNLPYDVDS+KLAMLFE+AGTVEIAEV
Sbjct: 115 -----------ESFAEPPEEAKLFVGNLPYDVDSQKLAMLFEQAGTVEIAEV-------- 155
Query: 200 QGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV 259
IYNRETD+SRGFGFVTMSTVEEAE AVE F RYD DGRLLTV
Sbjct: 156 ------------------IYNRETDQSRGFGFVTMSTVEEAENAVEKFSRYDFDGRLLTV 197
Query: 260 NKAAPRGTQPERAP--RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRET 317
NKA+PRGT+PER P FEP IYVGNLPW+VDN RLEQ+FSEHG VVNARVVYDRET
Sbjct: 198 NKASPRGTRPERPPPRHSFEPSLSIYVGNLPWDVDNTRLEQIFSEHGNVVNARVVYDRET 257
Query: 318 GRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
RSRGFGFVTMS ETE+ DA+AALDGQ+LDGR IRV+VAEDR RR SF
Sbjct: 258 RRSRGFGFVTMSDETEMKDAVAALDGQSLDGRPIRVSVAEDRPRRGSF 305
>gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
Length = 300
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 205/345 (59%), Positives = 233/345 (67%), Gaps = 50/345 (14%)
Query: 23 SPPSIFARNPYFSIHPRP-RPIKL-HLSDSSLSSKGFSFKLKKTTHFSSFTTFVAQTSDW 80
S P +F+ P P P +PIKL HLS SS S SFK + S TT VAQTSDW
Sbjct: 4 SSPILFSSKPPCPFLPIPSKPIKLIHLSTSSSSWV--SFKKSPSPSSRSLTTLVAQTSDW 61
Query: 81 ADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGEDTVVEAGERQE 140
A QEED + TL + E E GA++ GE G D VE GE
Sbjct: 62 AQQEEDSNVAEATLSDWEGEGEGEGEEQTESGAED--------GEESGGDGFVEGGE--- 110
Query: 141 ESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQ 200
E+ + PPE+AKLFVGNLPYDVD + LA LF++AGTVE+AEV
Sbjct: 111 ---------EDSYPLPPEEAKLFVGNLPYDVDHQALAELFDQAGTVEVAEV--------- 152
Query: 201 GFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN 260
IYNRETD+SRGFGFVTMSTVEEAEKAVEMF+RYDI+GRLLTVN
Sbjct: 153 -----------------IYNRETDQSRGFGFVTMSTVEEAEKAVEMFNRYDINGRLLTVN 195
Query: 261 KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRS 320
KAAPRG + +R PR FEP FR+YVGNLPW+VD+ARLEQVFSEHGKVV ARVVYDRETGRS
Sbjct: 196 KAAPRGARVDRPPRAFEPAFRMYVGNLPWQVDDARLEQVFSEHGKVVEARVVYDRETGRS 255
Query: 321 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
RGFGFVTMS++TEL+DAIAALDGQ+LDGRAIRVNVAEDR RR+SF
Sbjct: 256 RGFGFVTMSTQTELDDAIAALDGQSLDGRAIRVNVAEDRPRRASF 300
>gi|225452270|ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 312
Score = 340 bits (871), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 207/369 (56%), Positives = 251/369 (68%), Gaps = 61/369 (16%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIFA-RNPYFSIHPRPRPIKL-HLSDSSLSSKGFS 58
M+SS A +LKP S MA+S P ++F + P+ + P+P++L HLS S SS
Sbjct: 1 MASSNA-LLKPFS-MAESCLTSVPTTLFTTKTPHPLLSLPPKPVRLFHLSCSCSSSW--- 55
Query: 59 FKLKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEG 118
LK T ++ FVAQTSDWA QEE+++ +T W+++G +E E
Sbjct: 56 VSLKTKTSPTTLVPFVAQTSDWAQQEEEEEKGGLT--------------WDSEGGEEIEA 101
Query: 119 NLSD--WGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKL 176
+ S+ W E GEE E+ + EPPE+AKLFVGNLPYD+DSEKL
Sbjct: 102 SGSEEAWEG------------EVGEDGEESEGSEDTYSEPPEEAKLFVGNLPYDIDSEKL 149
Query: 177 AMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMST 236
A LF++AG VEIAEV IYNRETD+SRGFGF+TMST
Sbjct: 150 AQLFDEAGVVEIAEV--------------------------IYNRETDQSRGFGFITMST 183
Query: 237 VEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARL 296
VEEAEKAVEMF+RYD++GR LTVNKAAPRG++PER P+ FEP FRIYVGNLPW+VD+ARL
Sbjct: 184 VEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDDARL 243
Query: 297 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
EQVFSEHGKVV+ARVVYDR+T RSRGFGFVTMSSETELNDAIAALDGQ+LDGRAIRVNVA
Sbjct: 244 EQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLDGRAIRVNVA 303
Query: 357 EDRQRRSSF 365
E+R RR S+
Sbjct: 304 EERPRRGSY 312
>gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum crystallinum]
Length = 289
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 194/352 (55%), Positives = 239/352 (67%), Gaps = 64/352 (18%)
Query: 12 LSSMADSTSLLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSFKLKKTTHFSSFT 71
+S+ ++SL SP + ++ +FSI +P K+ LS S S + SF L+K T S+
Sbjct: 1 MSNTCFTSSLHSPSILIPKSLFFSIPSKP--TKIPLSLSLSSPQLSSFSLQKQTLSSTVV 58
Query: 72 TFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGEDT 131
T+VAQTS+W D++ T LE E ++EP+W N TE +SD+G EGE
Sbjct: 59 TYVAQTSEW-----DQEGTNAVLE----EGSDQEPSWGN-----TEAQVSDFGSDEGEG- 103
Query: 132 VVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEV 191
F EPPEDAKLFVGNLP+DVDSEKLA +FE AG VEIAEV
Sbjct: 104 ---------------------FQEPPEDAKLFVGNLPFDVDSEKLAQIFEGAGVVEIAEV 142
Query: 192 KFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYD 251
IYNRETDRSRGFGFVTMSTVEEAEKAVE++H+++
Sbjct: 143 --------------------------IYNRETDRSRGFGFVTMSTVEEAEKAVELYHKFE 176
Query: 252 IDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARV 311
++GR LTVNKAAPRG++PERAPR +EP FR+YVGNLPW+VD+ARLEQVFSEHGKV++ARV
Sbjct: 177 VNGRFLTVNKAAPRGSRPERAPREYEPSFRVYVGNLPWDVDDARLEQVFSEHGKVLSARV 236
Query: 312 VYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 363
V DRETGRSRGF FVTM+SE+E+N+AI ALDGQ L+GRAIRVNVAE+R RRS
Sbjct: 237 VSDRETGRSRGFAFVTMASESEMNEAIGALDGQTLEGRAIRVNVAEERPRRS 288
>gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
gi|297313481|gb|EFH43904.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
Length = 305
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 208/370 (56%), Positives = 240/370 (64%), Gaps = 78/370 (21%)
Query: 2 SSSTASVLKPLSSMADSTS--LLSPPSIFARNPYF-----SIHPRPRPIKLHLSDSSLSS 54
SS S LKPL+ MADS+S + S PSI + ++ I L LS S S
Sbjct: 3 SSIVTSSLKPLA-MADSSSSTIFSHPSISSTISSSRIRCSNVSLLTGHINLPLSFSRFSR 61
Query: 55 KGFSFKLKKTTHF--SSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQG 112
FS LK TH S F +FVAQTSDWA E+ ++ +E E E ++E+Q
Sbjct: 62 --FSLSLKSKTHLKKSPFVSFVAQTSDWA---EEGGEGSVAVE-------ENEDSFESQD 109
Query: 113 ADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVD 172
A EG++S E EF EP E+AKLFVGNL YDVD
Sbjct: 110 A---EGDVS---------------------------EGAEFPEPSEEAKLFVGNLAYDVD 139
Query: 173 SEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFV 232
S+ LAMLFE+AGTVEIAE VIYNRETD+SRGFGFV
Sbjct: 140 SQALAMLFEQAGTVEIAE--------------------------VIYNRETDQSRGFGFV 173
Query: 233 TMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVD 292
TMSTVEEAE AVE F+RYD++GRLLTVNKAAPRG++PERAPRV+EP FR+YVGNLPW+VD
Sbjct: 174 TMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVD 233
Query: 293 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 352
N RLEQVFSEHGKVV ARVVYDRETGRSRGFGFVTMS+E ELNDAIAALDGQN++GRAIR
Sbjct: 234 NGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNENELNDAIAALDGQNMEGRAIR 293
Query: 353 VNVAEDRQRR 362
VNVAE+R RR
Sbjct: 294 VNVAEERPRR 303
>gi|449501439|ref|XP_004161367.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like, partial
[Cucumis sativus]
Length = 324
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 204/362 (56%), Positives = 236/362 (65%), Gaps = 61/362 (16%)
Query: 20 SLLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSFKL-------------KKTTH 66
S L P I A FS++ P H+ SSL K F L KK H
Sbjct: 5 SSLYPSRILA----FSLYLLYSPADPHIL-SSLPFKFIPFHLSSSSSYSSGFSPSKKKPH 59
Query: 67 FSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEE--PNWENQGADETEGNLSDWG 124
S VAQTSDWA ++ D TI + + +ENG EE P+WEN+ ETE +SDW
Sbjct: 60 LPS----VAQTSDWAQED---DTITIDPKLDNDENGGEEGGPHWENEELSETESRISDWE 112
Query: 125 EPEGEDTVVEAGERQEESGE---EGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFE 181
+ EE E +G +EE P EDAKLFVGNLPYD+DSEKLAMLFE
Sbjct: 113 GEGEDGGSEAEVGGDEEEDEEGEQGPYEE-----PNEDAKLFVGNLPYDIDSEKLAMLFE 167
Query: 182 KAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAE 241
KAGTVEIAEV IYNRETDRSRGFGFVTMSTVEEAE
Sbjct: 168 KAGTVEIAEV--------------------------IYNRETDRSRGFGFVTMSTVEEAE 201
Query: 242 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 301
KAV+ F+RYD+ GRLLTVNKAAPRG++ ER PR F+P FRIYVGNLPW+VDN RLEQ+FS
Sbjct: 202 KAVDTFNRYDLSGRLLTVNKAAPRGSRQEREPRPFQPTFRIYVGNLPWDVDNGRLEQLFS 261
Query: 302 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
EHGKVV+ARV+YDR++GRSRGFGFVTM+ ET +NDAIAALDGQ+LDGRAIRVNVAE+R R
Sbjct: 262 EHGKVVDARVLYDRDSGRSRGFGFVTMADETGMNDAIAALDGQSLDGRAIRVNVAEERPR 321
Query: 362 RS 363
R+
Sbjct: 322 RN 323
>gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabidopsis thaliana]
gi|23505889|gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana]
Length = 329
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 204/368 (55%), Positives = 244/368 (66%), Gaps = 45/368 (12%)
Query: 2 SSSTASVLKPLSSMADSTS--LLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSF 59
SS S LKPL+ MADS+S + S PSI + I + + LS S
Sbjct: 3 SSIVTSSLKPLA-MADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSFSRVSL 61
Query: 60 KLKKTTHF--SSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETE 117
LK TH S F +FVAQTSDWA E+ ++ +E E E + E+Q D +E
Sbjct: 62 SLKTKTHLKKSPFVSFVAQTSDWA---EEGGEGSVAVE-------ETENSLESQ--DVSE 109
Query: 118 GNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLA 177
G+ S+ EG+ V E E + + E V E EF EP E+AKLFVGNL YDV+S+ LA
Sbjct: 110 GDESEGDASEGD--VSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALA 167
Query: 178 MLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTV 237
MLFE+AGTVEIAEV IYNRETD+SRGFGFVTMS+V
Sbjct: 168 MLFEQAGTVEIAEV--------------------------IYNRETDQSRGFGFVTMSSV 201
Query: 238 EEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLE 297
+EAE AVE F+RYD++GRLLTVNKAAPRG++PERAPRV+EP FR+YVGNLPW+VDN RLE
Sbjct: 202 DEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLE 261
Query: 298 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
Q+FSEHGKVV ARVVYDRETGRSRGFGFVTMS ELN+AI+ALDGQNL+GRAIRVNVAE
Sbjct: 262 QLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAE 321
Query: 358 DRQRRSSF 365
+R R +
Sbjct: 322 ERPPRHGY 329
>gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thaliana]
gi|464662|sp|Q04836.1|ROC3_ARATH RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein 1/2/3; Short=AtRBP33; AltName:
Full=RNA-binding protein RNP-T; AltName:
Full=RNA-binding protein cp31; Flags: Precursor
gi|16490|emb|CAA46347.1| RNA-binding protein [Arabidopsis thaliana]
gi|387569|gb|AAA32860.1| 31 kDa RNA binding protein [Arabidopsis thaliana]
gi|475718|gb|AAA18378.1| RNA-binding protein 1 [Arabidopsis thaliana]
gi|4220513|emb|CAA22986.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
gi|7269328|emb|CAB79387.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
gi|332659554|gb|AEE84954.1| ribonucleoprotein [Arabidopsis thaliana]
gi|737169|prf||1921382A RNA-binding protein
Length = 329
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 204/368 (55%), Positives = 244/368 (66%), Gaps = 45/368 (12%)
Query: 2 SSSTASVLKPLSSMADSTS--LLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSF 59
SS S LKPL+ MADS+S + S PSI + I + + LS S
Sbjct: 3 SSIVTSSLKPLA-MADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSFSRVSL 61
Query: 60 KLKKTTHF--SSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETE 117
LK TH S F +FVAQTSDWA E+ ++ +E E E + E+Q D +E
Sbjct: 62 SLKTKTHLKKSPFVSFVAQTSDWA---EEGGEGSVAVE-------ETENSLESQ--DVSE 109
Query: 118 GNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLA 177
G+ S+ EG+ V E E + + E V E EF EP E+AKLFVGNL YDV+S+ LA
Sbjct: 110 GDESEGDASEGD--VSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALA 167
Query: 178 MLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTV 237
MLFE+AGTVEIAEV IYNRETD+SRGFGFVTMS+V
Sbjct: 168 MLFEQAGTVEIAEV--------------------------IYNRETDQSRGFGFVTMSSV 201
Query: 238 EEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLE 297
+EAE AVE F+RYD++GRLLTVNKAAPRG++PERAPRV+EP FR+YVGNLPW+VDN RLE
Sbjct: 202 DEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLE 261
Query: 298 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
Q+FSEHGKVV ARVVYDRETGRSRGFGFVTMS ELN+AI+ALDGQNL+GRAIRVNVAE
Sbjct: 262 QLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAE 321
Query: 358 DRQRRSSF 365
+R R +
Sbjct: 322 ERPPRRGY 329
>gi|168274276|dbj|BAG09558.1| chloroplast RNA binding protein [Mesembryanthemum crystallinum]
Length = 306
Score = 337 bits (864), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 202/366 (55%), Positives = 246/366 (67%), Gaps = 64/366 (17%)
Query: 1 MSSSTAS-VLKPLSSMADS-TSLLSPPSIF-ARNPYFSIHPRPRPIKLHLSDSSLSSKGF 57
MSS+TA+ LK LS + T+ L PSIF ++ FSI +P KL+LS S S
Sbjct: 1 MSSATANPCLKTLSLSHNCFTTSLYTPSIFNPKSHNFSIPLKP--TKLNLSISVFSP--- 55
Query: 58 SFKLKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETE 117
F +K+ S+ ++VAQTSDW D++++ L+ EQ+ G W Q ++E
Sbjct: 56 -FSPQKS---STIVSYVAQTSDW-----DQESSNALLDDEQQVGGA---TWGTQNFGDSE 103
Query: 118 GNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLA 177
+S G E +EES E+ F EPPE+AKLFVGNLPYDVDSE+LA
Sbjct: 104 PQVSGVG-----------NEDEEES-------EQGFSEPPEEAKLFVGNLPYDVDSERLA 145
Query: 178 MLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTV 237
+F+ AG VEIAEV IYNRETDRSRGFGFVTMSTV
Sbjct: 146 QIFDGAGVVEIAEV--------------------------IYNRETDRSRGFGFVTMSTV 179
Query: 238 EEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLE 297
EEAEKAVEM + +D++GRLLTVNKAAPRG++PER PR FEP R+YVGNLPW+VDNARLE
Sbjct: 180 EEAEKAVEMLNGFDMNGRLLTVNKAAPRGSRPERPPREFEPSCRVYVGNLPWDVDNARLE 239
Query: 298 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
QVFSEHGKV++ARVV DRETGRSRGFGFV+M+SE+E+NDAIAALDGQ LDGRAIRVNVAE
Sbjct: 240 QVFSEHGKVLSARVVSDRETGRSRGFGFVSMASESEMNDAIAALDGQTLDGRAIRVNVAE 299
Query: 358 DRQRRS 363
+R RR+
Sbjct: 300 ERPRRA 305
>gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thaliana]
Length = 315
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 187/316 (59%), Positives = 221/316 (69%), Gaps = 42/316 (13%)
Query: 52 LSSKGFSFKLKKTTHF--SSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWE 109
LS S LK TH S F +FVAQTSDWA E+ ++ +E E E + E
Sbjct: 40 LSFSRVSLSLKTKTHLKKSPFVSFVAQTSDWA---EEGGEGSVAVE-------ETENSLE 89
Query: 110 NQGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPY 169
+Q D +EG+ S+ EG+ V E E + + E V E EF EP E+AKLFVGNL Y
Sbjct: 90 SQ--DVSEGDESEGDASEGD--VSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAY 145
Query: 170 DVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGF 229
DV+S+ LAMLFE+AGTVEIAEV IYNRETD+SRGF
Sbjct: 146 DVNSQALAMLFEQAGTVEIAEV--------------------------IYNRETDQSRGF 179
Query: 230 GFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPW 289
GFVTMS+V+EAE AVE F+RYD++GRLLTVNKAAPRG++PERAPRV+EP FR+YVGNLPW
Sbjct: 180 GFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPW 239
Query: 290 EVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGR 349
+VDN RLEQ+FSEHGKVV ARVVYDRETGRSRGFGFVTMS ELN+AI+ALDGQNL+GR
Sbjct: 240 DVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGR 299
Query: 350 AIRVNVAEDRQRRSSF 365
AIRVNVAE+R R +
Sbjct: 300 AIRVNVAEERPPRRGY 315
>gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 314
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 202/368 (54%), Positives = 236/368 (64%), Gaps = 60/368 (16%)
Query: 2 SSSTASVLKPLSSMADSTS--LLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSF 59
SS S LKPL+ MADS+S + S PSI + I + + LS S
Sbjct: 3 SSIVTSSLKPLA-MADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSFSRVSL 61
Query: 60 KLKKTTHF--SSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETE 117
LK TH S F +FVAQTSDWA EE GE + +ETE
Sbjct: 62 SLKTKTHLKKSPFVSFVAQTSDWA-----------------EEGGEG-----SVAVEETE 99
Query: 118 GNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLA 177
+L E +D V E E + + E V E EF EP E+AKLFVGNL YDV+S+ LA
Sbjct: 100 NSL------ESQD-VSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALA 152
Query: 178 MLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTV 237
MLFE+AGTVEIAEV IYNRETD+SRGFGFVTMS+V
Sbjct: 153 MLFEQAGTVEIAEV--------------------------IYNRETDQSRGFGFVTMSSV 186
Query: 238 EEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLE 297
+EAE AVE F+RYD++GRLLTVNKAAPRG++PERAPRV+EP FR+YVGNLPW+VDN RLE
Sbjct: 187 DEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLE 246
Query: 298 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
Q+FSEHGKVV ARVVYDRETGRSRGFGFVTMS ELN+AI+ALDGQNL+GRAIRVNVAE
Sbjct: 247 QLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAE 306
Query: 358 DRQRRSSF 365
+R R +
Sbjct: 307 ERPPRRGY 314
>gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thaliana]
Length = 310
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 190/338 (56%), Positives = 228/338 (67%), Gaps = 43/338 (12%)
Query: 30 RNPYFSIHPRPRPIKLHLSDSSLSSKGFSFKLKKTTHF--SSFTTFVAQTSDWADQEEDK 87
++P + HP H D SS + K KT H S F +FVAQT DWA E+
Sbjct: 14 KHPSHAKHPDHANDPDHAIDPGHSSHPSNAKHPKT-HLKKSPFVSFVAQTLDWA---EEG 69
Query: 88 DNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGV 147
++ +E E E + E+Q D +EG+ S+ EG+ V E E + + E V
Sbjct: 70 GEGSVAVE-------ETENSLESQ--DVSEGDESEGDASEGD--VSEGDESEGDVSEGAV 118
Query: 148 FEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVC 207
E EF EP E+AKLFVGNL YDV+S+ LAMLFE+AGTVEIAEV
Sbjct: 119 SERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEV---------------- 162
Query: 208 AVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT 267
IYNRETD+SRGFGFVTMS+V+EAE AVE F+RYD++GRLLTVNKAAPRG+
Sbjct: 163 ----------IYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGS 212
Query: 268 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
+PERAPRV+EP FR+YVGNLPW+VDN RLEQ+FSEHGKVV ARVVYDRETGRSRGFGFVT
Sbjct: 213 RPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVT 272
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
MS ELN+AI+ALDGQNL+GRAIRVNVAE+R R +
Sbjct: 273 MSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 310
>gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 304
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 185/316 (58%), Positives = 213/316 (67%), Gaps = 57/316 (18%)
Query: 52 LSSKGFSFKLKKTTHF--SSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWE 109
LS S LK TH S F +FVAQTSDWA EE GE
Sbjct: 44 LSFSRVSLSLKTKTHLKKSPFVSFVAQTSDWA-----------------EEGGEG----- 81
Query: 110 NQGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPY 169
+ +ETE +L E +D V E E + + E V E EF EP E+AKLFVGNL Y
Sbjct: 82 SVAVEETENSL------ESQD-VSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAY 134
Query: 170 DVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGF 229
DV+S+ LAMLFE+AGTVEIAEV IYNRETD+SRGF
Sbjct: 135 DVNSQALAMLFEQAGTVEIAEV--------------------------IYNRETDQSRGF 168
Query: 230 GFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPW 289
GFVTMS+V+EAE AVE F+RYD++GRLLTVNKAAPRG++PERAPRV+EP FR+YVGNLPW
Sbjct: 169 GFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPW 228
Query: 290 EVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGR 349
+VDN RLEQ+FSEHGKVV ARVVYDRETGRSRGFGFVTMS ELN+AI+ALDGQNL+GR
Sbjct: 229 DVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGR 288
Query: 350 AIRVNVAEDRQRRSSF 365
AIRVNVAE+R R +
Sbjct: 289 AIRVNVAEERPPRRGY 304
>gi|296087572|emb|CBI34828.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 320 bits (820), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 158/216 (73%), Positives = 179/216 (82%), Gaps = 26/216 (12%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAV 209
E+ + EPPE+AKLFVGNLPYD+DSEKLA LF++AG VEIAEV
Sbjct: 83 EDTYSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEV------------------ 124
Query: 210 FYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
IYNRETD+SRGFGF+TMSTVEEAEKAVEMF+RYD++GR LTVNKAAPRG++P
Sbjct: 125 --------IYNRETDQSRGFGFITMSTVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRP 176
Query: 270 ERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
ER P+ FEP FRIYVGNLPW+VD+ARLEQVFSEHGKVV+ARVVYDR+T RSRGFGFVTMS
Sbjct: 177 ERPPQAFEPSFRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMS 236
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
SETELNDAIAALDGQ+LDGRAIRVNVAE+R RR S+
Sbjct: 237 SETELNDAIAALDGQSLDGRAIRVNVAEERPRRGSY 272
>gi|358248672|ref|NP_001239665.1| uncharacterized protein LOC100790280 [Glycine max]
gi|255644452|gb|ACU22730.1| unknown [Glycine max]
Length = 290
Score = 320 bits (820), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 196/343 (57%), Positives = 220/343 (64%), Gaps = 81/343 (23%)
Query: 25 PSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSFKLKKTTHFSSFTTFVAQTSDWADQE 84
PS+F P +P+ L S L+S S L TH S TFVAQTSDWA QE
Sbjct: 27 PSLFT--------PPSKPLTLQFS--CLNSS-VSLSLAAPTHRSPLVTFVAQTSDWAQQE 75
Query: 85 EDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGEDTVVEAGERQEESGE 144
E+ Q ETE L W EP GED AG+
Sbjct: 76 EE------------------------QSLAETEAGLESW-EPNGED----AGD------- 99
Query: 145 EGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHM 204
E FVEPPE+AKLFVGNLPYDVDS+KLAMLFE+AGTVEIAEV
Sbjct: 100 ------ESFVEPPEEAKLFVGNLPYDVDSQKLAMLFEQAGTVEIAEV------------- 140
Query: 205 WVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP 264
IYNRETD+SRGFGFVTMSTVEEAE AVE F+RYDIDGRLLTVNKA+P
Sbjct: 141 -------------IYNRETDQSRGFGFVTMSTVEEAESAVEKFNRYDIDGRLLTVNKASP 187
Query: 265 RGTQPERAPRV--FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
RGT+PER P FE IYVGNLPW+VDN RL+Q+FS+HG VVNARVVYDRE+GRSRG
Sbjct: 188 RGTRPERPPPRRSFESSLSIYVGNLPWDVDNTRLKQIFSKHGNVVNARVVYDRESGRSRG 247
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
FGFVTMS ETE+NDA+AALDG++LDGRAI+V+VAEDR RR SF
Sbjct: 248 FGFVTMSDETEMNDAVAALDGESLDGRAIKVSVAEDRPRRGSF 290
>gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
gi|297311615|gb|EFH42039.1| hypothetical protein ARALYDRAFT_918033 [Arabidopsis lyrata subsp.
lyrata]
Length = 291
Score = 320 bits (819), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 189/368 (51%), Positives = 228/368 (61%), Gaps = 85/368 (23%)
Query: 1 MSSSTASVLKPLSSMADSTS--LLSPPSIF---ARNPYFS-IHPRPRPIKLHLSDSSLSS 54
M+SS + L ++A+S+S L PSI + P+ S PRPI L LS
Sbjct: 1 MTSSILTSSLKLLAVANSSSSTLFCLPSISTISSSKPHHSNFSLPPRPINLPLS------ 54
Query: 55 KGFSFKLKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGAD 114
K K + S TFV+QTSDW ++EE +D
Sbjct: 55 ----LKSKTLRNSSPIVTFVSQTSDWPEEEEGED-------------------------- 84
Query: 115 ETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSE 174
G G V+ E+ G+ F EPPE+AKLFVGNLPYDVDS+
Sbjct: 85 ---------GSIGGTSVTVDESFDTEDGGK--------FPEPPEEAKLFVGNLPYDVDSQ 127
Query: 175 KLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTM 234
LAMLFE+AGTVEI+EV IYNR+TD+SRGFGFVTM
Sbjct: 128 ALAMLFEQAGTVEISEV--------------------------IYNRDTDQSRGFGFVTM 161
Query: 235 STVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNA 294
STVEEA+KAVE F+RY+++GRLLTVN AAPRG++PER PR ++ FRIYVGNLPW+VDN
Sbjct: 162 STVEEAKKAVEKFNRYEVNGRLLTVNIAAPRGSRPERQPRQYDAAFRIYVGNLPWDVDND 221
Query: 295 RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 354
RL+QVFSEHGKVV+ARVVYDRETGRSRGFGFVTMS+E E+NDAIAALDGQNL+GRAI+VN
Sbjct: 222 RLQQVFSEHGKVVDARVVYDRETGRSRGFGFVTMSNENEVNDAIAALDGQNLEGRAIKVN 281
Query: 355 VAEDRQRR 362
VAE+R RR
Sbjct: 282 VAEERPRR 289
>gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
gi|9759027|dbj|BAB09396.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|14532488|gb|AAK63972.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|18655365|gb|AAL76138.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gi|332008535|gb|AED95918.1| chloroplast RNA-binding protein 31B [Arabidopsis thaliana]
Length = 289
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 184/371 (49%), Positives = 230/371 (61%), Gaps = 96/371 (25%)
Query: 5 TASVLKP---LSSMADSTS--LLSPPSIF----ARNPYFSIHPRPRPIKLHLSDSSLSSK 55
T+SVL P L +M +S+S L PSIF + + F+ RP+ L LS
Sbjct: 2 TSSVLTPSLKLLAMTNSSSSTLFCIPSIFNISSSESHRFNFSLSSRPVNLTLS------- 54
Query: 56 GFSFKLKKTTHFSSFTTFVAQTSDWADQEEDKDN----TTITLEQEQEENGEEEPNWENQ 111
K K + S TFV+QTS+WA++EE +D T++T+++ E
Sbjct: 55 ---LKSKTLRNSSPVVTFVSQTSNWAEEEEGEDGSIGGTSVTVDESFE------------ 99
Query: 112 GADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDV 171
E+GV F EPPE+AKLFVGNLPYDV
Sbjct: 100 -------------------------------SEDGV----GFPEPPEEAKLFVGNLPYDV 124
Query: 172 DSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGF 231
DS+ LAMLFE+AGTVEI+EV IYNR+TD+SRGFGF
Sbjct: 125 DSQALAMLFEQAGTVEISEV--------------------------IYNRDTDQSRGFGF 158
Query: 232 VTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEV 291
VTMSTVEEAEKAVE F+ ++++GR LTVN+AAPRG++PER PRV++ FRIYVGNLPW+V
Sbjct: 159 VTMSTVEEAEKAVEKFNSFEVNGRRLTVNRAAPRGSRPERQPRVYDAAFRIYVGNLPWDV 218
Query: 292 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 351
D+ RLE++FSEHGKVV+ARVV DRETGRSRGFGFV MS+E E+N AIAALDGQNL+GRAI
Sbjct: 219 DSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNLEGRAI 278
Query: 352 RVNVAEDRQRR 362
+VNVAE+R RR
Sbjct: 279 KVNVAEERTRR 289
>gi|356513816|ref|XP_003525605.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 299
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 201/372 (54%), Positives = 235/372 (63%), Gaps = 83/372 (22%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIF-ARNPYFSIHPRPRPIKLHL--SDSSLSSKGF 57
MS +T + K L+ MA+S LLS PS+F A+N S+ +P+ LHL S+SSL
Sbjct: 4 MSLTTVAAFKSLT-MAESC-LLSLPSLFYAKNNTLSLSIPTKPLNLHLPCSNSSL----- 56
Query: 58 SFKLK-KTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADET 116
F L KTT SS TFVAQTSDWA +E EEE +WENQG
Sbjct: 57 -FPLTTKTTRHSSLLTFVAQTSDWA-----------------KEEEEEETSWENQGD--- 95
Query: 117 EGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKL 176
+ WG EG E+ EE K+FVGNLP+D+DSE L
Sbjct: 96 ----TAWGTEEGGHEEGGFAEKAEED------------------KIFVGNLPFDIDSENL 133
Query: 177 AMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMST 236
A LF +AGTVE+AE VIYNR TDRSRGFGFVTMST
Sbjct: 134 ASLFGQAGTVEVAE--------------------------VIYNRATDRSRGFGFVTMST 167
Query: 237 VEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV---FEPGFRIYVGNLPWEVDN 293
+EE +KAVEMF Y+++GR+LTVNKAAP+G QPER PR F G R+YVGNLPWEVD+
Sbjct: 168 LEELKKAVEMFSGYELNGRVLTVNKAAPKGAQPERPPRPPRSFSSGLRVYVGNLPWEVDD 227
Query: 294 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 353
ARLEQ+FSEHGKV +ARVVYDRETGRSRGFGFVTMSSET++NDAIAALDGQ+LDGRAIRV
Sbjct: 228 ARLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAIAALDGQSLDGRAIRV 287
Query: 354 NVAEDRQRRSSF 365
NVA+DR RSSF
Sbjct: 288 NVAQDRPSRSSF 299
>gi|133246|sp|P19682.1|ROC3_NICSY RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP;
Flags: Precursor
gi|100388|pir||S12109 ribonucleoprotein, 28K, precursor - common tobacco
gi|19750|emb|CAA37880.1| unnamed protein product [Nicotiana sylvestris]
Length = 276
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 179/355 (50%), Positives = 224/355 (63%), Gaps = 83/355 (23%)
Query: 15 MADSTSLLSPPSIFARNPYFSIHP----RPRPIKLHLSDSSLSSKGFSFKLKKTTHFSSF 70
MA + L+S P F S +P + +PI L S +L S K+TT F +F
Sbjct: 1 MATNGCLISLPPFFTTTKSISSYPFLSTQLKPISLSSSLPTLLSLN-----KRTTQFPTF 55
Query: 71 TTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGED 130
+ +++ DNT + +QEQ G + P++
Sbjct: 56 VSVLSE----------DDNTLVLDDQEQ---GGDFPSF---------------------- 80
Query: 131 TVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAE 190
V EAGE EE+ EP EDAKLFVGNLPYD+DSE LA LF++AG VEIAE
Sbjct: 81 -VGEAGE------------TEEYQEPSEDAKLFVGNLPYDIDSEGLAQLFQQAGVVEIAE 127
Query: 191 VKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRY 250
V IYNRETDRSRGFGFVTMSTVEEA+KAVE++ +Y
Sbjct: 128 V--------------------------IYNRETDRSRGFGFVTMSTVEEADKAVELYSQY 161
Query: 251 DIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNAR 310
D++GRLLTVNKAAPRG++PERAPR F+P +RIYVGN+PW++D+ARLEQVFSEHGKVV+AR
Sbjct: 162 DLNGRLLTVNKAAPRGSRPERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSAR 221
Query: 311 VVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
VV+DRE+GRSRGFGFVTMSSE E+++AIA LDGQ LDGR IRVN AE+R RR+++
Sbjct: 222 VVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEERPRRNTY 276
>gi|115480705|ref|NP_001063946.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|52076131|dbj|BAD46644.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|52076138|dbj|BAD46651.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|113632179|dbj|BAF25860.1| Os09g0565200 [Oryza sativa Japonica Group]
gi|215697272|dbj|BAG91266.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737486|dbj|BAG96616.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218202645|gb|EEC85072.1| hypothetical protein OsI_32419 [Oryza sativa Indica Group]
gi|222642113|gb|EEE70245.1| hypothetical protein OsJ_30367 [Oryza sativa Japonica Group]
Length = 322
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 150/213 (70%), Positives = 173/213 (81%), Gaps = 26/213 (12%)
Query: 153 FVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYV 212
+VEPPE+AK++VGNLPYD+DSE+LA LFE+AG VE++EV
Sbjct: 136 YVEPPEEAKVYVGNLPYDIDSERLAQLFEQAGIVEVSEV--------------------- 174
Query: 213 SLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 272
IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYD+DGRLLTVNKAAPRG + ER
Sbjct: 175 -----IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDVDGRLLTVNKAAPRGARVERP 229
Query: 273 PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
PR F P FRIYVGNLPW+VD++RL Q+FSEHGKVV+ARVVYDRETGRSRGFGFVTM+++
Sbjct: 230 PRQFGPSFRIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMATQE 289
Query: 333 ELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
EL+DAIAALDGQ+LDGRA+RVNVAE+R R F
Sbjct: 290 ELDDAIAALDGQSLDGRALRVNVAEERPPRRGF 322
>gi|19032262|emb|CAD18922.1| RNA-binding protein precursor [Persea americana]
Length = 315
Score = 306 bits (785), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 185/357 (51%), Positives = 235/357 (65%), Gaps = 49/357 (13%)
Query: 13 SSMADSTSLLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSFKLKKTTHFSSFTT 72
+S++ ++L P ++ P+ SI + + + L S SS+ S S K K ++ SF
Sbjct: 4 TSISPLSTLFCPKTLI---PFLSIPSKAKLLHLSHSTSSVPS-WVSLKSKLSSSGGSFIA 59
Query: 73 FVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGEDT- 131
VA+TSDWA Q D DN E GE +WE +G TE +SDW ED
Sbjct: 60 LVARTSDWARQ--DGDN----------EIGEAGFDWEGEG---TEAQVSDWEGEVEEDGE 104
Query: 132 -VVEAG-ERQEESGEEGVFEEEE-FVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEI 188
+ E+G E +EESGE G +EE+ + PPE+ K+FVGNLP+D++S LA LF KAG VE
Sbjct: 105 VLGESGAEDEEESGEVGFADEEDSYSAPPEEVKIFVGNLPFDLESADLADLFNKAGVVES 164
Query: 189 AEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFH 248
AEV IYNRETD+SRGFGFV+MSTVEE KA+EMF
Sbjct: 165 AEV--------------------------IYNRETDQSRGFGFVSMSTVEEVVKAIEMFD 198
Query: 249 RYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVN 308
RYDI+GR LTVNKAAPRG++ ER PR FEP FR+YVGN+PW+VDN RLEQ+FSE+GKV
Sbjct: 199 RYDINGRTLTVNKAAPRGSRAERPPRDFEPAFRVYVGNIPWQVDNLRLEQLFSEYGKVEE 258
Query: 309 ARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
AR+V+DRETGRSRGFGFVTMSS+ E+ DAIAALDG +LDGRAI+V++A++R RR F
Sbjct: 259 ARIVFDRETGRSRGFGFVTMSSQIEMEDAIAALDGSDLDGRAIKVSMAQERPRRGHF 315
>gi|388508864|gb|AFK42498.1| unknown [Medicago truncatula]
Length = 300
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 188/353 (53%), Positives = 221/353 (62%), Gaps = 66/353 (18%)
Query: 14 SMADSTSLLSPPSIF---ARNPYFSIHPRPRPIKLHLSDSSLSSKGFSFKLKKTTHFSSF 70
+MA+S LLS PS+F +++P+ S +P ++ +SS S S K+ T SS
Sbjct: 10 TMAESC-LLSQPSLFYTKSKSPFISNSAKPFKVQNPSYNSSKFSSSVSLVSKRRTRHSSL 68
Query: 71 TTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGED 130
TFVAQTSDWA QEE +D T WENQ AD T W
Sbjct: 69 VTFVAQTSDWAQQEEKEDGAT----------------WENQ-ADAT------W------- 98
Query: 131 TVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAE 190
V E + E E FEE P ED K+FVGNLP+DVDSEKLA LFE++GTVEIAE
Sbjct: 99 -VGETESNENEEVEVASFEE-----PSEDLKIFVGNLPFDVDSEKLAQLFEQSGTVEIAE 152
Query: 191 VKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRY 250
V IYNR+TDRSRGFGFVTMST EE E+AV F +
Sbjct: 153 V--------------------------IYNRDTDRSRGFGFVTMSTSEEVERAVNKFSGF 186
Query: 251 DIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNAR 310
++DGRLLTVN AAPRGT R PR F G R YVGNLPW+VDN+ LEQ+FSEHGKV +A+
Sbjct: 187 ELDGRLLTVNNAAPRGTPRLRQPRTFNSGLRAYVGNLPWDVDNSSLEQLFSEHGKVESAQ 246
Query: 311 VVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 363
VVYDRETGR RGFGFVTMS+E E+NDAIAALDGQ+ +GRAIRVNVAE+R RRS
Sbjct: 247 VVYDRETGRLRGFGFVTMSNEAEMNDAIAALDGQSFNGRAIRVNVAEERPRRS 299
>gi|242048440|ref|XP_002461966.1| hypothetical protein SORBIDRAFT_02g011330 [Sorghum bicolor]
gi|241925343|gb|EER98487.1| hypothetical protein SORBIDRAFT_02g011330 [Sorghum bicolor]
Length = 294
Score = 303 bits (777), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 154/236 (65%), Positives = 181/236 (76%), Gaps = 32/236 (13%)
Query: 128 GEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVE 187
ED VEA E+ E E+VEPPE+AK++VGNLPYDVDSE+LA LFE+AG VE
Sbjct: 90 AEDDAVEASAAVEDE------EVGEYVEPPEEAKVYVGNLPYDVDSERLAQLFEQAGVVE 143
Query: 188 IAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 247
+AEV IYNRETDRSRGFGFVTMSTVEEA+KAVEM
Sbjct: 144 VAEV--------------------------IYNRETDRSRGFGFVTMSTVEEADKAVEML 177
Query: 248 HRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVV 307
HRYD++GRLLTVNKAAPRG++ +R PR P RIYVGNLPW+VD+++L Q+FSEHGKVV
Sbjct: 178 HRYDVNGRLLTVNKAAPRGSRVDRPPRQSGPSLRIYVGNLPWQVDDSKLVQMFSEHGKVV 237
Query: 308 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 363
+ARVVYDRETGRSRGFGFVTM+++ EL+DAIAALDGQ+LDGRA+RVNVAE+R RRS
Sbjct: 238 DARVVYDRETGRSRGFGFVTMATQDELDDAIAALDGQSLDGRALRVNVAEERPRRS 293
>gi|133247|sp|P28644.1|ROC1_SPIOL RecName: Full=28 kDa ribonucleoprotein, chloroplastic; Short=28RNP
Length = 233
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 167/257 (64%), Positives = 189/257 (73%), Gaps = 33/257 (12%)
Query: 108 WENQGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNL 167
WE +G+ T L +PEG V G + S E GV + F EPPE+AKLFVGNL
Sbjct: 8 WEQEGS--TNAVLEGESDPEG---AVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGNL 62
Query: 168 PYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSR 227
PYDVDSEKLA +F+ AG VEIAEV IYNRETDRSR
Sbjct: 63 PYDVDSEKLAGIFDAAGVVEIAEV--------------------------IYNRETDRSR 96
Query: 228 GFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV-FEPGFRIYVGN 286
GFGFVTMSTVEEAEKAVE+ + YD+DGR LTVNKAAPRG+ PERAPR FEP R+YVGN
Sbjct: 97 GFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGS-PERAPRGDFEPSCRVYVGN 155
Query: 287 LPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL 346
LPW+VD +RLEQ+FSEHGKVV+ARVV DRETGRSRGFGFVTMSSE+E+NDAIAALDGQ L
Sbjct: 156 LPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTL 215
Query: 347 DGRAIRVNVAEDRQRRS 363
DGRA+RVNVAE+R RR+
Sbjct: 216 DGRAVRVNVAEERPRRA 232
>gi|149391365|gb|ABR25700.1| chloroplast 28 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 186
Score = 302 bits (774), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/212 (70%), Positives = 172/212 (81%), Gaps = 26/212 (12%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
VEPPE+AK++VGNLPYD+DSE+LA LFE+AG VE++EV
Sbjct: 1 VEPPEEAKVYVGNLPYDIDSERLAQLFEQAGIVEVSEV---------------------- 38
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAP 273
IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYD+DGRLLTVNKAAPRG + ER P
Sbjct: 39 ----IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDVDGRLLTVNKAAPRGARVERPP 94
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
R F P FRIYVGNLPW+VD++RL Q+FSEHGKVV+ARVVYDRETGRSRGFGFVTM+++ E
Sbjct: 95 RQFGPSFRIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMATQEE 154
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
L+DAIAALDGQ+LDGRA+RVNVAE+R R F
Sbjct: 155 LDDAIAALDGQSLDGRALRVNVAEERPPRRGF 186
>gi|388512737|gb|AFK44430.1| unknown [Medicago truncatula]
Length = 291
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 181/351 (51%), Positives = 208/351 (59%), Gaps = 67/351 (19%)
Query: 18 STSLLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSFKLKKTTHFSSFTTFVAQT 77
ST+ L A + S + +P L SL+ S K ++ S FVAQ
Sbjct: 5 STTPLFKSLTMAESCLLSSQSKSKPTFFSLPSKSLNLH-LSLKTNRSISISPSPLFVAQ- 62
Query: 78 SDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGEDTVVEAGE 137
+ D T +L DE G DW EP + E G
Sbjct: 63 --------EGDTLTTSL-------------------DEEAGLSLDW-EPTADAAETETGA 94
Query: 138 RQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLF 197
G FVEPPEDAKLFVGN P+DVDSEKLAMLF +AGTVEIAEV
Sbjct: 95 DDSAEGY--------FVEPPEDAKLFVGNFPFDVDSEKLAMLFGQAGTVEIAEV------ 140
Query: 198 GNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL 257
IYNR+TD SRGFGFVTM+TVEEAE AVE F+ YD +GR L
Sbjct: 141 --------------------IYNRQTDLSRGFGFVTMNTVEEAESAVEKFNGYDYNGRSL 180
Query: 258 TVNKAAPRGTQPER---APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYD 314
VNKA+P+G++PER APR FEP RIYV NL WEVDN+RLEQVFSEHGK+V+ARVVYD
Sbjct: 181 VVNKASPKGSRPERTERAPRTFEPVLRIYVANLAWEVDNSRLEQVFSEHGKIVSARVVYD 240
Query: 315 RETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
RETGRSRGFGFVTMS ETE+NDAIAALDGQ+L+GR IRV+VAEDR RR SF
Sbjct: 241 RETGRSRGFGFVTMSDETEMNDAIAALDGQSLEGRTIRVSVAEDRPRRGSF 291
>gi|21309|emb|CAA41023.1| 28kD RNA binding protein [Spinacia oleracea]
Length = 226
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/257 (64%), Positives = 189/257 (73%), Gaps = 33/257 (12%)
Query: 108 WENQGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNL 167
WE +G+ T L +PEG V G + S E GV + F EPPE+AKLFVGNL
Sbjct: 1 WEQEGS--TNAVLEGESDPEG---AVSWGSETQVSDEGGVEGGQGFSEPPEEAKLFVGNL 55
Query: 168 PYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSR 227
PYDVDSEKLA +F+ AG VEIAEV IYNRETDRSR
Sbjct: 56 PYDVDSEKLAGIFDAAGVVEIAEV--------------------------IYNRETDRSR 89
Query: 228 GFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV-FEPGFRIYVGN 286
GFGFVTMSTVEEAEKAVE+ + YD+DGR LTVNKAAPRG+ PERAPR FEP R+YVGN
Sbjct: 90 GFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGS-PERAPRGDFEPSCRVYVGN 148
Query: 287 LPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL 346
LPW+VD +RLEQ+FSEHGKVV+ARVV DRETGRSRGFGFVTMSSE+E+NDAIAALDGQ L
Sbjct: 149 LPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTL 208
Query: 347 DGRAIRVNVAEDRQRRS 363
DGRA+RVNVAE+R RR+
Sbjct: 209 DGRAVRVNVAEERPRRA 225
>gi|133248|sp|P19683.1|ROC4_NICSY RecName: Full=31 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor
gi|19741|emb|CAA40364.1| 31kD chloroplast ribonucleoprotein [Nicotiana sylvestris]
gi|19756|emb|CAA37885.1| unnamed protein product [Nicotiana sylvestris]
Length = 315
Score = 301 bits (772), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 198/373 (53%), Positives = 240/373 (64%), Gaps = 66/373 (17%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIFARN--------PYFSIHPRPRPIKLHLSDSSL 52
MS +T ++KP SSMA ++ L+S P +FA PY S +P + LHLS
Sbjct: 1 MSCATKPIIKP-SSMATNSCLISLPPLFATTTKSKSFAYPYLSNTLKPIKL-LHLS---- 54
Query: 53 SSKGFSFKLKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQG 112
T+ + +TS A QEE+ T+ L+ + +E+G+ N+E G
Sbjct: 55 -----------CTYSPCILSPKKKTSVSALQEEEN---TLILDGQGQESGDLF-NFEPSG 99
Query: 113 ADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVD 172
+ E E V G+ E E EEEEF EPPEDAKLFVGNLPYDVD
Sbjct: 100 EETEE-----------EGFVEAVGDAGESDEVEADEEEEEFQEPPEDAKLFVGNLPYDVD 148
Query: 173 SEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFV 232
SE LA LFE+AG VEIAEV IYNR+TD+SRGFGFV
Sbjct: 149 SEGLARLFEQAGVVEIAEV--------------------------IYNRDTDQSRGFGFV 182
Query: 233 TMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVD 292
TMSTVEEAEKAVEM++RYD++GRLLTVNKAA RG +PER PR FE +RIYVGN+PW +D
Sbjct: 183 TMSTVEEAEKAVEMYNRYDVNGRLLTVNKAARRGERPERPPRTFEQSYRIYVGNIPWGID 242
Query: 293 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 352
+ARLEQ+FSEHGKVV+ARVVYDRETGRSRGFGFVTM+SE E++DAIA LDGQ+LDGR IR
Sbjct: 243 DARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIR 302
Query: 353 VNVAEDRQRRSSF 365
VNVAEDR RR++F
Sbjct: 303 VNVAEDRSRRNTF 315
>gi|224055617|ref|XP_002298568.1| predicted protein [Populus trichocarpa]
gi|118486956|gb|ABK95311.1| unknown [Populus trichocarpa]
gi|222845826|gb|EEE83373.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/245 (66%), Positives = 190/245 (77%), Gaps = 33/245 (13%)
Query: 121 SDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLF 180
SDW + + EDTV EES +G EE F EPPE+AKL+VGNLPYDV+SE LA LF
Sbjct: 65 SDWAQQDEEDTVTLG----EESFGDG--SEETFPEPPEEAKLYVGNLPYDVNSENLAQLF 118
Query: 181 EKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEA 240
++AGTVE+AE+ IYNRETD+SRGFGFVTMSTV+EA
Sbjct: 119 DQAGTVEVAEI--------------------------IYNRETDQSRGFGFVTMSTVDEA 152
Query: 241 EKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 300
EKA+E FHRYD++GR LTVNKAAPRG++PER P VF+ +RIYVGNLPW+VD+ARLEQVF
Sbjct: 153 EKAIEKFHRYDLNGRFLTVNKAAPRGSRPER-PSVFKIAYRIYVGNLPWQVDDARLEQVF 211
Query: 301 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
SEHG+VVNARVV DRETGRSRGFGFVTMSSETELNDAIAALDGQ+LDGRAI VN+A++R
Sbjct: 212 SEHGQVVNARVVCDRETGRSRGFGFVTMSSETELNDAIAALDGQSLDGRAITVNIAQERP 271
Query: 361 RRSSF 365
RR SF
Sbjct: 272 RRGSF 276
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 126/303 (41%), Gaps = 87/303 (28%)
Query: 12 LSSMADSTSLLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSFKLKKTTHFSSFT 71
L S+ +T+ + SI ++P+ SI +P IK+ S S S KT++FS+F
Sbjct: 6 LMSVYRTTNTVFDTSI--KSPFISITSKP--IKVVFSTSFPSWVSL-----KTSNFSTFN 56
Query: 72 T--FVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWE----------NQGADETEGN 119
T VAQTSDWA Q+E+ T+TL +E +G EE E N D N
Sbjct: 57 TIPLVAQTSDWAQQDEED---TVTLGEESFGDGSEETFPEPPEEAKLYVGNLPYDVNSEN 113
Query: 120 LSDWGEPEGEDTVVEAGERQEESGEEG--------VFEEEEFVEP--------------- 156
L+ + G V E +E G V E E+ +E
Sbjct: 114 LAQLFDQAGTVEVAEIIYNRETDQSRGFGFVTMSTVDEAEKAIEKFHRYDLNGRFLTVNK 173
Query: 157 -------PEDA-------KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGF 202
PE +++VGNLP+ VD +L +F + G V A V
Sbjct: 174 AAPRGSRPERPSVFKIAYRIYVGNLPWQVDDARLEQVFSEHGQVVNARV----------- 222
Query: 203 HMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
VC +RET RSRGFGFVTMS+ E A+ +DGR +TVN A
Sbjct: 223 ---VC------------DRETGRSRGFGFVTMSSETELNDAIAALDGQSLDGRAITVNIA 267
Query: 263 APR 265
R
Sbjct: 268 QER 270
>gi|162463757|ref|NP_001105347.1| nucleic acid binding protein1 [Zea mays]
gi|168526|gb|AAA33486.1| nucleic acid-binding protein [Zea mays]
gi|195637380|gb|ACG38158.1| ribonucleoprotein [Zea mays]
gi|219884029|gb|ACL52389.1| unknown [Zea mays]
gi|414884557|tpg|DAA60571.1| TPA: nucleic acid binding protein1 [Zea mays]
Length = 303
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/207 (69%), Positives = 169/207 (81%), Gaps = 26/207 (12%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
PPE+AK++VGNLPYDVDSE+LA LF++AG VE+AEV
Sbjct: 121 PPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEV------------------------ 156
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV 275
IYNRETD+SRGFGFVTMSTVEEAEKAVEMFHRYD++GRLLTVNKAAPRG++ +R PR
Sbjct: 157 --IYNRETDQSRGFGFVTMSTVEEAEKAVEMFHRYDVNGRLLTVNKAAPRGSRVDRPPRQ 214
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
P RIYVGNLPW+VD++RL ++FSEHGKVV+ARVVYDRETGRSRGFGFVTM+S+ EL+
Sbjct: 215 SGPSLRIYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDRETGRSRGFGFVTMASQDELD 274
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRR 362
DAIAALDGQ+LDGRA+RVNVAE+R RR
Sbjct: 275 DAIAALDGQSLDGRALRVNVAEERPRR 301
>gi|326493824|dbj|BAJ85374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 171/211 (81%), Gaps = 26/211 (12%)
Query: 152 EFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFY 211
E+VEPPE+AK++VGNLPYDVDSE+LA LFE+AG VE++EV
Sbjct: 108 EYVEPPEEAKVYVGNLPYDVDSERLAQLFEQAGVVEVSEV-------------------- 147
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
IYNRETD+SRGFGFVTMST+EEAEKAVEMFHRYD++GRLLTVNKAAPRG + ER
Sbjct: 148 ------IYNRETDQSRGFGFVTMSTIEEAEKAVEMFHRYDVNGRLLTVNKAAPRGARVER 201
Query: 272 APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
PR FRIYVGNLPW+VD++RL ++FSEHGKVV+ARVVYDR+TGRSRGFGFVTM+S+
Sbjct: 202 PPRDSGSSFRIYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQ 261
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
EL+DAIAALDGQ+L+GRA+RVNVAE+R R
Sbjct: 262 EELDDAIAALDGQSLEGRALRVNVAEERPPR 292
>gi|3550467|emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 143/211 (67%), Positives = 171/211 (81%), Gaps = 26/211 (12%)
Query: 152 EFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFY 211
E+VEPPE+AK++VGNLPYDVDSE+LA LFE+AG VE++EV
Sbjct: 108 EYVEPPEEAKVYVGNLPYDVDSERLAQLFEQAGVVEVSEV-------------------- 147
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
IYNRETD+SRGFGFVTMST+EEAEKAVEMFHRYD++GRLLTVNKAAPRG + ER
Sbjct: 148 ------IYNRETDQSRGFGFVTMSTIEEAEKAVEMFHRYDVNGRLLTVNKAAPRGARVER 201
Query: 272 APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
PR FRIYVGNLPW+VD++RL ++FSEHGKVV+A+VVYDR+TGRSRGFGFVTM+S+
Sbjct: 202 PPRDSGSSFRIYVGNLPWQVDDSRLVELFSEHGKVVDAKVVYDRDTGRSRGFGFVTMASQ 261
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
EL+DAIAALDGQ+L+GRA+RVNVAE+R R
Sbjct: 262 EELDDAIAALDGQSLEGRALRVNVAEERPPR 292
>gi|2330647|emb|CAA74889.1| ribonucleoprotein [Pisum sativum]
gi|10179830|gb|AAG13900.1| 33 kDa ribonucleoprotein [Pisum sativum]
Length = 291
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 180/328 (54%), Positives = 205/328 (62%), Gaps = 72/328 (21%)
Query: 41 RPIKLHLSDSSLSSKGFSFKLKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEE 100
+P K H+S +S S S K + T F AQ + T+T E+
Sbjct: 33 KPFKFHISLNSSPSLTLSLKTNRATPL-----FAAQ-----------EGETLTTEE---- 72
Query: 101 NGEEEPNWENQGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDA 160
G ETEG L DW EPE + E GE+ + +F EP EDA
Sbjct: 73 -----------GVVETEG-LIDW-EPEAAE--------NETGGED--YAGGDFAEPSEDA 109
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVGNLPYDVDSEKLAMLFE AGTVEIAEV IYN
Sbjct: 110 KLFVGNLPYDVDSEKLAMLFEPAGTVEIAEV--------------------------IYN 143
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR---VFE 277
RETD+SRGFGFVTMSTVEEAE F+RYD +GR LTVNKAAPRG++PER R FE
Sbjct: 144 RETDQSRGFGFVTMSTVEEAEAGAAKFNRYDYNGRPLTVNKAAPRGSRPEREERPPRTFE 203
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P R+YVGNL WE+D++RLEQVFSEHGKVV+ARVVYDRETGRSRGFGFVTMS E E+NDA
Sbjct: 204 PVLRVYVGNLSWELDDSRLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEKEMNDA 263
Query: 338 IAALDGQNLDGRAIRVNVAEDRQRRSSF 365
IAALDGQ L+GR I+V+VAEDR RR SF
Sbjct: 264 IAALDGQILEGRTIKVSVAEDRPRRGSF 291
>gi|2443390|dbj|BAA22411.1| Ps16 protein [Triticum aestivum]
Length = 293
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 141/207 (68%), Positives = 167/207 (80%), Gaps = 26/207 (12%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
PPE+AK++VGNLPYDVDSE+LA LFE+AG VE++EV
Sbjct: 111 PPEEAKVYVGNLPYDVDSERLAQLFEQAGVVEVSEV------------------------ 146
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV 275
IYNRETD+SRGFGFVTMST+EEAEKAVEMFHRYD++GRLLTVNKAAPRG + ER PR
Sbjct: 147 --IYNRETDQSRGFGFVTMSTIEEAEKAVEMFHRYDVNGRLLTVNKAAPRGARVERPPRD 204
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
FRIYVGNLPW+VD++RL ++FSEHGKVV+ARVVYDR+TGRSRGFGFVTM+S+ EL+
Sbjct: 205 SGSSFRIYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQPELD 264
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRR 362
DAIAALDGQ+L+GRA+RVNVAE+R R
Sbjct: 265 DAIAALDGQSLEGRALRVNVAEERPPR 291
>gi|1054915|gb|AAA81023.1| CEBP-1 [Dianthus caryophyllus]
Length = 292
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 179/365 (49%), Positives = 218/365 (59%), Gaps = 76/365 (20%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIFARNPYFSIHPRPRPIKLHLSDSSLSSKGFSFK 60
M++STA+ L ++A S + P SIF P L L + ++ F +K
Sbjct: 1 MATSTATN-HFLKTLAISITTQKPTSIFP------------PKSLVLEKPTTNNSQFHYK 47
Query: 61 LKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNL 120
T H QTSD+ ++E N I E+E E E NWE
Sbjct: 48 ---THHLCCMCCL--QTSDF--EQESSPNAVID-EEENVEKTEAAVNWE----------- 88
Query: 121 SDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLF 180
D EP+ G E+ F EP ED KL+VGNLP+DVDSEKLA +F
Sbjct: 89 -DASEPQPSS---------------GFGSEDGFSEPSEDVKLYVGNLPFDVDSEKLANMF 132
Query: 181 EKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEA 240
+ AG VEIAEV IYNRETDRSRGFGFVTMSTVEEA
Sbjct: 133 DAAGVVEIAEV--------------------------IYNRETDRSRGFGFVTMSTVEEA 166
Query: 241 EKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF-RIYVGNLPWEVDNARLEQV 299
+KAVEMFH Y+++GRLLTVNKAAPRG++PE+APR F P YVGNLPW+VDN RLEQ+
Sbjct: 167 DKAVEMFHSYELNGRLLTVNKAAPRGSRPEKAPREFCPLLSESYVGNLPWDVDNDRLEQL 226
Query: 300 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA-IAALDGQNLDGRAIRVNVAED 358
SEHGKV++ARVV DRET RSRGFGFVTM+SETE+NDA + ALDG++L+GR IRVNVAE+
Sbjct: 227 SSEHGKVLSARVVSDRETERSRGFGFVTMASETEMNDATLGALDGESLEGRPIRVNVAEE 286
Query: 359 RQRRS 363
R RR+
Sbjct: 287 RPRRT 291
>gi|357160118|ref|XP_003578663.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 296
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/208 (68%), Positives = 166/208 (79%), Gaps = 27/208 (12%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
PPE+AK++VGNLPYD+DSE+LA LFE+AG VE++EV
Sbjct: 113 PPEEAKVYVGNLPYDIDSERLAQLFEQAGVVEVSEV------------------------ 148
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV 275
IYNRETD+SRGFGFVTMST+EEAEKAVEMFHRYD+ GRLLTVNKAAPRG + ER R
Sbjct: 149 --IYNRETDQSRGFGFVTMSTIEEAEKAVEMFHRYDVGGRLLTVNKAAPRGARVERPARD 206
Query: 276 FE-PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
F FRIYVGNLPW+VD++RL Q+FSEHGKVV+ARVVYDRETGRSRGFGFVTM+S+ EL
Sbjct: 207 FGGSSFRIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMASQEEL 266
Query: 335 NDAIAALDGQNLDGRAIRVNVAEDRQRR 362
+DAIAALDGQ+L+GRA+RVNVAE+R R
Sbjct: 267 DDAIAALDGQSLEGRALRVNVAEERPPR 294
>gi|388518645|gb|AFK47384.1| unknown [Lotus japonicus]
Length = 307
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 183/374 (48%), Positives = 220/374 (58%), Gaps = 76/374 (20%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIFARNPYFSIHPRP-RPIKLHLSDSSLSSKGFSF 59
MS +T K L+ +A+S LLS PS+F+ + I + +KL L S+ S S
Sbjct: 1 MSITTMPAFKFLT-VAESC-LLSQPSLFSSKTRYPILSNSLKTLKLQLPCSNSSPF--SP 56
Query: 60 KLKKTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGN 119
L TTH S TFVAQTSDWA QEE+ EN E EP W N+ +DETEG
Sbjct: 57 SLLSTTHRSPLLTFVAQTSDWAQQEEEGGAAW--------EN-EGEPTWANEDSDETEG- 106
Query: 120 LSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAML 179
GE+ V A EP ED K+FVGNLP+DV+SE LAML
Sbjct: 107 --------GEEVVASA-------------------EPSEDLKIFVGNLPWDVESENLAML 139
Query: 180 FEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEE 239
FE+AG+VE AEV IYN+ T++SRGFGFV MST E+
Sbjct: 140 FEEAGSVEFAEV--------------------------IYNKATNQSRGFGFVIMSTAED 173
Query: 240 AEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR-------IYVGNLPWEVD 292
EKA+ F Y++DGR+LTVNKA P+ +PER PR F G +YVGNLPW VD
Sbjct: 174 LEKALNKFSGYELDGRVLTVNKATPKEARPERPPRTFGSGSGSRDSGLSVYVGNLPWSVD 233
Query: 293 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 352
ARLE++F EHG V NAR+V DRETGRSRGFGFVTMSSE ++N AIAALDGQ+LDGR IR
Sbjct: 234 AARLEEIFREHGNVENARIVMDRETGRSRGFGFVTMSSEADINGAIAALDGQSLDGRTIR 293
Query: 353 VNVAEDRQ-RRSSF 365
V+VAE R RSSF
Sbjct: 294 VSVAEGRSGGRSSF 307
>gi|363807234|ref|NP_001242356.1| 31 kDa ribonucleoprotein, chloroplastic-like [Glycine max]
gi|255645622|gb|ACU23305.1| unknown [Glycine max]
Length = 300
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 193/369 (52%), Positives = 229/369 (62%), Gaps = 75/369 (20%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIF-ARNPYFSIHPRPRPIKLHL--SDSSLSSKGF 57
+S ST L+ MA+S LLS PS+F A+N S+ P+ L S+SSL
Sbjct: 3 LSLSTVPAFNSLT-MAESC-LLSLPSLFYAKNKTLSLSIPTNPLNLQFPCSNSSL----- 55
Query: 58 SFKLK-KTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADET 116
F L KTT SS TFVAQTS WA + E+++ ENQG
Sbjct: 56 -FPLTTKTTRHSSLLTFVAQTSGWAKEGEEEEAAW-----------------ENQGD--- 94
Query: 117 EGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKL 176
+ WG EG D + + GE E E+ K+FVGNLP+D DSEKL
Sbjct: 95 ----TAWGTEEGGDDIEDGGEGGFAEEEA------------EEVKIFVGNLPFDFDSEKL 138
Query: 177 AMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMST 236
A LFE+AGTVE+AEV IYNR TDRSRGFGFVTMST
Sbjct: 139 ASLFEQAGTVEVAEV--------------------------IYNRATDRSRGFGFVTMST 172
Query: 237 VEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARL 296
+EE EKAV+MF Y+++GR+LTVNKAAP+G QPER PR FR+YVGNLPW+VDN+RL
Sbjct: 173 IEELEKAVKMFSGYELNGRVLTVNKAAPKGAQPERPPRP-PQSFRVYVGNLPWDVDNSRL 231
Query: 297 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
EQ+FSEHGKV +ARVVYDRETGRSRGFGFVTMSSET++NDAIAALDGQ+LDGRAIRVNVA
Sbjct: 232 EQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAIAALDGQSLDGRAIRVNVA 291
Query: 357 EDRQRRSSF 365
R + SSF
Sbjct: 292 AQRPKPSSF 300
>gi|193850551|gb|ACF22879.1| RNA-binding protein [Glycine max]
Length = 302
Score = 280 bits (716), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 193/369 (52%), Positives = 229/369 (62%), Gaps = 75/369 (20%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIF-ARNPYFSIHPRPRPIKLHL--SDSSLSSKGF 57
+S ST L+ MA+S LLS PS+F A+N S+ P+ L S+SSL
Sbjct: 5 LSLSTVPAFNSLT-MAESC-LLSLPSLFYAKNKTLSLSIPTNPLNLQFPCSNSSL----- 57
Query: 58 SFKLK-KTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADET 116
F L KTT SS TFVAQTS WA + E+++ ENQG
Sbjct: 58 -FPLTTKTTRHSSLLTFVAQTSGWAKEGEEEEAAW-----------------ENQGD--- 96
Query: 117 EGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKL 176
+ WG EG D + + GE E E+ K+FVGNLP+D DSEKL
Sbjct: 97 ----TAWGTEEGGDDIEDGGEGGFAEEEA------------EEVKIFVGNLPFDFDSEKL 140
Query: 177 AMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMST 236
A LFE+AGTVE+AEV IYNR TDRSRGFGFVTMST
Sbjct: 141 ASLFEQAGTVEVAEV--------------------------IYNRATDRSRGFGFVTMST 174
Query: 237 VEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARL 296
+EE EKAV+MF Y+++GR+LTVNKAAP+G QPER PR FR+YVGNLPW+VDN+RL
Sbjct: 175 IEELEKAVKMFSGYELNGRVLTVNKAAPKGAQPERPPRP-PQSFRVYVGNLPWDVDNSRL 233
Query: 297 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
EQ+FSEHGKV +ARVVYDRETGRSRGFGFVTMSSET++NDAIAALDGQ+LDGRAIRVNVA
Sbjct: 234 EQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAIAALDGQSLDGRAIRVNVA 293
Query: 357 EDRQRRSSF 365
R + SSF
Sbjct: 294 AQRPKPSSF 302
>gi|226509575|ref|NP_001149184.1| LOC100282806 [Zea mays]
gi|195625314|gb|ACG34487.1| ribonucleoprotein [Zea mays]
Length = 286
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/258 (59%), Positives = 185/258 (71%), Gaps = 40/258 (15%)
Query: 109 ENQGADETEGNLSDWGEPEGEDTVVEAGERQE--ESGEEGVFEEEEF--VEPPEDAKLFV 164
E + ADE E E GE +EAGE +E SG EG E ++ VEPPE+AK++V
Sbjct: 63 EAKSADEEE-------EKAGEPVDMEAGEFEEVLASGGEG---EGQYAAVEPPEEAKVYV 112
Query: 165 GNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETD 224
GNLPYDVDSE LA +F++AG VE+AEV IYNRET
Sbjct: 113 GNLPYDVDSEGLAQIFDQAGVVEVAEV--------------------------IYNRETG 146
Query: 225 RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYV 284
+SRGFGFVTMSTVEEA+KA+EMF+RYDI GRLL VN+A+ RGT+ ER R F P FR YV
Sbjct: 147 QSRGFGFVTMSTVEEADKAIEMFNRYDISGRLLNVNRASSRGTRMERPQRQFAPAFRAYV 206
Query: 285 GNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 344
GNLPW+VD++RL Q+FSEHG+VV+A+VVYDRETGRSRGFGFV+M S+ ELNDAI+ALDGQ
Sbjct: 207 GNLPWQVDDSRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKEELNDAISALDGQ 266
Query: 345 NLDGRAIRVNVAEDRQRR 362
LDGR +RVNVA +R +R
Sbjct: 267 ELDGRPLRVNVAAERPQR 284
>gi|99029149|gb|ABF60862.1| GRSF [Lilium longiflorum]
Length = 207
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/206 (67%), Positives = 167/206 (81%), Gaps = 28/206 (13%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
AKLFVGN+PYD DSEKLA LF+KAG VE+AEV IY
Sbjct: 30 AKLFVGNIPYD-DSEKLANLFDKAGVVEVAEV--------------------------IY 62
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
NRETD+SRGFGFVTMSTVEEAE+AVEM HRYDI+GR LTVNKAAPRG++PER PR +P
Sbjct: 63 NRETDQSRGFGFVTMSTVEEAERAVEMLHRYDINGRNLTVNKAAPRGSRPER-PRESDPS 121
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
R+YVGNLPW+VD++RLEQ+FSEHGKV++ARVVYDR++GRSRGFGFVT+++ E++DAIA
Sbjct: 122 LRVYVGNLPWQVDDSRLEQLFSEHGKVIDARVVYDRQSGRSRGFGFVTLATREEVDDAIA 181
Query: 340 ALDGQNLDGRAIRVNVAEDRQRRSSF 365
ALDGQ+L+GRA+RVNVAE+R RRSSF
Sbjct: 182 ALDGQSLEGRALRVNVAEERPRRSSF 207
>gi|413921823|gb|AFW61755.1| ribonucleoprotein [Zea mays]
Length = 286
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 153/258 (59%), Positives = 184/258 (71%), Gaps = 40/258 (15%)
Query: 109 ENQGADETEGNLSDWGEPEGEDTVVEAGERQE--ESGEEGVFEEEEF--VEPPEDAKLFV 164
E + ADE E E GE +EAGE +E SG EG E ++ VEPPE+AK++V
Sbjct: 63 EAKSADEEE-------EKAGEPVEMEAGEFEEVLASGGEG---EGQYAAVEPPEEAKVYV 112
Query: 165 GNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETD 224
GNLPYDVDSE LA +F++AG VE+AEV IYNRET
Sbjct: 113 GNLPYDVDSEGLAQIFDQAGVVEVAEV--------------------------IYNRETG 146
Query: 225 RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYV 284
+SRGFGFVTMSTVEEA+KA+EMF RYDI GRLL VN+A+ RGT+ ER R F P FR YV
Sbjct: 147 QSRGFGFVTMSTVEEADKAIEMFSRYDISGRLLNVNRASSRGTRMERPQRQFAPAFRAYV 206
Query: 285 GNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 344
GNLPW+VD++RL Q+FSEHG+VV+A+VVYDRETGRSRGFGFV+M S+ ELNDAI+ALDGQ
Sbjct: 207 GNLPWQVDDSRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKEELNDAISALDGQ 266
Query: 345 NLDGRAIRVNVAEDRQRR 362
LDGR +RVNVA +R +R
Sbjct: 267 ELDGRPLRVNVAAERPQR 284
>gi|242079661|ref|XP_002444599.1| hypothetical protein SORBIDRAFT_07g024400 [Sorghum bicolor]
gi|241940949|gb|EES14094.1| hypothetical protein SORBIDRAFT_07g024400 [Sorghum bicolor]
Length = 292
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 141/243 (58%), Positives = 169/243 (69%), Gaps = 47/243 (19%)
Query: 120 LSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAML 179
L+ E EGE VEPPE+AK++VGNLPYD+DSE LA L
Sbjct: 95 LASGDEGEGEYAA---------------------VEPPEEAKVYVGNLPYDIDSEGLAQL 133
Query: 180 FEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEE 239
F++AG VE+AE VIYNRET +SRGFGFVTMST+EE
Sbjct: 134 FDQAGVVEVAE--------------------------VIYNRETGQSRGFGFVTMSTIEE 167
Query: 240 AEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 299
A+KA+EMF+RYDI GRLL VN+A+PRGT+ ER PR F P FR YVGNLPW+VD++RL Q+
Sbjct: 168 ADKAIEMFNRYDISGRLLNVNRASPRGTRMERPPRQFAPAFRAYVGNLPWQVDDSRLVQL 227
Query: 300 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
FSEHG+VVNA VVYDRE+GRSRGFGFVTM S+ EL+DAI+ALDGQ LDGR +RVNVA +R
Sbjct: 228 FSEHGEVVNATVVYDRESGRSRGFGFVTMVSKEELDDAISALDGQELDGRPLRVNVAAER 287
Query: 360 QRR 362
+R
Sbjct: 288 PQR 290
>gi|255636284|gb|ACU18482.1| unknown [Glycine max]
Length = 280
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 182/349 (52%), Positives = 214/349 (61%), Gaps = 83/349 (23%)
Query: 1 MSSSTASVLKPLSSMADSTSLLSPPSIF-ARNPYFSIHPRPRPIKLHL--SDSSLSSKGF 57
MS +T + K L+ MA+S LLS PS+F A+N S+ +P+ LHL S+SSL
Sbjct: 4 MSLTTVAAFKSLT-MAES-CLLSLPSLFYAKNNTLSLSIPTKPLNLHLPCSNSSL----- 56
Query: 58 SFKLK-KTTHFSSFTTFVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADET 116
F L KTT SS TFVAQTSDWA +E EEE +WENQG
Sbjct: 57 -FPLTTKTTRHSSLLTFVAQTSDWA-----------------KEEEEEETSWENQGD--- 95
Query: 117 EGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKL 176
+ WG EG E+ EE K+FVGNLP+D+DSE L
Sbjct: 96 ----TAWGTEEGGHEEGGFAEKAEED------------------KIFVGNLPFDIDSENL 133
Query: 177 AMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMST 236
A LF +AGTVE+AE VIYNR TDRSRGFGFVTMST
Sbjct: 134 ASLFGQAGTVEVAE--------------------------VIYNRATDRSRGFGFVTMST 167
Query: 237 VEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV---FEPGFRIYVGNLPWEVDN 293
+EE +KAVEMF Y+++GR+LTVNKAAP+G QPER PR F G R+YVGNLPWEVD+
Sbjct: 168 LEELKKAVEMFSGYELNGRVLTVNKAAPKGAQPERPPRPPRSFSSGLRVYVGNLPWEVDD 227
Query: 294 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 342
ARLEQ+FSEHGKV +ARVVYDRETGRSRGFGFVTMSSET++NDAIAALD
Sbjct: 228 ARLEQIFSEHGKVEDARVVYDRETGRSRGFGFVTMSSETDMNDAIAALD 276
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+I+VGNLP+++D+ L +F + G V A V+Y+R T RSRGFGFVTMS+ EL A+
Sbjct: 118 KIFVGNLPFDIDSENLASLFGQAGTVEVAEVIYNRATDRSRGFGFVTMSTLEELKKAVEM 177
Query: 341 LDGQNLDGRAIRVNVA 356
G L+GR + VN A
Sbjct: 178 FSGYELNGRVLTVNKA 193
>gi|357148860|ref|XP_003574918.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 286
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/207 (62%), Positives = 160/207 (77%), Gaps = 26/207 (12%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
PPE+AK++VGNLPYDVDSE+LA LF++AG VE+AEV
Sbjct: 104 PPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEV------------------------ 139
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV 275
IYNRE+ +SRGFGFVTMST+EEA+KA+EMF+RYDI GRLL VN+AA RG++ ER PR
Sbjct: 140 --IYNRESGQSRGFGFVTMSTIEEADKAIEMFNRYDISGRLLNVNRAAQRGSRVERPPRQ 197
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
F FR YVGNLPW+ +++RL Q+FSEHG+V+NA VVYDRETGRSRGFGFVTM+S+ EL+
Sbjct: 198 FASAFRAYVGNLPWQAEDSRLVQLFSEHGEVLNATVVYDRETGRSRGFGFVTMASKEELD 257
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRR 362
DAI+ALDGQ LDGR +RVNVA +R +R
Sbjct: 258 DAISALDGQELDGRPLRVNVAAERPQR 284
>gi|212274649|ref|NP_001130287.1| uncharacterized protein LOC100191381 [Zea mays]
gi|194688754|gb|ACF78461.1| unknown [Zea mays]
gi|414870130|tpg|DAA48687.1| TPA: ribonucleoprotein [Zea mays]
Length = 289
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 138/243 (56%), Positives = 168/243 (69%), Gaps = 47/243 (19%)
Query: 120 LSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAML 179
L+ E EGE VEPPE+AK++VGNLPYD++SE LA L
Sbjct: 92 LASGDEGEGEYAA---------------------VEPPEEAKVYVGNLPYDIESEGLAQL 130
Query: 180 FEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEE 239
F++AG VE+AE VIYN+ET +SRGFGFVTMST+EE
Sbjct: 131 FDQAGVVEVAE--------------------------VIYNKETGQSRGFGFVTMSTIEE 164
Query: 240 AEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 299
A+KA+EMF+RYDI GRLL VN+A+PRGT+ ER PR F P FR YVGNLPW+ D++RL Q+
Sbjct: 165 ADKAIEMFNRYDISGRLLNVNRASPRGTRMERPPRQFAPAFRAYVGNLPWQADDSRLVQL 224
Query: 300 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
FSE+G+VVNA VVYDRETGRSRGFGFVTM S+ EL+DAI+ALDGQ LDGR +RVNVA +R
Sbjct: 225 FSEYGEVVNAAVVYDRETGRSRGFGFVTMVSKEELDDAISALDGQELDGRPLRVNVAAER 284
Query: 360 QRR 362
+R
Sbjct: 285 PQR 287
>gi|297608990|ref|NP_001062481.2| Os08g0557100 [Oryza sativa Japonica Group]
gi|255678651|dbj|BAF24395.2| Os08g0557100, partial [Oryza sativa Japonica Group]
Length = 194
Score = 265 bits (676), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 158/203 (77%), Gaps = 26/203 (12%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
AK++VGNLPYDVDSE LA LFE+AG VE+AEV IY
Sbjct: 16 AKVYVGNLPYDVDSEGLAQLFEQAGVVEVAEV--------------------------IY 49
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
NRET +SRGFGFVTMST+EEA+KA+EM +RYDI+GRLL VN+AAPRG++ ER PR F P
Sbjct: 50 NRETGQSRGFGFVTMSTIEEADKAIEMLNRYDINGRLLNVNRAAPRGSRVERPPRQFAPA 109
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR YVGNLPW+VD++RL Q+FSEHG+VVNA VVYDRE+GRSRGFGFV+M+S+ EL+DAI+
Sbjct: 110 FRAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAIS 169
Query: 340 ALDGQNLDGRAIRVNVAEDRQRR 362
ALDGQ LDGR +RVNVA +R +R
Sbjct: 170 ALDGQELDGRPLRVNVAAERPQR 192
>gi|42407939|dbj|BAD09078.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|125604308|gb|EAZ43633.1| hypothetical protein OsJ_28256 [Oryza sativa Japonica Group]
gi|215697914|dbj|BAG92121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 305
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 130/202 (64%), Positives = 157/202 (77%), Gaps = 26/202 (12%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K++VGNLPYDVDSE LA LFE+AG VE+AEV IYN
Sbjct: 128 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEV--------------------------IYN 161
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF 280
RET +SRGFGFVTMST+EEA+KA+EM +RYDI+GRLL VN+AAPRG++ ER PR F P F
Sbjct: 162 RETGQSRGFGFVTMSTIEEADKAIEMLNRYDINGRLLNVNRAAPRGSRVERPPRQFAPAF 221
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R YVGNLPW+VD++RL Q+FSEHG+VVNA VVYDRE+GRSRGFGFV+M+S+ EL+DAI+A
Sbjct: 222 RAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISA 281
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
LDGQ LDGR +RVNVA +R +R
Sbjct: 282 LDGQELDGRPLRVNVAAERPQR 303
>gi|125562527|gb|EAZ07975.1| hypothetical protein OsI_30233 [Oryza sativa Indica Group]
Length = 306
Score = 264 bits (675), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 130/202 (64%), Positives = 157/202 (77%), Gaps = 26/202 (12%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K++VGNLPYDVDSE LA LFE+AG VE+AEV IYN
Sbjct: 129 KVYVGNLPYDVDSEGLAQLFEQAGVVEVAEV--------------------------IYN 162
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF 280
RET +SRGFGFVTMST+EEA+KA+EM +RYDI+GRLL VN+AAPRG++ ER PR F P F
Sbjct: 163 RETGQSRGFGFVTMSTIEEADKAIEMLNRYDINGRLLNVNRAAPRGSRVERPPRQFAPAF 222
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R YVGNLPW+VD++RL Q+FSEHG+VVNA VVYDRE+GRSRGFGFV+M+S+ EL+DAI+A
Sbjct: 223 RAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISA 282
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
LDGQ LDGR +RVNVA +R +R
Sbjct: 283 LDGQELDGRPLRVNVAAERPQR 304
>gi|195624584|gb|ACG34122.1| ribonucleoprotein [Zea mays]
Length = 289
Score = 264 bits (674), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 138/243 (56%), Positives = 168/243 (69%), Gaps = 47/243 (19%)
Query: 120 LSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAML 179
L+ E EGE VEPPE+AK++VGNLPYD++SE LA L
Sbjct: 92 LASGDEGEGEYAA---------------------VEPPEEAKVYVGNLPYDIESEGLAQL 130
Query: 180 FEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEE 239
F++AG VE+AE VIYN+ET +SRGFGFVTMST+EE
Sbjct: 131 FDQAGVVEVAE--------------------------VIYNKETGQSRGFGFVTMSTIEE 164
Query: 240 AEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQV 299
A+KA+EMF+RYDI GRLL VN+A+PRGT+ ER PR F P FR YVGNLPW+ D++RL Q+
Sbjct: 165 ADKAIEMFNRYDISGRLLNVNRASPRGTRMERPPRQFAPAFRAYVGNLPWQADDSRLVQL 224
Query: 300 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
FSE+G+VVNA VVYDRETGRSRGFGFVTM S+ EL+DAI+ALDGQ LDGR +RVNVA +R
Sbjct: 225 FSEYGEVVNAAVVYDRETGRSRGFGFVTMVSKEELDDAISALDGQELDGRPLRVNVAAER 284
Query: 360 QRR 362
+R
Sbjct: 285 PQR 287
>gi|326527719|dbj|BAK08134.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/209 (60%), Positives = 159/209 (76%), Gaps = 26/209 (12%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
EPPE+AK++VGNLPYDVDSE+LA LF++AG VE+AEV
Sbjct: 99 AEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEV---------------------- 136
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAP 273
IYNRE+ +SRGFGFVTMST+EEA+KA+E F+RYDI GRLL VN+AA RG++ ER P
Sbjct: 137 ----IYNRESGQSRGFGFVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPP 192
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
R F FR YVGNLPW+ +++RL Q+FSEHG+VVNA +VYDRETGRSRGFGFVTM+S+ +
Sbjct: 193 RQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKED 252
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
L+ AI+ALDGQ +DGR +RVNVA +R +R
Sbjct: 253 LDSAISALDGQEMDGRPLRVNVAAERPQR 281
>gi|326516784|dbj|BAJ96384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/209 (60%), Positives = 159/209 (76%), Gaps = 26/209 (12%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
EPPE+AK++VGNLPYDVDSE+LA LF++AG VE+AEV
Sbjct: 99 AEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEV---------------------- 136
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAP 273
IYNRE+ +SRGFGFVTMST+EEA+KA+E F+RYDI GRLL VN+AA RG++ ER P
Sbjct: 137 ----IYNRESGQSRGFGFVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPP 192
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
R F FR YVGNLPW+ +++RL Q+FSEHG+VVNA +VYDRETGRSRGFGFVTM+S+ +
Sbjct: 193 RRFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKED 252
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
L+ AI+ALDGQ +DGR +RVNVA +R +R
Sbjct: 253 LDSAISALDGQEMDGRPLRVNVAAERPQR 281
>gi|475720|gb|AAA18380.1| RNA-binding protein 3 [Arabidopsis thaliana]
Length = 162
Score = 261 bits (668), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 132/188 (70%), Positives = 150/188 (79%), Gaps = 26/188 (13%)
Query: 178 MLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTV 237
MLFE+AGTVEIAE VIYNRETD+SRGFGFVTMS+V
Sbjct: 1 MLFEQAGTVEIAE--------------------------VIYNRETDQSRGFGFVTMSSV 34
Query: 238 EEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLE 297
+EAE AVE F+RYD++GRLLTVNKAAPRG++PERAPRV+EP FR+YVGNLPW+VDN RLE
Sbjct: 35 DEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLE 94
Query: 298 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
Q+FSEHGKVV ARVVYDRETGRSRGFGFVTMS ELN+AI+ALDGQNL+GRAIRVNVAE
Sbjct: 95 QLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAE 154
Query: 358 DRQRRSSF 365
+R R +
Sbjct: 155 ERPPRRGY 162
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 32/114 (28%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+++VGNLP+DVD+ +L LF + G V A +V+Y+
Sbjct: 78 RVYVGNLPWDVDNGRLEQLFSEHGKVVEA--------------------------RVVYD 111
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
RET RSRGFGFVTMS V+E +A+ +++GR + VN A ER PR
Sbjct: 112 RETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAE------ERPPR 159
>gi|3550483|emb|CAA11893.1| cp31BHv [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/209 (59%), Positives = 159/209 (76%), Gaps = 26/209 (12%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
EPPE+AK++VGNLPYDVDSE+LA LF++AG VE+AEV
Sbjct: 99 AEPPEEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEV---------------------- 136
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAP 273
IYN+E+ +SRGFGFVTMST+EEA+KA+E F+RY+I GRLL VN+AA RG++ ER P
Sbjct: 137 ----IYNKESGQSRGFGFVTMSTIEEADKAIETFNRYNISGRLLNVNRAAQRGSRVERPP 192
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
R F FR YVGNLPW+ +++RL Q+FSEHG+VVNA +VYDRETGRSRGFGFVTM+S+ +
Sbjct: 193 RQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATIVYDRETGRSRGFGFVTMASKED 252
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
L+ AI+ALDGQ +DGR +RVNVA +R +R
Sbjct: 253 LDSAISALDGQEMDGRPLRVNVAAERPQR 281
>gi|219885617|gb|ACL53183.1| unknown [Zea mays]
Length = 275
Score = 256 bits (655), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 142/240 (59%), Positives = 170/240 (70%), Gaps = 40/240 (16%)
Query: 109 ENQGADETEGNLSDWGEPEGEDTVVEAGERQE--ESGEEGVFEEEEF--VEPPEDAKLFV 164
E + ADE E E GE +EAGE +E SG EG E ++ VEPPE+AK++V
Sbjct: 63 EAKSADEEE-------EKAGEPVEMEAGEFEEVLASGGEG---EGQYAAVEPPEEAKVYV 112
Query: 165 GNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETD 224
GNLPYDVDSE LA +F++AG VE+AEV IYNRET
Sbjct: 113 GNLPYDVDSEGLAQIFDQAGVVEVAEV--------------------------IYNRETG 146
Query: 225 RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYV 284
+SRGFGFVTMSTVEEA+KA+EMF RYDI GRLL VN+A+ RGT+ ER R F P FR YV
Sbjct: 147 QSRGFGFVTMSTVEEADKAIEMFSRYDISGRLLNVNRASSRGTRMERPQRQFAPAFRAYV 206
Query: 285 GNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 344
GNLPW+VD++RL Q+FSEHG+VV+A+VVYDRETGRSRGFGFV+M S+ ELNDAI+ALDGQ
Sbjct: 207 GNLPWQVDDSRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKEELNDAISALDGQ 266
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 55/82 (67%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNLP++VD+ L Q+F + G V A V+Y+RETG+SRGFGFVTMS+ E + AI
Sbjct: 109 KVYVGNLPYDVDSEGLAQIFDQAGVVEVAEVIYNRETGQSRGFGFVTMSTVEEADKAIEM 168
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
++ GR + VN A R R
Sbjct: 169 FSRYDISGRLLNVNRASSRGTR 190
>gi|226533870|gb|ACO71288.1| cp31BHv [Triticum aestivum]
Length = 170
Score = 244 bits (623), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/196 (61%), Positives = 149/196 (76%), Gaps = 26/196 (13%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E+AK++VGNLPYDVDSE+LA LF++AG VE+AEV
Sbjct: 1 EEAKVYVGNLPYDVDSERLAQLFDQAGVVEVAEV-------------------------- 34
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
IYNRE+ +SRGFGFVTMST+EEA+KA+E F+RYDI GRLL VN+AA RG++ ER PR F
Sbjct: 35 IYNRESGQSRGFGFVTMSTIEEADKAIETFNRYDISGRLLNVNRAAQRGSRVERPPRQFA 94
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
FR YVGNLPW+ +++RL Q+FSEHG+VVNA VVYDRETGRSRGFGFVTM+S+ +L+ A
Sbjct: 95 SSFRAYVGNLPWQAEDSRLVQLFSEHGEVVNATVVYDRETGRSRGFGFVTMASKEDLDSA 154
Query: 338 IAALDGQNLDGRAIRV 353
I+ALDGQ +DGR +RV
Sbjct: 155 ISALDGQEMDGRPLRV 170
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 57/82 (69%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNLP++VD+ RL Q+F + G V A V+Y+RE+G+SRGFGFVTMS+ E + AI
Sbjct: 4 KVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRESGQSRGFGFVTMSTIEEADKAIET 63
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
+ ++ GR + VN A R R
Sbjct: 64 FNRYDISGRLLNVNRAAQRGSR 85
>gi|116787606|gb|ABK24573.1| unknown [Picea sitchensis]
Length = 290
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 154/212 (72%), Gaps = 26/212 (12%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAV 209
E EFVE PE KLFVGNLP+++D+++L LFE AG E+ +V
Sbjct: 103 ENEFVELPEGTKLFVGNLPFNLDNQQLGELFEGAG--EVLDV------------------ 142
Query: 210 FYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
+I +RET SRGFGFVTM TVEEAEK VE+F+R+ ++GRLLTVNKAAPRGT+
Sbjct: 143 ------NIITDRETGNSRGFGFVTMGTVEEAEKGVELFNRHSLEGRLLTVNKAAPRGTKV 196
Query: 270 ERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
ER + +IYVGNLPW+ D+ L Q+FSEHGKV+ ARVVYDRETGRSRGFGFVT S
Sbjct: 197 ERPSQAGSSTNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYS 256
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
SE+E+NDAIAALDG ++DGR +RVN+AEDR+R
Sbjct: 257 SESEVNDAIAALDGTDMDGRPLRVNIAEDRRR 288
>gi|116788830|gb|ABK25016.1| unknown [Picea sitchensis]
Length = 290
Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/212 (58%), Positives = 154/212 (72%), Gaps = 26/212 (12%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAV 209
E EFVE PE KLFVGNLP+++D+++L LFE AG E+ +V
Sbjct: 103 ENEFVELPEWTKLFVGNLPFNLDNQQLGELFEGAG--EVLDV------------------ 142
Query: 210 FYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
+I +RET SRGFGFVTM TVEEAEK VE+F+R+ ++GRLLTVNKAAPRGT+
Sbjct: 143 ------NIITDRETGNSRGFGFVTMGTVEEAEKGVELFNRHSLEGRLLTVNKAAPRGTKV 196
Query: 270 ERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
ER + +IYVGNLPW+ D+ L Q+FSEHGKV+ ARVVYDRETGRSRGFGFVT S
Sbjct: 197 ERPSQAGSSTNKIYVGNLPWQADDNSLLQLFSEHGKVLEARVVYDRETGRSRGFGFVTYS 256
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
SE+E+NDAIAALDG ++DGR +RVN+AEDR+R
Sbjct: 257 SESEVNDAIAALDGTDMDGRPLRVNIAEDRRR 288
>gi|255556984|ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223541388|gb|EEF42939.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 280
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 136/215 (63%), Gaps = 36/215 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+D KLFVGNLP++VDS +LA LFE AG VE+ EV
Sbjct: 90 QDLKLFVGNLPFNVDSAQLAGLFESAGNVEMVEV-------------------------- 123
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRV 275
IY++ T RSRGFGFVTMS+++E E A + F+ Y+++GR L VN P R + R+PR
Sbjct: 124 IYDKVTGRSRGFGFVTMSSIDEVEAAAQQFNGYELEGRALRVNSGPPPQRESSFSRSPRF 183
Query: 276 FEP--------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
G R+YVGNL W VDN LE FSE GKVV+A+VVYDRE+GRSRGFGFVT
Sbjct: 184 GGGGGGGESLEGNRLYVGNLSWSVDNLALESFFSEQGKVVDAKVVYDRESGRSRGFGFVT 243
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
SS E+ +AI +L+G LDGRAIRV+VAE R RR
Sbjct: 244 YSSAEEVENAIDSLNGAELDGRAIRVSVAEARPRR 278
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 58/90 (64%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
F +++VGNLP+ VD+A+L +F G V V+YD+ TGRSRGFGFVTMSS E+
Sbjct: 88 FSQDLKLFVGNLPFNVDSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVE 147
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
A +G L+GRA+RVN QR SSF
Sbjct: 148 AAAQQFNGYELEGRALRVNSGPPPQRESSF 177
>gi|224140195|ref|XP_002323470.1| predicted protein [Populus trichocarpa]
gi|222868100|gb|EEF05231.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 138/210 (65%), Gaps = 31/210 (14%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+D KLFVGNLP++VDS +LA LFE AG VE+ EV
Sbjct: 88 QDLKLFVGNLPFNVDSARLAGLFETAGNVEMVEV-------------------------- 121
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPR- 274
IY++ T RSRGFGFVTM+T+EE E A + F+ Y++DGR L VN P + + R PR
Sbjct: 122 IYDKVTGRSRGFGFVTMTTIEEVEAASKQFNGYELDGRTLRVNFGPPPQKESSFSRGPRG 181
Query: 275 --VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
F+ G R+YVGNL W VDN LE +F E G+V++A+VVYDR++GRSRGFGFVT SS
Sbjct: 182 GETFDSGNRVYVGNLSWNVDNLALETLFREKGRVMDAKVVYDRDSGRSRGFGFVTYSSAE 241
Query: 333 ELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
E+++AI +L+G LDGRAIRV+VAE + RR
Sbjct: 242 EVDNAIDSLNGAELDGRAIRVSVAEAKPRR 271
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 57/90 (63%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
F +++VGNLP+ VD+ARL +F G V V+YD+ TGRSRGFGFVTM++ E+
Sbjct: 86 FSQDLKLFVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMTTIEEVE 145
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
A +G LDGR +RVN Q+ SSF
Sbjct: 146 AASKQFNGYELDGRTLRVNFGPPPQKESSF 175
>gi|42407940|dbj|BAD09079.1| nucleic acid-binding protein-like [Oryza sativa Japonica Group]
Length = 131
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/129 (71%), Positives = 114/129 (88%)
Query: 234 MSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDN 293
MST+EEA+KA+EM +RYDI+GRLL VN+AAPRG++ ER PR F P FR YVGNLPW+VD+
Sbjct: 1 MSTIEEADKAIEMLNRYDINGRLLNVNRAAPRGSRVERPPRQFAPAFRAYVGNLPWQVDD 60
Query: 294 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 353
+RL Q+FSEHG+VVNA VVYDRE+GRSRGFGFV+M+S+ EL+DAI+ALDGQ LDGR +RV
Sbjct: 61 SRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLRV 120
Query: 354 NVAEDRQRR 362
NVA +R +R
Sbjct: 121 NVAAERPQR 129
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 29/112 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ +VGNLP+ VD +L LF + G V A V+Y+
Sbjct: 48 RAYVGNLPWQVDDSRLLQLFSEHGEVVNA--------------------------SVVYD 81
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 272
RE+ RSRGFGFV+M++ EE + A+ ++DGR L VN AA R P+R
Sbjct: 82 RESGRSRGFGFVSMASKEELDDAISALDGQELDGRPLRVNVAAER---PQRG 130
>gi|125559266|gb|EAZ04802.1| hypothetical protein OsI_26976 [Oryza sativa Indica Group]
Length = 259
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/211 (51%), Positives = 135/211 (63%), Gaps = 32/211 (15%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
ED K+FVGNLP+ VDS +LA LFE+AG+VE+ EV
Sbjct: 73 EDLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEV-------------------------- 106
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRV 275
+Y+R+T RSRGFGFVTMST EEA AVE F+ Y GR L VN P R R+PR
Sbjct: 107 VYDRQTGRSRGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRG 166
Query: 276 ----FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
F+ ++YVGNL W VDN+ LE +FSE G V++A+V+YDRE+GRSRGFGFVT S
Sbjct: 167 GGSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSA 226
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
E+N+AI+ LDG +LDGR IRV VAE + RR
Sbjct: 227 EEVNNAISNLDGVDLDGRQIRVTVAESKPRR 257
>gi|115473531|ref|NP_001060364.1| Os07g0631900 [Oryza sativa Japonica Group]
gi|22296371|dbj|BAC10140.1| putative 29 kDa ribonucleoprotein A, chloroplast precursor [Oryza
sativa Japonica Group]
gi|113611900|dbj|BAF22278.1| Os07g0631900 [Oryza sativa Japonica Group]
gi|125601192|gb|EAZ40768.1| hypothetical protein OsJ_25244 [Oryza sativa Japonica Group]
Length = 264
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/211 (51%), Positives = 135/211 (63%), Gaps = 32/211 (15%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
ED K+FVGNLP+ VDS +LA LFE+AG+VE+ EV
Sbjct: 78 EDLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEV-------------------------- 111
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRV 275
+Y+R+T RSRGFGFVTMST EEA AVE F+ Y GR L VN P R R+PR
Sbjct: 112 VYDRQTGRSRGFGFVTMSTAEEAGAAVEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRG 171
Query: 276 ----FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
F+ ++YVGNL W VDN+ LE +FSE G V++A+V+YDRE+GRSRGFGFVT S
Sbjct: 172 GGSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSA 231
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
E+N+AI+ LDG +LDGR IRV VAE + RR
Sbjct: 232 EEVNNAISNLDGVDLDGRQIRVTVAESKPRR 262
>gi|414887732|tpg|DAA63746.1| TPA: hypothetical protein ZEAMMB73_977373 [Zea mays]
Length = 267
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/234 (49%), Positives = 143/234 (61%), Gaps = 40/234 (17%)
Query: 141 ESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQ 200
E G EG E++ E ED KLFVGNLP+ VDS +LA LFE+AG+VE+ EV
Sbjct: 60 EYGTEGA--EQQDGEFSEDLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEV--------- 108
Query: 201 GFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN 260
+Y+R T RSRGFGFVTMS+ EEA AVE F+ Y GR L VN
Sbjct: 109 -----------------VYDRMTGRSRGFGFVTMSSAEEAGAAVEQFNGYTFQGRPLRVN 151
Query: 261 KAAP--RGTQPERAPR----------VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVN 308
P R RAPR + G ++YVGNL W VDN+ LE +FSE G+V++
Sbjct: 152 CGPPPPRDGSAPRAPRGGGGGGGGGSFVDSGNKVYVGNLAWGVDNSTLENLFSEQGQVLD 211
Query: 309 ARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
A+V+YDR++GRSRGFGFVT S E+N+AI+ LDG +LDGR IRV VAE + RR
Sbjct: 212 AKVIYDRDSGRSRGFGFVTYGSAEEVNNAISNLDGIDLDGRQIRVTVAESKPRR 265
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 53/89 (59%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
F +++VGNLP+ VD+A+L +F + G V VVYDR TGRSRGFGFVTMSS E
Sbjct: 73 FSEDLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRMTGRSRGFGFVTMSSAEEAG 132
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
A+ +G GR +RVN R S
Sbjct: 133 AAVEQFNGYTFQGRPLRVNCGPPPPRDGS 161
>gi|149392545|gb|ABR26075.1| chloroplast 29 kDa ribonucleoprotein [Oryza sativa Indica Group]
Length = 205
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 135/211 (63%), Gaps = 32/211 (15%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
ED K+FVGNLP+ VDS +LA LFE+AG+VE+ EV
Sbjct: 19 EDLKVFVGNLPFSVDSAQLAGLFEQAGSVEMVEV-------------------------- 52
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRV 275
+Y+R+T RSRGFGFVTMST EEA A+E F+ Y GR L VN P R R+PR
Sbjct: 53 VYDRQTGRSRGFGFVTMSTAEEAGAAIEQFNGYTFQGRPLRVNSGPPPPRDDFAPRSPRG 112
Query: 276 ----FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
F+ ++YVGNL W VDN+ LE +FSE G V++A+V+YDRE+GRSRGFGFVT S
Sbjct: 113 GGSNFDSSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSA 172
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
E+N+AI+ LDG +LDGR IRV VAE + RR
Sbjct: 173 EEVNNAISNLDGVDLDGRQIRVTVAESKPRR 203
>gi|17432522|gb|AAL39067.1|AF389431_1 single-stranded DNA binding protein precursor [Solanum tuberosum]
Length = 289
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/247 (48%), Positives = 145/247 (58%), Gaps = 42/247 (17%)
Query: 133 VEAGERQEESG---EEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIA 189
VEAG+ EE G +EG EE P D K+FVGNLP+ VDS LA LFE+AG VE+
Sbjct: 71 VEAGDDDEEEGGLSDEGASYEERNANP--DLKIFVGNLPFSVDSAALAELFERAGDVEMV 128
Query: 190 EVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHR 249
EV IY++ T RSRGFGFVTMS+ E E A + F+
Sbjct: 129 EV--------------------------IYDKLTGRSRGFGFVTMSSKEAVEAACQQFNG 162
Query: 250 YDIDGRLLTVNK--AAPR---------GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 298
Y+IDGR L VN A P+ Q R + R+YVGNL W VD +LE
Sbjct: 163 YEIDGRALRVNSGPAPPKRENSFGDNSSYQGGRGGGSMDSSNRVYVGNLAWSVDQQQLET 222
Query: 299 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 358
+FSE GKVV+A+VVYDR++GRSRGFGFVT SS E+NDAI +LDG +L GRAIRV+ AE
Sbjct: 223 LFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIESLDGVDLGGRAIRVSPAEA 282
Query: 359 RQRRSSF 365
R R F
Sbjct: 283 RPPRRQF 289
>gi|242035621|ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 137/218 (62%), Gaps = 33/218 (15%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAV 209
EEEF ED ++FVGNLP+ VDS +LA LFE+AG+VE+ EV
Sbjct: 76 EEEF---SEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEV------------------ 114
Query: 210 FYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
IY++ T RSRGFGFVTMS+V+E E AVE F+ Y +DGR L VN P P
Sbjct: 115 --------IYDKLTGRSRGFGFVTMSSVQEVEAAVEQFNGYVLDGRSLRVNSGPPPPRDP 166
Query: 270 --ERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
+R PR R+YVGNL W VDN+ L +FSE G+V+ AR+VYDRE+GRSRGFGFVT
Sbjct: 167 SSQRGPR--GDANRVYVGNLSWGVDNSALANLFSEQGEVLEARIVYDRESGRSRGFGFVT 224
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
S E+ +AI+ LDG +LDGR IRV VAE + R F
Sbjct: 225 YGSAEEVENAISNLDGSDLDGRQIRVTVAESKPPRRQF 262
>gi|413921822|gb|AFW61754.1| hypothetical protein ZEAMMB73_478558 [Zea mays]
Length = 131
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/129 (72%), Positives = 111/129 (86%)
Query: 234 MSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDN 293
MSTVEEA+KA+EMF RYDI GRLL VN+A+ RGT+ ER R F P FR YVGNLPW+VD+
Sbjct: 1 MSTVEEADKAIEMFSRYDISGRLLNVNRASSRGTRMERPQRQFAPAFRAYVGNLPWQVDD 60
Query: 294 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 353
+RL Q+FSEHG+VV+A+VVYDRETGRSRGFGFV+M S+ ELNDAI+ALDGQ LDGR +RV
Sbjct: 61 SRLVQLFSEHGEVVDAKVVYDRETGRSRGFGFVSMVSKEELNDAISALDGQELDGRPLRV 120
Query: 354 NVAEDRQRR 362
NVA +R +R
Sbjct: 121 NVAAERPQR 129
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 56/112 (50%), Gaps = 29/112 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ +VGNLP+ VD +L LF + G E+ + K V+Y+
Sbjct: 48 RAYVGNLPWQVDDSRLVQLFSEHG--EVVDAK------------------------VVYD 81
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 272
RET RSRGFGFV+M + EE A+ ++DGR L VN AA R P+R
Sbjct: 82 RETGRSRGFGFVSMVSKEELNDAISALDGQELDGRPLRVNVAAER---PQRG 130
>gi|357121842|ref|XP_003562626.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 275
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/215 (50%), Positives = 133/215 (61%), Gaps = 37/215 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
ED KLFVGNLP+ VDS +LA LFE+AG+VE+ EV
Sbjct: 82 EDLKLFVGNLPFTVDSAQLAGLFEQAGSVEMVEV-------------------------- 115
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRV 275
+Y+R T RSRGFGFVTMST EE AVE F+ Y GR L VN P R R PR
Sbjct: 116 VYDRMTGRSRGFGFVTMSTAEEVSAAVEQFNGYTFQGRPLRVNSGPPPPRDEFAPRTPRG 175
Query: 276 ---------FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
F+ G ++YVGNL W VDN+ LE +FSE GKV++A+V+YDR++GRSRGFGFV
Sbjct: 176 MGGGGGGGSFDSGNKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFV 235
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
T S E+N+AI+ LDG +LDGR IRV VAE + R
Sbjct: 236 TYGSADEVNNAISNLDGVDLDGRQIRVTVAESKPR 270
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 26/111 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL + VD+ L LF + G V A +VIY+
Sbjct: 190 KLYVGNLSWGVDNSTLENLFSEQGKVLDA--------------------------KVIYD 223
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
R++ RSRGFGFVT + +E A+ D+DGR + V A + +P R
Sbjct: 224 RDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAESKPREPRR 274
>gi|242046410|ref|XP_002461076.1| hypothetical protein SORBIDRAFT_02g040260 [Sorghum bicolor]
gi|241924453|gb|EER97597.1| hypothetical protein SORBIDRAFT_02g040260 [Sorghum bicolor]
Length = 268
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 133/216 (61%), Gaps = 38/216 (17%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
D KLFVGNLP+ VDS +LA LFE+AG+VE+ EV +
Sbjct: 77 DLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEV--------------------------V 110
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPR-- 274
Y+R T RSRGFGFVTMS+ EEA AVE F+ Y GR L VN P R RAPR
Sbjct: 111 YDRMTGRSRGFGFVTMSSAEEAGAAVEQFNGYTFQGRPLRVNCGPPPPRDESAPRAPRGG 170
Query: 275 --------VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
+ ++YVGNL W VDN+ LE +FSE G+V++A+V+YDRE+GRSRGFGFV
Sbjct: 171 GGGGGGGSFVDSANKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRESGRSRGFGFV 230
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
T + E+N+AI+ LDG +LDGR IRV VAE + RR
Sbjct: 231 TYGTAAEVNNAISNLDGIDLDGRQIRVTVAESKPRR 266
>gi|326510421|dbj|BAJ87427.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510771|dbj|BAJ91733.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 133/218 (61%), Gaps = 37/218 (16%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
E ED K+FVGNLP+ VDS +LA LFE+AG+VE+ EV
Sbjct: 82 EYSEDLKVFVGNLPFTVDSAQLAGLFEQAGSVEMVEV----------------------- 118
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERA 272
+Y+R T RSRGFGFVTM +VEE AVE F+ Y GR L VN P R R
Sbjct: 119 ---VYDRMTGRSRGFGFVTMGSVEEVAAAVEQFNGYTFQGRPLRVNSGPPPPRDEFAPRT 175
Query: 273 PRV---------FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGF 323
PR F+ ++YVGNL W VDN+ LE +FSE GKV++A+V+YDR++GRSRGF
Sbjct: 176 PRAMGGGGGGGSFDSANKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGF 235
Query: 324 GFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
GFVT S E+N+AI+ LDG +LDGR IRV VAE + R
Sbjct: 236 GFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAESKPR 273
>gi|1350821|sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP31; Flags: Precursor
gi|19710|emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbaginifolia]
Length = 292
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/243 (46%), Positives = 141/243 (58%), Gaps = 55/243 (22%)
Query: 149 EEEEFVEPP---EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMW 205
++ E E P ED KLFVGNLP+ VDS LA LFE+AG VEI EV
Sbjct: 74 DDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEV-------------- 119
Query: 206 VCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-AP 264
IY++ + RSRGFGFVTMST EE E A + F+ Y+IDGR + VN AP
Sbjct: 120 ------------IYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAP 167
Query: 265 -----------RGTQPE--------------RAPRVFEPGFRIYVGNLPWEVDNARLEQV 299
RG R R + R+YVGNL W VD+ L+++
Sbjct: 168 AKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVDDLALKEL 227
Query: 300 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
FSE G VV+A+VVYDR++GRSRGFGFVT SS E+NDAI +L+G +LDGR+IRV+ AE+R
Sbjct: 228 FSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEER 287
Query: 360 QRR 362
RR
Sbjct: 288 PRR 290
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 273 PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
PR F +++VGNLP+ VD+A L +F G V V+YD+ +GRSRGFGFVTMS++
Sbjct: 82 PR-FSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKE 140
Query: 333 ELNDAIAALDGQNLDGRAIRVNV--AEDRQRRSSF 365
E+ A +G +DGRAIRVN A ++ SSF
Sbjct: 141 EVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSF 175
>gi|12230585|sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
Full=CP29B; Flags: Precursor
gi|14135|emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvestris]
Length = 291
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/250 (46%), Positives = 145/250 (58%), Gaps = 55/250 (22%)
Query: 142 SGEEGVFEEEEFVEPP---EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFG 198
SG + + ++ E E P ED KLFVGNLP+ VDS LA LFE+AG VE+ EV
Sbjct: 66 SGFDQLEDDVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEV------- 118
Query: 199 NQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 258
IY++ T RSRGFGFVTMST EE E A + F+ Y+IDGR +
Sbjct: 119 -------------------IYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIR 159
Query: 259 VNKA-AP-----------RGTQPE--------------RAPRVFEPGFRIYVGNLPWEVD 292
VN AP RG R R + R+YVGNL W VD
Sbjct: 160 VNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVYVGNLSWGVD 219
Query: 293 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 352
+ L+++FSE G VV+A+VVYDR++GRSRGFGFVT SS E+NDAI +L+G +LDGR+IR
Sbjct: 220 DLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIR 279
Query: 353 VNVAEDRQRR 362
V+ AE+R RR
Sbjct: 280 VSAAEERPRR 289
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 273 PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
PR F +++VGNLP+ VD+A L +F G V V+YD+ TGRSRGFGFVTMS++
Sbjct: 81 PR-FSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKE 139
Query: 333 ELNDAIAALDGQNLDGRAIRVNV--AEDRQRRSSF 365
E+ A +G +DGRAIRVN A ++ SSF
Sbjct: 140 EVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSF 174
>gi|238010804|gb|ACR36437.1| unknown [Zea mays]
Length = 262
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 32/212 (15%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
ED ++FVGNLP+ VDS +LA LFE+AG+VE+ EV
Sbjct: 79 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEV-------------------------- 112
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP----RGTQPERAP 273
IY++ T RSRGFGFVTMS+VEE E AV+ F+ Y +DGR L VN P R ++ + P
Sbjct: 113 IYDKLTGRSRGFGFVTMSSVEEVEVAVDQFNGYVLDGRSLRVNSGPPPPRDRSSRSPQRP 172
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
R R+YVGNL W VDN+ L +FSE G+V+ AR++YDRE+GRSRGFGFVT S E
Sbjct: 173 R--GDANRVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEE 230
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
+ +AI+ LDG +LDGR IRV VAE + R +
Sbjct: 231 VENAISNLDGADLDGRQIRVTVAESKPPRQQY 262
>gi|115453241|ref|NP_001050221.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|18921322|gb|AAL82527.1|AC084766_13 putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|108708430|gb|ABF96225.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113548692|dbj|BAF12135.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|125586437|gb|EAZ27101.1| hypothetical protein OsJ_11032 [Oryza sativa Japonica Group]
gi|215697052|dbj|BAG91046.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766568|dbj|BAG98727.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 133/210 (63%), Gaps = 30/210 (14%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+D ++FVGNLP+ VDS +LA LFE+AG+VE+ EV
Sbjct: 84 DDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEV-------------------------- 117
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRV 275
IY++ T RSRGFGFVTMS+VEE E AVE F+ Y +DGR L VN P R +RAPR
Sbjct: 118 IYDKLTGRSRGFGFVTMSSVEEVEAAVEQFNGYILDGRSLRVNSGPPPPREQSSQRAPR- 176
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
R+YVGNL W VDNA L +FS G+V+ A+V+YDRE+GRSRGFGFVT S E+
Sbjct: 177 -GEANRVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEEVE 235
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
+A++ LDG ++DGR IRV VAE + R +
Sbjct: 236 NAVSNLDGADMDGRQIRVTVAESKPPRRQY 265
>gi|225440003|ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
vinifera]
Length = 288
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 111/224 (49%), Positives = 132/224 (58%), Gaps = 46/224 (20%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
D KLFVGNLP++VDS LA LFE+AG VE+ EV I
Sbjct: 89 DLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEV--------------------------I 122
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP---------RGTQP 269
Y++ T RSRGFGFVTMSTVEE E A + F+ Y+++GR L VN P RG
Sbjct: 123 YDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARRENSNFRGENS 182
Query: 270 E--------RAPRV---FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 318
R PR RIYVGNL W VD+ LE +FSE GKV ARV+YDRETG
Sbjct: 183 NFRGENTNFRGPRGGANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETG 242
Query: 319 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
RSRGFGFVT +S E+N AI +LDG +L+GR+IRV +AE R RR
Sbjct: 243 RSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARPRR 286
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 55/87 (63%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
F P +++VGNLP+ VD+A L +F + G V V+YD+ TGRSRGFGFVTMS+ E+
Sbjct: 86 FSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEVE 145
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRR 362
A +G L+GR +RVN RR
Sbjct: 146 AAAQQFNGYELEGRQLRVNSGPPPARR 172
>gi|224069480|ref|XP_002326357.1| predicted protein [Populus trichocarpa]
gi|222833550|gb|EEE72027.1| predicted protein [Populus trichocarpa]
Length = 286
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/236 (45%), Positives = 142/236 (60%), Gaps = 43/236 (18%)
Query: 144 EEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFH 203
EE VF + + D +LFVGNLP++V+S +LA LF+ AG VE+ EVK
Sbjct: 75 EEDVFGDGDEPSFSPDLQLFVGNLPFNVNSAQLADLFKSAGNVEMVEVK----------- 123
Query: 204 MWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA 263
Y++ T RSRGFGFVTMST+EE E A + F+ Y++DGR L VN
Sbjct: 124 ---------------YDKVTGRSRGFGFVTMSTIEEVEAASQQFNGYELDGRPLRVNSGP 168
Query: 264 P--RGTQPERAPR---------------VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 306
P R T R P+ F+ R+YVGNL W VD++ LE +F E GKV
Sbjct: 169 PPQRETSFSRLPQRENSFSRGPGARGGETFDSSNRVYVGNLSWNVDDSALESLFREKGKV 228
Query: 307 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
++A+VVYDR++GRS+GFGFVT SS E+ DA+ +L+G LDGRAIRV+VAE + RR
Sbjct: 229 MDAKVVYDRDSGRSKGFGFVTYSSAEEVEDAVDSLNGAELDGRAIRVSVAEAKPRR 284
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 57/90 (63%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
F P +++VGNLP+ V++A+L +F G V V YD+ TGRSRGFGFVTMS+ E+
Sbjct: 87 FSPDLQLFVGNLPFNVNSAQLADLFKSAGNVEMVEVKYDKVTGRSRGFGFVTMSTIEEVE 146
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
A +G LDGR +RVN QR +SF
Sbjct: 147 AASQQFNGYELDGRPLRVNSGPPPQRETSF 176
>gi|12230584|sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor
gi|19754|emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris]
Length = 273
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 139/236 (58%), Gaps = 44/236 (18%)
Query: 141 ESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQ 200
E G++GV EE F D K+FVGNLP+ DS LA LFE+AG VE+ EV
Sbjct: 71 EDGDDGVEEERNF---SPDLKIFVGNLPFSADSAALAELFERAGNVEMVEV--------- 118
Query: 201 GFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN 260
IY++ T RSRGFGFVTMS+ EE E A + F+ Y++DGR L VN
Sbjct: 119 -----------------IYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVN 161
Query: 261 KAAPRGTQPERAPRVFEPGF-----------RIYVGNLPWEVDNARLEQVFSEHGKVVNA 309
P PE+ G R+YVGNL W VD LE +FSE GKVV+A
Sbjct: 162 SGPP----PEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDA 217
Query: 310 RVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
+VVYDR++GRSRGFGFVT SS E+N+AI +LDG +L+GRAIRV+ AE R R F
Sbjct: 218 KVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 273
>gi|125544079|gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indica Group]
Length = 265
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 132/210 (62%), Gaps = 30/210 (14%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+D ++FVGNLP+ VDS +LA LFE+AG+VE+ EV
Sbjct: 84 DDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEV-------------------------- 117
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRV 275
IY++ T RSRGFGFVTMS+VEE E AVE F+ Y +DGR L VN P R RAPR
Sbjct: 118 IYDKLTGRSRGFGFVTMSSVEEVEAAVEQFNGYILDGRSLRVNSGPPPPREQSSRRAPR- 176
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
R+YVGNL W VDNA L +FS G+V+ A+V+YDRE+GRSRGFGFVT S E+
Sbjct: 177 -GEANRVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEEVE 235
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
+A++ LDG ++DGR IRV VAE + R +
Sbjct: 236 NAVSNLDGADMDGRQIRVTVAESKPPRRQY 265
>gi|1015370|gb|AAA79045.1| 24 kDa RNA binding protein, partial [Spinacia oleracea]
Length = 220
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 141/231 (61%), Gaps = 45/231 (19%)
Query: 148 FEEEEFVEPPEDA----------KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLF 197
FE+EE V +DA K+FVGNLP++VDS +LA LF AGTVE+ EV
Sbjct: 16 FEQEEDVMGDDDAGRQPNFSPDLKIFVGNLPFNVDSAELAGLFGAAGTVEMVEV------ 69
Query: 198 GNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL 257
IY++ T RSRGFGFVTMS+VEE E A + F+ Y++DGR L
Sbjct: 70 --------------------IYDKLTGRSRGFGFVTMSSVEEVEAAAQQFNNYELDGRTL 109
Query: 258 TVNKAAPRGTQPERAPRV------FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARV 311
V + + + PRV F R++VGNL W+VD+ L+ +FSE G VV A+V
Sbjct: 110 RVTEDSHKDMT---LPRVESECDSFGSSNRVHVGNLSWKVDDDALKTLFSETGDVVEAKV 166
Query: 312 VYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
+YDR+TGRSRGFGFVT +S E+N AI +LDG +L+GR+IRV AE RQRR
Sbjct: 167 IYDRDTGRSRGFGFVTYNSANEVNTAIESLDGVDLNGRSIRVTAAEARQRR 217
>gi|226502782|ref|NP_001151728.1| ribonucleoprotein A [Zea mays]
gi|195649373|gb|ACG44154.1| ribonucleoprotein A [Zea mays]
gi|414591006|tpg|DAA41577.1| TPA: ribonucleoprotein A [Zea mays]
Length = 268
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/237 (48%), Positives = 144/237 (60%), Gaps = 43/237 (18%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFL 196
E E+ GE+G EEF ED KLFVGNLP+ VDS +LA LFE+AG+VE+ EV
Sbjct: 62 EGAEQEGEDG---SEEF---SEDLKLFVGNLPFSVDSAQLAGLFEQAGSVEMVEV----- 110
Query: 197 FGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRL 256
+Y+R T RSRGFGFVTMS+ EEAE AVE F+ Y GR
Sbjct: 111 ---------------------VYDRMTGRSRGFGFVTMSSAEEAEAAVEQFNGYAFQGRQ 149
Query: 257 LTVNKAAP--RGTQPERAPR---------VFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 305
L VN P R RAPR + ++YVGNL W VDN+ LE +FSE G+
Sbjct: 150 LRVNCGPPPPRDESTPRAPRGGGGGGGGGFVDSANKVYVGNLAWGVDNSTLENLFSEQGQ 209
Query: 306 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
V++A+V+YDR++GRSRGFGFVT S E+N+AI+ LDG +LDGR IRV AE + RR
Sbjct: 210 VLDAKVIYDRDSGRSRGFGFVTYGSAQEVNNAISNLDGIDLDGRQIRVTAAESKPRR 266
>gi|116786296|gb|ABK24055.1| unknown [Picea sitchensis]
Length = 299
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 136/213 (63%), Gaps = 35/213 (16%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P + K+FVGNLP+ VDS +LA LF+ +G V +++
Sbjct: 109 PSANLKVFVGNLPWSVDSAELAELFKDSGDV--------------------------TMV 142
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA--------APRGT 267
+VIY+R+T RSRGF FVTM+T +A++AVE F+ Y+ GR L VN APRG
Sbjct: 143 EVIYDRQTGRSRGFAFVTMATQADADEAVEKFNGYEYQGRTLRVNSGPPPPKDSFAPRGG 202
Query: 268 -QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
+ E+ + R++VGNLPW D+ LEQ+FS+HGKV+ A+VVYDRETGRSRGFGFV
Sbjct: 203 FRNEKPSGNYNSANRVFVGNLPWGADDLSLEQLFSDHGKVMEAKVVYDRETGRSRGFGFV 262
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
T+SS E+ +AI++LDG ++DGR I+V +AE +
Sbjct: 263 TLSSPQEIEEAISSLDGSDMDGRQIKVTLAETK 295
>gi|356533254|ref|XP_003535181.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 275
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 131/217 (60%), Gaps = 40/217 (18%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
D KLFVGNLP++VDS +LA LFE AG VE+ EV I
Sbjct: 85 DLKLFVGNLPFNVDSAQLAELFESAGNVEVVEV--------------------------I 118
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP 278
Y++ T RSRGFGFVTMS+VEEAE A + F+ Y++DGR L VN P E APR
Sbjct: 119 YDKTTGRSRGFGFVTMSSVEEAEAAAQQFNGYELDGRALRVNSGPPPARN-ESAPRFRGG 177
Query: 279 GF-------------RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 325
R++V NL W VDN L+ +F E G V+ ARV+YDRE+GRSRGFGF
Sbjct: 178 SSFGSRGGGPSDSENRVHVSNLAWGVDNVALKSLFREQGNVLEARVIYDRESGRSRGFGF 237
Query: 326 VTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
VT SS E+N AI +L+G +L+GRAIRV++A+ + ++
Sbjct: 238 VTFSSPDEVNSAIQSLNGVDLNGRAIRVSLADSKPKQ 274
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 54/79 (68%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
F P +++VGNLP+ VD+A+L ++F G V V+YD+ TGRSRGFGFVTMSS E
Sbjct: 82 FSPDLKLFVGNLPFNVDSAQLAELFESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAE 141
Query: 336 DAIAALDGQNLDGRAIRVN 354
A +G LDGRA+RVN
Sbjct: 142 AAAQQFNGYELDGRALRVN 160
>gi|15228102|ref|NP_181259.1| ribonucleoprotein [Arabidopsis thaliana]
gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName: Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
Precursor
gi|13877809|gb|AAK43982.1|AF370167_1 putative RNA-binding protein [Arabidopsis thaliana]
gi|4056477|gb|AAC98043.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|15081717|gb|AAK82513.1| At2g37220/F3G5.1 [Arabidopsis thaliana]
gi|16323482|gb|AAL15235.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|20197716|gb|AAM15222.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330254275|gb|AEC09369.1| ribonucleoprotein [Arabidopsis thaliana]
Length = 289
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/244 (45%), Positives = 138/244 (56%), Gaps = 53/244 (21%)
Query: 149 EEEEF--VEPPE------DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQ 200
EE+ F V PP+ D KLFVGNLP++VDS +LA LFE AG VE+ EV
Sbjct: 72 EEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEV--------- 122
Query: 201 GFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN 260
IY++ T RSRGFGFVTMS+V E E A + F+ Y++DGR L VN
Sbjct: 123 -----------------IYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVN 165
Query: 261 KAAPRGTQPE---RAPRVFEPGF----------------RIYVGNLPWEVDNARLEQVFS 301
P + + R PR R+YVGNL W VD+ LE +FS
Sbjct: 166 AGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFS 225
Query: 302 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
E GKVV ARV+YDR++GRS+GFGFVT S E+ +AI +LDG +LDGR IRV+ AE R
Sbjct: 226 EQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPP 285
Query: 362 RSSF 365
R +
Sbjct: 286 RRQY 289
>gi|21617920|gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/244 (45%), Positives = 137/244 (56%), Gaps = 53/244 (21%)
Query: 149 EEEEF--VEPPE------DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQ 200
EE+ F V PP+ D KLFVGNLP++VDS +LA LFE AG VE+ EV
Sbjct: 72 EEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEV--------- 122
Query: 201 GFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN 260
IY++ T RSRGFGFVTMS+V E E A + F+ Y++DGR L VN
Sbjct: 123 -----------------IYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVN 165
Query: 261 KAAP---RGTQPERAPRVFEPGF----------------RIYVGNLPWEVDNARLEQVFS 301
P R R PR R+YVGNL W VD+ LE +FS
Sbjct: 166 AGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFS 225
Query: 302 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
E GKVV ARV+YDR++GRS+GFGFVT S E+ +AI +LDG +LDGR IRV+ AE R
Sbjct: 226 EQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPP 285
Query: 362 RSSF 365
R +
Sbjct: 286 RRQY 289
>gi|116793682|gb|ABK26841.1| unknown [Picea sitchensis]
Length = 347
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 140/232 (60%), Gaps = 36/232 (15%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFL 196
E E E+ E +++ PE KL+VGNLP+D+DSE LA +F+++G VE+ EV
Sbjct: 136 EEPESKPEQESVEGQDYPPLPEGTKLYVGNLPFDIDSEGLAKMFDESGVVEMVEV----- 190
Query: 197 FGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRL 256
IY+R + RSRGF FVTMSTVEEAE A++ F+ ++IDGR
Sbjct: 191 ---------------------IYDRSSGRSRGFAFVTMSTVEEAEAAIKKFNGFEIDGRS 229
Query: 257 LTVN-KAAPR---GTQPERAPRVFEPGF-----RIYVGNLPWEVDNARLEQVFSEHGKVV 307
L VN PR G P R+P F GF ++YVGNL W V + L + + G V+
Sbjct: 230 LRVNFPEVPRLQNGRSPARSPSNFG-GFVDSPHKVYVGNLAWSVTSETLREALNGKGNVL 288
Query: 308 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
A+V+ DRETGRSRGFGFV+ SSE E+ A++ +DG ++GR+IRVNVA+ R
Sbjct: 289 GAKVIQDRETGRSRGFGFVSFSSEAEVEAAVSEMDGLEVEGRSIRVNVAKSR 340
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 28/116 (24%)
Query: 153 FVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYV 212
FV+ P K++VGNL + V SE L G V A
Sbjct: 256 FVDSPH--KVYVGNLAWSVTSETLREALNGKGNVLGA----------------------- 290
Query: 213 SLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ 268
+VI +RET RSRGFGFV+ S+ E E AV +++GR + VN A R T+
Sbjct: 291 ---KVIQDRETGRSRGFGFVSFSSEAEVEAAVSEMDGLEVEGRSIRVNVAKSRSTE 343
>gi|116781814|gb|ABK22250.1| unknown [Picea sitchensis]
Length = 355
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/232 (44%), Positives = 140/232 (60%), Gaps = 36/232 (15%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFL 196
E E E+ E +++ PE KL+VGNLP+D+DSE LA +F+++G VE+ EV
Sbjct: 144 EEPESKPEQESVEGQDYPPLPEGTKLYVGNLPFDIDSEGLAKMFDESGVVEMVEV----- 198
Query: 197 FGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRL 256
IY+R + RSRGF FVTMSTVEEAE A++ F+ ++IDGR
Sbjct: 199 ---------------------IYDRSSGRSRGFAFVTMSTVEEAEAAIKKFNGFEIDGRS 237
Query: 257 LTVN-KAAPR---GTQPERAPRVFEPGF-----RIYVGNLPWEVDNARLEQVFSEHGKVV 307
L VN PR G P R+P F GF ++YVGNL W V + L + + G V+
Sbjct: 238 LRVNFPEVPRLQNGRSPARSPSNFG-GFVDSPHKVYVGNLAWSVTSETLREALNGKGNVL 296
Query: 308 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
A+V+ DRETGRSRGFGFV+ SSE E+ A++ +DG ++GR+IRVNVA+ R
Sbjct: 297 GAKVIQDRETGRSRGFGFVSFSSEAEVEAAVSEMDGLEVEGRSIRVNVAKSR 348
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 53/116 (45%), Gaps = 28/116 (24%)
Query: 153 FVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYV 212
FV+ P K++VGNL + V SE L G V A
Sbjct: 264 FVDSPH--KVYVGNLAWSVTSETLREALNGKGNVLGA----------------------- 298
Query: 213 SLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ 268
+VI +RET RSRGFGFV+ S+ E E AV +++GR + VN A R T+
Sbjct: 299 ---KVIQDRETGRSRGFGFVSFSSEAEVEAAVSEMDGLEVEGRSIRVNVAKSRSTE 351
>gi|226492142|ref|NP_001148607.1| ribonucleoprotein A precursor [Zea mays]
gi|195620768|gb|ACG32214.1| ribonucleoprotein A [Zea mays]
Length = 264
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 130/221 (58%), Gaps = 50/221 (22%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+D ++FVGNLP+ VDS +LA LFE+AG+VE+ EV
Sbjct: 81 DDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEV-------------------------- 114
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA-------------P 264
IY++ T RSRGFGFVTMS+VEE E AV+ F+ Y +DGR L VN P
Sbjct: 115 IYDKLTGRSRGFGFVTMSSVEEVEVAVDQFNGYVLDGRSLRVNSGPPPPRDRSSPSPQRP 174
Query: 265 RGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFG 324
RG R+YVGNL W VDN+ L +FSE G+V+ AR++YDRE+GRSRGFG
Sbjct: 175 RGDAN-----------RVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFG 223
Query: 325 FVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
FVT S E+ +AI+ LDG +LDGR IRV VAE + R +
Sbjct: 224 FVTYGSAEEVENAISNLDGADLDGRQIRVTVAESKPPRQQY 264
>gi|414866997|tpg|DAA45554.1| TPA: ribonucleoprotein A [Zea mays]
Length = 262
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 130/221 (58%), Gaps = 50/221 (22%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+D ++FVGNLP+ VDS +LA LFE+AG+VE+ EV
Sbjct: 79 DDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEV-------------------------- 112
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA-------------P 264
IY++ T RSRGFGFVTMS+VEE E AV+ F+ Y +DGR L VN P
Sbjct: 113 IYDKLTGRSRGFGFVTMSSVEEVEVAVDQFNGYVLDGRSLRVNSGPPPPRDRSSPSPQRP 172
Query: 265 RGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFG 324
RG R+YVGNL W VDN+ L +FSE G+V+ AR++YDRE+GRSRGFG
Sbjct: 173 RGDAN-----------RVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFG 221
Query: 325 FVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
FVT S E+ +AI+ LDG +LDGR IRV VAE + R +
Sbjct: 222 FVTYGSAEEVENAISNLDGADLDGRQIRVTVAESKPPRQQY 262
>gi|359806184|ref|NP_001240946.1| uncharacterized protein LOC100812934 [Glycine max]
gi|255639723|gb|ACU20155.1| unknown [Glycine max]
Length = 279
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 130/218 (59%), Gaps = 41/218 (18%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
D KLFVGNLP+ VDS +LA LFE AG VE+ EV I
Sbjct: 88 DLKLFVGNLPFSVDSARLAELFESAGNVEVVEV--------------------------I 121
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP 278
Y++ T RSRGFGFVTMS+VEEAE A + F+ Y++DGR L VN P E APR
Sbjct: 122 YDKTTGRSRGFGFVTMSSVEEAEAAAKQFNGYELDGRSLRVNSGPPPARN-ESAPRFRGG 180
Query: 279 GF-------------RIYVGNLPWEVDNARLEQVFSEHGK-VVNARVVYDRETGRSRGFG 324
R++VGNL W VD+ LE +F E GK V+ ARV+YDRE+GRSRGFG
Sbjct: 181 SSFGSRGGGPSDSENRVHVGNLAWGVDDVALESLFREQGKKVLEARVIYDRESGRSRGFG 240
Query: 325 FVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
FVT S E+ AI +LDG +L+GRAIRV++A+ + +R
Sbjct: 241 FVTFGSPDEVKSAIQSLDGVDLNGRAIRVSLADSKPKR 278
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 53/79 (67%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
F +++VGNLP+ VD+ARL ++F G V V+YD+ TGRSRGFGFVTMSS E
Sbjct: 85 FSRDLKLFVGNLPFSVDSARLAELFESAGNVEVVEVIYDKTTGRSRGFGFVTMSSVEEAE 144
Query: 336 DAIAALDGQNLDGRAIRVN 354
A +G LDGR++RVN
Sbjct: 145 AAAKQFNGYELDGRSLRVN 163
>gi|297827229|ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata]
gi|297327336|gb|EFH57756.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata]
Length = 289
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/226 (45%), Positives = 130/226 (57%), Gaps = 45/226 (19%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
D KLFVGNLP++VDS +LA LFE AG VE+ EV I
Sbjct: 90 DLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEV--------------------------I 123
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE---RAPRV 275
Y++ T RSRGFGFVTMS+V E E A F+ Y++DGR L VN P + + R PR
Sbjct: 124 YDKVTGRSRGFGFVTMSSVSEVEAAANQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRS 183
Query: 276 FEPGF----------------RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGR 319
R+YVGNL W VD+ LE +F+E GKVV ARV+YDR++GR
Sbjct: 184 SFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFAEQGKVVEARVIYDRDSGR 243
Query: 320 SRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
S+GFGFVT +S E+ +AI +L+G +LDGR IRV+ AE R R F
Sbjct: 244 SKGFGFVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEARPPRRQF 289
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 56/87 (64%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
F +++VGNLP+ VD+A+L Q+F G V V+YD+ TGRSRGFGFVTMSS +E+
Sbjct: 87 FSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSVSEVE 146
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRR 362
A +G LDGR +RVN +R
Sbjct: 147 AAANQFNGYELDGRPLRVNAGPPPPKR 173
>gi|217072826|gb|ACJ84773.1| unknown [Medicago truncatula]
Length = 232
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/184 (54%), Positives = 113/184 (61%), Gaps = 38/184 (20%)
Query: 114 DETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDS 173
DE G DW EP + E G G FVEPPEDAKLFVGN P+DVDS
Sbjct: 72 DEEAGLSLDW-EPTADAAETETGADDSAEGY--------FVEPPEDAKLFVGNFPFDVDS 122
Query: 174 EKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVT 233
EKLAMLF +AGTVEIAEV IYNR+TD SRGFGFVT
Sbjct: 123 EKLAMLFGQAGTVEIAEV--------------------------IYNRQTDLSRGFGFVT 156
Query: 234 MSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP---ERAPRVFEPGFRIYVGNLPWE 290
M+TVEEAE AVE F+ YD +GR L VNKA+P+G++P ERAPR FEP RIYV NL WE
Sbjct: 157 MNTVEEAESAVEKFNGYDYNGRSLVVNKASPKGSRPERTERAPRTFEPVLRIYVANLAWE 216
Query: 291 VDNA 294
VDN+
Sbjct: 217 VDNS 220
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 54/82 (65%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VGN P++VD+ +L +F + G V A V+Y+R+T SRGFGFVTM++ E A+
Sbjct: 110 KLFVGNFPFDVDSEKLAMLFGQAGTVEIAEVIYNRQTDLSRGFGFVTMNTVEEAESAVEK 169
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
+G + +GR++ VN A + R
Sbjct: 170 FNGYDYNGRSLVVNKASPKGSR 191
>gi|449440111|ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449483348|ref|XP_004156563.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 278
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 128/216 (59%), Gaps = 38/216 (17%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
D KLFVGNLP+ VDS +LA LFE AG VE EV I
Sbjct: 92 DLKLFVGNLPFTVDSAQLAGLFESAGQVERVEV--------------------------I 125
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP---------RGTQP 269
Y++ T RSRGFGFVTMSTV E E A + F+ Y++DGRLL VN P RG+
Sbjct: 126 YDKTTGRSRGFGFVTMSTVGEVEAAAQQFNGYELDGRLLRVNYGPPPPKRDDSSFRGS-- 183
Query: 270 ERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
R F+ R++V NL W VD+ LE +F E G V+ A+VVYDR++G+SRGFGFVT +
Sbjct: 184 -RNASRFDNRNRVHVSNLAWGVDDLTLENLFREKGNVLEAKVVYDRDSGKSRGFGFVTYN 242
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
S E+N+AI +LDG +LDGR IRV AE R R F
Sbjct: 243 SAEEVNEAIQSLDGVDLDGRPIRVTQAEARPPRRQF 278
>gi|1350820|sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor
gi|19708|emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/220 (47%), Positives = 130/220 (59%), Gaps = 39/220 (17%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
D K+FVGNL + DS LA LFE+AG VE+ EV I
Sbjct: 86 DLKIFVGNLLFSADSAALAELFERAGNVEMVEV--------------------------I 119
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR---- 274
Y++ T RSRGFGFVTMS+ EE E A + F+ Y++DGR L VN P + + R
Sbjct: 120 YDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSS 179
Query: 275 ---------VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 325
F+ R+YVGNL W VD LE +FSE GKVV+A+VVYDR++GRSRGFGF
Sbjct: 180 FRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGF 239
Query: 326 VTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
VT SS E+N+AI +LDG +L+GRAIRV+ AE R R F
Sbjct: 240 VTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 279
>gi|357112177|ref|XP_003557886.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like
[Brachypodium distachyon]
Length = 272
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/233 (46%), Positives = 138/233 (59%), Gaps = 44/233 (18%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAV 209
EE E ED ++FVGNLP+ VDS +LA LFE+AG+VE+ EV
Sbjct: 67 EESAGEFSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEV------------------ 108
Query: 210 FYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
IY++ T RSRGFGFVTMSTVEE E+AVE + Y +DGR + VN P +
Sbjct: 109 --------IYDKLTGRSRGFGFVTMSTVEEVEEAVEQLNGYVLDGRTIKVNSGPPP-PRD 159
Query: 270 ERAPRVFE----PGFR-------------IYVGNLPWEVDNARLEQVFSEHGKVVNARVV 312
+ +PR F GFR +YVGNL W VD++ L +F+E G V+ ARV+
Sbjct: 160 QSSPRGFREQSSGGFRQQSSRGPSGGDNRVYVGNLSWNVDDSALANLFNEQGSVLGARVI 219
Query: 313 YDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
YDRE+GRSRGFGFVT S E+ A++ LDG +LDGR IRV VAE RQ R +
Sbjct: 220 YDRESGRSRGFGFVTYGSSEEVEKAVSNLDGTDLDGRQIRVTVAEARQPRREY 272
>gi|326503656|dbj|BAJ86334.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 135/224 (60%), Gaps = 43/224 (19%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
ED ++FVGNLP+ VDS +LA LFE+AG+VE+ EV
Sbjct: 72 EDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEV-------------------------- 105
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
IY++ T RSRGFGFVTMSTVEE E+AVE + Y +DGR L VN P + + +PR F
Sbjct: 106 IYDKLTGRSRGFGFVTMSTVEEVEEAVERLNGYVLDGRALKVNSGPPP-PKDQSSPRGFR 164
Query: 278 ---PGFR-------------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSR 321
GFR +YVGNL W VD++ L +F+E G V+ ARV+YDRE+GRSR
Sbjct: 165 EQSGGFRQQSSRGPSGGDNRVYVGNLSWNVDDSALANLFNEQGSVLGARVIYDRESGRSR 224
Query: 322 GFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
GFGFVT + E+ A++ LDG ++DGR IRV VAE RQ R +
Sbjct: 225 GFGFVTYGTSDEVQKAVSNLDGTDMDGRQIRVTVAEARQPRREY 268
>gi|168029395|ref|XP_001767211.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681466|gb|EDQ67892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 192
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 130/212 (61%), Gaps = 39/212 (18%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL++GNLP+ DS +LA + ++ G+VE L++VIY+
Sbjct: 1 KLYIGNLPWQCDSAQLAGICQEFGSVE--------------------------LVEVIYD 34
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN--------KAAPRGTQPERA 272
+E+ RSRGF FVTM+T E+AE +E +D+ GR L V+ + PRG +R+
Sbjct: 35 QESGRSRGFAFVTMATQEDAENVIERLDGHDVGGRPLKVSFPQSKQNRPSFPRGEGYQRS 94
Query: 273 PRVFEPGFR-----IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
R P R ++VGNL W VDN L+++FS++GKVV+ARVVYDRE+GRSRGFGFVT
Sbjct: 95 ERAPRPAARDDPNKVFVGNLSWGVDNGALQELFSDYGKVVDARVVYDRESGRSRGFGFVT 154
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
S +E++ AI +LDG DGR +RVN+A ++
Sbjct: 155 YSDVSEVDAAIDSLDGAEFDGRELRVNLAGNK 186
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 59/85 (69%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++Y+GNLPW+ D+A+L + E G V V+YD+E+GRSRGF FVTM+++ + + I
Sbjct: 1 KLYIGNLPWQCDSAQLAGICQEFGSVELVEVIYDQESGRSRGFAFVTMATQEDAENVIER 60
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSSF 365
LDG ++ GR ++V+ + +Q R SF
Sbjct: 61 LDGHDVGGRPLKVSFPQSKQNRPSF 85
>gi|226532108|ref|NP_001142375.1| uncharacterized protein LOC100274547 [Zea mays]
gi|194708524|gb|ACF88346.1| unknown [Zea mays]
Length = 163
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/161 (53%), Positives = 110/161 (68%), Gaps = 12/161 (7%)
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPER 271
+++V+Y+R T RSRGFGFVTMS+ EEA AVE F+ Y GR L VN P R R
Sbjct: 1 MVEVVYDRMTGRSRGFGFVTMSSAEEAGAAVEQFNGYTFQGRPLRVNCGPPPPRDGSAPR 60
Query: 272 APR----------VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSR 321
APR + G ++YVGNL W VDN+ LE +FSE G+V++A+V+YDR++GRSR
Sbjct: 61 APRGGGGGGGGGSFVDSGNKVYVGNLAWGVDNSTLENLFSEQGQVLDAKVIYDRDSGRSR 120
Query: 322 GFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
GFGFVT S E+N+AI+ LDG +LDGR IRV VAE + RR
Sbjct: 121 GFGFVTYGSAEEVNNAISNLDGIDLDGRQIRVTVAESKPRR 161
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 28/107 (26%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K++VGNL + VD+ L LF + G V A +VIY+
Sbjct: 80 KVYVGNLAWGVDNSTLENLFSEQGQVLDA--------------------------KVIYD 113
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL--TVNKAAPR 265
R++ RSRGFGFVT + EE A+ D+DGR + TV ++ PR
Sbjct: 114 RDSGRSRGFGFVTYGSAEEVNNAISNLDGIDLDGRQIRVTVAESKPR 160
>gi|357440407|ref|XP_003590481.1| 30 kDa ribonucleoprotein [Medicago truncatula]
gi|355479529|gb|AES60732.1| 30 kDa ribonucleoprotein [Medicago truncatula]
gi|388503166|gb|AFK39649.1| unknown [Medicago truncatula]
Length = 280
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 126/220 (57%), Gaps = 44/220 (20%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+LFVGNLP+ VDS +LA +FE AG VE+ EV IY+
Sbjct: 85 RLFVGNLPFSVDSAQLAEIFENAGDVEMVEV--------------------------IYD 118
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR--------------- 265
+ T RSRGFGFVTMS+ E E A + + Y +DGR L VN P
Sbjct: 119 KSTGRSRGFGFVTMSSAAEVEAAAQQLNGYVVDGRELRVNAGPPPPPRSENSRFGENPRF 178
Query: 266 -GTQPERAPR--VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
G +P PR + R++VGNL W VDN LE +F E G+V+ A+V+YDRE+GRSRG
Sbjct: 179 GGDRPRGPPRGGSSDGDNRVHVGNLAWGVDNLALESLFGEQGQVLEAKVIYDRESGRSRG 238
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
FGFVT SS E++ AI LDG +L+GRAIRV+ A+ R +R
Sbjct: 239 FGFVTFSSADEVDSAIRTLDGADLNGRAIRVSPADSRPKR 278
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
+ P R++VGNLP+ VD+A+L ++F G V V+YD+ TGRSRGFGFVTMSS E+
Sbjct: 80 YSPNQRLFVGNLPFSVDSAQLAEIFENAGDVEMVEVIYDKSTGRSRGFGFVTMSSAAEVE 139
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRRS 363
A L+G +DGR +RVN RS
Sbjct: 140 AAAQQLNGYVVDGRELRVNAGPPPPPRS 167
>gi|326512018|dbj|BAJ95990.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 830
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 129/208 (62%), Gaps = 29/208 (13%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E A ++V NLPY +D+E L + F+ AG V LF +V
Sbjct: 567 EGATVYVRNLPYHLDNEGLKLNFQHAGVV---------LFS-----------------KV 600
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
IY+RE RSRGFG+VTM+TV+EAEKAV ++H ++ GR LTV+ AAPRG A R
Sbjct: 601 IYDREIGRSRGFGYVTMNTVQEAEKAVRIYHGSEVHGRRLTVSIAAPRGGTWVGATRSQS 660
Query: 278 PG-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGR--SRGFGFVTMSSETEL 334
RI+V NLP +VDN+RLE++F++HG+VV+ARV+Y+R G SRGFGFVTM+++ E
Sbjct: 661 GSPLRIFVCNLPSQVDNSRLEELFNKHGQVVDARVIYERREGASCSRGFGFVTMATDEES 720
Query: 335 NDAIAALDGQNLDGRAIRVNVAEDRQRR 362
AI AL+ Q L+ + V VA +R R
Sbjct: 721 YKAIRALNKQVLEEHTLVVRVARERPDR 748
>gi|217073784|gb|ACJ85252.1| unknown [Medicago truncatula]
Length = 280
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 126/220 (57%), Gaps = 44/220 (20%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+LFVG+LP+ VDS +LA +FE AG VE+ EV IY+
Sbjct: 85 RLFVGSLPFSVDSAQLAEIFENAGDVEMVEV--------------------------IYD 118
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR--------------- 265
+ T RSRGFGFVTMS+ E E A + + Y +DGR L VN P
Sbjct: 119 KSTGRSRGFGFVTMSSAAEVEAAAQQLNGYVVDGRELRVNAGPPPPPRSENSRFGENPRF 178
Query: 266 -GTQPERAPR--VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
G +P PR + R++VGNL W VDN LE +F E G+V+ A+V+YDRE+GRSRG
Sbjct: 179 GGDRPRGPPRGGSSDGDNRVHVGNLAWGVDNLALESLFGEQGQVLEAKVIYDRESGRSRG 238
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
FGFVT SS E++ AI LDG +L+GRAIRV+ A+ R +R
Sbjct: 239 FGFVTFSSADEVDSAIRTLDGADLNGRAIRVSPADSRPKR 278
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 57/88 (64%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
+ P R++VG+LP+ VD+A+L ++F G V V+YD+ TGRSRGFGFVTMSS E+
Sbjct: 80 YSPNQRLFVGSLPFSVDSAQLAEIFENAGDVEMVEVIYDKSTGRSRGFGFVTMSSAAEVE 139
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRRS 363
A L+G +DGR +RVN RS
Sbjct: 140 AAAQQLNGYVVDGRELRVNAGPPPPPRS 167
>gi|296083731|emb|CBI23720.3| unnamed protein product [Vitis vinifera]
Length = 283
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/213 (40%), Positives = 123/213 (57%), Gaps = 35/213 (16%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
EE E P + KL+ GNLPY DS +LA + + G+ E
Sbjct: 102 EEGAESPVNTKLYFGNLPYSCDSAQLAGIIQNYGSPE----------------------- 138
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN---KAAPRGT 267
L++V+YNR+T RSRGF FVTMS+VE+ +E + GR L VN K P+
Sbjct: 139 ---LVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIENLDGSEYGGRTLRVNFSDKPKPK-- 193
Query: 268 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
P E ++++VGNL W V + L QVF E+G V+ ARV+YD ETGRSRG+GFV
Sbjct: 194 ----LPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVC 249
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
S++ E++ A+ +L+G L+GRAIR+++A+ R+
Sbjct: 250 YSTKAEMDTALESLNGVELEGRAIRISLAQGRR 282
>gi|224099981|ref|XP_002311696.1| predicted protein [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus trichocarpa]
gi|222851516|gb|EEE89063.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 136/241 (56%), Gaps = 35/241 (14%)
Query: 121 SDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLF 180
+D + E T E + SGE E E + P + KL+ GNLPY+VDS +LA +
Sbjct: 72 ADVAQEEAPATAPAVEEEELASGET----EGEADQVPVNTKLYFGNLPYNVDSAQLAGMI 127
Query: 181 EKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEA 240
++ GT E+ EV +Y+RET RSRGF FVTMS++E+
Sbjct: 128 QEYGTPEMVEV--------------------------LYHRETGRSRGFAFVTMSSIEDC 161
Query: 241 EKAVEMFHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPGFRIYVGNLPWEVDNARLEQV 299
E +E GR+L VN A +P+ + P E +++++GNL W V + L Q
Sbjct: 162 ETVIENLDGSQYMGRILRVNFA----DKPKPKEPLYPETEYKLFIGNLSWSVTSESLTQA 217
Query: 300 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
F E+G VV ARV+YD ETG+SRG+GFV S++ EL A+ +L+G L+GRA+RV++AE R
Sbjct: 218 FQEYGNVVGARVLYDGETGKSRGYGFVCYSTKEELETALQSLNGVELEGRALRVSLAEGR 277
Query: 360 Q 360
+
Sbjct: 278 K 278
>gi|388499174|gb|AFK37653.1| unknown [Lotus japonicus]
Length = 302
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/245 (40%), Positives = 131/245 (53%), Gaps = 71/245 (28%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
D K+FVGNLP+ VDS +LA LF+ AG VE+ EV I
Sbjct: 86 DHKVFVGNLPFSVDSAQLAELFQDAGNVEVVEV--------------------------I 119
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE- 277
Y++ T SRGF FVTMS+ EAE A + F+ Y+++GR L VN P P+ R F
Sbjct: 120 YDKTTGNSRGFAFVTMSSAAEAEVAAQQFNNYELEGRALRVNSGPP----PKNENRGFNE 175
Query: 278 -PGFR---------------------------------------IYVGNLPWEVDNARLE 297
P FR ++VGNL W VDNA LE
Sbjct: 176 NPRFRNNSFNRGGSDSYRGGSDGYRGGGSDGYRGGGSSSYSENRVHVGNLAWGVDNAALE 235
Query: 298 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
+F E G+VV+A+V+YDRE+GRSRGFGFVT SS E+N AI +LDG +L+GRAI+V+ A+
Sbjct: 236 SLFREQGRVVDAKVIYDRESGRSRGFGFVTFSSPDEVNSAIRSLDGADLNGRAIKVSQAD 295
Query: 358 DRQRR 362
+ +R
Sbjct: 296 SKPKR 300
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 53/81 (65%)
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
R F P +++VGNLP+ VD+A+L ++F + G V V+YD+ TG SRGF FVTMSS E
Sbjct: 81 RSFAPDHKVFVGNLPFSVDSAQLAELFQDAGNVEVVEVIYDKTTGNSRGFAFVTMSSAAE 140
Query: 334 LNDAIAALDGQNLDGRAIRVN 354
A + L+GRA+RVN
Sbjct: 141 AEVAAQQFNNYELEGRALRVN 161
>gi|224107511|ref|XP_002314506.1| predicted protein [Populus trichocarpa]
gi|222863546|gb|EEF00677.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 120/207 (57%), Gaps = 31/207 (14%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
E P + KL+ GNLPY+VDS +LA + ++ G+ E+ EV +H
Sbjct: 102 EIPVNTKLYFGNLPYNVDSAQLAGIIQEYGSPEMVEVLYH-------------------- 141
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-APRGTQPERAP 273
RET RSRGF FVTMS++E+ +E GR+L VN + P+ +P
Sbjct: 142 ------RETGRSRGFAFVTMSSIEDCNAVIENLDESQYMGRILRVNFSDNPKPKEPLYP- 194
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
E ++++VGNL W + L Q F E+G VV ARV+YD ETG+SRG+GFV S++ E
Sbjct: 195 ---ETEYKLFVGNLSWSATSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKAE 251
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDRQ 360
+ A+ +LDG L+GRA+RV++AE R+
Sbjct: 252 MQTALVSLDGVELEGRALRVSLAEGRK 278
>gi|357128483|ref|XP_003565902.1| PREDICTED: uncharacterized protein LOC100828680 [Brachypodium
distachyon]
Length = 357
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/219 (42%), Positives = 123/219 (56%), Gaps = 40/219 (18%)
Query: 125 EPEGEDTVVEA---GERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFE 181
PE + VV RQ+E EE E+EE+ P + L+VGNL + +D E LA LFE
Sbjct: 169 HPEKQQNVVYPTMLSPRQQECDEEYTSEDEEYYGPAAEGTLYVGNLRHHIDDEYLAQLFE 228
Query: 182 KAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAE 241
G VE +E+ +Y+RET +SRG+G+VTMSTVEEAE
Sbjct: 229 NVGIVEFSEI--------------------------LYDRETGQSRGYGYVTMSTVEEAE 262
Query: 242 KAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS 301
AV FHR ++ G+L+TV +P R+P RI+VGNLP EVD + L +FS
Sbjct: 263 MAVNTFHRRELYGKLMTVEMRSP---HQHRSP------VRIFVGNLPCEVDGSMLNLLFS 313
Query: 302 EHGKVVNARVVYDRETG--RSRGFGFVTMSSETELNDAI 338
EHG+VV+ +V Y G RSR FGFVTM++ E +DAI
Sbjct: 314 EHGQVVDTKVAYGYVKGVWRSRRFGFVTMATREESDDAI 352
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVGNL +D+ L Q+F G V + ++YDRETG+SRG+G+VTMS+ E A+
Sbjct: 209 LYVGNLRHHIDDEYLAQLFENVGIVEFSEILYDRETGQSRGYGYVTMSTVEEAEMAVNTF 268
Query: 342 DGQNLDGRAIRVNVAEDRQRRS 363
+ L G+ + V + Q RS
Sbjct: 269 HRRELYGKLMTVEMRSPHQHRS 290
>gi|225433269|ref|XP_002285469.1| PREDICTED: uncharacterized protein LOC100261382 [Vitis vinifera]
Length = 751
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 117/206 (56%), Gaps = 35/206 (16%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
EE E P + KL+ GNLPY DS +LA + + G+ E
Sbjct: 102 EEGAESPVNTKLYFGNLPYSCDSAQLAGIIQNYGSPE----------------------- 138
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN---KAAPRGT 267
L++V+YNR+T RSRGF FVTMS+VE+ +E + GR L VN K P+
Sbjct: 139 ---LVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIENLDGSEYGGRTLRVNFSDKPKPK-- 193
Query: 268 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
P E ++++VGNL W V + L QVF E+G V+ ARV+YD ETGRSRG+GFV
Sbjct: 194 ----LPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETGRSRGYGFVC 249
Query: 328 MSSETELNDAIAALDGQNLDGRAIRV 353
S++ E++ A+ +L+G L+GRAIRV
Sbjct: 250 YSTKAEMDTALESLNGVELEGRAIRV 275
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++Y GNLP+ D+A+L + +G V+Y+R+TGRSRGF FVTMSS + N I
Sbjct: 112 KLYFGNLPYSCDSAQLAGIIQNYGSPELVEVLYNRDTGRSRGFAFVTMSSVEDCNAVIEN 171
Query: 341 LDGQNLDGRAIRVNVAE 357
LDG GR +RVN ++
Sbjct: 172 LDGSEYGGRTLRVNFSD 188
>gi|302822192|ref|XP_002992755.1| hypothetical protein SELMODRAFT_4991 [Selaginella moellendorffii]
gi|300139400|gb|EFJ06141.1| hypothetical protein SELMODRAFT_4991 [Selaginella moellendorffii]
Length = 177
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 122/199 (61%), Gaps = 26/199 (13%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
++++VGNL ++ DSE+LA + ++AG + E +V+
Sbjct: 1 SRIYVGNLSWNCDSEELAKVLQQAGILAHVE-------------------------EVVC 35
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAP-RVFEP 278
+RET RSRGFG+VT+++++ A+ AV+ + + GR L + + P + P V
Sbjct: 36 DRETGRSRGFGYVTLTSIDFAQVAVQKLDGHIVQGRALKASFSQPYKKAGKEGPVEVAAS 95
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
++++GNLPW VD+ LE+ F HGKVV A++VYDR+TGRSRGFGFVT+SS E ++A+
Sbjct: 96 HTKVFIGNLPWGVDDGSLEEFFRAHGKVVEAKIVYDRDTGRSRGFGFVTLSSPKEADEAV 155
Query: 339 AALDGQNLDGRAIRVNVAE 357
+LDG + DGR +RV +A+
Sbjct: 156 KSLDGADCDGRRLRVKLAD 174
>gi|302758260|ref|XP_002962553.1| hypothetical protein SELMODRAFT_26412 [Selaginella moellendorffii]
gi|300169414|gb|EFJ36016.1| hypothetical protein SELMODRAFT_26412 [Selaginella moellendorffii]
Length = 177
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 121/199 (60%), Gaps = 26/199 (13%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
++++VGNL ++ DSE+LA + ++AG + E +V+
Sbjct: 1 SRIYVGNLSWNCDSEELAKVLQQAGILAHVE-------------------------EVVC 35
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAP-RVFEP 278
+RET RSRGFG+VT+++++ A+ AV+ + + GR L + + P + P V
Sbjct: 36 DRETGRSRGFGYVTLTSIDFAQVAVQKLDGHIVQGRALKASYSQPYKKAGKEGPVEVAAS 95
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
++++GNLPW VD+ LE+ F HGKVV ++VYDR+TGRSRGFGFVT+SS E ++A+
Sbjct: 96 HTKVFIGNLPWGVDDGSLEEFFRAHGKVVEVKIVYDRDTGRSRGFGFVTLSSPKEADEAV 155
Query: 339 AALDGQNLDGRAIRVNVAE 357
+LDG + DGR +RV +A+
Sbjct: 156 KSLDGADCDGRRLRVKLAD 174
>gi|297837519|ref|XP_002886641.1| hypothetical protein ARALYDRAFT_475310 [Arabidopsis lyrata subsp.
lyrata]
gi|297332482|gb|EFH62900.1| hypothetical protein ARALYDRAFT_475310 [Arabidopsis lyrata subsp.
lyrata]
Length = 252
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/214 (40%), Positives = 121/214 (56%), Gaps = 30/214 (14%)
Query: 149 EEEEFVEPPE--DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
EEE+ ++PP + KL+ GNLPY+VDS LA + + E+ EV
Sbjct: 66 EEEKDLDPPAAINTKLYFGNLPYNVDSATLAQIIQDFANPELVEV--------------- 110
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRG 266
+YNR+T +SRGF FVTMS VE+ ++ + GR L VN A
Sbjct: 111 -----------LYNRDTGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVNFA--DK 157
Query: 267 TQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
+P + P E +++VGNL W V + L + F E G VV ARVVYD +TGRSRG+GFV
Sbjct: 158 PKPNKEPLYPETEHKLFVGNLSWTVTSESLAEAFRECGDVVGARVVYDGDTGRSRGYGFV 217
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
SS+ E+ A+ +LDG L+GRAIRVN+A+ ++
Sbjct: 218 CYSSKAEMETALESLDGFELEGRAIRVNLAQGKK 251
>gi|168033890|ref|XP_001769447.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679367|gb|EDQ65816.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 130/234 (55%), Gaps = 36/234 (15%)
Query: 128 GEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVE 187
G D+V + G + V EEE+F + KL+VGNLP+ DS +LA + GTV+
Sbjct: 20 GVDSVADGGSSDVAAP---VAEEEQF-----ETKLYVGNLPWTCDSAQLAEICSDHGTVD 71
Query: 188 IAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF 247
+ EV IY++ + RSRGF FVTM+T E+A+ +
Sbjct: 72 VVEV--------------------------IYDKISGRSRGFAFVTMATPEDAQAVINAL 105
Query: 248 HRYDIDGRLLTVNKAAPRGTQP--ERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 305
D+ GR L VN + +P ER+ R + +++VGNL W D A L FSE+G
Sbjct: 106 DGTDMGGRPLKVNYPQSQKDKPRVERSERPRDDANKLFVGNLSWGCDEAALYSFFSEYGT 165
Query: 306 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
VV+A+VV+DR++GRSRGFGFVTM S N AI LDG LDGR +RVN+A ++
Sbjct: 166 VVDAKVVFDRDSGRSRGFGFVTMESAAAANAAIENLDGAELDGRRLRVNLAGEK 219
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 66/106 (62%), Gaps = 2/106 (1%)
Query: 259 VNKAAPRGTQPERAPRVFEPGF--RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRE 316
V+ A G+ AP E F ++YVGNLPW D+A+L ++ S+HG V V+YD+
Sbjct: 21 VDSVADGGSSDVAAPVAEEEQFETKLYVGNLPWTCDSAQLAEICSDHGTVDVVEVIYDKI 80
Query: 317 TGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
+GRSRGF FVTM++ + I ALDG ++ GR ++VN + ++ +
Sbjct: 81 SGRSRGFAFVTMATPEDAQAVINALDGTDMGGRPLKVNYPQSQKDK 126
>gi|294464377|gb|ADE77701.1| unknown [Picea sitchensis]
Length = 299
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 128/220 (58%), Gaps = 41/220 (18%)
Query: 152 EFVEP----PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVC 207
E EP P K+++GNLP+ DS +LA + ++ G+VE+ EV
Sbjct: 99 EISEPLHDIPAGTKVYLGNLPFSCDSAELAGIIQEHGSVEMVEV---------------- 142
Query: 208 AVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN--KAAPR 265
IY++ T RSRGF F TMS+VE+A VE GR L VN + A R
Sbjct: 143 ----------IYDQNTGRSRGFAFATMSSVEDANALVENLDGSQYGGRTLRVNLREEASR 192
Query: 266 G--------TQPERAPRVFEPG-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRE 316
++ E+ + G R+Y+GNL W+V+ L +VFSEHG +++A++V+DRE
Sbjct: 193 SLRVNLRDKSRSEQRNQTNNDGQHRVYIGNLSWDVNEEILNEVFSEHGNLLDAKIVFDRE 252
Query: 317 TGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
TGRSRGFGF+T S+++E A+A+L+G+ L+GRA+RV++A
Sbjct: 253 TGRSRGFGFITFSTQSEAEAAVASLNGKELEGRAMRVDLA 292
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 57/96 (59%), Gaps = 6/96 (6%)
Query: 272 APRVFEP------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 325
AP + EP G ++Y+GNLP+ D+A L + EHG V V+YD+ TGRSRGF F
Sbjct: 97 APEISEPLHDIPAGTKVYLGNLPFSCDSAELAGIIQEHGSVEMVEVIYDQNTGRSRGFAF 156
Query: 326 VTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
TMSS + N + LDG GR +RVN+ E+ R
Sbjct: 157 ATMSSVEDANALVENLDGSQYGGRTLRVNLREEASR 192
>gi|297816516|ref|XP_002876141.1| RNA-binding protein cp33 [Arabidopsis lyrata subsp. lyrata]
gi|297321979|gb|EFH52400.1| RNA-binding protein cp33 [Arabidopsis lyrata subsp. lyrata]
Length = 330
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 123/213 (57%), Gaps = 35/213 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E+ +L+VGNLPY + S +L+ LF +AG V +Q+
Sbjct: 115 EEGRLYVGNLPYTITSSELSQLFGEAGNV--------------------------VDVQI 148
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPE------ 270
+Y++ TDRSRGFGFVTM T+EEA++A++MF+ I GR + VN PRG + E
Sbjct: 149 VYDKVTDRSRGFGFVTMGTIEEAKEAIQMFNSSQIGGRTVKVNLPEVPRGGEREVMRTKI 208
Query: 271 --RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
+ +IY GNL W + + L+ F + V+ A+V+Y+R TGRSRGFGF++
Sbjct: 209 RDNNRSYVDSPHKIYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISF 268
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
S ++ A+A ++G ++GRA+R+N+A +R+R
Sbjct: 269 ESAEDVQSALATMNGVEVEGRALRLNLASERER 301
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV 275
+VIY R T RSRGFGF++ + E+ + A+ + +++GR L +N A+ R +P +P
Sbjct: 250 KVIYERNTGRSRGFGFISFESAEDVQSALATMNGVEVEGRALRLNLASER-ERPTVSPPS 308
Query: 276 FEPG 279
E G
Sbjct: 309 VEEG 312
>gi|356534904|ref|XP_003535991.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 282
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 118/201 (58%), Gaps = 31/201 (15%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+ GNLPY VDS KLA L + G+ E L++V+Y+
Sbjct: 111 KLYFGNLPYSVDSAKLAGLIQDYGSAE--------------------------LIEVLYD 144
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPG 279
R++ +SRGF FVTMS +E+ +E + GR L VN + ++P+ + P E
Sbjct: 145 RDSGKSRGFAFVTMSCIEDCNAVIENLDGKEFLGRTLRVNFS----SKPKPKEPLYPETE 200
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+++VGNL W V N L Q F E+G VV ARV+YD ETGRSRG+GFV S++ E+ A+A
Sbjct: 201 HKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTQAEMEAAVA 260
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
AL+ L+GRA+RV++A+ ++
Sbjct: 261 ALNDVELEGRAMRVSLAQGKR 281
>gi|388500434|gb|AFK38283.1| unknown [Lotus japonicus]
Length = 273
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 118/203 (58%), Gaps = 31/203 (15%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
+ KL+ GNLPY VDS +LA L E+ G+ E L++V+
Sbjct: 100 NTKLYFGNLPYSVDSAQLAGLIEEYGSAE--------------------------LIEVL 133
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFE 277
Y+R++ +SRGF FVTMS VE+ +E + GR L VN + +P+ + P E
Sbjct: 134 YDRDSGKSRGFAFVTMSCVEDCNTVIENLDGKEFLGRTLRVNLS----DKPKPKEPLYPE 189
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
+++VGNL W V + L QVF E+G VV ARV+YD ETGRSRG+GFV S +EL A
Sbjct: 190 TEHKLFVGNLSWTVTSESLIQVFQEYGTVVGARVLYDGETGRSRGYGFVCYSKRSELETA 249
Query: 338 IAALDGQNLDGRAIRVNVAEDRQ 360
+ +L+ L+GRAIRV++AE ++
Sbjct: 250 LISLNNVELEGRAIRVSLAEGKR 272
>gi|558629|emb|CAA57551.1| chloroplast RNA binding protein [Phaseolus vulgaris]
Length = 287
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 114/201 (56%), Gaps = 31/201 (15%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+ GNLPY VDS KLA L + G+ E L++V+Y+
Sbjct: 114 KLYFGNLPYSVDSAKLAGLIQDYGSAE--------------------------LIEVLYD 147
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPERAPRVFEPG 279
R+T +SRGF FVTMS +E+ +E + GR L VN P+ +P E
Sbjct: 148 RDTGKSRGFAFVTMSCIEDCNAVIENLDGKEYLGRTLRVNFSNKPKAKEPLYP----ETE 203
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+++VGNL W V N L Q F E+G VV ARV+YD ETGRSRG+GFV S++ E+ A+
Sbjct: 204 HKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCFSTKEEMEAALG 263
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
AL+ L+GRA+RV++AE ++
Sbjct: 264 ALNDVELEGRAMRVSLAEGKR 284
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 26/120 (21%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCA 208
+ +E + P + KLFVGNL + V +E L F++ GTV A
Sbjct: 193 KAKEPLYPETEHKLFVGNLSWSVTNEILTQAFQEYGTVVGA------------------- 233
Query: 209 VFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ 268
+V+Y+ ET RSRG+GFV ST EE E A+ + +++GR + V+ A + Q
Sbjct: 234 -------RVLYDGETGRSRGYGFVCFSTKEEMEAALGALNDVELEGRAMRVSLAEGKRAQ 286
>gi|2104687|emb|CAA66479.1| RNA- or ssDNA-binding protein [Vicia faba var. minor]
Length = 289
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 129/225 (57%), Gaps = 35/225 (15%)
Query: 136 GERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHF 195
G+ ++E+GEE V EE+ KL+ GNLPY VDS KLA L E+ G+ E
Sbjct: 99 GQGEKENGEEIVAEEDT------RTKLYFGNLPYSVDSAKLAGLIEEYGSAE-------- 144
Query: 196 LFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGR 255
L++V+Y+R+T +SRGF F TM+ VE+ + +E + GR
Sbjct: 145 ------------------LVEVLYDRDTGKSRGFAFATMTCVEDCKAVIENLDGKEFMGR 186
Query: 256 LLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDR 315
L VN + + P E +++++GNL W+V + L + F EHG VV ARV+YD
Sbjct: 187 TLRVNFSDKPKAKESLYP---ETEYKLFIGNLSWKVTSEILTEAFQEHGTVVGARVIYDG 243
Query: 316 ETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
ETG SRG+GFV+ ++++E+ A+ ++ L+GRA+RV++A+ ++
Sbjct: 244 ETGNSRGYGFVSYANKSEMEAALTIMNDVELEGRALRVSLAQGKR 288
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 52/85 (61%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++Y GNLP+ VD+A+L + E+G V+YDR+TG+SRGF F TM+ + I
Sbjct: 118 KLYFGNLPYSVDSAKLAGLIEEYGSAELVEVLYDRDTGKSRGFAFATMTCVEDCKAVIEN 177
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSSF 365
LDG+ GR +RVN ++ + + S
Sbjct: 178 LDGKEFMGRTLRVNFSDKPKAKESL 202
>gi|255574887|ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 285
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 119/205 (58%), Gaps = 35/205 (17%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
+ KL+ GNLPY+VDS +LA + + GT E L++V+
Sbjct: 112 NTKLYFGNLPYNVDSAQLAGIIQDYGTPE--------------------------LVEVL 145
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN---KAAPRGTQPERAPRV 275
Y+R+T RSRGF FVTMSTVE+ +E GR+L VN K P + P
Sbjct: 146 YDRDTGRSRGFAFVTMSTVEDCNAVIENLDGSQFMGRILRVNFSDKPKP------KEPLY 199
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
E +++VGNL W V + L + F E+G +V ARV+YD ETGRSRG+GFV ++ +E+
Sbjct: 200 PETEHKLFVGNLSWSVTSESLVEAFQEYGNIVGARVLYDGETGRSRGYGFVCYATRSEME 259
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQ 360
+A+ +L+G L+GRA+RV++A+ ++
Sbjct: 260 NALVSLNGVELEGRAMRVSLAQGKK 284
>gi|217073820|gb|ACJ85270.1| unknown [Medicago truncatula]
Length = 285
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 119/213 (55%), Gaps = 35/213 (16%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
E E KL+ GNLPY VDS LA L E+ G+ E
Sbjct: 104 ETVAEVDTRTKLYFGNLPYSVDSALLAGLIEEYGSAE----------------------- 140
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN---KAAPRGT 267
L++V+Y+R+T +SRGF FVTMS VE+ ++ + GR L VN K P+
Sbjct: 141 ---LIEVLYDRDTGKSRGFAFVTMSCVEDCNAVIQNLDGKEFMGRTLRVNFSDKPKPK-- 195
Query: 268 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
P E ++++VGNL W V + L Q F EHG VV ARV++D ETG+SRG+GFV+
Sbjct: 196 ----EPLYPETEYKLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVS 251
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
++++E++ A+A +D L+GR +RV++A+ ++
Sbjct: 252 YATKSEMDTALAIMDNVELEGRTLRVSLAQGKR 284
>gi|449432502|ref|XP_004134038.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449487476|ref|XP_004157645.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 276
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 115/203 (56%), Gaps = 35/203 (17%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+ GNLPY VDS +LA + + G E L++V+Y+
Sbjct: 103 KLYFGNLPYSVDSSQLAAIVQDYGIAE--------------------------LIEVLYD 136
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN---KAAPRGTQPERAPRVFE 277
R T +SRGF FVTMS++E+ K +E GR+L VN K P+ P E
Sbjct: 137 RNTGKSRGFAFVTMSSIEDCNKVIENLDGSAYMGRILRVNFSDKPKPK------EPLYPE 190
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
++++VGNL W V + L Q F E+G VV ARV+YD ETG+SRG+GFV+ S+++E+ A
Sbjct: 191 TEYKLFVGNLSWSVTSEILTQAFQEYGNVVGARVIYDGETGKSRGYGFVSYSTKSEMETA 250
Query: 338 IAALDGQNLDGRAIRVNVAEDRQ 360
+ ++ L+GR IRV++AE +Q
Sbjct: 251 LETINELELEGRVIRVSLAEGKQ 273
>gi|357439793|ref|XP_003590174.1| 31 kDa ribonucleoprotein [Medicago truncatula]
gi|355479222|gb|AES60425.1| 31 kDa ribonucleoprotein [Medicago truncatula]
Length = 387
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 119/213 (55%), Gaps = 35/213 (16%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
E E KL+ GNLPY VDS LA L E+ G+ E
Sbjct: 206 ETVAEVDTRTKLYFGNLPYSVDSALLAGLIEEYGSAE----------------------- 242
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN---KAAPRGT 267
L++V+Y+R+T +SRGF FVTMS VE+ ++ + GR L VN K P+
Sbjct: 243 ---LIEVLYDRDTGKSRGFAFVTMSCVEDCNAVIQNLDGKEFMGRTLRVNFSDKPKPK-- 297
Query: 268 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
P E ++++VGNL W V + L Q F EHG VV ARV++D ETG+SRG+GFV+
Sbjct: 298 ----EPLYPETEYKLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVS 353
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
++++E++ A+A +D L+GR +RV++A+ ++
Sbjct: 354 YATKSEMDTALAIMDNVELEGRTLRVSLAQGKR 386
>gi|15218972|ref|NP_176208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|13194798|gb|AAK15561.1|AF348590_1 putative nucleic acid-binding protein [Arabidopsis thaliana]
gi|4249379|gb|AAD14476.1| Strong similarity to gb|X82030 chloroplast RNA binding protein
(RNP1) from Phaseolus vulgaris [Arabidopsis thaliana]
gi|21593720|gb|AAM65687.1| nucleic acid-binding protein, putative [Arabidopsis thaliana]
gi|222423361|dbj|BAH19654.1| AT1G60000 [Arabidopsis thaliana]
gi|332195527|gb|AEE33648.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 258
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 126/234 (53%), Gaps = 36/234 (15%)
Query: 129 EDTVVEAGERQEESGEEGVFEEEEFVEPPE--DAKLFVGNLPYDVDSEKLAMLFEKAGTV 186
E V+ E +++ G V ++PP + KL+ GNLPY+VDS LA + +
Sbjct: 58 ETITVKLEEEEKDDGASAV------LDPPAAVNTKLYFGNLPYNVDSATLAQIIQDFANP 111
Query: 187 EIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 246
E L++V+YNR+T +SRGF FVTMS VE+ ++
Sbjct: 112 E--------------------------LVEVLYNRDTGQSRGFAFVTMSNVEDCNIIIDN 145
Query: 247 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 306
+ GR L VN A +P + P E +++VGNL W V + L F E G V
Sbjct: 146 LDGTEYLGRALKVNFA--DKPKPNKEPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDV 203
Query: 307 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
V ARVV+D +TGRSRG+GFV SS+ E+ A+ +LDG L+GRAIRVN+A+ ++
Sbjct: 204 VGARVVFDGDTGRSRGYGFVCYSSKAEMETALESLDGFELEGRAIRVNLAQGKK 257
>gi|681912|dbj|BAA06523.1| RNA-binding protein cp33 [Arabidopsis thaliana]
Length = 321
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 123/213 (57%), Gaps = 35/213 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E+ +L+VGNLPY + S +L+ +F +AGTV +Q+
Sbjct: 106 EEWRLYVGNLPYTITSSELSQIFGEAGTV--------------------------VDVQI 139
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPE------ 270
+Y++ TDRSRGFGFVTM ++EEA++A++MF+ I GR + VN PRG + E
Sbjct: 140 VYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKI 199
Query: 271 --RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
+ ++Y GNL W + + L+ F + V+ A+V+Y+R TGRSRGFGF++
Sbjct: 200 RDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISF 259
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
S + A+A ++G ++GRA+R+N+A +R++
Sbjct: 260 ESAENVQSALATMNGVEVEGRALRLNLASEREK 292
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV 275
+VIY R T RSRGFGF++ + E + A+ + +++GR L +N A+ R +P +P
Sbjct: 241 KVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASER-EKPTVSPPS 299
Query: 276 FEPG 279
E G
Sbjct: 300 VEEG 303
>gi|224138286|ref|XP_002322776.1| predicted protein [Populus trichocarpa]
gi|222867406|gb|EEF04537.1| predicted protein [Populus trichocarpa]
Length = 324
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/219 (40%), Positives = 126/219 (57%), Gaps = 43/219 (19%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
++ E+ KL+VGNLPY + S +LA +FE+AG V AEV +C
Sbjct: 110 IKAREEGKLYVGNLPYSMTSSELAEVFEEAGRVFGAEV--------------IC------ 149
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPERA 272
+R TDRSRGFGFVTM +VEEA++A+ MF+ + GR L VN PRG + E
Sbjct: 150 ------DRVTDRSRGFGFVTMESVEEAKEAIRMFNGSQVGGRTLRVNFPEVPRGGERE-- 201
Query: 273 PRVFEP-------GF-----RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRS 320
V EP GF +IY GNL W + + L F+ +++A+V+Y+R+TGRS
Sbjct: 202 --VMEPRIRSGYKGFIDSEHKIYAGNLGWRLTSEGLGDAFANQPGLLSAKVIYERDTGRS 259
Query: 321 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
RGFGFV+ S A+ A++G+ +DGR +R+N+A +R
Sbjct: 260 RGFGFVSFDSAENAEAALEAMNGEEVDGRPLRLNLAGER 298
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
+VIY R+T RSRGFGFV+ + E AE A+E + ++DGR L +N A R P
Sbjct: 249 KVIYERDTGRSRGFGFVSFDSAENAEAALEAMNGEEVDGRPLRLNLAGERSYPP 302
>gi|88911212|gb|ABD58896.1| chloroplast single strand DNA binding protein [Mesostigma viride]
Length = 299
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 120/233 (51%), Gaps = 59/233 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL + D E L F + G V+ AEV + +
Sbjct: 91 KLYVGNLAWSCDDEMLNQAFSQFGEVKAAEV--------------------------VLD 124
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV----- 275
RE+ RSRGF FVTM++ + AEKA ++ GR + VN P+G ERAPR
Sbjct: 125 RESGRSRGFAFVTMASPDAAEKARRGLDGTELAGRAIRVNFPQPKG---ERAPRAERGER 181
Query: 276 ----------FEP--------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRET 317
+ P R+YVGNLPW +D+ LE +F E G V ARVV DR++
Sbjct: 182 SERSERSERTYTPRGDGEAGDANRLYVGNLPWSMDDGMLEDLFMEFGTVNYARVVMDRDS 241
Query: 318 GRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA-------EDRQRRS 363
GRSRGF FV +S+ E N+A+A LDG+ + GR IRVN+A E R+RR+
Sbjct: 242 GRSRGFAFVALSTPEEANEAMANLDGEEIGGRTIRVNLATKSSGNREGRERRA 294
>gi|226497258|ref|NP_001140274.1| uncharacterized protein LOC100272318 [Zea mays]
gi|194698792|gb|ACF83480.1| unknown [Zea mays]
gi|414883568|tpg|DAA59582.1| TPA: ribonucleoprotein [Zea mays]
Length = 341
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 116/203 (57%), Gaps = 31/203 (15%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+LFVGNLPY SE+LA +F +AG V+ A Q+IY
Sbjct: 112 GRLFVGNLPYTYTSEELAQVFSEAGRVDDA--------------------------QIIY 145
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-APRG----TQPERAPR 274
++ T+RSRGF FVTM+T EEA KA++MF + GR VN PRG T R
Sbjct: 146 DKVTNRSRGFAFVTMATAEEAAKAIQMFDGALLGGRTARVNYPEVPRGGERRTVTMSGRR 205
Query: 275 VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
+ ++IY GNL W V L VF +++ARV+++RETGRSRGFGFV+ S+ +
Sbjct: 206 RDDGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDA 265
Query: 335 NDAIAALDGQNLDGRAIRVNVAE 357
A+ +LDG L+GR++R+++AE
Sbjct: 266 QAALESLDGVELEGRSLRLSLAE 288
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 271 RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
R PR +PG R++VGNLP+ + L QVFSE G+V +A+++YD+ T RSRGF FVTM++
Sbjct: 104 RPPRGDDPG-RLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMAT 162
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAE 357
E AI DG L GR RVN E
Sbjct: 163 AEEAAKAIQMFDGALLGGRTARVNYPE 189
>gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays]
Length = 341
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 115/203 (56%), Gaps = 31/203 (15%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+LFVGNLPY SE+LA +F +AG V+ A Q+IY
Sbjct: 112 GRLFVGNLPYTYTSEELAQVFSEAGRVDDA--------------------------QIIY 145
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-APRG----TQPERAPR 274
++ T+RSRGF FVTM+T EEA KA++MF + GR VN PRG T R
Sbjct: 146 DKVTNRSRGFAFVTMATAEEAAKAIQMFDGALLGGRTARVNYPEVPRGGERRTVTMSGRR 205
Query: 275 VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
+ ++IY GNL W V L VF +++ARV+++RETGRSRGFGFV+ S+ +
Sbjct: 206 RDDGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDA 265
Query: 335 NDAIAALDGQNLDGRAIRVNVAE 357
A+ +LDG L+GR +R+++AE
Sbjct: 266 QAALESLDGVELEGRPLRLSLAE 288
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 271 RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
R PR +PG R++VGNLP+ + L QVFSE G+V +A+++YD+ T RSRGF FVTM++
Sbjct: 104 RPPRGDDPG-RLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMAT 162
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAE 357
E AI DG L GR RVN E
Sbjct: 163 AEEAAKAIQMFDGALLGGRTARVNYPE 189
>gi|302754352|ref|XP_002960600.1| hypothetical protein SELMODRAFT_25552 [Selaginella moellendorffii]
gi|302771648|ref|XP_002969242.1| hypothetical protein SELMODRAFT_15428 [Selaginella moellendorffii]
gi|300162718|gb|EFJ29330.1| hypothetical protein SELMODRAFT_15428 [Selaginella moellendorffii]
gi|300171539|gb|EFJ38139.1| hypothetical protein SELMODRAFT_25552 [Selaginella moellendorffii]
Length = 197
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 115/211 (54%), Gaps = 32/211 (15%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
EP + KL+VGN+ ++VDS+ LA F G E+ EV
Sbjct: 13 EPAPNTKLYVGNIAWNVDSKMLADCFNGVGITELEEV----------------------- 49
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPERAP 273
+Y+R +SRGF FVT+ST + A+ A+E ++++GR L VN PRG
Sbjct: 50 ---MYDRMLGKSRGFAFVTLSTEDAAKTAIEKLDGHELEGRPLRVNYPQVPRGGGGFGGG 106
Query: 274 RVFEPGF-----RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
P + +V N+PW VD+ L++ FS HG VV+ R++ D E+GRSRG GFVT
Sbjct: 107 FGTRPSIPANPAKCFVANIPWSVDDQGLQEFFSSHGTVVDCRILTDAESGRSRGIGFVTF 166
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
++ E N+AI+ALDG L GR+IRV +A R
Sbjct: 167 ATPDEANNAISALDGAELGGRSIRVALATGR 197
>gi|115449577|ref|NP_001048500.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|47847880|dbj|BAD21673.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|47848169|dbj|BAD21996.1| putative RNA-binding protein RNP1 precursor [Oryza sativa Japonica
Group]
gi|113538031|dbj|BAF10414.1| Os02g0815200 [Oryza sativa Japonica Group]
gi|125584133|gb|EAZ25064.1| hypothetical protein OsJ_08857 [Oryza sativa Japonica Group]
gi|215695143|dbj|BAG90334.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737594|dbj|BAG96724.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 316
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 117/201 (58%), Gaps = 31/201 (15%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+ GNLPY+ DS +LA + + T E+ EV +Y+
Sbjct: 146 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEV--------------------------LYD 179
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPG 279
R T RSRGF FVTMST+E+ E+ ++ GR + VN A +P+ + P E
Sbjct: 180 RATGRSRGFAFVTMSTIEDCEQVIKNLDGSLYSGRTMRVNFA----DKPKPKLPLYPETE 235
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+++VGNL W V + L ++F + G VV ARV+YD ETGRSRG+GFV S++ E+++A++
Sbjct: 236 HKLFVGNLSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEALS 295
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
+L+G L+GR IRVN+A ++
Sbjct: 296 SLNGTELEGREIRVNLALGKK 316
>gi|168054274|ref|XP_001779557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669038|gb|EDQ55633.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 117/210 (55%), Gaps = 36/210 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+K++VGNLP+ DS +LA + + GTV++ EV IY
Sbjct: 23 SKVYVGNLPWTCDSAQLAEICSQHGTVDVVEV--------------------------IY 56
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-----KAAPRGTQPERAP- 273
++ + RSRGF FVTM++ ++A+ + D+ GR L VN K PR + E P
Sbjct: 57 DKLSGRSRGFAFVTMASHDDAQALINALDGSDMGGRALKVNFPQSQKDKPRFEKSEARPP 116
Query: 274 ----RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
R + +++VGN+PW D A + +FS +G VV+A++VYDR++GRSRGFGFVTM
Sbjct: 117 TADRRPRDDPNKLFVGNIPWGCDEAAMTSLFSPYGSVVDAKIVYDRDSGRSRGFGFVTME 176
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAEDR 359
+ A+ LDG LDGR +RVN A ++
Sbjct: 177 KVGDAQTAMENLDGTELDGRELRVNFAGEK 206
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 60/87 (68%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLPW D+A+L ++ S+HG V V+YD+ +GRSRGF FVTM+S + I
Sbjct: 22 GSKVYVGNLPWTCDSAQLAEICSQHGTVDVVEVIYDKLSGRSRGFAFVTMASHDDAQALI 81
Query: 339 AALDGQNLDGRAIRVNVAEDRQRRSSF 365
ALDG ++ GRA++VN + ++ + F
Sbjct: 82 NALDGSDMGGRALKVNFPQSQKDKPRF 108
>gi|242047468|ref|XP_002461480.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
gi|241924857|gb|EER98001.1| hypothetical protein SORBIDRAFT_02g003310 [Sorghum bicolor]
Length = 338
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/202 (41%), Positives = 116/202 (57%), Gaps = 31/202 (15%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+LFVGNLPY SE+LA +F +AG V+ A Q+IY+
Sbjct: 111 RLFVGNLPYTYTSEELAQVFAEAGRVDDA--------------------------QIIYD 144
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-APRGTQPE---RAPRVF 276
+ T+RSRGF FVTM+T EEA KA++MF + GR VN PRG + A R
Sbjct: 145 KVTNRSRGFAFVTMATAEEAAKAIQMFDGALLGGRTARVNYPEVPRGGERRTVTMAGRRR 204
Query: 277 EPG-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
+ G ++IY GNL W V L VF +++ARV+++RETGRSRGFGFV+ + +
Sbjct: 205 DDGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFRTAEDAQ 264
Query: 336 DAIAALDGQNLDGRAIRVNVAE 357
A+ ALDG L+GR +R+++AE
Sbjct: 265 AALEALDGVELEGRPLRLSLAE 286
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 264 PRGTQPERA--PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSR 321
PR P R+ R +PG R++VGNLP+ + L QVF+E G+V +A+++YD+ T RSR
Sbjct: 93 PRAYSPPRSRPTRGDDPG-RLFVGNLPYTYTSEELAQVFAEAGRVDDAQIIYDKVTNRSR 151
Query: 322 GFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
GF FVTM++ E AI DG L GR RVN E
Sbjct: 152 GFAFVTMATAEEAAKAIQMFDGALLGGRTARVNYPE 187
>gi|224091455|ref|XP_002309257.1| predicted protein [Populus trichocarpa]
gi|222855233|gb|EEE92780.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 130/226 (57%), Gaps = 40/226 (17%)
Query: 147 VFEEE---EFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFH 203
+ EEE E ++ E+ KL+VGNLPY + S +L +FE+AG V AEV
Sbjct: 97 IVEEEGDVEAIKATEEGKLYVGNLPYSMTSSELTEVFEEAGRVFSAEV------------ 144
Query: 204 MWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KA 262
IY+R TDRSRGFGFVTM +VEEA+KA++MF+ GR + VN
Sbjct: 145 --------------IYDRVTDRSRGFGFVTMGSVEEAKKAIQMFNGTQFGGRSVRVNFPE 190
Query: 263 APRGTQPE-RAPRVFEPGFR--------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVY 313
PRG + E PR+ + G++ IY GNL W + + L F+ V++A+V+Y
Sbjct: 191 VPRGGEREVMGPRI-QSGYKGFIDSEHKIYAGNLGWRLTSEGLRDAFANQPGVLSAKVIY 249
Query: 314 DRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
+R++ RSRGFGFV+ S A+ A++G+ ++GR +R+N+A +R
Sbjct: 250 ERDSRRSRGFGFVSFESAENAEAALEAMNGEEVEGRPMRLNLAGER 295
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
+VIY R++ RSRGFGFV+ + E AE A+E + +++GR + +N A R P
Sbjct: 246 KVIYERDSRRSRGFGFVSFESAENAEAALEAMNGEEVEGRPMRLNLAGERSPPP 299
>gi|125541605|gb|EAY88000.1| hypothetical protein OsI_09422 [Oryza sativa Indica Group]
Length = 318
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 117/201 (58%), Gaps = 31/201 (15%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+ GNLPY+ DS +LA + + T E+ EV +Y+
Sbjct: 148 KLYFGNLPYNCDSAQLAGIVQDYATPEMVEV--------------------------LYD 181
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPG 279
R T RSRGF FVTMST+E+ E+ ++ GR + VN A +P+ + P E
Sbjct: 182 RATGRSRGFAFVTMSTIEDCEQVIKNLDGSLYSGRTMRVNFA----DKPKPKLPLYPETE 237
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+++VGNL W V + L ++F + G VV ARV+YD ETGRSRG+GFV S++ E+++A++
Sbjct: 238 HKLFVGNLSWTVTSEMLTEMFQKCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEALS 297
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
+L+G L+GR IRVN+A ++
Sbjct: 298 SLNGTELEGREIRVNLALGKK 318
>gi|148907319|gb|ABR16796.1| unknown [Picea sitchensis]
Length = 387
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 124/241 (51%), Gaps = 39/241 (16%)
Query: 117 EGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKL 176
E +++ PE E+T ERQ ++ EEE PP KL+VGNLP D +L
Sbjct: 63 ETQITEQSVPEEEET---NKERQPKN-------EEEL--PPRRTKLYVGNLPRSCDIAQL 110
Query: 177 AMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMST 236
LF++ GTVE EV + N ET SRGF FVTMST
Sbjct: 111 TQLFQEFGTVESVEV--------------------------VRNEETGISRGFAFVTMST 144
Query: 237 VEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNAR 295
V+EA+ A+E D+ GR + VN A + E E ++++VGNL W V
Sbjct: 145 VKEAKSAIEKLQGSDLGGRDMIVNFPAKVLSKKKETDDSYIETPYQLFVGNLAWSVKKEI 204
Query: 296 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 355
L+ +FS+HG V A+V+Y + G R FGFV +SS++E+ DAI +L G+ GR ++V
Sbjct: 205 LKSLFSQHGNVSAAKVIYSGKGGVPRAFGFVCLSSQSEMEDAIVSLHGKEFHGRNLKVRQ 264
Query: 356 A 356
A
Sbjct: 265 A 265
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 104/230 (45%), Gaps = 50/230 (21%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAV 209
++ ++E P +LFVGNL + V E L LF + G V A
Sbjct: 181 DDSYIETP--YQLFVGNLAWSVKKEILKSLFSQHGNVSAA-------------------- 218
Query: 210 FYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRG--- 266
+VIY+ + R FGFV +S+ E E A+ H + GR L V +A P
Sbjct: 219 ------KVIYSGKGGVPRAFGFVCLSSQSEMEDAIVSLHGKEFHGRNLKVRQARPTSKDM 272
Query: 267 ------------------TQPERAPRVFE-PGFRIYVGNLPWEVDNARLEQVFSEHGKVV 307
+ E F + +YV NL V N L ++FS+HG V+
Sbjct: 273 VVSDVEENIAKPSTMVEDSMTETVKATFVGSAYGVYVSNLSLSVKNKALSELFSQHGNVL 332
Query: 308 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
+ARV+Y R+ GRSR +GFV SS+ E+ AIAALD + R + V A+
Sbjct: 333 DARVLYARKAGRSRPYGFVNFSSQAEVEAAIAALDKKEFYERKLVVKEAK 382
>gi|388493590|gb|AFK34861.1| unknown [Medicago truncatula]
Length = 285
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 116/213 (54%), Gaps = 35/213 (16%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
E E KL+ GNLPY VDS LA L E+ G+ E
Sbjct: 104 ETVAEVDTRTKLYFGNLPYSVDSALLAGLIEEYGSAE----------------------- 140
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN---KAAPRGT 267
L++V+Y+R+T +SRGF FVTMS VE+ ++ + GR L VN K P+
Sbjct: 141 ---LIEVLYDRDTGKSRGFAFVTMSCVEDCNAVIQNLDGKEFMGRTLRVNFSDKPKPK-- 195
Query: 268 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
P E ++++VGNL W V Q F EHG VV ARV++D ETG+ RG+GFV+
Sbjct: 196 ----EPLYPETEYKLFVGNLAWTVTFESFTQAFQEHGTVVGARVLFDGETGKFRGYGFVS 251
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
++++E++ A+A +D L+GR +RV++A+ ++
Sbjct: 252 YATKSEMDTALAIMDNVELEGRTLRVSLAQGKR 284
>gi|168054234|ref|XP_001779537.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669018|gb|EDQ55613.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 194
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 119/219 (54%), Gaps = 46/219 (21%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLP+ DS +LA + +VE +V +Y+
Sbjct: 1 KLYVGNLPWTCDSAQLAEICGDISSVEAVDV--------------------------VYD 34
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR--------------- 265
+++ RSRGF FVTMST E A+ ++ D GR L V+ PR
Sbjct: 35 QQSGRSRGFAFVTMSTNEGAQSVIDRLDGSDFGGRPLKVSFPQPRENRDNKPRFGNNERG 94
Query: 266 GTQPERAPR-----VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRS 320
+ +R PR V + ++++GNL W D L QVFSE+G VV+A+VVYDR+TG+S
Sbjct: 95 DRRSDRPPRQGSDRVLDNTNKMFIGNLSWSCDADALVQVFSEYGSVVDAKVVYDRDTGKS 154
Query: 321 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
RGFGFVTMS+ +E+++A+ LDG +GR +RV+ A +R
Sbjct: 155 RGFGFVTMSAASEVSNAVQNLDGAEFEGREMRVSEAGER 193
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 52/82 (63%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNLPW D+A+L ++ + V VVYD+++GRSRGF FVTMS+ I
Sbjct: 1 KLYVGNLPWTCDSAQLAEICGDISSVEAVDVVYDQQSGRSRGFAFVTMSTNEGAQSVIDR 60
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
LDG + GR ++V+ + R+ R
Sbjct: 61 LDGSDFGGRPLKVSFPQPRENR 82
>gi|297741610|emb|CBI32742.3| unnamed protein product [Vitis vinifera]
Length = 127
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 96/149 (64%), Gaps = 24/149 (16%)
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAP 273
+++VIY++ T RSRGFGFVTMSTVEE E A + F+ Y+++GR L VN P
Sbjct: 1 MVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPP--------- 51
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
P +N LE +FSE GKV ARV+YDRETGRSRGFGFVT +S E
Sbjct: 52 --------------PARRENT-LETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEE 96
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
+N AI +LDG +L+GR+IRV +AE R RR
Sbjct: 97 VNRAIESLDGVDLNGRSIRVTMAEARPRR 125
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
V+ +VIY+RET RSRGFGFVT ++ EE +A+E D++GR + V A R
Sbjct: 69 VTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEAR 122
>gi|110739563|dbj|BAF01690.1| 31 kDa RNA binding protein [Arabidopsis thaliana]
Length = 84
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 74/84 (88%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVGNLPW+VDN RLEQ+FSEHGKVV ARVVYDRETGRSRGFGFVTMS ELN+AI+AL
Sbjct: 1 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 60
Query: 342 DGQNLDGRAIRVNVAEDRQRRSSF 365
DGQNL+GRAIRVN AE+R R +
Sbjct: 61 DGQNLEGRAIRVNGAEERPPRRGY 84
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 32/113 (28%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNLP+DVD+ +L LF + G V A +V+Y+R
Sbjct: 1 VYVGNLPWDVDNGRLEQLFSEHGKVVEA--------------------------RVVYDR 34
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
ET RSRGFGFVTMS V+E +A+ +++GR + VN A ER PR
Sbjct: 35 ETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNGA------EERPPR 81
>gi|148908208|gb|ABR17219.1| unknown [Picea sitchensis]
Length = 296
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 110/207 (53%), Gaps = 31/207 (14%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAV 209
E E P KL+VGNLP DS +L LF++ GTVE AEV
Sbjct: 92 ENEEKSPSNRTKLYVGNLPRSCDSAQLTHLFQEFGTVESAEV------------------ 133
Query: 210 FYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP---RG 266
+ N ET SRGF FVTMSTV EA+ A+E D+ GR + VN A RG
Sbjct: 134 --------VRNEETGLSRGFAFVTMSTVIEAKAAIEKLQGSDLGGRDMIVNFPAAVLSRG 185
Query: 267 TQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
+ E E ++++ GNL W V N L +FSEHG V+ A+VVY+ + G R FGFV
Sbjct: 186 NKTE--DEYVETPYQLFAGNLAWSVKNEILRDLFSEHGTVLGAKVVYNSKGGVPRAFGFV 243
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRV 353
+SS++E+ AI +L+G+ GR + V
Sbjct: 244 CLSSQSEMEAAIVSLNGKEFHGRNLVV 270
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 48/74 (64%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNLP D+A+L +F E G V +A VV + ETG SRGF FVTMS+ E AI
Sbjct: 103 KLYVGNLPRSCDSAQLTHLFQEFGTVESAEVVRNEETGLSRGFAFVTMSTVIEAKAAIEK 162
Query: 341 LDGQNLDGRAIRVN 354
L G +L GR + VN
Sbjct: 163 LQGSDLGGRDMIVN 176
>gi|357111564|ref|XP_003557582.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 354
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 119/209 (56%), Gaps = 36/209 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E +++VGNLPY + +L +F +AG+V+ +Q+
Sbjct: 119 EPGRIYVGNLPYTFTAAELTSVFSEAGSVDD--------------------------VQI 152
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQ-------- 268
IY++ TDRSRGF FVTM+T EEA KAV+MF+ + GR + VN PRG +
Sbjct: 153 IYDKITDRSRGFAFVTMATAEEAAKAVQMFNGALLGGRTIRVNFPEVPRGGERAVASAAA 212
Query: 269 PERAPRVFEPG-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
+ + RV + G +++Y GNL W V L+ F ++ +RV+++R+TGRSRGFGFV+
Sbjct: 213 AKTSLRVVDDGTYKVYAGNLGWGVRADALKTAFEGQPGLLGSRVIFERDTGRSRGFGFVS 272
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVA 356
+ + N AI A+DG LDGR +R+++A
Sbjct: 273 FQTLEDANAAIQAMDGVELDGRPLRLSLA 301
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 265 RGTQPERAPRVF--EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
RG P R EPG RIYVGNLP+ A L VFSE G V + +++YD+ T RSRG
Sbjct: 105 RGYYPPRTRPALGQEPG-RIYVGNLPYTFTAAELTSVFSEAGSVDDVQIIYDKITDRSRG 163
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
F FVTM++ E A+ +G L GR IRVN E
Sbjct: 164 FAFVTMATAEEAAKAVQMFNGALLGGRTIRVNFPE 198
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 3/57 (5%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA---PRGTQP 269
+VI+ R+T RSRGFGFV+ T+E+A A++ ++DGR L ++ A+ P G+ P
Sbjct: 255 RVIFERDTGRSRGFGFVSFQTLEDANAAIQAMDGVELDGRPLRLSLASQNPPAGSTP 311
>gi|449437482|ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449528229|ref|XP_004171108.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 323
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 117/208 (56%), Gaps = 35/208 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E KL++GNLPY + S +L+ +F +AG +V +QV
Sbjct: 113 EAGKLYIGNLPYAMTSSQLSEVFAEAG--------------------------HVVSVQV 146
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPE-RAPRV 275
IY++ TDRSRGF FVTM+T+EEA++A+ MF I GR + VN PRG + E PR+
Sbjct: 147 IYDKVTDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMGPRI 206
Query: 276 -------FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
+ +IY GNL W + + L F +++A+++YDR +G+SRGFGFV+
Sbjct: 207 RSSYNKFVDSPHKIYAGNLGWGLTSQSLRDAFENQPGILSAKIIYDRASGKSRGFGFVSF 266
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVA 356
+ + A+ +++G ++GR +R+N+A
Sbjct: 267 ETAEDAESALESMNGVEVEGRPLRLNIA 294
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 55/77 (71%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++Y+GNLP+ + +++L +VF+E G VV+ +V+YD+ T RSRGF FVTM++ E +AI
Sbjct: 116 KLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKVTDRSRGFAFVTMATLEEAKEAIRM 175
Query: 341 LDGQNLDGRAIRVNVAE 357
DG + GR +RVN E
Sbjct: 176 FDGSQIGGRTVRVNFPE 192
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 28/112 (25%)
Query: 152 EFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFY 211
+FV+ P K++ GNL + + S+ L FE + A
Sbjct: 212 KFVDSPH--KIYAGNLGWGLTSQSLRDAFENQPGILSA---------------------- 247
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA 263
++IY+R + +SRGFGFV+ T E+AE A+E + +++GR L +N AA
Sbjct: 248 ----KIIYDRASGKSRGFGFVSFETAEDAESALESMNGVEVEGRPLRLNIAA 295
>gi|357137588|ref|XP_003570382.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 305
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 108/197 (54%), Gaps = 31/197 (15%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+ GNLPY+ DS LA + + T E+ EV +Y+
Sbjct: 134 KLYFGNLPYNCDSALLAGIVQDHATPEMVEV--------------------------LYD 167
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPG 279
R T RSRGF FVTMST+E+ E+ ++ GR + VN A +P+ + P E
Sbjct: 168 RTTGRSRGFAFVTMSTLEDCERVIKNLDGTLYSGRTMRVNMA----DKPKPKEPLYPETE 223
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+++VGNL W V L F + G VV ARV+YD ETGRSRG+GFV S++ E++ AI
Sbjct: 224 HKLFVGNLSWTVTPEMLTDAFQQCGDVVGARVLYDGETGRSRGYGFVCYSTKEEMDQAIE 283
Query: 340 ALDGQNLDGRAIRVNVA 356
L+G ++GR IRVN+A
Sbjct: 284 TLNGTEIEGREIRVNLA 300
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++Y GNLP+ D+A L + +H V+YDR TGRSRGF FVTMS+ + I
Sbjct: 134 KLYFGNLPYNCDSALLAGIVQDHATPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKN 193
Query: 341 LDGQNLDGRAIRVNVAE 357
LDG GR +RVN+A+
Sbjct: 194 LDGTLYSGRTMRVNMAD 210
>gi|359806610|ref|NP_001241528.1| uncharacterized protein LOC100820203 [Glycine max]
gi|255645445|gb|ACU23218.1| unknown [Glycine max]
gi|255645775|gb|ACU23380.1| unknown [Glycine max]
Length = 289
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 118/201 (58%), Gaps = 31/201 (15%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+ GNLPY VDS KLA L + G+ E L++V+Y+
Sbjct: 118 KLYFGNLPYSVDSAKLAGLIQDFGSAE--------------------------LIEVLYD 151
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPG 279
R+T +SRGF FVTMS +E+ +E + GR L VN + ++P+ + P E
Sbjct: 152 RDTGKSRGFAFVTMSCIEDCNAVIENLDGKEFLGRTLRVNFS----SKPKPKEPLYPETE 207
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+++VGNL W V N L Q F E+G VV ARV+YD ETGRSRG+GFV S++ E+ A+A
Sbjct: 208 HKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTKAEMEAALA 267
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
AL+ L+GRA+RV++A+ ++
Sbjct: 268 ALNDVELEGRAMRVSLAQGKR 288
>gi|242063480|ref|XP_002453029.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
gi|241932860|gb|EES06005.1| hypothetical protein SORBIDRAFT_04g037020 [Sorghum bicolor]
Length = 295
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 113/197 (57%), Gaps = 31/197 (15%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+ GNLPY+ DS +LA + ++ + E+ EV +Y+
Sbjct: 125 KLYFGNLPYNCDSAQLAGIVQEYASPEMVEV--------------------------LYD 158
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPG 279
R T RSRGF FVTM+TV++ E ++ GR + VN A +P+ + P E
Sbjct: 159 RITGRSRGFAFVTMTTVQDCELVIKNLDGSLYGGRTMKVNFA----DRPKPKLPLYPETE 214
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+++VGNL W V + L + F G VV ARV+YD ETGRSRG+GFV S++ E+++AI+
Sbjct: 215 HKLFVGNLSWTVTSEMLTEAFGRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDEAIS 274
Query: 340 ALDGQNLDGRAIRVNVA 356
+L+G L+GR IRVN+A
Sbjct: 275 SLNGTELEGREIRVNLA 291
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++Y GNLP+ D+A+L + E+ V+YDR TGRSRGF FVTM++ + I
Sbjct: 125 KLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRITGRSRGFAFVTMTTVQDCELVIKN 184
Query: 341 LDGQNLDGRAIRVNVAE 357
LDG GR ++VN A+
Sbjct: 185 LDGSLYGGRTMKVNFAD 201
>gi|326523287|dbj|BAJ88684.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 422
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 107/197 (54%), Gaps = 31/197 (15%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+ GNLPY+ DS LA + + E+ EV +Y+
Sbjct: 251 KLYFGNLPYNCDSALLAGIVQDHAVPEMVEV--------------------------LYD 284
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPG 279
R T RSRGF FVTMST+E+ E+ ++ GR + VN A +P+ +AP E
Sbjct: 285 RTTGRSRGFAFVTMSTLEDCERVIKNLDGTLYSGRTMRVNMA----DRPKPKAPLYPETE 340
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+++VGNL W V L F G VV ARV+YD ETGRSRG+GFV S++ E++ AI
Sbjct: 341 HKLFVGNLSWTVTPEMLTDAFQRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDQAIE 400
Query: 340 ALDGQNLDGRAIRVNVA 356
L+G ++GR IRVN+A
Sbjct: 401 TLNGTEIEGREIRVNLA 417
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++Y GNLP+ D+A L + +H V+YDR TGRSRGF FVTMS+ + I
Sbjct: 251 KLYFGNLPYNCDSALLAGIVQDHAVPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKN 310
Query: 341 LDGQNLDGRAIRVNVAE 357
LDG GR +RVN+A+
Sbjct: 311 LDGTLYSGRTMRVNMAD 327
>gi|326511132|dbj|BAJ87580.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 116/209 (55%), Gaps = 36/209 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E +++VGNLPY + +L F +AG+V+ +Q+
Sbjct: 106 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDD--------------------------VQI 139
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPERAP--- 273
IY++ TDRSRGF FVTM+T EEA KAV+MF+ + GR + VN PRG + A
Sbjct: 140 IYDKITDRSRGFAFVTMATAEEAAKAVQMFNGALLGGRTVRVNFPEVPRGGERAVASAAV 199
Query: 274 -----RVFEPG-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
RV + G +++Y GNL W V L+ F +V ARV+++R+TGRSRGFGFV+
Sbjct: 200 ARTSLRVVDDGTYKVYAGNLGWGVRADALKTAFEGQPGLVGARVIFERDTGRSRGFGFVS 259
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVA 356
+ + A+ A+DG LDGR +R+++A
Sbjct: 260 FHTIQDAKAALQAMDGVELDGRPLRLSLA 288
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 265 RGTQPERAPRVF--EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
RG P R EPG RIYVGNLP+ A L FSE G V + +++YD+ T RSRG
Sbjct: 92 RGYYPPRNRPALGQEPG-RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRG 150
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
F FVTM++ E A+ +G L GR +RVN E
Sbjct: 151 FAFVTMATAEEAAKAVQMFNGALLGGRTVRVNFPE 185
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 29/115 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K++ GNL + V ++ L FE G G V A +VI+
Sbjct: 213 KVYAGNLGWGVRADALKTAFE----------------GQPGL---VGA-------RVIFE 246
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA---PRGTQPERA 272
R+T RSRGFGFV+ T+++A+ A++ ++DGR L ++ AA P G+ P A
Sbjct: 247 RDTGRSRGFGFVSFHTIQDAKAALQAMDGVELDGRPLRLSLAAQNPPAGSTPSTA 301
>gi|3550485|emb|CAA11894.1| cp33Hv [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 116/209 (55%), Gaps = 36/209 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E +++VGNLPY + +L F +AG+V+ +Q+
Sbjct: 106 EPGRIYVGNLPYTFTAAELTAAFSEAGSVDD--------------------------VQI 139
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPERAP--- 273
IY++ TDRSRGF FVTM+T EEA KAV+MF+ + GR + VN PRG + A
Sbjct: 140 IYDKITDRSRGFAFVTMATAEEAAKAVQMFNGALLGGRTVRVNFPEVPRGGERAVASAAV 199
Query: 274 -----RVFEPG-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
RV + G +++Y GNL W V L+ F +V ARV+++R+TGRSRGFGFV+
Sbjct: 200 ARTSLRVVDDGTYKVYAGNLGWGVRADALKTAFEGQPGLVGARVIFERDTGRSRGFGFVS 259
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVA 356
+ + A+ A+DG LDGR +R+++A
Sbjct: 260 FHTIQDAKAALQAMDGVELDGRPLRLSLA 288
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
EPG RIYVGNLP+ A L FSE G V + +++YD+ T RSRGF FVTM++ E
Sbjct: 106 EPG-RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAK 164
Query: 337 AIAALDGQNLDGRAIRVNVAE 357
A+ +G L GR +RVN E
Sbjct: 165 AVQMFNGALLGGRTVRVNFPE 185
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 29/115 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K++ GNL + V ++ L FE G G V A +VI+
Sbjct: 213 KVYAGNLGWGVRADALKTAFE----------------GQPGL---VGA-------RVIFE 246
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA---PRGTQPERA 272
R+T RSRGFGFV+ T+++A+ A++ ++DGR L ++ AA P G+ P A
Sbjct: 247 RDTGRSRGFGFVSFHTIQDAKAALQAMDGVELDGRPLRLSLAAQNPPAGSTPSTA 301
>gi|133249|sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein, chloroplastic; Flags:
Precursor
gi|100390|pir||S12111 ribonucleoprotein, 33K, precursor - common tobacco
gi|20005|emb|CAA37879.1| unnamed protein product [Nicotiana tabacum]
Length = 324
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 117/214 (54%), Gaps = 35/214 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+L+VGNLP+ + S +L+ +F +AGTV E+ +Y
Sbjct: 114 GRLYVGNLPFSMTSSQLSEIFAEAGTVANVEI--------------------------VY 147
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPERAP---RV 275
+R TDRSRGF FVTM +VEEA++A+ +F + GR + VN PRG + E R
Sbjct: 148 DRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRS 207
Query: 276 FEPGF-----RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
GF ++YV NL W + + L F++ ++A+V+YDR +GRSRGFGF+T SS
Sbjct: 208 TYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSS 267
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
+N A+ ++ L+GR +R+NVA + SS
Sbjct: 268 AEAMNSALDTMNEVELEGRPLRLNVAGQKAPVSS 301
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 53/79 (67%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G R+YVGNLP+ + +++L ++F+E G V N +VYDR T RSRGF FVTM S E +AI
Sbjct: 113 GGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAI 172
Query: 339 AALDGQNLDGRAIRVNVAE 357
DG + GR ++VN E
Sbjct: 173 RLFDGSQVGGRTVKVNFPE 191
>gi|326487400|dbj|BAJ89684.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511469|dbj|BAJ87748.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511763|dbj|BAJ92026.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326514088|dbj|BAJ92194.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527877|dbj|BAJ88990.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326534068|dbj|BAJ89384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 107/197 (54%), Gaps = 31/197 (15%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+ GNLPY+ DS LA + + E+ EV +Y+
Sbjct: 135 KLYFGNLPYNCDSALLAGIVQDHAVPEMVEV--------------------------LYD 168
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPG 279
R T RSRGF FVTMST+E+ E+ ++ GR + VN A +P+ +AP E
Sbjct: 169 RTTGRSRGFAFVTMSTLEDCERVIKNLDGTLYSGRTMRVNMA----DRPKPKAPLYPETE 224
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+++VGNL W V L F G VV ARV+YD ETGRSRG+GFV S++ E++ AI
Sbjct: 225 HKLFVGNLSWTVTPEMLTDAFQRCGNVVGARVLYDGETGRSRGYGFVCYSTKEEMDQAIE 284
Query: 340 ALDGQNLDGRAIRVNVA 356
L+G ++GR IRVN+A
Sbjct: 285 TLNGTEIEGREIRVNLA 301
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++Y GNLP+ D+A L + +H V+YDR TGRSRGF FVTMS+ + I
Sbjct: 135 KLYFGNLPYNCDSALLAGIVQDHAVPEMVEVLYDRTTGRSRGFAFVTMSTLEDCERVIKN 194
Query: 341 LDGQNLDGRAIRVNVAE 357
LDG GR +RVN+A+
Sbjct: 195 LDGTLYSGRTMRVNMAD 211
>gi|311952|emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana sylvestris]
Length = 319
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 116/213 (54%), Gaps = 35/213 (16%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+L+VGNLP+ + S +L+ +F +AGTV E+ +Y+
Sbjct: 110 RLYVGNLPFSMTSSQLSEIFAEAGTVANVEI--------------------------VYD 143
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPERAP---RVF 276
R TDRSRGF FVTM +VEEA++A+ +F + GR + VN PRG + E R
Sbjct: 144 RVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRST 203
Query: 277 EPGF-----RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
GF ++YV NL W + + L F++ ++A+V+YDR +GRSRGFGF+T SS
Sbjct: 204 YQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSSA 263
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
+ A+ ++ L+GR +R+NVA + SS
Sbjct: 264 EAMKSALDTMNEVELEGRPLRLNVAGQKAPLSS 296
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 53/79 (67%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G R+YVGNLP+ + +++L ++F+E G V N +VYDR T RSRGF FVTM S E +AI
Sbjct: 108 GGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAI 167
Query: 339 AALDGQNLDGRAIRVNVAE 357
DG + GR ++VN E
Sbjct: 168 RLFDGSQVGGRTVKVNFPE 186
>gi|225463276|ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Vitis
vinifera]
Length = 311
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 120/213 (56%), Gaps = 39/213 (18%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E ++L+VGNLPY + S +L +F +AG+V E +
Sbjct: 101 EASRLYVGNLPYSMTSSQLGDVFNEAGSVISVE--------------------------I 134
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPERA---P 273
+Y+R TDRSRGF FVTM +V+EA++A+ MF + GR + VN PRG ERA P
Sbjct: 135 VYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGG--ERAVMGP 192
Query: 274 RV-------FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
++ + ++IY GNL W + + L F++H ++ A+V+Y+RE+GRSRGFGF+
Sbjct: 193 KIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADHPGLLGAKVIYERESGRSRGFGFL 252
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
+ +S A+ A++ ++GR +R+N+A R
Sbjct: 253 SFASAENAESALNAMNEVEVEGRPLRLNLAAVR 285
>gi|359481379|ref|XP_003632613.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 2 [Vitis
vinifera]
Length = 254
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 109/204 (53%), Gaps = 40/204 (19%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
D KLFVGNLP++VDS LA LFE+AG VE+ E L G Q L+V
Sbjct: 89 DLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEE----LEGRQ--------------LRV- 129
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP 278
S A + F + + R N PRG +
Sbjct: 130 ---------------NSGPPPARRENSNFRGENSNFRGENTNFRGPRGGANLNSTN---- 170
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
RIYVGNL W VD+ LE +FSE GKV ARV+YDRETGRSRGFGFVT +S E+N AI
Sbjct: 171 --RIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAI 228
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
+LDG +L+GR+IRV +AE R RR
Sbjct: 229 ESLDGVDLNGRSIRVTMAEARPRR 252
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 72/168 (42%), Gaps = 40/168 (23%)
Query: 112 GADETEGNLSDWGEPEGEDTVVEAG---ERQEES---GEEGVF--EEEEFVEPPEDAKL- 162
G E GN+ E EG V +G R+E S GE F E F P A L
Sbjct: 108 GLFEQAGNVEMVEELEGRQLRVNSGPPPARRENSNFRGENSNFRGENTNFRGPRGGANLN 167
Query: 163 -----FVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+VGNL + VD L LF + G V A +V
Sbjct: 168 STNRIYVGNLSWGVDDLALETLFSEQGKVTEA--------------------------RV 201
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
IY+RET RSRGFGFVT ++ EE +A+E D++GR + V A R
Sbjct: 202 IYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEAR 249
>gi|412986787|emb|CCO15213.1| predicted protein [Bathycoccus prasinos]
Length = 260
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 112/200 (56%), Gaps = 31/200 (15%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL++GNL +D+D + L LF + + S ++ +
Sbjct: 75 KLYIGNLSWDMDDQALNDLFSQ---------------------------YQASDCVIVTD 107
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP---RGTQPERAPRVFE 277
R T RSRGFGF T+ + E A+ A+ + D GR + V + P R + +R R ++
Sbjct: 108 RNTGRSRGFGFATVPSQEMADSAIAALNDSDQFGRQMRVVISLPPEERPAREQRPKRNWD 167
Query: 278 P-GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
G ++Y GNL W +D+ L+ + +E G V +R++ DRETGRSRGFGFVTMSSE E D
Sbjct: 168 ADGRKVYFGNLSWGMDHLDLQDLCAEFGNVDESRLITDRETGRSRGFGFVTMSSEKEAED 227
Query: 337 AIAALDGQNLDGRAIRVNVA 356
+A L+GQ++DGR +RVN+A
Sbjct: 228 VVAQLNGQDVDGRVLRVNIA 247
>gi|219363077|ref|NP_001137027.1| uncharacterized protein LOC100217196 [Zea mays]
gi|194698058|gb|ACF83113.1| unknown [Zea mays]
Length = 287
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 125/241 (51%), Gaps = 34/241 (14%)
Query: 120 LSDWGEPEGEDTVVEAGERQEESGEEGVFEEEE---FVEPPEDAKLFVGNLPYDVDSEKL 176
L D E E + E E QEE G ++ KL+ GNLPY+ DS +L
Sbjct: 73 LEDVAERGREVQLQEQDEVQEEGAAVGASSDDSGPSVAASTTTTKLYFGNLPYNCDSAQL 132
Query: 177 AMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMST 236
A + ++ + E+ EV +Y+R T RSRGF FVTM+T
Sbjct: 133 AGIVQEYASPEMVEV--------------------------LYDRTTGRSRGFAFVTMTT 166
Query: 237 VEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF-EPGFRIYVGNLPWEVDNAR 295
V++ E ++ GR + VN A +P+ ++ E +++VGNL W V +
Sbjct: 167 VQDCELVIKNLDGSLYGGRTMKVNFA----DRPKPKQALYPETEHKLFVGNLSWTVTSEM 222
Query: 296 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 355
L + F G VV ARV+YD ETGRSRG+GFV S+ E+++A+++L+G ++GR +RVN+
Sbjct: 223 LTEAFGRCGTVVGARVLYDGETGRSRGYGFVCYSTREEMDEALSSLNGMEMEGREMRVNL 282
Query: 356 A 356
A
Sbjct: 283 A 283
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++Y GNLP+ D+A+L + E+ V+YDR TGRSRGF FVTM++ + I
Sbjct: 117 KLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDCELVIKN 176
Query: 341 LDGQNLDGRAIRVNVAE 357
LDG GR ++VN A+
Sbjct: 177 LDGSLYGGRTMKVNFAD 193
>gi|413939453|gb|AFW74004.1| hypothetical protein ZEAMMB73_282165 [Zea mays]
Length = 287
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 112/197 (56%), Gaps = 31/197 (15%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+ GNLPY+ DS +LA + ++ + E+ EV +Y+
Sbjct: 117 KLYFGNLPYNCDSAQLAGIVQEYASPEMVEV--------------------------LYD 150
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF-EPG 279
R T RSRGF FVTM+TV++ E ++ GR + VN A +P+ ++ E
Sbjct: 151 RTTGRSRGFAFVTMTTVQDCELVIKNLDGSLYGGRTMKVNFA----DRPKPKQALYPETE 206
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+++VGNL W V + L + F G VV ARV+YD ETGRSRG+GFV S+ E+++A++
Sbjct: 207 HKLFVGNLSWTVTSEMLTEAFGRCGTVVGARVLYDGETGRSRGYGFVCYSTREEMDEALS 266
Query: 340 ALDGQNLDGRAIRVNVA 356
+L+G ++GR +RVN+A
Sbjct: 267 SLNGMEMEGREMRVNLA 283
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 47/77 (61%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++Y GNLP+ D+A+L + E+ V+YDR TGRSRGF FVTM++ + I
Sbjct: 117 KLYFGNLPYNCDSAQLAGIVQEYASPEMVEVLYDRTTGRSRGFAFVTMTTVQDCELVIKN 176
Query: 341 LDGQNLDGRAIRVNVAE 357
LDG GR ++VN A+
Sbjct: 177 LDGSLYGGRTMKVNFAD 193
>gi|303286031|ref|XP_003062305.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455822|gb|EEH53124.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 227
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 112/206 (54%), Gaps = 37/206 (17%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL + VD L +F A + S + VI +
Sbjct: 44 KLYVGNLSWGVDDSMLTDVF---------------------------AEYDASGIAVISD 76
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR-------GTQPERAP 273
T RSRGFGFV + + E AEKA+ D+DGR + VN + R G + ERAP
Sbjct: 77 MNTGRSRGFGFVEVPSQEIAEKAIAELDGADVDGRPIRVNISEARSSRREYDGERGERAP 136
Query: 274 RVFEPGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
R F ++Y GNL W +D+ L+ + E+G+V ++R++ DRETGRSRGFGFVTMSS
Sbjct: 137 RERNYDFDARKVYFGNLSWGMDHLDLQDLCGEYGEVADSRLITDRETGRSRGFGFVTMSS 196
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVA 356
+ + L+GQ++DGR +RVN+A
Sbjct: 197 AEQAEKVVNGLNGQDVDGRVLRVNIA 222
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W VD++ L VF+E+ V+ D TGRSRGFGFV + S+ AIA
Sbjct: 44 KLYVGNLSWGVDDSMLTDVFAEY-DASGIAVISDMNTGRSRGFGFVEVPSQEIAEKAIAE 102
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSSF 365
LDG ++DGR IRVN++E R R +
Sbjct: 103 LDGADVDGRPIRVNISEARSSRREY 127
>gi|308807591|ref|XP_003081106.1| Ps16 protein (ISS) [Ostreococcus tauri]
gi|116059568|emb|CAL55275.1| Ps16 protein (ISS) [Ostreococcus tauri]
Length = 1094
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 115/204 (56%), Gaps = 35/204 (17%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+++VGNL + V E LA LF + F V V+ +
Sbjct: 915 RVYVGNLSWGVTDESLAELFSE---------------------------FDVRDASVMKD 947
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP-- 278
RET RSRGF FV+M+ E+ E+A + ++DGR L V+KA + + ER R+
Sbjct: 948 RETGRSRGFAFVSMNNEEDVERASAALNGREVDGRELRVSKAQAQAERGERPMRMPRQRR 1007
Query: 279 ------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
G R+Y GNL W +D L+ + SE G V ++R++ DR+TGRSRGFGFVTMS+ T
Sbjct: 1008 DFDQAEGRRVYFGNLSWGMDQYDLQDLCSEFGSVEDSRLITDRDTGRSRGFGFVTMSNTT 1067
Query: 333 ELNDAIAALDGQNLDGRAIRVNVA 356
E ++ +A L+GQ++DGR +RVN+A
Sbjct: 1068 EADEVVAQLNGQDVDGRVLRVNIA 1091
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R+YVGNL W V + L ++FSE V +A V+ DRETGRSRGF FV+M++E ++ A AA
Sbjct: 915 RVYVGNLSWGVTDESLAELFSEF-DVRDASVMKDRETGRSRGFAFVSMNNEEDVERASAA 973
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
L+G+ +DGR +RV+ A+ + R
Sbjct: 974 LNGREVDGRELRVSKAQAQAER 995
>gi|356505441|ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 314
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 115/209 (55%), Gaps = 35/209 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+L+VGNLPY + + LA LF +AGTV E+ +Y
Sbjct: 105 GRLYVGNLPYSITNSALAELFGEAGTVASVEI--------------------------MY 138
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-----KAAPR---GTQPER 271
+R TDRSRGF FVTM VE+A++A+ MF + GR + VN K R G++
Sbjct: 139 DRVTDRSRGFAFVTMGNVEDAKEAIRMFDGSQVGGRTVKVNFPEVPKGGERLVMGSKIRN 198
Query: 272 APRVF-EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
+ R F + +IY GNL W + + L + F+E V++A+V+Y+R++GRSRGFGFV+ +
Sbjct: 199 SYRGFVDSPHKIYAGNLGWGLTSQGLREAFAEQPGVLSAKVIYERDSGRSRGFGFVSFET 258
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDR 359
A+ ++G + GR +R+N+AE R
Sbjct: 259 AESAQAALDIMNGVEVQGRPLRLNLAEAR 287
>gi|147769830|emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]
Length = 454
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 119/213 (55%), Gaps = 39/213 (18%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E ++L+VGNLPY + S +L +F +AG+V E+
Sbjct: 244 EASRLYVGNLPYSMTSSQLGXVFNEAGSVISVEI-------------------------- 277
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPERA---P 273
+Y+R TDRSRGF FVTM +V+EA++A+ MF + GR + VN PRG ERA P
Sbjct: 278 VYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGG--ERAVMGP 335
Query: 274 RV-------FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
++ + ++IY GNL W + + L F++ ++ A+V+Y+RE+GRSRGFGF+
Sbjct: 336 KIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADXPGLLGAKVIYERESGRSRGFGFL 395
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
+ +S A+ A+B ++GR +R+N+A R
Sbjct: 396 SFASAENAESALNAMBEVEVEGRPLRLNLAAVR 428
>gi|356572637|ref|XP_003554474.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 317
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 116/209 (55%), Gaps = 35/209 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+L+VGNLPY + + +L LF +AGTV E+ +Y
Sbjct: 108 GRLYVGNLPYSITNSELGELFGEAGTVASVEI--------------------------VY 141
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-----KAAPR---GTQPER 271
+R TDRSRGF FVTM +VE+A++A+ MF + GR + VN K R G++
Sbjct: 142 DRVTDRSRGFAFVTMGSVEDAKEAIRMFDGSQVGGRTVKVNFPEVPKGGERLVMGSKILN 201
Query: 272 APRVF-EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
+ R F + +IY GNL W + + L + F+E V++A+V+Y+R++GRSRGFGFV+ +
Sbjct: 202 SYRGFVDSPHKIYAGNLGWGLTSQGLREAFAEQPGVLSAKVIYERDSGRSRGFGFVSFET 261
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDR 359
A+ ++G + GR +R+N+AE R
Sbjct: 262 AESARAALDIMNGVEVQGRPLRLNLAEAR 290
>gi|356537206|ref|XP_003537120.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 298
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 122/232 (52%), Gaps = 46/232 (19%)
Query: 148 FEEEEFVEPPEDA-------KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQ 200
+ E F +P +A +LFVGNLPY + S +LA F +AG V E+
Sbjct: 69 LQRETFQKPEPNASHTNQSSRLFVGNLPYSLLSSQLAQRFGEAGNVVSVEI--------- 119
Query: 201 GFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN 260
+Y+ DRSRGF FVTM ++E+AE+A+ MF +I GR++ VN
Sbjct: 120 -----------------VYDDIMDRSRGFAFVTMGSMEDAERAIRMFDGSEIGGRIMKVN 162
Query: 261 KAAPRGTQPERAPRVFEP----GF-----RIYVGNLPWEVDNARLEQVFSEHGKVVNARV 311
A P+R R+ GF +IY GNL W + + L F+E ++A+V
Sbjct: 163 FTA----IPKRGKRLVMGSNYRGFVDSPHKIYAGNLGWGLTSQDLRDAFAEQPGFLSAKV 218
Query: 312 VYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 363
+Y+R +GRSRG+GFV+ + ++ A+ +++G + GR +R+N+A D+ S
Sbjct: 219 IYERNSGRSRGYGFVSFETAEDVEAALNSMNGVEVQGRPLRLNLATDKNTSS 270
>gi|17064758|gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [Arabidopsis thaliana]
Length = 329
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 144/298 (48%), Gaps = 72/298 (24%)
Query: 73 FVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGEDTV 132
F A +D+ ++ E+E EE G+E + T+
Sbjct: 66 FFCAAETEASSADDEIQASVEEEEEVEEEGDEGEEEVEEEKQTTQA-------------- 111
Query: 133 VEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVK 192
SGEEG +L+VGNLPY + S +L+ +F +AGT
Sbjct: 112 ---------SGEEG--------------RLYVGNLPYTITSSELSQIFGEAGT------- 141
Query: 193 FHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI 252
V +Q++Y++ TDRSRGFGFVTM ++EEA+ A++MF+ I
Sbjct: 142 -------------------VVDVQIVYDKVTDRSRGFGFVTMGSIEEAKGAMQMFNSSQI 182
Query: 253 DGRLLTVN-KAAPRGTQPE--------RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 303
GR + VN PRG + E + ++Y GNL W++ + L+ F +
Sbjct: 183 GGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWDLTSQGLKDAFGDQ 242
Query: 304 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
V+ A+V+Y+R TGRSRGFGF++ S + A+A ++G ++GRA+R+N+A +R++
Sbjct: 243 PGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASEREK 300
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 29/127 (22%)
Query: 153 FVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYV 212
+V+ P K++ GNL +D+ S+ L FG+Q +
Sbjct: 214 YVDSPH--KVYAGNLGWDLTSQGL-----------------KDAFGDQPGVLGA------ 248
Query: 213 SLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 272
+VIY R T RSRGFGF++ + E + A+ + +++GR L +N A+ R +P +
Sbjct: 249 ---KVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASER-EKPTVS 304
Query: 273 PRVFEPG 279
P E G
Sbjct: 305 PPSVEEG 311
>gi|15231200|ref|NP_190806.1| chloroplast RNA-binding protein 33 [Arabidopsis thaliana]
gi|681910|dbj|BAA06522.1| RNA-binding protein cp33 [Arabidopsis thaliana]
gi|4886289|emb|CAB43448.1| RNA-binding protein cp33 precursor [Arabidopsis thaliana]
gi|14517544|gb|AAK62662.1| AT3g52380/F22O6_240 [Arabidopsis thaliana]
gi|18700226|gb|AAL77723.1| AT3g52380/F22O6_240 [Arabidopsis thaliana]
gi|21553418|gb|AAM62511.1| RNA-binding protein cp33 [Arabidopsis thaliana]
gi|332645419|gb|AEE78940.1| chloroplast RNA-binding protein 33 [Arabidopsis thaliana]
Length = 329
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 144/298 (48%), Gaps = 72/298 (24%)
Query: 73 FVAQTSDWADQEEDKDNTTITLEQEQEENGEEEPNWENQGADETEGNLSDWGEPEGEDTV 132
F A +D+ ++ E+E EE G+E + T+
Sbjct: 66 FFCAAETEASSADDEIQASVEEEEEVEEEGDEGEEEVEEEKQTTQA-------------- 111
Query: 133 VEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVK 192
SGEEG +L+VGNLPY + S +L+ +F +AGT
Sbjct: 112 ---------SGEEG--------------RLYVGNLPYTITSSELSQIFGEAGT------- 141
Query: 193 FHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI 252
V +Q++Y++ TDRSRGFGFVTM ++EEA++A++MF+ I
Sbjct: 142 -------------------VVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQI 182
Query: 253 DGRLLTVN-KAAPRGTQPE--------RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 303
GR + VN PRG + E + ++Y GNL W + + L+ F +
Sbjct: 183 GGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAFGDQ 242
Query: 304 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
V+ A+V+Y+R TGRSRGFGF++ S + A+A ++G ++GRA+R+N+A +R++
Sbjct: 243 PGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASEREK 300
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV 275
+VIY R T RSRGFGF++ + E + A+ + +++GR L +N A+ R +P +P
Sbjct: 249 KVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASER-EKPTVSPPS 307
Query: 276 FEPG 279
E G
Sbjct: 308 VEEG 311
>gi|145348372|ref|XP_001418624.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578854|gb|ABO96917.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 151
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 96/148 (64%), Gaps = 10/148 (6%)
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF-- 276
+R T RSRGF FVT+++ E+ E+A+ + D+DGR L V++A G + +R R+
Sbjct: 1 MDRNTGRSRGFAFVTLASAEDMERAMAATNGVDVDGRELRVSQAQTAGERRDRPMRMDGE 60
Query: 277 --------EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
R+Y GNL W +D+ L+ + E G V ++R++ DRETGRSRGFGFVTM
Sbjct: 61 RRPQRNRDADNRRVYFGNLSWGMDHLDLQDLCGEFGSVEDSRLITDRETGRSRGFGFVTM 120
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVA 356
SSE E ++ +A L+GQ++DGR +RVN+A
Sbjct: 121 SSEAEADEVVAQLNGQDVDGRVLRVNIA 148
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 54/106 (50%), Gaps = 26/106 (24%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
++ +++ GNL + +D L L + G+VE + +
Sbjct: 69 ADNRRVYFGNLSWGMDHLDLQDLCGEFGSVEDS--------------------------R 102
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+I +RET RSRGFGFVTMS+ EA++ V + D+DGR+L VN A
Sbjct: 103 LITDRETGRSRGFGFVTMSSEAEADEVVAQLNGQDVDGRVLRVNIA 148
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 34/45 (75%)
Query: 313 YDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
DR TGRSRGF FVT++S ++ A+AA +G ++DGR +RV+ A+
Sbjct: 1 MDRNTGRSRGFAFVTLASAEDMERAMAATNGVDVDGRELRVSQAQ 45
>gi|414883567|tpg|DAA59581.1| TPA: hypothetical protein ZEAMMB73_267259 [Zea mays]
Length = 385
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 119/249 (47%), Gaps = 75/249 (30%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+ +LFVGNLPY SE+LA +F +AG V+ A Q+
Sbjct: 110 DPGRLFVGNLPYTYTSEELAQVFSEAGRVDDA--------------------------QI 143
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMF-----------------HRYDI-------- 252
IY++ T+RSRGF FVTM+T EEA KA++MF HR I
Sbjct: 144 IYDKVTNRSRGFAFVTMATAEEAAKAIQMFDGAVSTAPANWISTSTPHRIGILLLPMNVQ 203
Query: 253 -------------------DGRLLTVNKA-APRG----TQPERAPRVFEPGFRIYVGNLP 288
GR VN PRG T R + ++IY GNL
Sbjct: 204 ACVLTSDRSLAHSSPMQLLGGRTARVNYPEVPRGGERRTVTMSGRRRDDGTYKIYAGNLG 263
Query: 289 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 348
W V L VF +++ARV+++RETGRSRGFGFV+ S+ + A+ +LDG L+G
Sbjct: 264 WGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALESLDGVELEG 323
Query: 349 RAIRVNVAE 357
R++R+++AE
Sbjct: 324 RSLRLSLAE 332
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 271 RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
R PR +PG R++VGNLP+ + L QVFSE G+V +A+++YD+ T RSRGF FVTM++
Sbjct: 104 RPPRGDDPG-RLFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMAT 162
Query: 331 ETELNDAIAALDG 343
E AI DG
Sbjct: 163 AEEAAKAIQMFDG 175
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 31/116 (26%)
Query: 161 KLFVGNLPYDVDSEKLAMLFE-KAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
K++ GNL + V ++ L +FE +AG ++ +VI+
Sbjct: 256 KIYAGNLGWGVRADTLRNVFEGRAGLLDA---------------------------RVIF 288
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA---APRGTQPERA 272
RET RSRGFGFV+ ST E+A+ A+E +++GR L ++ A P G+ P A
Sbjct: 289 ERETGRSRGFGFVSFSTAEDAQAALESLDGVELEGRSLRLSLAEQNPPPGSPPSTA 344
>gi|242048706|ref|XP_002462099.1| hypothetical protein SORBIDRAFT_02g018650 [Sorghum bicolor]
gi|241925476|gb|EER98620.1| hypothetical protein SORBIDRAFT_02g018650 [Sorghum bicolor]
Length = 242
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 115/220 (52%), Gaps = 34/220 (15%)
Query: 142 SGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQG 201
S V E E V KL+VGN+P V +++L +F GTVE AEV
Sbjct: 52 SASSAVLEAPEVVAA---RKLYVGNVPRTVTNDELRDMFAAHGTVERAEV---------- 98
Query: 202 FHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNK 261
+Y++ T+RSR FGFVTMSTVEEA AVE + ++ GR + VN
Sbjct: 99 ----------------MYDKYTNRSRRFGFVTMSTVEEANAAVEALNGTEVGGRKIKVNV 142
Query: 262 A---APR--GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRE 316
P + PE P + +++YVGNL V L+ FSE GK+++A V +
Sbjct: 143 TESFLPNIDRSAPESEPVFVDSQYKVYVGNLAKNVTTEVLKNFFSEKGKILSATVSHIPG 202
Query: 317 TGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
T +S+G+GFVT SSE E+ A+A + L+G+ IRVN A
Sbjct: 203 TSKSKGYGFVTFSSEEEVEAAVATFNNAELEGQPIRVNRA 242
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 52/78 (66%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGN+P V N L +F+ HG V A V+YD+ T RSR FGFVTMS+ E N A+ A
Sbjct: 68 KLYVGNVPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTVEEANAAVEA 127
Query: 341 LDGQNLDGRAIRVNVAED 358
L+G + GR I+VNV E
Sbjct: 128 LNGTEVGGRKIKVNVTES 145
>gi|357440093|ref|XP_003590324.1| 33 kDa ribonucleoprotein [Medicago truncatula]
gi|355479372|gb|AES60575.1| 33 kDa ribonucleoprotein [Medicago truncatula]
Length = 311
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 117/216 (54%), Gaps = 31/216 (14%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
E + +LFVGNLP+ + S +LA LF +AG V E+
Sbjct: 103 ESTQSRRLFVGNLPFSLSSSQLAQLFGEAGNVVSVEI----------------------- 139
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN----KAAPRGTQPE 270
+Y+ T+RSRGF FVTM VE+AE+A+ MF + GR + VN + Q
Sbjct: 140 ---LYDDITNRSRGFAFVTMGNVEDAEEAIRMFDGTTVGGRAIKVNFPEVPIVGKRVQMG 196
Query: 271 RAPRVF-EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
R + + +IY GNL W++ + L + F++ +++A+VVY+R G+SRG+GFV+
Sbjct: 197 STYRGYVDSPHKIYAGNLGWDMTSQYLRKAFAKQPGLLSAKVVYERNNGKSRGYGFVSFE 256
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
+ ++ A++A++G + GR +R+ +A D ++ SS
Sbjct: 257 TAEDVEVALSAMNGVEVQGRPLRLKLAVDNRKPSSL 292
>gi|255639378|gb|ACU19985.1| unknown [Glycine max]
Length = 142
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 89/142 (62%), Gaps = 14/142 (9%)
Query: 234 MSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF------------- 280
MS+VEEAE A + F+ Y++DGR L VN P E APR
Sbjct: 1 MSSVEEAEAAAQQFNGYELDGRALRVNSGPPPARN-ESAPRFRGGSSFGSRGGGPSDSEN 59
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R++V NL W VDN L+ +F E G V+ AR +YDRE+GRSRGFGFVT SS E+N AI +
Sbjct: 60 RVHVSNLAWGVDNVALKSLFREQGNVLEARAIYDRESGRSRGFGFVTFSSPDEVNSAIQS 119
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
L+G +L+GRAIRV++A+ + ++
Sbjct: 120 LNGVDLNGRAIRVSLADSKPKQ 141
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 28/114 (24%)
Query: 157 PEDA--KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
P D+ ++ V NL + VD+ L LF + G V A
Sbjct: 54 PSDSENRVHVSNLAWGVDNVALKSLFREQGNVLEA------------------------- 88
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ 268
+ IY+RE+ RSRGFGFVT S+ +E A++ + D++GR + V+ A + Q
Sbjct: 89 -RAIYDRESGRSRGFGFVTFSSPDEVNSAIQSLNGVDLNGRAIRVSLADSKPKQ 141
>gi|115470657|ref|NP_001058927.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|34394882|dbj|BAC84331.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113610463|dbj|BAF20841.1| Os07g0158300 [Oryza sativa Japonica Group]
gi|125557292|gb|EAZ02828.1| hypothetical protein OsI_24955 [Oryza sativa Indica Group]
gi|215695203|dbj|BAG90394.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740788|dbj|BAG96944.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 348
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 114/208 (54%), Gaps = 34/208 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E +LFVGNLPY + S +++ F +AG V+ +Q+
Sbjct: 116 EPGRLFVGNLPYTMTSGEISQTFSEAGRVDN--------------------------VQI 149
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-APRGTQ-------P 269
IY++ TDRSRGF FVTM+T EEA A++MF+ + GR VN PRG +
Sbjct: 150 IYDKVTDRSRGFAFVTMATAEEAATAIQMFNGALLGGRTARVNYPEVPRGGERAVGSAAA 209
Query: 270 ERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
R R + F+IY GNL W V L F +++ARV+++R++GRSRGFGFV+
Sbjct: 210 TRENRRDDGTFKIYAGNLGWGVRADALRAAFEGQPGLLDARVIFERDSGRSRGFGFVSFR 269
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAE 357
+ + A+ ALDG L+GR +R+++AE
Sbjct: 270 TAEDAQAALEALDGVELEGRPLRLSMAE 297
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 264 PRGTQPERAPRVF--EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSR 321
PRG P R+ EPG R++VGNLP+ + + + Q FSE G+V N +++YD+ T RSR
Sbjct: 101 PRGYYPPRSRPALGQEPG-RLFVGNLPYTMTSGEISQTFSEAGRVDNVQIIYDKVTDRSR 159
Query: 322 GFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
GF FVTM++ E AI +G L GR RVN E
Sbjct: 160 GFAFVTMATAEEAATAIQMFNGALLGGRTARVNYPE 195
>gi|414883566|tpg|DAA59580.1| TPA: hypothetical protein ZEAMMB73_267259 [Zea mays]
Length = 277
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/146 (44%), Positives = 93/146 (63%), Gaps = 5/146 (3%)
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-APRG----TQPER 271
+IY++ T+RSRGF FVTM+T EEA KA++MF + GR VN PRG T
Sbjct: 79 IIYDKVTNRSRGFAFVTMATAEEAAKAIQMFDGALLGGRTARVNYPEVPRGGERRTVTMS 138
Query: 272 APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
R + ++IY GNL W V L VF +++ARV+++RETGRSRGFGFV+ S+
Sbjct: 139 GRRRDDGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTA 198
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAE 357
+ A+ +LDG L+GR++R+++AE
Sbjct: 199 EDAQAALESLDGVELEGRSLRLSLAE 224
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 31/116 (26%)
Query: 161 KLFVGNLPYDVDSEKLAMLFE-KAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
K++ GNL + V ++ L +FE +AG ++ +VI+
Sbjct: 148 KIYAGNLGWGVRADTLRNVFEGRAGLLDA---------------------------RVIF 180
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA---APRGTQPERA 272
RET RSRGFGFV+ ST E+A+ A+E +++GR L ++ A P G+ P A
Sbjct: 181 ERETGRSRGFGFVSFSTAEDAQAALESLDGVELEGRSLRLSLAEQNPPPGSPPSTA 236
>gi|118487510|gb|ABK95582.1| unknown [Populus trichocarpa]
Length = 198
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/157 (43%), Positives = 99/157 (63%), Gaps = 17/157 (10%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPERAPR 274
+VI +R TDRSRGFGFVTM +VEEA++A+ MF+ + GR L VN PRG + E
Sbjct: 20 EVICDRVTDRSRGFGFVTMESVEEAKEAIRMFNGSQVGGRTLRVNFPEVPRGGERE---- 75
Query: 275 VFEP-------GF-----RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
V EP GF +IY GNL W + + L F+ +++A+V+Y+R+TGRSRG
Sbjct: 76 VMEPRIRSGYKGFIDSEHKIYAGNLGWRLTSEGLGDAFANQPGLLSAKVIYERDTGRSRG 135
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
FGFV+ S A+ A++G+ +DGR +R+N+A +R
Sbjct: 136 FGFVSFDSAENAEAALEAMNGEEVDGRPLRLNLAGER 172
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 39/62 (62%)
Query: 296 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 355
L +VF E G+V A V+ DR T RSRGFGFVTM S E +AI +G + GR +RVN
Sbjct: 6 LAEVFEEAGRVFGAEVICDRVTDRSRGFGFVTMESVEEAKEAIRMFNGSQVGGRTLRVNF 65
Query: 356 AE 357
E
Sbjct: 66 PE 67
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
+VIY R+T RSRGFGFV+ + E AE A+E + ++DGR L +N A R P
Sbjct: 123 KVIYERDTGRSRGFGFVSFDSAENAEAALEAMNGEEVDGRPLRLNLAGERSYPP 176
>gi|397576490|gb|EJK50286.1| hypothetical protein THAOC_30767 [Thalassiosira oceanica]
Length = 397
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 111/209 (53%), Gaps = 34/209 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E AK++VGNL +D +E L FE+ G V L V
Sbjct: 194 EGAKIYVGNLNFDTTAEDLKAAFEEFGDV------------------------MDCFLPV 229
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA-PRVF 276
Y+ +RGFGF+ MS E++ KA+E + + DGR L VNK+ P+G +P A P+
Sbjct: 230 DYD---GNARGFGFIQMSD-EDSLKAIEGMNGVEFDGRTLNVNKSLPKGQRPAAAAPKET 285
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
++YVGNL W + L ++F E+G V++ + DRETG+ RGF FVTM + L
Sbjct: 286 ----KLYVGNLSWGTEEGALRELFGEYGSVIDCYIPTDRETGQHRGFAFVTMGPDDALR- 340
Query: 337 AIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
A DG LDGR +RVN A+ + +R+++
Sbjct: 341 AADETDGYELDGRILRVNEAQPKGQRNNY 369
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 84/153 (54%), Gaps = 7/153 (4%)
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
+ V +RET + RGF FV M+ ++ E A+E + +I GR + V+++ P+ E+ +
Sbjct: 126 VDVPLSRETGKCRGFAFVAMTNSDDHEAAIEQLNMSEIAGRTIYVSESLPKDQVAEKKKK 185
Query: 275 VF-----EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
+ G +IYVGNL ++ L+ F E G V++ + D + G +RGFGF+ MS
Sbjct: 186 FQGRKKRDEGAKIYVGNLNFDTTAEDLKAAFEEFGDVMDCFLPVDYD-GNARGFGFIQMS 244
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
E L AI ++G DGR + VN + + +R
Sbjct: 245 DEDSLK-AIEGMNGVEFDGRTLNVNKSLPKGQR 276
>gi|115478330|ref|NP_001062760.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|49387841|dbj|BAD26506.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|49388840|dbj|BAD26030.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|113630993|dbj|BAF24674.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|215695254|dbj|BAG90445.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737768|dbj|BAG96898.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641205|gb|EEE69337.1| hypothetical protein OsJ_28655 [Oryza sativa Japonica Group]
Length = 245
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 112/211 (53%), Gaps = 34/211 (16%)
Query: 154 VEPPEDA---KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
+E PE+ KL+VGN+P V +++LA +F GTVE AEV F
Sbjct: 61 LEAPEEVAARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMF----------------- 103
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA---APR-- 265
++ T RSR FGFVTMST EEA A+E + ++ GR + VN P
Sbjct: 104 ---------DKYTGRSRRFGFVTMSTPEEANAAIESLNETEVGGRKIKVNVTESFLPNID 154
Query: 266 GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 325
+ PE P + +++YVGNL V L+ FSE G+V++A V T +S+G+GF
Sbjct: 155 RSAPEPEPVFVDSQYKVYVGNLAKSVTTEMLKNFFSEKGEVLSATVSRIPGTAKSKGYGF 214
Query: 326 VTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
VT SSE E+ A++ + L+G+ IRVN A
Sbjct: 215 VTFSSEEEVQAAVSTFNNAELEGQPIRVNKA 245
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGN+P V N L +F++HG V A V++D+ TGRSR FGFVTMS+ E N AI +
Sbjct: 71 KLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEANAAIES 130
Query: 341 LDGQNLDGRAIRVNVAED 358
L+ + GR I+VNV E
Sbjct: 131 LNETEVGGRKIKVNVTES 148
>gi|388506424|gb|AFK41278.1| unknown [Lotus japonicus]
Length = 199
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 98/151 (64%), Gaps = 9/151 (5%)
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQP-ERA 272
++V+Y+R TDRSRGF FVTM +V++A++A+ MF + GR++ VN P+G +
Sbjct: 19 VEVMYDRVTDRSRGFAFVTMGSVDDAKEAIRMFDGSQVGGRIVRVNFPEVPKGGERLVMG 78
Query: 273 PRV-------FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 325
P++ + +IY GNL W V + L+ VF+E +V+A+V+Y+R++GRSRGFGF
Sbjct: 79 PKIRNNNRDFVDSSHKIYAGNLGWRVSSQDLKDVFAEQPGLVSAKVIYERDSGRSRGFGF 138
Query: 326 VTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
VT + ++ A+ ++G + GR +R+N+A
Sbjct: 139 VTFETAQDVEAALKTMNGVEVQGRELRLNLA 169
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 293 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 352
+++L ++F E G VV+ V+YDR T RSRGF FVTM S + +AI DG + GR +R
Sbjct: 3 SSQLTEIFVEAGTVVSVEVMYDRVTDRSRGFAFVTMGSVDDAKEAIRMFDGSQVGGRIVR 62
Query: 353 VNVAE 357
VN E
Sbjct: 63 VNFPE 67
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 28/106 (26%)
Query: 161 KLFVGNLPYDVDSEKLAMLF-EKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
K++ GNL + V S+ L +F E+ G V +VIY
Sbjct: 94 KIYAGNLGWRVSSQDLKDVFAEQPGLVS---------------------------AKVIY 126
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
R++ RSRGFGFVT T ++ E A++ + ++ GR L +N AA +
Sbjct: 127 ERDSGRSRGFGFVTFETAQDVEAALKTMNGVEVQGRELRLNLAAVK 172
>gi|20009|emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum]
Length = 292
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 103/192 (53%), Gaps = 35/192 (18%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+L+VGNLP+ + S +L+ +F +AGTV E+ +Y
Sbjct: 103 GRLYVGNLPFSMTSSQLSEIFAEAGTVANVEI--------------------------VY 136
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPERAP---RV 275
+R TDRSRGF FVTM +VEEA++A+ +F + GR + VN PRG + E R
Sbjct: 137 DRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFPEVPRGGEREVMSAKIRS 196
Query: 276 FEPGF-----RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
GF ++YV NL W + + L F++ ++A+V+YDR +GRSRGFGF+T SS
Sbjct: 197 TYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIYDRSSGRSRGFGFITFSS 256
Query: 331 ETELNDAIAALD 342
+ A+ ++
Sbjct: 257 AEAMKSALDTMN 268
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 53/79 (67%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G R+YVGNLP+ + +++L ++F+E G V N +VYDR T RSRGF FVTM S E +AI
Sbjct: 102 GGRLYVGNLPFSMTSSQLSEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAI 161
Query: 339 AALDGQNLDGRAIRVNVAE 357
DG + GR ++VN E
Sbjct: 162 RLFDGSQVGGRTVKVNFPE 180
>gi|255075095|ref|XP_002501222.1| predicted protein [Micromonas sp. RCC299]
gi|226516486|gb|ACO62480.1| predicted protein [Micromonas sp. RCC299]
Length = 199
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 111/221 (50%), Gaps = 36/221 (16%)
Query: 145 EGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHM 204
E E+ V E KL+VGNL + V ++ LA +F + G ++
Sbjct: 2 EAAAEDGAAVSGEEGVKLYVGNLSWGVTNDSLADVFNQYGASDVT--------------- 46
Query: 205 WVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP 264
V+ + T RSRGFGFVT+ A+ + D+DGR + VN +
Sbjct: 47 ------------VVTDMNTGRSRGFGFVTVPDQAVADACIAALDGADVDGRAIRVNVSVA 94
Query: 265 RGTQPERAPRVFEPGFR---------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDR 315
R +P R R G R +Y GNL W +D+ L+ + E G V +AR++ DR
Sbjct: 95 REDRPPRPDRPPRDGQRRGYDFDGRKVYFGNLSWGMDHLDLQDLCGEFGTVEDARLITDR 154
Query: 316 ETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
ET RSRGFGFVTMS+ E + + L+GQ++DGR +RVN+A
Sbjct: 155 ETNRSRGFGFVTMSTVAEAEEVVNQLNGQDVDGRVLRVNIA 195
>gi|75275079|sp|P82277.1|RRP2_SPIOL RecName: Full=30S ribosomal protein 2, chloroplastic; AltName:
Full=Plastid-specific 30S ribosomal protein 2;
Short=PSRP-2; Flags: Precursor
gi|7578881|gb|AAF64167.1|AF240462_1 plastid-specific ribosomal protein 2 precursor [Spinacia oleracea]
Length = 260
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 110/203 (54%), Gaps = 34/203 (16%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+L+VGN+P ++++++L + E+ G +EIAEV +Y+
Sbjct: 85 RLYVGNIPRNLNNDELRTIVEEHGAIEIAEV--------------------------MYD 118
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP-------RGTQPERAP 273
+ + RSR FGFVTM TVE+A +E + +I GR + VN TQ E +
Sbjct: 119 KYSGRSRRFGFVTMKTVEDANAVIEKLNDTEIGGRKIKVNITEKPLEGMDIATTQAEDSQ 178
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
V P +++Y+GNL V N L+ FSE GKV+ A+V T +S GFGFV+ SSE E
Sbjct: 179 FVESP-YKVYIGNLAKTVTNELLKDFFSEKGKVLGAKVQRTPGTSKSNGFGFVSFSSEEE 237
Query: 334 LNDAIAALDGQNLDGRAIRVNVA 356
+ AI AL+ L+G+ IRVN A
Sbjct: 238 VEAAIQALNNSVLEGQKIRVNKA 260
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R+YVGN+P ++N L + EHG + A V+YD+ +GRSR FGFVTM + + N I
Sbjct: 85 RLYVGNIPRNLNNDELRTIVEEHGAIEIAEVMYDKYSGRSRRFGFVTMKTVEDANAVIEK 144
Query: 341 LDGQNLDGRAIRVNVAE 357
L+ + GR I+VN+ E
Sbjct: 145 LNDTEIGGRKIKVNITE 161
>gi|326523691|dbj|BAJ93016.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 113/218 (51%), Gaps = 34/218 (15%)
Query: 147 VFEEEEFVEPPEDA---KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFH 203
V +E PE+ KL+VGN+P V +++L+ +F GTV AEV
Sbjct: 53 VLASSAVMEAPEELATRKLYVGNIPRTVTNDELSAMFAAHGTVVRAEV------------ 100
Query: 204 MWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA- 262
+Y++ + RSR FGFVTMST EE A+E + ++ GR + VN
Sbjct: 101 --------------MYDKYSGRSRRFGFVTMSTAEEVAAAIESLNDTEVGGRKIKVNVTE 146
Query: 263 --APR--GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 318
P + PE P + +++YVGNL +V L+ FSE G+V++A V T
Sbjct: 147 SFLPNIDASAPESEPSFVDSQYKVYVGNLAKKVTTEVLKNFFSEKGEVLSATVSRIPGTP 206
Query: 319 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
+S+G+GFVT SSE E+ A++ + L+G+ IRVN A
Sbjct: 207 KSKGYGFVTFSSEEEVEAAVSTFNNTELEGQTIRVNRA 244
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGN+P V N L +F+ HG VV A V+YD+ +GRSR FGFVTMS+ E+ AI +
Sbjct: 70 KLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRFGFVTMSTAEEVAAAIES 129
Query: 341 LDGQNLDGRAIRVNVAED 358
L+ + GR I+VNV E
Sbjct: 130 LNDTEVGGRKIKVNVTES 147
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 126/236 (53%), Gaps = 39/236 (16%)
Query: 137 ERQEESGEEGVFEEEEFVEPPED---AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKF 193
+R+ E +E + ++ + EP + LFVGN+ +++D + L FE
Sbjct: 191 KRKAEEVDEPIVKKSKVEEPAAEEGIKNLFVGNMSWNIDEDWLRREFE------------ 238
Query: 194 HFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDID 253
GF V +VI +RET R++GFG+V S +A KA + H Y++D
Sbjct: 239 -------GFGEIVG-------CRVITDRETGRAKGFGYVEFSNAADAAKAQKEMHEYELD 284
Query: 254 GRLLTVNKAAPRGTQPE-----RAPRVFE----PGFRIYVGNLPWEVDNARLEQVFSEHG 304
GR L V+ + PR +P+ RA + + P +++GN+ +E N +++VF+E+G
Sbjct: 285 GRQLNVDFSTPR-AKPDANGGARANKYGDKRSPPSNTLFLGNVSFECSNESIQEVFAEYG 343
Query: 305 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
+ + DR+TG +GFG+V SS+ E A+ AL+GQ++ GRAIR++ A R+
Sbjct: 344 SITRVSLPTDRDTGALKGFGYVDFSSQQEATAALEALNGQDIGGRAIRIDYATPRE 399
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 47/80 (58%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++VGN+ W +D L + F G++V RV+ DRETGR++GFG+V S+ + A +
Sbjct: 219 LFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFSNAADAAKAQKEM 278
Query: 342 DGQNLDGRAIRVNVAEDRQR 361
LDGR + V+ + R +
Sbjct: 279 HEYELDGRQLNVDFSTPRAK 298
>gi|296089370|emb|CBI39142.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 99/156 (63%), Gaps = 13/156 (8%)
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQPERA- 272
++++Y+R TDRSRGF FVTM +V+EA++A+ MF + GR + VN PRG ERA
Sbjct: 19 VEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGG--ERAV 76
Query: 273 --PRV-------FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGF 323
P++ + ++IY GNL W + + L F++H ++ A+V+Y+RE+GRSRGF
Sbjct: 77 MGPKIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADHPGLLGAKVIYERESGRSRGF 136
Query: 324 GFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
GF++ +S A+ A++ ++GR +R+N+A R
Sbjct: 137 GFLSFASAENAESALNAMNEVEVEGRPLRLNLAAVR 172
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 293 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 352
+++L VF+E G V++ +VYDR T RSRGF FVTM S E +AI DG + GR ++
Sbjct: 3 SSQLGDVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVK 62
Query: 353 VNVAE 357
VN E
Sbjct: 63 VNFPE 67
>gi|116790996|gb|ABK25816.1| unknown [Picea sitchensis]
Length = 248
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 111/201 (55%), Gaps = 33/201 (16%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+L+VGN+P +E+LA +F + G VE AEV +Y+
Sbjct: 74 RLYVGNIPRTSTNEELAKIFGECGNVEKAEV--------------------------MYD 107
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN------KAAPRGTQPERAPR 274
+ T RSR F FVTMSTVE+A+ A+E + +I GR++ VN + E A
Sbjct: 108 KYTKRSRRFAFVTMSTVEDAQAAIEKMNGTEIGGRVIKVNITEKPLDVSGLNRLTEEAEF 167
Query: 275 VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
+ P +++YVGNL V L++ F+E G V++A+V ETG+S G+GFV+ SSE ++
Sbjct: 168 IDSP-YKVYVGNLAKAVTTETLKKKFAEKGNVLDAKVTRIPETGKSGGYGFVSFSSEADV 226
Query: 335 NDAIAALDGQNLDGRAIRVNV 355
AI+A + L+G+ +RVNV
Sbjct: 227 EAAISAFNNVVLEGKPMRVNV 247
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R+YVGN+P N L ++F E G V A V+YD+ T RSR F FVTMS+ + AI
Sbjct: 74 RLYVGNIPRTSTNEELAKIFGECGNVEKAEVMYDKYTKRSRRFAFVTMSTVEDAQAAIEK 133
Query: 341 LDGQNLDGRAIRVNVAE 357
++G + GR I+VN+ E
Sbjct: 134 MNGTEIGGRVIKVNITE 150
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 123/237 (51%), Gaps = 39/237 (16%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAK----LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVK 192
+R+ E E ++ + VE P A+ LFVGNL +++D + L FE
Sbjct: 207 KRKAEEAAEPAIKKTKTVEEPAGAEGIKNLFVGNLSWNIDEDWLRREFE----------- 255
Query: 193 FHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI 252
GF V ++I +RET R +GFG+V +T +A KA H+Y++
Sbjct: 256 --------GFGEIVG-------CRIITDRETGRGKGFGYVEFATSADAAKAQAEMHQYEL 300
Query: 253 DGRLLTVNKAAPR-----GTQPERAPRVFE----PGFRIYVGNLPWEVDNARLEQVFSEH 303
DGR L V+ + PR G +RA + + P +++GNL ++ N ++++F+E+
Sbjct: 301 DGRPLNVDFSTPRQKPDAGKTNDRANKYGDKRSAPSNTLFLGNLSFDCTNDSIQEIFAEY 360
Query: 304 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
G + + DR+TG +GFG+V S+ E A+ AL+GQ++ GR IR++ A R+
Sbjct: 361 GNITRVSLPTDRDTGSIKGFGYVDFGSQEEATAALDALNGQDIAGRNIRIDYAAPRE 417
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++VGNL W +D L + F G++V R++ DRETGR +GFG+V ++ + A A +
Sbjct: 236 LFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDRETGRGKGFGYVEFATSADAAKAQAEM 295
Query: 342 DGQNLDGRAIRVNVAEDRQR 361
LDGR + V+ + RQ+
Sbjct: 296 HQYELDGRPLNVDFSTPRQK 315
>gi|118489861|gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 294
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 119/246 (48%), Gaps = 42/246 (17%)
Query: 125 EPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAG 184
P + + +E E EEEE E KLFV NLP+ + LF + G
Sbjct: 59 HPRSKSLCFQLCSTVQEVTMEITPEEEEIQEANLKRKLFVVNLPWSFSVVDIKDLFGQCG 118
Query: 185 TVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAV 244
TV E I ++ RSRGF FVTM+T EEA+ A+
Sbjct: 119 TVSDVE---------------------------IIKQKNGRSRGFAFVTMTTGEEAQAAI 151
Query: 245 EMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-----------FRIYVGNLPWEVDN 293
+ F+ ++ GR++ V + A R +P +PR+ PG ++Y+ NL W+V
Sbjct: 152 DKFNSLEVSGRIIRV-EFAKRLRRPP-SPRL--PGTPADIPAGETRHKLYISNLAWKVRG 207
Query: 294 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 353
+ L + FS + V++RVV+D GRS G+GFV+ ++ E AI+A G+ L GR IR+
Sbjct: 208 SHLREFFSTNCNPVSSRVVFDGPAGRSSGYGFVSFATREEAVAAISAFSGKELMGRPIRL 267
Query: 354 NVAEDR 359
+ED+
Sbjct: 268 KFSEDK 273
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++V NLPW ++ +F + G V + ++ ++ GRSRGF FVTM++ E AI
Sbjct: 95 KLFVVNLPWSFSVVDIKDLFGQCGTVSDVEII-KQKNGRSRGFAFVTMTTGEEAQAAIDK 153
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSS 364
+ + GR IRV A+ +R S
Sbjct: 154 FNSLEVSGRIIRVEFAKRLRRPPS 177
>gi|224138144|ref|XP_002326529.1| predicted protein [Populus trichocarpa]
gi|222833851|gb|EEE72328.1| predicted protein [Populus trichocarpa]
Length = 294
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 119/246 (48%), Gaps = 42/246 (17%)
Query: 125 EPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAG 184
P + + +E E EEEE E KLFV NLP+ + LF + G
Sbjct: 59 HPRSKSLCFQLCSTVQEVTVEITPEEEEIQEANLKRKLFVVNLPWSFSVVDIKDLFGQCG 118
Query: 185 TVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAV 244
TV E I ++ RSRGF FVTM+T EEA+ A+
Sbjct: 119 TVSDVE---------------------------IIKQKNGRSRGFAFVTMTTGEEAQAAI 151
Query: 245 EMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG-----------FRIYVGNLPWEVDN 293
+ F+ ++ GR++ V + A R +P +PR+ PG ++Y+ NL W+V
Sbjct: 152 DKFNSLEVSGRIIRV-EFAKRLRRPP-SPRL--PGTPADIPAGETRHKLYISNLAWKVRG 207
Query: 294 ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 353
+ L + FS + V++RVV+D GRS G+GFV+ ++ E AI+A G+ L GR IR+
Sbjct: 208 SHLREFFSTNCNPVSSRVVFDGPAGRSSGYGFVSFATREEAVAAISAFSGKELMGRPIRL 267
Query: 354 NVAEDR 359
+ED+
Sbjct: 268 KFSEDK 273
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++V NLPW ++ +F + G V + ++ ++ GRSRGF FVTM++ E AI
Sbjct: 95 KLFVVNLPWSFSVVDIKDLFGQCGTVSDVEII-KQKNGRSRGFAFVTMTTGEEAQAAIDK 153
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSS 364
+ + GR IRV A+ +R S
Sbjct: 154 FNSLEVSGRIIRVEFAKRLRRPPS 177
>gi|30693595|ref|NP_566958.3| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|79314769|ref|NP_001030841.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|17979394|gb|AAL49922.1| unknown protein [Arabidopsis thaliana]
gi|22136722|gb|AAM91680.1| unknown protein [Arabidopsis thaliana]
gi|332645382|gb|AEE78903.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332645383|gb|AEE78904.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 253
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 115/218 (52%), Gaps = 37/218 (16%)
Query: 149 EEEEFVEPPEDA--KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
E+ ++P +A ++++GN+P V +E+L L E+ G VE
Sbjct: 63 EKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVE------------------- 103
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-APR 265
+QV+Y++ + RSR FGF TM +VE+A VE + ++GR + VN P
Sbjct: 104 -------KVQVMYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKPI 156
Query: 266 GTQP-------ERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 318
+ P E + V P +++YVGNL V LE +FSE GKVV+A+V T
Sbjct: 157 ASSPDLSVLQSEDSAFVDSP-YKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTS 215
Query: 319 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
+S GFGFVT SSE ++ AI AL+ L+G+ IRVN A
Sbjct: 216 KSTGFGFVTFSSEEDVEAAIVALNNSLLEGQKIRVNKA 253
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 267 TQPERAPRVFEP----GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
T+ E P +P R+Y+GN+P V N +L ++ EHG V +V+YD+ +GRSR
Sbjct: 59 TETEEKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRR 118
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
FGF TM S + N + L+G ++GR I+VN+ E
Sbjct: 119 FGFATMKSVEDANAVVEKLNGNTVEGREIKVNITE 153
>gi|222423445|dbj|BAH19693.1| AT3G52150 [Arabidopsis thaliana]
Length = 253
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 115/218 (52%), Gaps = 37/218 (16%)
Query: 149 EEEEFVEPPEDA--KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
E+ ++P +A ++++GN+P V +E+L L E+ G VE
Sbjct: 63 EKPAALDPSSEAARRVYIGNIPRTVSNEQLTKLVEEHGAVE------------------- 103
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-APR 265
+QV+Y++ + RSR FGF TM +VE+A VE + ++GR + VN P
Sbjct: 104 -------KVQVMYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKPI 156
Query: 266 GTQP-------ERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 318
+ P E + V P +++YVGNL V LE +FSE GKVV+A+V T
Sbjct: 157 ASSPDLSVLQSEDSAFVDSP-YKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGTS 215
Query: 319 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
+S GFGFVT SSE ++ A+ AL+ L+G+ IRVN A
Sbjct: 216 KSTGFGFVTFSSEEDVEAAVVALNNSLLEGQKIRVNKA 253
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 267 TQPERAPRVFEP----GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
T+ E P +P R+Y+GN+P V N +L ++ EHG V +V+YD+ +GRSR
Sbjct: 59 TETEEKPAALDPSSEAARRVYIGNIPRTVSNEQLTKLVEEHGAVEKVQVMYDKYSGRSRR 118
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
FGF TM S + N + L+G ++GR I+VN+ E
Sbjct: 119 FGFATMKSVEDANAVVEKLNGNTVEGREIKVNITE 153
>gi|357157795|ref|XP_003577917.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like
[Brachypodium distachyon]
Length = 244
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 112/213 (52%), Gaps = 38/213 (17%)
Query: 154 VEPPEDA---KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
+E PE+ KL+VGN+P V +++L +F GTV A+V
Sbjct: 60 LEAPEELATRKLYVGNIPRTVTNDELRAMFADHGTVLRADV------------------- 100
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-------KAA 263
+Y++ + RSR FGFVTMS+VEEA A+E + ++ GR + VN
Sbjct: 101 -------MYDKYSGRSRRFGFVTMSSVEEANAAIESLNETEVGGRKIKVNVTESFLPNID 153
Query: 264 PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGF 323
P +PE P + +++YVGNL V L+ FSE G+V++A V T +S+G+
Sbjct: 154 PSAPEPE--PAFVDSQYKVYVGNLAKTVTTEVLKNFFSEKGEVLSATVSRIPGTPKSKGY 211
Query: 324 GFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
GFVT SSE E+ A++ + L+G+ IRVN A
Sbjct: 212 GFVTFSSEEEVEAAVSTFNNTELEGQPIRVNRA 244
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGN+P V N L +F++HG V+ A V+YD+ +GRSR FGFVTMSS E N AI +
Sbjct: 70 KLYVGNIPRTVTNDELRAMFADHGTVLRADVMYDKYSGRSRRFGFVTMSSVEEANAAIES 129
Query: 341 LDGQNLDGRAIRVNVAED 358
L+ + GR I+VNV E
Sbjct: 130 LNETEVGGRKIKVNVTES 147
>gi|326507732|dbj|BAJ86609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 100
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/86 (60%), Positives = 68/86 (79%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
F+ ++YVGNL W VDN+ LE +FSE GKV++A+V+YDR++GRSRGFGFVT S E+N
Sbjct: 10 FDSANKLYVGNLSWGVDNSTLENLFSEQGKVLDAKVIYDRDSGRSRGFGFVTYGSADEVN 69
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQR 361
+AI+ LDG +LDGR IRV VAE + R
Sbjct: 70 NAISNLDGVDLDGRQIRVTVAESKPR 95
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 28/107 (26%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL + VD+ L LF + G V A +VIY+
Sbjct: 15 KLYVGNLSWGVDNSTLENLFSEQGKVLDA--------------------------KVIYD 48
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL--TVNKAAPR 265
R++ RSRGFGFVT + +E A+ D+DGR + TV ++ PR
Sbjct: 49 RDSGRSRGFGFVTYGSADEVNNAISNLDGVDLDGRQIRVTVAESKPR 95
>gi|392592716|gb|EIW82042.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 589
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 107/205 (52%), Gaps = 34/205 (16%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FVG L ++VD++ LA F + G V A V+ +R
Sbjct: 335 IFVGRLSWNVDNDWLAKEFAECGEVVSATVQM--------------------------DR 368
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV------ 275
T RSRGFG+V ST E EKA+E+ + +IDGR + V+K+ P R R
Sbjct: 369 STGRSRGFGYVHFSTSEAVEKAIELNGK-EIDGRAVNVDKSNPPNKDASREKRAKTFGDT 427
Query: 276 -FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
P ++VGNL + +++ L + FSEHG+V N R+ DRE+GR +GFG+V S
Sbjct: 428 TSPPSATLFVGNLSFGMNDDALWEAFSEHGEVKNVRLPTDRESGRPKGFGYVEFSDVETA 487
Query: 335 NDAIAALDGQNLDGRAIRVNVAEDR 359
A AA+ G LDGR++R++ ++ R
Sbjct: 488 KKAHAAMQGVELDGRSVRLDFSQPR 512
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 114/228 (50%), Gaps = 32/228 (14%)
Query: 136 GERQ-EESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFH 194
G+R+ EE + + + E E +FVG L ++VD++ LA F+ GTV A V+
Sbjct: 85 GKRKAEEPAQTPAKKAKTDTEAGESNTVFVGRLSWNVDNDWLAQEFQGCGTVVAARVQM- 143
Query: 195 FLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDG 254
+R + +SRGF +V S+ EA+KAVE + IDG
Sbjct: 144 -------------------------DRNSGKSRGFAYVEFSSPAEAQKAVEEMNGKQIDG 178
Query: 255 RLLTVNKAAPRGTQPERAPRVF-----EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNA 309
R + V+ + PR PE+ +VF +P ++VGNL W L F E G V +
Sbjct: 179 REVNVDISQPRQPNPEKRAQVFGDSESQPSTTLFVGNLSWNTTEDGLWTAFGEFGDVTHV 238
Query: 310 RVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
R+ D+E+G+ +GFG+V + A A+ G++LDGR +R++ ++
Sbjct: 239 RLPTDQESGKPKGFGYVEFGDQEGATKAYEAMKGKDLDGRTLRLDYSQ 286
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++VG L W VDN L Q F G VV ARV DR +G+SRGF +V SS E A+ +
Sbjct: 112 VFVGRLSWNVDNDWLAQEFQGCGTVVAARVQMDRNSGKSRGFAYVEFSSPAEAQKAVEEM 171
Query: 342 DGQNLDGRAIRVNVAEDRQ 360
+G+ +DGR + V++++ RQ
Sbjct: 172 NGKQIDGREVNVDISQPRQ 190
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 105/206 (50%), Gaps = 31/206 (15%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
+ +FVG L ++VD E L FE G V A V+
Sbjct: 390 NCNIFVGKLSWNVDDEWLKSEFEACGEVVRASVQM------------------------- 424
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP 278
+R+T RS+GFG+V+ ST E AEKA+ + +IDGR + VN A P+ P + F
Sbjct: 425 -DRQTGRSKGFGYVSFSTPEAAEKAIAEMNGKEIDGRAVNVNAATPKTPNPAGRAKQFGD 483
Query: 279 GFR-----IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
++VGN+ + + L + F EHG +V+ R+ DRETG+ +GFG+V +S
Sbjct: 484 TVSAESKVLFVGNVSFNANEDMLWETFGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVEN 543
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDR 359
A AL+G+++ GR IR++ ++ R
Sbjct: 544 AKSAFNALNGKDIAGRNIRLDFSQPR 569
>gi|449436259|ref|XP_004135910.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cucumis
sativus]
gi|449489082|ref|XP_004158209.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cucumis
sativus]
Length = 251
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 109/204 (53%), Gaps = 35/204 (17%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL++GN+P +V++E+L + ++ G VE AEV +Y+
Sbjct: 75 KLYIGNIPRNVNNEELTRIVQEHGAVEKAEV--------------------------MYD 108
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL--------TVNKAAPRGTQPERA 272
+ + RSR F FVTM TVE+A A+E + ++ GR + VN Q E +
Sbjct: 109 KYSGRSRRFAFVTMKTVEDANAAIEKLNETEVGGRKIKVNITEKPVVNTVDMSFLQAEES 168
Query: 273 PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
+ P +++YVGN+ V L+ FSE GKV++A+V T +S G+GFVT SSE
Sbjct: 169 QFIDSP-YKVYVGNISSTVSTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEE 227
Query: 333 ELNDAIAALDGQNLDGRAIRVNVA 356
E++ AI++ + L+G+ IRVN A
Sbjct: 228 EVDAAISSFNNALLEGQPIRVNKA 251
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 50/77 (64%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++Y+GN+P V+N L ++ EHG V A V+YD+ +GRSR F FVTM + + N AI
Sbjct: 75 KLYIGNIPRNVNNEELTRIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDANAAIEK 134
Query: 341 LDGQNLDGRAIRVNVAE 357
L+ + GR I+VN+ E
Sbjct: 135 LNETEVGGRKIKVNITE 151
>gi|226288243|gb|EEH43755.1| 28 kDa ribonucleoprotein [Paracoccidioides brasiliensis Pb18]
Length = 492
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 118/234 (50%), Gaps = 36/234 (15%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFL 196
+R+ E EE V ++ VEP E LF+GNL ++VD E L FE+ G E+A V+
Sbjct: 224 KRKAEDEEEVVAPKKTKVEPTEGGNLFIGNLSWNVDEEWLRSEFEEFG--ELAGVR---- 277
Query: 197 FGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRL 256
++ +R+T RS+GFG+V + E+A KA ++DGR
Sbjct: 278 --------------------IVTDRDTGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRK 317
Query: 257 LTVN------KAAPRGTQPERAPRVFEP----GFRIYVGNLPWEVDNARLEQVFSEHGKV 306
L V+ AAPR RA + +++GN+ + D + + F+E+G +
Sbjct: 318 LNVDFANARSNAAPRDRAQSRAQNFGDQRSPESDTLFIGNIAFSADENMISETFAEYGSI 377
Query: 307 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
+ R+ D E+GR +GFG+V SS E A +L+G L GRA+R++ + RQ
Sbjct: 378 LGVRLPTDPESGRPKGFGYVQFSSIDEARSAFESLNGSELAGRAMRLDFSTPRQ 431
>gi|295672357|ref|XP_002796725.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283705|gb|EEH39271.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 474
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 119/234 (50%), Gaps = 36/234 (15%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFL 196
+R+ E EE V ++ VEP E LF+GNL ++VD E L FE+ G E+A V+
Sbjct: 208 KRKAEDEEEVVAPKKTRVEPTEGGNLFIGNLSWNVDEEWLRSEFEEFG--ELAGVR---- 261
Query: 197 FGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRL 256
++ +R++ RS+GFG+V + E+A KA ++DGR
Sbjct: 262 --------------------IVTDRDSGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRK 301
Query: 257 LTVN------KAAPRGTQPERAPRVFEPGF----RIYVGNLPWEVDNARLEQVFSEHGKV 306
L V+ AAPR RA + +++GN+ + D + + + F+E+G +
Sbjct: 302 LNVDFANARSNAAPRDRAQSRAQNFGDQKSPESDTLFIGNIAFSADESMISETFAEYGSI 361
Query: 307 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
+ R+ D E+GR +GFG+V SS E A +L+G L GRA+R++ + RQ
Sbjct: 362 LGVRLPTDPESGRPKGFGYVQFSSIDEARSAFESLNGSELAGRAMRLDFSTPRQ 415
>gi|147859670|emb|CAN83111.1| hypothetical protein VITISV_026573 [Vitis vinifera]
Length = 355
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 87/171 (50%), Gaps = 35/171 (20%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
EE E P + KL+ GNLPY DS LA + + G+ E+ EV
Sbjct: 57 EEGAESPVNTKLYFGNLPYSCDSAHLAGIIQNYGSPELVEV------------------- 97
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN---KAAPRGT 267
+Y+R+T RSRGF FVTMS+VE+ +E + GR L VN K P+
Sbjct: 98 -------LYDRDTGRSRGFAFVTMSSVEDCNAVIENLDGSEYGGRTLRVNFSDKPKPK-- 148
Query: 268 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 318
P E ++++VGNL W V + L QVF E+G V+ ARV+YD ETG
Sbjct: 149 ----LPLYPETEYKLFVGNLSWSVTSESLNQVFQEYGNVIGARVLYDGETG 195
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++Y GNLP+ D+A L + +G V+YDR+TGRSRGF FVTMSS + N I
Sbjct: 67 KLYFGNLPYSCDSAHLAGIIQNYGSPELVEVLYDRDTGRSRGFAFVTMSSVEDCNAVIEN 126
Query: 341 LDGQNLDGRAIRVNVAE 357
LDG GR +RVN ++
Sbjct: 127 LDGSEYGGRTLRVNFSD 143
>gi|125599171|gb|EAZ38747.1| hypothetical protein OsJ_23149 [Oryza sativa Japonica Group]
Length = 220
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/154 (42%), Positives = 94/154 (61%), Gaps = 8/154 (5%)
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGTQ-- 268
V +Q+IY++ TDRSRGF FVTM+T EEA A++MF+ + GR VN PRG +
Sbjct: 16 VDNVQIIYDKVTDRSRGFAFVTMATAEEAATAIQMFNGALLGGRTARVNYPEVPRGGERA 75
Query: 269 -----PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGF 323
R R + F+IY GNL W V L F +++ARV+++R++GRSRGF
Sbjct: 76 VGSAAATRENRRDDGTFKIYAGNLGWGVRADALRAAFEGQPGLLDARVIFERDSGRSRGF 135
Query: 324 GFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
GFV+ + + A+ ALDG L+GR +R+++AE
Sbjct: 136 GFVSFRTAEDAQAALEALDGVELEGRPLRLSMAE 169
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%)
Query: 296 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 355
+ Q FSE G+V N +++YD+ T RSRGF FVTM++ E AI +G L GR RVN
Sbjct: 6 ISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVTMATAEEAATAIQMFNGALLGGRTARVNY 65
Query: 356 AE 357
E
Sbjct: 66 PE 67
>gi|357457543|ref|XP_003599052.1| 30S ribosomal protein [Medicago truncatula]
gi|355488100|gb|AES69303.1| 30S ribosomal protein [Medicago truncatula]
Length = 235
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 113/215 (52%), Gaps = 31/215 (14%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
V E+ V+ P KL+VGN+P V +++L + ++ G VE AEV
Sbjct: 47 VSSEQATVDSPALRKLYVGNIPRTVSNDELEKIVQEHGAVEKAEV--------------- 91
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-APR 265
+Y++ + RSR F FVTM TVE+A A E + +I GR + VN P
Sbjct: 92 -----------MYDKYSKRSRRFAFVTMKTVEDANAAAEKLNGTEIGGREIKVNITEKPL 140
Query: 266 GTQ--PERA--PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSR 321
T+ P +A + +++YVGNL V + L++ FSE G ++A+V T +S
Sbjct: 141 TTEGLPVQAGESTFVDSPYKVYVGNLAKNVTSDSLKKFFSEKGNALSAKVSRAPGTSKSS 200
Query: 322 GFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
GFGFVT SS+ ++ AI++ + L+G+ IRVN A
Sbjct: 201 GFGFVTFSSDEDVEAAISSFNNALLEGQKIRVNKA 235
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 278 PGFR-IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
P R +YVGN+P V N LE++ EHG V A V+YD+ + RSR F FVTM + + N
Sbjct: 57 PALRKLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTMKTVEDANA 116
Query: 337 AIAALDGQNLDGRAIRVNVAE 357
A L+G + GR I+VN+ E
Sbjct: 117 AAEKLNGTEIGGREIKVNITE 137
>gi|681904|dbj|BAA06519.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 326
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 65/85 (76%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R+YVGNL W VD+ LE +F+E GKVV ARV+YDR++GRS+GFGFVT+SS E+ AI +
Sbjct: 242 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 301
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSSF 365
L+G +LDGR IRV+ AE R R F
Sbjct: 302 LNGADLDGRQIRVSEAEARPPRGQF 326
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
F P +++VGNL + VD+A+L Q+F G V V+YD+ TGRSRGFGFVTMS+ E+
Sbjct: 87 FSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVE 146
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRR 362
A +G +GR +RVN +R
Sbjct: 147 AAAQQFNGYEFEGRPLRVNAGPPPPKR 173
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 63/119 (52%), Gaps = 29/119 (24%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
D KLFVGNL ++VDS +LA LFE AG VE+ EV I
Sbjct: 90 DLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEV--------------------------I 123
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE---RAPR 274
Y++ T RSRGFGFVTMST E E A + F+ Y+ +GR L VN P + E R PR
Sbjct: 124 YDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRGPR 182
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 29/109 (26%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+L+VGNL + VD L LF + G V A +VIY+
Sbjct: 242 RLYVGNLSWGVDDMALENLFNEQGKVVEA--------------------------RVIYD 275
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA---APRG 266
R++ RS+GFGFVT+S+ +E +KA+ + D+DGR + V++A PRG
Sbjct: 276 RDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPRG 324
>gi|15231817|ref|NP_190914.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|186511018|ref|NP_850692.2| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|334185948|ref|NP_001190078.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|30316379|sp|Q43349.2|ROC2_ARATH RecName: Full=29 kDa ribonucleoprotein, chloroplastic; AltName:
Full=RNA-binding protein cp29; Flags: Precursor
gi|6729497|emb|CAB67653.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
gi|14532570|gb|AAK64013.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|18655393|gb|AAL76152.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gi|21593426|gb|AAM65393.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
gi|332645568|gb|AEE79089.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645569|gb|AEE79090.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645570|gb|AEE79091.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
Length = 342
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 65/85 (76%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R+YVGNL W VD+ LE +F+E GKVV ARV+YDR++GRS+GFGFVT+SS E+ AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSSF 365
L+G +LDGR IRV+ AE R R F
Sbjct: 318 LNGADLDGRQIRVSEAEARPPRGQF 342
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
F P +++VGNL + VD+A+L Q+F G V V+YD+ TGRSRGFGFVTMS+ E+
Sbjct: 95 FSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVE 154
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRR 362
A +G +GR +RVN +R
Sbjct: 155 AAAQQFNGYEFEGRPLRVNAGPPPPKR 181
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 63/119 (52%), Gaps = 29/119 (24%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
D KLFVGNL ++VDS +LA LFE AG VE+ EV I
Sbjct: 98 DLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEV--------------------------I 131
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE---RAPR 274
Y++ T RSRGFGFVTMST E E A + F+ Y+ +GR L VN P + E R PR
Sbjct: 132 YDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 29/109 (26%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+L+VGNL + VD L LF + G V A +VIY+
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEA--------------------------RVIYD 291
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA---APRG 266
R++ RS+GFGFVT+S+ +E +KA+ + D+DGR + V++A PRG
Sbjct: 292 RDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPRG 340
>gi|681902|dbj|BAA06518.1| RNA-binding protein cp29 [Arabidopsis thaliana]
Length = 334
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 65/85 (76%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R+YVGNL W VD+ LE +F+E GKVV ARV+YDR++GRS+GFGFVT+SS E+ AI +
Sbjct: 250 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 309
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSSF 365
L+G +LDGR IRV+ AE R R F
Sbjct: 310 LNGADLDGRQIRVSEAEARPPRGQF 334
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
F P +++VGNL + VD+A+L Q+F G V V+YD+ TGRSRGFGFVTMS+ E+
Sbjct: 95 FSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVE 154
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRR 362
A +G +GR +RVN +R
Sbjct: 155 AAAQQFNGYEFEGRPLRVNAGPPPPKR 181
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 63/119 (52%), Gaps = 29/119 (24%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
D KLFVGNL ++VDS +LA LFE AG VE+ EV I
Sbjct: 98 DLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEV--------------------------I 131
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE---RAPR 274
Y++ T RSRGFGFVTMST E E A + F+ Y+ +GR L VN P + E R PR
Sbjct: 132 YDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 29/109 (26%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+L+VGNL + VD L LF + G V A +VIY+
Sbjct: 250 RLYVGNLSWGVDDMALENLFNEQGKVVEA--------------------------RVIYD 283
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA---APRG 266
R++ RS+GFGFVT+S+ +E +KA+ + D+DGR + V++A PRG
Sbjct: 284 RDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPRG 332
>gi|297820076|ref|XP_002877921.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata]
gi|297323759|gb|EFH54180.1| hypothetical protein ARALYDRAFT_348440 [Arabidopsis lyrata subsp.
lyrata]
Length = 339
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 65/85 (76%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R+YVGNL W VD+ LE +F+E GKVV ARV+YDR++GRS+GFGFVT+SS E+ AI +
Sbjct: 255 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 314
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSSF 365
L+G +LDGR IRV+ AE R R F
Sbjct: 315 LNGADLDGRQIRVSEAEARPPRGQF 339
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
F P +++VGNL + VD+A+L Q+F G V V+YD+ TGRSRGFGFVTMS+ E+
Sbjct: 95 FSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVE 154
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRR 362
A +G +GR +RVN +R
Sbjct: 155 AAAQQFNGYEFEGRPLRVNAGPPPPKR 181
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 63/119 (52%), Gaps = 29/119 (24%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
D KLFVGNL ++VDS +LA LFE AG VE+ EV I
Sbjct: 98 DLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEV--------------------------I 131
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE---RAPR 274
Y++ T RSRGFGFVTMST E E A + F+ Y+ +GR L VN P + E R PR
Sbjct: 132 YDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 29/109 (26%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+L+VGNL + VD L LF + G V A +VIY+
Sbjct: 255 RLYVGNLSWGVDDMALENLFNEQGKVVEA--------------------------RVIYD 288
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA---APRG 266
R++ RS+GFGFVT+S+ +E +KA+ + D+DGR + V++A PRG
Sbjct: 289 RDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPRG 337
>gi|334185950|ref|NP_001190079.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
gi|332645571|gb|AEE79092.1| chloroplast RNA-binding protein 29 [Arabidopsis thaliana]
Length = 363
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 65/85 (76%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R+YVGNL W VD+ LE +F+E GKVV ARV+YDR++GRS+GFGFVT+SS E+ AI +
Sbjct: 279 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 338
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSSF 365
L+G +LDGR IRV+ AE R R F
Sbjct: 339 LNGADLDGRQIRVSEAEARPPRGQF 363
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 53/108 (49%), Gaps = 21/108 (19%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS----- 330
F P +++VGNL + VD+A+L Q+F G V V+YD+ TGRSRGFGFVTMS+
Sbjct: 95 FSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVE 154
Query: 331 ----------------ETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
L I L G +GR +RVN +R
Sbjct: 155 AAAQQFNGYVSRYLCSLLCLYLLIRVLCGLEFEGRPLRVNAGPPPPKR 202
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 50/92 (54%), Gaps = 26/92 (28%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
D KLFVGNL ++VDS +LA LFE AG VE+ EV I
Sbjct: 98 DLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEV--------------------------I 131
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRY 250
Y++ T RSRGFGFVTMST E E A + F+ Y
Sbjct: 132 YDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGY 163
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 29/109 (26%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+L+VGNL + VD L LF + G V A +VIY+
Sbjct: 279 RLYVGNLSWGVDDMALENLFNEQGKVVEA--------------------------RVIYD 312
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA---APRG 266
R++ RS+GFGFVT+S+ +E +KA+ + D+DGR + V++A PRG
Sbjct: 313 RDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPRG 361
>gi|388508598|gb|AFK42365.1| unknown [Medicago truncatula]
Length = 235
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 112/213 (52%), Gaps = 31/213 (14%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
V E+ V+ P KL+VGN+P V +++L + ++ G VE AEV
Sbjct: 47 VSSEQATVDSPALRKLYVGNIPRTVSNDELEKIVQEHGAVEKAEV--------------- 91
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-APR 265
+Y++ + RSR F FVTM TVE+A A E + +I GR + VN P
Sbjct: 92 -----------MYDKYSKRSRRFAFVTMKTVEDANAAAEKLNGTEIGGREIKVNITEKPL 140
Query: 266 GTQ--PERA--PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSR 321
T+ P +A + +++YVGNL V + L++ FSE G ++A+V T +S
Sbjct: 141 TTEGLPVQAGESTFVDSPYKVYVGNLAKNVTSDSLKKFFSEKGNALSAKVSRAPGTSKSS 200
Query: 322 GFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 354
GFGFVT SS+ ++ AI++ + L+G+ IRVN
Sbjct: 201 GFGFVTFSSDEDVEAAISSFNNALLEGQKIRVN 233
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 278 PGFR-IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
P R +YVGN+P V N LE++ EHG V A V+YD+ + RSR F FVTM + + N
Sbjct: 57 PALRKLYVGNIPRTVSNDELEKIVQEHGAVEKAEVMYDKYSKRSRRFAFVTMKTVEDANA 116
Query: 337 AIAALDGQNLDGRAIRVNVAE 357
A L+G + GR I+VN+ E
Sbjct: 117 AAEKLNGTEIGGREIKVNITE 137
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 51/114 (44%), Gaps = 32/114 (28%)
Query: 150 EEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAV 209
E FV+ P K++VGNL +V S+ L F + G A+V
Sbjct: 151 ESTFVDSP--YKVYVGNLAKNVTSDSLKKFFSEKGNALSAKV------------------ 190
Query: 210 FYVSLLQVIYNRE--TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNK 261
+R T +S GFGFVT S+ E+ E A+ F+ ++G+ + VNK
Sbjct: 191 ----------SRAPGTSKSSGFGFVTFSSDEDVEAAISSFNNALLEGQKIRVNK 234
>gi|225450219|ref|XP_002265629.1| PREDICTED: 30S ribosomal protein 2, chloroplastic [Vitis vinifera]
gi|297736206|emb|CBI24844.3| unnamed protein product [Vitis vinifera]
Length = 247
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 108/204 (52%), Gaps = 35/204 (17%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+L+VGN+P +DS +LA + E+ G VE AEV +Y+
Sbjct: 71 RLYVGNIPRTLDSAELARIVEEHGAVEKAEV--------------------------MYD 104
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-APRGT------QPERAP 273
+ + RSR F FVTM TVE+A A+E + +I GR + VN P T Q E +
Sbjct: 105 KYSGRSRRFAFVTMKTVEDANAAIEKLNGTEIGGREIKVNITEKPLLTLDMSLLQAEESQ 164
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHG-KVVNARVVYDRETGRSRGFGFVTMSSET 332
+ P ++YVGNL V L Q FSE G KV++A+V T +S GFGFV+ SSE
Sbjct: 165 FIDSP-HKVYVGNLARTVTTDTLTQFFSEKGGKVLSAKVSRVPGTSKSSGFGFVSFSSEE 223
Query: 333 ELNDAIAALDGQNLDGRAIRVNVA 356
++ AI++ + LDG+ IRVN A
Sbjct: 224 DVEAAISSCNNAFLDGQRIRVNKA 247
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 52/77 (67%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R+YVGN+P +D+A L ++ EHG V A V+YD+ +GRSR F FVTM + + N AI
Sbjct: 71 RLYVGNIPRTLDSAELARIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDANAAIEK 130
Query: 341 LDGQNLDGRAIRVNVAE 357
L+G + GR I+VN+ E
Sbjct: 131 LNGTEIGGREIKVNITE 147
>gi|189203851|ref|XP_001938261.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985360|gb|EDU50848.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 475
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 124/238 (52%), Gaps = 48/238 (20%)
Query: 132 VVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEV 191
+V+ + +E + EEGV LFVGN+ +++D + L FE
Sbjct: 205 IVKKSKVEEPAAEEGV------------KNLFVGNMSWNIDEDWLRREFE---------- 242
Query: 192 KFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYD 251
GF V +VI +RET R++GFG+V + +A KA + H Y+
Sbjct: 243 ---------GFGEIVG-------CRVITDRETGRAKGFGYVEFANAADAAKAQKEMHEYE 286
Query: 252 IDGRLLTVNKAAPRGTQPE-----RAPRVFE----PGFRIYVGNLPWEVDNARLEQVFSE 302
+DGR L V+ + PR +P+ RA + + P +++GN+ +E N +++VF+E
Sbjct: 287 LDGRQLNVDFSTPR-AKPDANGGARANKYGDKRSPPSNTLFLGNVSFECSNESIQEVFAE 345
Query: 303 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
+G + + DR+TG +GFG+V SS+ E A+ AL+GQ++ GRAIR++ A R+
Sbjct: 346 YGSITRVSLPTDRDTGALKGFGYVDFSSQQEATAALEALNGQDIGGRAIRIDYATPRE 403
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++VGN+ W +D L + F G++V RV+ DRETGR++GFG+V ++ + A +
Sbjct: 223 LFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFANAADAAKAQKEM 282
Query: 342 DGQNLDGRAIRVNVAEDRQR 361
LDGR + V+ + R +
Sbjct: 283 HEYELDGRQLNVDFSTPRAK 302
>gi|255573485|ref|XP_002527668.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532973|gb|EEF34739.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 278
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 106/212 (50%), Gaps = 30/212 (14%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
EE E + KL+V NLP+ + + LF + GTV E
Sbjct: 74 EETQETTQKRKLYVFNLPWSLSVVDIKNLFGQCGTVTDVE-------------------- 113
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV---NKAAPRGT 267
I ++ RSRGF FVT+++ EEA+ A++ +++ GR++ V + P
Sbjct: 114 -------IIKQKNGRSRGFAFVTLASGEEAQAAIDKLDSHEVSGRIIRVEFAKRLKPPSP 166
Query: 268 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
E +IYV NL W+V + L + FS + V++RVV+D TGRS G+GFV+
Sbjct: 167 PSPTGTSARETRHKIYVSNLAWKVRSTHLREFFSTNFSPVSSRVVFDSPTGRSSGYGFVS 226
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
++ E AI+ALDG+ L GR +R+ ++ +
Sbjct: 227 FATREEAEAAISALDGKELMGRPLRLKFSDRK 258
>gi|225683278|gb|EEH21562.1| nuclear localization sequence-binding protein [Paracoccidioides
brasiliensis Pb03]
Length = 492
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 118/234 (50%), Gaps = 36/234 (15%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFL 196
+R+ E EE V ++ VEP E LF+GNL ++VD E L FE+ G E+A V+
Sbjct: 224 KRKAEDEEEVVAPKKTKVEPTEGGNLFIGNLSWNVDEEWLRSEFEEFG--ELAGVR---- 277
Query: 197 FGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRL 256
++ +R++ RS+GFG+V + E+A KA ++DGR
Sbjct: 278 --------------------IVTDRDSGRSKGFGYVEFTNAEDAVKAHAAKKDTELDGRK 317
Query: 257 LTVN------KAAPRGTQPERAPRVFEP----GFRIYVGNLPWEVDNARLEQVFSEHGKV 306
L V+ AAPR RA + +++GN+ + D + + F+E+G +
Sbjct: 318 LNVDFANARSNAAPRDRAQSRAQNFGDQRSPESDTLFIGNIAFSADENMISETFAEYGSI 377
Query: 307 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
+ R+ D E+GR +GFG+V SS E A +L+G L GRA+R++ + RQ
Sbjct: 378 LGVRLPTDPESGRPKGFGYVQFSSIDEARSAFESLNGSELAGRAMRLDFSTPRQ 431
>gi|397642327|gb|EJK75167.1| hypothetical protein THAOC_03118, partial [Thalassiosira oceanica]
Length = 452
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 105/215 (48%), Gaps = 44/215 (20%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL++GNL Y D +L +F G V VF +
Sbjct: 20 KLYIGNLDYSTDEPQLRSVFGAFGAVT--------------------DVF------LPME 53
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG- 279
R T R RGFGFVT+ST + AE A+ + +DGR + VN++ PRG P A R EPG
Sbjct: 54 RGTSRPRGFGFVTLSTRQAAEDAIAKMDQSQLDGRTIRVNESRPRGEGPG-ARRSNEPGT 112
Query: 280 ---------------FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFG 324
++YVGNL ++ + + +F ++G V + + DR+TGR RGF
Sbjct: 113 GPGGYGAFNPQGREDVKLYVGNLSFDTNEEAVRSMFEQYGTVSDCFLPSDRDTGRPRGFA 172
Query: 325 FVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
FVTM ++ E A ++G LDGR +RVN A+ +
Sbjct: 173 FVTMPAK-EAETACNKVNGMELDGRTVRVNEAQPK 206
>gi|388578824|gb|EIM19158.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 430
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 33/207 (15%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
++FVG L +++D + L FE+ G V+ A V+ +
Sbjct: 206 QIFVGQLSWNIDDDWLKSEFEQLGPVKTARVQL--------------------------D 239
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF---- 276
R++ RSRGFG+V + E A KA++ F +IDGR + V+ + PR PE+ + F
Sbjct: 240 RQSGRSRGFGYVEFESHELAVKAMDQFAGKEIDGRPVRVDLSVPRAPNPEKRAKSFGDQR 299
Query: 277 -EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
+P +++GNL + + R+ + F E G V + RV DRETG +GFG+V+ +
Sbjct: 300 SDPSNTLFIGNLSFNTNEDRVWEFFGEFGSVESVRVPTDRETGAPKGFGYVSFADVDTAK 359
Query: 336 DAIAALDGQNLDGRAIRVNVA--EDRQ 360
AI G LDGR IR++ + +DRQ
Sbjct: 360 AAIDGAAGSELDGRVIRLDFSTPKDRQ 386
>gi|356525630|ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Glycine
max]
Length = 246
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 107/203 (52%), Gaps = 34/203 (16%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+L+VGN+P V +E+LA + ++ G VE AEV +Y+
Sbjct: 71 RLYVGNIPRTVTNEELAKIVQEHGAVEKAEV--------------------------MYD 104
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-APRGT------QPERAP 273
+ + RSR F FVTM TVE+A +E + +I GR + VN P T Q E +
Sbjct: 105 KYSGRSRRFAFVTMKTVEDATAVIEKLNGTEIGGREVKVNVTEKPLSTPDLPLLQAEESE 164
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
+ P ++YVGNL V L+ FSE GKV++A+V T +S G+GFVT SSE +
Sbjct: 165 FIDSP-HKVYVGNLAKTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEED 223
Query: 334 LNDAIAALDGQNLDGRAIRVNVA 356
+ AI++ + L+G+ IRVN A
Sbjct: 224 VEAAISSFNNSLLEGQTIRVNKA 246
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 48/77 (62%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R+YVGN+P V N L ++ EHG V A V+YD+ +GRSR F FVTM + + I
Sbjct: 71 RLYVGNIPRTVTNEELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDATAVIEK 130
Query: 341 LDGQNLDGRAIRVNVAE 357
L+G + GR ++VNV E
Sbjct: 131 LNGTEIGGREVKVNVTE 147
>gi|225427185|ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
vinifera]
Length = 288
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 104/210 (49%), Gaps = 33/210 (15%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
E+ EP + KLFV NLP+ + + LF + GTV E
Sbjct: 80 EQTQEPNQKRKLFVLNLPWSLSVVDIKNLFGECGTVTDVE-------------------- 119
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV------NKAAP 264
I ++ RSRG+ FVTM + EEA+ VE F Y++ GR++ V K +P
Sbjct: 120 -------IIKQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFAKRFKKPSP 172
Query: 265 RGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFG 324
P P E ++YV NL W+V + L + FS + V+ RVV+D +GRS G+G
Sbjct: 173 PPPPPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYG 232
Query: 325 FVTMSSETELNDAIAALDGQNLDGRAIRVN 354
F + +++ E AI+ALDG+ L GR + +
Sbjct: 233 FASFATKEEAEAAISALDGKELMGRPVHLK 262
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 262 AAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSR 321
A P TQ R +++V NLPW + ++ +F E G V + ++ ++ GRSR
Sbjct: 77 AKPEQTQEPNQKR------KLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKD-GRSR 129
Query: 322 GFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
G+ FVTM S E + D L GR IRV A+
Sbjct: 130 GYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFAK 165
>gi|398409740|ref|XP_003856335.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
gi|339476220|gb|EGP91311.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
Length = 505
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 109/210 (51%), Gaps = 38/210 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFVGN+ ++VD E L FE+ G E+A V+ +I +R
Sbjct: 244 LFVGNISWNVDEEWLTREFEEFG--ELAGVR------------------------IITDR 277
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR--------GTQPERAP 273
++ RS+GFG+V S + A+KA+E + ++DGR L ++ + PR +RA
Sbjct: 278 DSGRSKGFGYVEFSDPQNAKKALEAKNGAELDGRELRLDFSTPRTNDGPGAGNKSNDRAA 337
Query: 274 RVFE----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
R + P ++VGN+ ++ D + + F EHG + R+ DRETG +GFG+V MS
Sbjct: 338 RFGDTTNAPAATLFVGNISFDADENAITEYFQEHGTIKAVRLPTDRETGAPKGFGYVEMS 397
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAEDR 359
S E A AL G ++ GR IR++ A +R
Sbjct: 398 SIEEAQAAFTALQGADIAGRPIRLDYAAER 427
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P ++VGN+ W VD L + F E G++ R++ DR++GRS+GFG+V S A
Sbjct: 240 PTGNLFVGNISWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEFSDPQNAKKA 299
Query: 338 IAALDGQNLDGRAIRVNVAEDR 359
+ A +G LDGR +R++ + R
Sbjct: 300 LEAKNGAELDGRELRLDFSTPR 321
>gi|255548039|ref|XP_002515076.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223545556|gb|EEF47060.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 281
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 102/213 (47%), Gaps = 36/213 (16%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P +L+V NLP D +L LF+ GTV EV
Sbjct: 95 PRPCELYVCNLPRSCDIAELVELFKPYGTVISVEVS------------------------ 130
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-----KAAPRGTQP-E 270
N ET SRG GFVTM ++ A+ A+ DI GR + V + R +P
Sbjct: 131 --RNPETGISRGCGFVTMGSINSAKNAIAALDGSDIGGREMRVKFSVDMNSGRRNPEPLS 188
Query: 271 RAPR---VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
AP +E F++YVGNL W V L FS+ G VV+ARV+YDR+ G++R +GF++
Sbjct: 189 SAPTKNLFYESPFKVYVGNLAWTVKPEELRDQFSKFGTVVSARVLYDRKAGKNRAYGFLS 248
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
SS E DA + +G++ GR + V +R+
Sbjct: 249 FSSTKE-RDAALSFNGKDFRGRILVVRKGVERE 280
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 266 GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 325
G Q ++ PR E +YV NLP D A L ++F +G V++ V + ETG SRG GF
Sbjct: 88 GRQLKKQPRPCE----LYVCNLPRSCDIAELVELFKPYGTVISVEVSRNPETGISRGCGF 143
Query: 326 VTMSSETELNDAIAALDGQNLDGRAIRVNVAED 358
VTM S +AIAALDG ++ GR +RV + D
Sbjct: 144 VTMGSINSAKNAIAALDGSDIGGREMRVKFSVD 176
>gi|426198367|gb|EKV48293.1| hypothetical protein AGABI2DRAFT_142473 [Agaricus bisporus var.
bisporus H97]
Length = 559
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 107/210 (50%), Gaps = 35/210 (16%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
PE +FVG L + VD+++LA F + G V A V+
Sbjct: 305 PETLSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQL----------------------- 341
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP--ERAPR 274
+R T RSRGFG+V ST + EKA++M + Y+IDGR + V+ + P + ER +
Sbjct: 342 ---DRNTGRSRGFGYVHFSTADAVEKALKM-NGYEIDGRAIKVDLSTPPNSNQIRERRAK 397
Query: 275 VFE-----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
VF P +++GNLP+ + L F H V R+ DRETG+ +GFG+V +
Sbjct: 398 VFNDEISPPSSTLFIGNLPFSITEDGLWSYFDGHS-VKTIRLPTDRETGQLKGFGYVELE 456
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAEDR 359
+ + A A+ GQ ++GR +RV+ ++ R
Sbjct: 457 NVEDAKKAFEAISGQEIEGRRVRVDYSQPR 486
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 11/106 (10%)
Query: 268 QPERAPRVFEPG----FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGF 323
QPE +P I+VG L W VDN RL Q FSE G+V +A V DR TGRSRGF
Sbjct: 292 QPEAKKVKLDPATPETLSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGF 351
Query: 324 GFVTMSSETELNDAIAALDGQNLDGRAIRVNVA------EDRQRRS 363
G+V S+ + A+ ++G +DGRAI+V+++ + R+RR+
Sbjct: 352 GYVHFSTADAVEKAL-KMNGYEIDGRAIKVDLSTPPNSNQIRERRA 396
>gi|302673016|ref|XP_003026195.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
gi|300099876|gb|EFI91292.1| hypothetical protein SCHCODRAFT_45556 [Schizophyllum commune H4-8]
Length = 218
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 103/207 (49%), Gaps = 36/207 (17%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FVG LP+DVD+++L F K G +E A V+ +R
Sbjct: 5 VFVGGLPFDVDNDRLQQEFAKFGDIESA--------------------------IVMMDR 38
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL---TVNKAAPRGTQ-PERAPRVF- 276
+T SRGFG+V +T E+A+KA E Y++DGR + T K P+G P R F
Sbjct: 39 QTGNSRGFGYVHFATHEQAKKAKEEMDGYELDGRNIRTGTATKPQPKGAHDPSSRARQFG 98
Query: 277 ----EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
EP ++VGNL W + +F+E+G V N R+ + ETGR +GFG+V
Sbjct: 99 DKPSEPSSTLFVGNLSWSATEDAVWGLFNEYG-VKNVRLPTEFETGRPKGFGYVEFEDIE 157
Query: 333 ELNDAIAALDGQNLDGRAIRVNVAEDR 359
A AL G LDGR IR++ ++ R
Sbjct: 158 GAKKAYEALAGAELDGRNIRLDYSQPR 184
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 53/83 (63%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++VG LP++VDN RL+Q F++ G + +A V+ DR+TG SRGFG+V ++ + A +
Sbjct: 5 VFVGGLPFDVDNDRLQQEFAKFGDIESAIVMMDRQTGNSRGFGYVHFATHEQAKKAKEEM 64
Query: 342 DGQNLDGRAIRVNVAEDRQRRSS 364
DG LDGR IR A Q + +
Sbjct: 65 DGYELDGRNIRTGTATKPQPKGA 87
>gi|297742089|emb|CBI33876.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 104/210 (49%), Gaps = 33/210 (15%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
E+ EP + KLFV NLP+ + + LF + GTV E
Sbjct: 50 EQTQEPNQKRKLFVLNLPWSLSVVDIKNLFGECGTVTDVE-------------------- 89
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV------NKAAP 264
I ++ RSRG+ FVTM + EEA+ VE F Y++ GR++ V K +P
Sbjct: 90 -------IIKQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFAKRFKKPSP 142
Query: 265 RGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFG 324
P P E ++YV NL W+V + L + FS + V+ RVV+D +GRS G+G
Sbjct: 143 PPPPPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYG 202
Query: 325 FVTMSSETELNDAIAALDGQNLDGRAIRVN 354
F + +++ E AI+ALDG+ L GR + +
Sbjct: 203 FASFATKEEAEAAISALDGKELMGRPVHLK 232
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
Query: 262 AAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSR 321
A P TQ R +++V NLPW + ++ +F E G V + ++ ++ GRSR
Sbjct: 47 AKPEQTQEPNQKR------KLFVLNLPWSLSVVDIKNLFGECGTVTDVEIIKQKD-GRSR 99
Query: 322 GFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
G+ FVTM S E + D L GR IRV A+
Sbjct: 100 GYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFAK 135
>gi|409079870|gb|EKM80231.1| hypothetical protein AGABI1DRAFT_73218 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 568
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 107/210 (50%), Gaps = 35/210 (16%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
PE +FVG L + VD+++LA F + G V A V+
Sbjct: 305 PETLSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQL----------------------- 341
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP--ERAPR 274
+R T RSRGFG+V ST + EKA++M + Y+IDGR + V+ + P + ER +
Sbjct: 342 ---DRNTGRSRGFGYVHFSTADAVEKALKM-NGYEIDGRAIKVDLSTPPNSNQIRERRAK 397
Query: 275 VFE-----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
VF P +++GNLP+ + L F H V R+ DRETG+ +GFG+V +
Sbjct: 398 VFNDEISPPSSTLFIGNLPFSITEDGLWSYFDGHS-VKTIRLPTDRETGQLKGFGYVELE 456
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAEDR 359
+ + A A+ GQ ++GR +RV+ ++ R
Sbjct: 457 NVEDAKKAFEAISGQEIEGRRVRVDYSQPR 486
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 63/106 (59%), Gaps = 11/106 (10%)
Query: 268 QPERAPRVFEPG----FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGF 323
QPE +P I+VG L W VDN RL Q FSE G+V +A V DR TGRSRGF
Sbjct: 292 QPEAKKVKLDPATPETLSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGF 351
Query: 324 GFVTMSSETELNDAIAALDGQNLDGRAIRVNVA------EDRQRRS 363
G+V S+ + A+ ++G +DGRAI+V+++ + R+RR+
Sbjct: 352 GYVHFSTADAVEKAL-KMNGYEIDGRAIKVDLSTPPNSNQIRERRA 396
>gi|52076130|dbj|BAD46643.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|52076137|dbj|BAD46650.1| putative nucleic acid-binding protein [Oryza sativa Japonica Group]
gi|222642112|gb|EEE70244.1| hypothetical protein OsJ_30366 [Oryza sativa Japonica Group]
Length = 611
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 85/148 (57%), Gaps = 16/148 (10%)
Query: 229 FGFVTMSTVEEAEKAVEMFHR---YDIDGRLLTVNKA------------APRGTQPERAP 273
FG VTM+TV++ V F + D+ LL V A A P
Sbjct: 462 FGVVTMTTVQKPADIVAAFDKRGFLDLH-PLLAVEFAEQQPRQEWILTEAALAIAPTTVH 520
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
F IYVGNL W+VD RL + F EHG+V+ A+VV DR+TGRSRGFGFV+M++ E
Sbjct: 521 SFSPKDFSIYVGNLRWDVDRLRLLKFFGEHGRVLVAQVVCDRQTGRSRGFGFVSMATLRE 580
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDRQR 361
+D IA+L+GQ +DGR +RV+ A+ + R
Sbjct: 581 PDDVIASLNGQIMDGRPMRVSFAKWQPR 608
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 28/111 (25%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P+D ++VGNL +DVD +L F + G V +A Q
Sbjct: 524 PKDFSIYVGNLRWDVDRLRLLKFFGEHGRVLVA--------------------------Q 557
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN--KAAPR 265
V+ +R+T RSRGFGFV+M+T+ E + + + +DGR + V+ K PR
Sbjct: 558 VVCDRQTGRSRGFGFVSMATLREPDDVIASLNGQIMDGRPMRVSFAKWQPR 608
>gi|255939157|ref|XP_002560348.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584970|emb|CAP83009.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 507
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 110/210 (52%), Gaps = 36/210 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF+GNL ++VD E L F + FG +S ++++
Sbjct: 252 ANLFIGNLSWNVDEEWLQREFSE--------------FGE------------LSGVRIVT 285
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER---APRVF 276
+RE+ RSRGFG+V ++ +A KA+E D+DGR + ++ AAPR P++ R
Sbjct: 286 DRESGRSRGFGYVEYTSAADAAKAMEAKKGTDLDGRTINLDYAAPRQANPQQDRTQDRAR 345
Query: 277 EPGFR-------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
G + ++VGNLP+ L +VF HG V+ R+ ++ETGR +GFG+V S
Sbjct: 346 SYGDQTSPESDTLFVGNLPFSATEDALHEVFGAHGSVLGIRLPTEQETGRPKGFGYVQFS 405
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAEDR 359
S E A AL+G L+GRA+R++ + R
Sbjct: 406 SIDEAKAAHGALNGHELEGRAVRLDFSTPR 435
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+++GNL W VD L++ FSE G++ R+V DRE+GRSRGFG+V +S + A+ A
Sbjct: 254 LFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRESGRSRGFGYVEYTSAADAAKAMEAK 313
Query: 342 DGQNLDGRAIRVNVAEDRQ 360
G +LDGR I ++ A RQ
Sbjct: 314 KGTDLDGRTINLDYAAPRQ 332
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 26/109 (23%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
PE LFVGNLP+ + L H +FG G + + +
Sbjct: 353 PESDTLFVGNLPFSATEDAL-----------------HEVFGAHGSVLGI---------R 386
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+ +ET R +GFG+V S+++EA+ A + ++++GR + ++ + PR
Sbjct: 387 LPTEQETGRPKGFGYVQFSSIDEAKAAHGALNGHELEGRAVRLDFSTPR 435
>gi|326497679|dbj|BAK05929.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/267 (31%), Positives = 117/267 (43%), Gaps = 42/267 (15%)
Query: 103 EEEPNW-ENQGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEF-VEPPEDA 160
EE W +Q + E N +W G + GE + GE + + P
Sbjct: 72 EETARWPASQAQSDDEDNEQEWA---GGNGTAAHGEEEHYGGEPAAEDGSGWDRRRPRPR 128
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+LFV NLP ++L LF GTV EV +
Sbjct: 129 ELFVCNLPRRCGVDELLELFGPYGTVLSVEVS--------------------------RD 162
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA--------PRGTQ--PE 270
ET SRG GFVTM ++ EA A+ +D+DGR + V AA P G P
Sbjct: 163 AETGISRGCGFVTMRSLAEARTAINALDGFDLDGREMFVKLAAHVIASRRNPGGLSHTPP 222
Query: 271 RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
+FE ++IYVGNL W V L + F++ G VV+ R++ DR+ GRSR +GF++ SS
Sbjct: 223 MKDHIFESRYKIYVGNLAWSVQPQHLREHFTKCGTVVSTRLLTDRKGGRSRVYGFLSFSS 282
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAE 357
EL A+ L+ GR I V A
Sbjct: 283 AEELEAAL-QLNNTEFHGRDIIVREAH 308
>gi|224106031|ref|XP_002314019.1| predicted protein [Populus trichocarpa]
gi|222850427|gb|EEE87974.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 36/212 (16%)
Query: 154 VEPPEDA--KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFY 211
V+P +A +L+VGN+P + +E+L + E+ G VE AEV
Sbjct: 71 VDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEV-------------------- 110
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+Y++ + RSR F FVTM T E+A A+E + +I GR + VN + Q
Sbjct: 111 ------MYDKYSGRSRRFAFVTMKTAEDANAAIEKLNGTEIGGREIKVN-ITEKPLQSLD 163
Query: 272 APRV-------FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFG 324
P + + +++YVGNL V L+ FS+ G V++A+V T +S GFG
Sbjct: 164 LPSLQSDESQFVDSPYKVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFG 223
Query: 325 FVTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
FVT SSE ++ AI++ + L+G+ IRVN A
Sbjct: 224 FVTFSSEEDVEVAISSFNNSLLEGQPIRVNKA 255
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
E R+YVGN+P + N L ++ EHG V A V+YD+ +GRSR F FVTM + + N
Sbjct: 76 EAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTAEDANA 135
Query: 337 AIAALDGQNLDGRAIRVNVAE 357
AI L+G + GR I+VN+ E
Sbjct: 136 AIEKLNGTEIGGREIKVNITE 156
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 45/229 (19%)
Query: 150 EEEFVEPPEDAK-----------LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFG 198
EEE + P + A+ +FVG L ++VD++ L FE G V A
Sbjct: 175 EEESIAPAKKARADGGDEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSA--------- 225
Query: 199 NQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 258
+V+++R++ +SRGFG+V + +E + KA+E +IDGR +
Sbjct: 226 -----------------RVVFDRDSQKSRGFGYVEFADLESSAKAIEK-DGSEIDGRAIR 267
Query: 259 VNKAAPR--GTQPERAPRVFE-----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARV 311
VN A R E+ RVF P +++G+L + V ++ + F +HG V + R+
Sbjct: 268 VNYATQRKPNEAAEKRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRL 327
Query: 312 VYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
DR+TG +GFG+V SS + + A+ A++G + GRAIRV+ A +Q
Sbjct: 328 PTDRDTGAPKGFGYVQFSSVDDASAALKAMNGAEIAGRAIRVDFAPPKQ 376
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 116/229 (50%), Gaps = 45/229 (19%)
Query: 150 EEEFVEPPEDAK-----------LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFG 198
EEE + P + A+ +FVG L ++VD++ L FE G V A
Sbjct: 172 EEESIAPAKKARADGGDEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSA--------- 222
Query: 199 NQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 258
+V+++R++ +SRGFG+V + +E + KA+E +IDGR +
Sbjct: 223 -----------------RVVFDRDSQKSRGFGYVEFADLESSAKAIEK-DGSEIDGRAIR 264
Query: 259 VNKAAPR--GTQPERAPRVFE-----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARV 311
VN A R E+ RVF P +++G+L + V ++ + F +HG V + R+
Sbjct: 265 VNYATQRKPNEAAEKRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRL 324
Query: 312 VYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
DR+TG +GFG+V SS + + A+ A++G + GRAIRV+ A +Q
Sbjct: 325 PTDRDTGAPKGFGYVQFSSVDDASAALKAMNGAEIAGRAIRVDFAPPKQ 373
>gi|118489133|gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 255
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 109/212 (51%), Gaps = 36/212 (16%)
Query: 154 VEPPEDA--KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFY 211
V+P +A +L+VGN+P + +E+L + E+ G VE AEV
Sbjct: 71 VDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEV-------------------- 110
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+Y++ + RSR F FVTM T E+A A+E + +I GR + VN + Q
Sbjct: 111 ------MYDKYSGRSRRFAFVTMKTAEDANAAIEKLNGTEIGGREIKVN-ITEKPLQSLD 163
Query: 272 APRV-------FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFG 324
P + + +++YVGNL V L+ FS+ G V++A+V T +S GFG
Sbjct: 164 LPSLQSDETQFVDSPYKVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFG 223
Query: 325 FVTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
FVT SSE ++ AI++ + L+G+ IRVN A
Sbjct: 224 FVTFSSEEDVEVAISSFNNSLLEGQPIRVNKA 255
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
E R+YVGN+P + N L ++ EHG V A V+YD+ +GRSR F FVTM + + N
Sbjct: 76 EAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMKTAEDANA 135
Query: 337 AIAALDGQNLDGRAIRVNVAE 357
AI L+G + GR I+VN+ E
Sbjct: 136 AIEKLNGTEIGGREIKVNITE 156
>gi|255646669|gb|ACU23808.1| unknown [Glycine max]
Length = 125
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 82/128 (64%), Gaps = 5/128 (3%)
Query: 234 MSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE-RAPRVFEPGFRIYVGNLPWEVD 292
MS +E+ +E + + GR L VN + ++P+ + P E +++VGNL W V
Sbjct: 1 MSCIEDCNAVIENLNGKEFLGRTLRVNFS----SKPKPKEPLYPETEHKLFVGNLSWSVT 56
Query: 293 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 352
N L Q F E+G VV ARV+YD ETGRSRG+GFV S++ E+ A+AAL+ L+GRA+R
Sbjct: 57 NEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCYSTQAEMEAAVAALNDVELEGRAMR 116
Query: 353 VNVAEDRQ 360
V++A+ ++
Sbjct: 117 VSLAQGKR 124
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 26/107 (24%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P + KLFVGNL + V +E L F++ GTV A
Sbjct: 40 PETEHKLFVGNLSWSVTNEILTQAFQEYGTVVGA-------------------------- 73
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+V+Y+ ET RSRG+GFV ST E E AV + +++GR + V+ A
Sbjct: 74 RVLYDGETGRSRGYGFVCYSTQAEMEAAVAALNDVELEGRAMRVSLA 120
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 120/233 (51%), Gaps = 37/233 (15%)
Query: 137 ERQEESGEEGVFEEEEFVEP-PEDA--KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKF 193
+R+ E E V ++ + EP ED LFVGNL +++D + L FE G
Sbjct: 222 KRKAEEVAEPVIKKTKTDEPVAEDGVKNLFVGNLSWNIDEDWLRREFESFG--------- 272
Query: 194 HFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDID 253
+ C +VI +RET R++GFG+V + +A KA + H Y++D
Sbjct: 273 ---------EIVGC--------RVITDRETGRAKGFGYVEFAKAADAAKAQKDMHEYELD 315
Query: 254 GRLLTVNKAAPRGTQPERAPRVFE-------PGFRIYVGNLPWEVDNARLEQVFSEHGKV 306
GR L V+ + PR +P+ R + P +++GNL ++ N +++VF+E+G V
Sbjct: 316 GRPLNVDFSTPR-QKPDANARANKFGDKRSAPSNTLFIGNLSFDCTNETIQEVFAEYGNV 374
Query: 307 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
+ DR++G +GFG+V S+ E A+ AL GQ++ GR +RV+ A R
Sbjct: 375 TRVSLPTDRDSGALKGFGYVDFGSQEEATAALEALQGQDVAGRPLRVDFAAPR 427
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 275 VFEPGFR-IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
V E G + ++VGNL W +D L + F G++V RV+ DRETGR++GFG+V + +
Sbjct: 242 VAEDGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKAAD 301
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDRQR 361
A + LDGR + V+ + RQ+
Sbjct: 302 AAKAQKDMHEYELDGRPLNVDFSTPRQK 329
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 120/233 (51%), Gaps = 37/233 (15%)
Query: 137 ERQEESGEEGVFEEEEFVEP-PEDA--KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKF 193
+R+ E E V ++ + EP ED LFVGNL +++D + L FE G
Sbjct: 209 KRKAEEVAEPVIKKTKTDEPVAEDGVKNLFVGNLSWNIDEDWLRREFESFG--------- 259
Query: 194 HFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDID 253
+ C +VI +RET R++GFG+V + +A KA + H Y++D
Sbjct: 260 ---------EIVGC--------RVITDRETGRAKGFGYVEFAKAADAAKAQKDMHEYELD 302
Query: 254 GRLLTVNKAAPRGTQPERAPRVFE-------PGFRIYVGNLPWEVDNARLEQVFSEHGKV 306
GR L V+ + PR +P+ R + P +++GNL ++ N +++VF+E+G V
Sbjct: 303 GRPLNVDFSTPR-QKPDANARANKFGDKRSAPSNTLFIGNLSFDCTNETIQEVFAEYGNV 361
Query: 307 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
+ DR++G +GFG+V S+ E A+ AL GQ++ GR +RV+ A R
Sbjct: 362 TRVSLPTDRDSGALKGFGYVDFGSQEEATAALEALHGQDVAGRPLRVDFAAPR 414
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 275 VFEPGFR-IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
V E G + ++VGNL W +D L + F G++V RV+ DRETGR++GFG+V + +
Sbjct: 229 VAEDGVKNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKAAD 288
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDRQR 361
A + LDGR + V+ + RQ+
Sbjct: 289 AAKAQKDMHEYELDGRPLNVDFSTPRQK 316
>gi|4678944|emb|CAB41335.1| putative protein [Arabidopsis thaliana]
Length = 546
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 110/220 (50%), Gaps = 44/220 (20%)
Query: 149 EEEEFVEPPEDA--KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
E+ ++P +A ++++GN+P V +E+L L E+ G VE
Sbjct: 63 EKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVE------------------- 103
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFH-------RYDIDGRLLTV 259
+V+Y++ + RSR FGF TM +VE+A VE + ++GR + V
Sbjct: 104 ---------KVMYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNSLFLVSQTVEGREIKV 154
Query: 260 NKA-APRGTQPERA------PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVV 312
N P + P+ + + +++YVGNL V LE +FSE GKVV+A+V
Sbjct: 155 NITEKPIASSPDLSVLQSEDSAFVDSPYKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVS 214
Query: 313 YDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIR 352
T +S GFGFVT SSE ++ AI AL+ L+G+ IR
Sbjct: 215 RVPGTSKSTGFGFVTFSSEEDVEAAIVALNNSLLEGQKIR 254
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 13/102 (12%)
Query: 267 TQPERAPRVFEP----GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
T+ E P +P R+Y+GN+P V N +L ++ EHG V +V+YD+ +GRSR
Sbjct: 59 TETEEKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAV--EKVMYDKYSGRSRR 116
Query: 323 FGFVTMSSETELNDAIAALDG-------QNLDGRAIRVNVAE 357
FGF TM S + N + L+G Q ++GR I+VN+ E
Sbjct: 117 FGFATMKSVEDANAVVEKLNGNSLFLVSQTVEGREIKVNITE 158
>gi|255544262|ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223547691|gb|EEF49184.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 256
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 106/203 (52%), Gaps = 34/203 (16%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+L++GN+P VD+++L + E+ G VE AEV +Y+
Sbjct: 81 RLYIGNIPRTVDNDELTKIVEEHGAVEKAEV--------------------------MYD 114
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN---KAAPRG----TQPERAP 273
+ + RSR F FVTM TVE+A +E + I GR + VN K G Q E +
Sbjct: 115 KYSGRSRRFAFVTMRTVEDANAVIEKLNGTQIGGREIKVNITEKPLASGDLSFLQLEESQ 174
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
V P ++YVGNL V + L+ FSE GKV++A+V T +S G+GFV+ S E +
Sbjct: 175 FVDSP-HKVYVGNLAKTVTSEILKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVSFSEEED 233
Query: 334 LNDAIAALDGQNLDGRAIRVNVA 356
+ AI++ + L+G+ IRVN A
Sbjct: 234 VEAAISSFNNSLLEGQKIRVNKA 256
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%)
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
E R+Y+GN+P VDN L ++ EHG V A V+YD+ +GRSR F FVTM + + N
Sbjct: 77 EAAKRLYIGNIPRTVDNDELTKIVEEHGAVEKAEVMYDKYSGRSRRFAFVTMRTVEDANA 136
Query: 337 AIAALDGQNLDGRAIRVNVAE 357
I L+G + GR I+VN+ E
Sbjct: 137 VIEKLNGTQIGGREIKVNITE 157
>gi|453089427|gb|EMF17467.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 501
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 108/215 (50%), Gaps = 38/215 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF+GNL ++VD E L FE+ G E+A V+ +I
Sbjct: 240 ANLFIGNLSWNVDEEWLTREFEEFG--ELAGVR------------------------IIT 273
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR-----GTQPERAPR 274
+R++ RS+GFG+V + E+A KA+E + +D R + V+ + PR G Q R
Sbjct: 274 DRDSGRSKGFGYVEFTNAEDAAKALEAKNESLLDNRNIRVDFSTPRDKSNAGPQQRSNDR 333
Query: 275 -------VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
EP I+ GNL ++ + + F+EHG V + R+ DR+TG +GFG+V
Sbjct: 334 QQKFGDAPGEPTATIWCGNLSFDATEDVVREYFAEHGNVNSIRLPTDRDTGAPKGFGYVE 393
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
M S E A AL GQ++ GR +R++ A+ R R
Sbjct: 394 MGSVEEAQAAFNALQGQDVGGRPVRLDYAQPRPPR 428
>gi|452824419|gb|EME31422.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 148
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/82 (57%), Positives = 65/82 (79%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R++VG LPW + L+QVFS++G+VV+ARVV DRETGRSRGFGF++ + + +++ IAA
Sbjct: 6 RVFVGGLPWSISEEDLKQVFSKYGEVVDARVVIDRETGRSRGFGFISYAESSSVDECIAA 65
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
LDGQ+L GR IRVN A R++R
Sbjct: 66 LDGQDLQGRTIRVNKAMTREQR 87
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
ED ++FVG LP+ + E L +F K G V A +
Sbjct: 2 SEDNRVFVGGLPWSISEEDLKQVFSKYGEVVDA--------------------------R 35
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
V+ +RET RSRGFGF++ + ++ + D+ GR + VNKA R
Sbjct: 36 VVIDRETGRSRGFGFISYAESSSVDECIAALDGQDLQGRTIRVNKAMTR 84
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 104/204 (50%), Gaps = 32/204 (15%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FVG L ++VD E L F +AG V A V+ +R
Sbjct: 274 IFVGRLSWNVDDEWLKTEFAEAGEVVSARVQM--------------------------DR 307
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT-QPERAPRVF---- 276
+T +S+GFG+V + A+KAVE + +IDGR + ++ A PRG PER + F
Sbjct: 308 QTGKSKGFGYVEFADAASAKKAVETMNGREIDGRPVNLDLATPRGPPNPERRAKAFGDSR 367
Query: 277 -EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
EP ++VGNL + + ++F G+VVN R+ DR++G+ +GFG+V + +
Sbjct: 368 SEPSATLFVGNLAFSATQDAVYELFGAVGEVVNVRLPTDRDSGQPKGFGYVEFADVETAS 427
Query: 336 DAIAALDGQNLDGRAIRVNVAEDR 359
A+ L G + +GR IR++ + R
Sbjct: 428 KALNELGGTDFEGRNIRLDFSAPR 451
>gi|356557128|ref|XP_003546870.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Glycine
max]
Length = 246
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 106/203 (52%), Gaps = 34/203 (16%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+L+VGN+P V +++LA + ++ G VE AEV +Y+
Sbjct: 71 RLYVGNIPRTVTNDELAKIVQEHGAVEKAEV--------------------------MYD 104
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-APRGT------QPERAP 273
+ + RSR F FVTM TVE+A +E + ++ GR + VN P T Q E +
Sbjct: 105 KYSGRSRRFAFVTMKTVEDATAVIEKLNGTELGGREIKVNVTEKPLSTLDLPLLQAEESE 164
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
+ P ++YVGNL V L+ FSE GKV++A+V T +S G+GFVT SE +
Sbjct: 165 FIDSP-HKVYVGNLAKTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFPSEED 223
Query: 334 LNDAIAALDGQNLDGRAIRVNVA 356
+ AI++ + L+G+ IRVN A
Sbjct: 224 VEAAISSFNNSLLEGQTIRVNKA 246
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R+YVGN+P V N L ++ EHG V A V+YD+ +GRSR F FVTM + + I
Sbjct: 71 RLYVGNIPRTVTNDELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTMKTVEDATAVIEK 130
Query: 341 LDGQNLDGRAIRVNVAE 357
L+G L GR I+VNV E
Sbjct: 131 LNGTELGGREIKVNVTE 147
>gi|2267567|gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
gi|2267569|gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x hortorum]
Length = 166
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 60/78 (76%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LEQ FS++G+VV ++++ DRETGRSRGFGFVT S+E +NDAI
Sbjct: 8 YRCFVGGLAWATDDHALEQAFSQYGEVVESKIINDRETGRSRGFGFVTFSNEKSMNDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F + G E+ E K +I +
Sbjct: 9 RCFVGGLAWATDDHALEQAFSQYG--EVVESK------------------------IIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT S + A+E + ++DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFSNEKSMNDAIEGMNGQNLDGRNITVNEA 84
>gi|414884784|tpg|DAA60798.1| TPA: hypothetical protein ZEAMMB73_633133 [Zea mays]
Length = 244
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 114/236 (48%), Gaps = 34/236 (14%)
Query: 126 PEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGT 185
P V G S V E E V KL+VGN+P V +++L +F GT
Sbjct: 38 PAAAPQVSRRGSALRVSASSAVLEAPEAVA---ARKLYVGNIPRTVTNDELRDMFAAHGT 94
Query: 186 VEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVE 245
VE AEV +Y++ T+RSR FGFVTMST EEA AVE
Sbjct: 95 VERAEV--------------------------MYDKYTNRSRRFGFVTMSTAEEANAAVE 128
Query: 246 MFHRYDIDGRLLTVNKA---APR--GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 300
+ ++ R + VN P + PE + +++YVGNL V L+ F
Sbjct: 129 ALNGTEVGDRKIKVNVTESFLPNIDRSAPEPEALFVDSQYKVYVGNLAKTVTTEVLKNFF 188
Query: 301 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
SE G +++A V + T +S+G+GFVT SSE E+ A+A + L+G+ IRVN A
Sbjct: 189 SEKGNILSATVSHIPGTSKSKGYGFVTFSSEEEVEAAVATFNNAELEGQLIRVNRA 244
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 51/78 (65%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGN+P V N L +F+ HG V A V+YD+ T RSR FGFVTMS+ E N A+ A
Sbjct: 70 KLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTAEEANAAVEA 129
Query: 341 LDGQNLDGRAIRVNVAED 358
L+G + R I+VNV E
Sbjct: 130 LNGTEVGDRKIKVNVTES 147
>gi|169623995|ref|XP_001805404.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
gi|111056352|gb|EAT77472.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
Length = 451
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 109/205 (53%), Gaps = 34/205 (16%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFVG+L +++D + L FE G ++ +VI +R
Sbjct: 200 LFVGSLSWNIDEDWLRREFEGFGE--------------------------ITGCRVITDR 233
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
E+ RS+GFG+V ++ +A KA H Y++DGR L V+ + PR +P+++ R +
Sbjct: 234 ESGRSKGFGYVEFASAADAAKAKAEMHEYELDGRGLNVDFSTPR-EKPDQSARANKYGDK 292
Query: 278 ---PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
P +++GNL ++ N ++++F E+G + + DR+TG +GFG+V + E
Sbjct: 293 RSAPANTLFLGNLSFDCSNEGIQEIFQEYGNITRVSLPTDRDTGSLKGFGYVDFGTVEEA 352
Query: 335 NDAIAALDGQNLDGRAIRVNVAEDR 359
A+ AL+GQ ++GRAIR++ A R
Sbjct: 353 TAALEALNGQEVEGRAIRIDYAAPR 377
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++VG+L W +D L + F G++ RV+ DRE+GRS+GFG+V +S + A A +
Sbjct: 200 LFVGSLSWNIDEDWLRREFEGFGEITGCRVITDRESGRSKGFGYVEFASAADAAKAKAEM 259
Query: 342 DGQNLDGRAIRVNVAEDRQR 361
LDGR + V+ + R++
Sbjct: 260 HEYELDGRGLNVDFSTPREK 279
>gi|297816490|ref|XP_002876128.1| hypothetical protein ARALYDRAFT_348313 [Arabidopsis lyrata subsp.
lyrata]
gi|297321966|gb|EFH52387.1| hypothetical protein ARALYDRAFT_348313 [Arabidopsis lyrata subsp.
lyrata]
Length = 467
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 108/205 (52%), Gaps = 38/205 (18%)
Query: 149 EEEEFVEPPEDA--KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
E+ ++P +A ++++GN+P V +E+L L E+ G VE
Sbjct: 63 EKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVE------------------- 103
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN------ 260
+QV+Y++ + RSR FGF TM +VE+A VE + ++GR + VN
Sbjct: 104 -------KVQVMYDKYSGRSRRFGFATMKSVEDANAVVEKLNGNTVEGREIKVNITEKPI 156
Query: 261 -KAAPRGT--QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRET 317
++P + Q E + V P +++YVGNL V LE +FSE GKVV+A+V T
Sbjct: 157 ASSSPDLSLLQSEDSAFVDSP-YKVYVGNLAKTVTKEMLENLFSEKGKVVSAKVSRVPGT 215
Query: 318 GRSRGFGFVTMSSETELNDAIAALD 342
+S GFGFVT SSE ++ AI AL+
Sbjct: 216 SKSTGFGFVTFSSEEDVEAAILALN 240
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 267 TQPERAPRVFEP----GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
T+ E P +P R+Y+GN+P V N +L ++ EHG V +V+YD+ +GRSR
Sbjct: 59 TETEEKPAALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRR 118
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
FGF TM S + N + L+G ++GR I+VN+ E
Sbjct: 119 FGFATMKSVEDANAVVEKLNGNTVEGREIKVNITE 153
>gi|222837999|gb|EEE76364.1| predicted protein [Populus trichocarpa]
Length = 121
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 76/117 (64%), Gaps = 2/117 (1%)
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
V+ +V+ R+T RS+GFGFV M + EA+ A++ H + GR L VN+A P +P
Sbjct: 7 VNSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGLHGQNRGGRDLVVNEARP--MEPRA 64
Query: 272 APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
F G ++YVGNLP+ V + LEQ FS+ G V +ARV+ +R+TGRS+GFGFV M
Sbjct: 65 PLEEFLMGNKLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEM 121
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 300 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
FSE G V +A+V+ +R+TGRS+GFGFV M S+ E AI L GQN GR + VN A
Sbjct: 1 FSEFGAVNSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIQGLHGQNRGGRDLVVNEARPM 60
Query: 360 QRRS 363
+ R+
Sbjct: 61 EPRA 64
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 26/74 (35%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 74 KLYVGNLPYGVRDNDLEQAFSQFGAVTSA--------------------------RVMME 107
Query: 221 RETDRSRGFGFVTM 234
R+T RS+GFGFV M
Sbjct: 108 RDTGRSKGFGFVEM 121
>gi|357473251|ref|XP_003606910.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507965|gb|AES89107.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 161
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 62/78 (79%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W DN LE+ FS++G++V+++++ DRETGRSRGFGFVT ++E +NDAI
Sbjct: 6 YRCFVGGLAWATDNEALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDAIE 65
Query: 340 ALDGQNLDGRAIRVNVAE 357
A++GQ+LDGR I VN A+
Sbjct: 66 AMNGQDLDGRNITVNQAQ 83
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D+E L F + G EI + K +I +
Sbjct: 7 RCFVGGLAWATDNEALEKAFSQYG--EIVDSK------------------------IIND 40
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + + A+E + D+DGR +TVN+A
Sbjct: 41 RETGRSRGFGFVTFANEKSMNDAIEAMNGQDLDGRNITVNQA 82
>gi|425781065|gb|EKV19047.1| Nucleolin protein Nsr1, putative [Penicillium digitatum PHI26]
Length = 537
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 108/211 (51%), Gaps = 37/211 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF+GNL ++VD E L F + FG +S ++++
Sbjct: 281 ANLFIGNLSWNVDEEWLQREFSE--------------FGE------------LSGVRIVT 314
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+RET RSRGFG+V ++ +A KA+E D+DGR + ++ AAPR + A R +
Sbjct: 315 DRETGRSRGFGYVEYNSAADAAKAMEAKKGTDLDGRTINLDYAAPRQANTQGADRSQDRA 374
Query: 280 FR-----------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
++VGNLP+ L +VF G V+ R+ ++ETGR +GFG+V
Sbjct: 375 RSYGDQTSPESDTLFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQF 434
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
SS E A AAL+G L+GRAIR++ + R
Sbjct: 435 SSIDEAKAAHAALNGHELEGRAIRLDFSTPR 465
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+++GNL W VD L++ FSE G++ R+V DRETGRSRGFG+V +S + A+ A
Sbjct: 283 LFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNSAADAAKAMEAK 342
Query: 342 DGQNLDGRAIRVNVAEDRQ 360
G +LDGR I ++ A RQ
Sbjct: 343 KGTDLDGRTINLDYAAPRQ 361
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 26/109 (23%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
PE LFVGNLP+ + L H +FG QG + + +
Sbjct: 383 PESDTLFVGNLPFSATEDAL-----------------HEVFGAQGSVLGI---------R 416
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+ +ET R +GFG+V S+++EA+ A + ++++GR + ++ + PR
Sbjct: 417 LPTEQETGRPKGFGYVQFSSIDEAKAAHAALNGHELEGRAIRLDFSTPR 465
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 102/200 (51%), Gaps = 32/200 (16%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FVG L +++D++ LA F G V A +++ +R
Sbjct: 206 VFVGGLSWNIDNDWLASEFASCGEVVSA--------------------------RIVLDR 239
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
+T RSRGFG+V + V+ A KA+E F ++DGR + VN A R ++ +VF
Sbjct: 240 DTQRSRGFGYVEFADVDSAIKAIE-FEGKELDGRAVRVNFANARKPDADKRAKVFNDKRS 298
Query: 278 -PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
P +++G+LP++ + + F E+G V + R+ DRETG ++GFG+VT +
Sbjct: 299 PPADTLWIGSLPFDTTEDHIYETFGEYGDVQSVRLPTDRETGAAKGFGYVTFGDVAQATA 358
Query: 337 AIAALDGQNLDGRAIRVNVA 356
A+ AL+G R IR++ A
Sbjct: 359 ALEALNGSEFGSRRIRIDFA 378
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%), Gaps = 5/81 (6%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++VG L W +DN L F+ G+VV+AR+V DR+T RSRGFG+V + +++ AI A+
Sbjct: 206 VFVGGLSWNIDNDWLASEFASCGEVVSARIVLDRDTQRSRGFGYVEFA---DVDSAIKAI 262
Query: 342 D--GQNLDGRAIRVNVAEDRQ 360
+ G+ LDGRA+RVN A R+
Sbjct: 263 EFEGKELDGRAVRVNFANARK 283
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 27/110 (24%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
PP D L++G+LP+D + + F + G V+ +
Sbjct: 299 PPADT-LWIGSLPFDTTEDHIYETFGEYGDVQ--------------------------SV 331
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
++ +RET ++GFG+VT V +A A+E + + R + ++ A P+
Sbjct: 332 RLPTDRETGAAKGFGYVTFGDVAQATAALEALNGSEFGSRRIRIDFAPPK 381
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 40/232 (17%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFL 196
+R+ E+ E ++ + +P LFVGNL ++VD E L FE+ G ++
Sbjct: 230 KRKAEAEPEETSKKTKTEDPAATGNLFVGNLSWNVDEEWLTREFEEFGAIK--------- 280
Query: 197 FGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRL 256
++VI +R++ RS+G+G+V + ++A KA+E H Y +D R
Sbjct: 281 -----------------AVRVITDRDSGRSKGYGYVEFESADDAAKALEARHGYTLDNRE 323
Query: 257 LTVNKAAPR-----GTQPER---------APRVFEPGFRIYVGNLPWEVDNARLEQVFSE 302
L V+ PR G P++ +P ++VGN+ ++ + +VF E
Sbjct: 324 LRVDLGTPRAQRNDGQTPQQRSNDRQKQYGDTPSQPSATLFVGNISFDATQDMVTEVFQE 383
Query: 303 HGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 354
+G + R+ DRETG +GFG+V SS E A+ L G ++ GR IR++
Sbjct: 384 YGSINAVRLPTDRETGAPKGFGYVEFSSIEEAKSAMENLTGVDIAGRPIRLD 435
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++VGNL W VD L + F E G + RV+ DR++GRS+G+G+V S + A+ A
Sbjct: 255 LFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRDSGRSKGYGYVEFESADDAAKALEAR 314
Query: 342 DGQNLDGRAIRVNVAEDRQRRS 363
G LD R +RV++ R +R+
Sbjct: 315 HGYTLDNRELRVDLGTPRAQRN 336
>gi|449462067|ref|XP_004148763.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Cucumis
sativus]
Length = 282
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 32/227 (14%)
Query: 136 GERQEESGEEGVFEE--EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKF 193
G R + +E EE EE + + KL++ NLP+ + + LF + GTV E
Sbjct: 62 GARLCSALQEVTLEEASEENQDVNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVE--- 118
Query: 194 HFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDID 253
I ++ RSRGF FVTM++ +EA+ A++ F +I
Sbjct: 119 ------------------------IIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEIS 154
Query: 254 GRLLTV---NKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNAR 310
GR++ V + P E ++YV NL W+V + L FSE+ + AR
Sbjct: 155 GRVIKVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLAWKVRSNNLRDFFSENFNPIAAR 214
Query: 311 VVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
VV+D GRS G+GFV+ ++ E A+++L+G+ L GR +R+ +E
Sbjct: 215 VVFDSPAGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRLKFSE 261
>gi|449515273|ref|XP_004164674.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 288
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 110/227 (48%), Gaps = 32/227 (14%)
Query: 136 GERQEESGEEGVFEE--EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKF 193
G R + +E EE EE + + KL++ NLP+ + + LF + GTV E
Sbjct: 68 GARLCSALQEVTLEEASEENQDVNQKRKLYIFNLPWSLSVVDIKELFGQCGTVSDVE--- 124
Query: 194 HFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDID 253
I ++ RSRGF FVTM++ +EA+ A++ F +I
Sbjct: 125 ------------------------IIKQKNGRSRGFAFVTMASPDEAQAAIQKFDSQEIS 160
Query: 254 GRLLTV---NKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNAR 310
GR++ V + P E ++YV NL W+V + L FSE+ + AR
Sbjct: 161 GRVIKVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLAWKVRSNNLRDFFSENFNPIAAR 220
Query: 311 VVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
VV+D GRS G+GFV+ ++ E A+++L+G+ L GR +R+ +E
Sbjct: 221 VVFDSPAGRSAGYGFVSFATREEAQTALSSLEGKELMGRPLRLKFSE 267
>gi|357139508|ref|XP_003571323.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like
[Brachypodium distachyon]
Length = 288
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 97/211 (45%), Gaps = 38/211 (18%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P +LFV NLP + L LF+ GTV EV
Sbjct: 98 PRPRELFVCNLPRRCGVDDLLHLFQPYGTVLSVEVS------------------------ 133
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAP--- 273
+ ET SRG GFVTM ++ A A+ +D+DGR + V K A R P
Sbjct: 134 --RDPETGISRGCGFVTMRSLAAARTAMNALDGFDLDGREMFV-KLASHVVSNRRNPSLS 190
Query: 274 -------RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
+FE ++IYVGNL W V L ++F++ G +V+ R++ DR+ R+R +GF+
Sbjct: 191 HTAPMKDHIFESPYKIYVGNLAWSVQPQHLRELFTQCGNIVSTRLLTDRKGARNRVYGFL 250
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
+ SS EL DA L+ N GR I V A
Sbjct: 251 SFSSPEEL-DAALKLNNTNFHGRDIIVREAH 280
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 108/206 (52%), Gaps = 34/206 (16%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FVG L ++VD++ L FE G V A +V+++R
Sbjct: 196 VFVGQLSWNVDNDWLKSEFESCGEVVSA--------------------------RVVFDR 229
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ--PERAPRVFE-- 277
++ +SRGFG+V + +E + KA+E +IDGR + VN A R E+ +VF
Sbjct: 230 DSQKSRGFGYVEFADLEASAKAIEK-DGSEIDGRAIRVNYATQRKPNEAAEKRAKVFNDK 288
Query: 278 ---PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
P +++G+L + V ++ + F +HG V + R+ DR+TG +GFG+V SS +
Sbjct: 289 QSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDA 348
Query: 335 NDAIAALDGQNLDGRAIRVNVAEDRQ 360
+ A+ A++G + GRAIRV+ A +Q
Sbjct: 349 SAALKAMNGAEIAGRAIRVDFAPPKQ 374
>gi|296805886|ref|XP_002843767.1| ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238845069|gb|EEQ34731.1| ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 471
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 109/213 (51%), Gaps = 38/213 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF GNL ++VD E L FE+ F L G +++
Sbjct: 233 ANLFAGNLSWNVDEEWLRSEFEE----------FGELVG----------------ARIVT 266
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR----GTQPERA-PR 274
+RE+ RSRGFG+V + VE+A KA ++DGR L ++ A R G ERA R
Sbjct: 267 DRESGRSRGFGYVEFANVEDAVKAHAAKKDAELDGRKLNLDFANARTNAGGNPRERADSR 326
Query: 275 VFEPGFR-------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
G + +++GNLP+ D ++++FS+HG ++ R+ D ++GR +GFG+V
Sbjct: 327 AKSFGDQTSPESDTLFLGNLPFSADENAVQELFSKHGSILGIRLPTDPDSGRPKGFGYVQ 386
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
SS E A+ A G +L GRAIR++ + RQ
Sbjct: 387 FSSVDEARAALEAEYGADLGGRAIRIDFSTPRQ 419
>gi|303321732|ref|XP_003070860.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110557|gb|EER28715.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040347|gb|EFW22280.1| hypothetical protein CPSG_00179 [Coccidioides posadasii str.
Silveira]
Length = 498
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 37/214 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E + LFVGNL ++VD E L FE G +S +++
Sbjct: 262 ESSNLFVGNLSWNVDEEWLRSEFESFG--------------------------ELSGVRI 295
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR----GTQPERAP 273
+ +R++ RSRGFG+V + E+A KA + +IDGR + ++ A R G +
Sbjct: 296 VTDRDSGRSRGFGYVEFTNAEDASKAFKAKKDAEIDGRTINLDFANARQNAGGARDRAQS 355
Query: 274 RVFEPGFR-------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
R G + +++GN+ + D +++ FS HG ++ R+ D E+GR +GFG+V
Sbjct: 356 RAKSFGDQTSPESDTLFIGNISFNADENAVQETFSSHGSILGIRLPTDPESGRPKGFGYV 415
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
SS E A AL G L GRA+R++ + RQ
Sbjct: 416 QFSSVDEARSAFNALQGTELAGRAMRLDFSTPRQ 449
>gi|119195917|ref|XP_001248562.1| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
gi|392862234|gb|EAS37139.2| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
Length = 496
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 37/214 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E + LFVGNL ++VD E L FE G +S +++
Sbjct: 260 ESSNLFVGNLSWNVDEEWLRSEFESFG--------------------------ELSGVRI 293
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR----GTQPERAP 273
+ +R++ RSRGFG+V + E+A KA + +IDGR + ++ A R G +
Sbjct: 294 VTDRDSGRSRGFGYVEFTNAEDASKAFKAKKDAEIDGRTINLDFANARQNAGGARDRAQS 353
Query: 274 RVFEPGFR-------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
R G + +++GN+ + D +++ FS HG ++ R+ D E+GR +GFG+V
Sbjct: 354 RAKSFGDQTSPESDTLFIGNISFNADENAVQETFSSHGSILGIRLPTDPESGRPKGFGYV 413
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
SS E A AL G L GRA+R++ + RQ
Sbjct: 414 QFSSVDEARSAFNALQGTELAGRAMRLDFSTPRQ 447
>gi|168054272|ref|XP_001779556.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669037|gb|EDQ55632.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 84
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 61/79 (77%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VGNL W D LE +FS++G+VV AR+ YD+++GRSRGFGFVT+S+ETE+N AI
Sbjct: 2 KLFVGNLSWGCDETALESLFSDYGRVVEARIAYDKDSGRSRGFGFVTLSNETEVNTAIEN 61
Query: 341 LDGQNLDGRAIRVNVAEDR 359
LDG D R +RVN+A D+
Sbjct: 62 LDGAEFDARQLRVNLAGDK 80
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 50/114 (43%), Gaps = 31/114 (27%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVGNL + D L LF G V A ++ Y+
Sbjct: 2 KLFVGNLSWGCDETALESLFSDYGRVVEA--------------------------RIAYD 35
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
+++ RSRGFGFVT+S E A+E + D R L VN A G +P APR
Sbjct: 36 KDSGRSRGFGFVTLSNETEVNTAIENLDGAEFDARQLRVNLA---GDKP--APR 84
>gi|425783198|gb|EKV21057.1| Nucleolin protein Nsr1, putative [Penicillium digitatum Pd1]
Length = 467
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 108/211 (51%), Gaps = 37/211 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF+GNL ++VD E + F + FG +S ++++
Sbjct: 211 ANLFIGNLSWNVDEEWVQREFSE--------------FGE------------LSGVRIVT 244
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+RET RSRGFG+V ++ +A KA+E D+DGR + ++ AAPR + A R +
Sbjct: 245 DRETGRSRGFGYVEYNSAADAAKAMEAKKGTDLDGRTINLDYAAPRQANTQGADRSQDRA 304
Query: 280 FR-----------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
++VGNLP+ L +VF G V+ R+ ++ETGR +GFG+V
Sbjct: 305 RSYGDQTSPESDTLFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQF 364
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
SS E A AAL+G L+GRAIR++ + R
Sbjct: 365 SSIDEAKAAHAALNGHELEGRAIRLDFSTPR 395
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+++GNL W VD +++ FSE G++ R+V DRETGRSRGFG+V +S + A+ A
Sbjct: 213 LFIGNLSWNVDEEWVQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNSAADAAKAMEAK 272
Query: 342 DGQNLDGRAIRVNVAEDRQ 360
G +LDGR I ++ A RQ
Sbjct: 273 KGTDLDGRTINLDYAAPRQ 291
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 26/109 (23%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
PE LFVGNLP+ + L H +FG QG + + +
Sbjct: 313 PESDTLFVGNLPFSATEDAL-----------------HEVFGAQGSVLGI---------R 346
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+ +ET R +GFG+V S+++EA+ A + ++++GR + ++ + PR
Sbjct: 347 LPTEQETGRPKGFGYVQFSSIDEAKAAHAALNGHELEGRAIRLDFSTPR 395
>gi|297823333|ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506 [Arabidopsis lyrata subsp.
lyrata]
gi|297325388|gb|EFH55808.1| hypothetical protein ARALYDRAFT_482506 [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 110/223 (49%), Gaps = 37/223 (16%)
Query: 139 QEESGEEGVFEEEEFVEPPED---AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHF 195
+E S EE +EE+ E + KLFV NLP+ + ++ LF + GTV E
Sbjct: 71 KETSAEEETSQEEKTEETQKSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVE----- 125
Query: 196 LFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGR 255
I ++ ++RGF FVTM++ EEA+ A++ F + GR
Sbjct: 126 ----------------------IIRQKDGKNRGFAFVTMASGEEAQAAIDKFDTSQVSGR 163
Query: 256 LLTVN------KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG-KVVN 308
+++VN K P+ +P + ++YV NL W+ + L ++F+ V+
Sbjct: 164 IISVNFARRFKKPTPKPPNDLPSPPPGDTRHKLYVSNLAWKARSTHLRELFTASDFNPVS 223
Query: 309 ARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAI 351
ARVV+ GRS G+GFV+ ++ E DAIA LDG+ + GR I
Sbjct: 224 ARVVFADPEGRSSGYGFVSFATREEAEDAIAKLDGKEIMGRPI 266
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++V NLPW + + ++F + G V N ++ ++ G++RGF FVTM+S E AI
Sbjct: 96 KLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKD-GKNRGFAFVTMASGEEAQAAIDK 154
Query: 341 LDGQNLDGRAIRVNVA 356
D + GR I VN A
Sbjct: 155 FDTSQVSGRIISVNFA 170
>gi|449445537|ref|XP_004140529.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 286
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 109/236 (46%), Gaps = 36/236 (15%)
Query: 127 EGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTV 186
+ E + E + + EG +E + +L+V NLP D +L +F+ GTV
Sbjct: 69 DNESALTEEAIVEGDVKSEGSLSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTV 128
Query: 187 EIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 246
AEV N ET S+G G+VTM ++ A+ ++
Sbjct: 129 LAAEVS--------------------------RNPETGISKGCGYVTMGSINSAKVSITA 162
Query: 247 FHRYDIDGRLLTVNKAAPRGTQPER------APR---VFEPGFRIYVGNLPWEVDNARLE 297
D+ GR + V A ++ +P+ ++E +++YVGNL W+V L
Sbjct: 163 LDGSDVGGREMRVRFAVDMNSKKRNLNNLHSSPKKNIIYESPYKVYVGNLSWDVKPGDLR 222
Query: 298 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 353
+FS G VV+A+V+ DR G+SR +GF++ SS E DA +LDG + R + V
Sbjct: 223 NLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAE-RDASISLDGTEYNNRKLVV 277
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YV NLP D A L ++F +G V+ A V + ETG S+G G+VTM S +I AL
Sbjct: 104 LYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKVSITAL 163
Query: 342 DGQNLDGRAIRVNVAED 358
DG ++ GR +RV A D
Sbjct: 164 DGSDVGGREMRVRFAVD 180
>gi|449518978|ref|XP_004166512.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 284
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 109/236 (46%), Gaps = 36/236 (15%)
Query: 127 EGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTV 186
+ E + E + + EG +E + +L+V NLP D +L +F+ GTV
Sbjct: 67 DNESALTEEAIVEGDVKSEGSLSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTV 126
Query: 187 EIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 246
AEV N ET S+G G+VTM ++ A+ ++
Sbjct: 127 LAAEVS--------------------------RNPETGISKGCGYVTMGSINSAKVSITA 160
Query: 247 FHRYDIDGRLLTVNKAAPRGTQPER------APR---VFEPGFRIYVGNLPWEVDNARLE 297
D+ GR + V A ++ +P+ ++E +++YVGNL W+V L
Sbjct: 161 LDGSDVGGREMRVRFAVDMNSKKRNLNNLHSSPKKNIIYESPYKVYVGNLSWDVKPGDLR 220
Query: 298 QVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 353
+FS G VV+A+V+ DR G+SR +GF++ SS E DA +LDG + R + V
Sbjct: 221 NLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAE-RDASISLDGTEYNNRKLVV 275
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 46/77 (59%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YV NLP D A L ++F +G V+ A V + ETG S+G G+VTM S +I AL
Sbjct: 102 LYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKVSITAL 161
Query: 342 DGQNLDGRAIRVNVAED 358
DG ++ GR +RV A D
Sbjct: 162 DGSDVGGREMRVRFAVD 178
>gi|115474525|ref|NP_001060859.1| Os08g0117100 [Oryza sativa Japonica Group]
gi|50725630|dbj|BAD33097.1| putative RNA-binding protein RNP-D precursor [Oryza sativa Japonica
Group]
gi|113622828|dbj|BAF22773.1| Os08g0117100 [Oryza sativa Japonica Group]
gi|125559951|gb|EAZ05399.1| hypothetical protein OsI_27607 [Oryza sativa Indica Group]
gi|215704603|dbj|BAG94231.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 319
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 109/236 (46%), Gaps = 38/236 (16%)
Query: 136 GERQEESGEEGVFEEE-EFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFH 194
GE E+ EEG E +LFV NLP D + L LF+ GTV E+
Sbjct: 109 GESHEDDQEEGSGSGEGRRPRRSRPRELFVCNLPRRCDVDDLYELFKPYGTVLSVEIS-- 166
Query: 195 FLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDG 254
+ ET SRG GFVTM ++ EA A+ +D+DG
Sbjct: 167 ------------------------RDPETGLSRGCGFVTMRSLPEARTAMNALDGFDLDG 202
Query: 255 RLLTVNKAAP-----RGTQPERAP----RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 305
R + V ++ R P +FE +IYVGN+ W V+ L + FS+ G
Sbjct: 203 REMLVKLSSDVVSKRRNINMTHTPPVKDHIFESPHKIYVGNIAWSVEPQELREYFSQCGT 262
Query: 306 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA-EDRQ 360
VV+ R++ DR+ GR R +GF++ +S EL A+ LD + GR I V A E+RQ
Sbjct: 263 VVSTRLLTDRKGGRGRVYGFLSFASAEELEAAL-KLDNTHFHGRNILVRQAHEERQ 317
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 106/206 (51%), Gaps = 34/206 (16%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FVG L ++VD++ L FE G V A +V+++R
Sbjct: 198 VFVGQLSWNVDNDWLKSEFESCGEVVSA--------------------------RVVFDR 231
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ--PERAPRVFE-- 277
++ +SRGFG+V + + + KA+E +IDGR + VN A R E+ RVF
Sbjct: 232 DSQKSRGFGYVEFADLGSSAKAIEK-DGSEIDGRAIRVNYATQRKPNEAAEKRARVFNDK 290
Query: 278 ---PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
P +++G+L + V ++ + F +HG V + R+ DR+TG +GFG+V SS +
Sbjct: 291 QSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDA 350
Query: 335 NDAIAALDGQNLDGRAIRVNVAEDRQ 360
A+ A++G + GRAIRV+ A +Q
Sbjct: 351 TAALKAMNGAEIAGRAIRVDFAPPKQ 376
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 125/249 (50%), Gaps = 36/249 (14%)
Query: 121 SDWGEPEGEDTVVEAGE-RQEESGEEGVFEEEEFVEPPEDAK-LFVGNLPYDVDSEKLAM 178
++ +P+ E V + G+ +++ E+G ++ + + D K LFVG L ++VD + L
Sbjct: 360 TEMSDPKPETPVAQNGKNKRKGDTEDGSAKKAKTDDASGDIKNLFVGGLSWNVDDDWLKK 419
Query: 179 LFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVE 238
FEK G V A +VI R T+RS+GFG+V ++ E
Sbjct: 420 EFEKFGEVISA--------------------------RVITERGTERSKGFGYVDFASPE 453
Query: 239 EAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF------EPGFRIYVGNLPWEVD 292
+A KAVE +IDGR + V+ +AP+ +P + R F P +++GNLP+
Sbjct: 454 DARKAVEAMAGTEIDGRTINVDFSAPKPERPPQEKRSFGQEELSAPTTTLFIGNLPFSAT 513
Query: 293 NARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA--IAALDGQNLDGRA 350
+ + FSE+G + + R+ D ET R +GFG+V +++ A + DG +D R
Sbjct: 514 QDSVYEAFSEYGDINSVRLPTDPETERIKGFGYVEFATQEAATAAVNVGRGDGIYIDQRQ 573
Query: 351 IRVNVAEDR 359
R++ ++ R
Sbjct: 574 ARLDYSQPR 582
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++VG L W VD+ L++ F + G+V++ARV+ +R T RS+GFG+V +S + A+ A+
Sbjct: 403 LFVGGLSWNVDDDWLKKEFEKFGEVISARVITERGTERSKGFGYVDFASPEDARKAVEAM 462
Query: 342 DGQNLDGRAIRVNVAEDRQRR 362
G +DGR I V+ + + R
Sbjct: 463 AGTEIDGRTINVDFSAPKPER 483
>gi|168033888|ref|XP_001769446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679366|gb|EDQ65815.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 108
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 63/79 (79%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VGNL W D LE +FS++G+V+ AR+ +R++GRSRGFGFVT+SSETE+N AI +
Sbjct: 25 KLFVGNLSWRCDEEALETLFSDYGRVLEARIATERDSGRSRGFGFVTLSSETEVNAAIES 84
Query: 341 LDGQNLDGRAIRVNVAEDR 359
LDG + DGR +RVN+A D+
Sbjct: 85 LDGADYDGRELRVNLAGDK 103
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 45/103 (43%), Gaps = 26/103 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVGNL + D E L LF G V A ++
Sbjct: 25 KLFVGNLSWRCDEEALETLFSDYGRVLEA--------------------------RIATE 58
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA 263
R++ RSRGFGFVT+S+ E A+E D DGR L VN A
Sbjct: 59 RDSGRSRGFGFVTLSSETEVNAAIESLDGADYDGRELRVNLAG 101
>gi|260943806|ref|XP_002616201.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
gi|238849850|gb|EEQ39314.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 33/209 (15%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E A LFVG L ++VD E L FE+AG V A +V
Sbjct: 179 EPATLFVGRLSWNVDDEWLKREFEEAGGVISA--------------------------RV 212
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP---ERAPR 274
+ R T +SRG+G+V S+ AEKA+ +IDGR + ++ + + P +RA +
Sbjct: 213 MIERSTGKSRGYGYVDFSSKAAAEKALNELQGKEIDGRPVNLDMSTGKPKTPASNDRAKK 272
Query: 275 VFE----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
+ P +++GNL + + +L ++F E+G VV+ R+ +T + +GFG+V SS
Sbjct: 273 FGDVPSAPSDTLFIGNLSFNTERNKLFEIFGEYGTVVSCRLPTHPDTQQPKGFGYVQFSS 332
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDR 359
E +A+ +L+G+ LDGR R++ + R
Sbjct: 333 VEEAQNALNSLNGEYLDGRPCRLDFSTPR 361
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 56/92 (60%)
Query: 270 ERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
E P E ++VG L W VD+ L++ F E G V++ARV+ +R TG+SRG+G+V S
Sbjct: 171 EETPEASEEPATLFVGRLSWNVDDEWLKREFEEAGGVISARVMIERSTGKSRGYGYVDFS 230
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
S+ A+ L G+ +DGR + ++++ + +
Sbjct: 231 SKAAAEKALNELQGKEIDGRPVNLDMSTGKPK 262
>gi|392569148|gb|EIW62322.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 556
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 34/205 (16%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FVG L ++VD++ LA F + G V A V+ +R
Sbjct: 299 IFVGRLSWNVDNDWLAQEFAECGEVISARVQM--------------------------DR 332
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV------ 275
T +SRGFG+V +T E E A+ + + +IDGR + ++K+ + R R
Sbjct: 333 NTGKSRGFGYVEFATTEAVEAAL-LLNGKEIDGRPVNIDKSEQKDKGAAREKRAEKFGDS 391
Query: 276 -FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
EP ++VGNL W+ ++ +VF EHG V + R+ DRETGR +GFG+V +
Sbjct: 392 ASEPSAVLFVGNLSWDCTEDQVWEVFGEHGDVKSVRLPTDRETGRPKGFGYVEFTDIETA 451
Query: 335 NDAIAALDGQNLDGRAIRVNVAEDR 359
A L G + GR IR++ ++ R
Sbjct: 452 KKAFEGLSGTEVAGRPIRLDYSQPR 476
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
I+VG L W VDN L Q F+E G+V++ARV DR TG+SRGFG+V ++ TE +A L
Sbjct: 299 IFVGRLSWNVDNDWLAQEFAECGEVISARVQMDRNTGKSRGFGYVEFAT-TEAVEAALLL 357
Query: 342 DGQNLDGRAIRVNVAEDRQR 361
+G+ +DGR + ++ +E + +
Sbjct: 358 NGKEIDGRPVNIDKSEQKDK 377
>gi|311780287|gb|ADQ08684.1| putative glycine-rich RNA-binding protein 1 [Malus hupehensis]
Length = 164
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W DN LE+ FS++G+++ ++++ DRETGRSRGFGFVT SE + DAI
Sbjct: 8 FRCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D+E L F + G EI E K +I +
Sbjct: 9 RCFVGGLAWATDNEALERAFSQYG--EIIESK------------------------IIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + + A+E + ++DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFGSEQAMRDAIEGMNGQNLDGRNITVNEA 84
>gi|296142019|gb|ADG96008.1| putative glycine-rich RNA-binding protein 1 [Malus prunifolia]
Length = 171
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W DN LE+ FS++G+++ ++++ DRETGRSRGFGFVT SE + DAI
Sbjct: 8 FRCFVGGLAWATDNEALERAFSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D+E L F + G EI E K +I +
Sbjct: 9 RCFVGGLAWATDNEALERAFSQYG--EIIESK------------------------IIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + + A+E + ++DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFGSEQAMRDAIEGMNGQNLDGRNITVNEA 84
>gi|239608318|gb|EEQ85305.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ER-3]
gi|327349518|gb|EGE78375.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ATCC 18188]
Length = 512
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 36/234 (15%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFL 196
+R+ E EE ++ VE E LFVGNL ++VD E L FE+ G
Sbjct: 238 KRKAEDDEELAAPKKTKVESSEGGNLFVGNLSWNVDEEWLRSEFEEFG------------ 285
Query: 197 FGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRL 256
+S ++++ +R++ RSRGFG+V +A KA ++DGR
Sbjct: 286 --------------ELSGVRIVTDRDSGRSRGFGYVEFVNAADAAKAHAAKKDVELDGRK 331
Query: 257 LTVN------KAAPRGTQPERAPRVFEPGF----RIYVGNLPWEVDNARLEQVFSEHGKV 306
L ++ AAPR RA + +++GN+ + D + + FSEHG +
Sbjct: 332 LNIDFANARSNAAPRERAQSRAQNFGDQASPESDTLFIGNISFSADENMISEAFSEHGSI 391
Query: 307 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
+ R+ D E+GR +GFG+V SS E A L+G +L GR +R++ + RQ
Sbjct: 392 LGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQTLNGADLGGRPMRLDFSTPRQ 445
>gi|345569038|gb|EGX51907.1| hypothetical protein AOL_s00043g641 [Arthrobotrys oligospora ATCC
24927]
Length = 512
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 33/209 (15%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E LFVG L ++VD + L FE TVE A +V
Sbjct: 251 ESKTLFVGQLSWNVDEDWLRREFEDVATVENA--------------------------RV 284
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+++ + +RS+G G+V +T +AEKA+ +IDGR + ++ R R +
Sbjct: 285 VWDNQRNRSKGIGYVDFATRADAEKALAEKQGAEIDGRPINLDFTTARQNNNNSQDRARK 344
Query: 278 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
P ++VGNL + D L SEHG+V + R+ D++TG +GF +VT S+
Sbjct: 345 FGDSESPPSDTLFVGNLSFNADEEALGAAMSEHGEVTSVRIPTDKDTGNKKGFAYVTFST 404
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDR 359
E A AA++GQ + GR+IR + ++ R
Sbjct: 405 IDEAKKAHAAMNGQQVCGRSIRTDYSQPR 433
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++VG L W VD L + F + V NARVV+D + RS+G G+V ++ + A+A
Sbjct: 255 LFVGQLSWNVDEDWLRREFEDVATVENARVVWDNQRNRSKGIGYVDFATRADAEKALAEK 314
Query: 342 DGQNLDGRAIRVNVAEDRQ 360
G +DGR I ++ RQ
Sbjct: 315 QGAEIDGRPINLDFTTARQ 333
>gi|261203287|ref|XP_002628857.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239586642|gb|EEQ69285.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
Length = 510
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 36/234 (15%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFL 196
+R+ E EE ++ VE E LFVGNL ++VD E L FE+ G +
Sbjct: 236 KRKAEDDEELAAPKKTKVESSEGGNLFVGNLSWNVDEEWLRSEFEEFGEL---------- 285
Query: 197 FGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRL 256
S ++++ +R++ RSRGFG+V +A KA ++DGR
Sbjct: 286 ----------------SGVRIVTDRDSGRSRGFGYVEFVDAADAAKAHAAKKDVELDGRK 329
Query: 257 LTVN------KAAPRGTQPERAPRVFEPGF----RIYVGNLPWEVDNARLEQVFSEHGKV 306
L ++ AAPR RA + +++GN+ + D + + FSEHG +
Sbjct: 330 LNIDFANARSNAAPRERAQSRAQNFGDQASPESDTLFIGNISFSADENMISEAFSEHGSI 389
Query: 307 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
+ R+ D E+GR +GFG+V SS E A L+G +L GR +R++ + RQ
Sbjct: 390 LGVRLPTDPESGRPKGFGYVQFSSVDEARSAFQTLNGADLGGRPMRLDFSTPRQ 443
>gi|351725469|ref|NP_001238373.1| glycine-rich RNA-binding protein [Glycine max]
gi|5726567|gb|AAD48471.1|AF169205_1 glycine-rich RNA-binding protein [Glycine max]
Length = 160
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 59/78 (75%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE+ FS++G++V +++ DRETGRSRGFGFVT +SE + DAI
Sbjct: 8 YRCFVGGLAWATDDHALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIG 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
A++GQNLDGR I VN A+
Sbjct: 68 AMNGQNLDGRNITVNEAQ 85
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F + G EI E K +I +
Sbjct: 9 RCFVGGLAWATDDHALERAFSQYG--EIVETK------------------------IIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT ++ + + A+ + ++DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFASEQSMKDAIGAMNGQNLDGRNITVNEA 84
>gi|410080926|ref|XP_003958043.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
gi|372464630|emb|CCF58908.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
Length = 412
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 32/208 (15%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E A +FVG L + +D E L FE G V A +V
Sbjct: 163 EPATIFVGRLSWSIDDEWLKNEFEHIGGVIGA--------------------------RV 196
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN--KAAPRGTQPERAPRV 275
IY R TDRSRG+G+V E AEKAV+ H +IDGR + + + P +RA +
Sbjct: 197 IYERGTDRSRGYGYVDFENKEYAEKAVKEMHGKEIDGREINCDMSTSKPAAGNNDRAKKF 256
Query: 276 ----FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
EP +++GNL + D + ++FS+ G++V+ R+ ET + +GFG+V ++
Sbjct: 257 GDVPSEPSETLFLGNLSFNADRDNISEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYTNV 316
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDR 359
+ A+ AL G+ +D R +R++ + R
Sbjct: 317 EDAKKALDALQGEYIDNRPVRLDFSTPR 344
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 28/114 (24%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
EP E LF+GNL ++ D + ++ +F K G + + H
Sbjct: 262 EPSE--TLFLGNLSFNADRDNISEMFSKFGEIVSVRIPTH-------------------- 299
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ 268
ET++ +GFG+V + VE+A+KA++ ID R + ++ + PR Q
Sbjct: 300 ------PETEQPKGFGYVQYTNVEDAKKALDALQGEYIDNRPVRLDFSTPRPPQ 347
>gi|356508388|ref|XP_003522939.1| PREDICTED: uncharacterized protein LOC100806292 [Glycine max]
Length = 185
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 59/78 (75%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE+ FS +G++V ++V+ DRETGRSRGFGFVT +SE + DAI
Sbjct: 8 YRCFVGGLAWATDSDALEKAFSHYGEIVESKVIIDRETGRSRGFGFVTFASEQAMKDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQNLDGR+I VN A+
Sbjct: 68 GMNGQNLDGRSITVNEAQ 85
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + DS+ L F G EI E K VI +
Sbjct: 9 RCFVGGLAWATDSDALEKAFSHYG--EIVESK------------------------VIID 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT ++ + + A+E + ++DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFASEQAMKDAIEGMNGQNLDGRSITVNEA 84
>gi|300121030|emb|CBK21412.2| unnamed protein product [Blastocystis hominis]
Length = 296
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 85/142 (59%), Gaps = 4/142 (2%)
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP---RGTQPER 271
LQ++Y+R T R RGFGFV+ ST + KA+E + I+GR + V A + ++ R
Sbjct: 32 LQIVYDRNTGRPRGFGFVSFSTEDGLNKAMEQ-NGSLINGREIRVEVAKGSLGKNSENVR 90
Query: 272 APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
R + +++V +L W + L FS+ GK+ + +++ DR+TGRSRG G V S+
Sbjct: 91 QNRNYNDENKVFVSSLSWNTTDEMLRDAFSQCGKIEHYKILTDRQTGRSRGMGIVKFSTR 150
Query: 332 TELNDAIAALDGQNLDGRAIRV 353
E+N+AI+ ++G LDGR I V
Sbjct: 151 EEMNNAISTMNGSTLDGRQIAV 172
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 306 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
+V ++VYDR TGR RGFGFV+ S+E LN A+ +G ++GR IRV VA+
Sbjct: 29 LVTLQIVYDRNTGRPRGFGFVSFSTEDGLNKAMEQ-NGSLINGREIRVEVAK 79
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 26/102 (25%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
++ K+FV +L ++ E L F + G +E H+ ++
Sbjct: 97 DENKVFVSSLSWNTTDEMLRDAFSQCGKIE------HY--------------------KI 130
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV 259
+ +R+T RSRG G V ST EE A+ + +DGR + V
Sbjct: 131 LTDRQTGRSRGMGIVKFSTREEMNNAISTMNGSTLDGRQIAV 172
>gi|440802763|gb|ELR23692.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 425
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 98/214 (45%), Gaps = 35/214 (16%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
E P +A F+GNLP+ + + + FE G V AV+ V L
Sbjct: 175 ETPSNANFFIGNLPWSAEEDTVKQFFESQG---------------------VSAVYAVRL 213
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA------APRGTQ 268
I +R+T R +GFG++ S + AV + D +GR L V+KA A R T+
Sbjct: 214 ---ITDRDTGRKKGFGYIETSASDV--DAVLALNGADFEGRELKVDKANERPANADRDTK 268
Query: 269 PERAPRVFEPGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 325
P APR +++GNL + + + G V R+VYDRET R RGFG+
Sbjct: 269 PRDAPRQSGEAATDGNVFLGNLSFNSTEDSIWAALEQFGTVKAVRIVYDRETQRPRGFGY 328
Query: 326 VTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
N AIAA ++DGR IR++ A R
Sbjct: 329 CEFEDADTANKAIAASGTVDVDGRQIRIDTATAR 362
>gi|254585491|ref|XP_002498313.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
gi|238941207|emb|CAR29380.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
Length = 468
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 111/229 (48%), Gaps = 40/229 (17%)
Query: 133 VEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVK 192
E E QEES ++ E A +FVG L +++D + L FE G V+ A
Sbjct: 216 AEVDEEQEESSKKAKLSGEP-------ATIFVGRLSWNIDDQWLKNEFEHIGGVQSA--- 265
Query: 193 FHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI 252
+VIY R + RSRG+G+V + AEKAV+ H ++
Sbjct: 266 -----------------------RVIYERGSTRSRGYGYVDFTDKSYAEKAVKEMHGKEL 302
Query: 253 DGRLLTVNKAAPRGT---QPERAPRV----FEPGFRIYVGNLPWEVDNARLEQVFSEHGK 305
DGR + + + + T + +RA R EP +++GNL + D ++ ++FS HG+
Sbjct: 303 DGRPINCDMSTSKPTVNPREDRAKRFGDMPSEPSDTLFLGNLSFNADRDQIYELFSPHGE 362
Query: 306 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 354
V++ R+ ET + +GFG+V +S A+ L G+ +D R +R++
Sbjct: 363 VISVRIPTHPETEQPKGFGYVQYASVDSAQKALETLQGEYIDNRPVRLD 411
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
I+VG L W +D+ L+ F G V +ARV+Y+R + RSRG+G+V + ++ A+ +
Sbjct: 238 IFVGRLSWNIDDQWLKNEFEHIGGVQSARVIYERGSTRSRGYGYVDFTDKSYAEKAVKEM 297
Query: 342 DGQNLDGRAIR---------VNVAEDRQRR 362
G+ LDGR I VN EDR +R
Sbjct: 298 HGKELDGRPINCDMSTSKPTVNPREDRAKR 327
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 27/109 (24%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P D LF+GNL ++ D +++ LF G V + H
Sbjct: 335 PSDT-LFLGNLSFNADRDQIYELFSPHGEVISVRIPTH---------------------- 371
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET++ +GFG+V ++V+ A+KA+E ID R + ++ + P+
Sbjct: 372 ----PETEQPKGFGYVQYASVDSAQKALETLQGEYIDNRPVRLDFSTPK 416
>gi|351725105|ref|NP_001235801.1| uncharacterized protein LOC100305467 [Glycine max]
gi|255625591|gb|ACU13140.1| unknown [Glycine max]
Length = 156
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 58/78 (74%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W DN LE+ FS++G VV ++++ DRETGRSRGFGFVT +SE + DAI
Sbjct: 8 YRCFVGGLAWATDNYDLEKAFSQYGDVVESKIINDRETGRSRGFGFVTFASEDSMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D+ L F + G ++ E K +I +
Sbjct: 9 RCFVGGLAWATDNYDLEKAFSQYG--DVVESK------------------------IIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT ++ + A+E + ++DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFASEDSMRDAIEGMNGQNLDGRNITVNEA 84
>gi|297843010|ref|XP_002889386.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335228|gb|EFH65645.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 298
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 37/223 (16%)
Query: 141 ESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQ 200
E+ + V E E V+ P +L+V N+P D +L +F+ GTV EV
Sbjct: 94 ETNGDSVVSEAEPVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVS-------- 145
Query: 201 GFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN 260
N +T SRG G+VTM ++ A+ A+ ++ GR + V
Sbjct: 146 ------------------RNPQTGESRGSGYVTMGSINSAKIAIASLDGTEVGGREMRVR 187
Query: 261 KAAPRGTQPERAPRV----------FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNAR 310
+ R P V +E +++YVGNLPW L FS+ G +V+ R
Sbjct: 188 YSVDMNPGARRNPEVLNSTPKKILMYESQYKVYVGNLPWFTQPDGLRDHFSKFGTIVSTR 247
Query: 311 VVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 353
V++DR+TG++R F F++ ++ E DA +L+G +GR I V
Sbjct: 248 VLHDRKTGKNRVFAFLSFTNSEE-RDAALSLNGTQYEGRRIIV 289
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 268 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
+P + PR E +YV N+P D A+L +F G V++ V + +TG SRG G+VT
Sbjct: 105 EPVKKPRPCE----LYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVT 160
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAED 358
M S AIA+LDG + GR +RV + D
Sbjct: 161 MGSINSAKIAIASLDGTEVGGREMRVRYSVD 191
>gi|389633057|ref|XP_003714181.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|351646514|gb|EHA54374.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|440473688|gb|ELQ42470.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae Y34]
gi|440486239|gb|ELQ66126.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae P131]
Length = 486
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 104/210 (49%), Gaps = 35/210 (16%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFVGNL ++VD LA F+ GTV A +VI +R
Sbjct: 241 LFVGNLSWNVDDAMLAEEFKFCGTVTSA--------------------------RVITDR 274
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF- 280
E+ RS+GFG+V +T EEAEKA IDGR + V+ + + T A +
Sbjct: 275 ESGRSKGFGYVDFATPEEAEKAHGEKQGAFIDGREIKVDFSTGKATNSNDAAGARAKKYG 334
Query: 281 --------RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
++VGNLP++ D + FSE +V + R+ ++E+GR +GFG+VT +S
Sbjct: 335 DTVSPESDTLFVGNLPFDADEDSVGAFFSEVAEVKSLRLPTEQESGRRKGFGYVTFNSVE 394
Query: 333 ELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
+ A L+GQ+++GR R++ + R R
Sbjct: 395 DAKSAFEQLNGQSINGRNCRLDYSTPRPPR 424
>gi|388521331|gb|AFK48727.1| unknown [Lotus japonicus]
Length = 285
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 106/205 (51%), Gaps = 31/205 (15%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+V NLP+ + + + LF + GTV E+ + G G
Sbjct: 87 KLYVFNLPWSMSAADIKDLFGQCGTVTDVEI----IRGKDG------------------- 123
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA---PRGTQPERAPRVFE 277
R +G+ FVTM++ EEA+ AV+ F ++ GR+L V A +P E
Sbjct: 124 ----RGKGYAFVTMASGEEAQAAVDKFDTLELSGRILRVELAKRFKKPSPPGPPSPPPSE 179
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKV-VNARVVYDRETGRSRGFGFVTMSSETELND 336
IY NL W+V + L + F+E+ K ++AR+V+D +G++ G+GF++ ++ E
Sbjct: 180 ARHVIYASNLAWKVRSTHLREFFTENFKAPLSARIVFDTPSGKTTGYGFISYLTKEEAEA 239
Query: 337 AIAALDGQNLDGRAIRVNVAEDRQR 361
AI+ALDG+ L GR++ + ++E + +
Sbjct: 240 AISALDGKELMGRSLFLKISEKKVK 264
>gi|356531425|ref|XP_003534278.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 282
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 108/216 (50%), Gaps = 36/216 (16%)
Query: 151 EEFVEP--PED--AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
E+ +EP P D KL+V NL + + + + LF + GTV E
Sbjct: 60 EQTLEPIQPTDNVKKLYVVNLSWSLTAADITDLFAQCGTVTDVE---------------- 103
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA--- 263
I + RS+G+ FVTM++ EEA+ AV+ F Y++ GR++ V A
Sbjct: 104 -----------IIKSKDGRSKGYAFVTMASGEEAQAAVDKFDSYELSGRIIRVELAKRLK 152
Query: 264 -PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV-VNARVVYDRETGRSR 321
P P PR E IY NL W+ + L QVF+E+ K +ARVV+D +GRS
Sbjct: 153 KPPSLPPPPGPRPGETRHVIYASNLAWKARSTHLRQVFTENFKTPSSARVVFDSPSGRSA 212
Query: 322 GFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
G+GFV+ + + AI+ +DG+ L GR +R+ +E
Sbjct: 213 GYGFVSFLTREDAEAAISTVDGKELMGRPLRLKFSE 248
>gi|255713222|ref|XP_002552893.1| KLTH0D03916p [Lachancea thermotolerans]
gi|238934273|emb|CAR22455.1| KLTH0D03916p [Lachancea thermotolerans CBS 6340]
Length = 505
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 99/211 (46%), Gaps = 33/211 (15%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E A +FVG L + VD E L FE G V A +V
Sbjct: 254 EPATIFVGRLSWSVDDEWLKTEFEPIGGVISA--------------------------RV 287
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN--KAAPRGTQPERAPRV 275
I R TDRSRG+G+V AEKAV+ H +IDGR + + + P G +
Sbjct: 288 IMERGTDRSRGYGYVDFENKFYAEKAVKEMHGKEIDGRPINCDMSTSKPAGNPRNDRAKQ 347
Query: 276 F-----EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
F +P +++GNL + D + + F+EHG+VV+ R+ ET + +GFG+V SS
Sbjct: 348 FGDTPSQPSDTLFLGNLSFNADRDNIFETFAEHGEVVSVRLPTHPETNQPKGFGYVQYSS 407
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
E A AL G +D R +R++ + + R
Sbjct: 408 VDEAQKAFEALQGHYIDNRPVRLDFSTPKPR 438
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 32/208 (15%)
Query: 158 EDAK-LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
ED+K +FVG L ++VD++ LA F G V A V+
Sbjct: 318 EDSKTVFVGRLSWNVDNDWLAQEFADCGEVVSARVQM----------------------- 354
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
+R T +SRGFGFV +T E A AV + + +IDGR + ++K + + PER + F
Sbjct: 355 ---DRNTGKSRGFGFVEFATAEGANAAVALNGQKEIDGRAVNLDKTSAKPADPERRAKAF 411
Query: 277 -----EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
P ++VGN+ +++ L +VF+E+G+V + R+ DR+T R +G+G+V
Sbjct: 412 GDSTSAPSSVLFVGNVSFDMTEDGLWEVFAEYGEVKSVRLPTDRDTQRLKGYGYVEFVDV 471
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDR 359
A G ++ GR IR++ A+ R
Sbjct: 472 ESAKKAFEGARGMDVGGRTIRLDYAQPR 499
>gi|356538787|ref|XP_003537882.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 170
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 59/83 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W N LE+ FS +G +V ++V+ DRETGRSRGFGFVT +SE + DAIA
Sbjct: 8 FRCFVGGLAWVTGNDALEKAFSIYGDIVESKVINDRETGRSRGFGFVTFASEQSMKDAIA 67
Query: 340 ALDGQNLDGRAIRVNVAEDRQRR 362
++GQ+LDGR I VN A+ R R
Sbjct: 68 GMNGQDLDGRNITVNEAQTRASR 90
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 37/53 (69%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ 268
+VI +RET RSRGFGFVT ++ + + A+ + D+DGR +TVN+A R ++
Sbjct: 38 KVINDRETGRSRGFGFVTFASEQSMKDAIAGMNGQDLDGRNITVNEAQTRASR 90
>gi|452821825|gb|EME28851.1| glycine-rich RNA binding protein isoform 1 [Galdieria sulphuraria]
Length = 149
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 62/82 (75%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R++VG LPW V L + FS++G+VV+ARVV +RETGRSRGFGFV+ + + + + IAA
Sbjct: 8 RVFVGGLPWSVGEDDLRETFSKYGEVVDARVVVERETGRSRGFGFVSYAEGSSVEECIAA 67
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
LDGQ++ GR IRVN A R++R
Sbjct: 68 LDGQDMQGRTIRVNKAMSREQR 89
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 26/108 (24%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
ED ++FVG LP+ V + L F K G V A +V
Sbjct: 5 EDNRVFVGGLPWSVGEDDLRETFSKYGEVVDA--------------------------RV 38
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+ RET RSRGFGFV+ + E+ + D+ GR + VNKA R
Sbjct: 39 VVERETGRSRGFGFVSYAEGSSVEECIAALDGQDMQGRTIRVNKAMSR 86
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 33/209 (15%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E +FVG L ++VD ++LA F + G V A V
Sbjct: 341 ESKTIFVGRLSWNVDDDQLASEFAECGEVVSARVNI------------------------ 376
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERAPRV 275
+R T +SRGFG V + +KA++ + +IDGR + V++A + Q E +
Sbjct: 377 --DRNTGKSRGFGHVEFADASSVQKAIDTMNGKEIDGRPVNVDRAPGLNKNQQRENRAKA 434
Query: 276 F-----EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
F P ++VGNL W+ + + F EHG+V + R+ DRE+GR +GFG+V
Sbjct: 435 FGDSTSAPSSVLFVGNLSWDATEDAVWEAFGEHGEVKSVRLPTDRESGRPKGFGYVEFVD 494
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDR 359
A AL G + GR+IR++ ++ R
Sbjct: 495 VDAAKAAFEALSGTEIGGRSIRLDYSQPR 523
>gi|297733872|emb|CBI15119.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G L + D+ L + F ++G+V+ ARV+ DRETGRSRGFGFVT +S E + AI A
Sbjct: 41 KLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQA 100
Query: 341 LDGQNLDGRAIRVNVAEDRQR 361
LDGQ+L GR +RVN A DR R
Sbjct: 101 LDGQDLHGRRVRVNYATDRAR 121
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 50/112 (44%), Gaps = 26/112 (23%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
+ +KLF+G L Y D L F K G E+ E +
Sbjct: 34 IRCMSSSKLFIGGLSYSTDDTSLREAFHKYG--EVIEAR--------------------- 70
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
VI +RET RSRGFGFVT ++ EEA A++ D+ GR + VN A R
Sbjct: 71 ---VIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDR 119
>gi|363814334|ref|NP_001242808.1| uncharacterized protein LOC100793319 [Glycine max]
gi|255639879|gb|ACU20232.1| unknown [Glycine max]
Length = 289
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 111/219 (50%), Gaps = 33/219 (15%)
Query: 149 EEEEFVEPPEDAK-LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVC 207
E E +P ++ K L+V NL + + + + LF ++GTV E
Sbjct: 68 ETPELTQPTDNVKKLYVVNLSWSLTAADINDLFAQSGTVTDVE----------------- 110
Query: 208 AVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA---- 263
I + RS+G+ FVTM++ EEA+ AV+ F Y++ GR++ V A
Sbjct: 111 ----------IIKSKDGRSKGYAFVTMASGEEAQAAVDKFDSYELSGRIIRVELAKRFKK 160
Query: 264 PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV-VNARVVYDRETGRSRG 322
P P PR E IY NL W+ + L Q+F+E+ K +ARVV+D +GRS G
Sbjct: 161 PPSPPPPPGPRPGETRHVIYASNLAWKARSTHLRQLFAENFKTPSSARVVFDSPSGRSAG 220
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
+GFV+ ++ + AI+ +DG+ L GR +R+ +E + +
Sbjct: 221 YGFVSFLTKEDAEAAISTVDGKELMGRPLRLKFSEKKDK 259
>gi|50286801|ref|XP_445830.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525136|emb|CAG58749.1| unnamed protein product [Candida glabrata]
Length = 425
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 33/206 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E A +FVG L + +D E L FE G V A +V
Sbjct: 174 EPATVFVGRLSWSIDDEWLKQEFEHIGGVVAA--------------------------RV 207
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR--- 274
+Y R TDRSRG+G+V AEKAV+ H +IDGR + V+ + + T R R
Sbjct: 208 MYERGTDRSRGYGYVDFEDKSYAEKAVKEMHGKEIDGRPINVDMSTSKPTVNPREDRQKR 267
Query: 275 ----VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
EP +++GNL + D + ++F + G++++ R+ ET + +GFG+V +S
Sbjct: 268 FGDIPSEPSDTLFLGNLSFNADRDNIYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTS 327
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVA 356
+ A+ AL G+ +D R +R++ +
Sbjct: 328 IDDAKKALEALQGEYIDNRPVRLDYS 353
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 61/105 (58%), Gaps = 10/105 (9%)
Query: 267 TQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
+ P++A EP ++VG L W +D+ L+Q F G VV ARV+Y+R T RSRG+G+V
Sbjct: 164 SSPKKAKTDGEPA-TVFVGRLSWSIDDEWLKQEFEHIGGVVAARVMYERGTDRSRGYGYV 222
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVA---------EDRQRR 362
++ A+ + G+ +DGR I V+++ EDRQ+R
Sbjct: 223 DFEDKSYAEKAVKEMHGKEIDGRPINVDMSTSKPTVNPREDRQKR 267
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LF+GNL ++ D + + +F K G + + H
Sbjct: 279 LFLGNLSFNADRDNIYEIFGKFGEIISVRIPTH--------------------------P 312
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET++ +GFG+V +++++A+KA+E ID R + ++ + P+
Sbjct: 313 ETEQPKGFGYVQYTSIDDAKKALEALQGEYIDNRPVRLDYSTPK 356
>gi|253181|gb|AAB22809.1| NSR1=nucleolin homolog [Saccharomyces cerevisiae, Peptide, 249 aa]
Length = 249
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 33/208 (15%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E A +FVG L + +D E L FE G V A +V
Sbjct: 1 EPATIFVGRLSWSIDDEWLKKEFEHIGGVIGA--------------------------RV 34
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA--PRGTQPERAPRV 275
IY R TDRSRG+G+V AEKA++ +IDGR + + + P G +RA +
Sbjct: 35 IYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSKPAGNN-DRAKKF 93
Query: 276 ----FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
EP +++GNL + D + ++F++HG+VV+ R+ ET + +GFG+V S+
Sbjct: 94 GDTPSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNM 153
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDR 359
+ A+ AL G+ +D R +R++ + R
Sbjct: 154 EDAKKALDALQGEYIDNRPVRLDFSSPR 181
>gi|409049562|gb|EKM59039.1| hypothetical protein PHACADRAFT_249208 [Phanerochaete carnosa
HHB-10118-sp]
Length = 292
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 111/225 (49%), Gaps = 44/225 (19%)
Query: 150 EEEFVEPPEDAK----------LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGN 199
E E VEP + A+ +FVG L ++VD+ L F + G + A V+
Sbjct: 19 EGEAVEPAQKARVDDGSAPTKTIFVGMLSWNVDNAWLESEFAQCGEIVSAHVQ------- 71
Query: 200 QGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV 259
+R T RSRGFGFVT ++ E +KA+E+ + +IDGR + V
Sbjct: 72 -------------------TDRNTGRSRGFGFVTFASPEAVDKALELNGK-EIDGRSINV 111
Query: 260 NKAAPRGTQP--ERAPRVF-----EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVV 312
+K+ + ER R F EP R++VGNL ++ +L +VFS++G + + +
Sbjct: 112 DKSVEKDQNQVRERRARTFGDAPSEPSSRLFVGNLSFDATEEQLWEVFSDYGSIKSVHMP 171
Query: 313 YDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
R++GR +GFG+V A +L GQ + GRAIR+ ++
Sbjct: 172 TSRDSGRPKGFGYVEFEDIESAKKAHESLVGQEIAGRAIRLEFSQ 216
>gi|50305507|ref|XP_452713.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641846|emb|CAH01564.1| KLLA0C11495p [Kluyveromyces lactis]
Length = 445
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E A +FVG L + +D E L FE G V A +V
Sbjct: 194 EPATIFVGRLSWSIDDEWLKTEFEPIGGVISA--------------------------RV 227
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR--- 274
+Y R TDRSRG+G+V AEKA++ H +IDGR + + + ++P APR
Sbjct: 228 MYERGTDRSRGYGYVDFEDKSYAEKAIKEMHGKEIDGRPINCDMST---SKPAGAPRDDR 284
Query: 275 -------VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
EP +++GNL +E D L ++F ++G++V+ R+ ET + +GFG+V
Sbjct: 285 AKKFGDVPSEPSDTLFLGNLSFEADRDNLYEIFGKYGEIVSVRIPTHPETEQPKGFGYVQ 344
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
S + A L G+ ++ R +R++ + +Q
Sbjct: 345 YGSIEDATKAFEGLQGEYINNRPVRLDYSIPKQ 377
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G L + D+ L + F ++G+V+ ARV+ DRETGRSRGFGFVT +S E + AI A
Sbjct: 41 KLFIGGLSYSTDDTSLREAFYKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQA 100
Query: 341 LDGQNLDGRAIRVNVAEDRQR 361
LDGQ+L GR +RVN A DR R
Sbjct: 101 LDGQDLHGRRVRVNYATDRAR 121
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 50/112 (44%), Gaps = 26/112 (23%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
+ +KLF+G L Y D L F K G E+ E +
Sbjct: 34 IRCMSSSKLFIGGLSYSTDDTSLREAFYKYG--EVIEAR--------------------- 70
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
VI +RET RSRGFGFVT ++ EEA A++ D+ GR + VN A R
Sbjct: 71 ---VIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDR 119
>gi|79316226|ref|NP_001030925.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332189111|gb|AEE27232.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 294
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 103/223 (46%), Gaps = 36/223 (16%)
Query: 141 ESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQ 200
E ++ V + E V+ P +L+V N+P D +L +F+ GTV EV
Sbjct: 89 EPNKDSVVSKAEPVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEV--------- 139
Query: 201 GFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN 260
V N +T SRG G+VTM ++ A+ A+ ++ GR + V
Sbjct: 140 ----------------VSRNPQTGESRGSGYVTMGSINSAKIAIASLDGTEVGGREMRVR 183
Query: 261 KAAPRGTQPERAPRV----------FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNAR 310
+ R P V +E ++YVGNLPW L FS+ G +V+ R
Sbjct: 184 YSVDMNPGTRRNPEVLNSTPKKILMYESQHKVYVGNLPWFTQPDGLRNHFSKFGTIVSTR 243
Query: 311 VVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 353
V++DR+TGR+R F F++ +S E DA + +G +GR I V
Sbjct: 244 VLHDRKTGRNRVFAFLSFTSGEE-RDAALSFNGTQYEGRRIIV 285
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 268 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVV-YDRETGRSRGFGFV 326
+P + PR E +YV N+P D A+L +F G V++ VV + +TG SRG G+V
Sbjct: 100 EPVKKPRPCE----LYVCNIPRSYDIAQLLDMFQPFGTVISVEVVSRNPQTGESRGSGYV 155
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAED 358
TM S AIA+LDG + GR +RV + D
Sbjct: 156 TMGSINSAKIAIASLDGTEVGGREMRVRYSVD 187
>gi|356541091|ref|XP_003539016.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 207
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE+ FS++G++V +++ DRETGRSRGFGFVT +SE + DAI
Sbjct: 44 YRCFVGGLAWATDDQALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIE 103
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQNLDGR I VN A+
Sbjct: 104 GMNGQNLDGRNITVNEAQ 121
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D + L F + G EI E K +I +
Sbjct: 45 RCFVGGLAWATDDQALERAFSQYG--EIVETK------------------------IIND 78
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT ++ + + A+E + ++DGR +TVN+A
Sbjct: 79 RETGRSRGFGFVTFASEQSMKDAIEGMNGQNLDGRNITVNEA 120
>gi|356538789|ref|XP_003537883.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 140
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 57/78 (73%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE+ FS +G +V ++++ DRETGRSRGFGFVT +SE + DAI
Sbjct: 8 YRCFVGGLAWATDDHALEKAFSHYGNIVESKIINDRETGRSRGFGFVTFASENSMKDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F G I E K +I +
Sbjct: 9 RCFVGGLAWATDDHALEKAFSHYGN--IVESK------------------------IIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT ++ + A+E + ++DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFASENSMKDAIEGMNGQNLDGRNITVNEA 84
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G L + D+ L + F ++G+V+ ARV+ DRETGRSRGFGFVT +S E + AI A
Sbjct: 41 KLFIGGLSYSTDDTSLREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQA 100
Query: 341 LDGQNLDGRAIRVNVAEDRQR 361
LDGQ+L GR +RVN A DR R
Sbjct: 101 LDGQDLHGRRVRVNYATDRAR 121
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 50/112 (44%), Gaps = 26/112 (23%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
+ +KLF+G L Y D L F K G E+ E +
Sbjct: 34 IRCMSSSKLFIGGLSYSTDDTSLREAFHKYG--EVIEAR--------------------- 70
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
VI +RET RSRGFGFVT ++ EEA A++ D+ GR + VN A R
Sbjct: 71 ---VIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDR 119
>gi|452989554|gb|EME89309.1| hypothetical protein MYCFIDRAFT_149907 [Pseudocercospora fijiensis
CIRAD86]
Length = 500
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 38/213 (17%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LF+GNL ++VD E L FE E E+K +++I +R
Sbjct: 247 LFIGNLSWNVDEEWLTREFE-----EFGELKG---------------------VRIITDR 280
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER---------- 271
++ RS+GFG+V E+A KA+E + ++D R + ++ + PR +
Sbjct: 281 DSGRSKGFGYVEFENAEDAAKALEAKNGAELDNRAIRLDFSVPRQNNAQNPQQRGQERRQ 340
Query: 272 --APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
+ EP ++VGNL ++ + + F EHG + R+ DRE+G +GFG+V M
Sbjct: 341 QYGDKASEPSQTLFVGNLSFDATEDMVREYFEEHGSINGIRLPTDRESGAPKGFGYVEMG 400
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
S E A AL G +L GR +R++ + R R
Sbjct: 401 SIDEAKAAYEALQGADLGGRPMRLDYSTPRPPR 433
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 60/81 (74%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG + + D+ L + F+++G+V+ ARV+ DRETGRSRGFGFVT +S E + AI A
Sbjct: 44 KVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 103
Query: 341 LDGQNLDGRAIRVNVAEDRQR 361
LDGQ+L GR +RVN A DR R
Sbjct: 104 LDGQDLHGRRVRVNYANDRAR 124
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 26/112 (23%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
+ E +K+FVG + + D + L F K G E+ E +
Sbjct: 37 MSSMESSKVFVGGISFSTDDQSLREAFTKYG--EVIEAR--------------------- 73
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
VI +RET RSRGFGFVT ++ EEA A++ D+ GR + VN A R
Sbjct: 74 ---VIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDR 122
>gi|225459201|ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|302142004|emb|CBI19207.3| unnamed protein product [Vitis vinifera]
Length = 294
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 35/208 (16%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCA 208
EEEEF +L N+P+ ++ + LFEK GTV E+ H
Sbjct: 82 EEEEFSR----TRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMH-------------- 123
Query: 209 VFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ 268
R+RG F++M + EEA A+ Y+++GR + VN A P+ +
Sbjct: 124 -------------NKTRNRGLAFISMGSPEEALAALSNLESYELEGRAIKVNYANPQKKK 170
Query: 269 PERAPRVFEP--GFRIYVGNLPWEVDNARLEQVFSE-HGKVVNARVVYDRETGRSRGFGF 325
P +P +P + +++ NLP++ L + FS + VV+A V++ RS G+GF
Sbjct: 171 PS-SPIQHKPVTPYNLFIANLPYQARAKDLREFFSSGNCNVVSAEVIFHENPRRSSGYGF 229
Query: 326 VTMSSETELNDAIAALDGQNLDGRAIRV 353
V+ S+ E + A+++ GQ GR +RV
Sbjct: 230 VSFGSKEEADTALSSFQGQMFMGRPLRV 257
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R+ N+PW + +F ++G V++ + +T R+RG F++M S E A++
Sbjct: 90 RLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKT-RNRGLAFISMGSPEEALAALSN 148
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSS 364
L+ L+GRAI+VN A ++++ S
Sbjct: 149 LESYELEGRAIKVNYANPQKKKPS 172
>gi|449441097|ref|XP_004138320.1| PREDICTED: uncharacterized protein LOC101218446 [Cucumis sativus]
Length = 232
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 60/81 (74%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG + + D+ L + F+++G+V+ ARV+ DRETGRSRGFGFVT +S E + AI A
Sbjct: 44 KVFVGGISFSTDDQSLREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQA 103
Query: 341 LDGQNLDGRAIRVNVAEDRQR 361
LDGQ+L GR +RVN A DR R
Sbjct: 104 LDGQDLHGRRVRVNYANDRAR 124
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 26/112 (23%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
+ E +K+FVG + + D + L F K G E+ E +
Sbjct: 37 MSSMESSKVFVGGISFSTDDQSLREAFTKYG--EVIEAR--------------------- 73
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
VI +RET RSRGFGFVT ++ EEA A++ D+ GR + VN A R
Sbjct: 74 ---VIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDR 122
>gi|147769276|emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]
Length = 294
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 35/208 (16%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCA 208
EEEEF +L N+P+ ++ + LFEK GTV E+ H
Sbjct: 82 EEEEFSR----TRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMH-------------- 123
Query: 209 VFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ 268
R+RG F++M + EEA A+ Y+++GR + VN A P+ +
Sbjct: 124 -------------NKTRNRGLAFISMGSPEEALAALSNLESYELEGRAIKVNYANPQKKK 170
Query: 269 PERAPRVFEP--GFRIYVGNLPWEVDNARLEQVFSE-HGKVVNARVVYDRETGRSRGFGF 325
P +P +P + +++ NLP++ L + FS + VV+A V++ RS G+GF
Sbjct: 171 PS-SPIQHKPVTPYNLFIANLPYQARAKDLREFFSSGNCNVVSAEVIFHENPRRSSGYGF 229
Query: 326 VTMSSETELNDAIAALDGQNLDGRAIRV 353
V+ S+ E + A+++ GQ GR +RV
Sbjct: 230 VSFGSKEEADTALSSFQGQMFMGRPLRV 257
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R+ N+PW + +F ++G V++ + +T R+RG F++M S E A++
Sbjct: 90 RLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKT-RNRGLAFISMGSPEEALAALSN 148
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSS 364
L+ L+GRAI+VN A ++++ S
Sbjct: 149 LESYELEGRAIKVNYANPQKKKPS 172
>gi|50409715|ref|XP_456900.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
gi|49652564|emb|CAG84877.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
Length = 447
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 34/210 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E A LFVG L + +D E L FE G V A +V
Sbjct: 196 EPATLFVGRLSWSIDDEWLRREFEPVGGVISA--------------------------RV 229
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA--PRGTQP--ERAP 273
I R T +SRG+G+V + AEKA++ + ++DGR + ++ + P + P +RA
Sbjct: 230 IMERSTGKSRGYGYVDFDSKSAAEKALQEYQGKELDGRPINLDMSTGKPHASNPNTDRAK 289
Query: 274 RVFE----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
+ + P ++VGNL + + L F E+G VV+ R+ +T + +GFG+V S
Sbjct: 290 QFGDVPSAPSDTLFVGNLSFNAERDSLFNTFGEYGTVVSCRIPTHPDTQQPKGFGYVQFS 349
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAEDR 359
S E A+ AL+G+ LDGRA R++ + R
Sbjct: 350 SVDEAKAALEALNGEYLDGRACRLDFSTPR 379
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 52/86 (60%)
Query: 271 RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
+ P+ E ++VG L W +D+ L + F G V++ARV+ +R TG+SRG+G+V S
Sbjct: 189 KKPKTNEEPATLFVGRLSWSIDDEWLRREFEPVGGVISARVIMERSTGKSRGYGYVDFDS 248
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVA 356
++ A+ G+ LDGR I ++++
Sbjct: 249 KSAAEKALQEYQGKELDGRPINLDMS 274
>gi|297741463|emb|CBI32594.3| unnamed protein product [Vitis vinifera]
Length = 121
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE+ FS+ G+++ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D + L F + G EI E K +I +
Sbjct: 9 RCFVGGLAWATDDQSLERAFSQFG--EILESK------------------------IIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT S+ + A+E + ++DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFSSEQSMRDAIEGMNGQNLDGRNITVNEA 84
>gi|624925|dbj|BAA05170.1| RNA-binding glycine rich protein [Nicotiana sylvestris]
gi|295393567|gb|ADG03639.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 259
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 59/81 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W D L++ FS+HG+V+ ARV+ DR+TGRSRGFGFV+ +S E A+ A
Sbjct: 41 KLFVGGLSWGTDETSLKEAFSQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAASALTA 100
Query: 341 LDGQNLDGRAIRVNVAEDRQR 361
LDGQ+L GR IRVN A ++ R
Sbjct: 101 LDGQDLHGRQIRVNYATEKLR 121
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 26/112 (23%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
+ +KLFVG L + D L F + G E+ E +
Sbjct: 34 IRSMSSSKLFVGGLSWGTDETSLKEAFSQHG--EVIEAR--------------------- 70
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
VI +R+T RSRGFGFV+ ++ EEA A+ D+ GR + VN A +
Sbjct: 71 ---VIMDRDTGRSRGFGFVSFTSTEEAASALTALDGQDLHGRQIRVNYATEK 119
>gi|254572962|ref|XP_002493590.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|238033389|emb|CAY71411.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|328354581|emb|CCA40978.1| Nuclear localization sequence-binding protein [Komagataella
pastoris CBS 7435]
Length = 362
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 100/207 (48%), Gaps = 35/207 (16%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFVG L + +D E L FE G V A +V+ R
Sbjct: 128 LFVGRLSWSIDDEWLKKEFEHIGGVVGA--------------------------RVMMER 161
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-----KAAPRGTQPERAPRVF 276
T RSRG+G+V AEKA+E +IDGR + V+ AAP +RA +
Sbjct: 162 ATGRSRGYGYVDFDNKASAEKALEEMQGKEIDGRPINVDMSNSKPAAPAARNNDRASQYG 221
Query: 277 E----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
+ P +++GNL ++ D L ++FS+HG V + R+ ET + +GFG+V SS
Sbjct: 222 DKRSPPSDTLFLGNLSFQADRDTLFELFSKHGNVTSVRIPTHPETEQPKGFGYVQFSSVD 281
Query: 333 ELNDAIAALDGQNLDGRAIRVNVAEDR 359
E A+ AL+G+ +D R IR++ + R
Sbjct: 282 EATGALEALNGEYVDNRPIRLDYSTPR 308
>gi|359475330|ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
vinifera]
Length = 162
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE+ FS+ G+++ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDQSLERAFSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D + L F + G EI E K +I +
Sbjct: 9 RCFVGGLAWATDDQSLERAFSQFG--EILESK------------------------IIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT S+ + A+E + ++DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFSSEQSMRDAIEGMNGQNLDGRNITVNEA 84
>gi|406867984|gb|EKD21021.1| hypothetical protein MBM_00134 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 544
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 102/212 (48%), Gaps = 36/212 (16%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFVGNL ++VD E L FE+ FG +S +VI +R
Sbjct: 298 LFVGNLSWNVDDEWLMREFEE--------------FGE------------ISGARVISDR 331
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER---------- 271
E+ RS+GFG+V ++ A A++ IDGR V+ + PR P +
Sbjct: 332 ESGRSKGFGYVEFTSSASAAAALKAKKGSLIDGREANVDFSTPRSDAPPKDRAQGRAAAF 391
Query: 272 APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
P +++GNL ++ D + + F EHG VVN R+ D+ETG +GFG+VT SS
Sbjct: 392 GDSTNPPSDTLFLGNLSFDADENTVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFSSI 451
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 363
+ A A+ G + GR +R++ A + RS
Sbjct: 452 DDAKTAFEAMTGAEIAGRPVRLDYATPKPDRS 483
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 30/117 (25%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
PP D LF+GNL +D D + F + GTV +
Sbjct: 397 PPSDT-LFLGNLSFDADENTVGEAFGEHGTV--------------------------VNV 429
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 272
++ ++ET +GFG+VT S++++A+ A E +I GR + ++ A P+ P+R+
Sbjct: 430 RLPTDQETGNPKGFGYVTFSSIDDAKTAFEAMTGAEIAGRPVRLDYATPK---PDRS 483
>gi|258575439|ref|XP_002541901.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902167|gb|EEP76568.1| predicted protein [Uncinocarpus reesii 1704]
Length = 503
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 37/212 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LFVGNL ++VD E L FE FG +S ++++
Sbjct: 265 ANLFVGNLSWNVDEEWLRSEFES--------------FGE------------LSGVRIVT 298
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR----GTQPERAPRV 275
+R++ RSRGFG+V + E+A KA E ++DGR L ++ A R G + R
Sbjct: 299 DRDSGRSRGFGYVEFTNAEDAAKAFEAKKGAELDGRPLNLDYANARQNAGGAKDRSQARA 358
Query: 276 FEPGFR-------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
G + +++GN+ + D +++ FS +G + R+ D E+GR +GFG++
Sbjct: 359 KSFGDQTSPESDTLFIGNISFGADENAIQETFSSYGTISGIRLPTDPESGRPKGFGYIQF 418
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
SS E A+ L G L GRA+R++ + RQ
Sbjct: 419 SSVDEARSALNELQGSELAGRAMRLDFSTPRQ 450
>gi|209976406|gb|ACJ04160.1| putative glycine-rich RNA-binding protein [Chorispora bungeana]
Length = 175
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 57/78 (73%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W D+ LE FS++G VV+++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 FRCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ+LDGR+I VN A+
Sbjct: 68 GMNGQDLDGRSITVNEAQ 85
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F + G V + ++I +
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGDVVDS--------------------------KIIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + + A+E + D+DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEA 84
>gi|34851124|gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 57/78 (73%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W DN LE+ FS G+++ ++++ DRETGRSRGFGFVT S+E + DAI
Sbjct: 8 FRCFVGGLAWATDNDALERAFSPFGEIIESKIINDRETGRSRGFGFVTFSNEKAMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 48/102 (47%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D++ L F G EI E K +I +
Sbjct: 9 RCFVGGLAWATDNDALERAFSPFG--EIIESK------------------------IIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT S + A+E + ++DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFSNEKAMRDAIEGMNGQNLDGRNITVNEA 84
>gi|361126769|gb|EHK98755.1| putative Nuclear localization sequence-binding protein [Glarea
lozoyensis 74030]
Length = 525
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 100/208 (48%), Gaps = 36/208 (17%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFVGNL +++D E L FE+ FG ++ V+ +R
Sbjct: 269 LFVGNLSWNIDDEWLYREFEE--------------FGE------------ITRANVLTDR 302
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR-----GTQPERAPRVF 276
E+ RS+GFG+V S+ A A+ IDGR V+ + PR G + + + F
Sbjct: 303 ESGRSKGFGYVEFSSSAAAAAALAAKKGALIDGREANVDFSTPRTNDAPGARADNRAKQF 362
Query: 277 -----EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
P ++VGNL +EVD + + F EHG VVN R+ D ++G +GFG+VT S
Sbjct: 363 GDSQNPPSDTLFVGNLSFEVDQDAVGEAFGEHGTVVNVRLPTDMDSGNPKGFGYVTFESI 422
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDR 359
E A A+ GQ + GR R++ A R
Sbjct: 423 DEAKTAYEAMKGQEIAGRPCRLDYATPR 450
>gi|449486948|ref|XP_004157450.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 173
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 60/84 (71%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
F +++VG L + D+ RL + F+++G+VV ARV+ DR+TGRSRGFGFVT + + +
Sbjct: 36 FMSSSKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDAS 95
Query: 336 DAIAALDGQNLDGRAIRVNVAEDR 359
AI ALDGQ+LDGR IR + A DR
Sbjct: 96 SAIQALDGQDLDGRRIRCSYATDR 119
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 29/121 (23%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
VF+ F+ +K+FVG L Y D ++L F K G E+ E +
Sbjct: 30 VFQTLRFMSS---SKVFVGGLSYGTDDQRLTEAFTKYG--EVVEAR-------------- 70
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRG 266
VI +R+T RSRGFGFVT E+A A++ D+DGR + + A R
Sbjct: 71 ----------VIMDRDTGRSRGFGFVTFGASEDASSAIQALDGQDLDGRRIRCSYATDRA 120
Query: 267 T 267
+
Sbjct: 121 S 121
>gi|449439323|ref|XP_004137435.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 171
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 60/84 (71%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
F +++VG L + D+ RL + F+++G+VV ARV+ DR+TGRSRGFGFVT + + +
Sbjct: 36 FMSSSKVFVGGLSYGTDDQRLTEAFTKYGEVVEARVIMDRDTGRSRGFGFVTFGASEDAS 95
Query: 336 DAIAALDGQNLDGRAIRVNVAEDR 359
AI ALDGQ+LDGR IR + A DR
Sbjct: 96 SAIQALDGQDLDGRRIRCSYATDR 119
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 29/121 (23%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
VF+ F+ +K+FVG L Y D ++L F K G E+ E +
Sbjct: 30 VFQTLRFMSS---SKVFVGGLSYGTDDQRLTEAFTKYG--EVVEAR-------------- 70
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRG 266
VI +R+T RSRGFGFVT E+A A++ D+DGR + + A R
Sbjct: 71 ----------VIMDRDTGRSRGFGFVTFGASEDASSAIQALDGQDLDGRRIRCSYATDRA 120
Query: 267 T 267
+
Sbjct: 121 S 121
>gi|356517068|ref|XP_003527212.1| PREDICTED: uncharacterized protein LOC100777821 [Glycine max]
Length = 182
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 58/78 (74%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W D+ LE+ FS+ G++V ++V+ DRETGRSRGFGFVT ++E + DAI
Sbjct: 8 FRCFVGGLAWATDHDALEKAFSQFGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D + L F + G EI E K VI +
Sbjct: 9 RCFVGGLAWATDHDALEKAFSQFG--EIVESK------------------------VIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT +T + A+E + ++DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFATEQAMRDAIEGMNGQNLDGRNITVNEA 84
>gi|15226983|ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|3608147|gb|AAC36180.1| putative chloroplast RNA binding protein precursor [Arabidopsis
thaliana]
gi|14596023|gb|AAK68739.1| putative chloroplast RNA binding protein precursor [Arabidopsis
thaliana]
gi|23198314|gb|AAN15684.1| putative chloroplast RNA binding protein precursor [Arabidopsis
thaliana]
gi|330254012|gb|AEC09106.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 308
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 99/198 (50%), Gaps = 34/198 (17%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFV NLP+ + ++ LF + GTV E I
Sbjct: 96 KLFVFNLPWSMSVNDISELFGQCGTVNNVE---------------------------IIR 128
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN------KAAPRGTQPERAPR 274
++ ++RGF FVTM++ EEA+ A++ F + + GR+++V+ K P+ +P
Sbjct: 129 QKDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFARRFKKPTPKSPNDLPSPA 188
Query: 275 VFEPGFRIYVGNLPWEVDNARLEQVFSEHG-KVVNARVVYDRETGRSRGFGFVTMSSETE 333
+ ++YV NL W+ + L ++F+ V+ARVV+ GRS G+GFV+ ++ E
Sbjct: 189 PGDTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSGYGFVSFATREE 248
Query: 334 LNDAIAALDGQNLDGRAI 351
+AI L+G+ + GR I
Sbjct: 249 AENAITKLNGKEIMGRPI 266
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++V NLPW + + ++F + G V N ++ ++ G++RGF FVTM+S E AI
Sbjct: 96 KLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQKD-GKNRGFAFVTMASGEEAQAAIDK 154
Query: 341 LDGQNLDGRAIRVNVA 356
D + GR I V+ A
Sbjct: 155 FDTFQVSGRIISVSFA 170
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 61/84 (72%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P ++++G + + D L + FS++G+VV+AR++ DRETGRSRGFGF+T +S E + A
Sbjct: 40 PSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSA 99
Query: 338 IAALDGQNLDGRAIRVNVAEDRQR 361
I ALDGQ+L GR IRVN A +R R
Sbjct: 100 IQALDGQDLHGRPIRVNYANERPR 123
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLF+G + Y D + L F K G V A ++I +
Sbjct: 43 KLFIGGVSYSTDEQSLREAFSKYGEVVDA--------------------------RIIMD 76
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGF+T ++VEEA A++ D+ GR + VN A R
Sbjct: 77 RETGRSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYANER 121
>gi|15223293|ref|NP_171616.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930401|gb|AAL31886.1|AF419554_1 At1g01080/T25K16_7 [Arabidopsis thaliana]
gi|21554268|gb|AAM63343.1| ribonucleoprotein, putative [Arabidopsis thaliana]
gi|22135777|gb|AAM91045.1| At1g01080/T25K16_7 [Arabidopsis thaliana]
gi|332189110|gb|AEE27231.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 293
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 102/223 (45%), Gaps = 37/223 (16%)
Query: 141 ESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQ 200
E ++ V + E V+ P +L+V N+P D +L +F+ GTV EV
Sbjct: 89 EPNKDSVVSKAEPVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVS-------- 140
Query: 201 GFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN 260
N +T SRG G+VTM ++ A+ A+ ++ GR + V
Sbjct: 141 ------------------RNPQTGESRGSGYVTMGSINSAKIAIASLDGTEVGGREMRVR 182
Query: 261 KAAPRGTQPERAPRV----------FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNAR 310
+ R P V +E ++YVGNLPW L FS+ G +V+ R
Sbjct: 183 YSVDMNPGTRRNPEVLNSTPKKILMYESQHKVYVGNLPWFTQPDGLRNHFSKFGTIVSTR 242
Query: 311 VVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 353
V++DR+TGR+R F F++ +S E DA + +G +GR I V
Sbjct: 243 VLHDRKTGRNRVFAFLSFTSGEE-RDAALSFNGTQYEGRRIIV 284
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 268 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
+P + PR E +YV N+P D A+L +F G V++ V + +TG SRG G+VT
Sbjct: 100 EPVKKPRPCE----LYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVT 155
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAED 358
M S AIA+LDG + GR +RV + D
Sbjct: 156 MGSINSAKIAIASLDGTEVGGREMRVRYSVD 186
>gi|169772913|ref|XP_001820925.1| glycine-rich RNA-binding protein 2 [Aspergillus oryzae RIB40]
gi|238490830|ref|XP_002376652.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
gi|83768786|dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697065|gb|EED53406.1| heterogeneous nuclear ribonucleoprotein G, putative [Aspergillus
flavus NRRL3357]
Length = 125
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 58/79 (73%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W ++ L Q FSE G V++A V+ DRETGRSRGFGFVT S++TE + AI
Sbjct: 5 KVYVGNLSWNTNDESLRQTFSEFGNVLDAIVMKDRETGRSRGFGFVTFSAQTEADAAIGG 64
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L+ Q LDGR IRVN+A R
Sbjct: 65 LNEQELDGRRIRVNLANAR 83
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
AK++VGNL ++ + E L F + G V A V+
Sbjct: 4 AKVYVGNLSWNTNDESLRQTFSEFGNVLDA--------------------------IVMK 37
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RSRGFGFVT S EA+ A+ + ++DGR + VN A R
Sbjct: 38 DRETGRSRGFGFVTFSAQTEADAAIGGLNEQELDGRRIRVNLANAR 83
>gi|320583460|gb|EFW97673.1| nuclear localization sequence binding protein [Ogataea
parapolymorpha DL-1]
Length = 500
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 107/216 (49%), Gaps = 37/216 (17%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
+P E A LFVG L + VD ++L F+ V A
Sbjct: 255 KPKEVATLFVGRLAWAVDDQRLLEEFQSLDGVLSA------------------------- 289
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP----- 269
+V+ RET RSRG+G+V + E+A+KA+E F +I+GR + ++ + + P
Sbjct: 290 -RVMTERETGRSRGYGYVDFESKEQAQKALEQFQGREIEGRPINLDMSTSKPQTPSQNQK 348
Query: 270 --ERAPRV----FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGF 323
+RA + +P ++VGNL ++ D L++ F +HG V+ R+ E+ + +GF
Sbjct: 349 FQDRAKKYGDTPSQPSDTLFVGNLSFQADRDTLKEFFEQHGTVLGIRIPTHPESEQPKGF 408
Query: 324 GFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
G+V S E A+ AL+G+ + GR +R++ + R
Sbjct: 409 GYVQFGSVDEAKAALEALNGEYIAGRPVRLDFSAPR 444
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 33/205 (16%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
L+VG L ++VD++ L FE+ GTV A V+ C +R
Sbjct: 396 LWVGQLSWNVDNDWLKSEFEQYGTVLDARVQ--------------C------------DR 429
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
++ RSRGFG+V +T EA +A + H ++DGR L V+ RG Q R
Sbjct: 430 DSGRSRGFGYVDFATSAEALRASKEAHGKELDGRALRVDLQPARGPQDRAESRAKHFKDE 489
Query: 278 ---PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
P +++G L W + + F+E G+V R+ + ++GR +GFG+V S+
Sbjct: 490 RSAPSNTLFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKEIDSGRPKGFGYVEFVSQDNA 549
Query: 335 NDAIAALDGQNLDGRAIRVNVAEDR 359
A+ ++GQ L GR IR++ A R
Sbjct: 550 AKALETMNGQALGGRPIRIDFAGKR 574
>gi|296089011|emb|CBI38714.3| unnamed protein product [Vitis vinifera]
Length = 166
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 87/158 (55%), Gaps = 12/158 (7%)
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN----------K 261
V ++V N ET SRG G+VTMS++ EA+ A+ D+ GR + V
Sbjct: 8 VQSIEVCRNAETGVSRGSGYVTMSSMREAKAAIAALDGSDVGGREMRVRFSTDMNFRRRN 67
Query: 262 AAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSR 321
+ + P R +FE +++YVGNL W + L FS+ G VV+ARVV+DR+ G+ R
Sbjct: 68 SEALNSAPMRNL-IFESPYKLYVGNLAWAIKPEDLRNHFSQFGTVVSARVVHDRKAGKHR 126
Query: 322 GFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
+GF++ SS E A+ +L+G+ GR++ V+ R
Sbjct: 127 AYGFLSFSSAAECEAAM-SLNGKEFRGRSLVVSAGMKR 163
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 299 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 358
+F HG V + V + ETG SRG G+VTMSS E AIAALDG ++ GR +RV + D
Sbjct: 1 MFKPHGTVQSIEVCRNAETGVSRGSGYVTMSSMREAKAAIAALDGSDVGGREMRVRFSTD 60
Query: 359 R--QRRSS 364
+RR+S
Sbjct: 61 MNFRRRNS 68
>gi|20152613|emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius]
Length = 168
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 58/78 (74%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE+ FS +G+V+ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 7 YRCFVGGLAWATDDQSLERAFSNYGQVLESKIINDRETGRSRGFGFVTFSSEQAMRDAIE 66
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ+LDGR I VN A+
Sbjct: 67 GMNGQDLDGRNITVNEAQ 84
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D + L F G ++ E K +I +
Sbjct: 8 RCFVGGLAWATDDQSLERAFSNYG--QVLESK------------------------IIND 41
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT S+ + A+E + D+DGR +TVN+A
Sbjct: 42 RETGRSRGFGFVTFSSEQAMRDAIEGMNGQDLDGRNITVNEA 83
>gi|365986018|ref|XP_003669841.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
gi|343768610|emb|CCD24598.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
Length = 426
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 31/207 (14%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E A +FVG L + +D E L FE G V A +V
Sbjct: 169 EPATIFVGRLSWSIDDEWLKKEFEHIGGVVGA--------------------------RV 202
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF- 276
IY R TDRSRG+G+V AEKA++ +IDGR + V+ + + + F
Sbjct: 203 IYERGTDRSRGYGYVDFEDKSYAEKAIQEMQGKEIDGRPINVDMSTSKPAGGNDRAKKFG 262
Query: 277 ----EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
EP +++GNL + D + + FS++G++++ R+ ET + +GFG+V S+
Sbjct: 263 DVPSEPSDTLFLGNLSFNADKDNIYETFSKYGEIISVRIPTHPETEQPKGFGYVQFSNIE 322
Query: 333 ELNDAIAALDGQNLDGRAIRVNVAEDR 359
+ A+ L G+ +D RA+R++ + R
Sbjct: 323 DAKKALEGLQGEYIDNRAVRLDYSTPR 349
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 27/114 (23%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P D LF+GNL ++ D + + F K G + + H
Sbjct: 268 PSDT-LFLGNLSFNADKDNIYETFSKYGEIISVRIPTH---------------------- 304
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 270
ET++ +GFG+V S +E+A+KA+E ID R + ++ + PR PE
Sbjct: 305 ----PETEQPKGFGYVQFSNIEDAKKALEGLQGEYIDNRAVRLDYSTPRPANPE 354
>gi|226499830|ref|NP_001140942.1| uncharacterized protein LOC100273020 [Zea mays]
gi|194701856|gb|ACF85012.1| unknown [Zea mays]
Length = 473
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 100/211 (47%), Gaps = 40/211 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFVGNL ++VD E L FE FG +S ++++ R
Sbjct: 227 LFVGNLSWNVDEEWLRREFES--------------FGE------------LSGVRIMTER 260
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR------- 274
ET RSRGFG+V + A+ A E ++DGR + ++ A PR + APR
Sbjct: 261 ETGRSRGFGYVEYADASSAKAAYEAKKDTELDGRTINLDYAKPRDANSQ-APREKAQTRA 319
Query: 275 ------VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
++VGNL + VD + +VF G++ R+ D ETGR +G+G+V
Sbjct: 320 RSFGDQTSPESNTLFVGNLVFGVDENAVREVFEGQGQIQGVRLPTDAETGRPKGYGYVEF 379
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
SS E A+ L G ++ GRAIR++ + R
Sbjct: 380 SSVDEARQALNELQGTDIGGRAIRLDFSTPR 410
>gi|356515764|ref|XP_003526568.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Glycine
max]
Length = 315
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 105/227 (46%), Gaps = 41/227 (18%)
Query: 140 EESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGN 199
E+ EE + EEEF +L N+P+ E + LFEK G V E+ +
Sbjct: 72 EQQTEEPLVSEEEF----SRTRLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMY----- 122
Query: 200 QGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV 259
+ +R+RG FV M + EEA +A+ Y+ +GR++ V
Sbjct: 123 ----------------------KKNRNRGLAFVEMGSPEEALEALNNLESYEFEGRVIKV 160
Query: 260 NKAAPRGTQ---PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS-EHGKVVNARVVYDR 315
N A P+ + P P+V F ++V NL +E + L++ F G+VV+A VVY
Sbjct: 161 NYARPKKEKTAPPPVKPKVV--TFNLFVANLSYEASSKDLKEFFDLGTGRVVSAEVVYRD 218
Query: 316 ETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
R G+GFV+ S+ E A+A G+ GR IRV DR RR
Sbjct: 219 NPRRPSGYGFVSFKSKKEAEAALAEFQGKVFMGRPIRV----DRGRR 261
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARV-VYDRETGRSRGFGFVTMSSETELNDAIA 339
R+ N+PW + +F +HGKV+ + +Y + R+RG FV M S E +A+
Sbjct: 89 RLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMYKK--NRNRGLAFVEMGSPEEALEALN 146
Query: 340 ALDGQNLDGRAIRVNVAEDRQRRSS 364
L+ +GR I+VN A ++ +++
Sbjct: 147 NLESYEFEGRVIKVNYARPKKEKTA 171
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 61/84 (72%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P ++++G + + D L + FS++G+VV+AR++ DRETGRSRGFGF+T +S E + A
Sbjct: 40 PSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSA 99
Query: 338 IAALDGQNLDGRAIRVNVAEDRQR 361
I ALDGQ+L GR IRVN A +R R
Sbjct: 100 IQALDGQDLHGRPIRVNYANERPR 123
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLF+G + Y D + L F K G V A ++I +
Sbjct: 43 KLFIGGVSYSTDEQSLREAFSKYGEVVDA--------------------------RIIMD 76
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGF+T ++VEEA A++ D+ GR + VN A R
Sbjct: 77 RETGRSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYANER 121
>gi|302850790|ref|XP_002956921.1| hypothetical protein VOLCADRAFT_107445 [Volvox carteri f.
nagariensis]
gi|300257802|gb|EFJ42046.1| hypothetical protein VOLCADRAFT_107445 [Volvox carteri f.
nagariensis]
Length = 444
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 93/204 (45%), Gaps = 30/204 (14%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+ AK+F+G L ++ EKL FE G+V A V
Sbjct: 5 QSAKVFIGGLSWETTGEKLRAYFENFGSVREAFVS------------------------- 39
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
YNR R RGFGFV + E A+K V H ID R + KA P+ PE +
Sbjct: 40 -YNRNNGRPRGFGFVVFESPEVADKVVATKH--TIDRREVEAKKAVPKEETPEEKQQGSA 96
Query: 278 P--GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
P +I+VG L VD A+L Q FS+ G V +A V+YD E R RGFGFVT + E ++
Sbjct: 97 PQRTKKIFVGGLAPSVDEAQLRQHFSQFGTVEDAVVMYDHENKRPRGFGFVTFAEEDAVD 156
Query: 336 DAIAALDGQNLDGRAIRVNVAEDR 359
+ Q + + I V A R
Sbjct: 157 RVFSHGAVQTIADKPIEVKAAVPR 180
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 26/126 (20%)
Query: 144 EEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFH 203
EE E+++ P K+FVG L VD +L F + GTVE A
Sbjct: 85 EETPEEKQQGSAPQRTKKIFVGGLAPSVDEAQLRQHFSQFGTVEDAV------------- 131
Query: 204 MWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA 263
V+Y+ E R RGFGFVT + + ++ I + + V A
Sbjct: 132 -------------VMYDHENKRPRGFGFVTFAEEDAVDRVFSHGAVQTIADKPIEVKAAV 178
Query: 264 PRGTQP 269
PR P
Sbjct: 179 PRDQMP 184
>gi|255645618|gb|ACU23303.1| unknown [Glycine max]
Length = 315
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 105/227 (46%), Gaps = 41/227 (18%)
Query: 140 EESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGN 199
E+ EE + EEEF +L N+P+ E + LFEK G V E+ +
Sbjct: 72 EQQTEEPLVSEEEF----SRTRLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMY----- 122
Query: 200 QGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV 259
+ +R+RG FV M + EEA +A+ Y+ +GR++ V
Sbjct: 123 ----------------------KKNRNRGLAFVEMGSPEEALEALNNLESYEFEGRVIKV 160
Query: 260 NKAAPRGTQ---PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFS-EHGKVVNARVVYDR 315
N A P+ + P P+V F ++V NL +E + L++ F G+VV+A VVY
Sbjct: 161 NYARPKKEKTAPPPVKPKVV--TFNLFVANLSYEASSKDLKEFFDLGTGRVVSAEVVYRD 218
Query: 316 ETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
R G+GFV+ S+ E A+A G+ GR IRV DR RR
Sbjct: 219 NPRRPSGYGFVSFKSKKEAEAALAEFQGKVFMGRPIRV----DRGRR 261
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARV-VYDRETGRSRGFGFVTMSSETELNDAIA 339
R+ N+PW + +F +HGKV+ + +Y + R+RG FV M S E +A+
Sbjct: 89 RLLAQNVPWTSTPEDIRTLFEKHGKVLEVELSMYKK--NRNRGLAFVEMGSPEEALEALN 146
Query: 340 ALDGQNLDGRAIRVNVAEDRQRRSS 364
L+ +GR I+VN A ++ +++
Sbjct: 147 NLESYEFEGRVIKVNYARPKKEKTA 171
>gi|328767903|gb|EGF77951.1| hypothetical protein BATDEDRAFT_27077 [Batrachochytrium
dendrobatidis JAM81]
Length = 106
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 61/82 (74%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
PG +++VGNL W DN L FS+ G+VV++ V+ DRETGRSRGFGFVT SS + A
Sbjct: 9 PGTKVFVGNLSWGTDNNSLADAFSQFGEVVDSIVLKDRETGRSRGFGFVTFSSPESASAA 68
Query: 338 IAALDGQNLDGRAIRVNVAEDR 359
+ A++GQ+L+GR IRVN+A +R
Sbjct: 69 VDAMNGQDLNGRNIRVNLANER 90
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 26/111 (23%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
E K+FVGNL + D+ LA F + G V V ++
Sbjct: 6 EAAPGTKVFVGNLSWGTDNNSLADAFSQFGEV-------------------VDSI----- 41
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
V+ +RET RSRGFGFVT S+ E A AV+ + D++GR + VN A R
Sbjct: 42 --VLKDRETGRSRGFGFVTFSSPESASAAVDAMNGQDLNGRNIRVNLANER 90
>gi|390432205|gb|AFL91694.1| glycine-rich RNA binding protein [Raphanus sativus var.
raphanistroides]
Length = 153
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 58/78 (74%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE FS++G V++++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFSQYGDVLDSKIINDRETGRSRGFGFVTFKDEKSMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
A++GQ+LDGR+I VN A+
Sbjct: 68 AMNGQDLDGRSITVNEAQ 85
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F + G V + ++I +
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGDVLDS--------------------------KIIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + A+E + D+DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFKDEKSMRDAIEAMNGQDLDGRSITVNEA 84
>gi|223973531|gb|ACN30953.1| unknown [Zea mays]
Length = 184
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 60/84 (71%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G L W VD+ +L + FS G+V ARV+ DRETGRSRGFGFV S +AI+A
Sbjct: 38 KLFIGGLDWGVDDVKLREAFSSFGEVTEARVITDRETGRSRGFGFVNYSDSDAAKEAISA 97
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSS 364
+DG+ +DGR +RVN+A +R RS+
Sbjct: 98 MDGKEIDGRQVRVNMANERPLRST 121
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLF+G L + VD KL F G E+ E + VI +
Sbjct: 38 KLFIGGLDWGVDDVKLREAFSSFG--EVTEAR------------------------VITD 71
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGFV S + A++A+ +IDGR + VN A R
Sbjct: 72 RETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANER 116
>gi|211906474|gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
Length = 168
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 57/81 (70%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W D+ LE+ FS G++V ++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 FRCFVGGLAWATDDRALEEAFSAFGEIVESKIINDRETGRSRGFGFVTFRDEKAMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
++GQNLDGR I VN A+ R+
Sbjct: 68 GMNGQNLDGRNITVNEAQSRR 88
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F G EI E K +I +
Sbjct: 9 RCFVGGLAWATDDRALEEAFSAFG--EIVESK------------------------IIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGFVT + A+E + ++DGR +TVN+A R
Sbjct: 43 RETGRSRGFGFVTFRDEKAMRDAIEGMNGQNLDGRNITVNEAQSR 87
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG + ++ D+ L + F ++G+V+ ARV+ DRETGRSRGF FVT +S E + AI A
Sbjct: 41 KVFVGGISYQTDDTSLREAFGKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSAIQA 100
Query: 341 LDGQNLDGRAIRVNVAEDRQRRS 363
LDGQ+L GR +RVN A DR R S
Sbjct: 101 LDGQDLHGRRVRVNYANDRPRTS 123
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+K+FVG + Y D L F K G E+ E + VI
Sbjct: 40 SKVFVGGISYQTDDTSLREAFGKYG--EVIEAR------------------------VII 73
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RSRGF FVT ++ EEA A++ D+ GR + VN A R
Sbjct: 74 DRETGRSRGFAFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDR 119
>gi|356508060|ref|XP_003522779.1| PREDICTED: 30 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 297
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 101/219 (46%), Gaps = 40/219 (18%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
V EEEF +L N+P+ E + LFEK G V E+ +
Sbjct: 62 VVAEEEF----SRTRLLAQNVPWTSTPEDIRSLFEKHGKVLQVELSMY------------ 105
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRG 266
+ +R+RG FV M + EEA +A+ Y+ +GR++ VN A P+
Sbjct: 106 ---------------KKNRNRGLAFVEMGSPEEALEALNNLESYEFEGRVIKVNYARPKK 150
Query: 267 --TQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF-SEHGKVVNARVVYDRETGRSRGF 323
T P P+V F ++V NL +E L++ F S GKVV+A VVY R G+
Sbjct: 151 EKTPPPVKPKVVT--FNLFVANLSYEASAKDLKEFFDSGTGKVVSAEVVYRDNPRRPSGY 208
Query: 324 GFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
GFV+ S+ E A+A G+ GR IRV DR RR
Sbjct: 209 GFVSYKSKKEAEAALAEFQGKIFMGRPIRV----DRGRR 243
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARV-VYDRETGRSRGFGFVTMSSETELNDAIA 339
R+ N+PW + +F +HGKV+ + +Y + R+RG FV M S E +A+
Sbjct: 72 RLLAQNVPWTSTPEDIRSLFEKHGKVLQVELSMYKK--NRNRGLAFVEMGSPEEALEALN 129
Query: 340 ALDGQNLDGRAIRVNVAEDRQRRS 363
L+ +GR I+VN A ++ ++
Sbjct: 130 NLESYEFEGRVIKVNYARPKKEKT 153
>gi|225560173|gb|EEH08455.1| ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 470
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 111/229 (48%), Gaps = 43/229 (18%)
Query: 149 EEEEFVEPP-------EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQG 201
EEEE P E LF+GNL ++VD E L FE+ G E+A V+
Sbjct: 211 EEEEVTAPKKTKVDSNEGGNLFIGNLSWNVDEEWLRSEFEEFG--ELAGVR--------- 259
Query: 202 FHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN- 260
++ +R++ RSRGFG+V + +A KA ++DGR L V+
Sbjct: 260 ---------------IVTDRDSGRSRGFGYVEFTNAADAAKAHAAKKDAELDGRKLNVDF 304
Query: 261 -----KAAPRGTQPERAPRVFEP----GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARV 311
AAP+ RA + +++GN+ + + + + F+EHG ++ R+
Sbjct: 305 ANGRSNAAPKERAQSRAQNFGDQTSPESDTLFIGNIAFSANENMISEAFAEHGSILGVRL 364
Query: 312 VYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
D E+GR +GFG+V SS E A AL+G +L GR++R++ + RQ
Sbjct: 365 PTDPESGRPKGFGYVQFSSVDEARSAFQALNGADLGGRSMRLDFSSPRQ 413
>gi|448123237|ref|XP_004204643.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|448125519|ref|XP_004205201.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358249834|emb|CCE72900.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358350182|emb|CCE73461.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
Length = 505
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 108/211 (51%), Gaps = 34/211 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E A LFVG L +++D E L FE G V A +V
Sbjct: 289 EPATLFVGRLSWNIDDEWLQREFEPLGGVTGA--------------------------RV 322
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRL--LTVNKAAPRGTQP--ERAP 273
IY + + +SRG+G+V T +A+ A++ + +IDGR L ++++ PR + P +RA
Sbjct: 323 IYEKASGKSRGYGYVDFETKSQAQHALKEYQGREIDGRPINLDMSESKPRPSNPRFDRAK 382
Query: 274 RVFE----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
+ + P +++GNL + L +F E+G+VV+ R+ +T + +GFG++ S
Sbjct: 383 QFGDVPSAPSSTLFIGNLSFNAQRDNLYDIFGEYGRVVSCRMPTHPDTQQPKGFGYIEFS 442
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
+ E A+ AL+G+ ++GR R++ + R+
Sbjct: 443 TVDEAKAALEALNGEYVEGRPCRLDFSTPRE 473
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 54/83 (65%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++VG L W +D+ L++ F G V ARV+Y++ +G+SRG+G+V ++++ A+
Sbjct: 293 LFVGRLSWNIDDEWLQREFEPLGGVTGARVIYEKASGKSRGYGYVDFETKSQAQHALKEY 352
Query: 342 DGQNLDGRAIRVNVAEDRQRRSS 364
G+ +DGR I ++++E + R S+
Sbjct: 353 QGREIDGRPINLDMSESKPRPSN 375
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 26/113 (23%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LF+GNL ++ + L +F + G V + H
Sbjct: 395 LFIGNLSFNAQRDNLYDIFGEYGRVVSCRMPTH--------------------------P 428
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
+T + +GFG++ STV+EA+ A+E + ++GR ++ + PR +PR
Sbjct: 429 DTQQPKGFGYIEFSTVDEAKAALEALNGEYVEGRPCRLDFSTPRENSNRPSPR 481
>gi|406956570|gb|EKD84644.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 81
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 64/81 (79%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++VG+LPW VD+A+L ++F++ G VV+A+VV DRETGRSRGFGFV MS++ E +A+ L
Sbjct: 1 MFVGSLPWAVDDAKLGEIFAQAGNVVSAQVVKDRETGRSRGFGFVEMSTDEEAQNAVKNL 60
Query: 342 DGQNLDGRAIRVNVAEDRQRR 362
+G +++GR I VN+A R+ R
Sbjct: 61 NGADVEGRKIVVNIARPREDR 81
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 56/104 (53%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FVG+LP+ VD KL +F +AG V A QV+ +R
Sbjct: 1 MFVGSLPWAVDDAKLGEIFAQAGNVVSA--------------------------QVVKDR 34
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET RSRGFGFV MST EEA+ AV+ + D++GR + VN A PR
Sbjct: 35 ETGRSRGFGFVEMSTDEEAQNAVKNLNGADVEGRKIVVNIARPR 78
>gi|406959178|gb|EKD86596.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 81
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 64/81 (79%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++VG+LPW VD+A+L ++F++ G VV+A+VV DRETGRSRGFGFV MS++ E +A+ L
Sbjct: 1 MFVGSLPWAVDDAKLAELFAQAGNVVSAQVVKDRETGRSRGFGFVEMSTDEEAQNAVKNL 60
Query: 342 DGQNLDGRAIRVNVAEDRQRR 362
+G +++GR I VN+A R+ R
Sbjct: 61 NGTDVEGRKIVVNIARPREDR 81
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 57/104 (54%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FVG+LP+ VD KLA LF +AG V A QV+ +R
Sbjct: 1 MFVGSLPWAVDDAKLAELFAQAGNVVSA--------------------------QVVKDR 34
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET RSRGFGFV MST EEA+ AV+ + D++GR + VN A PR
Sbjct: 35 ETGRSRGFGFVEMSTDEEAQNAVKNLNGTDVEGRKIVVNIARPR 78
>gi|242067831|ref|XP_002449192.1| hypothetical protein SORBIDRAFT_05g006270 [Sorghum bicolor]
gi|241935035|gb|EES08180.1| hypothetical protein SORBIDRAFT_05g006270 [Sorghum bicolor]
Length = 499
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/88 (56%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Query: 275 VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS--ET 332
+F P FRIYVGNL VDN RL Q FS++GKV ARV+ +T RSRGFGFVT+++ +
Sbjct: 407 LFGPYFRIYVGNLSRNVDNYRLGQFFSKYGKVAEARVMCHIKTKRSRGFGFVTLATVVDH 466
Query: 333 ELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
E AIA LDGQ LD R +RV +AE +Q
Sbjct: 467 EQEHAIAKLDGQILDRRPVRVKLAEQKQ 494
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 33/99 (33%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+++VGNL +VD+ +L F K G V A V H
Sbjct: 413 RIYVGNLSRNVDNYRLGQFFSKYGKVAEARVMCHI------------------------- 447
Query: 221 RETDRSRGFGFVTMSTV--EEAEKAVEMFHRYDIDGRLL 257
+T RSRGFGFVT++TV E E A+ +DG++L
Sbjct: 448 -KTKRSRGFGFVTLATVVDHEQEHAIA-----KLDGQIL 480
>gi|156841314|ref|XP_001644031.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156114664|gb|EDO16173.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 437
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 105/207 (50%), Gaps = 35/207 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E A +FVG L + VD E L FE G V A +V
Sbjct: 176 ETATIFVGRLSWSVDDEWLKNEFEHIGDVIGA--------------------------RV 209
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAV-EMFHRYDIDGRLLTVNKAAPR---GTQPERAP 273
IY R TDRSRG+G+V S+ AE+AV EM H IDGR + + + + G +RA
Sbjct: 210 IYERGTDRSRGYGYVDFSSKSAAERAVKEM-HGKQIDGREINCDMSTSKPAGGNGGDRAK 268
Query: 274 RV----FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
+ +P +++GNL + D ++ ++FS+HG++++ R+ ET + +GFG+V
Sbjct: 269 KFGDVPSQPSDTLFLGNLSFNADRDQIYELFSKHGEIISVRLPTHPETEQPKGFGYVQYG 328
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVA 356
+ + A+ AL G+ +D R +R++ +
Sbjct: 329 NVNDAQSALDALQGEYIDNRPVRLDFS 355
>gi|15229525|ref|NP_189025.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|30687226|ref|NP_850629.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|9294652|dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana]
gi|17979516|gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|20453303|gb|AAM19890.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gi|332643298|gb|AEE76819.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
gi|332643299|gb|AEE76820.1| glycine-rich RNA-binding protein 4 [Arabidopsis thaliana]
Length = 136
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W D++ L+Q F+ G+V A V+ DRETGRSRGFGFV+ S E N+AI
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 341 LDGQNLDGRAIRVNVAEDRQR--RSSF 365
+DG+ L+GR IRVN+A +R RSSF
Sbjct: 96 MDGKELNGRQIRVNLATERSSAPRSSF 122
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 47/110 (42%), Gaps = 26/110 (23%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLFVG L + D L F G V A VI
Sbjct: 35 SKLFVGGLSWGTDDSSLKQAFTSFGEVTEA--------------------------TVIA 68
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
+RET RSRGFGFV+ S + A A++ +++GR + VN A R + P
Sbjct: 69 DRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAP 118
>gi|449540824|gb|EMD31812.1| hypothetical protein CERSUDRAFT_88684 [Ceriporiopsis subvermispora
B]
Length = 292
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 34/205 (16%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FVG L ++VD++ LA F + G V A V+ +R
Sbjct: 46 IFVGKLSWNVDNDWLAQEFAECGEVVSARVQM--------------------------DR 79
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV------ 275
T +SRGFG+VT +TVE + A+ + +IDGR + ++K+ + R R
Sbjct: 80 NTGKSRGFGYVTFATVEAVDAAIAQNGK-EIDGRAVNIDKSIEKDKGAVRQKRAEAYGDK 138
Query: 276 -FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
EP ++VGNL W+ L + F+E+G + + RV DRETG+ +GF +V S
Sbjct: 139 ASEPSSVLFVGNLSWDATEDTLWETFNEYGDIKSVRVPTDRETGKPKGFAYVEFSDIEAS 198
Query: 335 NDAIAALDGQNLDGRAIRVNVAEDR 359
A G + GR IRV+ ++ R
Sbjct: 199 KKAFEGAAGAEVAGRNIRVDFSQPR 223
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 61/84 (72%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P ++++G + + D L + FS++G+VV+AR++ DRETGRSRGFGF+T +S E + A
Sbjct: 40 PSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEASSA 99
Query: 338 IAALDGQNLDGRAIRVNVAEDRQR 361
I ALDGQ+L GR IRVN A +R R
Sbjct: 100 IQALDGQDLHGRPIRVNYANERPR 123
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 26/118 (22%)
Query: 148 FEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVC 207
F+ + KLF+G + Y D + L F K G V A
Sbjct: 30 FQAIRCMSSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDA------------------ 71
Query: 208 AVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
++I +RET RSRGFGF+T ++VEEA A++ D+ GR + VN A R
Sbjct: 72 --------RIIMDRETGRSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYANER 121
>gi|307105138|gb|EFN53389.1| hypothetical protein CHLNCDRAFT_36600 [Chlorella variabilis]
Length = 321
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 97/203 (47%), Gaps = 36/203 (17%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P AKLF+G L +D EKL F K G++ V AV
Sbjct: 6 PTSAKLFLGGLSWDTTEEKLRDHFSKYGSI-------------------VEAV------- 39
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
V+ +R+T R RGFGFVT + A+ VE H IDGR + K+ P+ +P+
Sbjct: 40 VMRDRQTGRPRGFGFVTFTEPAAADAVVEDVHV--IDGRQIDAKKSVPQEMKPKAR---- 93
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
+++VG L + + + FS+ G+VV A+++ D +GRSRGFGFVT + +
Sbjct: 94 ----KVFVGGLSPDTTEDQFREYFSQFGEVVEAQIMQDHMSGRSRGFGFVTFAEDASAES 149
Query: 337 AIAALDGQNLDGRAIRVNVAEDR 359
AA +L G+ + V A +
Sbjct: 150 VFAAGTMHDLGGKKVEVKPATPK 172
>gi|170091988|ref|XP_001877216.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648709|gb|EDR12952.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 218
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 103/205 (50%), Gaps = 35/205 (17%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FVG L + VD+++LA F G +E A V+ +R
Sbjct: 1 VFVGQLSWAVDNDRLAQEFADCGEIESATVQM--------------------------DR 34
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR------- 274
T +SRGFG+V +T + EKA++M + +IDGR + V+++ PR R R
Sbjct: 35 NTGKSRGFGYVHFTTPDAVEKALQM-NGQEIDGRAIKVDRSLPRDKSQVREKRAQAFGDE 93
Query: 275 VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
V P ++VGNL + V + F+++G V + R+ DRETGR +GFG+V
Sbjct: 94 VSAPSSTLFVGNLSFGVTEDTVWSFFNDYG-VKSVRLPTDRETGRPKGFGYVEFEDIDGA 152
Query: 335 NDAIAALDGQNLDGRAIRVNVAEDR 359
A A +G ++GR+IR++ ++ R
Sbjct: 153 KKAFEAANGSEIEGRSIRLDYSQPR 177
>gi|6273331|gb|AAF06329.1|AF191305_1 glycine-rich RNA binding protein, partial [Medicago sativa]
Length = 105
Score = 94.4 bits (233), Expect = 7e-17, Method: Composition-based stats.
Identities = 42/77 (54%), Positives = 60/77 (77%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R +VG L W DN LE+ FS++G++V+++++ DRETGRSRGFGFVT ++E +ND I A
Sbjct: 7 RCFVGGLAWATDNDALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDVIEA 66
Query: 341 LDGQNLDGRAIRVNVAE 357
++GQ+LDGR I VN A+
Sbjct: 67 MNGQDLDGRNITVNQAQ 83
Score = 48.1 bits (113), Expect = 0.007, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D++ L F + G EI + K +I +
Sbjct: 7 RCFVGGLAWATDNDALEKAFSQYG--EIVDSK------------------------IIND 40
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + + +E + D+DGR +TVN+A
Sbjct: 41 RETGRSRGFGFVTFANEKSMNDVIEAMNGQDLDGRNITVNQA 82
>gi|2331133|gb|AAB66885.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 161
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 58/81 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W DN LE FS +G+++ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
++G+ LDGR I VN A+ R+
Sbjct: 68 GMNGKELDGRNITVNEAQSRR 88
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 51/110 (46%), Gaps = 26/110 (23%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P D + FVG L + D+ L F G EI E K
Sbjct: 4 PDVDYRCFVGGLAWATDNRSLEAAFSTYG--EILESK----------------------- 38
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+I +RET RSRGFGFVT S+ + A+E + ++DGR +TVN+A R
Sbjct: 39 -IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|367015628|ref|XP_003682313.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
gi|359749975|emb|CCE93102.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
Length = 436
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 33/209 (15%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E A +FVG L + +D E L F+ G V A +V
Sbjct: 185 EPATIFVGRLSWSIDDEWLKNEFDHIGGVVSA--------------------------RV 218
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN--KAAPRGTQPERAPRV 275
IY R TDRSRG+G+V AEKAV+ H +IDGR + + + P G + +
Sbjct: 219 IYERGTDRSRGYGYVDFEDKSYAEKAVKEMHGKEIDGRPINCDLSTSKPAGNPRDDRAKK 278
Query: 276 F-----EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
F EP +++GNL + D + ++FS+ G++V+ R+ ET + +GFG+V +
Sbjct: 279 FGDLPSEPSETLFLGNLSFNADRDNIYEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYGN 338
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDR 359
+ A+ AL G+ +D R +R++ + R
Sbjct: 339 VDDAKKALDALQGEYIDNRPVRLDYSTPR 367
>gi|83773473|dbj|BAE63600.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 440
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 40/214 (18%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LFVGNL ++VD L FE+ G + S ++++
Sbjct: 195 ANLFVGNLSWNVDEAWLQSEFEEFGEL--------------------------SGVRIMT 228
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR-------GTQPERA 272
R+T RSRGFG+V + +A KA E +IDGR + ++ A R G Q
Sbjct: 229 ERDTGRSRGFGYVEYTNAVDAAKAFEAKRDTEIDGRKINLDYATGRPANREQGGFQDRAQ 288
Query: 273 PRVFEPGFR-------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 325
R G + ++VGN+P+ + L +VF + G ++ R+ D E+GR +GFG+
Sbjct: 289 ARARSFGDQASPESDTLFVGNIPFSANEDSLHEVFGQKGSILGIRLPTDPESGRPKGFGY 348
Query: 326 VTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
V SS E +A L+G +DGR +R++ + R
Sbjct: 349 VQFSSVEEAREAFNELNGAEIDGRPVRLDFSTPR 382
>gi|21553972|gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W D++ L+Q F+ G+V A V+ DRETGRSRGFGFV+ S E N+AI
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 341 LDGQNLDGRAIRVNVAEDRQR--RSSF 365
+DG+ L+GR IRVN+A +R RSSF
Sbjct: 96 MDGKELNGRQIRVNLATERSSAPRSSF 122
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 47/110 (42%), Gaps = 26/110 (23%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLFVG L + D L F G V A VI
Sbjct: 35 SKLFVGGLSWGTDDSSLKQAFTSFGEVTEA--------------------------TVIA 68
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
+RET RSRGFGFV+ S + A A++ +++GR + VN A R + P
Sbjct: 69 DRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAP 118
>gi|409049565|gb|EKM59042.1| hypothetical protein PHACADRAFT_169505 [Phanerochaete carnosa
HHB-10118-sp]
Length = 578
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 105/205 (51%), Gaps = 34/205 (16%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FVG L ++VD++ L F + G V A V+ +R
Sbjct: 311 IFVGKLSWNVDNDWLESEFAECGEVVSARVQM--------------------------DR 344
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP--ERAPRVF--- 276
T +SRGFGFVT ++ E +KA+E+ + +IDGR + ++K+ + ER + F
Sbjct: 345 NTGKSRGFGFVTFASPEAVDKALELNGK-EIDGRPINIDKSVEKDQNQVRERRAKAFGDA 403
Query: 277 --EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
P ++VGNL ++ +L +VFS++G V + R+ DRE+GR +GFG+V
Sbjct: 404 TSAPSSVLFVGNLSFDATEDQLWEVFSDYGSVKSVRMPTDRESGRPKGFGYVEFEDVESA 463
Query: 335 NDAIAALDGQNLDGRAIRVNVAEDR 359
A L GQ + GRA+R++ ++ R
Sbjct: 464 KKAHEGLAGQEIAGRAVRLDFSQPR 488
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 60/88 (68%), Gaps = 7/88 (7%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
I+VG L W VDN LE F+E G+VV+ARV DR TG+SRGFGFVT +S ++ A+ L
Sbjct: 311 IFVGKLSWNVDNDWLESEFAECGEVVSARVQMDRNTGKSRGFGFVTFASPEAVDKAL-EL 369
Query: 342 DGQNLDGRAIRVN--VAED----RQRRS 363
+G+ +DGR I ++ V +D R+RR+
Sbjct: 370 NGKEIDGRPINIDKSVEKDQNQVRERRA 397
>gi|169861389|ref|XP_001837329.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
gi|116502051|gb|EAU84946.1| single-stranded DNA binding protein [Coprinopsis cinerea
okayama7#130]
Length = 569
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 35/205 (17%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FVG L ++VD++ LA F G +E A V+ +R
Sbjct: 329 VFVGQLSWNVDNDWLASEFASCGEIESATVQM--------------------------DR 362
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV------ 275
T +SRGFG+V +TVE A+KA+E+ + +ID R + V+ + PR R R
Sbjct: 363 NTGKSRGFGYVHFTTVEAAQKALELNGK-EIDNRPIKVDISTPRNPDAARQKRAQTFGDV 421
Query: 276 -FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
P ++VGNL + + +F+++G V + R+ DRE+GR +GFG+V
Sbjct: 422 TSPPSNTLFVGNLSFNTSEDSVWSLFNDYG-VKSVRLPTDRESGRPKGFGYVEFEDVEGA 480
Query: 335 NDAIAALDGQNLDGRAIRVNVAEDR 359
A A +G +LDGR IR++ ++ R
Sbjct: 481 KKAFEANNGADLDGRPIRLDYSQPR 505
>gi|401842356|gb|EJT44580.1| NSR1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 393
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
E E A +FVG L + +D E L FE G V A
Sbjct: 136 ESGEPATIFVGRLSWSIDDEWLKKEFEHIGGVISA------------------------- 170
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN--KAAPRGTQPERA 272
+VI R TDRSRG+G+V AEKA++ +IDGR + + + P G
Sbjct: 171 -RVINERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDLSTSKPAGNNTNDR 229
Query: 273 PRVF-----EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
+ F EP +++GNL + D + ++F++HG+VV+ R+ ET + +GFG+V
Sbjct: 230 AKKFGDTPSEPSDTLFLGNLSFNADRDTIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQ 289
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
SS + A+ +L G+ +D R +R++ + R
Sbjct: 290 FSSLEDSKKALESLQGEYIDNRPVRLDYSSPR 321
>gi|154288132|ref|XP_001544861.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408502|gb|EDN04043.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 500
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 113/230 (49%), Gaps = 44/230 (19%)
Query: 149 EEEEFVEPPEDAK--------LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQ 200
+EEE V P+ K LF+GNL ++VD E L FE+ G E+A V+
Sbjct: 240 DEEEEVSAPKKTKVDSNEGGNLFIGNLSWNVDEEWLRSEFEEFG--ELAGVR-------- 289
Query: 201 GFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN 260
++ +R++ RSRGFG+V + +A KA ++DGR L V+
Sbjct: 290 ----------------IVTDRDSGRSRGFGYVEFTNAADAAKAHAAKKDAELDGRKLNVD 333
Query: 261 ------KAAPRGTQPERAP----RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNAR 310
AAP+ RA + +++GN+ + + + + F+EHG ++ R
Sbjct: 334 FANGRSNAAPKERAQSRAQNFGDQTSPESDTLFIGNIAFSANENMISEAFAEHGSILGVR 393
Query: 311 VVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
+ D E+GR +GFG+V SS E A AL+G +L GR++R++ + RQ
Sbjct: 394 LPTDPESGRPKGFGYVQFSSVDEARSAFQALNGADLGGRSMRLDFSSPRQ 443
>gi|365760560|gb|EHN02272.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 371
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
E E A +FVG L + +D E L FE G V A
Sbjct: 136 ESGEPATIFVGRLSWSIDDEWLKKEFEHIGGVISA------------------------- 170
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN--KAAPRGTQPERA 272
+VI R TDRSRG+G+V AEKA++ +IDGR + + + P G
Sbjct: 171 -RVINERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDLSTSKPAGNNTNDR 229
Query: 273 PRVF-----EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
+ F EP +++GNL + D + ++F++HG+VV+ R+ ET + +GFG+V
Sbjct: 230 AKKFGDTPSEPSDTLFLGNLSFNADRDTIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQ 289
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
SS + A+ +L G+ +D R +R++ + R
Sbjct: 290 FSSLEDSKKALESLQGEYIDNRPVRLDYSSPR 321
>gi|242055377|ref|XP_002456834.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
gi|241928809|gb|EES01954.1| hypothetical protein SORBIDRAFT_03g043760 [Sorghum bicolor]
Length = 147
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Query: 257 LTVNKAAPRGTQPERAPRVFEPG----FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVV 312
L + A G +P VF +++VG L W VD+ +L + FS G V ARV+
Sbjct: 10 LLRHSALASGVAASSSPAVFNAARLMSTKLFVGGLSWGVDDMKLREAFSGFGDVTEARVI 69
Query: 313 YDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
DR+TG+SRGFGFV +S N AI+ +DG+ +DGR +RVN+A DR
Sbjct: 70 TDRDTGKSRGFGFVNYTSSDAANAAISGMDGKEIDGRPVRVNIANDR 116
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG L + VD KL F G V A +VI +
Sbjct: 38 KLFVGGLSWGVDDMKLREAFSGFGDVTEA--------------------------RVITD 71
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
R+T +SRGFGFV ++ + A A+ +IDGR + VN A R
Sbjct: 72 RDTGKSRGFGFVNYTSSDAANAAISGMDGKEIDGRPVRVNIANDR 116
>gi|242822492|ref|XP_002487897.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
gi|218712818|gb|EED12243.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
Length = 479
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 101/211 (47%), Gaps = 40/211 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFVGNL ++VD E L FE+ FG +S ++++ R
Sbjct: 233 LFVGNLSWNVDEEWLRREFEE--------------FGE------------LSGVRIMTER 266
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR------- 274
E+ RSRGFG+V + A+ A E +IDGR + ++ A PR +APR
Sbjct: 267 ESGRSRGFGYVEYADASSAKAAYEAKKDAEIDGRTINLDYAKPRDAN-NQAPREKAQNRA 325
Query: 275 ------VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
++VGNL + VD + +VF G++ R+ D ETGR +G+G+V
Sbjct: 326 RSFGDQTSPESNTLFVGNLVFGVDENAVREVFEGQGQIQGIRLPTDAETGRPKGYGYVEF 385
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
SS E A+ L G ++ GRAIR++ + R
Sbjct: 386 SSVDEARQALNDLQGTDIGGRAIRLDFSTPR 416
>gi|1346180|sp|P49310.1|GRP1_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP1A
gi|496233|gb|AAA59212.1| homology with RNA-binding proteins in meristematic tissue [Sinapis
alba]
Length = 166
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 58/78 (74%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE FS++G+V++++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ+LDGR+I VN A+
Sbjct: 68 GMNGQDLDGRSITVNEAQ 85
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 26/107 (24%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P + + FVG L + D L F + G E+ + K
Sbjct: 4 PDVEYRCFVGGLAWATDDRALETAFSQYG--EVLDSK----------------------- 38
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+I +RET RSRGFGFVT + + A+E + D+DGR +TVN+A
Sbjct: 39 -IINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEA 84
>gi|240278920|gb|EER42426.1| ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325090181|gb|EGC43491.1| ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 472
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 36/217 (16%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
V+ E LF+GNL ++VD E L FE+ G E+A V+
Sbjct: 225 VDSNEGGNLFIGNLSWNVDEEWLRSEFEEFG--ELAGVR--------------------- 261
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN------KAAPRGT 267
++ +R++ RSRGFG+V + +A KA ++DGR L V+ AAP+
Sbjct: 262 ---IVTDRDSGRSRGFGYVEFTNAADAAKAHAAKKDAELDGRKLNVDFANGRSNAAPKER 318
Query: 268 QPERAPRVFEP----GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGF 323
RA + +++GN+ + + + + F+EHG ++ R+ D E+GR +GF
Sbjct: 319 AQSRAQNFGDQTSPESDTLFIGNIAFSANENMISEAFAEHGSILGVRLPTDPESGRPKGF 378
Query: 324 GFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
G+V SS E A AL+G +L GR++R++ + RQ
Sbjct: 379 GYVQFSSVDEARSAFQALNGADLGGRSMRLDFSSPRQ 415
>gi|115454539|ref|NP_001050870.1| Os03g0670700 [Oryza sativa Japonica Group]
gi|108710321|gb|ABF98116.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|113549341|dbj|BAF12784.1| Os03g0670700 [Oryza sativa Japonica Group]
Length = 196
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 59/81 (72%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE FS +G++++++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
++G+ LDGR I VN A+ R+
Sbjct: 68 GMNGKELDGRNITVNEAQSRR 88
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 26/110 (23%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P + + FVG L + D L F G EI + K
Sbjct: 4 PDVEYRCFVGGLAWATDDRSLEAAFSTYG--EILDSK----------------------- 38
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+I +RET RSRGFGFVT S+ + A+E + ++DGR +TVN+A R
Sbjct: 39 -IINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|320591904|gb|EFX04343.1| nucleolin protein [Grosmannia clavigera kw1407]
Length = 413
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 36/210 (17%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFVGNL ++VD L F +GF A +VI +R
Sbjct: 168 LFVGNLSWNVDDSVLYDEF-------------------KGFDGLTGA-------RVITDR 201
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV---------NKAAPRGTQPERA 272
ET RSRGFG+V +VE A+ A + Y +DGR L + N A P ++ ++
Sbjct: 202 ETQRSRGFGYVEFDSVEHAQAAFDKMTGYFLDGRELKIDFSTGRAKSNDANPAASRAKKY 261
Query: 273 PRVFEP-GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
V P ++VGNL ++ D + FSE V + R+ D E+GR +GFG+V+ S
Sbjct: 262 GDVTSPESDTLFVGNLSFDADEETVSAFFSEVANVKSLRLPTDMESGRPKGFGYVSFYSL 321
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
+ A L+GQ+ GR +R++ + + R
Sbjct: 322 EDSKKAFDTLNGQSCAGRNVRLDYSTPKPR 351
>gi|2267593|gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa Indica Group]
Length = 165
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 57/81 (70%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W DN LE FS +G+++ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
+ G+ LDGR I VN A+ R+
Sbjct: 68 GMSGKELDGRNITVNEAQSRR 88
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 50/110 (45%), Gaps = 26/110 (23%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P D + FVG L + D+ L F G EI E K
Sbjct: 4 PDVDYRCFVGGLAWATDNRSLEAAFSTYG--EILESK----------------------- 38
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+I +RET RSRGFGFVT S+ + A+E ++DGR +TVN+A R
Sbjct: 39 -IINDRETGRSRGFGFVTFSSEQAMRDAIEGMSGKELDGRNITVNEAQSR 87
>gi|297825019|ref|XP_002880392.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
gi|297326231|gb|EFH56651.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
Length = 159
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 56/78 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE FS++G VV+++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ LDGR+I VN A+
Sbjct: 68 GMNGQELDGRSITVNEAQ 85
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F + G V + ++I +
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGDVVDS--------------------------KIIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + + A+E + ++DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFKDEKSMKDAIEGMNGQELDGRSITVNEA 84
>gi|344231201|gb|EGV63083.1| hypothetical protein CANTEDRAFT_106956 [Candida tenuis ATCC 10573]
Length = 231
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 33/214 (15%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E A LFVG L +++D + L FE +G V A +V
Sbjct: 1 EPATLFVGRLSWNIDDDWLKREFEPSGGVISA--------------------------RV 34
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR--- 274
I R T +SRG+G+V + +AEKA++ F +IDGR + ++ + + P + R
Sbjct: 35 IMERATGKSRGYGYVDFESKADAEKALQDFQGKEIDGRPINLDLSTSKPQTPAKNDRAKK 94
Query: 275 ----VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
V P +++GNL + +L + F ++G+V++ R+ +T + +GFG+V S
Sbjct: 95 FGDVVSAPSDTLFIGNLSFNATRDKLFEAFGQYGEVISCRIPTHPDTQQPKGFGYVQYGS 154
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
E A+ AL+G+ ++GR R++ + R SS
Sbjct: 155 IEEAKAALEALNGEYIEGRPCRLDYSTPRDPASS 188
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 27/123 (21%)
Query: 152 EFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFY 211
+ V P D LF+GNL ++ +KL F + G V + H
Sbjct: 97 DVVSAPSDT-LFIGNLSFNATRDKLFEAFGQYGEVISCRIPTH----------------- 138
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+T + +GFG+V ++EEA+ A+E + I+GR ++ + PR +
Sbjct: 139 ---------PDTQQPKGFGYVQYGSIEEAKAALEALNGEYIEGRPCRLDYSTPRDPASSQ 189
Query: 272 APR 274
PR
Sbjct: 190 KPR 192
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 33/201 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A ++VG L ++VD+E LA F+ G E+ E + V++
Sbjct: 212 ANVYVGGLSWNVDNEWLASEFQSCG--EVVEAR------------------------VMF 245
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP-ERAPRVFE- 277
+ + +S+GFGFV T EEA KAV M ++IDGR + + AA + P ER + F
Sbjct: 246 DHQNQKSKGFGFVRFKTAEEAAKAVAMTG-HEIDGRAIRCDFAAEKTDNPVERRAQKFND 304
Query: 278 ----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
P +Y+G L ++++ + + F + G + + DRETG +GFG+V + +
Sbjct: 305 QRSAPAATLYLGGLSYDLNEDAVYEAFGDFGDIQRVSLPTDRETGAPKGFGYVEFADVDQ 364
Query: 334 LNDAIAALDGQNLDGRAIRVN 354
A+ A++G+ L GR IRV+
Sbjct: 365 ATAALEAMNGKELSGRRIRVD 385
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
EP +YVG L W VDN L F G+VV ARV++D + +S+GFGFV + E
Sbjct: 209 EPTANVYVGGLSWNVDNEWLASEFQSCGEVVEARVMFDHQNQKSKGFGFVRFKTAEEAAK 268
Query: 337 AIAALDGQNLDGRAIRVNVAEDR 359
A+ A+ G +DGRAIR + A ++
Sbjct: 269 AV-AMTGHEIDGRAIRCDFAAEK 290
>gi|357473273|ref|XP_003606921.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507976|gb|AES89118.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 164
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 59/78 (75%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE+ FS++G++++++++ DRETGRSRGFGFVT + E + DAI
Sbjct: 8 YRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ++DGR I VN A+
Sbjct: 68 GMNGQDMDGRNITVNEAQ 85
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + DSE L F + G EI + K +I +
Sbjct: 9 RCFVGGLAWATDSEALEKAFSQYG--EIIDSK------------------------IIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + + A+E + D+DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFADEKSMRDAIEGMNGQDMDGRNITVNEA 84
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 34/211 (16%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
E P ++ +FVGNL ++VD E LA F GTVE A
Sbjct: 178 EEPVNSTVFVGNLSWNVDEEMLAATFADCGTVESA------------------------- 212
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR----GTQPE 270
++I ++ET R++GFG+VT + + A A ++DGR + V+ + P+ G +
Sbjct: 213 -RIITDKETGRAKGFGYVTFESAD-ALTAAMALTGTELDGREIRVDVSTPKPPRDGNRQG 270
Query: 271 R--APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
R AP+ P +++GNL + V + + FS++G++V+ R DR+TG +GFG+V
Sbjct: 271 RKEAPQS-APTTTLFLGNLSFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEY 329
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
A+ L+G + GR++R++ A R
Sbjct: 330 GDVETAQKAVEGLNGVEIAGRSLRLDYAGGR 360
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 268 QPERAPRVFEP-GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
+P + P+ EP ++VGNL W VD L F++ G V +AR++ D+ETGR++GFG+V
Sbjct: 170 EPTKKPKTEEPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYV 229
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
T S L A+ AL G LDGR IRV+V+ + R
Sbjct: 230 TFESADALTAAM-ALTGTELDGREIRVDVSTPKPPR 264
>gi|218193471|gb|EEC75898.1| hypothetical protein OsI_12955 [Oryza sativa Indica Group]
Length = 139
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 59/81 (72%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE FS +G++++++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
++G+ LDGR I VN A+ R+
Sbjct: 68 GMNGKELDGRNITVNEAQSRR 88
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 26/110 (23%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P + + FVG L + D L F G EI + K
Sbjct: 4 PDVEYRCFVGGLAWATDDRSLEAAFSTYG--EILDSK----------------------- 38
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+I +RET RSRGFGFVT S+ + A+E + ++DGR +TVN+A R
Sbjct: 39 -IINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|238505292|ref|XP_002383875.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|317151540|ref|XP_001824733.2| nucleolin protein Nsr1 [Aspergillus oryzae RIB40]
gi|220689989|gb|EED46339.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|391872083|gb|EIT81226.1| nuclear localization sequence binding protein [Aspergillus oryzae
3.042]
Length = 525
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 103/214 (48%), Gaps = 40/214 (18%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LFVGNL ++VD L FE+ FG +S ++++
Sbjct: 280 ANLFVGNLSWNVDEAWLQSEFEE--------------FGE------------LSGVRIMT 313
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR-------GTQPERA 272
R+T RSRGFG+V + +A KA E +IDGR + ++ A R G Q
Sbjct: 314 ERDTGRSRGFGYVEYTNAVDAAKAFEAKRDTEIDGRKINLDYATGRPANREQGGFQDRAQ 373
Query: 273 PRVFEPGFR-------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 325
R G + ++VGN+P+ + L +VF + G ++ R+ D E+GR +GFG+
Sbjct: 374 ARARSFGDQASPESDTLFVGNIPFSANEDSLHEVFGQKGSILGIRLPTDPESGRPKGFGY 433
Query: 326 VTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
V SS E +A L+G +DGR +R++ + R
Sbjct: 434 VQFSSVEEAREAFNELNGAEIDGRPVRLDFSTPR 467
>gi|331228813|ref|XP_003327073.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306063|gb|EFP82654.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 637
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 107/213 (50%), Gaps = 47/213 (22%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VG L ++VDSE L FE G + A +VI +R
Sbjct: 360 VYVGGLSWNVDSEWLKSEFESCGPIVDA--------------------------RVITDR 393
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
+T +S+GFG++ T E A+KA+E + ++DGR L V+ +APR ERAP + F
Sbjct: 394 DTQKSKGFGYIDFETCEGAQKAIETKNGTELDGRTLKVDLSAPRA---ERAPAENKRDFS 450
Query: 282 ----------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
++VGNLP+ + ++F+E+G V + R+ D ET R +GFG+V ++
Sbjct: 451 KEELSAESTTLFVGNLPFSATQDSVWEIFAEYGDVNSVRLPTDPETQRVKGFGYVEFAT- 509
Query: 332 TELNDAIAAL-----DGQNLDGRAIRVNVAEDR 359
L A AA+ +G +D R R++ ++ R
Sbjct: 510 --LESARAAVEKGRGEGVYIDNRQARLDFSQPR 540
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 2/96 (2%)
Query: 269 PERAPRVFEPGFR-IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
P++A + E G + +YVG L W VD+ L+ F G +V+ARV+ DR+T +S+GFG++
Sbjct: 347 PKKA-KAAEEGIKNVYVGGLSWNVDSEWLKSEFESCGPIVDARVITDRDTQKSKGFGYID 405
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 363
+ AI +G LDGR ++V+++ R R+
Sbjct: 406 FETCEGAQKAIETKNGTELDGRTLKVDLSAPRAERA 441
>gi|388504962|gb|AFK40547.1| unknown [Lotus japonicus]
Length = 285
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 31/207 (14%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+V LP+ + + + LF + GTV E+ + G G
Sbjct: 87 KLYVFTLPWSMSAADIKDLFGQCGTVTDVEI----IRGKDG------------------- 123
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA---PRGTQPERAPRVFE 277
R +G+ FVTM++ EEA+ AV+ F ++ GR+L V A +P E
Sbjct: 124 ----RGKGYAFVTMASGEEAQAAVDKFDTLELSGRILRVELAKRFKKPSPPGPPSPPPSE 179
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKV-VNARVVYDRETGRSRGFGFVTMSSETELND 336
IY NL W+V + L + F+E+ K ++AR+V+D +G + G+GF++ ++ E
Sbjct: 180 ARHVIYASNLAWKVRSTHLREFFTENFKAPLSARIVFDTPSGWATGYGFISYLTKEEAEA 239
Query: 337 AIAALDGQNLDGRAIRVNVAEDRQRRS 363
AI+ALDG+ L GR++ + ++E + + +
Sbjct: 240 AISALDGKELMGRSLFLKISEKKVKEA 266
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
gi|222859243|gb|EEE96790.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 62/83 (74%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG + ++ D+ L++ F ++G VV AR++ DRETGRSRGFGFVT +S E + AI A
Sbjct: 41 KLFVGGISFQTDDNSLKEAFDKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAIQA 100
Query: 341 LDGQNLDGRAIRVNVAEDRQRRS 363
LDGQ+L GR +RVN A +R +R+
Sbjct: 101 LDGQDLHGRRVRVNYATERPQRT 123
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 29/112 (25%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLFVG + + D L F+K G V A ++I
Sbjct: 40 SKLFVGGISFQTDDNSLKEAFDKYGNVVEA--------------------------RIIM 73
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+RET RSRGFGFVT ++ EEA A++ D+ GR + VN A R P+R
Sbjct: 74 DRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYATER---PQR 122
>gi|255549774|ref|XP_002515938.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223544843|gb|EEF46358.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 608
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 23/202 (11%)
Query: 172 DSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGF 231
D K L+ K + ++ + FH +F + F + VI +SRGFGF
Sbjct: 194 DELKFTNLYVKNLSKDMTQDAFHNMF----------SAFGEIISAVIMQDHNGKSRGFGF 243
Query: 232 VTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF----------R 281
V + E+A+KAV+ + Y ++ R L V +A + + + ++ F
Sbjct: 244 VDFESPEDAKKAVDALNGYQLESRTLFVGRAQAKAERKKILQHEYKDIFNTHMEKFKASN 303
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVV-YDRETGRSRGFGFVTMSSETELNDAIAA 340
+YV NL +DN +L+++FS GK+V+A+V+ YD G SRGFGFV SS E A+ A
Sbjct: 304 LYVKNLALCIDNDKLQELFSCSGKIVSAKVMRYD--NGASRGFGFVCFSSPEEAKKALNA 361
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
L+G G+++ V +A+ ++ R
Sbjct: 362 LNGAVFQGKSLYVAMAQCKRDR 383
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 36/211 (17%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
+P L+VG+L +V L +F G + + H+ C++
Sbjct: 14 DPRPRLSLYVGDLDPEVTEMNLRTVFSSMGPI-------------RNVHLCRCSL----- 55
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
T RS +G+V +A KA+ + + G+L+ R +R P
Sbjct: 56 --------TGRSLCYGYVNFYRPYDAYKALSNLNHTYLKGKLM-------RIMWCQRNPC 100
Query: 275 VFEPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
+ G +YV NL +D+A L+ +FS+ G +++ +VV E G+S+G+GFV SE
Sbjct: 101 ARKSGIGNLYVKNLDASIDSAGLQSLFSKFGTILSCKVV--EEHGKSKGYGFVQFDSEDS 158
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
A AL L + + V+ + R++
Sbjct: 159 ALAARTALHDTMLKEKKLYVSRFVKKSERTT 189
>gi|326515712|dbj|BAK07102.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 104
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 60/81 (74%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L+ FS++G V++++++ DRETGRSRGFGFVT +S+ + AI
Sbjct: 6 YRCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 65
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
A++GQ+LDGR I VN A+ R+
Sbjct: 66 AMNGQDLDGRNITVNEAQSRR 86
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D + L F K G V + ++I +
Sbjct: 7 RCFVGGLAWATDDQSLQNAFSKYGDVIDS--------------------------KIITD 40
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGFVT ++ E +A+E + D+DGR +TVN+A R
Sbjct: 41 RETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQSR 85
>gi|449547299|gb|EMD38267.1| hypothetical protein CERSUDRAFT_113433 [Ceriporiopsis subvermispora
B]
Length = 679
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 102/211 (48%), Gaps = 38/211 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V N+ +V E+ LFE+ G V A VI
Sbjct: 231 VYVKNIDAEVTDEEFRQLFEQFGNVTSA---------------------------VIQRD 263
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
E RS+GFGFV EEA+K VE H ++++G+ L V +A + + E + +E
Sbjct: 264 EEGRSKGFGFVNFEKHEEAQKGVESLHDFELNGKKLFVTRAQKKAEREEELRKSYEQAKN 323
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +Y+ NL EVD+ RL Q F G + +A+V+ D E G S+GFGFV SS
Sbjct: 324 EKLSKYQGVNLYIKNLEDEVDDERLRQEFEPFGTITSAKVMRD-EKGSSKGFGFVCFSSP 382
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
E A+A ++ + + + + V++A+ R+ R
Sbjct: 383 DEATKAVAEMNNKMIGTKPLYVSLAQRREVR 413
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
V+ ++V + T RS G+ +V + E+A+E + I GR A R +R
Sbjct: 74 VASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSLIKGR-------ACRIMWSQR 126
Query: 272 APRVFEPG-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
P + + G I++ NL +DN L F+ G V++ +V D E GRS+G+GFV +
Sbjct: 127 DPALRKTGQGNIFIKNLDEGIDNKALHDTFAAFGNVLSCKVATD-EHGRSKGYGFVHYET 185
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
+ AI A++G L+ + + V R+ R S
Sbjct: 186 AEAADTAIKAVNGMLLNDKKVYVGPHISRKERQS 219
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 199 NQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 258
N+ H A V +V + E RS+G+GFV T E A+ A++ ++G LL
Sbjct: 149 NKALHDTFAAFGNVLSCKVATD-EHGRSKGYGFVHYETAEAADTAIKA-----VNGMLLN 202
Query: 259 VNK--AAPRGTQPERAPRVFEPGFR---IYVGNLPWEVDNARLEQVFSEHGKVVNARVVY 313
K P ++ ER ++ E + +YV N+ EV + Q+F + G V +A +
Sbjct: 203 DKKVYVGPHISRKERQSKIEEMKAQFTNVYVKNIDAEVTDEEFRQLFEQFGNVTSAVIQR 262
Query: 314 DRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
D E GRS+GFGFV E + +L L+G+ + V A+ + R
Sbjct: 263 DEE-GRSKGFGFVNFEKHEEAQKGVESLHDFELNGKKLFVTRAQKKAER 310
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVG L V A L ++F+ G V + RV D T RS G+ +V + + A+ L
Sbjct: 50 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQL 109
Query: 342 DGQNLDGRAIRV 353
+ + GRA R+
Sbjct: 110 NYSLIKGRACRI 121
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 38/211 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NL +V + LFE+ G V A VI
Sbjct: 231 IYVKNLDPEVTQDDFVKLFEQFGNVTSA---------------------------VIQTD 263
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
E +SRGFGFV T EEA+KAVE H + GR L V++A + + E + +E
Sbjct: 264 EQGQSRGFGFVNFETHEEAQKAVETLHDSEYHGRKLFVSRAQKKAEREEELRKSYEQAKV 323
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +Y+ NL ++D+ RL Q F G + +A+V+ D E G S+GFGFV SS
Sbjct: 324 EKMSKYQGVNLYIKNLEDDIDDERLRQEFEPFGSITSAKVMRD-EKGTSKGFGFVCFSSP 382
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
E A+A ++ + + + + V++A+ R+ R
Sbjct: 383 DEATKAVAEMNNKMIGSKPLYVSLAQRREVR 413
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
V+ ++V + T RS G+ +V + E+A+E + I GR A R +R
Sbjct: 70 VASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSLIKGR-------ACRIMWSQR 122
Query: 272 APRVFEPG-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
P + + G I++ NL ++DN L F+ G V++ +V D E GRS+G+GFV +
Sbjct: 123 DPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATD-EHGRSKGYGFVHYET 181
Query: 331 ETELNDAIAALDGQNLDGRAIRVN-----VAEDRQRRSSF 365
AI A++G L+ + + V A R+R+S
Sbjct: 182 AEAAETAIKAVNGMLLNDKKVYVGHHISRKASSRERQSKL 221
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P +YVG L V A L ++F+ G V + RV D T RS G+ +V + + A
Sbjct: 42 PSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERA 101
Query: 338 IAALDGQNLDGRAIRV 353
+ L+ + GRA R+
Sbjct: 102 LEQLNYSLIKGRACRI 117
>gi|218200393|gb|EEC82820.1| hypothetical protein OsI_27609 [Oryza sativa Indica Group]
Length = 164
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 86/157 (54%), Gaps = 11/157 (7%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP-----RGTQPE 270
Q+ + ET SRG GFVTM ++ EA A+ +D+DGR + V ++ R
Sbjct: 9 QISRDPETGLSRGCGFVTMRSLPEARTAMNALDGFDLDGREMLVKLSSDVVSKRRNINMT 68
Query: 271 RAP----RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
P +FE +IYVGN+ W V+ L + FS+ G VV+ R++ DR+ GR R +GF+
Sbjct: 69 HTPPVKDHIFESPHKIYVGNIAWSVEPQELREYFSQCGTVVSTRLLTDRKGGRGRVYGFL 128
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVA-EDRQRR 362
+ +S EL A+ LD + GR I V A E+RQ R
Sbjct: 129 SFASAEELEAAL-KLDNTHFHGRNILVRQAHEERQAR 164
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%)
Query: 308 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 358
N ++ D ETG SRG GFVTM S E A+ ALDG +LDGR + V ++ D
Sbjct: 7 NPQISRDPETGLSRGCGFVTMRSLPEARTAMNALDGFDLDGREMLVKLSSD 57
>gi|363754371|ref|XP_003647401.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891038|gb|AET40584.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
Length = 448
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 33/215 (15%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P E A +FVG L + +D E L FE G V A
Sbjct: 207 PTEPATIFVGRLSWSIDDEWLKTEFEHIGGVISA-------------------------- 240
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN--KAAPRGTQPERAP 273
+VIY R T+RSRG+G+V AEKA++ +IDGR + V+ + P E
Sbjct: 241 RVIYERGTERSRGYGYVDFEDKSYAEKAIKEMQGKEIDGRPINVDMSTSKPASNPKEDRA 300
Query: 274 RVF-----EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
+ F +P +++GNL + D + ++F ++G +++ R+ ET + +GFG+V
Sbjct: 301 KKFGDVPSQPSDTLFLGNLSFNADRDNIFELFKDYGSIISVRIPTHPETNQPKGFGYVQY 360
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 363
+S E A+ L G+ +D R +R++ + R +S
Sbjct: 361 ASIEEAQKALDKLQGEYIDNRPVRLDFSSPRPPQS 395
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 60/84 (71%)
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
E +R +VG L W D+ L+Q FS++G++++A+++ DRETGRSRGFGFVT SE +
Sbjct: 3 ETEYRCFVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQ 62
Query: 337 AIAALDGQNLDGRAIRVNVAEDRQ 360
AI ++G+ LDGR I VN A+ R+
Sbjct: 63 AIEEMNGKELDGRNITVNEAQSRR 86
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F + G EI + K +I +
Sbjct: 7 RCFVGGLAWATDDNNLQQAFSQYG--EILDAK------------------------IIND 40
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGFVT + E +A+E + ++DGR +TVN+A R
Sbjct: 41 RETGRSRGFGFVTFGSEESMRQAIEEMNGKELDGRNITVNEAQSR 85
>gi|116180414|ref|XP_001220056.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
gi|88185132|gb|EAQ92600.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
Length = 475
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 102/211 (48%), Gaps = 37/211 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VGNL + VD L F Q V A +V+
Sbjct: 221 ATLWVGNLGWGVDDNALYEEF-------------------QSIEGIVSA-------RVVS 254
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-------APRGTQPERA 272
++ET RSRGFG+V + E A+KA + + GR L ++ A AP +RA
Sbjct: 255 DKETGRSRGFGYVDFDSAEAAQKAYDEKSGAFLQGRDLRLDFASKPSADSAPNARAADRA 314
Query: 273 PR----VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
+ + P ++VGNLP+ D + + F+E +V + R+ D+E+GR +GF +VT
Sbjct: 315 KKHGDVISPPSDTLFVGNLPFSADESSVSNYFNEVAQVQSLRIPTDQESGRPKGFAYVTF 374
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
SS + AL+G +LDGR +R++ A+ R
Sbjct: 375 SSIDDAKKVFEALNGGDLDGRPVRLDYAKPR 405
>gi|402225922|gb|EJU05982.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 541
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 101/205 (49%), Gaps = 34/205 (16%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+ V NL ++VD + L FE+ G EI V+ +R
Sbjct: 290 IIVKNLSWNVDDDWLKTEFEECG--EIVSVRVQL------------------------DR 323
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNK--AAPRGTQPERAPRV---- 275
++ RSRGFGF+ ST + KA+E ++DGR + V+K + PR TQ RA +
Sbjct: 324 QSGRSRGFGFIDFSTSDAVAKALETMQGKEVDGRAIAVDKTESNPRNTQ-ARAAKFGDTP 382
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
EP I+VGN+ + D L Q F+++G V + R+ DRETG+ +GF +V +
Sbjct: 383 SEPSQTIFVGNVAFSADEDALWQTFADYGAVRSVRLPTDRETGQPKGFAYVEFEDQAGAT 442
Query: 336 DAI-AALDGQNLDGRAIRVNVAEDR 359
A A +G + GR +R++ ++ R
Sbjct: 443 AAFEAGKEGLEIGGRPVRLDYSQPR 467
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 51/82 (62%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
I V NL W VD+ L+ F E G++V+ RV DR++GRSRGFGF+ S+ + A+ +
Sbjct: 290 IIVKNLSWNVDDDWLKTEFEECGEIVSVRVQLDRQSGRSRGFGFIDFSTSDAVAKALETM 349
Query: 342 DGQNLDGRAIRVNVAEDRQRRS 363
G+ +DGRAI V+ E R +
Sbjct: 350 QGKEVDGRAIAVDKTESNPRNT 371
>gi|400597074|gb|EJP64818.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 769
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 104/208 (50%), Gaps = 38/208 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFV +LP +V +E LA F F V V+ ++
Sbjct: 44 LFVRSLPPNVTNESLAEFF--------------------------SEYFPVKHATVVIDQ 77
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR-------GTQPERAPR 274
+T SRGFGFVT++ ++A++A +F + + R + V A PR G QP + P
Sbjct: 78 QTKESRGFGFVTLADADDAKQAQIVFDKKRWEDRTIRVEVAEPRQRKEATEGAQPRQKPG 137
Query: 275 V--FEPGFRIYVGNLPWEVDNA-RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
FEP ++ V NLPW + N+ +L +F +GKV A + ++ G+ +GFGFVT+ +
Sbjct: 138 KPEFEPTPKLIVRNLPWSIRNSEQLGHLFRSYGKVKFADLPKNK--GKLKGFGFVTLRGK 195
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDR 359
A+ ++G+ +DGR + V+ A D+
Sbjct: 196 KNAEKALEGINGKEIDGRTLAVDWAVDK 223
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++V +LP V N L + FSE+ V +A VV D++T SRGFGFVT++ + A
Sbjct: 44 LFVRSLPPNVTNESLAEFFSEYFPVKHATVVIDQQTKESRGFGFVTLADADDAKQAQIVF 103
Query: 342 DGQNLDGRAIRVNVAEDRQRRSS 364
D + + R IRV VAE RQR+ +
Sbjct: 104 DKKRWEDRTIRVEVAEPRQRKEA 126
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 29/112 (25%)
Query: 161 KLFVGNLPYDV-DSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
KL V NLP+ + +SE+L LF G +VKF L N+G
Sbjct: 146 KLIVRNLPWSIRNSEQLGHLFRSYG-----KVKFADLPKNKG------------------ 182
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+ +GFGFVT+ + AEKA+E + +IDGR L V+ A + T +R
Sbjct: 183 -----KLKGFGFVTLRGKKNAEKALEGINGKEIDGRTLAVDWAVDKDTWEQR 229
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I+V NLP+ ++ L+ FS G V ARVV D+ T R G FV E + I
Sbjct: 321 IFVRNLPFTTNDEHLKSFFSSFGNVRYARVVMDKATDRPAGTAFVCFYQEEDAKTCI 377
>gi|30681492|ref|NP_850017.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|330252116|gb|AEC07210.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 159
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE F+++G V++++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ+LDGR+I VN A+
Sbjct: 68 GMNGQDLDGRSITVNEAQ 85
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F + G V + ++I +
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDS--------------------------KIIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + + A+E + D+DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEA 84
>gi|21553354|gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
Length = 175
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE F+++G V++++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ+LDGR+I VN A+
Sbjct: 68 GMNGQDLDGRSITVNEAQ 85
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F + G V + ++I +
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDS--------------------------KIIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + + A+E + D+DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEA 84
>gi|227204227|dbj|BAH56965.1| AT2G21660 [Arabidopsis thaliana]
Length = 153
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE F+++G V++++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ+LDGR+I VN A+
Sbjct: 68 GMNGQDLDGRSITVNEAQ 85
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F + G V + ++I +
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDS--------------------------KIIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + + A+E + D+DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEA 84
>gi|15226605|ref|NP_179760.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|544424|sp|Q03250.1|GRP7_ARATH RecName: Full=Glycine-rich RNA-binding protein 7
gi|16226372|gb|AAL16149.1|AF428381_1 At2g22292/F2G1.7_ [Arabidopsis thaliana]
gi|16301|emb|CAA78711.1| glycine rich protein [Arabidopsis thaliana]
gi|166837|gb|AAA32853.1| RNA-binding protein [Arabidopsis thaliana]
gi|4567224|gb|AAD23639.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
gi|15810032|gb|AAL06943.1| At2g21660/F2G1.7 [Arabidopsis thaliana]
gi|330252115|gb|AEC07209.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 176
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE F+++G V++++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ+LDGR+I VN A+
Sbjct: 68 GMNGQDLDGRSITVNEAQ 85
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F + G V + ++I +
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDS--------------------------KIIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + + A+E + D+DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEA 84
>gi|452822947|gb|EME29962.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 368
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 95/202 (47%), Gaps = 30/202 (14%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
++K+FVG L ++ E L FE G V C + +
Sbjct: 49 NSKIFVGGLSWETTEETLQKYFESYGRV------------------LDCVI--------M 82
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP 278
++ T RGFGFVT E A++A R+++DGR + KA P+ R+ +V +P
Sbjct: 83 RDKHTGHPRGFGFVTFEKEESADRAATK--RHELDGRQVEAKKAVPKAEYITRS-QVTKP 139
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+I+VG LP + F G VV A ++YD +TG SRGFGFVT SSE ++ + +
Sbjct: 140 TRKIFVGGLPLSCTEEDFMEYFERLGHVVEAHIMYDHQTGISRGFGFVTFSSE-DMVEKV 198
Query: 339 AALDGQNLDGRAIRVNVAEDRQ 360
+ G+ + V AE +
Sbjct: 199 FEQSQHEIKGKIVEVKKAEPKH 220
>gi|18103931|emb|CAC83314.1| glycine rich RNA binding protein [Oryza sativa Indica Group]
Length = 194
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 58/81 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE FS +G+++ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
++G+ LDGR I VN A+ R+
Sbjct: 68 GMNGKELDGRNITVNEAQSRR 88
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 26/110 (23%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P + + FVG L + D L F G EI E K
Sbjct: 4 PDVEYRCFVGGLAWATDDRSLEAAFSTYG--EILESK----------------------- 38
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+I +RET RSRGFGFVT S+ + A+E + ++DGR +TVN+A R
Sbjct: 39 -IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|116787064|gb|ABK24360.1| unknown [Picea sitchensis]
Length = 365
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 101/208 (48%), Gaps = 37/208 (17%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P KLFV L ++ S+ L FE+ G +E
Sbjct: 66 PAHRKLFVRGLAWETSSQTLCDAFEQYGEIEEGA-------------------------- 99
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR---GTQPERAP 273
VI ++ + +SRGFGFVT ++ A+KA++ + IDGR+ N A G ++A
Sbjct: 100 VIMDKASGKSRGFGFVTFKHMDSAQKALKEPSK-TIDGRITVSNLAVASTGPGQSADQAQ 158
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
R ++Y+G L ++ N +L +VFS++G++ V YD+ T +SRGF FVT +
Sbjct: 159 R------KLYIGGLSYDTANDKLLEVFSKYGEIEEGSVAYDKNTNKSRGFAFVTFKTVEA 212
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDRQR 361
A+ + + +DGR + V +A D Q+
Sbjct: 213 TKRALKEPN-KTIDGRTVTVKLAADGQK 239
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 28/116 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL++G L YD ++KL +F K G +E V Y+
Sbjct: 160 KLYIGGLSYDTANDKLLEVFSKYGEIEEGS--------------------------VAYD 193
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP-RGTQPERAPRV 275
+ T++SRGF FVT TVE ++A++ ++ IDGR +TV AA + +P+ P V
Sbjct: 194 KNTNKSRGFAFVTFKTVEATKRALKEPNK-TIDGRTVTVKLAADGQKEKPQSQPAV 248
>gi|154296105|ref|XP_001548485.1| hypothetical protein BC1G_12782 [Botryotinia fuckeliana B05.10]
Length = 518
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 104/226 (46%), Gaps = 42/226 (18%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
EE E LFVGNL +++D E L FE+ FG
Sbjct: 257 EETAEDNGSKNLFVGNLSWNIDDEWLYREFEE--------------FGE----------- 291
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 270
+S +VI ++ T RS+GFG+V +A A+ IDGR V+ + PR T
Sbjct: 292 -ISGARVISDKATGRSKGFGYVEFVKSSDAAAALAAKKGALIDGREANVDFSTPRDTT-- 348
Query: 271 RAPR-------------VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRET 317
APR P +++GNL ++ D + + F EHG VVN R+ D+ET
Sbjct: 349 -APRERANNRAAQFGDAKNPPSDTLFLGNLSFDADENVVGEAFGEHGTVVNVRLPTDQET 407
Query: 318 GRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 363
G +GFG+VT S + A A+ G ++ GR +R++ A R RS
Sbjct: 408 GNPKGFGYVTFGSVEDATAAYDAMMGADIAGRPVRLDYATPRPERS 453
>gi|75319742|sp|Q43472.1|GRP_HORVU RecName: Full=Glycine-rich RNA-binding protein blt801; AltName:
Full=Low temperature-responsive RNA-binding protein
gi|1229138|gb|AAB07749.1| low temperature-responsive RNA-binding protein [Hordeum vulgare
subsp. vulgare]
Length = 161
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 60/81 (74%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L+ FS++G V++++++ DRETGRSRGFGFVT +S+ + AI
Sbjct: 6 YRCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 65
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
A++GQ+LDGR I VN A+ R+
Sbjct: 66 AMNGQDLDGRNITVNEAQSRR 86
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D + L F K G V + ++I +
Sbjct: 7 RCFVGGLRWATDDQSLQNAFSKYGDVIDS--------------------------KIITD 40
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGFVT ++ E +A+E + D+DGR +TVN+A R
Sbjct: 41 RETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQSR 85
>gi|387861095|gb|AFK08577.1| glycine-rich RNA binding protein 2b [Camelina sativa]
gi|387861101|gb|AFK08580.1| glycine-rich RNA binding protein 2b [Camelina sativa]
Length = 156
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 58/79 (73%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W D+A L F+ G+VV+A+V+ DRETGRSRGFGFV S ET + AI+
Sbjct: 37 KLFVGGLSWGTDDASLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFSDETAASAAISE 96
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG++L+GR IRVN A DR
Sbjct: 97 MDGKDLNGRNIRVNPANDR 115
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 45/110 (40%), Gaps = 26/110 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG L + D L F G E+ + K VI +
Sbjct: 37 KLFVGGLSWGTDDASLRDAFAHFG--EVVDAK------------------------VIVD 70
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 270
RET RSRGFGFV S A A+ D++GR + VN A R + P
Sbjct: 71 RETGRSRGFGFVNFSDETAASAAISEMDGKDLNGRNIRVNPANDRPSAPR 120
>gi|169244425|gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|306415963|gb|ADM86856.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|385718874|gb|AFI71864.1| Glycin-rich RNA binding protein [Oryza sativa]
Length = 161
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 58/81 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE FS +G+++ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
++G+ LDGR I VN A+ R+
Sbjct: 68 GMNGKELDGRNITVNEAQSRR 88
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 26/110 (23%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P + + FVG L + D L F G EI E K
Sbjct: 4 PDVEYRCFVGGLAWATDDRSLEAAFSTYG--EILESK----------------------- 38
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+I +RET RSRGFGFVT S+ + A+E + ++DGR +TVN+A R
Sbjct: 39 -IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|125537516|gb|EAY84004.1| hypothetical protein OsI_39235 [Oryza sativa Indica Group]
Length = 161
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 58/81 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE FS +G+++ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
++G+ LDGR I VN A+ R+
Sbjct: 68 GMNGKELDGRNITVNEAQSRR 88
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 26/110 (23%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P + + FVG L + D L F G EI E K
Sbjct: 4 PDVEYRCFVGGLAWATDDRSLEAAFSTYG--EILESK----------------------- 38
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+I +RET RSRGFGFVT S+ + A+E + ++DGR +TVN+A R
Sbjct: 39 -IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|449297589|gb|EMC93607.1| hypothetical protein BAUCODRAFT_76311, partial [Baudoinia
compniacensis UAMH 10762]
Length = 253
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 103/208 (49%), Gaps = 39/208 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFVG L ++VD E L FE+ G E+A + ++ +R
Sbjct: 3 LFVGGLSWNVDEEWLMREFEEFG--ELASTR------------------------IMTDR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF----- 276
ET +S+GFGFV +V+ A KAVE +IDGR + ++ R +R P+
Sbjct: 37 ETGKSKGFGFVEFKSVDGAIKAVEGKQGGEIDGRNVRLDFTEGRSQNNQRTPQQRSSDRA 96
Query: 277 --------EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
EP ++VGN+ ++ + + +VFSE+G + R+ DR+TG +GFG+V M
Sbjct: 97 GKFGDVPKEPSSTLFVGNVSFDANEDMVTEVFSEYGSIKAVRLPTDRDTGALKGFGYVEM 156
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVA 356
S + A AL G + GR+IR++ +
Sbjct: 157 FSIDDAKVAFEALQGAEIAGRSIRLDYS 184
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++VG L W VD L + F E G++ + R++ DRETG+S+GFGFV S A+
Sbjct: 3 LFVGGLSWNVDEEWLMREFEEFGELASTRIMTDRETGKSKGFGFVEFKSVDGAIKAVEGK 62
Query: 342 DGQNLDGRAIRVNVAEDRQR 361
G +DGR +R++ E R +
Sbjct: 63 QGGEIDGRNVRLDFTEGRSQ 82
>gi|4704605|gb|AAD28176.1|AF109917_1 glycine-rich RNA-binding protein [Picea glauca]
Length = 155
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 58/78 (74%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W D+ L++ FS +G+VV ++++ DRETGRSRGFGFVT + E + DAI
Sbjct: 8 FRCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQSMRDAID 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
A++G+ LDGR+I VN A+
Sbjct: 68 AMNGKMLDGRSITVNPAQ 85
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F G E+ E K +I +
Sbjct: 9 RCFVGGLAWSTDDRSLQEAFSPYG--EVVESK------------------------IISD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + + A++ + +DGR +TVN A
Sbjct: 43 RETGRSRGFGFVTFNDEQSMRDAIDAMNGKMLDGRSITVNPA 84
>gi|544423|sp|Q99070.1|GRP2_SORBI RecName: Full=Glycine-rich RNA-binding protein 2
gi|21625|emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 168
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 57/78 (73%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W +N LEQ F+ G+V++++V+ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 NMNGKELDGRNITVNQAQ 85
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + ++E L F G V + +VI +
Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDS--------------------------KVITD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT S+ + A+E + ++DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQA 84
>gi|347441280|emb|CCD34201.1| hypothetical protein [Botryotinia fuckeliana]
Length = 492
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 103/226 (45%), Gaps = 42/226 (18%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
EE E LFVGNL +++D E L FE+ G +
Sbjct: 231 EETAEDNGSKNLFVGNLSWNIDDEWLYREFEEFGEI------------------------ 266
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 270
S +VI ++ T RS+GFG+V +A A+ IDGR V+ + PR T
Sbjct: 267 --SGARVISDKATGRSKGFGYVEFVKSSDAAAALAAKKGALIDGREANVDFSTPRDTT-- 322
Query: 271 RAPR-------------VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRET 317
APR P +++GNL ++ D + + F EHG VVN R+ D+ET
Sbjct: 323 -APRERANNRAAQFGDAKNPPSDTLFLGNLSFDADENVVGEAFGEHGTVVNVRLPTDQET 381
Query: 318 GRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 363
G +GFG+VT S + A A+ G ++ GR +R++ A R RS
Sbjct: 382 GNPKGFGYVTFGSVEDATAAYDAMMGADIAGRPVRLDYATPRPERS 427
>gi|118487563|gb|ABK95608.1| unknown [Populus trichocarpa]
Length = 133
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 58/80 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G LPW D+ L+ FS G+V ARV+ DRETGRSRGFGFV S ++A++A
Sbjct: 37 KLFIGGLPWSTDDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVENASEALSA 96
Query: 341 LDGQNLDGRAIRVNVAEDRQ 360
+DGQNL GR +RV+ AE+R+
Sbjct: 97 MDGQNLGGRTVRVSFAEERR 116
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLF+G LP+ D + L F G E+ E + VI
Sbjct: 36 SKLFIGGLPWSTDDQTLKDAFSGFG--EVTEAR------------------------VIM 69
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RSRGFGFV +VE A +A+ ++ GR + V+ A R
Sbjct: 70 DRETGRSRGFGFVHYDSVENASEALSAMDGQNLGGRTVRVSFAEER 115
>gi|224060337|ref|XP_002300149.1| predicted protein [Populus trichocarpa]
gi|222847407|gb|EEE84954.1| predicted protein [Populus trichocarpa]
Length = 133
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 58/80 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G LPW D+ L+ FS G+V ARV+ DRETGRSRGFGFV S ++A++A
Sbjct: 37 KLFIGGLPWSADDQTLKDAFSGFGEVTEARVIMDRETGRSRGFGFVHYDSVENASEALSA 96
Query: 341 LDGQNLDGRAIRVNVAEDRQ 360
+DGQNL GR +RV+ AE+R+
Sbjct: 97 MDGQNLGGRTVRVSFAEERR 116
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLF+G LP+ D + L F G E+ E + VI
Sbjct: 36 SKLFIGGLPWSADDQTLKDAFSGFG--EVTEAR------------------------VIM 69
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RSRGFGFV +VE A +A+ ++ GR + V+ A R
Sbjct: 70 DRETGRSRGFGFVHYDSVENASEALSAMDGQNLGGRTVRVSFAEER 115
>gi|444318191|ref|XP_004179753.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
gi|387512794|emb|CCH60234.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
Length = 403
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 108/226 (47%), Gaps = 35/226 (15%)
Query: 140 EESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGN 199
EES E + +E EP A +FVG L + +D E L FE G V A
Sbjct: 144 EESSESKKQKPDESEEP---ATIFVGRLSWSIDDEWLKTEFEPIGGVLSA---------- 190
Query: 200 QGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV 259
+VIY + TDRSRG+G+V AEKA++ +IDGR +
Sbjct: 191 ----------------RVIYEKGTDRSRGYGYVDFKNKTFAEKAIKEMQGKEIDGRPINC 234
Query: 260 N--KAAPRGTQPERAPRV----FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVY 313
+ + P +RA + EP +++GNL ++ D + +VFS++G++++ R+
Sbjct: 235 DMSTSKPASNGGDRAKKFGDTPSEPSETLFLGNLSFDADRDNIYEVFSKYGEIISVRIPT 294
Query: 314 DRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
ET + +GFG+V A+ AL G+ ++ R +R++ + R
Sbjct: 295 HPETEQPKGFGYVQYGDVESAKKALDALQGEYINNRPVRLDFSTPR 340
>gi|326493798|dbj|BAJ85361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 60/84 (71%)
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
E +R +VG L W D+ L+ FS++G++++A+++ DRETGRSRGFGFVT SE +
Sbjct: 3 ETEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQ 62
Query: 337 AIAALDGQNLDGRAIRVNVAEDRQ 360
AI ++G+ LDGR+I VN A+ R+
Sbjct: 63 AIEEMNGKELDGRSITVNEAQSRR 86
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F + G EI + K +I +
Sbjct: 7 RCFVGGLAWATDDHNLQAAFSQYG--EILDAK------------------------IIND 40
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGFVT + E +A+E + ++DGR +TVN+A R
Sbjct: 41 RETGRSRGFGFVTFGSEESMRQAIEEMNGKELDGRSITVNEAQSR 85
>gi|222639809|gb|EEE67941.1| hypothetical protein OsJ_25829 [Oryza sativa Japonica Group]
Length = 164
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 85/155 (54%), Gaps = 11/155 (7%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP-----RGTQPE 270
Q+ + ET SRG GFVTM ++ EA A+ +D+DGR + V ++ R
Sbjct: 9 QISRDPETGLSRGCGFVTMRSLPEARTAMNALDGFDLDGREMLVKLSSDVVSKRRNINMT 68
Query: 271 RAP----RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
P +FE +IYVGN+ W V+ L + FS+ G VV+ R++ DR+ GR R +GF+
Sbjct: 69 HTPPVKDHIFESPHKIYVGNIAWSVEPQELREYFSQCGTVVSTRLLTDRKGGRGRVYGFL 128
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVA-EDRQ 360
+ +S EL A+ LD + GR I V A E+RQ
Sbjct: 129 SFASAEELEAAL-KLDNTHFHGRNILVRQAHEERQ 162
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%)
Query: 308 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 358
N ++ D ETG SRG GFVTM S E A+ ALDG +LDGR + V ++ D
Sbjct: 7 NPQISRDPETGLSRGCGFVTMRSLPEARTAMNALDGFDLDGREMLVKLSSD 57
>gi|390602556|gb|EIN11949.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 161
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 59/79 (74%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W + L FS +G+++++ V+ DR+TGRSRGFGFVT SS E ++AIA+
Sbjct: 4 KVYVGNLSWNTTDESLRAAFSHYGQILDSIVMRDRDTGRSRGFGFVTFSSSAEADNAIAS 63
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L+ Q+LDGR IRVN+A R
Sbjct: 64 LNEQDLDGRRIRVNLANAR 82
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
AK++VGNL ++ E L F G + + + V+
Sbjct: 3 AKVYVGNLSWNTTDESLRAAFSHYGQI-LDSI-------------------------VMR 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+R+T RSRGFGFVT S+ EA+ A+ + D+DGR + VN A R
Sbjct: 37 DRDTGRSRGFGFVTFSSSAEADNAIASLNEQDLDGRRIRVNLANAR 82
>gi|336371226|gb|EGN99565.1| hypothetical protein SERLA73DRAFT_159820 [Serpula lacrymans var.
lacrymans S7.3]
Length = 127
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 58/79 (73%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W + L + FSE+G+VV++ V+ DRETGRSRGFGFVT SSE E AI +
Sbjct: 4 KVYVGNLSWSTTDDTLREAFSEYGQVVDSIVMRDRETGRSRGFGFVTFSSEQEAEAAINS 63
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L Q+LDGR I+VN+A R
Sbjct: 64 LHEQDLDGRRIKVNLANAR 82
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K++VGNL + + L F + G V V ++ V+ +
Sbjct: 4 KVYVGNLSWSTTDDTLREAFSEYGQV-------------------VDSI-------VMRD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGFVT S+ +EAE A+ H D+DGR + VN A R
Sbjct: 38 RETGRSRGFGFVTFSSEQEAEAAINSLHEQDLDGRRIKVNLANAR 82
>gi|212722916|ref|NP_001132731.1| uncharacterized protein LOC100194217 [Zea mays]
gi|194695242|gb|ACF81705.1| unknown [Zea mays]
gi|413933459|gb|AFW68010.1| responsive to abscisic acid15 [Zea mays]
Length = 96
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 57/80 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W N LE F+ +G++++++V+ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAEDR 359
++G+ LDGR I VN A+ R
Sbjct: 68 NMNGKELDGRNITVNQAQSR 87
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 48/105 (45%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + +E L F G EI + K VI +
Sbjct: 9 RCFVGGLAWATSNESLENAFASYG--EILDSK------------------------VITD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGFVT S+ A+E + ++DGR +TVN+A R
Sbjct: 43 RETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQSR 87
>gi|344304396|gb|EGW34628.1| hypothetical protein SPAPADRAFT_57674 [Spathaspora passalidarum
NRRL Y-27907]
Length = 414
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%), Gaps = 33/212 (15%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
E E A LFVG L +++D E L FE G V A
Sbjct: 170 ETDEPATLFVGRLSWNIDDEWLKREFEHIGGVIGA------------------------- 204
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA--PRGTQPERA 272
+VI R T +SRG+G+V + AEKA+ +IDGR + ++ + P ++
Sbjct: 205 -RVIMERSTGKSRGYGYVDFDNKDSAEKALVEMQGKEIDGRPINLDMSTGKPHASKSNDR 263
Query: 273 PRVF-----EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
+ F P +++GNL + L ++F +HG V++ R+ +T + +GFG+V
Sbjct: 264 AKQFGDTPSAPSDTLFIGNLSFNAQRDNLFEIFGQHGTVISCRIPTHPDTQQPKGFGYVQ 323
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
SS E A+ AL+G+ ++GRA R++ + R
Sbjct: 324 FSSVDEAKAALEALNGEYIEGRACRLDFSAPR 355
>gi|67924769|ref|ZP_00518171.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|416405804|ref|ZP_11687965.1| RNA-binding region RNP-1 [Crocosphaera watsonii WH 0003]
gi|67853394|gb|EAM48751.1| RNA-binding region RNP-1 (RNA recognition motif) [Crocosphaera
watsonii WH 8501]
gi|357261220|gb|EHJ10516.1| RNA-binding region RNP-1 [Crocosphaera watsonii WH 0003]
Length = 94
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/83 (57%), Positives = 59/83 (71%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNL ++V +A LEQVF+E+G V +++ DRETGR RGFGFV M +ETE AI AL
Sbjct: 3 IYVGNLSYDVTDADLEQVFAEYGTVKRVQLLTDRETGRPRGFGFVEMDTETEEESAIEAL 62
Query: 342 DGQNLDGRAIRVNVAEDRQRRSS 364
DG GRA+RVN A R+ R S
Sbjct: 63 DGAEWMGRALRVNKARPREDRRS 85
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNL YDV L +F + GTV+ +Q++ +R
Sbjct: 3 IYVGNLSYDVTDADLEQVFAEYGTVK--------------------------RVQLLTDR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET R RGFGFV M T E E A+E + GR L VNKA PR
Sbjct: 37 ETGRPRGFGFVEMDTETEEESAIEALDGAEWMGRALRVNKARPR 80
>gi|301087136|gb|ADK60785.1| chloroplast ribonucleoprotein [Arachis diogoi]
Length = 146
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 61/102 (59%), Gaps = 26/102 (25%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
D KLFVGNLP+ VDS +LA LFE AGTVE+ EV I
Sbjct: 67 DLKLFVGNLPFSVDSAQLAELFESAGTVEVVEV--------------------------I 100
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN 260
Y++ + RSRGFGFVTMS++EEAE A + F Y++DGR L VN
Sbjct: 101 YDKMSGRSRGFGFVTMSSIEEAEAAKQQFDGYELDGRALRVN 142
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 11/111 (9%)
Query: 244 VEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEH 303
V +F ++D D +L+ + R F P +++VGNLP+ VD+A+L ++F
Sbjct: 43 VALFSQFDQDEEILS-----------DGDDRSFSPDLKLFVGNLPFSVDSAQLAELFESA 91
Query: 304 GKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVN 354
G V V+YD+ +GRSRGFGFVTMSS E A DG LDGRA+RVN
Sbjct: 92 GTVEVVEVIYDKMSGRSRGFGFVTMSSIEEAEAAKQQFDGYELDGRALRVN 142
>gi|1346181|sp|P49311.1|GRP2_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP2A
gi|496237|gb|AAA59213.1| homology with RNA-binding proteins in meristematic tissue [Sinapis
alba]
Length = 169
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D LE FS+ G++V+++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 YRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ+LDGR+I VN A+
Sbjct: 68 GMNGQDLDGRSITVNEAQ 85
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 26/107 (24%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P + + FVG L + D L F + G E+ + K
Sbjct: 4 PDVEYRCFVGGLAWATDERSLETAFSQFG--ELVDSK----------------------- 38
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+I +RET RSRGFGFVT + + A+E + D+DGR +TVN+A
Sbjct: 39 -IINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEA 84
>gi|255571962|ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 166
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W + LE+ FS +G+V+ ++++ DRETGRSRGFGFVT ++E + DAI
Sbjct: 8 YRCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
++I +RET RSRGFGFVT + + A+E + ++DGR +TVN+A
Sbjct: 38 KIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEA 84
>gi|18076086|emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W + LE+ FS +G+V+ ++++ DRETGRSRGFGFVT ++E + DAI
Sbjct: 8 YRCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
++I +RET RSRGFGFVT + + A+E + ++DGR +TVN+A
Sbjct: 38 KIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNLDGRNITVNEA 84
>gi|108863012|gb|ABG22105.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
Length = 117
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 57/81 (70%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE FS G+++ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
++G+ LDGR I VN A+ R+
Sbjct: 68 GMNGKELDGRNITVNEAQSRR 88
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 26/110 (23%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P + + FVG L + D L F G EI E K
Sbjct: 4 PDVEYRCFVGGLAWATDDRSLEAAFSTFG--EILESK----------------------- 38
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+I +RET RSRGFGFVT S+ + A+E + ++DGR +TVN+A R
Sbjct: 39 -IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 62/83 (74%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+I++G + ++ D+ L++ F ++G VV AR++ DR+TGRSRGFGFVT +S E + AI A
Sbjct: 41 KIFIGGISFQTDDNGLKEAFDKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEASSAIQA 100
Query: 341 LDGQNLDGRAIRVNVAEDRQRRS 363
+DGQ+L GR +RVN A +R +R+
Sbjct: 101 MDGQDLHGRRVRVNYATERPQRT 123
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 29/112 (25%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+K+F+G + + D L F+K G V A ++I
Sbjct: 40 SKIFIGGISFQTDDNGLKEAFDKYGNVVEA--------------------------RIIM 73
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+R+T RSRGFGFVT ++ EEA A++ D+ GR + VN A R P+R
Sbjct: 74 DRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDLHGRRVRVNYATER---PQR 122
>gi|226505736|ref|NP_001150149.1| LOC100283778 [Zea mays]
gi|195605606|gb|ACG24633.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195606158|gb|ACG24909.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637130|gb|ACG38033.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195645710|gb|ACG42323.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|238009788|gb|ACR35929.1| unknown [Zea mays]
gi|413951537|gb|AFW84186.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 257 LTVNKAAPRGTQPERAPRVFEPG----FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVV 312
L + A G +P VF ++++G L W VD+ +L + FS G+V ARV+
Sbjct: 10 LLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVI 69
Query: 313 YDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
DRETGRSRGFGFV S +AI+A+DG+ +DGR +RVN+A +R
Sbjct: 70 TDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANER 116
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLF+G L + VD KL F G E+ E + VI +
Sbjct: 38 KLFIGGLDWGVDDVKLREAFSSFG--EVTEAR------------------------VITD 71
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGFV S + A++A+ +IDGR + VN A R
Sbjct: 72 RETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANER 116
>gi|351730017|ref|ZP_08947708.1| RNP-1 like RNA-binding protein [Acidovorax radicis N35]
Length = 115
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 59/80 (73%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+IYVGNLP+ V ++ LE FSE G V +A+V+ DRETGRS+GFGFV M+S AI+A
Sbjct: 4 KIYVGNLPYSVTDSVLESNFSEFGNVTSAKVMMDRETGRSKGFGFVEMASAEVAQAAISA 63
Query: 341 LDGQNLDGRAIRVNVAEDRQ 360
L G ++DGR+I VN+A R+
Sbjct: 64 LHGMSVDGRSIVVNLARPRE 83
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+K++VGNLPY V L F + FGN V+ +V+
Sbjct: 3 SKIYVGNLPYSVTDSVLESNFSE--------------FGN------------VTSAKVMM 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RS+GFGFV M++ E A+ A+ H +DGR + VN A PR
Sbjct: 37 DRETGRSKGFGFVEMASAEVAQAAISALHGMSVDGRSIVVNLARPR 82
>gi|357152187|ref|XP_003576037.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 102
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 60/83 (72%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE F G++++A+V+ DRETGRSRGFGFVT ++E + +AI
Sbjct: 4 YRCFVGGLAWVTDDQSLENAFRSFGEILDAKVIPDRETGRSRGFGFVTFTTEQAMQNAIN 63
Query: 340 ALDGQNLDGRAIRVNVAEDRQRR 362
A++G+++DGR I VN+A+ R R
Sbjct: 64 AMNGKDIDGRTISVNMAQARNNR 86
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 50/108 (46%), Gaps = 26/108 (24%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E+ + FVG L + D + L F G EI + K V
Sbjct: 2 EEYRCFVGGLAWVTDDQSLENAFRSFG--EILDAK------------------------V 35
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
I +RET RSRGFGFVT +T + + A+ + DIDGR ++VN A R
Sbjct: 36 IPDRETGRSRGFGFVTFTTEQAMQNAINAMNGKDIDGRTISVNMAQAR 83
>gi|125563035|gb|EAZ08415.1| hypothetical protein OsI_30679 [Oryza sativa Indica Group]
Length = 226
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 102/206 (49%), Gaps = 43/206 (20%)
Query: 154 VEPPEDA---KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
+E PE+ KL+VGN+P V +++LA +F GTVE AEV F
Sbjct: 61 LEAPEEVAARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMF----------------- 103
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 270
++ T RSR FGFVTMST EEA A+E + ++ GR + VN +
Sbjct: 104 ---------DKYTGRSRRFGFVTMSTPEEANAAIESLNETEVGGRKIKVNVTESFLPNID 154
Query: 271 RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
R+ EP F VD+ Q G+V++A V T +S+G+GFVT SS
Sbjct: 155 RSAPEPEPVF----------VDS----QYRFTLGEVLSATVSRIPGTAKSKGYGFVTFSS 200
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVA 356
E E+ A++ + L+G+ IRVN A
Sbjct: 201 EEEVEAAVSTFNNAELEGQPIRVNKA 226
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGN+P V N L +F++HG V A V++D+ TGRSR FGFVTMS+ E N AI +
Sbjct: 71 KLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEANAAIES 130
Query: 341 LDGQNLDGRAIRVNVAED 358
L+ + GR I+VNV E
Sbjct: 131 LNETEVGGRKIKVNVTES 148
>gi|125536731|gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indica Group]
Length = 257
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 57/79 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L + D L F+ +G+V+ A+++ DRETGRSRGFGF+T +S E + AI A
Sbjct: 32 KLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASAAITA 91
Query: 341 LDGQNLDGRAIRVNVAEDR 359
LDG++LDGR IRVN A +R
Sbjct: 92 LDGKDLDGRNIRVNTANER 110
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLFVG L Y D + L F G ++ E K +I
Sbjct: 31 SKLFVGGLSYGTDEQSLRDTFANYG--QVIEAK------------------------IIN 64
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RSRGFGF+T ++ EEA A+ D+DGR + VN A R
Sbjct: 65 DRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNTANER 110
>gi|116783558|gb|ABK22994.1| unknown [Picea sitchensis]
Length = 157
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 64/96 (66%), Gaps = 9/96 (9%)
Query: 273 PRVFEPGF---------RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGF 323
P V+ P +++VG L + VD+ L + F+ G V+ A+++ DRETGRSRGF
Sbjct: 23 PSVYMPAIYSAFRCMSSKVFVGGLSYGVDDQTLRESFATFGDVMEAKIINDRETGRSRGF 82
Query: 324 GFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
GFVT +S E N A+ A+DG++L GR+IRVN+A++R
Sbjct: 83 GFVTFASPDEANAAVEAMDGKDLQGRSIRVNIAQER 118
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 49/106 (46%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+K+FVG L Y VD + L F G V A ++I
Sbjct: 39 SKVFVGGLSYGVDDQTLRESFATFGDVMEA--------------------------KIIN 72
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RSRGFGFVT ++ +EA AVE D+ GR + VN A R
Sbjct: 73 DRETGRSRGFGFVTFASPDEANAAVEAMDGKDLQGRSIRVNIAQER 118
>gi|357473263|ref|XP_003606916.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507971|gb|AES89113.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 190
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LEQ FS+ G++ +++V+ DRETGRSRGFGFVT + E + DAI
Sbjct: 8 YRCFVGGLAWATDSQALEQAFSKFGEITDSKVINDRETGRSRGFGFVTFAEEKSMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ++DGR I VN A+
Sbjct: 68 EMNGQDIDGRNITVNEAQ 85
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + DS+ L F K G EI + K VI +
Sbjct: 9 RCFVGGLAWATDSQALEQAFSKFG--EITDSK------------------------VIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + + A+E + DIDGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFAEEKSMRDAIEEMNGQDIDGRNITVNEA 84
>gi|195123564|ref|XP_002006275.1| GI18654 [Drosophila mojavensis]
gi|193911343|gb|EDW10210.1| GI18654 [Drosophila mojavensis]
Length = 645
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 104/222 (46%), Gaps = 43/222 (19%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
E AKLF V N D D EKL FE G + +V
Sbjct: 177 EKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKV---------------------- 214
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERA 272
++E +S+GFGFV T E AE AV+ + D+ DG+ L V +A + + +
Sbjct: 215 -----MSKEDGKSKGFGFVAYETTEAAEAAVQALNGKDMGDGKTLYVARAQKKAERQQEL 269
Query: 273 PRVFEP----------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
R FE G +YV NL +D+ RL + FS +G + +A+V+ D E GRS+G
Sbjct: 270 KRKFEELKKKRHESVFGVNLYVKNLDDSIDDERLRKEFSLYGTITSAKVMTDEE-GRSKG 328
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
FGFV S E A+ L+G+ + + + V +A+ ++ R +
Sbjct: 329 FGFVCFISPNEATCAVTELNGRVIGSKPLYVALAQRKEERKA 370
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 77/142 (54%), Gaps = 2/142 (1%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
E S+G+GFV T E A +++ + ++G+ + V K PR + + +
Sbjct: 125 EKGTSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTN 184
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YV N + D+ +L++ F +GK+ + +V+ +E G+S+GFGFV + A+ AL
Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAYETTEAAEAAVQAL 243
Query: 342 DGQNL-DGRAIRVNVAEDRQRR 362
+G+++ DG+ + V A+ + R
Sbjct: 244 NGKDMGDGKTLYVARAQKKAER 265
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 35/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L D++ L F AG V + VC
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSSAGPV---------------LSIRVC-----------R 35
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ +V +AE+A++ + +D+ + R +R P + G
Sbjct: 36 DVVTRRSLGYAYVNFQQPADAERALDTMN-FDL------IRDKPIRIMWSQRDPSLRRSG 88
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN + FS G +++ +V D E G S+G+GFV +E N +I
Sbjct: 89 VGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATD-EKGTSKGYGFVHFETEEAANTSI 147
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+G+ + V R+ R
Sbjct: 148 DKVNGMLLNGKKVYVGKFIPRKER 171
>gi|399931797|gb|AFP57448.1| RNA-binding glycine-rich protein [Nicotiana clevelandii]
Length = 144
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 64/106 (60%)
Query: 257 LTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRE 316
++ N + T P V +++VG L W D+ L F+ G VV+ARV+ DR+
Sbjct: 15 ISGNAVSATSTMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRD 74
Query: 317 TGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
+GRSRGFGFV S + N+AI A+DGQ L GR IRV++A++R R
Sbjct: 75 SGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQERAPR 120
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 49/114 (42%), Gaps = 32/114 (28%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG L + D + L F G V A +VI +
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDA--------------------------RVIVD 72
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
R++ RSRGFGFV S E A +A++ ++ GR + V+ A ERAPR
Sbjct: 73 RDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIA------QERAPR 120
>gi|326487468|dbj|BAJ89718.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510625|dbj|BAJ87529.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518508|dbj|BAJ88283.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520529|dbj|BAK07523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527353|dbj|BAK04618.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 161
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 58/78 (74%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L+ FS++G V++++++ DRETGRSRGFGFVT +S+ + AI
Sbjct: 6 YRCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 65
Query: 340 ALDGQNLDGRAIRVNVAE 357
A++GQ+LDGR I VN A+
Sbjct: 66 AMNGQDLDGRNITVNEAQ 83
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D + L F K G V + ++I +
Sbjct: 7 RCFVGGLAWATDDQSLQNAFSKYGDVIDS--------------------------KIITD 40
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT ++ E +A+E + D+DGR +TVN+A
Sbjct: 41 RETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEA 82
>gi|114145394|dbj|BAF30986.1| glycine-rich RNA-binding protein [Triticum aestivum]
Length = 163
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 58/78 (74%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L+ FS++G V++++++ DRETGRSRGFGFVT +S+ + AI
Sbjct: 6 YRCFVGGLAWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 65
Query: 340 ALDGQNLDGRAIRVNVAE 357
A++GQ+LDGR I VN A+
Sbjct: 66 AMNGQDLDGRNITVNEAQ 83
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D + L F K G V + ++I +
Sbjct: 7 RCFVGGLAWATDDQSLQNAFSKYGDVIDS--------------------------KIITD 40
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT ++ E +A+E + D+DGR +TVN+A
Sbjct: 41 RETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEA 82
>gi|2624326|emb|CAA05728.1| OsGRP1 [Oryza sativa Japonica Group]
Length = 160
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 57/81 (70%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE FS G+++ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
++G+ LDGR I VN A+ R+
Sbjct: 68 GMNGKELDGRNITVNEAQSRR 88
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 26/110 (23%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P + + FVG L + D L F G EI E K
Sbjct: 4 PDVEYRCFVGGLAWATDDRSLEAAFSTFG--EILESK----------------------- 38
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+I +RET RSRGFGFVT S+ + A+E + ++DGR +TVN+A R
Sbjct: 39 -IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|76160980|gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
gi|76160996|gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 150
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 65/106 (61%)
Query: 258 TVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRET 317
T N A+ P + R++VG L W D+ L++ F+ G VV+A+V+ DR++
Sbjct: 17 TGNAASANSPTPAMLNAIRCMSSRLFVGGLSWGTDDQSLKEAFTSFGDVVDAKVIIDRDS 76
Query: 318 GRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRS 363
GRSRGFGFV S E +A+ A+DGQ L GR IRVN+A++R RS
Sbjct: 77 GRSRGFGFVNFSDEDCAKEAMNAMDGQQLHGRNIRVNLAQERAPRS 122
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 32/115 (27%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
++LFVG L + D + L F G V A +VI
Sbjct: 39 SRLFVGGLSWGTDDQSLKEAFTSFGDVVDA--------------------------KVII 72
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
+R++ RSRGFGFV S + A++A+ + GR + VN A ERAPR
Sbjct: 73 DRDSGRSRGFGFVNFSDEDCAKEAMNAMDGQQLHGRNIRVNLA------QERAPR 121
>gi|408398205|gb|EKJ77338.1| hypothetical protein FPSE_02416 [Fusarium pseudograminearum CS3096]
Length = 128
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 57/79 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W + L Q FSE G+V ++ ++ DRETGR+RGFGFVT S+E + N A+ A
Sbjct: 3 KLYVGNLSWNTTDDTLRQTFSEFGEVTDSIIMRDRETGRARGFGFVTFSTEEQANAAVDA 62
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L+ Q LDGR IRVNVA R
Sbjct: 63 LNEQELDGRRIRVNVANAR 81
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KL+VGNL ++ + L F + G V + ++
Sbjct: 2 SKLYVGNLSWNTTDDTLRQTFSEFGEVTDS--------------------------IIMR 35
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET R+RGFGFVT ST E+A AV+ + ++DGR + VN A R
Sbjct: 36 DRETGRARGFGFVTFSTEEQANAAVDALNEQELDGRRIRVNVANAR 81
>gi|195642478|gb|ACG40707.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 153
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 65/107 (60%), Gaps = 4/107 (3%)
Query: 257 LTVNKAAPRGTQPERAPRVFEPG----FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVV 312
L + A G +P VF ++++G L W VD+ +L + FS G+V ARV+
Sbjct: 10 LLRHSALVSGITGGSSPAVFNAARLMSTKLFIGGLDWGVDDVKLREAFSSFGEVTEARVI 69
Query: 313 YDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
DRETGRSRGFGFV S +AI+A+DG+ +DGR +RVN+A +R
Sbjct: 70 TDRETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANER 116
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLF+G L + VD KL F G E+ E + VI +
Sbjct: 38 KLFIGGLDWGVDDVKLREAFSSFG--EVTEAR------------------------VITD 71
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGFV S + A++A+ +IDGR + VN A R
Sbjct: 72 RETGRSRGFGFVNYSDSDAAKEAISAMDGKEIDGRQVRVNMANER 116
>gi|413941709|gb|AFW74358.1| hypothetical protein ZEAMMB73_309849 [Zea mays]
Length = 826
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 123/273 (45%), Gaps = 54/273 (19%)
Query: 103 EEEPNWENQGADETE---GNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPED 159
+ E + ++ DE E GN G GED +AGE + SG + P
Sbjct: 595 DAEAGFSDEAEDEQEWSGGN----GAARGEDLGADAGE--DLSGWARQW--------PRP 640
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+LFV NLP D + L LF GTV E+
Sbjct: 641 RELFVCNLPRRCDVQDLLELFTPHGTVLSVEIS--------------------------R 674
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA------- 272
+ E+ SRG VTM ++ EA A++ +D+DGR + V A+ + +
Sbjct: 675 DAESGISRGTASVTMRSLAEARAAIDALDGFDMDGREVFVKLASDVISNRKNVNLAHITP 734
Query: 273 --PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
+FE ++YVGNL W V L ++F++ G VV+ R++ DR+ GR+R +GF++ SS
Sbjct: 735 TKDHIFETPHKVYVGNLAWSVQPQDLRELFTQCGTVVSTRLLTDRKGGRNRVYGFLSFSS 794
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAE-DRQRR 362
EL +A+ LD GR I V A +RQ R
Sbjct: 795 AQELEEAL-KLDRTVFFGRDIVVKEAHVERQTR 826
>gi|108710322|gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 153
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE FS +G++++++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 GMNGKELDGRNITVNEAQ 85
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 26/107 (24%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P + + FVG L + D L F G EI + K
Sbjct: 4 PDVEYRCFVGGLAWATDDRSLEAAFSTYG--EILDSK----------------------- 38
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+I +RET RSRGFGFVT S+ + A+E + ++DGR +TVN+A
Sbjct: 39 -IINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVNEA 84
>gi|50881454|gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa Japonica
Group]
gi|108710320|gb|ABF98115.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|154550663|gb|ABS83497.1| receptor-like serine threonine kinase [Oryza sativa Japonica Group]
gi|169244423|gb|ACA50485.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|215697732|dbj|BAG91726.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415943|gb|ADM86846.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
Length = 162
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 57/78 (73%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE FS +G++++++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 GMNGKELDGRNITVNEAQ 85
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 26/107 (24%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P + + FVG L + D L F G EI + K
Sbjct: 4 PDVEYRCFVGGLAWATDDRSLEAAFSTYG--EILDSK----------------------- 38
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+I +RET RSRGFGFVT S+ + A+E + ++DGR +TVN+A
Sbjct: 39 -IINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVNEA 84
>gi|403215569|emb|CCK70068.1| hypothetical protein KNAG_0D03220 [Kazachstania naganishii CBS
8797]
Length = 399
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 33/209 (15%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E A LFVG L + VD E L F G V A +V
Sbjct: 147 EPATLFVGRLSWSVDDEWLKNEFAPIGGVVSA--------------------------RV 180
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR---GTQPERAPR 274
I R TDRSRG+G+V + AEKA++ +IDGR + V+ + + G +RA +
Sbjct: 181 IMERGTDRSRGYGYVDFEDISYAEKALKEMQGKEIDGRPINVDMSTSKPAGGASNDRAKK 240
Query: 275 V----FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
EP +++GNL ++ D L ++F + G++++ R+ ET + +GFG+V ++
Sbjct: 241 FGDVPSEPSDTLFLGNLSFDADRDNLYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTN 300
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDR 359
+ A+ AL G++++ R +R++ + R
Sbjct: 301 TEDAKKALDALQGESINDRPVRLDFSTPR 329
>gi|406602740|emb|CCH45698.1| Nuclear localization sequence-binding protein [Wickerhamomyces
ciferrii]
Length = 467
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 104/211 (49%), Gaps = 35/211 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E A LFVG L + +D E L FE G V A +V
Sbjct: 233 EPATLFVGRLSWSIDDEWLKREFEPLGGVISA--------------------------RV 266
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-----APRGTQPERA 272
I+ R T +SRG+G+V + AEKA++ + +IDGR + ++ + A +RA
Sbjct: 267 IFERATGKSRGYGYVDFDSKSAAEKALKEYQGREIDGRPINLDMSTGKPHASNNRSNDRA 326
Query: 273 PRVFE----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
+ + P +++GNL + + L +VFSE+G +V+ R+ +T + +GFG+V
Sbjct: 327 SKFGDTPSAPSDTLFLGNLSFNANRDNLSEVFSEYGSIVSVRIPTHPDTEQPKGFGYVQY 386
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
S E A+ AL+G+ ++GR +R++ + R
Sbjct: 387 GSVDEAKAALEALNGEYIEGRPVRLDFSAPR 417
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 55/88 (62%)
Query: 269 PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
P + +V E ++VG L W +D+ L++ F G V++ARV+++R TG+SRG+G+V
Sbjct: 224 PAKKQKVDEEPATLFVGRLSWSIDDEWLKREFEPLGGVISARVIFERATGKSRGYGYVDF 283
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVA 356
S++ A+ G+ +DGR I ++++
Sbjct: 284 DSKSAAEKALKEYQGREIDGRPINLDMS 311
>gi|115488680|ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|77555842|gb|ABA98638.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649334|dbj|BAF29846.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|125579440|gb|EAZ20586.1| hypothetical protein OsJ_36195 [Oryza sativa Japonica Group]
gi|215694288|dbj|BAG89281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708787|dbj|BAG94056.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 258
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 57/79 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L + D L F+ +G+V+ A+++ DRETGRSRGFGF+T +S E + AI A
Sbjct: 32 KLFVGGLSYGTDEQSLRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASAAITA 91
Query: 341 LDGQNLDGRAIRVNVAEDR 359
LDG++LDGR IRVN A +R
Sbjct: 92 LDGKDLDGRNIRVNTANER 110
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLFVG L Y D + L F G ++ E K +I
Sbjct: 31 SKLFVGGLSYGTDEQSLRDTFANYG--QVIEAK------------------------IIN 64
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RSRGFGF+T ++ EEA A+ D+DGR + VN A R
Sbjct: 65 DRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNTANER 110
>gi|90265701|dbj|BAE91897.1| glycine-rich RNA-binding protein [Lolium perenne]
Length = 107
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 56/78 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W ++ LEQ FS+ G++ + +++ DRETGRSRGFGFVT SS + +AI
Sbjct: 5 YRCFVGGLAWATNDQSLEQAFSQFGEITDCKIINDRETGRSRGFGFVTFSSSESMKNAIE 64
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ+LDGR I VN A+
Sbjct: 65 GMNGQDLDGRNITVNEAQ 82
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 26/106 (24%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
E+ + FVG L + + + L F + G EI + K
Sbjct: 2 AEEYRCFVGGLAWATNDQSLEQAFSQFG--EITDCK------------------------ 35
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+I +RET RSRGFGFVT S+ E + A+E + D+DGR +TVN+A
Sbjct: 36 IINDRETGRSRGFGFVTFSSSESMKNAIEGMNGQDLDGRNITVNEA 81
>gi|311698159|gb|ADQ00374.1| glycine-rich RNA-binding protein [Sequoia sempervirens]
Length = 194
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 55/80 (68%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W D+ L FS G+V+ +++V DRETGRSRGFGFVT S E + DAI
Sbjct: 8 FRCFVGGLAWATDDRSLHDAFSPFGEVLESKIVSDRETGRSRGFGFVTFSDEQAMMDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAEDR 359
A++G+ LDGR I VN A+ R
Sbjct: 68 AMNGKELDGRNITVNQAQSR 87
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F G E+ E K ++ +
Sbjct: 9 RCFVGGLAWATDDRSLHDAFSPFG--EVLESK------------------------IVSD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGFVT S + A+E + ++DGR +TVN+A R
Sbjct: 43 RETGRSRGFGFVTFSDEQAMMDAIEAMNGKELDGRNITVNQAQSR 87
>gi|115489714|ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|77557139|gb|ABA99935.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
gi|113649851|dbj|BAF30363.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|125580173|gb|EAZ21319.1| hypothetical protein OsJ_36973 [Oryza sativa Japonica Group]
gi|215769456|dbj|BAH01685.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 162
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 57/81 (70%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE FS G+++ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
++G+ LDGR I VN A+ R+
Sbjct: 68 GMNGKELDGRNITVNEAQSRR 88
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 26/110 (23%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P + + FVG L + D L F G EI E K
Sbjct: 4 PDVEYRCFVGGLAWATDDRSLEAAFSTFG--EILESK----------------------- 38
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+I +RET RSRGFGFVT S+ + A+E + ++DGR +TVN+A R
Sbjct: 39 -IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSR 87
>gi|300121123|emb|CBK21504.2| unnamed protein product [Blastocystis hominis]
Length = 302
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 38/204 (18%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K+ V LP+ D L F++ G EI + + V+ N
Sbjct: 5 KVIVLGLPFSCDDSALYDYFQECG--EITDSR------------------------VMVN 38
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER--------- 271
RE +SRGFGFVT ++ A+E + + DGR + V KA R + ++
Sbjct: 39 RENKKSRGFGFVTFASEAAFNNALEK-NGAEFDGRTIKVEKATERPKRDQKENKDRPQHE 97
Query: 272 --APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
AP+ F +I + +L W V++ L Q FS++G + V+ DR++G+SRG G V +
Sbjct: 98 QAAPKEFIDTNKIIITSLAWSVNDDSLRQAFSKYGNLEECTVLKDRQSGKSRGRGIVRFA 157
Query: 330 SETELNDAIAALDGQNLDGRAIRV 353
+E + AI ++G L+GRAI V
Sbjct: 158 TEEAMKKAIEEMNGTELEGRAIAV 181
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++ V LP+ D++ L F E G++ ++RV+ +RE +SRGFGFVT +SE N+A+
Sbjct: 5 KVIVLGLPFSCDDSALYDYFQECGEITDSRVMVNRENKKSRGFGFVTFASEAAFNNALEK 64
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
+G DGR I+V A +R +R
Sbjct: 65 -NGAEFDGRTIKVEKATERPKR 85
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 26/112 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K+ + +L + V+ + L F K G +E C V + +
Sbjct: 109 KIIITSLAWSVNDDSLRQAFSKYGNLE------------------ECTV--------LKD 142
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 272
R++ +SRG G V +T E +KA+E + +++GR + V + P+ E+A
Sbjct: 143 RQSGKSRGRGIVRFATEEAMKKAIEEMNGTELEGRAIAVRQFLPKSQMAEKA 194
>gi|168037600|ref|XP_001771291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677380|gb|EDQ63851.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 87
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 55/80 (68%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W + RLEQ F G V+ ++V+ DRETGRSRGFGF+T + E +N+AI
Sbjct: 2 FRCFVGGLAWATTDDRLEQAFRPFGDVIQSKVISDRETGRSRGFGFITFADENAMNEAIK 61
Query: 340 ALDGQNLDGRAIRVNVAEDR 359
++G+ LDGR I VN A+ R
Sbjct: 62 EMNGKELDGRNITVNQAQSR 81
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+VI +RET RSRGFGF+T + +A++ + ++DGR +TVN+A R
Sbjct: 32 KVISDRETGRSRGFGFITFADENAMNEAIKEMNGKELDGRNITVNQAQSR 81
>gi|121595278|ref|YP_987174.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|222111562|ref|YP_002553826.1| rnp-1 like RNA-binding protein [Acidovorax ebreus TPSY]
gi|120607358|gb|ABM43098.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|221731006|gb|ACM33826.1| RNP-1 like RNA-binding protein [Acidovorax ebreus TPSY]
Length = 102
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 62/85 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R+YVGNL + V + L Q FS+ G V +A+V+ +R+TGRS+GFGFV M S++E DAI
Sbjct: 4 RLYVGNLAYSVRDESLHQQFSQFGSVTSAKVMMERDTGRSKGFGFVEMGSDSEAQDAING 63
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSSF 365
L+G+++DGRA+ VNVA + R SF
Sbjct: 64 LNGRSVDGRALTVNVARPMEARPSF 88
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 54/121 (44%), Gaps = 26/121 (21%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+L+VGNL Y V E L F + G+V A +V+
Sbjct: 4 RLYVGNLAYSVRDESLHQQFSQFGSVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF 280
R+T RS+GFGFV M + EA+ A+ + +DGR LTVN A P +P G+
Sbjct: 38 RDTGRSKGFGFVEMGSDSEAQDAINGLNGRSVDGRALTVNVARPMEARPSFGGGADRGGY 97
Query: 281 R 281
R
Sbjct: 98 R 98
>gi|242078001|ref|XP_002443769.1| hypothetical protein SORBIDRAFT_07g001610 [Sorghum bicolor]
gi|241940119|gb|EES13264.1| hypothetical protein SORBIDRAFT_07g001610 [Sorghum bicolor]
Length = 308
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 116/263 (44%), Gaps = 38/263 (14%)
Query: 111 QGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEP-PEDAKLFVGNLPY 169
+G + E SD E E E R E+ G + + + P +LFV NLP
Sbjct: 73 RGLSDAEAGFSDEAEDEQEWAGGNGAARGEDLGADAGEDLSGWARQWPRPRELFVCNLPR 132
Query: 170 DVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGF 229
D + L LF GTV E+ + ET SRG
Sbjct: 133 RCDVQDLLQLFTPHGTVLSVEIS--------------------------RDAETGISRGT 166
Query: 230 GFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA---------PRVFEPGF 280
FVTM ++ EA A+ +++DGR + V A+ + + +FE
Sbjct: 167 AFVTMRSLAEARTAINALDGFELDGREVFVKLASDVISNRKNVNLAHITPMKDHIFESPH 226
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W V L ++F++ G VV+ R++ DR+ GR+R +GF++ SS EL A+
Sbjct: 227 KVYVGNLAWSVQPQDLRELFTQCGTVVSTRLLTDRKGGRNRVYGFLSFSSAEELEAAL-K 285
Query: 341 LDGQNLDGRAIRVNVA-EDRQRR 362
LD GR I V A +RQ R
Sbjct: 286 LDRTVFFGRDIVVKEAIVERQTR 308
>gi|67471742|ref|XP_651783.1| enhancer binding protein-1 [Entamoeba histolytica HM-1:IMSS]
gi|56468563|gb|EAL46397.1| enhancer binding protein-1 [Entamoeba histolytica HM-1:IMSS]
gi|449709038|gb|EMD48384.1| enhancer binding protein, putative [Entamoeba histolytica KU27]
Length = 306
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 32/209 (15%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
D LF+ NLP+ + EKL +F K G VEI +K H GN
Sbjct: 112 DNMLFIKNLPFAITEEKLKEMFSKFGVVEITLIKTHRKKGN------------------- 152
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP 278
++ G F+T+ T EE +KA+ + ++++GR +TV A + + + EP
Sbjct: 153 ----VTKNNGIAFITVKTAEEQKKAIAEMNNFEVEGRKITVAAAYKKVENKQTTKKTNEP 208
Query: 279 G----FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVV--YDRETG--RSRGFGFVTMSS 330
++V NLP+ + + +++F ++ VV A +V ++++ RS+G+GFVT +
Sbjct: 209 KSLSETNVFVKNLPFTLTDEGFKKLFEKYD-VVEATIVKRHNKKLNVDRSKGYGFVTFKT 267
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDR 359
+ AIA +D ++GR I V A R
Sbjct: 268 AEQQKKAIAEMDNFEVEGRKITVTSAYQR 296
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 28/156 (17%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR-GTQPERAPRVFEPGFR--- 281
SRGF F+ +T +EAEKA+EM R+ I + V KA P+ T ER ++ GF+
Sbjct: 40 SRGFAFIEFATPQEAEKALEM-DRHTIGKMEIKVQKALPKEETTTER--KMNRRGFKGKR 96
Query: 282 ------------------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG---RS 320
+++ NLP+ + +L+++FS+ G V + R+ G ++
Sbjct: 97 NTRKRHLVKRTNEVTDNMLFIKNLPFAITEEKLKEMFSKFGVVEITLIKTHRKKGNVTKN 156
Query: 321 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
G F+T+ + E AIA ++ ++GR I V A
Sbjct: 157 NGIAFITVKTAEEQKKAIAEMNNFEVEGRKITVAAA 192
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 23/109 (21%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FV NLP+ + E LFEK VE VK H N+ ++
Sbjct: 216 VFVKNLPFTLTDEGFKKLFEKYDVVEATIVKRH----NKKLNV----------------- 254
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 270
DRS+G+GFVT T E+ +KA+ ++++GR +TV A R + E
Sbjct: 255 --DRSKGYGFVTFKTAEQQKKAIAEMDNFEVEGRKITVTSAYQRAEKKE 301
>gi|387861093|gb|AFK08576.1| glycine-rich RNA binding protein 2a [Camelina sativa]
gi|387861099|gb|AFK08579.1| glycine-rich RNA binding protein 2a [Camelina sativa]
Length = 160
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W D+ L F+ G+VV+A+V+ DRETGRSRGFGFV S ET + AI+
Sbjct: 37 KLFVGGLSWGTDDQSLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFSDETAASAAISE 96
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG++L+GR IRVN A DR
Sbjct: 97 MDGKDLNGRNIRVNQANDR 115
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 47/110 (42%), Gaps = 26/110 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG L + D + L F G E+ + K VI +
Sbjct: 37 KLFVGGLSWGTDDQSLRDAFAHFG--EVVDAK------------------------VIVD 70
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 270
RET RSRGFGFV S A A+ D++GR + VN+A R + P
Sbjct: 71 RETGRSRGFGFVNFSDETAASAAISEMDGKDLNGRNIRVNQANDRPSAPR 120
>gi|323348433|gb|EGA82678.1| Nsr1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 254
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 86/150 (57%), Gaps = 7/150 (4%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA--PRGTQPERAP 273
+VIY R TDRSRG+G+V AEKA++ +IDGR + + + P G +RA
Sbjct: 38 RVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSKPAGNN-DRAK 96
Query: 274 RV----FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
+ EP +++GNL + D + ++F++HG+VV+ R+ ET + +GFG+V S
Sbjct: 97 KFGDTPSEPSDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFS 156
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAEDR 359
+ + A+ AL G+ +D R +R++ + R
Sbjct: 157 NMEDAKKALDALQGEYIDNRPVRLDFSSPR 186
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%)
Query: 289 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 348
W +D+ L++ F G V+ ARV+Y+R T RSRG+G+V +++ AI + G+ +DG
Sbjct: 17 WSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDG 76
Query: 349 RAIRVNVA 356
R I +++
Sbjct: 77 RPINCDMS 84
>gi|315046452|ref|XP_003172601.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
gi|311342987|gb|EFR02190.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
Length = 481
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 105/213 (49%), Gaps = 38/213 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF GNL ++VD E L FE+ F L G + ++
Sbjct: 238 ANLFAGNLSWNVDEEWLRSEFEE----------FGELVGTR----------------IVT 271
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN--------KAAPRGTQPER 271
+RE+ RSRGFG+V + VE+A KA ++DGR L ++ A PR R
Sbjct: 272 DRESGRSRGFGYVEFANVEDAVKAHAAKKDVELDGRKLNLDFANARANGNANPRERADNR 331
Query: 272 AP----RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
A + +++GN+ + D + ++++FS++G + R+ D E+GR +GFG+V
Sbjct: 332 AKSFGDQTSPESDTLFIGNISFSADESMVQELFSKYGSIQGIRLPTDPESGRPKGFGYVQ 391
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
SS E A+ A G +L GR+IR++ + +Q
Sbjct: 392 FSSVDEARAAMEAEHGADLGGRSIRLDYSTPKQ 424
>gi|294897114|ref|XP_002775830.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239882183|gb|EER07646.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 323
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 93/170 (54%), Gaps = 20/170 (11%)
Query: 199 NQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 258
+ GFH + +V V+ ++ T R RGFGFVT ST +E E + + ++G+ +
Sbjct: 91 DDGFHQYFSQFGHVERAIVMTDKMTGRCRGFGFVTYSTTDEVEVVIMKGGPHQLNGKRVD 150
Query: 259 VNKA------------APRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 306
VN++ + R P R R + +++ G L + + RL Q FS++G +
Sbjct: 151 VNRSQDPKDPHRGGWGSDRSGGPSR--RGGDDPMKVFCGGLQSTLSSERLRQHFSQYGNI 208
Query: 307 VNARVVYDRETGRSRGFGFVTMSSETELNDAI-AALDGQNL-DGRAIRVN 354
V+ + DR+TGRS+G+GFVT SE DA+ AA++G N+ DGR +R +
Sbjct: 209 VDCIAMRDRDTGRSKGYGFVTFDSE----DAVAAAINGNNMIDGRWVRTS 254
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG +P + + Q FS+ G V A V+ D+ TGR RGFGFVT S+ E+ I
Sbjct: 79 QLFVGGIPEGITDDGFHQYFSQFGHVERAIVMTDKMTGRCRGFGFVTYSTTDEVEVVIMK 138
Query: 341 LDGQNLDGRAIRVNVAED 358
L+G+ + VN ++D
Sbjct: 139 GGPHQLNGKRVDVNRSQD 156
>gi|366987527|ref|XP_003673530.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
gi|342299393|emb|CCC67147.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
Length = 415
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 32/208 (15%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E A +FVG L + +D E L FE G V A +V
Sbjct: 160 EPATIFVGRLSWSIDDEWLKKEFEHIGGVVSA--------------------------RV 193
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN--KAAPRGTQPERAPRV 275
I R TDRSRG+G+V AEKA++ +IDGR + V+ + P +RA +
Sbjct: 194 IMERGTDRSRGYGYVDFEDKSYAEKAIKEMQGKEIDGREINVDMSTSKPAAGNNDRAKKF 253
Query: 276 ----FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
EP +++GNL + D + ++FS++G++++ R+ ET + +GFG+V ++
Sbjct: 254 GDVPSEPSETLFLGNLSFNADRDAISELFSKYGEIISVRIPTHPETEQPKGFGYVQYTNV 313
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDR 359
+ A+ L G+ +D R +R++ + R
Sbjct: 314 EDAKKALEGLQGEYIDNRPVRLDYSTPR 341
>gi|387861097|gb|AFK08578.1| glycine-rich RNA binding protein 2c [Camelina sativa]
gi|387861103|gb|AFK08581.1| glycine-rich RNA binding protein 2c [Camelina sativa]
Length = 158
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W D+A L F+ G+VV+A+V+ DRETGR RGFGFV S ET + AI+
Sbjct: 37 KLFVGGLSWGTDDASLRDAFAHFGEVVDAKVIVDRETGRPRGFGFVNFSDETAASAAISE 96
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG++L+GR IRVN A DR
Sbjct: 97 MDGKDLNGRNIRVNPANDR 115
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 26/110 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG L + D L F G E+ + K VI +
Sbjct: 37 KLFVGGLSWGTDDASLRDAFAHFG--EVVDAK------------------------VIVD 70
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 270
RET R RGFGFV S A A+ D++GR + VN A R + P
Sbjct: 71 RETGRPRGFGFVNFSDETAASAAISEMDGKDLNGRNIRVNPANDRPSAPR 120
>gi|728594|emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 59/84 (70%)
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
E +R +VG L W D+ L+ FS++G++++A+++ DRETGRSRGFGFVT SE +
Sbjct: 3 ETEYRCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQ 62
Query: 337 AIAALDGQNLDGRAIRVNVAEDRQ 360
AI ++G+ LDGR + VN A+ R+
Sbjct: 63 AIEEMNGKELDGRQVTVNEAQSRR 86
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F + G EI + K +I +
Sbjct: 7 RCFVGGLAWATDDHNLQAAFSQYG--EILDAK------------------------IIND 40
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGFVT + E +A+E + ++DGR +TVN+A R
Sbjct: 41 RETGRSRGFGFVTFGSEESMRQAIEEMNGKELDGRQVTVNEAQSR 85
>gi|2293480|gb|AAB65412.1| glycine-rich protein [Oryza sativa Indica Group]
Length = 161
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE FS +G+++ ++++ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 GMNGKELDGRNITVNEAQ 85
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 26/107 (24%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P + + FVG L + D L F G EI E K
Sbjct: 4 PDVEYRCFVGGLAWATDDRSLEAAFSTYG--EILESK----------------------- 38
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+I +RET RSRGFGFVT S+ + A+E + ++DGR +TVN+A
Sbjct: 39 -IINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEA 84
>gi|195654321|gb|ACG46628.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|238010482|gb|ACR36276.1| unknown [Zea mays]
Length = 252
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 60/79 (75%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG + ++ D+ L F+++G+V+ AR++ DRE+GRSRGFGFVT +S E + AI A
Sbjct: 31 KLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAITA 90
Query: 341 LDGQNLDGRAIRVNVAEDR 359
LDG+ LDGR+IRVN A ++
Sbjct: 91 LDGKTLDGRSIRVNHANEK 109
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 46/103 (44%), Gaps = 26/103 (25%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLFVG + Y D L F K G V A ++I
Sbjct: 30 SKLFVGGISYQTDDHSLRDEFAKYGQVIEA--------------------------RIII 63
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+RE+ RSRGFGFVT ++ EEA A+ +DGR + VN A
Sbjct: 64 DRESGRSRGFGFVTYTSSEEASAAITALDGKTLDGRSIRVNHA 106
>gi|226533248|ref|NP_001149356.1| plastid-specific 30S ribosomal protein 2 [Zea mays]
gi|195626620|gb|ACG35140.1| plastid-specific 30S ribosomal protein 2 [Zea mays]
gi|414884785|tpg|DAA60799.1| TPA: plastid-specific 30S ribosomal protein 2 [Zea mays]
Length = 251
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 105/222 (47%), Gaps = 34/222 (15%)
Query: 126 PEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGT 185
P V G S V E E V KL+VGN+P V +++L +F GT
Sbjct: 38 PAAAPQVSRRGSALRVSASSAVLEAPEAVA---ARKLYVGNIPRTVTNDELRDMFAAHGT 94
Query: 186 VEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVE 245
VE AEV +Y++ T+RSR FGFVTMST EEA AVE
Sbjct: 95 VERAEV--------------------------MYDKYTNRSRRFGFVTMSTAEEANAAVE 128
Query: 246 MFHRYDIDGRLLTVNKA---APR--GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 300
+ ++ R + VN P + PE + +++YVGNL V L+ F
Sbjct: 129 ALNGTEVGDRKIKVNVTESFLPNIDRSAPEPEALFVDSQYKVYVGNLAKTVTTEVLKNFF 188
Query: 301 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 342
SE G +++A V + T +S+G+GFVT SSE E+ A+A +
Sbjct: 189 SEKGNILSATVSHIPGTSKSKGYGFVTFSSEEEVEAAVATFN 230
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 51/78 (65%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGN+P V N L +F+ HG V A V+YD+ T RSR FGFVTMS+ E N A+ A
Sbjct: 70 KLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTAEEANAAVEA 129
Query: 341 LDGQNLDGRAIRVNVAED 358
L+G + R I+VNV E
Sbjct: 130 LNGTEVGDRKIKVNVTES 147
>gi|242083506|ref|XP_002442178.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
gi|241942871|gb|EES16016.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
Length = 250
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 59/79 (74%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L + D+ L F+++G+V+ AR++ DRE+GRSRGFGFVT +S E + AI A
Sbjct: 31 KLFVGGLSYGTDDHSLRDEFAKYGEVIEARIILDRESGRSRGFGFVTYTSSEEASAAITA 90
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG+ LDGR+IRVN A +R
Sbjct: 91 MDGKTLDGRSIRVNHANER 109
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 48/106 (45%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLFVG L Y D L F K G E+ E + +I
Sbjct: 30 SKLFVGGLSYGTDDHSLRDEFAKYG--EVIEAR------------------------IIL 63
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RE+ RSRGFGFVT ++ EEA A+ +DGR + VN A R
Sbjct: 64 DRESGRSRGFGFVTYTSSEEASAAITAMDGKTLDGRSIRVNHANER 109
>gi|395007942|ref|ZP_10391636.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
gi|394314048|gb|EJE51000.1| RRM domain-containing RNA-binding protein [Acidovorax sp. CF316]
Length = 117
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 58/82 (70%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+IYVGNLP+ V ++ LE FSE G V +A+V+ DRETGRS+GFGFV M+S AI
Sbjct: 4 KIYVGNLPYSVTDSTLESNFSEFGNVTSAKVMMDRETGRSKGFGFVEMASAEVAQAAITG 63
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
L G ++DGR+I VN+A R+ R
Sbjct: 64 LHGMSVDGRSIVVNLARPREER 85
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+K++VGNLPY V L F + FGN V+ +V+
Sbjct: 3 SKIYVGNLPYSVTDSTLESNFSE--------------FGN------------VTSAKVMM 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RS+GFGFV M++ E A+ A+ H +DGR + VN A PR
Sbjct: 37 DRETGRSKGFGFVEMASAEVAQAAITGLHGMSVDGRSIVVNLARPR 82
>gi|495594|gb|AAA70421.1| poly(A)-binding protein [Drosophila melanogaster]
Length = 632
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 105/222 (47%), Gaps = 43/222 (19%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
E AKLF V N D D EKL FE G + +V
Sbjct: 175 EKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKV---------------------- 212
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERA 272
++E +S+GFGFV T E AE AV+ + D+ +G+ L V +A + + +
Sbjct: 213 -----MSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQEL 267
Query: 273 PRVFEP----------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
R FE G +YV NL +D+ RL FS +G + +A+V+ D E GRS+G
Sbjct: 268 KRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEE-GRSKG 326
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
FGFV + E+E A+ L+G+ + + + V +A+ ++ R +
Sbjct: 327 FGFVCFNPESEATCAVTELNGRVVGSKPLYVALAQRKEERKA 368
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP--ERAPRVFEPG 279
E S+G+GFV T E A +++ + ++G+ + V K PR Q E+A ++F
Sbjct: 125 EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEQELGEKA-KLFT-- 181
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+YV N + D+ +L++ F +GK+ + +V+ +E G+S+GFGFV + A+
Sbjct: 182 -NVYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQ 239
Query: 340 ALDGQNL-DGRAIRVNVAEDRQRR 362
AL+G+++ +G+++ V A+ + R
Sbjct: 240 ALNGKDMGEGKSLYVARAQKKAER 263
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 35/195 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+LP DV+ L F AG V + VC VI
Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPV---------------LSIRVCR-------DVI- 38
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
T RS G+ +V +AE+A++ + +D+ V R +R P + G
Sbjct: 39 ---TRRSLGYAYVNFQQPADAERALDTMN-FDL------VRNKPIRIMWSQRDPSLRRSG 88
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN + FS G +++ +V D E G S+G+GFV +E N +I
Sbjct: 89 VGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSI 147
Query: 339 AALDGQNLDGRAIRV 353
++G L+G+ + V
Sbjct: 148 DKVNGMLLNGKKVYV 162
>gi|224035665|gb|ACN36908.1| unknown [Zea mays]
Length = 251
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 105/222 (47%), Gaps = 34/222 (15%)
Query: 126 PEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGT 185
P V G S V E E V KL+VGN+P V +++L +F GT
Sbjct: 38 PAAAPQVSRRGSALRVSASSAVLEAPEAVA---ARKLYVGNIPRTVTNDELRDMFAAHGT 94
Query: 186 VEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVE 245
VE AEV +Y++ T+RSR FGFVTMST EEA AVE
Sbjct: 95 VERAEV--------------------------MYDKYTNRSRRFGFVTMSTAEEANAAVE 128
Query: 246 MFHRYDIDGRLLTVNKA---APR--GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF 300
+ ++ R + VN P + PE + +++YVGNL V L+ F
Sbjct: 129 ALNGTEVGDRKIKVNVTESFLPNIDRSAPEPEALFVDSQYKVYVGNLAKTVTTEVLKNFF 188
Query: 301 SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 342
SE G +++A V + T +S+G+GFVT SSE E+ A+A +
Sbjct: 189 SEKGNILSATVSHIPGTSKSKGYGFVTFSSEEEVEAAVATFN 230
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 51/78 (65%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGN+P V N L +F+ HG V A V+YD+ T RSR FGFVTMS+ E N A+ A
Sbjct: 70 KLYVGNIPRTVTNDELRDMFAAHGTVERAEVMYDKYTNRSRRFGFVTMSTAEEANAAVEA 129
Query: 341 LDGQNLDGRAIRVNVAED 358
L+G + R I+VNV E
Sbjct: 130 LNGTEVGDRKIKVNVTES 147
>gi|302507033|ref|XP_003015473.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
gi|291179045|gb|EFE34833.1| hypothetical protein ARB_06599 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 108/221 (48%), Gaps = 40/221 (18%)
Query: 154 VEPPE--DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFY 211
V+ PE A LFVGNL ++VD E L FE+ F L G +
Sbjct: 230 VDVPEGASANLFVGNLSWNVDEEWLRSEFEE----------FGELAGTR----------- 268
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN--------KAA 263
++ +RE+ RSRGFG+V VE+A KA ++DGR + ++ A
Sbjct: 269 -----IVTDRESGRSRGFGYVEFVNVEDAVKAHTAKKDAELDGRKMNLDYANARTNGNAN 323
Query: 264 PRGTQPERAP----RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGR 319
PR RA + +++GN+ + D ++++FS++G + R+ D E+GR
Sbjct: 324 PRERADNRAKSFGDQTSPESDTLFIGNISFSADENMVQELFSKYGAIQGIRLPTDPESGR 383
Query: 320 SRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
+GFG+V SS E A+ A G +L GR+IR++ + RQ
Sbjct: 384 PKGFGYVQFSSVDEARAALEAEHGADLGGRSIRLDFSTPRQ 424
>gi|212275199|ref|NP_001130054.1| uncharacterized protein LOC100191146 [Zea mays]
gi|194688180|gb|ACF78174.1| unknown [Zea mays]
gi|414878270|tpg|DAA55401.1| TPA: glycine-rich RNA-binding protein 7 [Zea mays]
Length = 254
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 60/79 (75%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG + ++ D+ L F+++G+V+ AR++ DRE+GRSRGFGFVT +S E + AI A
Sbjct: 31 KLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAITA 90
Query: 341 LDGQNLDGRAIRVNVAEDR 359
LDG+ LDGR+IRVN A ++
Sbjct: 91 LDGKTLDGRSIRVNHANEK 109
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 46/103 (44%), Gaps = 26/103 (25%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLFVG + Y D L F K G V A ++I
Sbjct: 30 SKLFVGGISYQTDDHSLRDEFAKYGQVIEA--------------------------RIII 63
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+RE+ RSRGFGFVT ++ EEA A+ +DGR + VN A
Sbjct: 64 DRESGRSRGFGFVTYTSSEEASAAITALDGKTLDGRSIRVNHA 106
>gi|399886791|gb|AFP52931.1| RBP1 [Hordeum vulgare]
Length = 162
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 58/78 (74%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG+L W D+ LE FS G++++A+++ DRETGRSRGFGFV+ S+E + DAI
Sbjct: 9 YRCFVGSLSWNTDDRGLEAAFSSFGEILDAKIINDRETGRSRGFGFVSFSNEQAMQDAIE 68
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR+I VN A+
Sbjct: 69 GMNGKELDGRSIVVNEAQ 86
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG+L ++ D L F G EI + K +I +
Sbjct: 10 RCFVGSLSWNTDDRGLEAAFSSFG--EILDAK------------------------IIND 43
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFV+ S + + A+E + ++DGR + VN+A
Sbjct: 44 RETGRSRGFGFVSFSNEQAMQDAIEGMNGKELDGRSIVVNEA 85
>gi|320581683|gb|EFW95902.1| Poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 629
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 86/153 (56%), Gaps = 11/153 (7%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP--- 278
E+ +SRGFGFV E+A KAVE + DIDG+ L V +A + + E +E
Sbjct: 263 ESGKSRGFGFVNFEKHEDAVKAVEELNNKDIDGQKLYVGRAQKKSERMESLKHQYEAARQ 322
Query: 279 -------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G+ ++V NL +D+A+LE+ F +G + +A+V+ D + G+S+GFGFV SS
Sbjct: 323 EQLNKYQGYNLFVKNLDDSIDDAKLEEEFKPYGTITSAKVMLD-DAGKSKGFGFVCYSSP 381
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
E AI + + + G+ + V +A+ ++ R S
Sbjct: 382 EEATKAITEMHQRMVAGKPLYVALAQRKEVRRS 414
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
VS ++V + + +S G+ +V + + EKA+E + I G+ A R +R
Sbjct: 73 VSTIRVCRDAVSKQSLGYAYVNFQSHADGEKALEELNYTPIKGK-------ACRIMWSQR 125
Query: 272 APRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
P + G I++ NL +DN L FS GK+++ ++ D E G S+GFGFV
Sbjct: 126 DPSLRRNGSGNIFIKNLHPAIDNKTLHDTFSAFGKILSCKIATD-ENGNSKGFGFVHYEE 184
Query: 331 ETELNDAIAALDGQNLDGRAIRVN---VAEDRQRR 362
AI ++G L+ + V +DRQ +
Sbjct: 185 SESAKAAIENVNGMLLNDHEVYVGPHLAKKDRQSK 219
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVG L V + L +VFS G+V RV D + +S G+ +V S + A+ L
Sbjct: 49 LYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYVNFQSHADGEKALEEL 108
Query: 342 DGQNLDGRAIRV 353
+ + G+A R+
Sbjct: 109 NYTPIKGKACRI 120
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 57/79 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W ++ L++ FS G+V ARV+ DRETGRSRGFGFV S+E + A ++
Sbjct: 38 KLFVGGLSWGTNDGSLKEAFSSFGEVYEARVITDRETGRSRGFGFVEFSNEEDAKKAASS 97
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DGQ LDGR++RVN A +R
Sbjct: 98 MDGQELDGRSVRVNFANER 116
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 45/105 (42%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG L + + L F G V A +VI +
Sbjct: 38 KLFVGGLSWGTNDGSLKEAFSSFGEVYEA--------------------------RVITD 71
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGFV S E+A+KA ++DGR + VN A R
Sbjct: 72 RETGRSRGFGFVEFSNEEDAKKAASSMDGQELDGRSVRVNFANER 116
>gi|226506948|ref|NP_001149776.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195633803|gb|ACG36746.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 276
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 60/79 (75%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG + ++ D+ L F+++G+V+ AR++ DRE+GRSRGFGFVT +S E + AI A
Sbjct: 31 KLFVGGISYQTDDHSLRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAITA 90
Query: 341 LDGQNLDGRAIRVNVAEDR 359
LDG+ LDGR+IRVN A ++
Sbjct: 91 LDGKTLDGRSIRVNHANEK 109
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 46/103 (44%), Gaps = 26/103 (25%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLFVG + Y D L F K G V A ++I
Sbjct: 30 SKLFVGGISYQTDDHSLRDEFAKYGQVIEA--------------------------RIII 63
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+RE+ RSRGFGFVT ++ EEA A+ +DGR + VN A
Sbjct: 64 DRESGRSRGFGFVTYTSSEEASAAITALDGKTLDGRSIRVNHA 106
>gi|112994|sp|P10979.1|GRPA_MAIZE RecName: Full=Glycine-rich RNA-binding, abscisic acid-inducible
protein
gi|22313|emb|CAA31077.1| ABA-inducible gene protein [Zea mays]
gi|195605904|gb|ACG24782.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195617536|gb|ACG30598.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195620254|gb|ACG31957.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637320|gb|ACG38128.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|226091|prf||1410284A abscisic acid inducible gene
Length = 157
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W N LE F+ +G++++++V+ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 NMNGKELDGRNITVNQAQ 85
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + +E L F G EI + K VI +
Sbjct: 9 RCFVGGLAWATSNESLENAFASYG--EILDSK------------------------VITD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT S+ A+E + ++DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQA 84
>gi|413933457|gb|AFW68008.1| responsive to abscisic acid15 [Zea mays]
Length = 159
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W N LE F+ +G++++++V+ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 NMNGKELDGRNITVNQAQ 85
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + +E L F G EI + K VI +
Sbjct: 9 RCFVGGLAWATSNESLENAFASYG--EILDSK------------------------VITD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT S+ A+E + ++DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQA 84
>gi|393217699|gb|EJD03188.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 142
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 58/79 (73%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W + L + FS++G+VV++ V+ DR+TGRSRGFGFVT SSETE AI+A
Sbjct: 4 KVYVGNLSWNTTDDTLRKAFSDYGQVVDSIVMRDRDTGRSRGFGFVTFSSETEATGAISA 63
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L+ Q +GR I+VN A R
Sbjct: 64 LNEQEFEGRRIKVNFANAR 82
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
AK++VGNL ++ + L F G V V ++ V+
Sbjct: 3 AKVYVGNLSWNTTDDTLRKAFSDYGQV-------------------VDSI-------VMR 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+R+T RSRGFGFVT S+ EA A+ + + +GR + VN A R
Sbjct: 37 DRDTGRSRGFGFVTFSSETEATGAISALNEQEFEGRRIKVNFANAR 82
>gi|226491203|ref|NP_001151562.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195647746|gb|ACG43341.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W N LE F+ +G++++++V+ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 NMNGKELDGRNITVNQAQ 85
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + +E L F G EI + K VI +
Sbjct: 9 RCFVGGLAWATSNESLENAFASYG--EILDSK------------------------VITD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT S+ A+E + ++DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQA 84
>gi|195645042|gb|ACG41989.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 142
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W N LE F+ +G++++++V+ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 NMNGKELDGRNITVNQAQ 85
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + +E L F G EI + K VI +
Sbjct: 9 RCFVGGLAWATSNESLENAFASYG--EILDSK------------------------VITD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT S+ A+E + ++DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQA 84
>gi|194700358|gb|ACF84263.1| unknown [Zea mays]
gi|413933458|gb|AFW68009.1| responsive to abscisic acid15 [Zea mays]
Length = 140
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 56/78 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W N LE F+ +G++++++V+ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 NMNGKELDGRNITVNQAQ 85
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + +E L F G EI + K VI +
Sbjct: 9 RCFVGGLAWATSNESLENAFASYG--EILDSK------------------------VITD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT S+ A+E + ++DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQA 84
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 60/81 (74%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L + D + L++ FS++G+V+ ARV+ DRETGRSRGFGF++ S E A+ A
Sbjct: 41 KLFVGGLSYGTDESSLKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEATSAMQA 100
Query: 341 LDGQNLDGRAIRVNVAEDRQR 361
+DGQ+L GR I+VN A +++R
Sbjct: 101 MDGQDLHGRRIKVNYATEKRR 121
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 48/106 (45%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLFVG L Y D L F + G E+ E + VI
Sbjct: 40 SKLFVGGLSYGTDESSLKETFSQYG--EVIEAR------------------------VIL 73
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RSRGFGF++ + EEA A++ D+ GR + VN A +
Sbjct: 74 DRETGRSRGFGFISFPSSEEATSAMQAMDGQDLHGRRIKVNYATEK 119
>gi|544416|sp|Q05966.1|GRP10_BRANA RecName: Full=Glycine-rich RNA-binding protein 10
gi|17819|emb|CAA78513.1| glycine-rich RNA binding protein [Brassica napus]
Length = 169
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 56/78 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W +A LE+ FS+ G+V++++++ DRETGRSRGFGFVT E + DAI
Sbjct: 6 YRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAID 65
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 66 EMNGKELDGRTITVNEAQ 83
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
++I +RET RSRGFGFVT + + A++ + ++DGR +TVN+A
Sbjct: 36 KIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEA 82
>gi|365088445|ref|ZP_09327889.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
gi|363417101|gb|EHL24188.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
Length = 111
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/83 (53%), Positives = 59/83 (71%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+IYVGNLP+ V +A L+ FSE G V +A+V+ DRETGRS+GFGFV M++ AI+
Sbjct: 4 KIYVGNLPYSVTDASLQSNFSEFGGVSSAKVMMDRETGRSKGFGFVEMANAEVAQAAISG 63
Query: 341 LDGQNLDGRAIRVNVAEDRQRRS 363
L G ++DGR I VN+A R+ RS
Sbjct: 64 LHGMSVDGRTIVVNLARPREERS 86
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+K++VGNLPY V L F + G V A +V+
Sbjct: 3 SKIYVGNLPYSVTDASLQSNFSEFGGVSSA--------------------------KVMM 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RS+GFGFV M+ E A+ A+ H +DGR + VN A PR
Sbjct: 37 DRETGRSKGFGFVEMANAEVAQAAISGLHGMSVDGRTIVVNLARPR 82
>gi|15239505|ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
gi|9759450|dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana]
gi|16974556|gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|225879144|dbj|BAH30642.1| hypothetical protein [Arabidopsis thaliana]
gi|332010031|gb|AED97414.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
Length = 309
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 58/79 (73%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G + + +D L + F+++G+VV+ RV+ DRETGRSRGFGFVT +S + AI A
Sbjct: 41 KLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQA 100
Query: 341 LDGQNLDGRAIRVNVAEDR 359
LDG++L GR ++VN A DR
Sbjct: 101 LDGRDLHGRVVKVNYANDR 119
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 26/112 (23%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
+ +KLF+G + Y +D + L F K G E+ + +
Sbjct: 34 IRCMSSSKLFIGGMAYSMDEDSLREAFTKYG--EVVDTR--------------------- 70
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
VI +RET RSRGFGFVT ++ E A A++ D+ GR++ VN A R
Sbjct: 71 ---VILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYANDR 119
>gi|85111281|ref|XP_963862.1| hypothetical protein NCU03092 [Neurospora crassa OR74A]
gi|28925605|gb|EAA34626.1| predicted protein [Neurospora crassa OR74A]
Length = 428
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 107/196 (54%), Gaps = 17/196 (8%)
Query: 181 EKAGTVEIAEVKFHFLFGNQGFHM---WVCAVFY----VSLLQVIYNRETDRSRGFGFVT 233
+KA T E+A+ K GN G+ + + A F +V+ +RE+ RSRGFG+V
Sbjct: 168 KKAKTEEVADDKSTLWVGNLGWGIDDAILLAEFEDCEGAKSARVVTDRESGRSRGFGYVD 227
Query: 234 MSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP-RGTQPE--RAPRVFEPGFRI-------Y 283
+T E+A+KA + ++GR + ++ AA G +P+ A R + G I +
Sbjct: 228 FATNEQAQKAYDAKSGALLEGREMRLDFAAKDAGNKPQDKAANRAAKHGDTISPESDTLF 287
Query: 284 VGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDG 343
VGN+P+ D + + F+ V + R+ D+E+GR +GF +VT +S + +A L+G
Sbjct: 288 VGNMPFSADESVVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSVEDAKNAFEQLNG 347
Query: 344 QNLDGRAIRVNVAEDR 359
+L+GR +R++ A+ R
Sbjct: 348 SDLNGRPVRLDYAKPR 363
>gi|6911146|gb|AAF31404.1|AF200323_1 putative glycine-rich RNA-binding protein 2 [Catharanthus roseus]
Length = 160
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W + L + FS++G+V+ ++V+ DRETGRSRGFGFVT E + DAI
Sbjct: 8 FRCFVGGLAWATTDQSLSEAFSQYGEVLESKVINDRETGRSRGFGFVTFGDEKSMKDAIV 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ LDGR I VN A+
Sbjct: 68 GMNGQTLDGRNITVNEAQ 85
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + + L+ F + G E+ E K VI +
Sbjct: 9 RCFVGGLAWATTDQSLSEAFSQYG--EVLESK------------------------VIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + + A+ + +DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFGDEKSMKDAIVGMNGQTLDGRNITVNEA 84
>gi|1009363|dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris]
Length = 144
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 57/83 (68%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W D+ L F+ G VV+ARV+ DR++GRSRGFGFV S + N+AI A
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKA 98
Query: 341 LDGQNLDGRAIRVNVAEDRQRRS 363
+DGQ L GR IRV +A++R RS
Sbjct: 99 MDGQELQGRNIRVRIAQERAPRS 121
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 32/114 (28%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG L + D + L F G V A +VI +
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDA--------------------------RVIVD 72
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
R++ RSRGFGFV S E A +A++ ++ GR + V A ERAPR
Sbjct: 73 RDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVRIA------QERAPR 120
>gi|212722626|ref|NP_001131649.1| uncharacterized protein LOC100193009 [Zea mays]
gi|194692152|gb|ACF80160.1| unknown [Zea mays]
Length = 314
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 118/263 (44%), Gaps = 38/263 (14%)
Query: 111 QGADETEGNLSDWGEPEGEDTVVEAGERQEESGEEGVFEEEEFVEP-PEDAKLFVGNLPY 169
+G + E SD E E E + R E+ G + + + P +LFV NLP
Sbjct: 79 RGWSDAEAGFSDEAEDEQEWSGGNGAARGEDLGADAGEDLSGWARQWPRPRELFVCNLPR 138
Query: 170 DVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGF 229
D + L LF GTV E+ + E+ SRG
Sbjct: 139 RCDVQDLLELFTPHGTVLSVEIS--------------------------RDAESGISRGT 172
Query: 230 GFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA---------PRVFEPGF 280
VTM ++ EA A++ +D+DGR + V A+ + + +FE
Sbjct: 173 ASVTMRSLAEARAAIDALDGFDMDGREVFVKLASDVISNRKNVNLAHITPTKDHIFETPH 232
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W V L ++F++ G VV+ R++ DR+ GR+R +GF++ SS EL +A+
Sbjct: 233 KVYVGNLAWSVQPQDLRELFTQCGTVVSTRLLTDRKGGRNRVYGFLSFSSAQELEEAL-K 291
Query: 341 LDGQNLDGRAIRVNVAE-DRQRR 362
LD GR I V A +RQ R
Sbjct: 292 LDRTVFFGRDIVVKEAHVERQTR 314
>gi|544426|sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding protein
gi|18347|emb|CAA41152.1| glycine-rich protein [Daucus carota]
gi|445138|prf||1908438A Gly-rich protein
Length = 157
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W ++ LEQ FS+ G + +++++ DRETGRSRGFGFVT E + DAI
Sbjct: 6 YRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIE 65
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ LDGR I VN A+
Sbjct: 66 GMNGQELDGRNITVNEAQ 83
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + + E L F + G + + ++I +
Sbjct: 7 RCFVGGLAWATNDESLEQAFSQFGDITDS--------------------------KIIND 40
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + A+E + ++DGR +TVN+A
Sbjct: 41 RETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEA 82
>gi|224077836|ref|XP_002305429.1| predicted protein [Populus trichocarpa]
gi|118481826|gb|ABK92850.1| unknown [Populus trichocarpa]
gi|222848393|gb|EEE85940.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 59/78 (75%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W + L++ FS++G++++++++ DRETGRSRGFGFVT ++E + DAI
Sbjct: 7 YRCFVGGLAWATTDQSLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFNNEKAMRDAID 66
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ+LDGR I VN A+
Sbjct: 67 GMNGQDLDGRNITVNEAQ 84
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
++I +RET RSRGFGFVT + + A++ + D+DGR +TVN+A
Sbjct: 37 KIINDRETGRSRGFGFVTFNNEKAMRDAIDGMNGQDLDGRNITVNEA 83
>gi|299530322|ref|ZP_07043747.1| RNA-binding region RNP-1 [Comamonas testosteroni S44]
gi|298721693|gb|EFI62625.1| RNA-binding region RNP-1 [Comamonas testosteroni S44]
Length = 113
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+IYVGNLP+ V ++ L F+E G V +A+V+ DRETGRS+GF FV M+S E AI+A
Sbjct: 4 KIYVGNLPYSVTDSNLRSNFAEFGTVTSAKVMMDRETGRSKGFAFVEMTSADECQAAISA 63
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSSF 365
L G ++DGR+I VN+A+ R+ F
Sbjct: 64 LHGMSVDGRSIVVNLAKPREEGRGF 88
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K++VGNLPY V L F + GTV A +V+ +
Sbjct: 4 KIYVGNLPYSVTDSNLRSNFAEFGTVTSA--------------------------KVMMD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RS+GF FV M++ +E + A+ H +DGR + VN A PR
Sbjct: 38 RETGRSKGFAFVEMTSADECQAAISALHGMSVDGRSIVVNLAKPR 82
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 59/81 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L + D + L++ FS++G V+ ARV+ DR+TGRSRGFGF++ S E A+ A
Sbjct: 41 KLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASALQA 100
Query: 341 LDGQNLDGRAIRVNVAEDRQR 361
+DGQ+L GR IRVN A +++R
Sbjct: 101 MDGQDLHGRRIRVNYATEKRR 121
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 26/103 (25%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLFVG L Y D L F + G V A +VI
Sbjct: 40 SKLFVGGLSYGTDESSLKEAFSQYGDVIEA--------------------------RVIM 73
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+R+T RSRGFGF++ + EEA A++ D+ GR + VN A
Sbjct: 74 DRDTGRSRGFGFISFPSSEEAASALQAMDGQDLHGRRIRVNYA 116
>gi|118489085|gb|ABK96349.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 171
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 58/78 (74%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W + L++ FS++G++++++++ DRETGRSRGFGFVT +E + DAI
Sbjct: 7 YRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAID 66
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ+LDGR I VN A+
Sbjct: 67 GMNGQDLDGRNITVNEAQ 84
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
++I +RET RSRGFGFVT + A++ + D+DGR +TVN+A
Sbjct: 37 KIINDRETGRSRGFGFVTFGNEKAMRDAIDGMNGQDLDGRNITVNEA 83
>gi|118481677|gb|ABK92779.1| unknown [Populus trichocarpa]
gi|118481702|gb|ABK92791.1| unknown [Populus trichocarpa]
gi|118482754|gb|ABK93295.1| unknown [Populus trichocarpa]
gi|118483202|gb|ABK93505.1| unknown [Populus trichocarpa]
Length = 170
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 58/78 (74%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W + L++ FS++G++++++++ DRETGRSRGFGFVT +E + DAI
Sbjct: 7 YRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAID 66
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ+LDGR I VN A+
Sbjct: 67 GMNGQDLDGRNITVNEAQ 84
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
++I +RET RSRGFGFVT + A++ + D+DGR +TVN+A
Sbjct: 37 KIINDRETGRSRGFGFVTFGNEKAMRDAIDGMNGQDLDGRNITVNEA 83
>gi|407039916|gb|EKE39893.1| enhancer binding protein-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 32/209 (15%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
D LF+ NLP+ + EKL +F K VEI +K H GN
Sbjct: 112 DNMLFIKNLPFAITEEKLKEMFSKFEVVEITLIKTHRKKGN------------------- 152
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP 278
++ G F+T+ T EE +KA+ + ++++GR +TV A + + + EP
Sbjct: 153 ----VTKNNGIAFITVKTAEEQKKAIAEMNNFEVEGRKITVAAAYKKAENKQTTKKTNEP 208
Query: 279 G----FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVV--YDRETG--RSRGFGFVTMSS 330
++V NLP+ +++ +++F ++ VV A +V ++++ RS+G+GFVT +
Sbjct: 209 KSLSETNVFVKNLPFTLNDEGFKKLFEKYD-VVEATIVKRHNKKLNVDRSKGYGFVTFKT 267
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDR 359
+ AIA +D ++GR I V A R
Sbjct: 268 AEQQKKAIAEMDNFEVEGRKITVTSAYQR 296
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 28/156 (17%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR-GTQPERAPRVFEPGFR--- 281
SRGF F+ +T +EAEKA+EM R I + V KA PR T ER ++ GF+
Sbjct: 40 SRGFAFIEFATPQEAEKALEM-DRRTIGKMEIKVQKALPREETTTER--KMNRRGFKGKR 96
Query: 282 ------------------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG---RS 320
+++ NLP+ + +L+++FS+ V + R+ G ++
Sbjct: 97 NTRKRHLVKRTNEVTDNMLFIKNLPFAITEEKLKEMFSKFEVVEITLIKTHRKKGNVTKN 156
Query: 321 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
G F+T+ + E AIA ++ ++GR I V A
Sbjct: 157 NGIAFITVKTAEEQKKAIAEMNNFEVEGRKITVAAA 192
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 29/148 (19%)
Query: 125 EPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPE--DAKLFVGNLPYDVDSEKLAMLFEK 182
E EG V A ++ E+ + ++ EP + +FV NLP+ ++ E LFEK
Sbjct: 181 EVEGRKITVAAAYKKAENKQTT----KKTNEPKSLSETNVFVKNLPFTLNDEGFKKLFEK 236
Query: 183 AGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEK 242
VE VK H N+ ++ DRS+G+GFVT T E+ +K
Sbjct: 237 YDVVEATIVKRH----NKKLNV-------------------DRSKGYGFVTFKTAEQQKK 273
Query: 243 AVEMFHRYDIDGRLLTVNKAAPRGTQPE 270
A+ ++++GR +TV A R + E
Sbjct: 274 AIAEMDNFEVEGRKITVTSAYQRAEKKE 301
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora indica
DSM 11827]
Length = 236
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 58/79 (73%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+IYVGNL W + L + F ++G VV++ V+ DRETGRSRGFGFVT SSE E ++AI+
Sbjct: 4 KIYVGNLSWNTTDDTLREAFRQYGNVVDSIVMRDRETGRSRGFGFVTYSSEEEASNAISG 63
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L+ +LDGR I+VN+A R
Sbjct: 64 LNETSLDGRQIKVNLANAR 82
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
AK++VGNL ++ + L F + G V V ++ V+
Sbjct: 3 AKIYVGNLSWNTTDDTLREAFRQYGNV-------------------VDSI-------VMR 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RSRGFGFVT S+ EEA A+ + +DGR + VN A R
Sbjct: 37 DRETGRSRGFGFVTYSSEEEASNAISGLNETSLDGRQIKVNLANAR 82
>gi|126273923|ref|XP_001387749.1| nuclear localization sequence binding protein [Scheffersomyces
stipitis CBS 6054]
gi|126213619|gb|EAZ63726.1| nuclear localization sequence binding protein, partial
[Scheffersomyces stipitis CBS 6054]
Length = 245
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 46/213 (21%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E A LFVG L +++D E L FE G V A +V
Sbjct: 1 EPATLFVGRLSWNIDDEWLRREFEPLGGVISA--------------------------RV 34
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL--------------TVNKAA 263
I R T +SRG+G+V + AEKA+ + ++DGR + T N+A
Sbjct: 35 IMERATGKSRGYGYVDFDSKSAAEKALNEYQGRELDGRPINLDMSTGKPHVTKSTENRAK 94
Query: 264 PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGF 323
G P P +++GNL + D L +F HG V++ R+ +T + +GF
Sbjct: 95 QYGDTPS------APSDTLFIGNLSFNADRDNLFNIFGVHGTVISCRIPTHPDTQQPKGF 148
Query: 324 GFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
G+V SS E A+ AL+G+ ++GRA R++ +
Sbjct: 149 GYVQFSSVDEAKAAMEALNGEYIEGRACRLDFS 181
>gi|400602999|gb|EJP70597.1| cutinase negative acting protein [Beauveria bassiana ARSEF 2860]
Length = 448
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 109/235 (46%), Gaps = 54/235 (22%)
Query: 150 EEEFVEPPEDAK-------LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGF 202
E+E E P+ AK LF G+L + VD L F+ FGN
Sbjct: 186 EDEIDEAPKKAKSDDAPMTLFAGSLSWGVDDNALYEAFKS--------------FGN--- 228
Query: 203 HMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+ +V+ ++ T RSRGFG+V E A KA E +IDGR L ++ A
Sbjct: 229 ---------IVSARVVTDKNTGRSRGFGYVDFGDSESATKAYEAMQGQEIDGRALNLDYA 279
Query: 263 APRGTQPERAPRVFEPGFR-----------IYVGNLPWEVDNARLEQVFSEHGKVVNARV 311
+ T+ + R + R ++VGNLP++ + + Q FSE +V + R+
Sbjct: 280 NAKPTEGKPQDRAADRAKRHGDTLSAESDTLFVGNLPFDTEQDTVRQFFSEVAEVASVRL 339
Query: 312 VYDRETGRSRGFGFVTMSSETELNDAIAALDGQN-------LDGRAIRVNVAEDR 359
D ++G +GFG+VT +S + DA +ALD +N + RA+R++ A R
Sbjct: 340 PTDPDSGNLKGFGYVTFNS---IEDAKSALDAKNGASIGNGRNSRAVRLDFAGSR 391
>gi|300176323|emb|CBK23634.2| unnamed protein product [Blastocystis hominis]
Length = 325
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 97/217 (44%), Gaps = 51/217 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K+ V N+P+ +SE L F G V A ++YN
Sbjct: 7 KVLVKNIPFTCNSETLIEFFSACGDVIDA--------------------------NILYN 40
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV-------------------NK 261
RE+ RSRGFGFV+ + E +KA++M + +++GR+L V +K
Sbjct: 41 RESGRSRGFGFVSFRSEEGLKKALDM-NGTNMNGRVLRVIKKEDREDRDERRVRDRRTHK 99
Query: 262 AAPRGTQPERAP-----RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRE 316
R +RAP R ++ ++ V LPW+ A L ++F + GK+V +V +RE
Sbjct: 100 DVKRERSRDRAPAPAPARSYDNTNKLIVLQLPWKCTKADLTKLFDKFGKIVYCNIVVNRE 159
Query: 317 TGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 353
TG SRG G V E A+ +D +GR + V
Sbjct: 160 TGLSRGMGIVKYEEEESYQKALKEMDCFEYEGRKLYV 196
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
EP +++ V N+P+ ++ L + FS G V++A ++Y+RE+GRSRGFGFV+ SE L
Sbjct: 3 EPEYKVLVKNIPFTCNSETLIEFFSACGDVIDANILYNRESGRSRGFGFVSFRSEEGLKK 62
Query: 337 AIAALDGQNLDGRAIRV 353
A+ ++G N++GR +RV
Sbjct: 63 AL-DMNGTNMNGRVLRV 78
>gi|357152879|ref|XP_003576265.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 165
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 58/81 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L+ FS G++++A+++ DRETGRSRGFGFVT ++E + AI
Sbjct: 4 YRCFVGGLAWATDDHNLQSAFSNFGEILDAKIIQDRETGRSRGFGFVTFATEESMQAAIE 63
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
++G+ LDGR+I VN A+ R+
Sbjct: 64 GMNGKELDGRSITVNQAQSRR 84
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F G EI + K +I +
Sbjct: 5 RCFVGGLAWATDDHNLQSAFSNFG--EILDAK------------------------IIQD 38
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGFVT +T E + A+E + ++DGR +TVN+A R
Sbjct: 39 RETGRSRGFGFVTFATEESMQAAIEGMNGKELDGRSITVNQAQSR 83
>gi|392593259|gb|EIW82584.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 116
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 55/79 (69%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+IYVGNL W + L Q FS G VV++ V+ DR+TGRSRGFGFVT SS E AI+
Sbjct: 5 KIYVGNLSWNTTDDTLRQAFSTFGNVVDSVVMRDRDTGRSRGFGFVTYSSTQEAESAISG 64
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L+ Q+LDGR I+VN+A R
Sbjct: 65 LNDQDLDGRRIKVNIANPR 83
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
AK++VGNL ++ + L F G V V +V V+
Sbjct: 4 AKIYVGNLSWNTTDDTLRQAFSTFGNV-------------------VDSV-------VMR 37
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+R+T RSRGFGFVT S+ +EAE A+ + D+DGR + VN A PR
Sbjct: 38 DRDTGRSRGFGFVTYSSTQEAESAISGLNDQDLDGRRIKVNIANPR 83
>gi|331241775|ref|XP_003333535.1| hypothetical protein PGTG_14957 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312525|gb|EFP89116.1| small subunit ribosomal protein S19 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 206
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 54/81 (66%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G +++VGNL W D+ L+ F + G VV+A V+ DRETGRSRGFGF+T E AI
Sbjct: 31 GNKLFVGNLAWTTDSGSLKSAFGQFGDVVDAIVMQDRETGRSRGFGFITFKEEAAAPGAI 90
Query: 339 AALDGQNLDGRAIRVNVAEDR 359
AL+GQ LDGR IRVN A +
Sbjct: 91 EALNGQELDGREIRVNYANSQ 111
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 49/107 (45%), Gaps = 26/107 (24%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
PP KLFVGNL + DS L F + G V V A+
Sbjct: 28 PPGGNKLFVGNLAWTTDSGSLKSAFGQFGDV-------------------VDAI------ 62
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
V+ +RET RSRGFGF+T A A+E + ++DGR + VN A
Sbjct: 63 -VMQDRETGRSRGFGFITFKEEAAAPGAIEALNGQELDGREIRVNYA 108
>gi|7024451|dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W ++ L + FS +G ++ ++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 FRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQNLDGR I VN A+
Sbjct: 68 GMNGQNLDGRNITVNEAQ 85
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
++I +RET RSRGFGFVT + A+E + ++DGR +TVN+A
Sbjct: 38 KIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 84
>gi|194880963|ref|XP_001974622.1| GG21846 [Drosophila erecta]
gi|190657809|gb|EDV55022.1| GG21846 [Drosophila erecta]
Length = 635
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 43/222 (19%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
E AKLF V N D D EKL FE G + +V
Sbjct: 177 EKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKV---------------------- 214
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERA 272
++E +S+GFGFV T E AE AV+ + D+ +G+ L V +A + + +
Sbjct: 215 -----MSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQEL 269
Query: 273 PRVFEP----------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
R FE G +YV NL +D+ RL FS +G + +A+V+ D E GRS+G
Sbjct: 270 KRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEE-GRSKG 328
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
FGFV ++ +E A+ L+G+ + + + V +A+ ++ R +
Sbjct: 329 FGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERKA 370
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
E S+G+GFV T E A +++ + ++G+ + V K PR + + +
Sbjct: 125 EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTN 184
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YV N + D+ +L++ F +GK+ + +V+ +E G+S+GFGFV + A+ AL
Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQAL 243
Query: 342 DGQNL-DGRAIRVNVAEDRQRR 362
+G+++ +G+++ V A+ + R
Sbjct: 244 NGKDMGEGKSLYVARAQKKAER 265
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 35/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+LP DV+ L F AG V + VC VI
Sbjct: 2 ASLYVGDLPQDVNESGLFEKFSTAGPV---------------LSIRVCR-------DVI- 38
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
T RS G+ +V +AE+A++ + +D L NK R +R P + G
Sbjct: 39 ---TRRSLGYAYVNFQQPADAERALDTMN-FD-----LLRNKPI-RIMWSQRDPSLRRSG 88
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN + FS G +++ +V D E G S+G+GFV +E N +I
Sbjct: 89 VGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSI 147
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+G+ + V R+ R
Sbjct: 148 DKVNGMLLNGKKVYVGKFIPRKER 171
>gi|357119387|ref|XP_003561423.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 161
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 57/78 (73%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L+ FS G++++++++ DRETGRSRGFGFVT +SE + DAI
Sbjct: 6 YRCFVGGLAWATDDRGLQDAFSSFGEIIDSKIINDRETGRSRGFGFVTFASEQSMRDAIE 65
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G++LDGR I VN A+
Sbjct: 66 GMNGKDLDGRNITVNEAQ 83
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F G EI + K +I +
Sbjct: 7 RCFVGGLAWATDDRGLQDAFSSFG--EIIDSK------------------------IIND 40
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT ++ + A+E + D+DGR +TVN+A
Sbjct: 41 RETGRSRGFGFVTFASEQSMRDAIEGMNGKDLDGRNITVNEA 82
>gi|312282683|dbj|BAJ34207.1| unnamed protein product [Thellungiella halophila]
Length = 166
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W +A LE+ FS+ G+V++++++ DRETGRSRGFGFVT E + DAI
Sbjct: 7 YRCFVGGLAWATADADLERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMRDAIE 66
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR+I VN A+
Sbjct: 67 EMNGKELDGRSITVNEAQ 84
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
++I +RET RSRGFGFVT + A+E + ++DGR +TVN+A
Sbjct: 37 KIINDRETGRSRGFGFVTFKDEKSMRDAIEEMNGKELDGRSITVNEA 83
>gi|359806849|ref|NP_001241058.1| uncharacterized protein LOC100776344 [Glycine max]
gi|255634852|gb|ACU17785.1| unknown [Glycine max]
Length = 340
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 30/207 (14%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P KLFV L ++ SE L F++ G +E V
Sbjct: 64 PAHRKLFVRGLAWNTTSETLRAAFQEHGEIEEGAV------------------------- 98
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
IY++ T +SRG+GF+T +E ++A+ + IDGRL N A + AP +
Sbjct: 99 -IYDKVTGKSRGYGFITFKNMESTQQALRAPSKL-IDGRLAVCNLACESLSGTSSAPDLS 156
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
++Y+G+L EV + L F+ HG++ V YDR+T SRGFGFVT +
Sbjct: 157 L--RKLYIGSLSPEVTSEILLNYFARHGEIEEGSVAYDRDTNESRGFGFVTYKTAEAAKK 214
Query: 337 AIAALDGQNLDGRAIRVNVAEDRQRRS 363
AI L+ + L GR I V A+ ++ ++
Sbjct: 215 AIDDLE-KTLGGRNIVVKYADSQKGKT 240
>gi|399931811|gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
Length = 144
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 57/82 (69%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W D+ L F+ G VV+ARV+ DR++GRSRGFGFV S + N+AI A
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKA 98
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
+DGQ L GR IRV++A++R R
Sbjct: 99 MDGQELQGRNIRVSIAQERAPR 120
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 49/114 (42%), Gaps = 32/114 (28%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG L + D + L F G V A +VI +
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDA--------------------------RVIVD 72
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
R++ RSRGFGFV S E A +A++ ++ GR + V+ A ERAPR
Sbjct: 73 RDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIA------QERAPR 120
>gi|126658060|ref|ZP_01729212.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
gi|126620698|gb|EAZ91415.1| RNA-binding region RNP-1 [Cyanothece sp. CCY0110]
Length = 94
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 57/83 (68%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNL ++V LEQVF+E+G V ++ DRETG+SRGFGFV M +ETE AI AL
Sbjct: 3 IYVGNLSYDVTQVDLEQVFAEYGTVKRVQIPSDRETGKSRGFGFVEMGTETEETAAIEAL 62
Query: 342 DGQNLDGRAIRVNVAEDRQRRSS 364
DG GRA++VN A R+ R S
Sbjct: 63 DGAEWMGRALKVNKARPRENRKS 85
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 48/104 (46%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNL YDV L +F + GTV+ +Q+ +R
Sbjct: 3 IYVGNLSYDVTQVDLEQVFAEYGTVK--------------------------RVQIPSDR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET +SRGFGFV M T E A+E + GR L VNKA PR
Sbjct: 37 ETGKSRGFGFVEMGTETEETAAIEALDGAEWMGRALKVNKARPR 80
>gi|399931807|gb|AFP57453.1| RNA-binding glycine-rich protein [Nicotiana rustica]
Length = 144
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 57/82 (69%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W D+ L F+ G VV+ARV+ DR++GRSRGFGFV S + N+AI A
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKA 98
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
+DGQ L GR IRV++A++R R
Sbjct: 99 MDGQELQGRNIRVSIAQERAPR 120
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 49/114 (42%), Gaps = 32/114 (28%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG L + D + L F G V A +VI +
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDA--------------------------RVIVD 72
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
R++ RSRGFGFV S E A +A++ ++ GR + V+ A ERAPR
Sbjct: 73 RDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIA------QERAPR 120
>gi|195584475|ref|XP_002082032.1| GD11341 [Drosophila simulans]
gi|194194041|gb|EDX07617.1| GD11341 [Drosophila simulans]
Length = 379
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 106/225 (47%), Gaps = 43/225 (19%)
Query: 155 EPPEDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
E E AKLF V N D D EKL FE G + +V
Sbjct: 174 ELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKV------------------- 214
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI-DGRLLTVNKAAPRGTQP 269
++E +S+GFGFV T E AE AV+ + D+ +G+ L V +A + +
Sbjct: 215 --------MSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQ 266
Query: 270 ERAPRVFEP----------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGR 319
+ R FE G +YV NL +D+ RL FS +G + +A+V+ D E GR
Sbjct: 267 QELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEE-GR 325
Query: 320 SRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
S+GFGFV ++ +E A+ L+G+ + + + V +A+ ++ R +
Sbjct: 326 SKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERKA 370
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
E S+G+GFV T E A +++ + ++G+ + V K PR + + +
Sbjct: 125 EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTN 184
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YV N + D+ +L++ F +GK+ + +V+ +E G+S+GFGFV + A+ AL
Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQAL 243
Query: 342 DGQNL-DGRAIRVNVAEDRQRR 362
+G+++ +G+++ V A+ + R
Sbjct: 244 NGKDMGEGKSLYVARAQKKAER 265
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 35/195 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+LP DV+ L F AG V + VC VI
Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPV---------------LSIRVCR-------DVI- 38
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
T RS G+ +V +AE+A++ + +D+ V R +R P + G
Sbjct: 39 ---TRRSLGYAYVNFQQPADAERALDTMN-FDL------VRNKPIRIMWSQRDPSLRRSG 88
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN + FS G +++ +V D E G S+G+GFV +E N +I
Sbjct: 89 VGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSI 147
Query: 339 AALDGQNLDGRAIRV 353
++G L+G+ + V
Sbjct: 148 DKVNGMLLNGKKVYV 162
>gi|10799202|gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 170
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 56/78 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W +N LE F+ G+V++++V+ DRETGRSRGFGFVT SSE + DAI
Sbjct: 8 YRCFVGGLAWATNNETLEHAFANFGQVLDSKVITDRETGRSRGFGFVTFSSEQSMLDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 NMNGKELDGRNITVNQAQ 85
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + ++E L F G V + +VI +
Sbjct: 9 RCFVGGLAWATNNETLEHAFANFGQVLDS--------------------------KVITD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT S+ + A+E + ++DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQA 84
>gi|399931799|gb|AFP57449.1| RNA-binding glycine-rich protein [Nicotiana glauca]
Length = 144
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 57/82 (69%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W D+ L F+ G VV+ARV+ DR++GRSRGFGFV S + N+AI A
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKA 98
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
+DGQ L GR IRV++A++R R
Sbjct: 99 MDGQELQGRNIRVSIAQERAPR 120
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 49/114 (42%), Gaps = 32/114 (28%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG L + D + L F G V A +VI +
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDA--------------------------RVIVD 72
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
R++ RSRGFGFV S E A +A++ ++ GR + V+ A ERAPR
Sbjct: 73 RDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIA------QERAPR 120
>gi|390597906|gb|EIN07305.1| polyadenylate binding protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 668
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 84/156 (53%), Gaps = 11/156 (7%)
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
V+ E RSRGFGFV T EEA+KAV+ H D GR L V++A + + E R +
Sbjct: 263 VLQRDEEGRSRGFGFVNFETHEEAQKAVDTLHDSDFKGRKLFVSRAQKKSEREEELRRSY 322
Query: 277 E----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
E G +Y+ NL +VD+ +L F G + +A+V+ E G S+GFGFV
Sbjct: 323 EQAKMEKMSKYQGVNLYIKNLEDDVDDEKLRDAFEPFGAITSAKVMRT-EGGTSKGFGFV 381
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
SS E A+A ++ + + + + V++A+ R+ R
Sbjct: 382 CFSSPDEATKAVAEMNNKMMGSKPLYVSLAQRREVR 417
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 2/164 (1%)
Query: 199 NQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 258
N+ H A V +V + E RS+G+GFV T E AE A++ + ++ + +
Sbjct: 153 NKALHDTFAAFGNVLSCKVATD-EMGRSKGYGFVHYETNEAAESAIKAVNGMLLNDKKVY 211
Query: 259 VNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 318
V + + + + +YV N+ E ++ ++F+ G V +A + D E G
Sbjct: 212 VGHHVSKKDRQAKLDEQKKQFTNVYVKNIDPEANDDEFRELFTPFGNVTSAVLQRDEE-G 270
Query: 319 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
RSRGFGFV + E A+ L + GR + V+ A+ + R
Sbjct: 271 RSRGFGFVNFETHEEAQKAVDTLHDSDFKGRKLFVSRAQKKSER 314
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%)
Query: 275 VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
V P +YVG L V A L ++F+ G V + RV D T RS G+ +V + +
Sbjct: 47 VPAPSASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYFNAADG 106
Query: 335 NDAIAALDGQNLDGRAIRV 353
A+ L+ + GRA R+
Sbjct: 107 ERALEQLNYSLIKGRACRI 125
>gi|331241781|ref|XP_003333538.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312528|gb|EFP89119.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 179
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 55/81 (67%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G +++VGNL W D+ L+ F + G V++A V+ DRETGRSRGFGF+T E + AI
Sbjct: 7 GGKLFVGNLAWTTDSGSLKSAFGQFGDVIDAIVMQDRETGRSRGFGFITFKEEADAPGAI 66
Query: 339 AALDGQNLDGRAIRVNVAEDR 359
AL+GQ LDGR IRVN A +
Sbjct: 67 EALNGQELDGREIRVNYANSQ 87
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 26/106 (24%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P KLFVGNL + DS L F + G V + A+
Sbjct: 5 PAGGKLFVGNLAWTTDSGSLKSAFGQFGDV-------------------IDAI------- 38
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
V+ +RET RSRGFGF+T +A A+E + ++DGR + VN A
Sbjct: 39 VMQDRETGRSRGFGFITFKEEADAPGAIEALNGQELDGREIRVNYA 84
>gi|224105391|ref|XP_002313795.1| predicted protein [Populus trichocarpa]
gi|222850203|gb|EEE87750.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 58/78 (74%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W + L++ FS++G++++++++ DRETGRSRGFGFVT +E + DAI
Sbjct: 6 YRCFVGGLAWATTDQVLQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAID 65
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ+LDGR I VN A+
Sbjct: 66 GMNGQDLDGRNITVNEAQ 83
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
++I +RET RSRGFGFVT + A++ + D+DGR +TVN+A
Sbjct: 36 KIINDRETGRSRGFGFVTFGNEKAMRDAIDGMNGQDLDGRNITVNEA 82
>gi|309792103|ref|ZP_07686576.1| RNP-1 like RNA-binding protein [Oscillochloris trichoides DG-6]
gi|308225847|gb|EFO79602.1| RNP-1 like RNA-binding protein [Oscillochloris trichoides DG6]
Length = 114
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VGNLPW V +A LE++F+ HG V +ARV+ DR+TGRSRGFGFV + + ++ + I A
Sbjct: 7 KLFVGNLPWSVGDADLERIFASHGDVQSARVINDRDTGRSRGFGFVEIDVD-DVAEVIRA 65
Query: 341 LDGQNLDGRAIRVNVAEDR 359
DG +DGR +RVN AED+
Sbjct: 66 TDGHEIDGRPLRVNEAEDK 84
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 27/103 (26%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
KLFVGNLP+ V L +F G V+ A +VI
Sbjct: 6 VKLFVGNLPWSVGDADLERIFASHGDVQSA--------------------------RVIN 39
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+R+T RSRGFGFV + V++ + + ++IDGR L VN+A
Sbjct: 40 DRDTGRSRGFGFVEID-VDDVAEVIRATDGHEIDGRPLRVNEA 81
>gi|8163877|gb|AAF73892.1|AF224345_1 enhancer binding protein-1 [Entamoeba histolytica]
Length = 247
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 32/209 (15%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
D LF+ NLP+ + EKL +F K G VEI +K H GN
Sbjct: 53 DNMLFIKNLPFAITEEKLKEMFSKFGVVEITLIKTHRKKGN------------------- 93
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP 278
++ G F+T+ T EE +KA+ ++++GR +TV A + + + EP
Sbjct: 94 ----VTKNNGIAFITVKTAEEQKKAIAEMDNFEVEGRKITVAAAYKKVENKQTTKKTNEP 149
Query: 279 G----FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVV--YDRETG--RSRGFGFVTMSS 330
++V NLP+ + + +++F ++ VV A +V ++++ RS+G+GFVT +
Sbjct: 150 KSLSETNVFVKNLPFTLTDEGFKKLFEKYD-VVEATIVKRHNKKLNVDRSKGYGFVTFKT 208
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDR 359
+ AIA +D ++GR I V A R
Sbjct: 209 AEQQKKAIAEMDNFEVEGRKITVTSAYQR 237
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 23/109 (21%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FV NLP+ + E LFEK VE VK H N+ ++
Sbjct: 157 VFVKNLPFTLTDEGFKKLFEKYDVVEATIVKRH----NKKLNV----------------- 195
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 270
DRS+G+GFVT T E+ +KA+ ++++GR +TV A R + E
Sbjct: 196 --DRSKGYGFVTFKTAEQQKKAIAEMDNFEVEGRKITVTSAYQRAEKKE 242
>gi|401409932|ref|XP_003884414.1| putative splicing factor [Neospora caninum Liverpool]
gi|325118832|emb|CBZ54384.1| putative splicing factor [Neospora caninum Liverpool]
Length = 550
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 33/206 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DA L++GNL VD + L LF + G V V L GN
Sbjct: 27 QDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNH----------------- 69
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+G+GFV + +A+ A+++ + + G+ L +NK+A + R F+
Sbjct: 70 ---------QGYGFVEFTNEVDADYALKLMNMVKLYGKSLRLNKSA-------QDRRNFD 113
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
G I++GNL +VD + FS G ++ A+++ D ETG SRGFGFV+ + + A
Sbjct: 114 VGANIFLGNLDPDVDEKTIYDTFSTFGNILTAKIMRDPETGISRGFGFVSFDTFEASDAA 173
Query: 338 IAALDGQNLDGRAIRVNVAEDRQRRS 363
+AA++GQ + R I V+ A + R
Sbjct: 174 LAAMNGQFICNRPIHVSYAYKKDTRG 199
>gi|385808713|ref|YP_005845109.1| RRM domain RNA-binding protein [Ignavibacterium album JCM 16511]
gi|383800761|gb|AFH47841.1| RRM domain RNA-binding protein [Ignavibacterium album JCM 16511]
Length = 83
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 55/80 (68%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG+LPW VD+ L + F EHG VV+A+V+ DRETGRSRGFGFV M + + AI A
Sbjct: 4 KLFVGSLPWSVDDETLRETFEEHGNVVSAKVIKDRETGRSRGFGFVEMENSADAKSAIEA 63
Query: 341 LDGQNLDGRAIRVNVAEDRQ 360
L+ L GR I VN A+ R
Sbjct: 64 LNDSELKGRNIVVNEAKSRN 83
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 52/105 (49%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG+LP+ VD E L FE+ G V A +VI +
Sbjct: 4 KLFVGSLPWSVDDETLRETFEEHGNVVSA--------------------------KVIKD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGFV M +A+ A+E + ++ GR + VN+A R
Sbjct: 38 RETGRSRGFGFVEMENSADAKSAIEALNDSELKGRNIVVNEAKSR 82
>gi|195487595|ref|XP_002091975.1| GE11925 [Drosophila yakuba]
gi|194178076|gb|EDW91687.1| GE11925 [Drosophila yakuba]
Length = 634
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 43/222 (19%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
E AKLF V N D D EKL FE G + +V
Sbjct: 177 EKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKV---------------------- 214
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERA 272
++E +S+GFGFV T E AE AV+ + D+ +G+ L V +A + + +
Sbjct: 215 -----MSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQEL 269
Query: 273 PRVFEP----------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
R FE G +YV NL +D+ RL FS +G + +A+V+ D E GRS+G
Sbjct: 270 KRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRVAFSPYGNITSAKVMTDEE-GRSKG 328
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
FGFV ++ +E A+ L+G+ + + + V +A+ ++ R +
Sbjct: 329 FGFVCFNAPSEATCAVTELNGRVVGSKPLYVALAQRKEERKA 370
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
E S+G+GFV T E A +++ + ++G+ + V K PR + + +
Sbjct: 125 EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTN 184
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YV N + D+ +L++ F +GK+ + +V+ +E G+S+GFGFV + A+ AL
Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQAL 243
Query: 342 DGQNL-DGRAIRVNVAEDRQRR 362
+G+++ +G+++ V A+ + R
Sbjct: 244 NGKDMGEGKSLYVARAQKKAER 265
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 35/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+LP DV+ L F AG V + VC VI
Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPV---------------LSIRVCR-------DVI- 38
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
T RS G+ +V +AE+A++ + +D+ V R +R P + G
Sbjct: 39 ---TRRSLGYAYVNFQQPADAERALDTMN-FDL------VRNKPIRIMWSQRDPSLRRSG 88
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN + FS G +++ +V D E G S+G+GFV +E N +I
Sbjct: 89 VGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSI 147
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+G+ + V R+ R
Sbjct: 148 DKVNGMLLNGKKVYVGKFIPRKER 171
>gi|237833669|ref|XP_002366132.1| splicing factor, putative [Toxoplasma gondii ME49]
gi|211963796|gb|EEA98991.1| splicing factor, putative [Toxoplasma gondii ME49]
Length = 576
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 33/206 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DA L++GNL VD + L LF + G V V L GN
Sbjct: 27 QDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNH----------------- 69
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+G+GFV +A+ A+++ + + G+ L +NK+A + R F+
Sbjct: 70 ---------QGYGFVEFRNEVDADYALKLMNMVKLYGKALRLNKSA-------QDRRNFD 113
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
G +++GNL +VD + FS G +++A+++ D ETG SRGFGFV+ + + A
Sbjct: 114 VGANVFLGNLDPDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAA 173
Query: 338 IAALDGQNLDGRAIRVNVAEDRQRRS 363
+AA++GQ + R I V+ A + R
Sbjct: 174 LAAMNGQFICNRPIHVSYAYKKDTRG 199
>gi|302835614|ref|XP_002949368.1| hypothetical protein VOLCADRAFT_104291 [Volvox carteri f.
nagariensis]
gi|300265195|gb|EFJ49387.1| hypothetical protein VOLCADRAFT_104291 [Volvox carteri f.
nagariensis]
Length = 340
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 93/197 (47%), Gaps = 33/197 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
AKLF+G L +D EKL F K G E+ +V V+
Sbjct: 61 AKLFLGGLSWDTTEEKLKEYFLKYG--EVHDVV------------------------VMR 94
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+R+T R RGFGF+T + + A + IDGR + + P G ++ PR
Sbjct: 95 DRQTRRPRGFGFITFT--DPAAAQAACAESHTIDGRQIDAKPSVPHGEGGQQ-PR----S 147
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+I+VG L + ++ L+Q F ++G VV A V+ D +GRSRGFGFVT E+ + A
Sbjct: 148 KKIFVGGLAPDTEDVHLKQYFEQYGTVVEALVMVDHNSGRSRGFGFVTFGEESSVEKVFA 207
Query: 340 ALDGQNLDGRAIRVNVA 356
A L G+ + V A
Sbjct: 208 AGQMHELGGKQVEVKSA 224
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 26/111 (23%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P K+FVG L D + L FE+ GTV A L+
Sbjct: 145 PRSKKIFVGGLAPDTEDVHLKQYFEQYGTVVEA------------------------LVM 180
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT 267
V +N + RSRGFGFVT EK +++ G+ + V A P+G+
Sbjct: 181 VDHN--SGRSRGFGFVTFGEESSVEKVFAAGQMHELGGKQVEVKSATPKGS 229
>gi|299751777|ref|XP_001830476.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
gi|298409530|gb|EAU91356.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
Length = 142
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W + L Q FS++G V+++ V+ DR+TGRSRGFGFVT S+ E + AIA+
Sbjct: 4 KVYVGNLSWNTTDDSLRQAFSQYGNVLDSIVMRDRDTGRSRGFGFVTYSATEEADAAIAS 63
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L Q LDGR I+VN+A R
Sbjct: 64 LHDQELDGRRIKVNIANAR 82
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
AK++VGNL ++ + L F + G V + V+
Sbjct: 3 AKVYVGNLSWNTTDDSLRQAFSQYGNVLDS--------------------------IVMR 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+R+T RSRGFGFVT S EEA+ A+ H ++DGR + VN A R
Sbjct: 37 DRDTGRSRGFGFVTYSATEEADAAIASLHDQELDGRRIKVNIANAR 82
>gi|399931805|gb|AFP57452.1| RNA-binding glycine-rich protein [Nicotiana repanda]
Length = 144
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 56/82 (68%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W D+ L F+ G VV+ARV+ DR++GRSRGFGFV S + N+AI A
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKA 98
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
+DGQ L GR IRV +A++R R
Sbjct: 99 MDGQELQGRNIRVTIAQERAPR 120
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 32/114 (28%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG L + D + L F G V A +VI +
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDA--------------------------RVIVD 72
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
R++ RSRGFGFV S E A +A++ ++ GR + V A ERAPR
Sbjct: 73 RDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVTIA------QERAPR 120
>gi|221486340|gb|EEE24601.1| splicing factor, putative [Toxoplasma gondii GT1]
Length = 576
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 33/206 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DA L++GNL VD + L LF + G V V L GN
Sbjct: 27 QDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNH----------------- 69
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+G+GFV +A+ A+++ + + G+ L +NK+A + R F+
Sbjct: 70 ---------QGYGFVEFRNEVDADYALKLMNMVKLYGKALRLNKSA-------QDRRNFD 113
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
G +++GNL +VD + FS G +++A+++ D ETG SRGFGFV+ + + A
Sbjct: 114 VGANVFLGNLDPDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAA 173
Query: 338 IAALDGQNLDGRAIRVNVAEDRQRRS 363
+AA++GQ + R I V+ A + R
Sbjct: 174 LAAMNGQFICNRPIHVSYAYKKDTRG 199
>gi|1778374|gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum]
Length = 146
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 59/79 (74%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G L + VD+ L+ F+ +G+VV ARV+ DR+TGRSRGFGFV +S+ A++A
Sbjct: 37 KLFIGGLSYGVDDQSLKDAFASYGEVVEARVITDRDTGRSRGFGFVNFTSDESATSALSA 96
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DGQ+L+GR IRV+ A DR
Sbjct: 97 MDGQDLNGRNIRVSYANDR 115
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 26/119 (21%)
Query: 152 EFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFY 211
++ +KLF+G L Y VD + L F G E+ E +
Sbjct: 28 NYLRHMSSSKLFIGGLSYGVDDQSLKDAFASYG--EVVEAR------------------- 66
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 270
VI +R+T RSRGFGFV ++ E A A+ D++GR + V+ A R + P
Sbjct: 67 -----VITDRDTGRSRGFGFVNFTSDESATSALSAMDGQDLNGRNIRVSYANDRPSAPR 120
>gi|399931801|gb|AFP57450.1| RNA-binding glycine-rich protein [Nicotiana goodspeedii]
Length = 144
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 56/82 (68%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W D+ L + G VV+ARV+ DR++GRSRGFGFV S + N+AI A
Sbjct: 39 KLFVGGLSWGTDDQSLRDALATFGDVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKA 98
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
+DGQ L GR IRVN+A++R R
Sbjct: 99 MDGQELQGRNIRVNIAQERAPR 120
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 48/114 (42%), Gaps = 32/114 (28%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG L + D + L G V A +VI +
Sbjct: 39 KLFVGGLSWGTDDQSLRDALATFGDVVDA--------------------------RVIVD 72
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
R++ RSRGFGFV S E A +A++ ++ GR + VN A ERAPR
Sbjct: 73 RDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVNIA------QERAPR 120
>gi|17136378|ref|NP_476667.1| polyA-binding protein, isoform A [Drosophila melanogaster]
gi|24654793|ref|NP_725749.1| polyA-binding protein, isoform B [Drosophila melanogaster]
gi|24654797|ref|NP_725750.1| polyA-binding protein, isoform C [Drosophila melanogaster]
gi|195335482|ref|XP_002034394.1| GM21847 [Drosophila sechellia]
gi|76803808|sp|P21187.3|PABP_DROME RecName: Full=Polyadenylate-binding protein; Short=PABP;
Short=Poly(A)-binding protein
gi|7302665|gb|AAF57745.1| polyA-binding protein, isoform B [Drosophila melanogaster]
gi|7302666|gb|AAF57746.1| polyA-binding protein, isoform C [Drosophila melanogaster]
gi|21428474|gb|AAM49897.1| LD24412p [Drosophila melanogaster]
gi|21626472|gb|AAM68175.1| polyA-binding protein, isoform A [Drosophila melanogaster]
gi|194126364|gb|EDW48407.1| GM21847 [Drosophila sechellia]
gi|220946756|gb|ACL85921.1| pAbp-PA [synthetic construct]
Length = 634
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 43/222 (19%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
E AKLF V N D D EKL FE G + +V
Sbjct: 177 EKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKV---------------------- 214
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERA 272
++E +S+GFGFV T E AE AV+ + D+ +G+ L V +A + + +
Sbjct: 215 -----MSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQEL 269
Query: 273 PRVFEP----------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
R FE G +YV NL +D+ RL FS +G + +A+V+ D E GRS+G
Sbjct: 270 KRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEE-GRSKG 328
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
FGFV ++ +E A+ L+G+ + + + V +A+ ++ R +
Sbjct: 329 FGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERKA 370
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
E S+G+GFV T E A +++ + ++G+ + V K PR + + +
Sbjct: 125 EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTN 184
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YV N + D+ +L++ F +GK+ + +V+ +E G+S+GFGFV + A+ AL
Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQAL 243
Query: 342 DGQNL-DGRAIRVNVAEDRQRR 362
+G+++ +G+++ V A+ + R
Sbjct: 244 NGKDMGEGKSLYVARAQKKAER 265
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 35/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+LP DV+ L F AG V + VC VI
Sbjct: 2 ASLYVGDLPQDVNESGLFDKFSSAGPV---------------LSIRVCR-------DVI- 38
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
T RS G+ +V +AE+A++ + +D+ V R +R P + G
Sbjct: 39 ---TRRSLGYAYVNFQQPADAERALDTMN-FDL------VRNKPIRIMWSQRDPSLRRSG 88
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN + FS G +++ +V D E G S+G+GFV +E N +I
Sbjct: 89 VGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSI 147
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+G+ + V R+ R
Sbjct: 148 DKVNGMLLNGKKVYVGKFIPRKER 171
>gi|297793663|ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
gi|297310551|gb|EFH40975.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
Length = 327
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 57/79 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G + + +D L + F+++G+VV RV+ DRETGRSRGFGFVT +S + AI A
Sbjct: 41 KLFIGGMAYSMDEDSLREAFTKYGEVVETRVILDRETGRSRGFGFVTFTSSEAASSAIQA 100
Query: 341 LDGQNLDGRAIRVNVAEDR 359
LDG++L GR ++VN A DR
Sbjct: 101 LDGRDLHGRVVKVNYANDR 119
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 26/112 (23%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
+ +KLF+G + Y +D + L F K G E+ E +
Sbjct: 34 IRCMSSSKLFIGGMAYSMDEDSLREAFTKYG--EVVETR--------------------- 70
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
VI +RET RSRGFGFVT ++ E A A++ D+ GR++ VN A R
Sbjct: 71 ---VILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYANDR 119
>gi|392375173|ref|YP_003207006.1| RNP-1 like RNA-binding protein [Candidatus Methylomirabilis
oxyfera]
gi|258592866|emb|CBE69175.1| RNP-1 like RNA-binding protein (modular protein) [Candidatus
Methylomirabilis oxyfera]
Length = 140
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 72/109 (66%), Gaps = 2/109 (1%)
Query: 253 DGRLLTVNKAAPRGTQPERAPRVFEP-GFRIYVGNLPWEVDNARLEQVFSEHGK-VVNAR 310
DG + T + P ++PE R FE G R+YVGNLP++ D A L +F E G+ V + +
Sbjct: 3 DGTMATASIELPVKSRPEADERSFESMGTRVYVGNLPFDTDEAALRTLFEEGGRRVADVK 62
Query: 311 VVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
++ DR+TGR+RGF FV M ++++ AI AL+G+ + GRA+ VN A+++
Sbjct: 63 IITDRDTGRARGFAFVEMENQSDAQAAIQALNGRQVGGRALTVNEAKEQ 111
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 25/102 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+++VGNLP+D D L LFE+ G +A+VK +I +
Sbjct: 32 RVYVGNLPFDTDEAALRTLFEEGGR-RVADVK------------------------IITD 66
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
R+T R+RGF FV M +A+ A++ + + GR LTVN+A
Sbjct: 67 RDTGRARGFAFVEMENQSDAQAAIQALNGRQVGGRALTVNEA 108
>gi|428170953|gb|EKX39874.1| hypothetical protein GUITHDRAFT_154318 [Guillardia theta CCMP2712]
Length = 270
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 97/210 (46%), Gaps = 41/210 (19%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
++F+G LP+ + + +FE G +E E+ +
Sbjct: 26 RVFLGGLPFKATEKDIKKMFESCGAIENIELPMN-------------------------- 59
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ---------PER 271
R GFGF+T + KAV M ++ GR + V +A GT+ P R
Sbjct: 60 -ADSRPAGFGFLTFKDADSVAKAVAM-DGQELMGRWVKVKEA--DGTEGSAGKKPFTPNR 115
Query: 272 APRVFEPGFR-IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
P+ G I++GNL W+VD + F++ G+VVN R DRETG +GFG V +
Sbjct: 116 EPKPKPDGCTTIFMGNLSWDVDEDTIRSFFADCGEVVNVRFATDRETGDFKGFGHVQF-A 174
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
E+ D A G+ + GRAIRV+ AEDR+
Sbjct: 175 ESSATDLAVAKGGEFVAGRAIRVDFAEDRK 204
>gi|385305976|gb|EIF49917.1| poly(a+) rna-binding protein [Dekkera bruxellensis AWRI1499]
Length = 439
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 90/208 (43%), Gaps = 45/208 (21%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FVGNLPY + L F G V A++ FH
Sbjct: 66 VFVGNLPYRTSWQDLKDCFRDVGEVLHADI--------MSFHGT---------------- 101
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP------------ 269
S+G G V ++ E A+KA+ MF R D GR + V + P T+
Sbjct: 102 ----SKGMGTVEFASRELAQKAIRMFDRTDFMGREIFVREDQPPPTERGEGRARGRGGRG 157
Query: 270 ----ERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 325
ER P GF +YVGNLP+ +N + +F G V +A V R GRSRGFG
Sbjct: 158 FDRFERRPLPAVDGFEVYVGNLPFTTNNEEFQDIFKNXGDVKSAEVRMGR-NGRSRGFGI 216
Query: 326 VTMSSETELNDAIAALDGQNLDGRAIRV 353
+ +E + I A DGQ +DGR I+V
Sbjct: 217 IIYGNEEDAKKTIEAFDGQVVDGRTIQV 244
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 47/219 (21%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+++VGNLP+ ++E+ +F+ G V+ AEV+ G G
Sbjct: 173 EVYVGNLPFTTNNEEFQDIFKNXGDVKSAEVRM----GRNG------------------- 209
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV-----NKAAP-------RGTQ 268
RSRGFG + E+A+K +E F +DGR + V +++AP R +
Sbjct: 210 ----RSRGFGIIIYGNEEDAKKTIEAFDGQVVDGRTIQVRSGRSSRSAPGADAGVRRDAE 265
Query: 269 PERAPRVFE-------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSR 321
P + PG ++V NLPWE + L +F VV A + YD + R
Sbjct: 266 PSKNTDXVRGVSGDGAPGATLFVSNLPWETTQSDLYDLFGSIATVVKAEIQYD-DRNRXS 324
Query: 322 GFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
G V + E +A+A LDG R + ++ A+ Q
Sbjct: 325 GNAVVELGDEEXXANALAQLDGYEYGNRDLHISYAKRLQ 363
>gi|168015710|ref|XP_001760393.1| predicted protein [Physcomitrella patens subsp. patens]
gi|21388658|dbj|BAC00785.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|76262794|gb|ABA41484.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|162688407|gb|EDQ74784.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W + RLE F G+VV ++V+ DRETGRSRGFGFVT + E +N AI
Sbjct: 7 FRCFVGGLAWATTDGRLEGAFRPFGEVVQSKVISDRETGRSRGFGFVTFADENSMNAAIK 66
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ LDGR I VN A+
Sbjct: 67 EMNGQELDGRNITVNQAQ 84
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+VI +RET RSRGFGFVT + A++ + ++DGR +TVN+A
Sbjct: 37 KVISDRETGRSRGFGFVTFADENSMNAAIKEMNGQELDGRNITVNQA 83
>gi|221508124|gb|EEE33711.1| splicing factor, putative [Toxoplasma gondii VEG]
Length = 576
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 33/206 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DA L++GNL VD + L LF + G V V L GN
Sbjct: 27 QDATLYIGNLDSQVDDDLLWELFVQCGPVRTVSVPRDKLTGNH----------------- 69
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+G+GFV +A+ A+++ + + G+ L +NK+A + R F+
Sbjct: 70 ---------QGYGFVEFRNEVDADYALKLMNMVKLYGKALRLNKSA-------QDRRNFD 113
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
G +++GNL +VD + FS G +++A+++ D ETG SRGFGFV+ + + A
Sbjct: 114 VGANVFLGNLDPDVDEKTIYDTFSAFGNIISAKIMRDPETGLSRGFGFVSFDTFEASDAA 173
Query: 338 IAALDGQNLDGRAIRVNVAEDRQRRS 363
+AA++GQ + R I V+ A + R
Sbjct: 174 LAAMNGQFICNRPIHVSYAYKKDTRG 199
>gi|326490373|dbj|BAJ84850.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 299
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 258 TVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRET 317
+ ++A G+ +A R +++VG + + D+ L FS +G+V A+V+ DRE+
Sbjct: 10 ALKRSAGSGSAMLQAVRSMSSS-KVFVGGISYGTDDQSLGDAFSNYGQVTEAKVIMDRES 68
Query: 318 GRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
GRSRGFGFVT +S E AI +DG++L GR +RV+ A DR R SF
Sbjct: 69 GRSRGFGFVTFTSSEEAGAAITGMDGKDLQGRIVRVSYAHDRGSRPSF 116
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 26/116 (22%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
V +K+FVG + Y D + L F G V A
Sbjct: 25 VRSMSSSKVFVGGISYGTDDQSLGDAFSNYGQVTEA------------------------ 60
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
+VI +RE+ RSRGFGFVT ++ EEA A+ D+ GR++ V+ A RG++P
Sbjct: 61 --KVIMDRESGRSRGFGFVTFTSSEEAGAAITGMDGKDLQGRIVRVSYAHDRGSRP 114
>gi|317027210|ref|XP_003188595.1| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 536
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 51/224 (22%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P A LFVGNL ++VD L FE FG +S +
Sbjct: 281 PGASANLFVGNLSWNVDEAWLQSEFES--------------FGE------------LSGV 314
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV 275
+++ R+T RSRGFG+V + +A KA E +IDGR++ ++ A R ++
Sbjct: 315 RIMTERDTGRSRGFGYVEYTNAVDAAKAFEAKKGAEIDGRVINLDYATGRPANKDQ---- 370
Query: 276 FEPGFR--------------------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDR 315
+ GF+ ++VGNLP++ + + ++F E G ++ R+ D
Sbjct: 371 -QGGFKDRANARARSFGDQASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDP 429
Query: 316 ETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
++GR +GFG+V SS E A L G +L GR +R++ + R
Sbjct: 430 DSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDFSTPR 473
>gi|317027208|ref|XP_001400395.2| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 539
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 51/224 (22%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P A LFVGNL ++VD L FE FG +S +
Sbjct: 284 PGASANLFVGNLSWNVDEAWLQSEFES--------------FGE------------LSGV 317
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV 275
+++ R+T RSRGFG+V + +A KA E +IDGR++ ++ A R ++
Sbjct: 318 RIMTERDTGRSRGFGYVEYTNAVDAAKAFEAKKGAEIDGRVINLDYATGRPANKDQ---- 373
Query: 276 FEPGFR--------------------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDR 315
+ GF+ ++VGNLP++ + + ++F E G ++ R+ D
Sbjct: 374 -QGGFKDRANARARSFGDQASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDP 432
Query: 316 ETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
++GR +GFG+V SS E A L G +L GR +R++ + R
Sbjct: 433 DSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDFSTPR 476
>gi|406831764|ref|ZP_11091358.1| RNP-1 like RNA-binding protein [Schlesneria paludicola DSM 18645]
Length = 122
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 58/80 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL + N LEQ+F++HG+V +A++V DR+TGRS+GFGFV M AI+A
Sbjct: 4 KLYVGNLSYNATNQTLEQMFAQHGEVRSAQIVTDRDTGRSKGFGFVEMGDSRSAEAAISA 63
Query: 341 LDGQNLDGRAIRVNVAEDRQ 360
L+GQ +DGRA+ VN A R+
Sbjct: 64 LNGQEVDGRALTVNEARPRE 83
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL Y+ ++ L +F + G V A Q++ +
Sbjct: 4 KLYVGNLSYNATNQTLEQMFAQHGEVRSA--------------------------QIVTD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
R+T RS+GFGFV M AE A+ + ++DGR LTVN+A PR
Sbjct: 38 RDTGRSKGFGFVEMGDSRSAEAAISALNGQEVDGRALTVNEARPR 82
>gi|134057335|emb|CAK44534.1| unnamed protein product [Aspergillus niger]
Length = 538
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 51/224 (22%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P A LFVGNL ++VD L FE FG +S +
Sbjct: 283 PGASANLFVGNLSWNVDEAWLQSEFES--------------FGE------------LSGV 316
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV 275
+++ R+T RSRGFG+V + +A KA E +IDGR++ ++ A R ++
Sbjct: 317 RIMTERDTGRSRGFGYVEYTNAVDAAKAFEAKKGAEIDGRVINLDYATGRPANKDQ---- 372
Query: 276 FEPGFR--------------------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDR 315
+ GF+ ++VGNLP++ + + ++F E G ++ R+ D
Sbjct: 373 -QGGFKDRANARARSFGDQASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDP 431
Query: 316 ETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
++GR +GFG+V SS E A L G +L GR +R++ + R
Sbjct: 432 DSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDFSTPR 475
>gi|346322022|gb|EGX91621.1| ribosome biogenesis protein Nop4 [Cordyceps militaris CM01]
Length = 818
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 38/208 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFV +LP +V +E LA F F V V+ ++
Sbjct: 44 LFVRSLPPNVTNESLAEFF--------------------------SEYFPVKHATVVVDQ 77
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR-------GTQPERAPR 274
+T SRGFGFVT++ ++A++A + + +GR + V A PR G + + P
Sbjct: 78 QTKESRGFGFVTLADADDAKQAQTVLDKKQWEGRSIRVEVAEPRQRKELAEGAERRQKPG 137
Query: 275 V--FEPGFRIYVGNLPWEVDNA-RLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
FEP ++ V NLPW + N+ +L +F +G++ A + D+ G+ +GFGFVT+ +
Sbjct: 138 KPEFEPTPKLIVRNLPWSIRNSEQLGHLFRSYGRIKFADLPKDK--GKLKGFGFVTLRGK 195
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDR 359
+A+ ++G+ +DGR + V+ A D+
Sbjct: 196 KNAENALEGVNGKEIDGRTLAVDWAVDK 223
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++V +LP V N L + FSE+ V +A VV D++T SRGFGFVT++ + A L
Sbjct: 44 LFVRSLPPNVTNESLAEFFSEYFPVKHATVVVDQQTKESRGFGFVTLADADDAKQAQTVL 103
Query: 342 DGQNLDGRAIRVNVAEDRQRR 362
D + +GR+IRV VAE RQR+
Sbjct: 104 DKKQWEGRSIRVEVAEPRQRK 124
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 38/145 (26%)
Query: 124 GEPEGEDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDV-DSEKLAMLFEK 182
EP + E ER+++ G+ EF P KL V NLP+ + +SE+L LF
Sbjct: 118 AEPRQRKELAEGAERRQKPGKP------EFEPTP---KLIVRNLPWSIRNSEQLGHLFRS 168
Query: 183 AGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEK 242
G ++ A++ ++ + +GFGFVT+ + AE
Sbjct: 169 YGRIKFADLP----------------------------KDKGKLKGFGFVTLRGKKNAEN 200
Query: 243 AVEMFHRYDIDGRLLTVNKAAPRGT 267
A+E + +IDGR L V+ A + T
Sbjct: 201 ALEGVNGKEIDGRTLAVDWAVDKST 225
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
I+V NLP+ ++ +L+ FS G + ARVV D+ T R G FV E DA A +
Sbjct: 319 IFVRNLPFTTNDEKLKSFFSSFGNIRYARVVMDKATDRPAGTAFVCF---FEGEDAKACI 375
Query: 342 DG 343
G
Sbjct: 376 KG 377
>gi|149921891|ref|ZP_01910335.1| RNA-binding protein [Plesiocystis pacifica SIR-1]
gi|149817244|gb|EDM76721.1| RNA-binding protein [Plesiocystis pacifica SIR-1]
Length = 189
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++VG LPW +DN RL++VF+E G + +ARV+ DRETGRSRGFGFVT E A+ L
Sbjct: 1 MFVGGLPWAMDNQRLKEVFAEFGALEDARVILDRETGRSRGFGFVTYVDEEGATKAL-GL 59
Query: 342 DGQNLDGRAIRVNVAEDRQ 360
DGQ +DGR IRV+ A++++
Sbjct: 60 DGQEVDGRRIRVDRAQEKE 78
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 27/101 (26%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FVG LP+ +D+++L +F + G +E A +VI +R
Sbjct: 1 MFVGGLPWAMDNQRLKEVFAEFGALEDA--------------------------RVILDR 34
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
ET RSRGFGFVT E A KA+ + + ++DGR + V++A
Sbjct: 35 ETGRSRGFGFVTYVDEEGATKALGLDGQ-EVDGRRIRVDRA 74
>gi|302679630|ref|XP_003029497.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
gi|300103187|gb|EFI94594.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
Length = 174
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 56/79 (70%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W + L Q FS G+V+++ V+ DRETGRSRGFGFVT SS E AI++
Sbjct: 4 KVYVGNLSWNTTDDTLRQAFSNFGQVLDSIVMRDRETGRSRGFGFVTFSSSGEAESAISS 63
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L+ Q LDGR I+VN+A R
Sbjct: 64 LNEQELDGRRIKVNLANAR 82
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K++VGNL ++ + L F G V + V+ +
Sbjct: 4 KVYVGNLSWNTTDDTLRQAFSNFGQVLDS--------------------------IVMRD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGFVT S+ EAE A+ + ++DGR + VN A R
Sbjct: 38 RETGRSRGFGFVTFSSSGEAESAISSLNEQELDGRRIKVNLANAR 82
>gi|6911142|gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Catharanthus roseus]
Length = 137
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W + L + FS++G+V+ ++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 FRCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMKDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ LDGR + VN A+
Sbjct: 68 GMNGQTLDGRNVTVNEAQ 85
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + + L+ F + G E+ E K +I +
Sbjct: 9 RCFVGGLAWATTDQSLSEAFSQYG--EVLESK------------------------IIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + + A+E + +DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFGDEKSMKDAIEGMNGQTLDGRNVTVNEA 84
>gi|354556704|ref|ZP_08975994.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
gi|353551316|gb|EHC20722.1| RNP-1 like RNA-binding protein [Cyanothece sp. ATCC 51472]
Length = 94
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 56/83 (67%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNL +EV LE+VF E+G V ++ DRETG+SRGFGFV M +ETE AI AL
Sbjct: 3 IYVGNLSYEVTQVDLEEVFGEYGTVKRVQIPSDRETGKSRGFGFVEMGTETEETAAIEAL 62
Query: 342 DGQNLDGRAIRVNVAEDRQRRSS 364
DG GRA++VN A R+ R S
Sbjct: 63 DGAEWMGRALKVNKARPRENRKS 85
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 48/104 (46%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNL Y+V L +F + GTV+ +Q+ +R
Sbjct: 3 IYVGNLSYEVTQVDLEEVFGEYGTVK--------------------------RVQIPSDR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET +SRGFGFV M T E A+E + GR L VNKA PR
Sbjct: 37 ETGKSRGFGFVEMGTETEETAAIEALDGAEWMGRALKVNKARPR 80
>gi|149240785|ref|XP_001526223.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450346|gb|EDK44602.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 601
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 80/136 (58%), Gaps = 11/136 (8%)
Query: 229 FGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-----KAAPRGTQPERAPRVFEPGFRIY 283
+ F+ + E+AEKA+ + D++G + VN A G+ PE EP + I+
Sbjct: 143 YAFIEFNESEDAEKALNSLNGKDVNGSDIKVNWAYQSAAIAGGSTPE------EPSYNIF 196
Query: 284 VGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDG 343
VG+L EV++ L++ F++ G + A V++D +T RSRG+GFVT + + +A+ +++G
Sbjct: 197 VGDLSSEVNDEALKKAFTKFGSLKQAHVMWDMQTSRSRGYGFVTFGKQEDAENALQSMNG 256
Query: 344 QNLDGRAIRVNVAEDR 359
+ L GRAIR N A +
Sbjct: 257 EWLGGRAIRCNWASHK 272
>gi|172038014|ref|YP_001804515.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
gi|171699468|gb|ACB52449.1| RNA-binding protein [Cyanothece sp. ATCC 51142]
Length = 108
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 56/83 (67%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNL +EV LE+VF E+G V ++ DRETG+SRGFGFV M +ETE AI AL
Sbjct: 17 IYVGNLSYEVTQVDLEEVFGEYGTVKRVQIPSDRETGKSRGFGFVEMGTETEETAAIEAL 76
Query: 342 DGQNLDGRAIRVNVAEDRQRRSS 364
DG GRA++VN A R+ R S
Sbjct: 77 DGAEWMGRALKVNKARPRENRKS 99
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 48/104 (46%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNL Y+V L +F + GTV+ +Q+ +R
Sbjct: 17 IYVGNLSYEVTQVDLEEVFGEYGTVK--------------------------RVQIPSDR 50
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET +SRGFGFV M T E A+E + GR L VNKA PR
Sbjct: 51 ETGKSRGFGFVEMGTETEETAAIEALDGAEWMGRALKVNKARPR 94
>gi|58269650|ref|XP_571981.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134113905|ref|XP_774200.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256835|gb|EAL19553.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228217|gb|AAW44674.1| glycine-rich RNA binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 161
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 54/79 (68%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W + L QVFS +G V + V+ DRETGRSRGFGFVT S E AIAA
Sbjct: 5 KVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAA 64
Query: 341 LDGQNLDGRAIRVNVAEDR 359
++ Q LDGR +RVN+A R
Sbjct: 65 MNEQELDGRRVRVNMANSR 83
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+K++VGNL ++ + L +F GTV + V+
Sbjct: 4 SKVYVGNLSWNSTDDTLLQVFSAYGTV--------------------------TDCIVMK 37
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RSRGFGFVT + +EAE A+ + ++DGR + VN A R
Sbjct: 38 DRETGRSRGFGFVTYGSPQEAEAAIAAMNEQELDGRRVRVNMANSR 83
>gi|359688008|ref|ZP_09258009.1| RNP-1 like RNA-binding protein [Leptospira licerasiae serovar
Varillal str. MMD0835]
Length = 100
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 56/81 (69%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W + L QVF HG + A +V DRETGRSRGFGFVT ++ N A++
Sbjct: 4 KLFVGGLSWSTTDLTLRQVFETHGAIQEANIVVDRETGRSRGFGFVTFVDQSSANAAVSE 63
Query: 341 LDGQNLDGRAIRVNVAEDRQR 361
L+G++LDGR I V+VAED+ R
Sbjct: 64 LNGKDLDGRNIVVSVAEDKSR 84
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 44/103 (42%), Gaps = 26/103 (25%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLFVG L + L +FE G ++ A ++
Sbjct: 3 SKLFVGGLSWSTTDLTLRQVFETHGAIQEA--------------------------NIVV 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+RET RSRGFGFVT A AV + D+DGR + V+ A
Sbjct: 37 DRETGRSRGFGFVTFVDQSSANAAVSELNGKDLDGRNIVVSVA 79
>gi|296121725|ref|YP_003629503.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM 3776]
gi|296014065|gb|ADG67304.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM 3776]
Length = 104
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 62/82 (75%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNL ++V+N+ LEQ+FS G+V +A+VV DRETGRS+GFGFV +DAI
Sbjct: 2 GTKLYVGNLTYDVNNSGLEQLFSSFGEVRSAQVVMDRETGRSKGFGFVEFGDSQSASDAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQ 360
A++G++++GRA+ VN A R+
Sbjct: 62 NAMNGKDVNGRALTVNEARPRE 83
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL YDV++ L LF G V A QV+ +
Sbjct: 4 KLYVGNLTYDVNNSGLEQLFSSFGEVRSA--------------------------QVVMD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RS+GFGFV + A A+ + D++GR LTVN+A PR
Sbjct: 38 RETGRSKGFGFVEFGDSQSASDAINAMNGKDVNGRALTVNEARPR 82
>gi|321260943|ref|XP_003195191.1| glycine-rich RNA binding protein [Cryptococcus gattii WM276]
gi|317461664|gb|ADV23404.1| Glycine-rich RNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 177
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 54/79 (68%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W + L QVFS +G V + V+ DRETGRSRGFGFVT S E AIAA
Sbjct: 5 KVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAA 64
Query: 341 LDGQNLDGRAIRVNVAEDR 359
++ Q LDGR +RVN+A R
Sbjct: 65 MNEQELDGRRVRVNMANSR 83
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+K++VGNL ++ + L +F GTV + V+
Sbjct: 4 SKVYVGNLSWNSTDDTLLQVFSAYGTV--------------------------TDCIVMK 37
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RSRGFGFVT + +EAE A+ + ++DGR + VN A R
Sbjct: 38 DRETGRSRGFGFVTYGSPQEAEAAIAAMNEQELDGRRVRVNMANSR 83
>gi|58269652|ref|XP_571982.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228218|gb|AAW44675.1| glycine-rich RNA binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 182
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 54/79 (68%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W + L QVFS +G V + V+ DRETGRSRGFGFVT S E AIAA
Sbjct: 5 KVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAA 64
Query: 341 LDGQNLDGRAIRVNVAEDR 359
++ Q LDGR +RVN+A R
Sbjct: 65 MNEQELDGRRVRVNMANSR 83
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+K++VGNL ++ + L +F GTV + V+
Sbjct: 4 SKVYVGNLSWNSTDDTLLQVFSAYGTV--------------------------TDCIVMK 37
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RSRGFGFVT + +EAE A+ + ++DGR + VN A R
Sbjct: 38 DRETGRSRGFGFVTYGSPQEAEAAIAAMNEQELDGRRVRVNMANSR 83
>gi|358367745|dbj|GAA84363.1| hypothetical protein AKAW_02478 [Aspergillus kawachii IFO 4308]
Length = 546
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 51/224 (22%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P A LFVGNL ++VD L FE FG +S +
Sbjct: 291 PGASANLFVGNLSWNVDEAWLQSEFES--------------FGE------------LSGV 324
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV 275
+++ R+T RSRGFG+V + +A KA E +IDGR++ ++ A R ++
Sbjct: 325 RIMTERDTGRSRGFGYVEYTNAVDAAKAFEAKKGAEIDGRVINLDYATGRPANKDQ---- 380
Query: 276 FEPGFR--------------------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDR 315
+ GF+ ++VGNLP++ + + ++F E G ++ R+ D
Sbjct: 381 -QGGFKDRANARARSFGDQASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDP 439
Query: 316 ETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
++GR +GFG+V SS E A L G +L GR +R++ + R
Sbjct: 440 DSGRPKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDFSTPR 483
>gi|2366750|dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
gi|295393569|gb|ADG03640.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931789|gb|AFP57444.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
gi|399931793|gb|AFP57446.1| RNA-binding glycine-rich protein [Nicotiana acuminata]
gi|399931795|gb|AFP57447.1| RNA-binding glycine-rich protein [Nicotiana alata]
gi|399931809|gb|AFP57454.1| RNA-binding glycine-rich protein [Nicotiana sylvestris]
Length = 144
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 57/82 (69%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W D+ L F+ G VV+ARV+ DR++GRSRGFGFV S + N+AI A
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKA 98
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
+DGQ L GR IRV++A++R R
Sbjct: 99 MDGQELQGRNIRVSIAQERAPR 120
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 49/114 (42%), Gaps = 32/114 (28%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG L + D + L F G V A +VI +
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDA--------------------------RVIVD 72
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
R++ RSRGFGFV S E A +A++ ++ GR + V+ A ERAPR
Sbjct: 73 RDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIA------QERAPR 120
>gi|302756609|ref|XP_002961728.1| hypothetical protein SELMODRAFT_140819 [Selaginella moellendorffii]
gi|300170387|gb|EFJ36988.1| hypothetical protein SELMODRAFT_140819 [Selaginella moellendorffii]
Length = 130
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G L W VD+ L F+ +G+V ARV+ DRETGRSRGFGFVT ++ E A+
Sbjct: 11 KLFIGGLAWGVDDGTLRTAFANYGEVTEARVIMDRETGRSRGFGFVTFENDNEAKAAVQG 70
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG L GR+IRV+ A DR
Sbjct: 71 MDGHELGGRSIRVDYASDR 89
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 26/112 (23%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLF+G L + VD L F G E+ E + VI
Sbjct: 10 SKLFIGGLAWGVDDGTLRTAFANYG--EVTEAR------------------------VIM 43
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+RET RSRGFGFVT EA+ AV+ +++ GR + V+ A+ R + P +
Sbjct: 44 DRETGRSRGFGFVTFENDNEAKAAVQGMDGHELGGRSIRVDYASDRPSAPRQ 95
>gi|412986331|emb|CCO14757.1| predicted protein [Bathycoccus prasinos]
Length = 290
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 30/218 (13%)
Query: 142 SGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQG 201
SG V E E + +VGNL ++ D + L E T+ G
Sbjct: 95 SGGAPVQRPTNLPEAEEGCRCYVGNLAWETDEQ---ALIEHCQTI--------------G 137
Query: 202 FHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNK 261
+ C V S RS+G+ + ++ E A+ V+ H + R + V
Sbjct: 138 HPVLRCEVARQS---------GGRSKGWALIDFASKEAADAGVKALHDTECRARSIIVRA 188
Query: 262 AAPRGTQPERAPRVFEP----GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRET 317
P G + PR P G +I V NLPW + L QVF + G VV+A+ +T
Sbjct: 189 ERPGGAAATKPPREIRPENSSGLQIVVRNLPWSTTSDDLRQVFQQVGTVVDAKSTCHDDT 248
Query: 318 GRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 355
GRS+G+G V ++ + AIA +G L+GR +++ +
Sbjct: 249 GRSKGWGTVLFETQEQAQAAIAGFNGVELEGRPMQIKI 286
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 91/219 (41%), Gaps = 54/219 (24%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
E P+ +L+VGN+P+ E+L LF A +EI G Q
Sbjct: 3 TEQPQSNRLYVGNIPWSTTVEELQGLFTDAENIEIPT-------GRQ------------- 42
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN---------KAAP 264
+RSRG+ V+ S A+ A++ + + + R ++V K++
Sbjct: 43 ----------NRSRGYALVSFSDESAAQSAMQAMNGHALGDRNISVRADNPLPKAPKSSS 92
Query: 265 RGT------QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARV----VYD 314
RG+ +P P E G R YVGNL WE D EQ EH + + V V
Sbjct: 93 RGSGGAPVQRPTNLPEA-EEGCRCYVGNLAWETD----EQALIEHCQTIGHPVLRCEVAR 147
Query: 315 RETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 353
+ GRS+G+ + +S+ + + AL R+I V
Sbjct: 148 QSGGRSKGWALIDFASKEAADAGVKALHDTECRARSIIV 186
>gi|357465131|ref|XP_003602847.1| Multiple RNA-binding domain-containing protein [Medicago
truncatula]
gi|355491895|gb|AES73098.1| Multiple RNA-binding domain-containing protein [Medicago
truncatula]
Length = 290
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 36/198 (18%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+L N+P+ +E + LFEK G V E+ +YN
Sbjct: 90 RLLAQNVPWSSTTEDVRSLFEKYGKVLHVELS-------------------------MYN 124
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP----ERAPRVF 276
+ +R+RG FV M + EEA +A+ Y+ DGR++ + A P+ + ER P +
Sbjct: 125 K--NRNRGLAFVEMGSPEEASEALNSLQSYEFDGRIINIQYAKPKKEKIPPPVERKPITY 182
Query: 277 EPGFRIYVGNLPWEVDNARLEQVF-SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
++V N P+E + +++ F S GKVV+A V++ R G+GFV+ S+ E +
Sbjct: 183 N----LFVANFPYEARSKDVKEFFDSGTGKVVSAEVIFHENPRRPSGYGFVSYKSKKEAD 238
Query: 336 DAIAALDGQNLDGRAIRV 353
+A+A G+N GR +RV
Sbjct: 239 EALAEFQGKNFMGRPLRV 256
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARV-VYDRETGRSRGFGFVTMSSETELNDAIA 339
R+ N+PW + +F ++GKV++ + +Y++ R+RG FV M S E ++A+
Sbjct: 90 RLLAQNVPWSSTTEDVRSLFEKYGKVLHVELSMYNK--NRNRGLAFVEMGSPEEASEALN 147
Query: 340 ALDGQNLDGRAIRVNVA 356
+L DGR I + A
Sbjct: 148 SLQSYEFDGRIINIQYA 164
>gi|449507320|ref|XP_004162998.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 139
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 54/78 (69%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W D+ LE+ FS +G++V A++V DRETGRSRGFGFVT E + AI
Sbjct: 8 FRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
A++G LDGR I VN A+
Sbjct: 68 AMNGHILDGRNITVNEAQ 85
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + DS L F G EI E K ++ +
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYG--EIVEAK------------------------IVSD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT E A+E + + +DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEA 84
>gi|449462238|ref|XP_004148848.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507318|ref|XP_004162997.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 141
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 54/78 (69%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W D+ LE+ FS +G++V A++V DRETGRSRGFGFVT E + AI
Sbjct: 8 FRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
A++G LDGR I VN A+
Sbjct: 68 AMNGHILDGRNITVNEAQ 85
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + DS L F G EI E K ++ +
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYG--EIVEAK------------------------IVSD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT E A+E + + +DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEA 84
>gi|449462236|ref|XP_004148847.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507315|ref|XP_004162996.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 144
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 54/78 (69%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W D+ LE+ FS +G++V A++V DRETGRSRGFGFVT E + AI
Sbjct: 8 FRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
A++G LDGR I VN A+
Sbjct: 68 AMNGHILDGRNITVNEAQ 85
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + DS L F G EI E K ++ +
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYG--EIVEAK------------------------IVSD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT E A+E + + +DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEA 84
>gi|449462234|ref|XP_004148846.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 156
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 54/78 (69%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W D+ LE+ FS +G++V A++V DRETGRSRGFGFVT E + AI
Sbjct: 8 FRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
A++G LDGR I VN A+
Sbjct: 68 AMNGHILDGRNITVNEAQ 85
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + DS L F G EI E K ++ +
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYG--EIVEAK------------------------IVSD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT E A+E + + +DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEA 84
>gi|449462232|ref|XP_004148845.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507311|ref|XP_004162995.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 171
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 54/78 (69%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W D+ LE+ FS +G++V A++V DRETGRSRGFGFVT E + AI
Sbjct: 8 FRCFVGGLAWATDSNSLEKAFSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
A++G LDGR I VN A+
Sbjct: 68 AMNGHILDGRNITVNEAQ 85
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + DS L F G EI E K ++ +
Sbjct: 9 RCFVGGLAWATDSNSLEKAFSVYG--EIVEAK------------------------IVSD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT E A+E + + +DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEA 84
>gi|255945479|ref|XP_002563507.1| Pc20g10130 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588242|emb|CAP86342.1| Pc20g10130 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 95
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/79 (58%), Positives = 56/79 (70%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+IYVGNL W + L Q F E G++V++ V+ DRETGRSRGFGFVT SS E AI A
Sbjct: 3 KIYVGNLSWHTSDESLRQAFGEFGQIVDSIVMVDRETGRSRGFGFVTYSSAEEAEAAINA 62
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L+ Q+LDGR IRVN+A R
Sbjct: 63 LNEQDLDGRRIRVNLANAR 81
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 26/108 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+K++VGNL + E L F + G + V ++ V+
Sbjct: 2 SKIYVGNLSWHTSDESLRQAFGEFGQI-------------------VDSI-------VMV 35
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT 267
+RET RSRGFGFVT S+ EEAE A+ + D+DGR + VN A R T
Sbjct: 36 DRETGRSRGFGFVTYSSAEEAEAAINALNEQDLDGRRIRVNLANARPT 83
>gi|59802519|gb|AAX07503.1| unknown [Gemmata sp. Wa1-1]
Length = 122
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
Query: 261 KAAPRG-----TQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDR 315
+A PRG +RA F G ++YVGNL W V +++L+ +F+ +G VV+A+V+ DR
Sbjct: 16 RAVPRGKLIQAAAGDRAAGEFVVGKKLYVGNLSWGVTDSQLQDMFTPYGSVVSAQVIMDR 75
Query: 316 ETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
+TGRS+GFGFV M ++ E AI + GQ ++GR + VN A ++
Sbjct: 76 DTGRSKGFGFVEMGTDQEAQAAITGMHGQVIEGRPLTVNEARPKK 120
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 53/105 (50%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL + V +L +F G+V A QVI +
Sbjct: 41 KLYVGNLSWGVTDSQLQDMFTPYGSVVSA--------------------------QVIMD 74
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
R+T RS+GFGFV M T +EA+ A+ H I+GR LTVN+A P+
Sbjct: 75 RDTGRSKGFGFVEMGTDQEAQAAITGMHGQVIEGRPLTVNEARPK 119
>gi|322708692|gb|EFZ00269.1| cutinase negative acting protein [Metarhizium anisopliae ARSEF 23]
Length = 509
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 111/235 (47%), Gaps = 47/235 (20%)
Query: 150 EEEFVEPPEDAK------LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFH 203
+EE P+ AK LF GNL +++D LA F++ F L G
Sbjct: 244 DEEIDATPKKAKTEGAPTLFAGNLSWNIDDNALAEAFKE----------FEGLVG----- 288
Query: 204 MWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA 263
+V+ +R+ RSRGFG+V T E A KA E +++DGR L ++ A
Sbjct: 289 -----------ARVVTDRDGGRSRGFGYVDFETPEAATKAYEAMQGFELDGRPLNLDYAN 337
Query: 264 -------PRGTQPERAPR----VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVV 312
PR +RA + V +++GNLP++ D + Q F+E +V + R+
Sbjct: 338 TRPAESNPRDRATDRAKKHGDSVSPESETLFIGNLPFDTDQETVRQFFAEVAEVTSVRLP 397
Query: 313 YDRETGRSRGFGFVTMSSETELNDAIAALDGQNLD----GRAIRVNVAEDRQRRS 363
D ++G +GFG+V+ +S + L+G +L R++R++ A R ++S
Sbjct: 398 TDPDSGNLKGFGYVSFNSVEDAKTVFQQLNGASLGNGRMSRSVRLDFASSRPQQS 452
>gi|219848507|ref|YP_002462940.1| RNP-1 like RNA-binding protein [Chloroflexus aggregans DSM 9485]
gi|219542766|gb|ACL24504.1| RNP-1 like RNA-binding protein [Chloroflexus aggregans DSM 9485]
Length = 103
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VGNL W VD+A LEQ F +G V +ARV+ DRETGRSRGFGFV M T++ I+
Sbjct: 4 KLFVGNLAWSVDDATLEQFFQAYGDVRSARVINDRETGRSRGFGFVEMDV-TDVAKVISQ 62
Query: 341 LDGQNLDGRAIRVNVAEDRQRRS 363
+GQ ++GR IRVN AED+ R
Sbjct: 63 TNGQPINGREIRVNEAEDKGSRG 85
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 50/109 (45%), Gaps = 27/109 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
KLFVGNL + VD L F+ G V A +VI
Sbjct: 3 VKLFVGNLAWSVDDATLEQFFQAYGDVRSA--------------------------RVIN 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ 268
+RET RSRGFGFV M V + K + + I+GR + VN+A +G++
Sbjct: 37 DRETGRSRGFGFVEMD-VTDVAKVISQTNGQPINGREIRVNEAEDKGSR 84
>gi|221065733|ref|ZP_03541838.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|264678761|ref|YP_003278668.1| RNA-binding region RNP-1 [Comamonas testosteroni CNB-2]
gi|220710756|gb|EED66124.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|262209274|gb|ACY33372.1| RNA-binding region RNP-1 [Comamonas testosteroni CNB-2]
Length = 113
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 59/85 (69%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+IYVGNLP+ V ++ L F+E G V +A+V+ DRETGRS+GF FV M+S E AI+
Sbjct: 4 KIYVGNLPYSVTDSSLRSNFAEFGTVTSAKVMMDRETGRSKGFAFVEMTSADECQAAISG 63
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSSF 365
L G ++DGR+I VN+A+ R+ F
Sbjct: 64 LHGMSVDGRSIVVNLAKPREEGRGF 88
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K++VGNLPY V L F + GTV A +V+ +
Sbjct: 4 KIYVGNLPYSVTDSSLRSNFAEFGTVTSA--------------------------KVMMD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RS+GF FV M++ +E + A+ H +DGR + VN A PR
Sbjct: 38 RETGRSKGFAFVEMTSADECQAAISGLHGMSVDGRSIVVNLAKPR 82
>gi|449436976|ref|XP_004136268.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
gi|449497014|ref|XP_004160289.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 300
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 34/211 (16%)
Query: 150 EEEFVEPPEDA------KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFH 203
++E V P D +L N+P+D E + LFEK GTV E+
Sbjct: 83 QDEAVSSPSDTEEFSQTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELS----------- 131
Query: 204 MWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA 263
+YN+ R+RG FVTM + EEA A+ Y+ +GR L +N A
Sbjct: 132 --------------MYNK--IRNRGLAFVTMGSPEEALAALNNLESYEFEGRTLRLNYAK 175
Query: 264 PRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF-SEHGKVVNARVVYDRETGRSRG 322
+ +P + F ++V NLP++ L++ F S G VV+A+++++ RS G
Sbjct: 176 LKKEKPSPPVKPKPVTFNLFVANLPFDARAKDLKEFFDSGSGNVVSAQIIFNENPRRSSG 235
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRV 353
+GFV ++ + AI+ G+ GR++RV
Sbjct: 236 YGFVAFKTKKDAEAAISEFQGKTFMGRSLRV 266
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARV-VYDRETGRSRGFGFVTMSSETELNDAIA 339
R+ N+PW+ + +F ++G V++ + +Y++ R+RG FVTM S E A+
Sbjct: 100 RLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKI--RNRGLAFVTMGSPEEALAALN 157
Query: 340 ALDGQNLDGRAIRVNVAE 357
L+ +GR +R+N A+
Sbjct: 158 NLESYEFEGRTLRLNYAK 175
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 25/101 (24%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFV NLP+D ++ L F+ GN V Q+I+N
Sbjct: 194 LFVANLPFDARAKDLKEFFDSGS-------------GN------------VVSAQIIFNE 228
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RS G+GFV T ++AE A+ F GR L V ++
Sbjct: 229 NPRRSSGYGFVAFKTKKDAEAAISEFQGKTFMGRSLRVARS 269
>gi|226532482|ref|NP_001150574.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640298|gb|ACG39617.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 253
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 58/79 (73%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L + D+ L F+++G+V+ A+++ DRE+GRSRGFGF+T +S E + AI A
Sbjct: 35 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASAAITA 94
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG+ LDGR IRVN A +R
Sbjct: 95 MDGKTLDGRNIRVNHANER 113
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLFVG L Y D L F K G ++ E K +I
Sbjct: 34 SKLFVGGLSYGTDDHSLRDEFAKYG--QVIEAK------------------------IIL 67
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RE+ RSRGFGF+T ++ EEA A+ +DGR + VN A R
Sbjct: 68 DRESGRSRGFGFITYTSSEEASAAITAMDGKTLDGRNIRVNHANER 113
>gi|194753367|ref|XP_001958985.1| GF12652 [Drosophila ananassae]
gi|190620283|gb|EDV35807.1| GF12652 [Drosophila ananassae]
Length = 639
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 43/222 (19%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
E AKLF V N D D EKL FE G + +V
Sbjct: 177 EKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKV---------------------- 214
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERA 272
++E +S+GFGFV T E AE AV+ + D+ +G+ L V +A + + +
Sbjct: 215 -----MSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQEL 269
Query: 273 PRVFEP----------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
R FE G +YV NL +D+ RL + FS +G + +A+V+ D E GRS+G
Sbjct: 270 KRKFEELKKKRHDSAFGVNLYVKNLDDSIDDERLCKEFSPYGTITSAKVMTDEE-GRSKG 328
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
FGFV S E A+ L+G+ + + + V +A+ ++ R +
Sbjct: 329 FGFVCFISANEATCAVTELNGRVVGSKPLYVALAQRKEERKA 370
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
E S+G+GFV T E A +++ + ++G+ + V K PR + + +
Sbjct: 125 EKANSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTN 184
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YV N + D+ +L++ F +GK+ + +V+ +E G+S+GFGFV + A+ AL
Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQAL 243
Query: 342 DGQNL-DGRAIRVNVAEDRQRR 362
+G+++ +G+++ V A+ + R
Sbjct: 244 NGKDMGEGKSLYVARAQKKAER 265
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 35/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L D++ L F AG V + VC + +
Sbjct: 2 ASLYVGDLHQDINESNLFDKFSSAGPV---------------LSIRVC--------RDVM 38
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+R RS G+ +V +AE+A++ + +D L NK R +R P + G
Sbjct: 39 SR---RSLGYAYVNFQQPADAERALDTMN-FD-----LLRNKPI-RIMWSQRDPSLRRSG 88
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN + FS G +++ +V D E S+G+GFV +E N +I
Sbjct: 89 VGNVFIKNLDKTIDNKAIYDTFSAFGNILSCKVATD-EKANSKGYGFVHFETEEAANTSI 147
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+G+ + V R+ R
Sbjct: 148 DKVNGMLLNGKKVYVGKFIPRKER 171
>gi|388858327|emb|CCF48115.1| related to glycine-rich RNA-binding protein [Ustilago hordei]
Length = 193
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 56/79 (70%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W + L FS +G++ + V+ DRETGRSRGFGFVT +++ E + AIAA
Sbjct: 4 KVYVGNLSWNTTDDSLAHAFSAYGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAAIAA 63
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L+ Q LDGR IRVN+A R
Sbjct: 64 LNEQELDGRRIRVNMANSR 82
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
AK++VGNL ++ + LA F G + Y+ V+
Sbjct: 3 AKVYVGNLSWNTTDDSLAHAFSAYGQLTD----------------------YI----VMK 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RSRGFGFVT +T EA+ A+ + ++DGR + VN A R
Sbjct: 37 DRETGRSRGFGFVTFATQGEADAAIAALNEQELDGRRIRVNMANSR 82
>gi|222112647|ref|YP_002554911.1| rnp-1 like RNA-binding protein [Acidovorax ebreus TPSY]
gi|221732091|gb|ACM34911.1| RNP-1 like RNA-binding protein [Acidovorax ebreus TPSY]
Length = 155
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 60/84 (71%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + LEQ FS+ G V +A+V+ +R+TGRS+GFGFV M S+ E +AI
Sbjct: 2 GNKLYVGNLPYSVRDQDLEQAFSQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQEAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ+L GR+I VN A + R
Sbjct: 62 NGMNGQSLGGRSIVVNEARPMEAR 85
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 26/109 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V + L F + G V A +V+
Sbjct: 4 KLYVGNLPYSVRDQDLEQAFSQFGAVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
R+T RS+GFGFV M + EA++A+ + + GR + VN+A P +P
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQEAINGMNGQSLGGRSIVVNEARPMEARP 86
>gi|226492336|ref|NP_001150253.1| ribonucleoprotein [Zea mays]
gi|195637832|gb|ACG38384.1| ribonucleoprotein [Zea mays]
Length = 275
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 30/196 (15%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+L N+P+D ++++ LFE G+V E+ +
Sbjct: 72 RLVAQNIPWDCTADEMRALFESHGSVVGVELSMY-------------------------- 105
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP-- 278
+++RG FVTM + EEA A+ + ++ R + V+ A PR QP++ V +
Sbjct: 106 -SANKNRGLAFVTMGSEEEALAALTHLNSTILNDRKIKVDFARPRKKQPKQPAVVSDATE 164
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG-RSRGFGFVTMSSETELNDA 337
+ ++VGNL W V N L ++F+ VV+A V++ T RS G+ FV+ SS+ A
Sbjct: 165 KYVVFVGNLTWRVRNRHLRELFASAPGVVSAEVIFHTTTPRRSAGYAFVSFSSKESAGAA 224
Query: 338 IAALDGQNLDGRAIRV 353
I+A +G+ L GR I V
Sbjct: 225 ISAFNGKILMGRPINV 240
>gi|354544201|emb|CCE40924.1| hypothetical protein CPAR2_109610 [Candida parapsilosis]
Length = 475
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 34/210 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E A +F G L +++D + L FE L G G +V
Sbjct: 233 EPATVFAGRLSWNIDDDWLKREFE-------------HLEGVIG-------------ARV 266
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRL--LTVNKAAPRGTQP--ERAP 273
I R T +SRG+G+V ++ AEKA+E +IDGR L ++ P T+P +RA
Sbjct: 267 IMERATGKSRGYGYVDFTSKAAAEKAIEEMQGREIDGRPINLDLSTGRPHATKPNNDRAK 326
Query: 274 RVFE----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
+ + P +++GNL + + +L ++F E+G V++ R+ +T + +GFG+V
Sbjct: 327 QFGDQQSPPSDTLFIGNLSFNANRDKLFEIFGEYGNVISCRLPTHPDTQQPKGFGYVQFG 386
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAEDR 359
S E A+ AL+G+ L+GR R++ + R
Sbjct: 387 SVDEAKAALEALNGEYLEGRPCRLDFSAPR 416
>gi|160899081|ref|YP_001564663.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333914782|ref|YP_004488514.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|160364665|gb|ABX36278.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333744982|gb|AEF90159.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 115
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 57/80 (71%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+IYVGNLP+ V ++ LE F+E G V +A+V+ DRETGRS+GFGFV M+S AI
Sbjct: 4 KIYVGNLPYSVTDSSLESNFAEFGNVASAKVMMDRETGRSKGFGFVEMASAEVAQAAITG 63
Query: 341 LDGQNLDGRAIRVNVAEDRQ 360
L G ++DGR+I VN+A R+
Sbjct: 64 LHGMSVDGRSIVVNLARPRE 83
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K++VGNLPY V L F + FGN V+ +V+ +
Sbjct: 4 KIYVGNLPYSVTDSSLESNFAE--------------FGN------------VASAKVMMD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RS+GFGFV M++ E A+ A+ H +DGR + VN A PR
Sbjct: 38 RETGRSKGFGFVEMASAEVAQAAITGLHGMSVDGRSIVVNLARPR 82
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 31/207 (14%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E +++VG L ++VD+E L E G V A V+
Sbjct: 201 ETNQIWVGQLSWNVDNEWLKSEMEAFGEVTSARVQL------------------------ 236
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+R T +SRGFG+V +T A+KA E ++DGR + ++ + P+G + + F
Sbjct: 237 --DRTTGKSRGFGYVDFATAAAAKKAFEEGQGKEVDGRAIRIDLSTPKGDVTDNRAKKFN 294
Query: 278 -----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
P +++GNL +++ + FSEHG+V R+ D ++GR +GFG+V +++
Sbjct: 295 DQRSAPSSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQE 354
Query: 333 ELNDAIAALDGQNLDGRAIRVNVAEDR 359
AI A+ GQ L GR +R++ + R
Sbjct: 355 SAQAAIDAMTGQELAGRPLRLDFSTPR 381
>gi|121596409|ref|YP_988305.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
gi|120608489|gb|ABM44229.1| RNP-1 like RNA-binding protein [Acidovorax sp. JS42]
Length = 149
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 60/84 (71%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + LEQ FS+ G V +A+V+ +R+TGRS+GFGFV M S+ E +AI
Sbjct: 2 GNKLYVGNLPYSVRDQDLEQAFSQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQEAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ+L GR+I VN A + R
Sbjct: 62 NGMNGQSLGGRSIVVNEARPMEAR 85
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 26/112 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V + L F + G V A +V+
Sbjct: 4 KLYVGNLPYSVRDQDLEQAFSQFGAVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 272
R+T RS+GFGFV M + EA++A+ + + GR + VN+A P +P R+
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQEAINGMNGQSLGGRSIVVNEARPMEARPPRS 89
>gi|170098488|ref|XP_001880463.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644901|gb|EDR09150.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 154
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 56/79 (70%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W + L Q FSE G+V+++ V+ DR+TGRSRGFGFVT SS E + AI
Sbjct: 4 KVYVGNLSWNTTDDTLRQAFSEFGQVLDSIVMRDRDTGRSRGFGFVTFSSGQEADAAIGG 63
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L+ Q LDGR I+VN+A R
Sbjct: 64 LNEQELDGRRIKVNLANAR 82
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
AK++VGNL ++ + L F + G V + V+
Sbjct: 3 AKVYVGNLSWNTTDDTLRQAFSEFGQVLDS--------------------------IVMR 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+R+T RSRGFGFVT S+ +EA+ A+ + ++DGR + VN A R
Sbjct: 37 DRDTGRSRGFGFVTFSSGQEADAAIGGLNEQELDGRRIKVNLANAR 82
>gi|407918628|gb|EKG11897.1| hypothetical protein MPH_10939 [Macrophomina phaseolina MS6]
Length = 519
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 38/209 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFVGNL ++VD E L FE+ F ++++ +R
Sbjct: 269 LFVGNLSWNVDEEWLGREFEE---------------------------FGPKAVRIVTDR 301
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR--GTQP-ERAP-RVFE 277
T RS+GFG+V TVE A A+ D+D R L ++ + PR G P +RA R +
Sbjct: 302 ATGRSKGFGYVEFETVEAATAALNAKKGTDLDNRPLNLDFSTPRPEGQNPRDRASSRASQ 361
Query: 278 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
P ++VGNL ++ + ++F E+G + + E G +GFG+V SS
Sbjct: 362 HGDVPSRPSDTLFVGNLSFDATPDSVTEIFQEYGTITRVSLPTKPEDGMPKGFGYVGFSS 421
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDR 359
E A AL G L+GR++R++ A R
Sbjct: 422 VEEAQGAFEALQGAELNGRSMRLDFAAPR 450
>gi|388567211|ref|ZP_10153648.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
gi|388265594|gb|EIK91147.1| putative RNA-binding protein rbpB [Hydrogenophaga sp. PBC]
Length = 97
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 59/80 (73%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNLP+ V++ L FSE G V +A+V+ DR++GRS+GFGFV M+SE E AI
Sbjct: 4 KLYVGNLPYSVNDDSLRHNFSEFGNVASAKVMTDRDSGRSKGFGFVEMASEAEAQAAING 63
Query: 341 LDGQNLDGRAIRVNVAEDRQ 360
L+GQ++DGR I VNV+ ++
Sbjct: 64 LNGQSVDGRQIVVNVSRPKE 83
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KL+VGNLPY V+ + L F + FGN V+ +V+
Sbjct: 3 SKLYVGNLPYSVNDDSLRHNFSE--------------FGN------------VASAKVMT 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+R++ RS+GFGFV M++ EA+ A+ + +DGR + VN + P+
Sbjct: 37 DRDSGRSKGFGFVEMASEAEAQAAINGLNGQSVDGRQIVVNVSRPK 82
>gi|363543257|ref|NP_001241843.1| uncharacterized protein LOC100857047 [Zea mays]
gi|238007748|gb|ACR34909.1| unknown [Zea mays]
gi|413916459|gb|AFW56391.1| putative glycine-rich protein [Zea mays]
Length = 261
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 58/79 (73%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L + D+ L F+++G+V+ A+++ DRE+GRSRGFGF+T +S E + AI A
Sbjct: 32 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASAAITA 91
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG+ LDGR IRVN A +R
Sbjct: 92 MDGKTLDGRNIRVNHANER 110
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLFVG L Y D L F K G ++ E K +I
Sbjct: 31 SKLFVGGLSYGTDDHSLRDEFAKYG--QVIEAK------------------------IIL 64
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RE+ RSRGFGF+T ++ EEA A+ +DGR + VN A R
Sbjct: 65 DRESGRSRGFGFITYTSSEEASAAITAMDGKTLDGRNIRVNHANER 110
>gi|2331131|gb|AAB66884.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 162
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE FS +G++++++++ DRETGRS GFGF+T SSE + DAI
Sbjct: 8 YRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSLGFGFITFSSEQSMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 GMNGKELDGRNITVNEAQ 85
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 26/107 (24%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P + FVG L + D L F G EI + K
Sbjct: 4 PDVKYRCFVGGLAWATDDRSLEAAFSTYG--EILDSK----------------------- 38
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+I +RET RS GFGF+T S+ + A+E + ++DGR +TVN+A
Sbjct: 39 -IINDRETGRSLGFGFITFSSEQSMRDAIEGMNGKELDGRNITVNEA 84
>gi|90704785|dbj|BAE92287.1| putative glycine-rich RNA binding protein [Cryptomeria japonica]
Length = 181
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 55/78 (70%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W D+ L+ F+ G+V++++VV DRETGRSRGFGFVT E + DAI
Sbjct: 8 FRCFVGGLSWSTDDRSLKDAFTAFGEVMDSKVVSDRETGRSRGFGFVTFMDEQSMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G++LDGR I VN A+
Sbjct: 68 GMNGRDLDGRNITVNRAQ 85
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F G E+ + K V+ +
Sbjct: 9 RCFVGGLSWSTDDRSLKDAFTAFG--EVMDSK------------------------VVSD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + A+E + D+DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFMDEQSMRDAIEGMNGRDLDGRNITVNRA 84
>gi|326476993|gb|EGE01003.1| nucleolin protein Nsr1 [Trichophyton equinum CBS 127.97]
Length = 479
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 38/213 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LFVGNL ++VD E L FE+ G + S +++
Sbjct: 238 ANLFVGNLSWNVDEEWLRSEFEEFGEL--------------------------SGTRIVT 271
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN--------KAAPRGTQPER 271
+RE+ RSRGFG+V VE+A KA ++DGR + ++ A PR R
Sbjct: 272 DRESGRSRGFGYVEFVNVEDAVKAHGAKKDAELDGRKMNLDYANARANGNANPRERADNR 331
Query: 272 AP----RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
A + +++GN+ + D ++++FS++G + R+ D ++GR +GFG+V
Sbjct: 332 AKSFGDQTSPESDTLFIGNISFSADENMVQELFSKYGTIQGIRLPTDPDSGRPKGFGYVQ 391
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
SS E A+ A +G +L GR+IR++ + +Q
Sbjct: 392 FSSVDEARAALEAENGADLGGRSIRLDFSTPKQ 424
>gi|187956894|gb|AAI58031.1| 1810053B01Rik protein [Mus musculus]
Length = 607
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 41/215 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NL +VD ++L LF + G ++ +V R
Sbjct: 193 IYVKNLHANVDEQRLQDLFSQFGNMQSVKVM----------------------------R 224
Query: 222 ETD-RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE--- 277
+++ +SRGFGFV EEA+KAV+ + ++ G+LL V +A R + R FE
Sbjct: 225 DSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMK 284
Query: 278 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +YV NL +++ RL++VFS +G + +A+V+ E+ S+GFGFV SS
Sbjct: 285 QERQNRYQGVNLYVKNLDDSINDERLKEVFSTYGVITSAKVM--TESSHSKGFGFVCFSS 342
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 343 PEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+ L+VG+L DV L +F G + + VC
Sbjct: 11 SSLYVGDLHPDVTESMLYEMFSPIGNI---------------LSIRVCR----------- 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + I G+ + + + R P + + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEVIKGQPIRIMWS-------HRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++++VVY+ E G SRGFGFV + AI
Sbjct: 98 MGNIFIKNLENSIDNKALYDTFSTFGSILSSKVVYN-EHG-SRGFGFVHFETHEAAQKAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + RQ+R
Sbjct: 156 NTMNGMLLNDRKVFVGHFKSRQKR 179
>gi|229595173|ref|XP_001019281.3| nucleolar phosphoprotein, putative [Tetrahymena thermophila]
gi|1262277|gb|AAA96781.1| nucleolar phosphoprotein [Tetrahymena thermophila]
gi|225566349|gb|EAR99036.3| nucleolar phosphoprotein, putative [Tetrahymena thermophila SB210]
Length = 476
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 86/158 (54%), Gaps = 9/158 (5%)
Query: 208 AVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT 267
+V V+LL+ E RS+G FV+ T E KAVEM + + GR L + K P+
Sbjct: 289 SVARVNLLK----NEQGRSKGIAFVSFETEEGCNKAVEMSN-SEFMGRYLIIEKTKPKTE 343
Query: 268 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
+P P V E I+VGNL + D L++ F+ GKV +AR+ G+SRGFG V
Sbjct: 344 RPAHLP-VDEDSKTIFVGNLSFRTDKETLKKFFASCGKVADARIA--EADGKSRGFGHVE 400
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
+ + +A+ + G+ +DGR I+V+VA R +R F
Sbjct: 401 FEERSGVENALKKV-GEQIDGRPIKVDVAASRGKREGF 437
>gi|194696360|gb|ACF82264.1| unknown [Zea mays]
gi|414869196|tpg|DAA47753.1| TPA: ribonucleoprotein [Zea mays]
Length = 275
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 96/196 (48%), Gaps = 30/196 (15%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+L N+P+D ++++ LFE G+V E+ +
Sbjct: 72 RLVAQNIPWDCTADEMRALFESHGSVVGVELSMY-------------------------- 105
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP-- 278
+++RG FVTM + EEA A+ + ++ R + V+ A PR QP++ V +
Sbjct: 106 -SANKNRGLAFVTMGSEEEALAALTHLNSTILNDRKIKVDFARPRKKQPKQPAVVSDDTE 164
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG-RSRGFGFVTMSSETELNDA 337
+ ++VGNL W V N L ++F+ VV+A V++ T RS G+ FV+ SS+ A
Sbjct: 165 KYVVFVGNLTWRVRNRHLRELFASAPGVVSAEVIFHTTTPRRSAGYAFVSFSSKESAGAA 224
Query: 338 IAALDGQNLDGRAIRV 353
I+A +G+ L GR I V
Sbjct: 225 ISAFNGKILMGRPINV 240
>gi|187373099|gb|ACD03270.1| glycine-rich RNA-binding protein [Nicotiana tabacum]
Length = 157
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W + L FS++G++V+++++ DRETGRSRGFGFVT E + DAI
Sbjct: 6 YRCFVGGLAWATTDQTLGDAFSQYGEIVDSKIINDRETGRSRGFGFVTFKDEQAMRDAIE 65
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ+LDGR I VN A+
Sbjct: 66 GMNGQDLDGRNITVNEAQ 83
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + + L F + G EI + K +I +
Sbjct: 7 RCFVGGLAWATTDQTLGDAFSQYG--EIVDSK------------------------IIND 40
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + A+E + D+DGR +TVN+A
Sbjct: 41 RETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEA 82
>gi|124268989|ref|YP_001022993.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
gi|124261764|gb|ABM96758.1| RNA-binding region RNP-1 [Methylibium petroleiphilum PM1]
Length = 162
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 58/84 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNL + V + L+Q F E G V +A+V+ DR+TGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLAYSVRDDDLQQAFGEFGAVTSAKVMMDRDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ+L GRAI VN A R+ R
Sbjct: 62 EGMNGQSLSGRAIVVNEARPREER 85
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 26/109 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL Y V + L F + G V A +V+ +
Sbjct: 4 KLYVGNLAYSVRDDDLQQAFGEFGAVTSA--------------------------KVMMD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
R+T RS+GFGFV M + EA+ A+E + + GR + VN+A PR +P
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAIEGMNGQSLSGRAIVVNEARPREERP 86
>gi|159464421|ref|XP_001690440.1| hypothetical protein CHLREDRAFT_99772 [Chlamydomonas reinhardtii]
gi|158279940|gb|EDP05699.1| predicted protein [Chlamydomonas reinhardtii]
Length = 174
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 91/198 (45%), Gaps = 30/198 (15%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+ AK+FVG L ++ EKL E G+V A +VS
Sbjct: 5 QSAKVFVGGLSWETTGEKLRAYMENFGSVREA---------------------FVS---- 39
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
YNR R RGFGFV + E A+K V H ID R + +A P+ PE +
Sbjct: 40 -YNRNNGRPRGFGFVVFESPEVADKVVATKHM--IDRREVEAKRAVPKEDAPEEKQQGSA 96
Query: 278 P--GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
P +I+VG L VD A+L Q FS+ G V +A V+YD E R RGFGFVT + E +
Sbjct: 97 PQRTKKIFVGGLAPTVDEAQLRQHFSDFGTVEDAVVMYDHENKRPRGFGFVTFAEEEAVE 156
Query: 336 DAIAALDGQNLDGRAIRV 353
+ Q + + I V
Sbjct: 157 RVFSHGAVQTIADKPIEV 174
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 38/94 (40%), Gaps = 26/94 (27%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCA 208
E+++ P K+FVG L VD +L F GTVE A
Sbjct: 90 EKQQGSAPQRTKKIFVGGLAPTVDEAQLRQHFSDFGTVEDA------------------- 130
Query: 209 VFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEK 242
V+Y+ E R RGFGFVT + E E+
Sbjct: 131 -------VVMYDHENKRPRGFGFVTFAEEEAVER 157
>gi|166157896|ref|NP_001107551.1| polyadenylate-binding protein 1-like [Mus musculus]
gi|187960776|gb|ACD43645.1| embryonic poly(A)-binding protein [Mus musculus]
Length = 607
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 41/215 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NL +VD ++L LF + G ++ +V R
Sbjct: 193 IYVKNLHANVDEQRLQDLFSQFGNMQSVKVM----------------------------R 224
Query: 222 ETD-RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE--- 277
+++ +SRGFGFV EEA+KAV+ + ++ G+LL V +A R + R FE
Sbjct: 225 DSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMK 284
Query: 278 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +YV NL +++ RL++VFS +G + +A+V+ E+ S+GFGFV SS
Sbjct: 285 QERQNRYQGVNLYVKNLDDSINDERLKEVFSTYGVITSAKVM--TESSHSKGFGFVCFSS 342
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 343 PEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+ L+VG+L DV L +F G + + VC
Sbjct: 11 SSLYVGDLHPDVTESMLYEMFSPIGNI---------------LSIRVCR----------- 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + I G+ + + + R P + + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEVIKGQPIRIMWS-------HRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++++VVY+ E G SRGFGFV + AI
Sbjct: 98 MGNIFIKNLENSIDNKALYDTFSTFGSILSSKVVYN-EHG-SRGFGFVHFETHEAAQKAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + RQ+R
Sbjct: 156 NTMNGMLLNDRKVFVGHFKSRQKR 179
>gi|402078039|gb|EJT73388.1| nuclear localization sequence binding protein [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 499
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 100/202 (49%), Gaps = 33/202 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LFVG+L ++VD + L F+ G V A +VI
Sbjct: 253 ATLFVGSLSWNVDDDMLKEEFKFCGEVVSA--------------------------RVIT 286
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+RET RS+GFG+V ++ +AEKA IDGR + V+ + + + A R + G
Sbjct: 287 DRETGRSKGFGYVDFASPADAEKAHAEKQGAFIDGRQIKVDFSTGKSNNNDSADRAKKFG 346
Query: 280 F-------RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
++VGNLP++ D + + F ++ + R+ D+E+GR +GFG+V+ +S
Sbjct: 347 DVTSPESDTLFVGNLPFDADEDVVSEFFGSVAEIKSLRLPTDQESGRRKGFGYVSFNSVE 406
Query: 333 ELNDAIAALDGQNLDGRAIRVN 354
+ A L GQ+++GR R++
Sbjct: 407 DAKSAFTQLSGQSINGRPCRLD 428
>gi|241947949|ref|XP_002416697.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
gi|223640035|emb|CAX44279.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
Length = 423
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 101/211 (47%), Gaps = 36/211 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E A LFVG L +++D L FE G V A +V
Sbjct: 194 EPATLFVGRLSWNIDDSWLKREFEHIGGVISA--------------------------RV 227
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-----APRGTQPERA 272
I R T +SRG+G+V T AEKA+E +IDGR + ++ + A R T +RA
Sbjct: 228 IMERATGKSRGYGYVDFETKSAAEKALEEMQGKEIDGRPINLDMSTGKPHASRSTN-DRA 286
Query: 273 PRVFEP----GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
+ + ++VGNL + + L VF E+G V++ RV +T + +GFG+V
Sbjct: 287 KQYGDSQSALSDTLFVGNLSFNANRDNLFTVFGEYGNVISCRVPTHPDTQQPKGFGYVQF 346
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
SS E A+ AL+G+ ++GR R++ + R
Sbjct: 347 SSVDEAKAALEALNGEYIEGRPCRLDFSTPR 377
>gi|410446610|ref|ZP_11300713.1| hypothetical protein B273_0331 [SAR86 cluster bacterium SAR86E]
gi|409980282|gb|EKO37033.1| hypothetical protein B273_0331 [SAR86 cluster bacterium SAR86E]
Length = 79
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
IYVGNLPW +D+A LEQ+F+EHG + +A+V+ DR+T RSRGFGFV MS E +AI
Sbjct: 1 MNIYVGNLPWSIDDASLEQIFAEHGTITSAKVITDRQTNRSRGFGFVEMSDGGE--NAIQ 58
Query: 340 ALDGQNLDGRAIRVN 354
AL+ ++GR + VN
Sbjct: 59 ALNDAEVEGRKLVVN 73
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 28/105 (26%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
++VGNLP+ +D L +F + GT+ A +VI +
Sbjct: 2 NIYVGNLPWSIDDASLEQIFAEHGTITSA--------------------------KVITD 35
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
R+T+RSRGFGFV MS + E A++ + +++GR L VN++ PR
Sbjct: 36 RQTNRSRGFGFVEMS--DGGENAIQALNDAEVEGRKLVVNESRPR 78
>gi|82623423|gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
Length = 178
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 55/78 (70%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W + L + FS++G+VV ++++ DRETGRSRGFGFVT E + DAI
Sbjct: 6 YRCFVGGLAWATTDNTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIE 65
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ+LDGR I VN A+
Sbjct: 66 GMNGQDLDGRNITVNEAQ 83
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + L+ F + G E+ E K +I +
Sbjct: 7 RCFVGGLAWATTDNTLSEAFSQYG--EVVESK------------------------IIND 40
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + A+E + D+DGR +TVN+A
Sbjct: 41 RETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEA 82
>gi|328858559|gb|EGG07671.1| hypothetical protein MELLADRAFT_71659 [Melampsora larici-populina
98AG31]
Length = 163
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 57/79 (72%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
G +++VGNL W D L Q F+++G+VV+A V+ DRETGRSRGFGF+T S++ + A
Sbjct: 3 AGNKLFVGNLAWSTDTNSLTQAFNQYGEVVDAIVMQDRETGRSRGFGFITFSNQDQAQAA 62
Query: 338 IAALDGQNLDGRAIRVNVA 356
I AL+ ++DGR IRVN A
Sbjct: 63 IDALNEADVDGRNIRVNFA 81
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVGNL + D+ L F + G V V A+ V+ +
Sbjct: 6 KLFVGNLAWSTDTNSLTQAFNQYGEV-------------------VDAI-------VMQD 39
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGF+T S ++A+ A++ + D+DGR + VN A
Sbjct: 40 RETGRSRGFGFITFSNQDQAQAAIDALNEADVDGRNIRVNFA 81
>gi|395829049|ref|XP_003787673.1| PREDICTED: polyadenylate-binding protein 1-like [Otolemur
garnettii]
Length = 611
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 41/219 (18%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E ++V NL DVD + L LF + G +L V
Sbjct: 189 EFTNIYVKNLQADVDEQGLQELFSQFG----------------------------KMLSV 220
Query: 218 IYNRETD-RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
R++ SRGFGFV T EEA+KAV + ++ GRLL V +A R + R F
Sbjct: 221 KVMRDSSGHSRGFGFVNFETHEEAQKAVVHMNGKEVSGRLLYVGRAQKRVERQNELKRRF 280
Query: 277 E----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
E G +YV NL +D+ +L + FS +G + +A+V+ E G S+GFGFV
Sbjct: 281 EQMKQDRMNRYQGVNLYVKNLDDSIDDEKLRKEFSPYGMITSAKVM--TEGGHSKGFGFV 338
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
SS E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 339 CFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV A+L+EK V + ++V
Sbjct: 11 ASLYVGDLHADVTE---ALLYEK-----------------------FSPVGPILSIRVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + I G+ + + + +R P + + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEMIKGQPIRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++ +V D E G SRGFGFV + AI
Sbjct: 98 VGNIFIKNLEASIDNKALYDTFSTFGNILSCKVACD-EHG-SRGFGFVHFETHEAAQHAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ + V + R+ R
Sbjct: 156 NTMNGMLLNDHKVFVGHFKSRRER 179
>gi|365091634|ref|ZP_09328989.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
gi|363415945|gb|EHL23069.1| RNP-1 like RNA-binding protein [Acidovorax sp. NO-1]
Length = 192
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 58/84 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + LEQ F + G V +A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
+ ++GQ L GR+I VN A + R
Sbjct: 62 SGMNGQPLGGRSIVVNEARPMEPR 85
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 26/112 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 4 KLYVGNLPYSVRDGDLEQAFGQFGAVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 272
R+T RS+GFGFV M + EA+ A+ + + GR + VN+A P +P R+
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAISGMNGQPLGGRSIVVNEARPMEPRPPRS 89
>gi|46139099|ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 56/79 (70%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W + L Q FSE G+V ++ ++ DR+TGR+RGFGFVT S+E + A+ A
Sbjct: 3 KLYVGNLSWNTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVDA 62
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L+ Q LDGR IRVNVA R
Sbjct: 63 LNEQELDGRRIRVNVANAR 81
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KL+VGNL ++ E L F + G V + ++
Sbjct: 2 SKLYVGNLSWNTTDETLRQTFSEFGEVTDS--------------------------IIMR 35
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+R+T R+RGFGFVT ST E+A AV+ + ++DGR + VN A R
Sbjct: 36 DRDTGRARGFGFVTFSTEEQATAAVDALNEQELDGRRIRVNVANAR 81
>gi|350635107|gb|EHA23469.1| hypothetical protein ASPNIDRAFT_173997 [Aspergillus niger ATCC
1015]
Length = 235
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 51/220 (23%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LFVGNL ++VD L FE G + S ++++
Sbjct: 1 ANLFVGNLSWNVDEAWLQSEFESFGEL--------------------------SGVRIMT 34
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
R+T RSRGFG+V + +A KA E +IDGR++ ++ A R ++ + G
Sbjct: 35 ERDTGRSRGFGYVEYTNAVDAAKAFEAKKGAEIDGRVINLDYATGRPANKDQ-----QGG 89
Query: 280 FR--------------------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGR 319
F+ ++VGNLP++ + + ++F E G ++ R+ D ++GR
Sbjct: 90 FKDRANARARSFGDQASPESDTLFVGNLPFDANEDSVGELFGEKGSILGIRLPTDPDSGR 149
Query: 320 SRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
+GFG+V SS E A L G +L GR +R++ + R
Sbjct: 150 PKGFGYVQYSSVDEARAAFNELQGADLLGRPVRLDFSTPR 189
>gi|351725255|ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 60/79 (75%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G L + VD+ L+ FS G VV+A+V+ DR++GRSRGFGFV S++ + A++A
Sbjct: 37 KLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSA 96
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG++LDGR+IRV+ A DR
Sbjct: 97 MDGKDLDGRSIRVSYANDR 115
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 26/114 (22%)
Query: 152 EFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFY 211
++ +KLF+G L Y VD + L F G V A
Sbjct: 28 NYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDA---------------------- 65
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+VI +R++ RSRGFGFV S E A A+ D+DGR + V+ A R
Sbjct: 66 ----KVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLDGRSIRVSYANDR 115
>gi|194224457|ref|XP_001500563.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Equus
caballus]
Length = 612
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 100/214 (46%), Gaps = 39/214 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NLP VD L LF + G ++ VK +
Sbjct: 193 IYVKNLPGHVDERGLQDLFSQFG--KMLSVK-------------------------VMRD 225
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
++ SRGFGFV EEA+KAV + + GRLL V +A RG + R FE
Sbjct: 226 DSGHSRGFGFVNFEKHEEAQKAVMDMNGMQVSGRLLYVGRAQKRGERQNELKRRFEHTKQ 285
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL +D+ +L + FS +G + +A+V+ E G S+GFGFV SS
Sbjct: 286 DRLNRCQGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSP 343
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 344 EEATKAVTEMNGRIIGTKPLYVALAQRKEERKAI 377
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 74/143 (51%), Gaps = 13/143 (9%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR---- 281
SRGFGFV T E A++A+ + ++ R + V G R R E G R
Sbjct: 137 SRGFGFVHFETHEAAQQAISTMNGMLLNDRKVFV------GHFKSRREREAELGARATAF 190
Query: 282 --IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
IYV NLP VD L+ +FS+ GK+++ +V+ D ++G SRGFGFV E A+
Sbjct: 191 TNIYVKNLPGHVDERGLQDLFSQFGKMLSVKVMRD-DSGHSRGFGFVNFEKHEEAQKAVM 249
Query: 340 ALDGQNLDGRAIRVNVAEDRQRR 362
++G + GR + V A+ R R
Sbjct: 250 DMNGMQVSGRLLYVGRAQKRGER 272
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P +YVG+L +V A L + FS G +++ RV D T RS G+ ++ + A
Sbjct: 9 PLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERA 68
Query: 338 IAALDGQNLDGRAIRV 353
+ ++ + + G+ IR+
Sbjct: 69 LDTMNFEVIKGQPIRI 84
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 41/134 (30%)
Query: 136 GERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHF 195
GERQ E +++ + + L+V NL +D EKL F G + A+V
Sbjct: 270 GERQNELKRRFEHTKQDRLNRCQGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAKVM--- 326
Query: 196 LFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGR 255
+G H S+GFGFV S+ EEA KAV +++GR
Sbjct: 327 ---TEGGH----------------------SKGFGFVCFSSPEEATKAVT-----EMNGR 356
Query: 256 LLTVNKAAPRGTQP 269
++ GT+P
Sbjct: 357 II--------GTKP 362
>gi|440804413|gb|ELR25290.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 146
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W D+ L F +HG+V++A+V+ DR+TG+SRGFGFVT SS E A A
Sbjct: 4 KLFVGGLSWSTDDNSLRSAFEQHGEVIDAKVILDRDTGKSRGFGFVTFSSADEAEAAKGA 63
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L+ +LDGR IRV+ A DR
Sbjct: 64 LNQTDLDGREIRVDSASDR 82
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 52/106 (49%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
AKLFVG L + D L FE+ G V A +VI
Sbjct: 3 AKLFVGGLSWSTDDNSLRSAFEQHGEVIDA--------------------------KVIL 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+R+T +SRGFGFVT S+ +EAE A ++ D+DGR + V+ A+ R
Sbjct: 37 DRDTGKSRGFGFVTFSSADEAEAAKGALNQTDLDGREIRVDSASDR 82
>gi|309790385|ref|ZP_07684950.1| RNP-1 like RNA-binding protein [Oscillochloris trichoides DG-6]
gi|308227577|gb|EFO81240.1| RNP-1 like RNA-binding protein [Oscillochloris trichoides DG6]
Length = 99
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VGNL W +D+ +LE F HG V +ARV++DR+TGRSRGFGFV M +++ I A
Sbjct: 4 KLFVGNLAWSIDDQKLESFFRAHGNVQSARVIHDRDTGRSRGFGFVEMDV-NDVSAVIRA 62
Query: 341 LDGQNLDGRAIRVNVAEDR 359
DG +DGR IRVN AED+
Sbjct: 63 TDGAEVDGRPIRVNEAEDK 81
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 31/115 (26%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVGNL + +D +KL F G V+ A +VI++
Sbjct: 4 KLFVGNLAWSIDDQKLESFFRAHGNVQSA--------------------------RVIHD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN----KAAPRGTQPER 271
R+T RSRGFGFV M V + + ++DGR + VN K PRG + +R
Sbjct: 38 RDTGRSRGFGFVEMD-VNDVSAVIRATDGAEVDGRPIRVNEAEDKGGPRGPRRDR 91
>gi|443895166|dbj|GAC72512.1| hypothetical protein PANT_7d00134 [Pseudozyma antarctica T-34]
Length = 301
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 55/79 (69%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W + L FS G++ + V+ DRETGRSRGFGFVT +++ E + AIAA
Sbjct: 4 KVYVGNLSWNTTDDSLAHAFSAFGQLTDYIVMKDRETGRSRGFGFVTFATQGEADAAIAA 63
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L+ Q LDGR IRVN+A R
Sbjct: 64 LNEQELDGRRIRVNMANSR 82
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
AK++VGNL ++ + LA F G + Y+ V+
Sbjct: 3 AKVYVGNLSWNTTDDSLAHAFSAFGQLTD----------------------YI----VMK 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RSRGFGFVT +T EA+ A+ + ++DGR + VN A R
Sbjct: 37 DRETGRSRGFGFVTFATQGEADAAIAALNEQELDGRRIRVNMANSR 82
>gi|367043706|ref|XP_003652233.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
gi|346999495|gb|AEO65897.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
Length = 533
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 104/211 (49%), Gaps = 37/211 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LFVGNL + VD L F+ N+G V+ +V+
Sbjct: 288 ATLFVGNLGWGVDDNALYEEFQ----------------NNEG----------VTGARVVT 321
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA-------PRGTQPERA 272
++++ RSRGFG+V T E AEKA + + GR + ++ AA P ERA
Sbjct: 322 DKDSGRSRGFGYVDFETPEAAEKAYNDKNGAFLQGREMRLDFAAKPSADSTPNARAAERA 381
Query: 273 PR---VFEP-GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
+ V P ++VGNL + + + F++ KV + R+ D+E+GR +GF +VT
Sbjct: 382 RKHGDVISPESDTLFVGNLSFSANEESVSAFFNKVAKVQSLRIPTDQESGRPKGFAYVTF 441
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
SS + A AL+G +LDGR +R++ A+ R
Sbjct: 442 SSVDDAKAAFEALNGSDLDGRPVRLDFAKPR 472
>gi|164657987|ref|XP_001730119.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
gi|159104014|gb|EDP42905.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
Length = 664
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 38/211 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NL V E+ LFEK G + A I
Sbjct: 262 VYVKNLDPAVTQEEFEKLFEKYGKITSA---------------------------AIATD 294
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP--- 278
+ +SRGFGFV S E+A KAVE + + G+ L + +A + + E R +E
Sbjct: 295 QEGKSRGFGFVNFSEHEQAAKAVEELNDTEFHGQKLFLGRAQKKSEREEELRRAYEAAKN 354
Query: 279 -------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +Y+ NLP + D+ RL++ F+ G +A+V+ TG SRGFGFV S+
Sbjct: 355 EKLSKYQGVNLYIKNLPEDFDDERLQEEFAPFGTTTSAKVM-RTPTGASRGFGFVCYSAP 413
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
E N A+A ++G+ ++ R + V +A+ + R
Sbjct: 414 EEANKAVAEMNGKMIENRPLYVALAQRKDVR 444
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
VS ++V + T RS G+ +V E++E+A+E + I GR + + +R
Sbjct: 106 VSSIRVCRDTVTRRSLGYAYVNFLNAEDSERALEQLNYTPIRGRPCRIMWS-------QR 158
Query: 272 APRVFEPG-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
P G I++ NL +DN L F+ GK+++ +V + E G S G+GFV S
Sbjct: 159 DPGQRRAGQGNIFIKNLDEAIDNKALHDTFAAFGKILSCKVASN-EHG-SLGYGFVHYES 216
Query: 331 ETELNDAIAALDGQNLDGRAIRVN---VAEDRQRR 362
AI ++G L+ + + V +DRQ +
Sbjct: 217 NDAAEAAIKHVNGMLLNDKKVYVGHHISKKDRQAK 251
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVG L V+ A L ++F+ G V + RV D T RS G+ +V + + A+ L
Sbjct: 82 LYVGELEPNVNEAILFEIFNMVGAVSSIRVCRDTVTRRSLGYAYVNFLNAEDSERALEQL 141
Query: 342 DGQNLDGRAIRV 353
+ + GR R+
Sbjct: 142 NYTPIRGRPCRI 153
>gi|148674413|gb|EDL06360.1| mCG5434 [Mus musculus]
Length = 534
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 107/215 (49%), Gaps = 41/215 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NL +VD ++L LF + G ++ +V R
Sbjct: 193 IYVKNLHANVDEQRLQDLFSQFGNMQSVKVM----------------------------R 224
Query: 222 ETD-RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE--- 277
+++ +SRGFGFV EEA+KAV+ + ++ G+LL V +A R + R FE
Sbjct: 225 DSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMK 284
Query: 278 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +YV NL +++ RL++VFS +G + +A+V+ E+ S+GFGFV SS
Sbjct: 285 QERQNRYQGVNLYVKNLDDSINDERLKEVFSTYGVITSAKVM--TESSHSKGFGFVCFSS 342
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 343 PEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+ L+VG+L DV L +F G + + VC
Sbjct: 11 SSLYVGDLHPDVTESMLYEMFSPIGNI---------------LSIRVCR----------- 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + I G+ + + R P + + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEVIKGQPIRI-------MWSHRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++++VVY+ E G SRGFGFV + AI
Sbjct: 98 MGNIFIKNLENSIDNKALYDTFSTFGSILSSKVVYN-EHG-SRGFGFVHFETHEAAQKAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + RQ+R
Sbjct: 156 NTMNGMLLNDRKVFVGHFKSRQKR 179
>gi|260221864|emb|CBA30852.1| Putative RNA-binding protein rbpB [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 124
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 59/82 (71%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+IYVGNLP+ V + L+ FSE G+V +A+V+ DR+TGRS+GF FV MS+ AI
Sbjct: 30 KIYVGNLPYSVTDDSLQSNFSEFGEVTSAKVMMDRDTGRSKGFAFVEMSTPAFAQAAIDG 89
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
L+GQ++DGR+I VN+A R+ R
Sbjct: 90 LNGQSVDGRSIVVNLARPREDR 111
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+K++VGNLPY V + L F + G V A +V+
Sbjct: 29 SKIYVGNLPYSVTDDSLQSNFSEFGEVTSA--------------------------KVMM 62
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+R+T RS+GF FV MST A+ A++ + +DGR + VN A PR
Sbjct: 63 DRDTGRSKGFAFVEMSTPAFAQAAIDGLNGQSVDGRSIVVNLARPR 108
>gi|418528344|ref|ZP_13094294.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
gi|371454720|gb|EHN67722.1| RNA-binding protein RNP-3 [Comamonas testosteroni ATCC 11996]
Length = 163
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 59/84 (70%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + LEQ FS+ G V +ARV+ +R+TGRS+GFGFV M+SE E AI
Sbjct: 2 GNKLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR++ VN A + R
Sbjct: 62 QGMNGQPLGGRSLVVNEARPMEPR 85
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 26/111 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 4 KLYVGNLPYGVRDNDLEQAFSQFGAVASA--------------------------RVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
R+T RS+GFGFV M++ EA+ A++ + + GR L VN+A P +P R
Sbjct: 38 RDTGRSKGFGFVEMASEAEAQAAIQGMNGQPLGGRSLVVNEARPMEPRPPR 88
>gi|299531903|ref|ZP_07045303.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
gi|298720078|gb|EFI61035.1| RNA-binding protein RNP-3 [Comamonas testosteroni S44]
Length = 162
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 59/84 (70%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + LEQ FS+ G V +ARV+ +R+TGRS+GFGFV M+SE E AI
Sbjct: 2 GNKLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR++ VN A + R
Sbjct: 62 QGMNGQPLGGRSLVVNEARPMEPR 85
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 26/112 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 4 KLYVGNLPYGVRDNDLEQAFSQFGAVASA--------------------------RVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 272
R+T RS+GFGFV M++ EA+ A++ + + GR L VN+A P +P R+
Sbjct: 38 RDTGRSKGFGFVEMASEAEAQAAIQGMNGQPLGGRSLVVNEARPMEPRPPRS 89
>gi|264680852|ref|YP_003280762.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
gi|262211368|gb|ACY35466.1| RNA-binding protein RNP-3 [Comamonas testosteroni CNB-2]
Length = 164
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 59/84 (70%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + LEQ FS+ G V +ARV+ +R+TGRS+GFGFV M+SE E AI
Sbjct: 2 GNKLYVGNLPYGVRDNDLEQAFSQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR++ VN A + R
Sbjct: 62 QGMNGQPLGGRSLVVNEARPMEPR 85
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 26/112 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 4 KLYVGNLPYGVRDNDLEQAFSQFGAVASA--------------------------RVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 272
R+T RS+GFGFV M++ EA+ A++ + + GR L VN+A P +P R+
Sbjct: 38 RDTGRSKGFGFVEMASEAEAQAAIQGMNGQPLGGRSLVVNEARPMEPRPPRS 89
>gi|356568734|ref|XP_003552565.1| PREDICTED: uncharacterized protein LOC100807155 [Glycine max]
Length = 244
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 58/81 (71%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG + + D+ L + F+ +G+V++ +V+ DRETGRSRGFGFVT ++ + + AI
Sbjct: 41 KLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQG 100
Query: 341 LDGQNLDGRAIRVNVAEDRQR 361
+DGQ+L GR IRVN A +R R
Sbjct: 101 MDGQDLHGRRIRVNYATERSR 121
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 26/112 (23%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
+ AKLFVG + Y D L F + G E+ +VK
Sbjct: 34 IRSMSSAKLFVGGISYSTDDMSLRESFARYG--EVIDVK--------------------- 70
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
VI +RET RSRGFGFVT +T E+A A++ D+ GR + VN A R
Sbjct: 71 ---VIMDRETGRSRGFGFVTFATSEDASSAIQGMDGQDLHGRRIRVNYATER 119
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 58/81 (71%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG + + D+ L + F+ +G+V++ +V+ DRETGRSRGFGFVT ++ + + AI
Sbjct: 41 KLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQG 100
Query: 341 LDGQNLDGRAIRVNVAEDRQR 361
+DGQ+L GR IRVN A +R R
Sbjct: 101 MDGQDLHGRRIRVNYATERSR 121
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 26/112 (23%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
+ AKLFVG + Y D L F + G E+ +VK
Sbjct: 34 IRSMSSAKLFVGGISYSTDDMSLRESFARYG--EVIDVK--------------------- 70
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
VI +RET RSRGFGFVT +T E+A A++ D+ GR + VN A R
Sbjct: 71 ---VIMDRETGRSRGFGFVTFATSEDASSAIQGMDGQDLHGRRIRVNYATER 119
>gi|407940456|ref|YP_006856097.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
gi|407898250|gb|AFU47459.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
Length = 116
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 58/80 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+IYVGNLP+ V +A LE F+E G V +A+V+ DRETGRS+GFGFV M++ AI A
Sbjct: 4 KIYVGNLPYSVTDATLESNFAEFGGVSSAKVMMDRETGRSKGFGFVEMANAEVAQAAIRA 63
Query: 341 LDGQNLDGRAIRVNVAEDRQ 360
L G ++DGR+I VN+A R+
Sbjct: 64 LHGMSVDGRSIVVNLARPRE 83
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 26/108 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+K++VGNLPY V L F + G V A +V+
Sbjct: 3 SKIYVGNLPYSVTDATLESNFAEFGGVSSA--------------------------KVMM 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT 267
+RET RS+GFGFV M+ E A+ A+ H +DGR + VN A PR T
Sbjct: 37 DRETGRSKGFGFVEMANAEVAQAAIRALHGMSVDGRSIVVNLARPRET 84
>gi|6911144|gb|AAF31403.1|AF200322_1 putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W + L + FS++G+++ ++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 YRCFVGGLAWATTDQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQSMRDAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ LDGR I VN A+
Sbjct: 68 GMNGQTLDGRNITVNEAQ 85
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + + L+ F + G EI E K +I +
Sbjct: 9 RCFVGGLAWATTDQSLSEAFSQYG--EILESK------------------------IIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + A+E + +DGR +TVN+A
Sbjct: 43 RETGRSRGFGFVTFKDEQSMRDAIEGMNGQTLDGRNITVNEA 84
>gi|322695076|gb|EFY86891.1| cutinase negative acting protein [Metarhizium acridum CQMa 102]
Length = 516
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 106/233 (45%), Gaps = 49/233 (21%)
Query: 150 EEEFVEPPEDAK--------LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQG 201
EEE P+ AK LF GNL +++D L+ F +G
Sbjct: 249 EEEIDATPKKAKTDEQAASTLFAGNLSWNIDDNTLSEAF-------------------KG 289
Query: 202 FHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNK 261
F V A +V+ +R+ RSRGFG+V T E A KA E ++D R L ++
Sbjct: 290 FEGLVGA-------RVVTDRDGGRSRGFGYVDFETAEAATKAYEAMQGSELDSRPLNLDY 342
Query: 262 AA-------PRGTQPERAPR----VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNAR 310
A PR +RA + V +++GNLP++ D + Q F+E +V + R
Sbjct: 343 ANSRPADSNPRDRATDRAKKHGDSVSPESETLFIGNLPFDTDQETVRQFFAEVAEVASVR 402
Query: 311 VVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL----DGRAIRVNVAEDR 359
+ D ++G +GFG+VT +S + + L+G L R++R++ A R
Sbjct: 403 LPTDPDSGNLKGFGYVTFTSVEDAKNVFQQLNGAPLGNGRTSRSVRLDFASSR 455
>gi|383767221|ref|YP_005446202.1| RNA-binding protein [Phycisphaera mikurensis NBRC 102666]
gi|381387489|dbj|BAM04305.1| RNA-binding protein [Phycisphaera mikurensis NBRC 102666]
Length = 112
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
++YVGNL W LE +FS +G V +A V+ DRETGRSRGFGFVTM E + AI
Sbjct: 1 MKMYVGNLAWRTTTEDLEALFSNYGSVSDAIVLTDRETGRSRGFGFVTMGDE-DAKKAID 59
Query: 340 ALDGQNLDGRAIRVNVAEDRQRRS 363
ALDG + +GR +RVN A++R RS
Sbjct: 60 ALDGSDFEGRPLRVNEAQERAPRS 83
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 55/114 (48%), Gaps = 33/114 (28%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K++VGNL + +E L LF G+V A V+ +
Sbjct: 2 KMYVGNLAWRTTTEDLEALFSNYGSVSDA--------------------------IVLTD 35
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
RET RSRGFGFVTM E+A+KA++ D +GR L VN+A ERAPR
Sbjct: 36 RETGRSRGFGFVTMGD-EDAKKAIDALDGSDFEGRPLRVNEA------QERAPR 82
>gi|224081795|ref|XP_002196994.1| PREDICTED: polyadenylate-binding protein 4 [Taeniopygia guttata]
Length = 629
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 39/213 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+++ N D+D E+L LF K G +L +
Sbjct: 193 VYIKNFGDDMDDERLKELFGKYGK---------------------------TLSVKVMTD 225
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
T +S+GFGFV+ EEA KAVE + DI+G++L V +A + + R FE
Sbjct: 226 PTGKSKGFGFVSFEKHEEANKAVEEMNGKDINGKMLFVGRAQKKAERQAELKRRFEQLKQ 285
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +Y+ NL +D+ +L + FS G + +A+V+ E GRS+GFGFV SS
Sbjct: 286 ERLSRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSSP 343
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 344 EEATKAVTEMNGRIVGSKPLYVALAQRKEERKA 376
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 79/139 (56%), Gaps = 1/139 (0%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVG 285
S+G+ FV T + A++A+E + ++ R + V + R + + +Y+
Sbjct: 137 SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 286 NLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN 345
N ++D+ RL+++F ++GK ++ +V+ D TG+S+GFGFV+ E N A+ ++G++
Sbjct: 197 NFGDDMDDERLKELFGKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEEANKAVEEMNGKD 255
Query: 346 LDGRAIRVNVAEDRQRRSS 364
++G+ + V A+ + R +
Sbjct: 256 INGKMLFVGRAQKKAERQA 274
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P +YVG+L ++ A L + FS G V++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 338 IAALDGQNLD---GRAIRV 353
ALD N D G+ IR+
Sbjct: 66 ERALDTMNFDVIKGKPIRI 84
>gi|116780918|gb|ABK21879.1| unknown [Picea sitchensis]
Length = 172
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 55/78 (70%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L+ FS G+++ ++++ DRETGRSRGFGFVT S E + DAI
Sbjct: 9 YRCFVGGLAWATDDRSLQDAFSPFGEILESKIISDRETGRSRGFGFVTFSDEQSMRDAID 68
Query: 340 ALDGQNLDGRAIRVNVAE 357
A++G+ LDGR I VN A+
Sbjct: 69 AMNGKVLDGRNITVNPAQ 86
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F G EI E K +I +
Sbjct: 10 RCFVGGLAWATDDRSLQDAFSPFG--EILESK------------------------IISD 43
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT S + A++ + +DGR +TVN A
Sbjct: 44 RETGRSRGFGFVTFSDEQSMRDAIDAMNGKVLDGRNITVNPA 85
>gi|168988195|gb|ACA35266.1| nuclear transport family protein [Cucumis sativus]
Length = 565
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 9/103 (8%)
Query: 254 GRLLTVN---KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNAR 310
GR+L VN K P+ P E ++++VGNL W V + L Q F E+G VV AR
Sbjct: 2 GRILRVNFSDKPKPK------EPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGAR 55
Query: 311 VVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 353
V+YD ETG+SRG+GFV+ S+++E+ A+ ++ L+GR IRV
Sbjct: 56 VIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRV 98
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 26/109 (23%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
+E + P + KLFVGNL + V SE L F++ G V A
Sbjct: 16 KEPLYPETEYKLFVGNLSWSVTSEILTQAFQEYGNVVGA--------------------- 54
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV 259
+VIY+ ET +SRG+GFV+ ST E E A+E + +++GR++ V
Sbjct: 55 -----RVIYDGETGKSRGYGFVSYSTKSEMETALETINELELEGRVIRV 98
>gi|297804934|ref|XP_002870351.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
gi|297316187|gb|EFH46610.1| hypothetical protein ARALYDRAFT_493528 [Arabidopsis lyrata subsp.
lyrata]
Length = 154
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 57/79 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W D+ L F+ G+VV+A+V+ DRETGRSRGFGFV + E + AI+
Sbjct: 36 KLFVGGLSWGTDDQSLRDAFAHFGEVVDAKVIVDRETGRSRGFGFVNFNDEGAASAAISE 95
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG++L+GR IRVNVA +R
Sbjct: 96 MDGKDLNGRNIRVNVANER 114
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 46/110 (41%), Gaps = 26/110 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG L + D + L F G E+ + K VI +
Sbjct: 36 KLFVGGLSWGTDDQSLRDAFAHFG--EVVDAK------------------------VIVD 69
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 270
RET RSRGFGFV + A A+ D++GR + VN A R + P
Sbjct: 70 RETGRSRGFGFVNFNDEGAASAAISEMDGKDLNGRNIRVNVANERPSAPR 119
>gi|301119623|ref|XP_002907539.1| nucleolin, putative [Phytophthora infestans T30-4]
gi|262106051|gb|EEY64103.1| nucleolin, putative [Phytophthora infestans T30-4]
Length = 496
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
Query: 134 EAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKF 193
+AGE+ ++ ++ + P + ++F+ LP+ +++ F G V A +
Sbjct: 223 DAGEKSNKAHKQENGDAAAVANPQKTLEIFIAGLPWSATEDEVKEHFAGCGEVTGARIPL 282
Query: 194 HFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDID 253
+ RS G FVT +T E AE A+ M + D
Sbjct: 283 ----------------------------QNGRSSGTAFVTFATSEAAEAALAMDGQ-DFG 313
Query: 254 GRLLTVNKAAPRGT---QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNAR 310
GR + + A + +PE VF +GNL W+VD + + F E G++++ R
Sbjct: 314 GRWMKIRTAEKKNMFDEKPEGCTSVF-------IGNLSWDVDENTVRETFGECGEILSCR 366
Query: 311 VVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
+ DRETG RGFG V +S TE D L G ++GRAIRVN A+ R
Sbjct: 367 LATDRETGEFRGFGHVDFAS-TEAVDEAVKLAGSYVNGRAIRVNYAKSR 414
>gi|283781639|ref|YP_003372394.1| RNP-1 like RNA-binding protein [Pirellula staleyi DSM 6068]
gi|283440092|gb|ADB18534.1| RNP-1 like RNA-binding protein [Pirellula staleyi DSM 6068]
Length = 156
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 55/84 (65%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
RIYVGNLPW ++ LE +F G V A V+ DRETGRSRGFGFV M+++ + A+
Sbjct: 4 RIYVGNLPWTYSSSDLEALFKPFGDVAAAEVIMDRETGRSRGFGFVQMANDADCEPAVNG 63
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSS 364
L+G N +GR + VN A +R R +
Sbjct: 64 LNGTNCNGRPLVVNEARERAPRPA 87
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 26/109 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+++VGNLP+ S L LF+ G V AEV I +
Sbjct: 4 RIYVGNLPWTYSSSDLEALFKPFGDVAAAEV--------------------------IMD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
RET RSRGFGFV M+ + E AV + + +GR L VN+A R +P
Sbjct: 38 RETGRSRGFGFVQMANDADCEPAVNGLNGTNCNGRPLVVNEARERAPRP 86
>gi|258516441|ref|YP_003192663.1| RNP-1 like RNA-binding protein [Desulfotomaculum acetoxidans DSM
771]
gi|257780146|gb|ACV64040.1| RNP-1 like RNA-binding protein [Desulfotomaculum acetoxidans DSM
771]
Length = 82
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+Y+GNLPW LE+ FS++G V+NARV+ DRETGRSRGFGFV ++ E ++ IAA+
Sbjct: 5 LYIGNLPWSTKAEDLEEAFSKYGDVINARVISDRETGRSRGFGFVEVNDE-DVEKFIAAM 63
Query: 342 DGQNLDGRAIRVNVAEDRQ 360
+G +L GR I VN A+ R+
Sbjct: 64 NGTDLGGRVISVNEAKARE 82
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 27/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
L++GNLP+ +E L F K G V A +VI +R
Sbjct: 5 LYIGNLPWSTKAEDLEEAFSKYGDVINA--------------------------RVISDR 38
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET RSRGFGFV ++ E+ EK + + D+ GR+++VN+A R
Sbjct: 39 ETGRSRGFGFVEVND-EDVEKFIAAMNGTDLGGRVISVNEAKAR 81
>gi|260221788|emb|CBA30701.1| Glycine-rich RNA-binding protein GRP1A [Curvibacter putative
symbiont of Hydra magnipapillata]
Length = 149
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 58/84 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ + L+Q FS+HG V +A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 8 GNKLYVGNLPYSFRDEDLQQAFSQHGSVSSAKVMMERDTGRSKGFGFVEMGSDAEAQTAI 67
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
+A++GQ GR + VN A + R
Sbjct: 68 SAMNGQQFGGRGLVVNEARPMEPR 91
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 26/116 (22%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P KL+VGNLPY E L F + G+V A
Sbjct: 5 PSMGNKLYVGNLPYSFRDEDLQQAFSQHGSVSSA-------------------------- 38
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+V+ R+T RS+GFGFV M + EA+ A+ + GR L VN+A P +P R
Sbjct: 39 KVMMERDTGRSKGFGFVEMGSDAEAQTAISAMNGQQFGGRGLVVNEARPMEPRPPR 94
>gi|164659141|ref|XP_001730695.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
gi|159104592|gb|EDP43481.1| hypothetical protein MGL_2149 [Malassezia globosa CBS 7966]
Length = 190
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W + L Q FS +G++ + V+ DR++GRSRGFGFVT ++ E + AI A
Sbjct: 3 KVYVGNLSWSTTDDGLAQAFSPYGQLTDYIVMKDRDSGRSRGFGFVTFMTQQEADAAIMA 62
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L+ Q LDGR IRVN+A R
Sbjct: 63 LNEQELDGRRIRVNMANSR 81
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 26/103 (25%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
AK++VGNL + + LA F G + Y+ V+
Sbjct: 2 AKVYVGNLSWSTTDDGLAQAFSPYGQLTD----------------------YI----VMK 35
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+R++ RSRGFGFVT T +EA+ A+ + ++DGR + VN A
Sbjct: 36 DRDSGRSRGFGFVTFMTQQEADAAIMALNEQELDGRRIRVNMA 78
>gi|406835833|ref|ZP_11095427.1| RNP-1 like RNA-binding protein [Schlesneria paludicola DSM 18645]
Length = 104
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 60/78 (76%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNL + V +++LEQ+F+ HG V +A+V+ DRETGRS+GFGFV MS+ + + AI
Sbjct: 2 GKKLYVGNLSYGVTDSQLEQLFAAHGAVQSAQVIMDRETGRSKGFGFVEMSNAADADAAI 61
Query: 339 AALDGQNLDGRAIRVNVA 356
AL+G + DGRA+ VN A
Sbjct: 62 TALNGMDNDGRALTVNEA 79
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL Y V +L LF G V+ A QVI +
Sbjct: 4 KLYVGNLSYGVTDSQLEQLFAAHGAVQSA--------------------------QVIMD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RS+GFGFV MS +A+ A+ + D DGR LTVN+A P+
Sbjct: 38 RETGRSKGFGFVEMSNAADADAAITALNGMDNDGRALTVNEARPK 82
>gi|302406056|ref|XP_003000864.1| nucleolar protein [Verticillium albo-atrum VaMs.102]
gi|261360122|gb|EEY22550.1| nucleolar protein [Verticillium albo-atrum VaMs.102]
Length = 769
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 34/203 (16%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFV +LP D SE LA F + H F V V+ ++
Sbjct: 40 LFVRSLPPDATSESLADYFSQ-----------H---------------FPVKHATVVVDQ 73
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF- 280
T SRGFGFVT++ E+A +A + +GR +TV+ A R ++ E +
Sbjct: 74 ATKESRGFGFVTLTDAEDALEAKAKLNNELWEGRRITVDLAEARNR--DQNSSAIEEAWV 131
Query: 281 --RIYVGNLPWEVDN-ARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
++ + NLPW V A+L+ +F +GK+ A + + GR RGFGFVT+ E +A
Sbjct: 132 SPKLIIRNLPWSVKTPAQLQALFQSYGKIKFADLPMN--NGRLRGFGFVTIRGEKNAENA 189
Query: 338 IAALDGQNLDGRAIRVNVAEDRQ 360
I A++G+ +DGR I V+ A +++
Sbjct: 190 IKAMNGKGIDGRTIAVDWAVEKE 212
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%)
Query: 258 TVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRET 317
T N A QP+ E ++V +LP + + L FS+H V +A VV D+ T
Sbjct: 16 TANHHADGAPQPKSKKAKVEANRSLFVRSLPPDATSESLADYFSQHFPVKHATVVVDQAT 75
Query: 318 GRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
SRGFGFVT++ + +A A L+ + +GR I V++AE R R
Sbjct: 76 KESRGFGFVTLTDAEDALEAKAKLNNELWEGRRITVDLAEARNR 119
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 268 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
QPE A + +++ NLP+ + +L+ F+ G V ARVV DR T R G GFV
Sbjct: 327 QPEAAKKTTNNDSTVFIRNLPFTTTDEQLKSHFARFGPVRYARVVMDRATDRPAGTGFVC 386
>gi|357462751|ref|XP_003601657.1| Glycine-rich RNA-binding protein [Medicago truncatula]
gi|355490705|gb|AES71908.1| Glycine-rich RNA-binding protein [Medicago truncatula]
Length = 146
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G L + VD+ L F+ +G VV ARV+ DRETGRSRGFGFV +SE A+ +
Sbjct: 37 KLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFVNFTSEESATSAL-S 95
Query: 341 LDGQNLDGRAIRVNVAEDRQ 360
+DGQ+L+GR IRV+ A DRQ
Sbjct: 96 MDGQDLNGRNIRVSYANDRQ 115
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 27/114 (23%)
Query: 152 EFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFY 211
++ +KLF+G L Y+VD + L F G V A
Sbjct: 28 NYLRHMSSSKLFIGGLSYNVDDQSLRDAFTTYGDVVEA---------------------- 65
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+VI +RET RSRGFGFV ++ E A A+ M + D++GR + V+ A R
Sbjct: 66 ----RVITDRETGRSRGFGFVNFTSEESATSALSMDGQ-DLNGRNIRVSYANDR 114
>gi|326472146|gb|EGD96155.1| nucleolin protein Nsr1 [Trichophyton tonsurans CBS 112818]
Length = 479
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 38/213 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LFVGNL ++VD E L FE+ G + S +++
Sbjct: 238 ANLFVGNLSWNVDEEWLRSEFEEFGEL--------------------------SGTRIVT 271
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN--------KAAPRGTQPER 271
+RE+ RSRGFG+V VE+A KA ++DGR + ++ A PR R
Sbjct: 272 DRESGRSRGFGYVEFVNVEDAVKAHGAKKDAELDGRKMNLDYANARANGNANPRERADNR 331
Query: 272 AP----RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
A + +++GN+ + D ++++FS++G + R+ D ++GR +GFG+V
Sbjct: 332 AKSFGDQTSPESDTLFIGNISFSADENMVQELFSKYGTIQGIRLPTDPDSGRPKGFGYVQ 391
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
SS E A+ A G +L GR+IR++ + +Q
Sbjct: 392 FSSVDEARAALEAEHGADLGGRSIRLDFSTPKQ 424
>gi|297834512|ref|XP_002885138.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330978|gb|EFH61397.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 542
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 86/162 (53%), Gaps = 11/162 (6%)
Query: 211 YVSLLQVIYNRE-TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
Y ++ V+ R+ RSRGFGFV E A+KAV+ H + + L V KA R +
Sbjct: 223 YGTVSSVVVMRDGMGRSRGFGFVNFCHPENAKKAVDSLHGRQVGSKTLFVGKALKRDERR 282
Query: 270 ERAPRVFEPGF---------RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRS 320
E + F +YV NL +++ L ++F +G++V+A+V+ E GRS
Sbjct: 283 EMLKHKYRDNFIAKSNMRWSNLYVKNLSESMNDTTLREIFGRYGQIVSAKVM-RHENGRS 341
Query: 321 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
+GFGFV S+ E A L+G ++DG+ + V VAE ++ R
Sbjct: 342 KGFGFVCFSNREESKQAKRYLNGFSVDGKLLVVRVAERKEDR 383
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 5/142 (3%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF- 280
E +S+GFGFV T + A A H +DG+ L V K + ER GF
Sbjct: 144 ENGQSKGFGFVQFETEQSAVTARSALHGSMVDGKKLFVAKFINKN---ERVAMAGNKGFT 200
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+YV NL + L ++FS++G V + V+ D GRSRGFGFV A+ +
Sbjct: 201 NVYVKNLIENITEDILHRLFSQYGTVSSVVVMRD-GMGRSRGFGFVNFCHPENAKKAVDS 259
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
L G+ + + + V A R R
Sbjct: 260 LHGRQVGSKTLFVGKALKRDER 281
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
+ + N T +S + ++ + A A+ + D+ G+ + + + + R
Sbjct: 50 VHLCRNSVTGKSLCYAYINFDSPFSASNAMARLNHTDLKGKAMRIMWSQRDLSYRRRT-- 107
Query: 275 VFEPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
GF +YV NL + ++ LE++F+ G +++ +VV E G+S+GFGFV +E
Sbjct: 108 ----GFGNLYVKNLDISITSSGLERMFNPFGVILSCKVV--EENGQSKGFGFVQFETEQS 161
Query: 334 LNDAIAALDGQNLDGRAIRV 353
A +AL G +DG+ + V
Sbjct: 162 AVTARSALHGSMVDGKKLFV 181
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 27/124 (21%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+ L+V NL ++ L +F + G + A+V H
Sbjct: 302 SNLYVKNLSESMNDTTLREIFGRYGQIVSAKVMRH------------------------- 336
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
E RS+GFGFV S EE+++A + + +DG+LL V A + + +R + F
Sbjct: 337 --ENGRSKGFGFVCFSNREESKQAKRYLNGFSVDGKLLVVRVAERKEDRLKRLQQYFHAQ 394
Query: 280 FRIY 283
R Y
Sbjct: 395 PRHY 398
>gi|168704267|ref|ZP_02736544.1| RNA-binding region RNP-1 [Gemmata obscuriglobus UQM 2246]
Length = 137
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 60/82 (73%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNL W V +A L+++F+ +G VV+A+V+ DR+TGRS+GFGFV M S+ E AI
Sbjct: 2 GKKLYVGNLSWGVTDAMLQEMFTPYGAVVSAQVIMDRDTGRSKGFGFVEMGSDQEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQ 360
+ + GQ ++GR + VN A ++
Sbjct: 62 SGMHGQVIEGRPLTVNEARPKE 83
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 51/105 (48%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL + V L +F G V A QVI +
Sbjct: 4 KLYVGNLSWGVTDAMLQEMFTPYGAVVSA--------------------------QVIMD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
R+T RS+GFGFV M + +EA+ A+ H I+GR LTVN+A P+
Sbjct: 38 RDTGRSKGFGFVEMGSDQEAQAAISGMHGQVIEGRPLTVNEARPK 82
>gi|116791319|gb|ABK25933.1| unknown [Picea sitchensis]
Length = 221
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 58/79 (73%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R+++G L + +D+ L + F+E+G+V+ AR+++DRETGRSRGFGF++ +S E AI
Sbjct: 41 RLFIGGLSYGMDDQSLRESFTEYGEVIEARIIHDRETGRSRGFGFISFTSNEEAAAAITG 100
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG++L GR + VN A +R
Sbjct: 101 MDGKDLHGRLVHVNYATER 119
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
++LF+G L Y +D + L F + G E+ E + +I+
Sbjct: 40 SRLFIGGLSYGMDDQSLRESFTEYG--EVIEAR------------------------IIH 73
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RSRGFGF++ ++ EEA A+ D+ GRL+ VN A R
Sbjct: 74 DRETGRSRGFGFISFTSNEEAAAAITGMDGKDLHGRLVHVNYATER 119
>gi|336267120|ref|XP_003348326.1| hypothetical protein SMAC_02824 [Sordaria macrospora k-hell]
Length = 377
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 17/196 (8%)
Query: 181 EKAGTVEIAEVKFHFLFGNQGFHMWVCAVFY-------VSLLQVIYNRETDRSRGFGFVT 233
+KA T E+A+ K GN G+ + +F +V+ +RE+ RSRGFG+V
Sbjct: 155 KKAKTEEVADDKSTLWVGNLGWGIDDAILFAEFEECEGAKSARVVTDRESGRSRGFGYVD 214
Query: 234 MSTVEEAEKAVEMFHRYDIDGRLLTVN---KAAPRGTQPERAPRVFEPGFRI-------Y 283
++A+KA + ++GR + ++ K A Q + A R + G I +
Sbjct: 215 FENNDQAQKAYDAKSGGLLEGREMRLDFASKDAGNKPQAKAADRAAKHGDTISPESDTLF 274
Query: 284 VGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDG 343
VGN+P+ D + + F+ V + R+ D+E+GR +GF +VT +S + +A L+G
Sbjct: 275 VGNMPFTADESAVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSIEDAKNAFDQLNG 334
Query: 344 QNLDGRAIRVNVAEDR 359
+L GR +R++ A+ R
Sbjct: 335 SDLQGRPVRLDYAKPR 350
>gi|409044525|gb|EKM54006.1| hypothetical protein PHACADRAFT_257571 [Phanerochaete carnosa
HHB-10118-sp]
Length = 155
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 55/79 (69%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W + L FS+ G+++++ V+ DR+TGRSRGFGFVT SS E AI +
Sbjct: 4 KVYVGNLSWNTTDDSLRTAFSQFGQILDSIVMRDRDTGRSRGFGFVTFSSANEAQTAITS 63
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L+ Q LDGR IRVN+A R
Sbjct: 64 LNEQELDGRRIRVNLANAR 82
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
AK++VGNL ++ + L F + G + + + V+
Sbjct: 3 AKVYVGNLSWNTTDDSLRTAFSQFGQI-LDSI-------------------------VMR 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+R+T RSRGFGFVT S+ EA+ A+ + ++DGR + VN A R
Sbjct: 37 DRDTGRSRGFGFVTFSSANEAQTAITSLNEQELDGRRIRVNLANAR 82
>gi|224130158|ref|XP_002328668.1| predicted protein [Populus trichocarpa]
gi|222838844|gb|EEE77195.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 60/83 (72%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+I++G + ++ D+ L++ F ++G VV ++ DR+TGRSRGFGFVT +S E + AI A
Sbjct: 41 KIFIGGISFQTDDNGLKEAFDKYGNVVEGIIIMDRDTGRSRGFGFVTYTSSEEASSAIQA 100
Query: 341 LDGQNLDGRAIRVNVAEDRQRRS 363
+DGQ+L GR +RVN A +R +R+
Sbjct: 101 MDGQDLHGRRVRVNYATERPQRT 123
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 29/112 (25%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+K+F+G + + D L F+K G V +G +I
Sbjct: 40 SKIFIGGISFQTDDNGLKEAFDKYGNVV------------EGI--------------IIM 73
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+R+T RSRGFGFVT ++ EEA A++ D+ GR + VN A R P+R
Sbjct: 74 DRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDLHGRRVRVNYATER---PQR 122
>gi|392570008|gb|EIW63181.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 126
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 56/79 (70%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W + L FS +G+++++ V+ DR+TGRSRGFGFVT SS E AI++
Sbjct: 4 KVYVGNLSWNTTDDSLRSAFSNYGQILDSIVMRDRDTGRSRGFGFVTFSSSGEAQTAISS 63
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L+ Q LDGR I+VN+A R
Sbjct: 64 LNEQELDGRRIKVNLANAR 82
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K++VGNL ++ + L F G + + + V+ +
Sbjct: 4 KVYVGNLSWNTTDDSLRSAFSNYGQI-LDSI-------------------------VMRD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
R+T RSRGFGFVT S+ EA+ A+ + ++DGR + VN A R
Sbjct: 38 RDTGRSRGFGFVTFSSSGEAQTAISSLNEQELDGRRIKVNLANAR 82
>gi|829254|emb|CAA49174.1| glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 139
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G L W D+A L F+ G VV+A+V+ DRETGRSRGFGFV + E AI+
Sbjct: 17 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 76
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG+ L+GR IRVN A DR
Sbjct: 77 MDGKELNGRHIRVNPANDR 95
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 26/110 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLF+G L + D L F G V A +VI +
Sbjct: 17 KLFIGGLSWGTDDASLRDAFAHFGDVVDA--------------------------KVIVD 50
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 270
RET RSRGFGFV + A A+ +++GR + VN A R + P
Sbjct: 51 RETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 100
>gi|30682622|ref|NP_849377.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657934|gb|AEE83334.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 153
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G L W D+A L F+ G VV+A+V+ DRETGRSRGFGFV + E AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG+ L+GR IRVN A DR
Sbjct: 96 MDGKELNGRHIRVNPANDR 114
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 26/110 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLF+G L + D L F G V A +VI +
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDA--------------------------KVIVD 69
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 270
RET RSRGFGFV + A A+ +++GR + VN A R + P
Sbjct: 70 RETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 119
>gi|15236359|ref|NP_193121.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|25090505|sp|Q9SVM8.1|GRP2_ARATH RecName: Full=Glycine-rich RNA-binding protein 2, mitochondrial;
Short=AtGRP2; Flags: Precursor
gi|4455314|emb|CAB36849.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|7268089|emb|CAB78427.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|18252853|gb|AAL62353.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|21553749|gb|AAM62842.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gi|25084267|gb|AAN72208.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gi|332657933|gb|AEE83333.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 158
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G L W D+A L F+ G VV+A+V+ DRETGRSRGFGFV + E AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG+ L+GR IRVN A DR
Sbjct: 96 MDGKELNGRHIRVNPANDR 114
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 26/110 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLF+G L + D L F G V A +VI +
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDA--------------------------KVIVD 69
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 270
RET RSRGFGFV + A A+ +++GR + VN A R + P
Sbjct: 70 RETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 119
>gi|145333039|ref|NP_001078385.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657935|gb|AEE83335.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 144
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G L W D+A L F+ G VV+A+V+ DRETGRSRGFGFV + E AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG+ L+GR IRVN A DR
Sbjct: 96 MDGKELNGRHIRVNPANDR 114
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 26/110 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLF+G L + D L F G V A +VI +
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDA--------------------------KVIVD 69
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 270
RET RSRGFGFV + A A+ +++GR + VN A R + P
Sbjct: 70 RETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 119
>gi|380091978|emb|CCC10246.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 456
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 17/196 (8%)
Query: 181 EKAGTVEIAEVKFHFLFGNQGFHMWVCAVFY-------VSLLQVIYNRETDRSRGFGFVT 233
+KA T E+A+ K GN G+ + +F +V+ +RE+ RSRGFG+V
Sbjct: 155 KKAKTEEVADDKSTLWVGNLGWGIDDAILFAEFEECEGAKSARVVTDRESGRSRGFGYVD 214
Query: 234 MSTVEEAEKAVEMFHRYDIDGRLLTVN---KAAPRGTQPERAPRVFEPGFRI-------Y 283
++A+KA + ++GR + ++ K A Q + A R + G I +
Sbjct: 215 FENNDQAQKAYDAKSGGLLEGREMRLDFASKDAGNKPQAKAADRAAKHGDTISPESDTLF 274
Query: 284 VGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDG 343
VGN+P+ D + + F+ V + R+ D+E+GR +GF +VT +S + +A L+G
Sbjct: 275 VGNMPFTADESAVSDFFNSVASVASLRIPTDQESGRPKGFAYVTFNSIEDAKNAFDQLNG 334
Query: 344 QNLDGRAIRVNVAEDR 359
+L GR +R++ A+ R
Sbjct: 335 SDLQGRPVRLDYAKPR 350
>gi|168035555|ref|XP_001770275.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678492|gb|EDQ64950.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 106
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 52/77 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W + LE+ F G+VV +V+ DRETGRSRGFGFVT + E +N+AI
Sbjct: 2 FRCFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIK 61
Query: 340 ALDGQNLDGRAIRVNVA 356
++G+ LDGR I VN A
Sbjct: 62 DMNGKELDGRNITVNQA 78
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
V +VI +RET RSRGFGFVT + +A++ + ++DGR +TVN+A
Sbjct: 28 VVQCKVITDRETGRSRGFGFVTFADENSMNEAIKDMNGKELDGRNITVNQA 78
>gi|145333041|ref|NP_001078386.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
gi|332657936|gb|AEE83336.1| glycine-rich RNA-binding protein 2 [Arabidopsis thaliana]
Length = 129
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G L W D+A L F+ G VV+A+V+ DRETGRSRGFGFV + E AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG+ L+GR IRVN A DR
Sbjct: 96 MDGKELNGRHIRVNPANDR 114
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 42/105 (40%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLF+G L + D L F G V A +VI +
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDA--------------------------KVIVD 69
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGFV + A A+ +++GR + VN A R
Sbjct: 70 RETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDR 114
>gi|7446337|pir||T15542 hypothetical protein C18A3.5 - Caenorhabditis elegans
Length = 448
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL------ 215
L+VGNL V + +A LF + G+V +V F F +W Y LL
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDV-----SFSLWNKTNLYRKLLLARGIG 102
Query: 216 ---------QVIY-NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
Q I+ + ET + + FV S +A +A++ ++ + R + VN A
Sbjct: 103 VPGYKCTRRQPIHTDTETGSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKVNWAVEP 162
Query: 266 GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 325
G Q + F ++VG+L EVDN +L + F G V +A+V+ D T +S+G+GF
Sbjct: 163 GQQQSKIDTTRH--FHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGF 220
Query: 326 VTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
V+ E AI ++GQ L R IR N A
Sbjct: 221 VSYPKREEAERAIEQMNGQWLGRRTIRTNWA 251
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 91/217 (41%), Gaps = 45/217 (20%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCA 208
+++ ++ +FVG+L +VD++KL F+ G V A
Sbjct: 164 QQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDA------------------- 204
Query: 209 VFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ 268
+VI + T +S+G+GFV+ EEAE+A+E + + R + N A +
Sbjct: 205 -------KVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGD 257
Query: 269 PERAPRVFEPGF------------RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRE 316
E+ E + +YVGN+ + + Q F+ G++ R+
Sbjct: 258 QEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIA-SLTEDEIRQGFASFGRITEVRIF---- 312
Query: 317 TGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRV 353
+ +G+ FV ++ AI ++ Q++ G+ +R
Sbjct: 313 --KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRC 347
>gi|218202644|gb|EEC85071.1| hypothetical protein OsI_32418 [Oryza sativa Indica Group]
Length = 821
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 76/130 (58%), Gaps = 14/130 (10%)
Query: 229 FGFVTMSTVEEAEKAVEMFHRYDIDGR--LLTVNKAAPRGTQ----PERAPRV------- 275
FG VTM+TV+++ V + + LL V A R Q E A +
Sbjct: 464 FGVVTMTTVQKSADIVAALDKRGLLDLHPLLAVEFAEQRPRQEWILTEAALAIAPTTVHS 523
Query: 276 FEPG-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
F P F IYVGNL W+VD RL + F EHG+V+ A+VV R+TGRSRGFGFV+M++ E
Sbjct: 524 FSPKDFSIYVGNLRWDVDRLRLLKFFGEHGRVLVAQVVCYRQTGRSRGFGFVSMATLREP 583
Query: 335 NDAIAALDGQ 344
+D IA+L+GQ
Sbjct: 584 DDVIASLNGQ 593
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 26/88 (29%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P+D ++VGNL +DVD +L F + G V +A Q
Sbjct: 526 PKDFSIYVGNLRWDVDRLRLLKFFGEHGRVLVA--------------------------Q 559
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAV 244
V+ R+T RSRGFGFV+M+T+ E + +
Sbjct: 560 VVCYRQTGRSRGFGFVSMATLREPDDVI 587
>gi|2826811|emb|CAA05727.1| AtGRP2 [Arabidopsis thaliana]
Length = 150
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G L W D+A L F+ G VV+A+V+ DRETGRSRGFGFV + E AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG+ L+GR IRVN A DR
Sbjct: 96 MDGKELNGRHIRVNPANDR 114
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 26/110 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLF+G L + D L F G V A +VI +
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDA--------------------------KVIVD 69
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 270
RET RSRGFGFV + A A+ +++GR + VN A R + P
Sbjct: 70 RETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDRPSAPR 119
>gi|422295561|gb|EKU22860.1| glycine-rich rna-binding protein 4 [Nannochloropsis gaditana
CCMP526]
Length = 186
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 68/111 (61%), Gaps = 4/111 (3%)
Query: 250 YDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNA 309
YD G V +A PR T P ++ E G++++VGNL + ++A L + F G++V +
Sbjct: 4 YDAYGVPAPVAEAPPRPTSPGQS----EEGYKLFVGNLSFRTESAALREAFEPFGRIVFS 59
Query: 310 RVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
V+ +RETG+SRGFGFV + E + AI+ +D LDGR +RVN A R+
Sbjct: 60 TVIENRETGQSRGFGFVVYEQKHEADAAISRMDNAELDGRTLRVNFARPRE 110
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 26/108 (24%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E KLFVGNL + +S L FE G + + V
Sbjct: 28 EGYKLFVGNLSFRTESAALREAFEPFGRIVFS--------------------------TV 61
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
I NRET +SRGFGFV EA+ A+ ++DGR L VN A PR
Sbjct: 62 IENRETGQSRGFGFVVYEQKHEADAAISRMDNAELDGRTLRVNFARPR 109
>gi|469072|dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
Length = 165
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W + L + FS++G+V+ ++++ DRETGRSRGFGFVT E + DAI
Sbjct: 6 YRCFVGGLAWATTDRTLGEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMRDAIE 65
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ+LDGR I VN A+
Sbjct: 66 GMNGQDLDGRNITVNEAQ 83
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
++I +RET RSRGFGFVT + A+E + D+DGR +TVN+A
Sbjct: 36 KIINDRETGRSRGFGFVTFGDEKSMRDAIEGMNGQDLDGRNITVNEA 82
>gi|399931803|gb|AFP57451.1| RNA-binding glycine-rich protein [Nicotiana plumbaginifolia]
Length = 144
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 56/82 (68%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W D+ L F+ G VV+ARV+ DR++GR RGFGFV S + N+AI A
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDARVIVDRDSGRPRGFGFVNFSDDECANEAIKA 98
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
+DGQ L GR IRV++A++R R
Sbjct: 99 MDGQELQGRNIRVSIAQERAPR 120
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 32/114 (28%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG L + D + L F G V A +VI +
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDA--------------------------RVIVD 72
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
R++ R RGFGFV S E A +A++ ++ GR + V+ A ERAPR
Sbjct: 73 RDSGRPRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIA------QERAPR 120
>gi|392558545|gb|EIW51732.1| polyadenylate binding protein [Trametes versicolor FP-101664 SS1]
Length = 631
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 38/211 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V N+ +V E+ LFE G + A +LQV
Sbjct: 190 IYVKNVDPEVTQEEFVQLFEPFGRITSA------------------------VLQV---D 222
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
+ +SRGFGFV T EEA AVE H D+ GR L V +A + + E R +E
Sbjct: 223 DEGKSRGFGFVNFDTHEEAHAAVEALHDSDVKGRKLFVARAQKKAEREEELRRSYEQAKM 282
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +Y+ NL ++D+ RL F G + +A+V+ D E G S+GFGFV SS
Sbjct: 283 EKMSKYQGVNLYIKNLEDDIDDERLRGEFEPFGNITSAKVMRD-EKGISKGFGFVCFSSP 341
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
E A+A ++ + + + + V++A+ R+ R
Sbjct: 342 DEATKAVAEMNNKMIGTKPLYVSLAQRREVR 372
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
V+ ++V + T RS G+ +V + E+A+E + I GR A R +R
Sbjct: 33 VASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSLIKGR-------ACRIMWSQR 85
Query: 272 APRVFEPG-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
P + + G I++ NL ++DN L F+ G V++ +V D E GRS+G+GFV +
Sbjct: 86 DPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATD-EHGRSKGYGFVHYET 144
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
AI A++G L+ + + V R+ R S
Sbjct: 145 AEAAETAIKAVNGMLLNDKKVYVGHHISRKERQS 178
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 2/164 (1%)
Query: 199 NQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 258
N+ H A V +V + E RS+G+GFV T E AE A++ + ++ + +
Sbjct: 108 NKALHDTFAAFGNVLSCKVATD-EHGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVY 166
Query: 259 VNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 318
V R + + + IYV N+ EV Q+F G++ +A + D E G
Sbjct: 167 VGHHISRKERQSKIEEMKNQFTNIYVKNVDPEVTQEEFVQLFEPFGRITSAVLQVDDE-G 225
Query: 319 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
+SRGFGFV + E + A+ AL ++ GR + V A+ + R
Sbjct: 226 KSRGFGFVNFDTHEEAHAAVEALHDSDVKGRKLFVARAQKKAER 269
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P +YVG L V A L ++F+ G V + RV D T RS G+ +V + + A
Sbjct: 5 PSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERA 64
Query: 338 IAALDGQNLDGRAIRV 353
+ L+ + GRA R+
Sbjct: 65 LEQLNYSLIKGRACRI 80
>gi|383760540|ref|YP_005439526.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
gi|381381210|dbj|BAL98027.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
Length = 161
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 58/82 (70%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNL + V + L+Q F++ G V +A+V+ DRETGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLAYSVRDDSLQQAFAQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQ 360
++GQ L+GRAI VN A R+
Sbjct: 62 NGMNGQPLEGRAIVVNEARPRE 83
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL Y V + L F + GTV A +V+ +
Sbjct: 4 KLYVGNLAYSVRDDSLQQAFAQFGTVTSA--------------------------KVMMD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RS+GFGFV M + EA+ A+ + ++GR + VN+A PR
Sbjct: 38 RETGRSKGFGFVEMGSDAEAQAAINGMNGQPLEGRAIVVNEARPR 82
>gi|121604834|ref|YP_982163.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
gi|120593803|gb|ABM37242.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
Length = 132
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 59/84 (70%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + L+Q F + G V +A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLPYTVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
A ++GQ+L GR+I VN A + R
Sbjct: 62 AGMNGQSLGGRSITVNEARPMEAR 85
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 26/111 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V E L F + G V A +V+
Sbjct: 4 KLYVGNLPYTVRDEDLQQSFGQFGAVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
R+T RS+GFGFV M + EA+ A+ + + GR +TVN+A P +P R
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAIAGMNGQSLGGRSITVNEARPMEARPPR 88
>gi|302338833|ref|YP_003804039.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
gi|301636018|gb|ADK81445.1| RNP-1 like RNA-binding protein [Spirochaeta smaragdinae DSM 11293]
Length = 93
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 57/82 (69%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL + LE +F ++G+VV+A++V DRET RSRGFGFV M + AI+A
Sbjct: 4 KLYVGNLSYSSTEPGLEDLFGQYGQVVSAKIVLDRETKRSRGFGFVEMEQDDAAEAAISA 63
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
LDG DGR +RVN A +R+RR
Sbjct: 64 LDGYEFDGRRLRVNEAMERERR 85
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 50/111 (45%), Gaps = 26/111 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL Y L LF + G V A +++ +
Sbjct: 4 KLYVGNLSYSSTEPGLEDLFGQYGQVVSA--------------------------KIVLD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
RET RSRGFGFV M + AE A+ Y+ DGR L VN+A R +P R
Sbjct: 38 RETKRSRGFGFVEMEQDDAAEAAISALDGYEFDGRRLRVNEAMERERRPRR 88
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 31/206 (15%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+++VG L ++VD++ L E +FG V+ +V +
Sbjct: 214 QIWVGQLSWNVDNDWLKSEME--------------VFGE------------VTSARVQLD 247
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE--- 277
R + +SRGFG+V +T A+KA + ++DGR + ++ + P+G E + F
Sbjct: 248 RTSGKSRGFGYVDFATAAAAKKAFDEGQGKEVDGRAIRIDLSTPKGDVTENRAKKFNDQR 307
Query: 278 --PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
P +++GNL ++V + FSEHG+V R+ D ++GR +GFG+V +++
Sbjct: 308 SAPSSTLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQ 367
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQR 361
AI A+ GQ L GR +R++ + R R
Sbjct: 368 AAIDAMTGQELAGRPLRLDFSTPRDR 393
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 58/79 (73%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L + D L FS +G++++A+++ DR+TGRSRGFGF+T ++E + + AI A
Sbjct: 32 KLFVGGLSYTTDEGSLRDAFSHYGEIIDAKIIVDRDTGRSRGFGFITYAAEEQASSAIMA 91
Query: 341 LDGQNLDGRAIRVNVAEDR 359
LDG++L GR +RV+ A +R
Sbjct: 92 LDGKDLHGRNLRVSAATER 110
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 46/106 (43%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLFVG L Y D L F G EI + K +I
Sbjct: 31 SKLFVGGLSYTTDEGSLRDAFSHYG--EIIDAK------------------------IIV 64
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+R+T RSRGFGF+T + E+A A+ D+ GR L V+ A R
Sbjct: 65 DRDTGRSRGFGFITYAAEEQASSAIMALDGKDLHGRNLRVSAATER 110
>gi|410956870|ref|XP_003985059.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Felis catus]
Length = 486
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 20/221 (9%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF--YVSLL 215
+D +LFVG D E A L KA +K FG+ + VF Y L
Sbjct: 262 KDCRLFVGRFKNRKDRE--AELRNKANEFTNVYIKN---FGDDMDDERLKEVFSKYGKTL 316
Query: 216 QV-IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
V + + +S+GFGFV+ + E A+KAVE + DI+G+LL V +A + + +
Sbjct: 317 SVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGKDINGQLLFVGRAQKKSERQAELKQ 376
Query: 275 VFE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFG 324
VFE G ++Y+ NL +D+ +L + FS G + +RV RE GRS+GFG
Sbjct: 377 VFEQLKQERFRRCQGMKLYIKNLDDTIDDEKLWREFSSFGSI--SRVKIMREEGRSKGFG 434
Query: 325 FVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
+ SS E A+A ++G+ L + + + +A+ R+++
Sbjct: 435 LICFSSPEEATKAMAEMNGRILGSKPLYIALAQKPXERNAY 475
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 93/204 (45%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV + +LF+K TV V +++
Sbjct: 109 ASLYVGDLHADVTED---LLFKKFSTVGP-----------------------VLSIRICR 142
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ +V + +A++A++ + I G+ + R +R + + G
Sbjct: 143 DLVTRRSLGYAYVNFLKLADAQRALDTMNFDTIKGKPI-------RLMWSQRDAYLRKSG 195
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN L + FS GK+++++V+ D + SRG+ FV ++ + AI
Sbjct: 196 IGNVFIKNLDRSIDNKTLYEHFSAFGKILSSKVMSDDQG--SRGYAFVHFQNQIAADRAI 253
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L + V ++R+ R
Sbjct: 254 EEMNGALLKDCRLFVGRFKNRKDR 277
>gi|46806499|dbj|BAD17623.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806518|dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
Length = 374
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 33/202 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
K+FVG + ++ E + FEK G + + ++
Sbjct: 66 GKIFVGGVAWETTEESFSKHFEKYGAITDS--------------------------VIMK 99
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEP 278
++ T RGFGFVT S +K +E H IDGR + V + PR + P+
Sbjct: 100 DKHTKMPRGFGFVTFSDPSVIDKVLEDEHV--IDGRTVEVKRTVPREEMSSKDGPKTR-- 155
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+I+VG LP + L + FS +GK+V +++ D TGRSRGFGFVT SE + I
Sbjct: 156 --KIFVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVI 213
Query: 339 AALDGQNLDGRAIRVNVAEDRQ 360
+ ++L G+ + + AE ++
Sbjct: 214 SEGRMRDLGGKQVEIKKAEPKK 235
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 271 RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
RAP G +I+VG + WE + F ++G + ++ ++ D+ T RGFGFVT S
Sbjct: 58 RAPGGDSSG-KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSD 116
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
+ ++ + D +DGR + V R+ SS
Sbjct: 117 PSVIDKVLE--DEHVIDGRTVEVKRTVPREEMSS 148
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 26/117 (22%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCA 208
EE + P+ K+FVG LP + ++L F G +I E
Sbjct: 144 EEMSSKDGPKTRKIFVGGLPSSLTEDELREHFSPYG--KIVE------------------ 183
Query: 209 VFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
Q++ + T RSRGFGFVT + + E+ + D+ G+ + + KA P+
Sbjct: 184 ------HQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 234
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 58/81 (71%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG + + D+ L + F+ +G+V++ +V+ DRETGRSRGFGF+T ++ + + AI
Sbjct: 41 KLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFITFATSEDASSAIQG 100
Query: 341 LDGQNLDGRAIRVNVAEDRQR 361
+DGQ+L GR IRVN A +R R
Sbjct: 101 MDGQDLHGRRIRVNYATERSR 121
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 26/112 (23%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
+ AKLFVG + Y D L F + G E+ +VK
Sbjct: 34 IRSMSSAKLFVGGISYSTDDMSLRESFARYG--EVIDVK--------------------- 70
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
VI +RET RSRGFGF+T +T E+A A++ D+ GR + VN A R
Sbjct: 71 ---VIMDRETGRSRGFGFITFATSEDASSAIQGMDGQDLHGRRIRVNYATER 119
>gi|319762031|ref|YP_004125968.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330826150|ref|YP_004389453.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
gi|317116592|gb|ADU99080.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329311522|gb|AEB85937.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
Length = 102
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 60/85 (70%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
R+YVGNL + V + L Q FS+ G V +A+V+ +R+TGRS+GFGFV M+S E +AI
Sbjct: 4 RLYVGNLAYSVRDESLVQQFSQFGAVTSAKVMMERDTGRSKGFGFVEMASGAEAQEAING 63
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSSF 365
L G+++DGRA+ VNVA + R SF
Sbjct: 64 LHGKSVDGRALTVNVARPMEARPSF 88
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 55/121 (45%), Gaps = 26/121 (21%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+L+VGNL Y V E L F + G V A +V+
Sbjct: 4 RLYVGNLAYSVRDESLVQQFSQFGAVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF 280
R+T RS+GFGFV M++ EA++A+ H +DGR LTVN A P +P G+
Sbjct: 38 RDTGRSKGFGFVEMASGAEAQEAINGLHGKSVDGRALTVNVARPMEARPSFGGGADRGGY 97
Query: 281 R 281
R
Sbjct: 98 R 98
>gi|21388660|dbj|BAC00786.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 178
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 52/77 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W + LE+ F G+VV +V+ DRETGRSRGFGFVT + E +N+AI
Sbjct: 5 FRCFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIK 64
Query: 340 ALDGQNLDGRAIRVNVA 356
++G+ LDGR I VN A
Sbjct: 65 DMNGKELDGRNITVNQA 81
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
V +VI +RET RSRGFGFVT + +A++ + ++DGR +TVN+A
Sbjct: 31 VVQCKVITDRETGRSRGFGFVTFADENSMNEAIKDMNGKELDGRNITVNQA 81
>gi|348666125|gb|EGZ05953.1| hypothetical protein PHYSODRAFT_348578 [Phytophthora sojae]
Length = 356
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 101/213 (47%), Gaps = 43/213 (20%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
V+P +++VGNL ++V ++L +KAGTV A+V
Sbjct: 172 VKPKRGFRVYVGNLSWNVKWQELKDHMKKAGTVVHADV---------------------- 209
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL-----------TVNKA 262
RS+G G V +T EEA KA+ + +++GRL+ +++K
Sbjct: 210 -----LEEPNGRSKGCGLVEYATQEEAAKAIAELNNTELEGRLIFVREDREPEGGSISKF 264
Query: 263 APRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
A R APR G ++YVGNLPWE + +L+ +F G V A + + GRSRG
Sbjct: 265 AKRAA----APRGSGEGRQLYVGNLPWETNWQQLKDLFRTVGDVERADIA-EYPDGRSRG 319
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 355
FG + ++ + AI L+G ++GR I V +
Sbjct: 320 FGIIRYTNAADAWQAIERLNGLEIEGRLIEVRL 352
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 96/201 (47%), Gaps = 34/201 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+++VGNL + + + L + AG VE+A V L N
Sbjct: 89 CRVYVGNLSWSIKWQDLKDHMQAAGPVELATV----LESN-------------------- 124
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
RS+G G VT T E A+ A+ + ++ GR + V + R QP A + + G
Sbjct: 125 ----GRSKGCGIVTYETEEAAQNAIATLNDTELGGRKIFVRE--DREAQPVSAVKP-KRG 177
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR+YVGNL W V L+ + G VV+A V+ + GRS+G G V +++ E AIA
Sbjct: 178 FRVYVGNLSWNVKWQELKDHMKKAGTVVHADVL-EEPNGRSKGCGLVEYATQEEAAKAIA 236
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
L+ L+GR I V EDR+
Sbjct: 237 ELNNTELEGRLIFVR--EDRE 255
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G R+YVGNL W + L+ G V A V+ GRS+G G VT +E +AI
Sbjct: 88 GCRVYVGNLSWSIKWQDLKDHMQAAGPVELATVL--ESNGRSKGCGIVTYETEEAAQNAI 145
Query: 339 AALDGQNLDGRAIRVNVAEDRQ 360
A L+ L GR ++ V EDR+
Sbjct: 146 ATLNDTELGGR--KIFVREDRE 165
>gi|328852276|gb|EGG01423.1| hypothetical protein MELLADRAFT_39080 [Melampsora larici-populina
98AG31]
Length = 701
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 38/211 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
L++ NLP +V +E+L +F K G V A V+
Sbjct: 240 LYIKNLPTEVTTEELNEMFSKYGPVTSAAVQAD--------------------------- 272
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
E+ + RGFGFV E A KAVE H D G +L V +A R + R E
Sbjct: 273 ESGKHRGFGFVNYENHESASKAVEALHDKDYKGNILYVARAQKRVERDAELRRAHEQQKY 332
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +Y+ NL E D+ +L+ F G + + +V+ D + G SRGFGFV S+
Sbjct: 333 ETTLKYQGVNLYIKNLDDEYDDEKLQAEFLPFGTITSCKVMKD-DKGVSRGFGFVCFSAP 391
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
E A+A ++G+ L + + V++A+ + R
Sbjct: 392 DEATKAVAEMNGKMLGSKPLYVSLAQRKDVR 422
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
Query: 223 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRI 282
T S+G+GFV T E AE A++ + ++ +++ V PR + + V +
Sbjct: 181 TGASKGYGFVHYVTAESAEAAIKGVNGMQLNDKVVFVGIHVPRRERQAKIDEVRAHFTNL 240
Query: 283 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 342
Y+ NLP EV L ++FS++G V +A V D E+G+ RGFGFV + + A+ AL
Sbjct: 241 YIKNLPTEVTTEELNEMFSKYGPVTSAAVQAD-ESGKHRGFGFVNYENHESASKAVEALH 299
Query: 343 GQNLDGRAIRVNVAEDRQRRSS 364
++ G + V A+ R R +
Sbjct: 300 DKDYKGNILYVARAQKRVERDA 321
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
+P +YVG L V A L ++FS G V + RV D T RS G+ +V + +
Sbjct: 54 QPNTSLYVGELDPTVTEAMLYEIFSMIGPVSSIRVCRDAVTRRSLGYAYVNYLNAADAER 113
Query: 337 AIAALDGQNLDGRAIRV 353
A+ L+ + +A R+
Sbjct: 114 ALEQLNYSLIKNKACRI 130
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 101/204 (49%), Gaps = 32/204 (15%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFVG+L ++VD L FE+ G EIA V+ V+ +R
Sbjct: 304 LFVGSLSWNVDEGWLRNEFEQFG--EIAAVR------------------------VVTDR 337
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER-APRVF---- 276
E+ RS+GFG+V +T E A+KA+E DIDGR + V+ +APR P + R++
Sbjct: 338 ESGRSKGFGYVEYTTNEAAKKALEEMKGKDIDGRTINVDFSAPRPENPRQDRSRLYGDQK 397
Query: 277 EP-GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
P ++V NL +E D ++ F G +V R+ D E+G+ +GF ++
Sbjct: 398 SPESETVFVANLSFEADEQIVQTEFEGFGNIVGLRIPTDPESGQPKGFCYIQYDRVDSAR 457
Query: 336 DAIAALDGQNLDGRAIRVNVAEDR 359
A+ ++G + GRAIR + + R
Sbjct: 458 KAVEEMNGALVAGRAIRTDFSTPR 481
>gi|2226370|gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
Length = 156
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 55/78 (70%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W + L FS++G++++++++ DRETGRSRGFGFVT E + DAI
Sbjct: 6 YRCFVGGLAWATTDQTLGDAFSQYGEILDSKIINDRETGRSRGFGFVTFKDEQAMRDAIE 65
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ+LDGR I VN A+
Sbjct: 66 GMNGQDLDGRNITVNEAQ 83
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
++I +RET RSRGFGFVT + A+E + D+DGR +TVN+A
Sbjct: 36 KIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEA 82
>gi|449019177|dbj|BAM82579.1| probable heterogeneous nuclear RNP protein A [Cyanidioschyzon
merolae strain 10D]
Length = 273
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 96/219 (43%), Gaps = 43/219 (19%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K+FVG L +D + L FE+ G V + AV V+ N
Sbjct: 9 KVFVGGLSWDTNEASLVAYFERFGKV-------------------IDAV-------VMRN 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE--- 277
RET + RGFGFVT E +AV R+++DGRL+ A P+ + + V +
Sbjct: 43 RETGQPRGFGFVTFEE-EGVAQAVASLERHELDGRLVETKVAVPKSAEDPESNTVVDTAQ 101
Query: 278 ----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
P R+YV LP L FS G + RVV D TG S+G+GFV
Sbjct: 102 RYGPSGLGEKPSRRVYVSGLPQACTEDDLRAFFSRFGSLEAVRVVVDHHTGLSKGYGFVV 161
Query: 328 MSSETELNDAIAALDGQN--LDGRAIRVNVAEDRQRRSS 364
+ET + + +LD +N + G A RV V R SS
Sbjct: 162 F-AETAASQKVQSLDPENFVIRGSAFRVKVRCCRNNESS 199
>gi|255085602|ref|XP_002505232.1| predicted protein [Micromonas sp. RCC299]
gi|226520501|gb|ACO66490.1| predicted protein [Micromonas sp. RCC299]
Length = 211
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 99/201 (49%), Gaps = 31/201 (15%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
AKL+VG+LP +++E++ +F+ G V + VI
Sbjct: 33 AKLYVGHLPSTMNAERMLEMFKPFGRV--------------------------LQIDVIP 66
Query: 220 NRETDRS-RGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN-KAAPRGT-QPERAPRV- 275
+RE S +GF FV ST EEA A + + + ++G+ + V KA PR +P AP
Sbjct: 67 DRERQLSCKGFAFVLFSTPEEA-IAAKALNGHVVEGKSIDVRLKAEPRAPREPVNAPVAP 125
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
++YV +P L+ + +G + RV+ DRETGRSRGFGF M E +
Sbjct: 126 VNDDAKLYVAYMPDHYRAEELKMLLQPYGLPSDVRVITDRETGRSRGFGFAQMMDEQQAM 185
Query: 336 DAIAALDGQNLDGRAIRVNVA 356
AI L+GQ LDG+ + V +A
Sbjct: 186 AAIQGLNGQMLDGKTLVVRIA 206
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 29/112 (25%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DAKL+V +P +E+L ML + G S ++V
Sbjct: 128 DDAKLYVAYMPDHYRAEELKMLLQPYG--------------------------LPSDVRV 161
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
I +RET RSRGFGF M ++A A++ + +DG+ L V A G +P
Sbjct: 162 ITDRETGRSRGFGFAQMMDEQQAMAAIQGLNGQMLDGKTLVVRIA---GAKP 210
>gi|195429537|ref|XP_002062815.1| GK19652 [Drosophila willistoni]
gi|194158900|gb|EDW73801.1| GK19652 [Drosophila willistoni]
Length = 638
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 104/222 (46%), Gaps = 43/222 (19%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
E AKLF V N + D EKL FE G + +V
Sbjct: 177 EKAKLFTNVYVKNFTEEFDDEKLKDFFEPYGKITSYKV---------------------- 214
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERA 272
++E +S+GFGFV T E AE AV+ + D+ +G+ L V +A + + +
Sbjct: 215 -----MSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQEL 269
Query: 273 PRVFEP----------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
R FE G +YV NL +D+ RL + FS +G + +A+V+ D E GRS+G
Sbjct: 270 KRKFEELKKKRHESVFGVNLYVKNLDDSIDDERLRKEFSLYGTITSAKVMTDEE-GRSKG 328
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
FGFV S E A+ L+G+ + + + V +A+ ++ R +
Sbjct: 329 FGFVCFISPNEATCAVTELNGRVVGSKPLYVALAQRKEERKA 370
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 77/142 (54%), Gaps = 2/142 (1%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
E S+G+GFV T E A ++E + ++G+ + V K PR + + +
Sbjct: 125 EKGNSKGYGFVHFETEEAANTSIEKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTN 184
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YV N E D+ +L+ F +GK+ + +V+ +E G+S+GFGFV + A+ AL
Sbjct: 185 VYVKNFTEEFDDEKLKDFFEPYGKITSYKVM-SKEDGKSKGFGFVAFETTEAAEAAVQAL 243
Query: 342 DGQNL-DGRAIRVNVAEDRQRR 362
+G+++ +G+++ V A+ + R
Sbjct: 244 NGKDMGEGKSLYVARAQKKAER 265
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 35/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L D++ L F AG V + VC V+
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSSAGPV---------------LSIRVCR-------DVV- 38
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
T RS G+ +V +AE+A++ + +D+ + R +R P + G
Sbjct: 39 ---TRRSLGYAYVNFQQPADAERALDTMN-FDL------IRNKPIRIMWSQRDPSLRRSG 88
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL ++DN + FS G +++ +V D E G S+G+GFV +E N +I
Sbjct: 89 VGNVFIKNLDRQIDNKAIYDTFSAFGNILSCKVALD-EKGNSKGYGFVHFETEEAANTSI 147
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+G+ + V R+ R
Sbjct: 148 EKVNGMLLNGKKVYVGKFIPRKER 171
>gi|344924967|ref|ZP_08778428.1| RNA-binding region RNP-1 [Candidatus Odyssella thessalonicensis
L13]
Length = 94
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 59/80 (73%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YV NLP+ V++ L Q+F +HG VV+A+V+ D+ +GRS+GFGFV M SE + N A+
Sbjct: 4 KLYVSNLPYSVNDQTLAQLFGDHGAVVSAKVITDKMSGRSKGFGFVEMESEQQANSAMEK 63
Query: 341 LDGQNLDGRAIRVNVAEDRQ 360
L+GQ+L+GR + V +A ++
Sbjct: 64 LNGQDLNGRRMNVAIARPKE 83
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 26/113 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+V NLPY V+ + LA LF G V A +VI +
Sbjct: 4 KLYVSNLPYSVNDQTLAQLFGDHGAVVSA--------------------------KVITD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAP 273
+ + RS+GFGFV M + ++A A+E + D++GR + V A P+ ER P
Sbjct: 38 KMSGRSKGFGFVEMESEQQANSAMEKLNGQDLNGRRMNVAIARPKEEGAERRP 90
>gi|224078006|ref|XP_002190593.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Taeniopygia guttata]
Length = 629
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 12/151 (7%)
Query: 225 RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE------- 277
RS+GFGFV EEA+KAV + +I+GRLL V +A R + R FE
Sbjct: 229 RSKGFGFVNFEKHEEAQKAVADMNGKEINGRLLYVGRAQKRLERQSELKRKFEQMKQERV 288
Query: 278 ---PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
G +YV NL +D+ RL + FS +G + +A+V+ E GRS+GFGFV SS E
Sbjct: 289 NRYQGVNLYVKNLDDGIDDERLRKEFSPYGTITSAKVMT--EGGRSKGFGFVCFSSPEEA 346
Query: 335 NDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
A+ ++G+ + + + V +A+ ++ R +
Sbjct: 347 TKAVTEMNGRIVSTKPLYVALAQRKEERKAI 377
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML+EK F G M + +V
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEK--------------FSPAGPIMSI---------RVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + I GR + + + +R P + + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN L FS G +++ +VV D E G SRG+GFV + AI
Sbjct: 98 VGNVFIKNLDDSIDNKALYDTFSAFGNILSCKVVCD-ENG-SRGYGFVHFETHEAATRAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + R+ R
Sbjct: 156 ETMNGMLLNDRKVFVGHFKSRKER 179
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 278 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
PG+ +YVG+L +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 335 NDAIAALDGQNLDGRAIRV 353
A+ ++ + + GR IR+
Sbjct: 66 ERALDTMNFEVIKGRPIRI 84
>gi|348511912|ref|XP_003443487.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Oreochromis niloticus]
Length = 301
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 34/203 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
KLFVG L D D + L FE+ GT + C V+
Sbjct: 6 CKLFVGGLNVDTDDDGLRKHFEQYGT------------------LTDCV--------VVV 39
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR--GTQPERAPRVFE 277
N++ RSR FGFVT ST EEA+ A+ + +DG + V +A R +PE +V
Sbjct: 40 NKQLQRSRCFGFVTYSTPEEADAAMAA-RPHTVDGNAVEVKRAVAREDANKPEALAKV-- 96
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
+I+VG L +++ L + FS++G+V + V+ ++ETG+ RGFGFV + + A
Sbjct: 97 --KKIFVGGLKDDIEEQHLTEYFSQYGQVEKSEVISEKETGKKRGFGFVYFTDHDAADKA 154
Query: 338 IAALDGQNLDGRAIRVNVAEDRQ 360
+ + + G + V A +Q
Sbjct: 155 V-VVKFHTVKGHKVEVKKALTKQ 176
>gi|421976742|gb|AFX73254.1| glycine rich RNA binding protein 1a [Solanum lycopersicum]
Length = 164
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+ +VG L W + L FS +G+VV+++++ DRETGRSRGFGFVT E + DAI+
Sbjct: 7 YSCFVGGLAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIS 66
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ LDGR I VN A+
Sbjct: 67 GMNGQELDGRNITVNEAQ 84
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
++I +RET RSRGFGFVT + + A+ + ++DGR +TVN+A
Sbjct: 37 KIINDRETGRSRGFGFVTFKDEKSMKDAISGMNGQELDGRNITVNEA 83
>gi|388512303|gb|AFK44213.1| unknown [Medicago truncatula]
Length = 121
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G L + VD+ L F+ +G VV ARV+ DRETGRSRGFGF+ +SE A+ +
Sbjct: 12 KLFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFINFTSEESATSAL-S 70
Query: 341 LDGQNLDGRAIRVNVAEDRQ 360
+DGQ+L+GR IRV+ A DRQ
Sbjct: 71 MDGQDLNGRNIRVSYANDRQ 90
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 27/113 (23%)
Query: 153 FVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYV 212
++ +KLF+G L Y+VD + L F G V A
Sbjct: 4 YLRHMSSSKLFIGGLSYNVDDQSLRDAFTTYGDVVEA----------------------- 40
Query: 213 SLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+VI +RET RSRGFGF+ ++ E A A+ M + D++GR + V+ A R
Sbjct: 41 ---RVITDRETGRSRGFGFINFTSEESATSALSMDGQ-DLNGRNIRVSYANDR 89
>gi|449486950|ref|XP_004157451.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 163
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 58/84 (69%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
F G +++VG L + D+ L FS++G+VV ARVV D +TGR +GFGFVT S++ E +
Sbjct: 66 FVSGSKVFVGGLSYNSDDLTLRVAFSKYGEVVEARVVMDPDTGRCKGFGFVTFSAKEEAS 125
Query: 336 DAIAALDGQNLDGRAIRVNVAEDR 359
AI ALDG++L GR IR N A ++
Sbjct: 126 SAIKALDGKDLGGRRIRCNYAVEK 149
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 29/119 (24%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
+F FV +K+FVG L Y+ D L + F K G E+ E +
Sbjct: 60 IFRTLRFVS---GSKVFVGGLSYNSDDLTLRVAFSKYG--EVVEAR-------------- 100
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
V+ + +T R +GFGFVT S EEA A++ D+ GR + N A +
Sbjct: 101 ----------VVMDPDTGRCKGFGFVTFSAKEEASSAIKALDGKDLGGRRIRCNYAVEK 149
>gi|115445085|ref|NP_001046322.1| Os02g0221500 [Oryza sativa Japonica Group]
gi|46806500|dbj|BAD17624.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806519|dbj|BAD17632.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|113535853|dbj|BAF08236.1| Os02g0221500 [Oryza sativa Japonica Group]
Length = 397
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 33/202 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
K+FVG + ++ E + FEK G + + ++
Sbjct: 66 GKIFVGGVAWETTEESFSKHFEKYGAITDS--------------------------VIMK 99
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEP 278
++ T RGFGFVT S +K +E H IDGR + V + PR + P+
Sbjct: 100 DKHTKMPRGFGFVTFSDPSVIDKVLEDEHV--IDGRTVEVKRTVPREEMSSKDGPKTR-- 155
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+I+VG LP + L + FS +GK+V +++ D TGRSRGFGFVT SE + I
Sbjct: 156 --KIFVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVI 213
Query: 339 AALDGQNLDGRAIRVNVAEDRQ 360
+ ++L G+ + + AE ++
Sbjct: 214 SEGRMRDLGGKQVEIKKAEPKK 235
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 271 RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
RAP G +I+VG + WE + F ++G + ++ ++ D+ T RGFGFVT S
Sbjct: 58 RAPGGDSSG-KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSD 116
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
+ ++ + D +DGR + V R+ SS
Sbjct: 117 PSVIDKVLE--DEHVIDGRTVEVKRTVPREEMSS 148
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 26/117 (22%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCA 208
EE + P+ K+FVG LP + ++L F G +I E
Sbjct: 144 EEMSSKDGPKTRKIFVGGLPSSLTEDELREHFSPYG--KIVE------------------ 183
Query: 209 VFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
Q++ + T RSRGFGFVT + + E+ + D+ G+ + + KA P+
Sbjct: 184 ------HQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 234
>gi|297802026|ref|XP_002868897.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
gi|297314733|gb|EFH45156.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
Length = 164
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 55/81 (67%)
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
E +R +VG L W + LE+ FS+ G V++++++ DRETGRSRGFGFVT E + D
Sbjct: 3 EVEYRCFVGGLAWATQDHDLERTFSQFGDVLDSKIINDRETGRSRGFGFVTFKDEKAMRD 62
Query: 337 AIAALDGQNLDGRAIRVNVAE 357
AI ++G+ LDGR I VN A+
Sbjct: 63 AIEEMNGKELDGRTITVNEAQ 83
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
++I +RET RSRGFGFVT + A+E + ++DGR +TVN+A
Sbjct: 36 KIINDRETGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRTITVNEA 82
>gi|149392537|gb|ABR26071.1| chloroplast ribonucleoprotein a precursor [Oryza sativa Indica
Group]
Length = 65
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/63 (65%), Positives = 51/63 (80%)
Query: 300 FSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
FSE G V++A+V+YDRE+GRSRGFGFVT S E+N+AI+ LDG +LDGR IRV VAE +
Sbjct: 1 FSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAESK 60
Query: 360 QRR 362
RR
Sbjct: 61 PRR 63
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL--TVNKAAPR 265
+VIY+RE+ RSRGFGFVT + EE A+ D+DGR + TV ++ PR
Sbjct: 11 KVIYDRESGRSRGFGFVTYGSAEEVNNAISNLDGVDLDGRQIRVTVAESKPR 62
>gi|347819854|ref|ZP_08873288.1| RNP-1 like RNA-binding protein [Verminephrobacter aporrectodeae
subsp. tuberculatae At4]
Length = 168
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 57/84 (67%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + LEQ F + G V +A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR+I VN A + R
Sbjct: 62 TGMNGQPLGGRSIVVNEARPMEPR 85
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 26/112 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 4 KLYVGNLPYSVRDGDLEQAFGQFGAVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 272
R+T RS+GFGFV M + EA+ A+ + + GR + VN+A P +P R+
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAITGMNGQPLGGRSIVVNEARPMEPRPPRS 89
>gi|307153774|ref|YP_003889158.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
gi|306984002|gb|ADN15883.1| RNP-1 like RNA-binding protein [Cyanothece sp. PCC 7822]
Length = 102
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 58/84 (69%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNLP+EV+ L +VF+E+GKV + DR+TGR RGFGFV M + + + AI AL
Sbjct: 3 IYVGNLPFEVEEDNLNEVFAEYGKVKRVYMPVDRDTGRRRGFGFVEMETSAQEDSAITAL 62
Query: 342 DGQNLDGRAIRVNVAEDRQRRSSF 365
DG G+ ++VN A +R+ RSS+
Sbjct: 63 DGAEWMGKQLKVNKARERENRSSY 86
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNLP++V+ + L +F + G V + +M V +R
Sbjct: 3 IYVGNLPFEVEEDNLNEVFAEYGKV-------------KRVYMPV-------------DR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+T R RGFGFV M T + + A+ + G+ L VNKA R
Sbjct: 37 DTGRRRGFGFVEMETSAQEDSAITALDGAEWMGKQLKVNKARER 80
>gi|195150897|ref|XP_002016387.1| GL11548 [Drosophila persimilis]
gi|194110234|gb|EDW32277.1| GL11548 [Drosophila persimilis]
Length = 640
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 43/222 (19%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
E AKLF V N D D EKL FE G + +V
Sbjct: 177 EKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKV---------------------- 214
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERA 272
++E +S+GFGFV T E AE AV+ + D+ + + L V +A + + +
Sbjct: 215 -----MSKEDGKSKGFGFVAYETTEAAEAAVQALNGKDMGESKSLYVARAQKKAERQQEL 269
Query: 273 PRVFEP----------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
R FE G +YV NL +D+ RL + FS +G + +A+V+ D E GRS+G
Sbjct: 270 KRKFEELKKKRHDSVFGVNLYVKNLDDTIDDERLRKDFSMYGTITSAKVMTDEE-GRSKG 328
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
FGFV S E A+ L+G+ + + + V +A+ ++ R +
Sbjct: 329 FGFVCFISPNEATCAVTELNGRVIGSKPLYVALAQRKEERKA 370
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 77/142 (54%), Gaps = 2/142 (1%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
E S+G+GFV T E A +++ + ++G+ + V K PR + + +
Sbjct: 125 EKGNSKGYGFVHFETEEAANTSIDRVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTN 184
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YV N + D+ +L++ F +GK+ + +V+ +E G+S+GFGFV + A+ AL
Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAYETTEAAEAAVQAL 243
Query: 342 DGQNL-DGRAIRVNVAEDRQRR 362
+G+++ + +++ V A+ + R
Sbjct: 244 NGKDMGESKSLYVARAQKKAER 265
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 35/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L D++ L F AG V + VC VI
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSTAGPV---------------LSIRVCR-------DVI- 38
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
T RS G+ +V +AE+A++ + +D+ + R +R P + G
Sbjct: 39 ---TRRSLGYAYVNFQQPADAERALDTMN-FDL------IRNKPIRIMWSQRDPSLRRSG 88
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN + FS G +++ +V D E G S+G+GFV +E N +I
Sbjct: 89 VGNVFIKNLDKGIDNKAIYDTFSAFGNILSCKVAID-EKGNSKGYGFVHFETEEAANTSI 147
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+G+ + V R+ R
Sbjct: 148 DRVNGMLLNGKKVYVGKFIPRKER 171
>gi|125808454|ref|XP_001360757.1| GA18673 [Drosophila pseudoobscura pseudoobscura]
gi|54635929|gb|EAL25332.1| GA18673 [Drosophila pseudoobscura pseudoobscura]
Length = 640
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 43/222 (19%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
E AKLF V N D D EKL FE G + +V
Sbjct: 177 EKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKV---------------------- 214
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERA 272
++E +S+GFGFV T E AE AV+ + D+ + + L V +A + + +
Sbjct: 215 -----MSKEDGKSKGFGFVAYETTEAAEAAVQALNGKDMGESKSLYVARAQKKAERQQEL 269
Query: 273 PRVFEP----------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
R FE G +YV NL +D+ RL + FS +G + +A+V+ D E GRS+G
Sbjct: 270 KRKFEELKKKRHDSVFGVNLYVKNLDDTIDDERLRKDFSMYGTITSAKVMTDEE-GRSKG 328
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
FGFV S E A+ L+G+ + + + V +A+ ++ R +
Sbjct: 329 FGFVCFISPNEATCAVTELNGRVIGSKPLYVALAQRKEERKA 370
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 77/142 (54%), Gaps = 2/142 (1%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
E S+G+GFV T E A +++ + ++G+ + V K PR + + +
Sbjct: 125 EKGNSKGYGFVHFETEEAANMSIDRVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTN 184
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YV N + D+ +L++ F +GK+ + +V+ +E G+S+GFGFV + A+ AL
Sbjct: 185 VYVKNFTEDFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAYETTEAAEAAVQAL 243
Query: 342 DGQNL-DGRAIRVNVAEDRQRR 362
+G+++ + +++ V A+ + R
Sbjct: 244 NGKDMGESKSLYVARAQKKAER 265
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 35/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L D++ L F AG V + VC VI
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSTAGPV---------------LSIRVCR-------DVI- 38
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
T RS G+ +V +AE+A++ + +D+ + R +R P + G
Sbjct: 39 ---TRRSLGYAYVNFQQPADAERALDTMN-FDL------IRNKPIRIMWSQRDPSLRRSG 88
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN + FS G +++ +V D E G S+G+GFV +E N +I
Sbjct: 89 VGNVFIKNLDKGIDNKAIYDTFSAFGNILSCKVAID-EKGNSKGYGFVHFETEEAANMSI 147
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+G+ + V R+ R
Sbjct: 148 DRVNGMLLNGKKVYVGKFIPRKER 171
>gi|449439327|ref|XP_004137437.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Cucumis sativus]
Length = 168
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 59/87 (67%)
Query: 276 FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
F G +++VG L + D+ L FS++G+VV ARVV D +TGR +GFGFVT S++ E +
Sbjct: 66 FVSGSKVFVGGLSYNSDDLTLRVAFSKYGEVVEARVVMDPDTGRCKGFGFVTFSAKEEAS 125
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRR 362
AI ALDG++L GR IR N A ++ R
Sbjct: 126 SAIKALDGKDLGGRRIRCNYAVEKVAR 152
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 29/119 (24%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
+F FV +K+FVG L Y+ D L + F K G E+ E +
Sbjct: 60 IFRTLRFVS---GSKVFVGGLSYNSDDLTLRVAFSKYG--EVVEAR-------------- 100
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
V+ + +T R +GFGFVT S EEA A++ D+ GR + N A +
Sbjct: 101 ----------VVMDPDTGRCKGFGFVTFSAKEEASSAIKALDGKDLGGRRIRCNYAVEK 149
>gi|356572088|ref|XP_003554202.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Glycine max]
Length = 336
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 30/207 (14%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P KLFV L ++ SE L F++ G +E
Sbjct: 63 PAHRKLFVRGLAWNTTSETLRAAFQEHGEIEEG--------------------------A 96
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
VI+++ T +SRG+GF+T +E ++A+ + IDGRL N A + AP +
Sbjct: 97 VIFDKVTGKSRGYGFITFKNMESTQQALRAPSKL-IDGRLAVCNLACESLSGTSSAPDLS 155
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
++Y+G+L EV + L F+ HG++ V YDR+T SRGFGFVT +
Sbjct: 156 L--RKLYIGSLSPEVTSEILLNYFARHGEIEEGSVAYDRDTNESRGFGFVTYKTAEAAKK 213
Query: 337 AIAALDGQNLDGRAIRVNVAEDRQRRS 363
AI ++ + L GR I V A+ + ++
Sbjct: 214 AIDDVE-KMLGGRNIVVKYADSHKGKT 239
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 55/131 (41%), Gaps = 39/131 (29%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL++G+L +V SE L F + G +E V Y+
Sbjct: 158 KLYIGSLSPEVTSEILLNYFARHGEIEEGSVA--------------------------YD 191
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA-----------PRGTQP 269
R+T+ SRGFGFVT T E A+KA++ + + GR + V A P G P
Sbjct: 192 RDTNESRGFGFVTYKTAEAAKKAIDDVEKM-LGGRNIVVKYADSHKGKTGQPPFPSGVVP 250
Query: 270 ERAPRVFEPGF 280
AP PG+
Sbjct: 251 -MAPLPMNPGY 260
>gi|242082447|ref|XP_002445992.1| hypothetical protein SORBIDRAFT_07g029220 [Sorghum bicolor]
gi|241942342|gb|EES15487.1| hypothetical protein SORBIDRAFT_07g029220 [Sorghum bicolor]
Length = 266
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 30/206 (14%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+L N+P+D ++++ LF+ G+V E+ +
Sbjct: 73 RLVAQNIPWDSTADEMRALFQTHGSVVGVELSMY-------------------------- 106
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP-- 278
++RG FVTM + E+A A+ + ++ R + V+ A PR QP++ V P
Sbjct: 107 -SASKNRGLAFVTMGSEEDALAALTHLNSTILNDRKIKVDFARPRKKQPKQPVVVSNPME 165
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG-RSRGFGFVTMSSETELNDA 337
+ ++VGNL W V N L ++F+ V++A V++ T RS G+ FV+ SS+ A
Sbjct: 166 KYIVFVGNLTWRVRNRHLRELFASAPGVISAEVIFHTTTPRRSAGYAFVSFSSKETAEAA 225
Query: 338 IAALDGQNLDGRAIRVNVAEDRQRRS 363
I+A +G+ L GR I V + ++ +++
Sbjct: 226 ISAFNGKILMGRPINVMLKDENGKKN 251
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARV-VYDRETGRSRGFGFVTMSSETELND 336
P R+ N+PW+ + +F HG VV + +Y ++RG FVTM SE +
Sbjct: 70 PRTRLVAQNIPWDSTADEMRALFQTHGSVVGVELSMYS--ASKNRGLAFVTMGSEEDALA 127
Query: 337 AIAALDGQNLDGRAIRVNVAEDRQRR 362
A+ L+ L+ R I+V+ A R+++
Sbjct: 128 ALTHLNSTILNDRKIKVDFARPRKKQ 153
>gi|30692256|ref|NP_849524.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661646|gb|AEE87046.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 92
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 56/80 (70%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W ++ L++ FS+ G V++++++ DRE+GRSRGFGFVT E + DAI
Sbjct: 6 YRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIE 65
Query: 340 ALDGQNLDGRAIRVNVAEDR 359
++G+ LDGR I VN A+ R
Sbjct: 66 EMNGKELDGRVITVNEAQSR 85
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 26/107 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + + E L F + G V + ++I +
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDS--------------------------KIIND 40
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT 267
RE+ RSRGFGFVT + A+E + ++DGR++TVN+A RG+
Sbjct: 41 RESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQSRGS 87
>gi|388854914|emb|CCF51417.1| probable PAB1-mRNA polyadenylate-binding protein [Ustilago hordei]
Length = 648
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 31/223 (13%)
Query: 159 DAKLFVGN-LP-------YDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
D K++VG+ +P + K ++ K E+ + +F LF N
Sbjct: 199 DKKVYVGHHIPRKERQAKIEESRAKFTNVYCKNVDPEVTDEQFEKLFTN----------- 247
Query: 211 YVSLLQVIYNRETD-RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
Y + + R+ D +S+GFGFV EEA+KAV+ H D G+ L V +A + +
Sbjct: 248 YGKITSCVLQRDDDGKSKGFGFVNFEDHEEAQKAVDELHDSDFHGQKLFVARAQKKSERE 307
Query: 270 ERAPRVFEP----------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGR 319
E R +E G +Y+ N+P D+ RL + F+ G + + +++ +G
Sbjct: 308 EELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLREEFAPFGTITSCKIM-RAPSGV 366
Query: 320 SRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
SRGFGFV S E N A++ ++G+ LD R + V +A+ + R
Sbjct: 367 SRGFGFVCYSVPEEANKAVSEMNGKMLDNRPLYVALAQRKDVR 409
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 7/140 (5%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR---I 282
S G+GFV T E AE A++ + ++ + + V PR ER ++ E + +
Sbjct: 171 SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRK---ERQAKIEESRAKFTNV 227
Query: 283 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 342
Y N+ EV + + E++F+ +GK+ + + D + G+S+GFGFV E A+ L
Sbjct: 228 YCKNVDPEVTDEQFEKLFTNYGKITSCVLQRD-DDGKSKGFGFVNFEDHEEAQKAVDELH 286
Query: 343 GQNLDGRAIRVNVAEDRQRR 362
+ G+ + V A+ + R
Sbjct: 287 DSDFHGQKLFVARAQKKSER 306
>gi|354484923|ref|XP_003504635.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 672
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 41/215 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NL D+D + L LF + G ++ +V R
Sbjct: 256 VYVKNLHMDMDEQGLQDLFSQFGKMQSVKVM----------------------------R 287
Query: 222 ETD-RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE--- 277
+++ +SRGFGFV EEA+KAV+ + ++ G+LL V +A R + R FE
Sbjct: 288 DSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVRGQLLYVGRAQKRAERQSELKRRFEQVK 347
Query: 278 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +YV NL +++ RL++VFS +G + +A+V+ E+ S+GFGFV SS
Sbjct: 348 QERQNRYQGVNLYVKNLDDSINDERLKEVFSAYGVITSAKVM--TESSHSKGFGFVCFSS 405
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 406 PEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 440
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+ L+VG+L DV L +F GT+ + VC
Sbjct: 74 SSLYVGDLHPDVTEAMLYEMFSPIGTI---------------LSIRVCR----------- 107
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + I G+ + + + R P + + G
Sbjct: 108 DVATRRSLGYAYINFQQPADAERALDTMNFEMIKGQPIRIMWS-------HRDPGLRKSG 160
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++++VVY+ E G SRGFGFV + AI
Sbjct: 161 MGNIFIKNLENSIDNKALYDTFSTFGSILSSKVVYN-EHG-SRGFGFVHFETHEAAQKAI 218
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + RQ+R
Sbjct: 219 NTMNGMLLNDRKVFVGHFKSRQKR 242
>gi|170060137|ref|XP_001865670.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
gi|167878677|gb|EDS42060.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
Length = 402
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 95/206 (46%), Gaps = 39/206 (18%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E KLFVG L ++ E L F + G V + V V
Sbjct: 17 EKGKLFVGGLSWETTQENLQRYFGRYGEV-------------------IDCV-------V 50
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT-QPERA---P 273
+ N ET RSRGFGFVT + E E+A+E + +DGR + PR +P+R P
Sbjct: 51 MKNNETGRSRGFGFVTFADPENVERALEN-GPHTLDGRTIDPKPCNPRSLHKPKRTGGYP 109
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
+VF +G LP + L FS +G V+ ++YD+E +SRGFGF++ +E
Sbjct: 110 KVF-------LGGLPPNITETDLRSFFSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEAA 162
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDR 359
+ A A N+ G+ + + AE R
Sbjct: 163 VERATAEHF-VNISGKQVEIKKAEPR 187
>gi|375103924|ref|ZP_09750185.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374664655|gb|EHR69440.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 129
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 58/84 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNL + V +A L+Q F+E G V +A+V+ DR++GRS+GFGFV M S E AI
Sbjct: 2 GNKLYVGNLAYSVTDASLQQQFAECGTVTSAKVMMDRDSGRSKGFGFVEMGSHEEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
L G ++DGRA+ VN A R+ R
Sbjct: 62 RKLHGASVDGRALVVNEARPREER 85
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 53/109 (48%), Gaps = 26/109 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL Y V L F + GTV A +V+ +
Sbjct: 4 KLYVGNLAYSVTDASLQQQFAECGTVTSA--------------------------KVMMD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
R++ RS+GFGFV M + EEA+ A+ H +DGR L VN+A PR +P
Sbjct: 38 RDSGRSKGFGFVEMGSHEEAQAAIRKLHGASVDGRALVVNEARPREERP 86
>gi|388494768|gb|AFK35450.1| unknown [Medicago truncatula]
Length = 176
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 57/81 (70%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G + + D L + FS +G V++A+++ DR+TGRSRGFGF+T ++ E + A+ A
Sbjct: 41 KLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFGFITFATSEEASSALQA 100
Query: 341 LDGQNLDGRAIRVNVAEDRQR 361
+D + LDGR +RVN A +R R
Sbjct: 101 MDNKELDGRTVRVNYATERAR 121
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 50/112 (44%), Gaps = 26/112 (23%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
+ AKLF+G + Y D L F + G V A
Sbjct: 34 IRSMSSAKLFIGGVSYSTDETGLREAFSRYGDVLDA------------------------ 69
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
++I +R+T RSRGFGF+T +T EEA A++ ++DGR + VN A R
Sbjct: 70 --KIIMDRDTGRSRGFGFITFATSEEASSALQAMDNKELDGRTVRVNYATER 119
>gi|469070|dbj|BAA03741.1| RNA-binding glycine-rich protein-1a [Nicotiana sylvestris]
gi|295393563|gb|ADG03637.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 156
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 55/78 (70%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W + L + FS+ G++++++++ DRETGRSRGFGFVT E + DAI
Sbjct: 6 YRCFVGGLAWATTDQTLGEAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIE 65
Query: 340 ALDGQNLDGRAIRVNVAE 357
++GQ+LDGR I VN A+
Sbjct: 66 GMNGQDLDGRNITVNEAQ 83
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
++I +RET RSRGFGFVT + A+E + D+DGR +TVN+A
Sbjct: 36 KIINDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDLDGRNITVNEA 82
>gi|121705054|ref|XP_001270790.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
gi|119398936|gb|EAW09364.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
Length = 514
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 106/215 (49%), Gaps = 41/215 (19%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF+GNL ++VD + L FE FG +S ++++
Sbjct: 260 ANLFIGNLSWNVDEDWLRQEFE--------------TFGE------------LSGVRIVT 293
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR--------GTQPER 271
+R++ RSRGFG+V + +A KA + ++DGR + ++ A R G Q
Sbjct: 294 DRDSGRSRGFGYVEYVSAADAAKAYKAKKDTELDGRKINLDYATGRPANNQQGGGFQDRA 353
Query: 272 APRVFEPGFR-------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFG 324
R G + ++VGNLP+ + ++++F E G +V R+ D ++GR +GFG
Sbjct: 354 QARARSFGDQSSPESDTLFVGNLPFSANEDSVQELFGEKGSIVGIRLPTDPDSGRPKGFG 413
Query: 325 FVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
+V +S E +A +L+G LDGR +R++ + R
Sbjct: 414 YVQFASVDEAREAFNSLNGAELDGRPVRLDFSTPR 448
>gi|376316225|emb|CCF99622.1| RNA recognition motif-containing protein [uncultured Flavobacteriia
bacterium]
Length = 83
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 57/81 (70%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
I+VGNL W VD+ L + F G V +ARV+ DRETGRSRGFGFV M ++ E A+ +
Sbjct: 3 IFVGNLAWGVDDVVLREAFEAFGAVDSARVITDRETGRSRGFGFVEMPNQEEAQAALDGM 62
Query: 342 DGQNLDGRAIRVNVAEDRQRR 362
+G++L+GR IR N ++ R+RR
Sbjct: 63 EGKDLEGRPIRCNESQPRERR 83
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 50/104 (48%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FVGNL + VD L FE G V+ A +VI +R
Sbjct: 3 IFVGNLAWGVDDVVLREAFEAFGAVDSA--------------------------RVITDR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET RSRGFGFV M EEA+ A++ D++GR + N++ PR
Sbjct: 37 ETGRSRGFGFVEMPNQEEAQAALDGMEGKDLEGRPIRCNESQPR 80
>gi|260825257|ref|XP_002607583.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
gi|229292931|gb|EEN63593.1| hypothetical protein BRAFLDRAFT_71461 [Branchiostoma floridae]
Length = 183
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
EPG +++VG L W+ + LE FSE+G++ + +V+ DRETGRSRGFGFVT +++++ +
Sbjct: 6 EPG-KLFVGGLSWDTTSEGLESTFSEYGEITDCKVITDRETGRSRGFGFVTFANDSDAAN 64
Query: 337 AIAALDGQNLDGRAIRVNVAEDR 359
A +DG LD R IRV+ A +
Sbjct: 65 AKKCMDGTELDSRQIRVDYASKK 87
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
E KLFVG L +D SE L F + G EI + K
Sbjct: 5 KEPGKLFVGGLSWDTTSEGLESTFSEYG--EITDCK------------------------ 38
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
VI +RET RSRGFGFVT + +A A + ++D R + V+ A+ +
Sbjct: 39 VITDRETGRSRGFGFVTFANDSDAANAKKCMDGTELDSRQIRVDYASKK 87
>gi|120610816|ref|YP_970494.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120589280|gb|ABM32720.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 116
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 57/80 (71%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+IYVGNLP+ V + L F+E G V +++++ DRETGRS+GFGFV MSS + AI
Sbjct: 4 KIYVGNLPYSVTDESLRSNFAEFGGVTSSKIMTDRETGRSKGFGFVEMSSAEDAQSAITG 63
Query: 341 LDGQNLDGRAIRVNVAEDRQ 360
L+G ++DGR+I VN+A R+
Sbjct: 64 LNGLSVDGRSIVVNLARPRE 83
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 28/119 (23%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
K++VGNLPY V E L F + G V + +++
Sbjct: 3 CKIYVGNLPYSVTDESLRSNFAEFGGVTSS--------------------------KIMT 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP 278
+RET RS+GFGFV MS+ E+A+ A+ + +DGR + VN A PR + P + P
Sbjct: 37 DRETGRSKGFGFVEMSSAEDAQSAITGLNGLSVDGRSIVVNLARPR--EANGGPGGYSP 93
>gi|221069836|ref|ZP_03545941.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
gi|220714859|gb|EED70227.1| RNP-1 like RNA-binding protein [Comamonas testosteroni KF-1]
Length = 158
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 58/84 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + LEQ F + G V +ARV+ +R+TGRS+GFGFV M+SE E AI
Sbjct: 2 GNKLYVGNLPYGVRDNDLEQAFGQFGAVASARVMMERDTGRSKGFGFVEMASEAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR++ VN A + R
Sbjct: 62 QGMNGQPLGGRSLVVNEARPMEPR 85
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 26/111 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 4 KLYVGNLPYGVRDNDLEQAFGQFGAVASA--------------------------RVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
R+T RS+GFGFV M++ EA+ A++ + + GR L VN+A P +P R
Sbjct: 38 RDTGRSKGFGFVEMASEAEAQAAIQGMNGQPLGGRSLVVNEARPMEPRPPR 88
>gi|346971381|gb|EGY14833.1| nucleolar protein [Verticillium dahliae VdLs.17]
Length = 785
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 47/218 (21%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFV +LP D SE LA F + H F V V+ ++
Sbjct: 40 LFVRSLPPDATSESLADYFSQ-----------H---------------FPVKHATVVVDQ 73
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV----------NKAAPRGTQ--- 268
T SRGFGFVT++ E+A +A + +GR +TV N +APR
Sbjct: 74 ATKESRGFGFVTLTDAEDALEAKAKLNNELWEGRRITVDLAEARNRDQNSSAPRTATLAP 133
Query: 269 --PERAPRVFEPGF---RIYVGNLPWEVDN-ARLEQVFSEHGKVVNARVVYDRETGRSRG 322
++ + E + ++ + NLPW + A+L+ +F +GK+ A + + GR RG
Sbjct: 134 VGKQKKSQAIEEAWVSPKLIIRNLPWSIKTPAQLQALFQSYGKIKFADLPMN--NGRLRG 191
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
FGFVT+ E +AI A++G+ +DGR I V+ A +++
Sbjct: 192 FGFVTIRGEKNAENAIKAMNGKGIDGRTIAVDWAVEKE 229
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%)
Query: 258 TVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRET 317
T N A QP+ E ++V +LP + + L FS+H V +A VV D+ T
Sbjct: 16 TANHHADGAPQPKPKKAKVEANRSLFVRSLPPDATSESLADYFSQHFPVKHATVVVDQAT 75
Query: 318 GRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
SRGFGFVT++ + +A A L+ + +GR I V++AE R R
Sbjct: 76 KESRGFGFVTLTDAEDALEAKAKLNNELWEGRRITVDLAEARNR 119
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 268 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
QPE A + +++ NLP+ + +L+ F+ G V ARVV DR T R G GFV
Sbjct: 343 QPETAKKTTNNDSTVFIRNLPFTTTDEQLKSHFAVFGPVRYARVVMDRATDRPAGTGFVC 402
>gi|241766569|ref|ZP_04764426.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
gi|241363173|gb|EER58764.1| RNP-1 like RNA-binding protein [Acidovorax delafieldii 2AN]
Length = 116
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 58/84 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V ++ LEQ F + G V +A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR+I VN A + R
Sbjct: 62 NGMNGQPLGGRSIVVNEARPMEPR 85
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 4 KLYVGNLPYSVRDSDLEQAFGQFGAVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
R+T RS+GFGFV M + EA+ A+ + + GR + VN+A P +P
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSIVVNEARPMEPRP 86
>gi|195381687|ref|XP_002049579.1| GJ21671 [Drosophila virilis]
gi|194144376|gb|EDW60772.1| GJ21671 [Drosophila virilis]
Length = 645
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 105/225 (46%), Gaps = 43/225 (19%)
Query: 155 EPPEDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
E E AKLF V N + D EKL FE G + +V
Sbjct: 174 ELGEKAKLFTNVYVKNFTEEFDDEKLKEFFEPYGKITSYKV------------------- 214
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI-DGRLLTVNKAAPRGTQP 269
++E +S+GFGFV T E AE AV+ + D+ +G+ L V +A + +
Sbjct: 215 --------MSKEDGKSKGFGFVAYETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQ 266
Query: 270 ERAPRVFEP----------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGR 319
+ R FE G +YV NL +D+ RL + FS +G + +A+V+ D E GR
Sbjct: 267 QELKRKFEELKKKRHESVFGVNLYVKNLDDSIDDERLRKEFSLYGTITSAKVMTDDE-GR 325
Query: 320 SRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
S+GFGFV S E A+ L+G+ + + + V +A+ ++ R +
Sbjct: 326 SKGFGFVCFISPNEATCAVTELNGRVVGSKPLYVALAQRKEERKA 370
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
E S+G+GFV T E A +++ + ++G+ + V K PR + + +
Sbjct: 125 EKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTN 184
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YV N E D+ +L++ F +GK+ + +V+ +E G+S+GFGFV + A+ AL
Sbjct: 185 VYVKNFTEEFDDEKLKEFFEPYGKITSYKVM-SKEDGKSKGFGFVAYETTEAAEAAVQAL 243
Query: 342 DGQNL-DGRAIRVNVAEDRQRR 362
+G+++ +G+++ V A+ + R
Sbjct: 244 NGKDMGEGKSLYVARAQKKAER 265
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 35/195 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L D++ L F AG V + VC V+
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSTAGPV---------------LSIRVCR-------DVV- 38
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
T RS G+ +V +AE+A++ + +D+ + R +R P + G
Sbjct: 39 ---TRRSLGYAYVNFQQPADAERALDTMN-FDL------IRNKPIRIMWSQRDPSLRRSG 88
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN + FS G +++ +V D E G S+G+GFV +E N +I
Sbjct: 89 VGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATD-EKGNSKGYGFVHFETEEAANTSI 147
Query: 339 AALDGQNLDGRAIRV 353
++G L+G+ + V
Sbjct: 148 DKVNGMLLNGKKVYV 162
>gi|158516903|gb|ABW70168.1| putative glycine-rich RNA-binding protein 2 [Bambusa oldhamii]
Length = 162
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 65/100 (65%), Gaps = 4/100 (4%)
Query: 262 AAPRGTQPE--RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGR 319
+A G+ P A R+ +++VG L W D+ L+ F+ G+VV ARV+ DR+TG+
Sbjct: 19 SASTGSTPAMFNAARLMST--KLFVGGLSWGTDDQSLKDAFTSFGEVVEARVITDRDTGK 76
Query: 320 SRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
SRGFGFV+ S+ + +A++++DGQ L+GR I VN A +R
Sbjct: 77 SRGFGFVSFSNGDDAKNAMSSMDGQELEGRNIHVNFANER 116
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG L + D + L F G E+ E + VI +
Sbjct: 38 KLFVGGLSWGTDDQSLKDAFTSFG--EVVEAR------------------------VITD 71
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
R+T +SRGFGFV+ S ++A+ A+ +++GR + VN A R
Sbjct: 72 RDTGKSRGFGFVSFSNGDDAKNAMSSMDGQELEGRNIHVNFANER 116
>gi|53804863|ref|YP_113486.1| RNA-binding protein [Methylococcus capsulatus str. Bath]
gi|53758624|gb|AAU92915.1| RNA-binding protein [Methylococcus capsulatus str. Bath]
Length = 95
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 56/78 (71%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNL + V +A LE+ F+ +G V +A+VV DR TGRSRGFGFV M S+ E AI
Sbjct: 2 GSKLYVGNLNYRVGDADLERTFAAYGTVKSAQVVMDRATGRSRGFGFVEMGSDQEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVA 356
A L+G+ +DGR + VN A
Sbjct: 62 AGLNGKEMDGRNLMVNEA 79
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 51/105 (48%), Gaps = 26/105 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KL+VGNL Y V L F GTV+ A QV+
Sbjct: 3 SKLYVGNLNYRVGDADLERTFAAYGTVKSA--------------------------QVVM 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP 264
+R T RSRGFGFV M + +EA+ A+ + ++DGR L VN+A P
Sbjct: 37 DRATGRSRGFGFVEMGSDQEAQAAIAGLNGKEMDGRNLMVNEARP 81
>gi|50555934|ref|XP_505375.1| YALI0F13475p [Yarrowia lipolytica]
gi|49651245|emb|CAG78182.1| YALI0F13475p [Yarrowia lipolytica CLIB122]
Length = 422
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 36/202 (17%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FVG L ++VD + L F AG V +VI +
Sbjct: 170 VFVGGLSWNVDDDWLTKEFADAGAVSA---------------------------RVITEK 202
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR------- 274
T RS+GFG+V ++ +A+K VE F +IDGR + ++ + PE+ R
Sbjct: 203 ATGRSKGFGYVDFASGADAQKCVEEFQDKEIDGRTVRLDISTNVRQTPEQKQRDRSSQYG 262
Query: 275 --VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
+ EP ++VGNL ++ + L +F E+G VV+ R+ ET + +GFG+V S
Sbjct: 263 DQLSEPADTLFVGNLSFDTNRDDLFGIFGEYGSVVSIRLPTHPETEQPKGFGYVQFGSVD 322
Query: 333 ELNDAIAALDGQNLDGRAIRVN 354
E A+ L G GR+ R++
Sbjct: 323 EAKAALEGLSGYEYLGRSFRLD 344
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++VG L W VD+ L + F++ G V+ARV+ ++ TGRS+GFG+V +S + +
Sbjct: 170 VFVGGLSWNVDDDWLTKEFADAG-AVSARVITEKATGRSKGFGYVDFASGADAQKCVEEF 228
Query: 342 DGQNLDGRAIRVNVA-------EDRQR-RSS 364
+ +DGR +R++++ E +QR RSS
Sbjct: 229 QDKEIDGRTVRLDISTNVRQTPEQKQRDRSS 259
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 27/109 (24%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P D LFVGNL +D + + L +F + G+V + H
Sbjct: 268 PADT-LFVGNLSFDTNRDDLFGIFGEYGSVVSIRLPTH---------------------- 304
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET++ +GFG+V +V+EA+ A+E Y+ GR ++ +P+
Sbjct: 305 ----PETEQPKGFGYVQFGSVDEAKAALEGLSGYEYLGRSFRLDYTSPK 349
>gi|121607153|ref|YP_994960.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae EF01-2]
gi|121551793|gb|ABM55942.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae EF01-2]
Length = 175
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 57/84 (67%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + LEQ F + G V +A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLPYSVRDGDLEQAFGQFGAVASAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR+I VN A + R
Sbjct: 62 NGMNGQPLGGRSIVVNEARPMEPR 85
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 4 KLYVGNLPYSVRDGDLEQAFGQFGAVASA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
R+T RS+GFGFV M + EA+ A+ + + GR + VN+A P +P
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSIVVNEARPMEPRP 86
>gi|392346932|ref|XP_230831.6| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Rattus
norvegicus]
Length = 609
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 41/215 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NL D+D + L LF + G + +V R
Sbjct: 193 IYVKNLRVDMDEQGLQDLFSQFGKTQSVKVM----------------------------R 224
Query: 222 ETD-RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE--- 277
+++ +SRGFGF+ EEA+KAV+ + ++ G+LL V +A R + R FE
Sbjct: 225 DSNGQSRGFGFINFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKRAERQNELKRRFEQMK 284
Query: 278 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +YV NL +++ RL++VFS +G + +A+V+ E+ S+GFGFV SS
Sbjct: 285 QERQNRYQGVNLYVKNLDDSINDDRLKEVFSTYGVITSAKVM--TESSHSKGFGFVCFSS 342
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 343 PEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 7/149 (4%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT-QPERAPR 274
+V+YN SRGFGFV T E A+KA+ + ++ R + V R + E R
Sbjct: 129 KVVYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGAR 186
Query: 275 VFEPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
GF IYV NL ++D L+ +FS+ GK + +V+ D G+SRGFGF+ E
Sbjct: 187 AL--GFTNIYVKNLRVDMDEQGLQDLFSQFGKTQSVKVMRD-SNGQSRGFGFINFEKHEE 243
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
A+ ++G+ + G+ + V A+ R R
Sbjct: 244 AQKAVDHMNGKEVSGQLLYVGRAQKRAER 272
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 89/204 (43%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+ L+VG+L DV L +F GT+ + VC
Sbjct: 11 SSLYVGDLHPDVTEAMLYEMFSPIGTI---------------LSIRVCR----------- 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + I G+ + + R P + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEMIKGQPIRI-------MWSHRDPGLRRSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++++VVY+ E G SRGFGFV + AI
Sbjct: 98 MGNIFIKNLENSIDNKALYDTFSTFGSILSSKVVYN-EHG-SRGFGFVHFETHEAAQKAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + RQ+R
Sbjct: 156 NTMNGMLLNDRKVFVGHFKSRQKR 179
>gi|448520030|ref|XP_003868205.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis Co 90-125]
gi|380352544|emb|CCG22770.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis]
Length = 498
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 36/218 (16%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
E F E A +F G L +++D + L FE L G
Sbjct: 246 ESFTTDEEPATIFAGRLSWNIDDDWLKREFE-------------HLEG------------ 280
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRL--LTVNKAAPRGTQ 268
V +VI R T +SRG+G+V S+ AE A+ +IDGR L ++ P T+
Sbjct: 281 -VISARVIMERATGKSRGYGYVDFSSKSAAENAIAEMQGKEIDGRPINLDLSTGKPHATK 339
Query: 269 P--ERAPRVF-----EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSR 321
+RA R F P +++GNL + + +L +VF E+G V++ R+ +T + +
Sbjct: 340 SNNDRA-RQFGDQQSPPSDTLFIGNLSFNANRDKLFEVFGEYGNVISCRLPTHPDTQQPK 398
Query: 322 GFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
GFG+V SS E A+ AL+G+ L+GR R++ + R
Sbjct: 399 GFGYVQFSSVDEAKAALEALNGEYLEGRPCRLDFSAPR 436
>gi|357113599|ref|XP_003558590.1| PREDICTED: glycine-rich RNA-binding protein GRP2A-like
[Brachypodium distachyon]
Length = 102
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P +R++VGNL W D L+ F++HG + A +VYD+E RSRGFGFV + ++DA
Sbjct: 16 PEYRVHVGNLAWGTDERSLKDAFADHGPI-GAEIVYDQEMDRSRGFGFVNFNDHKSMSDA 74
Query: 338 IAALDGQNLDGRAIRVNVAEDRQRR 362
I ++GQ LDGR+I VN A R R+
Sbjct: 75 IQRMNGQELDGRSITVNQANHRARK 99
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 27/108 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
++ VGNL + D L F G + +++Y+
Sbjct: 19 RVHVGNLAWGTDERSLKDAFADHGPIGA---------------------------EIVYD 51
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ 268
+E DRSRGFGFV + + A++ + ++DGR +TVN+A R +
Sbjct: 52 QEMDRSRGFGFVNFNDHKSMSDAIQRMNGQELDGRSITVNQANHRARK 99
>gi|224128992|ref|XP_002328863.1| predicted protein [Populus trichocarpa]
gi|118482403|gb|ABK93124.1| unknown [Populus trichocarpa]
gi|222839293|gb|EEE77630.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G L W D+ L+ FS G+V ARV+ DR+TGRSRGFGFV+ S ++A++A
Sbjct: 37 KLFIGGLAWSTDDQSLKDAFSGFGEVTEARVITDRDTGRSRGFGFVSYESTESASEALSA 96
Query: 341 LDGQNLDGRAIRVNVAEDRQR 361
+DGQ L GR IRV A D+++
Sbjct: 97 MDGQELGGRNIRVGYATDKRQ 117
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 27/111 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLF+G L + D + L F G E+ E + VI
Sbjct: 36 SKLFIGGLAWSTDDQSLKDAFSGFG--EVTEAR------------------------VIT 69
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 270
+R+T RSRGFGFV+ + E A +A+ ++ GR + V A + QP+
Sbjct: 70 DRDTGRSRGFGFVSYESTESASEALSAMDGQELGGRNIRVGYATDK-RQPQ 119
>gi|388566786|ref|ZP_10153228.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
gi|388265964|gb|EIK91512.1| RNA recognition motif-containing protein [Hydrogenophaga sp. PBC]
Length = 133
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 59/84 (70%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + L+Q FS G V +A+V+ +RETGRS+GFGFV M S++E AI
Sbjct: 2 GNKLYVGNLPYTVRDEDLQQAFSAFGAVNSAKVMMERETGRSKGFGFVEMGSDSEAQSAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ+L GR++ VN A + R
Sbjct: 62 QGMNGQSLGGRSLVVNEARPMEPR 85
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 26/112 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V E L F G V A +V+
Sbjct: 4 KLYVGNLPYTVRDEDLQQAFSAFGAVNSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 272
RET RS+GFGFV M + EA+ A++ + + GR L VN+A P +P R+
Sbjct: 38 RETGRSKGFGFVEMGSDSEAQSAIQGMNGQSLGGRSLVVNEARPMEPRPPRS 89
>gi|50543120|ref|XP_499726.1| YALI0A03509p [Yarrowia lipolytica]
gi|49645591|emb|CAG83649.1| YALI0A03509p [Yarrowia lipolytica CLIB122]
Length = 701
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 99/207 (47%), Gaps = 40/207 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFV ++P +V +E+LA F + F V V+ N
Sbjct: 16 LFVRSIPLEVTNEELADFFSQD--------------------------FPVKHAVVVTNA 49
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF- 280
T S+GFGFV+ +T E+A +A+ + + G++L + A PR + R R FE
Sbjct: 50 ATKESKGFGFVSFTTEEDAAEALLKCRKQKLKGKILQIEFAKPR-ERKTREDRPFESSGD 108
Query: 281 ----------RIYVGNLPWEVDNAR-LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
R+ V NLPW V + L +VFS++GKVV+A + G+ GFGFVTMS
Sbjct: 109 NNTSVEKRKPRLIVRNLPWSVREPQDLIKVFSKYGKVVDA-FIPRGAGGKMSGFGFVTMS 167
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVA 356
+ + A+A G +DGR + V+ A
Sbjct: 168 KKQHADKAVAESKGLEIDGRTVTVDFA 194
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 49/82 (59%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++V ++P EV N L FS+ V +A VV + T S+GFGFV+ ++E + +A+
Sbjct: 16 LFVRSIPLEVTNEELADFFSQDFPVKHAVVVTNAATKESKGFGFVSFTTEEDAAEALLKC 75
Query: 342 DGQNLDGRAIRVNVAEDRQRRS 363
Q L G+ +++ A+ R+R++
Sbjct: 76 RKQKLKGKILQIEFAKPRERKT 97
>gi|224149436|ref|XP_002336806.1| predicted protein [Populus trichocarpa]
gi|222836937|gb|EEE75330.1| predicted protein [Populus trichocarpa]
Length = 112
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 60/81 (74%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G LPW D+ L++ FS +G+V+ ARV+ DRETGRSRGFGFV+ S ++A +A
Sbjct: 15 KLFIGGLPWSADDHTLKEAFSGYGEVIEARVIMDRETGRSRGFGFVSYDSSESASEAQSA 74
Query: 341 LDGQNLDGRAIRVNVAEDRQR 361
+DGQ L GR +RV+ AE+R R
Sbjct: 75 MDGQELGGRNVRVSFAEERSR 95
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 48/110 (43%), Gaps = 26/110 (23%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLF+G LP+ D L F +G E+ E + VI
Sbjct: 14 SKLFIGGLPWSADDHTLKEAF--SGYGEVIEAR------------------------VIM 47
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
+RET RSRGFGFV+ + E A +A ++ GR + V+ A R P
Sbjct: 48 DRETGRSRGFGFVSYDSSESASEAQSAMDGQELGGRNVRVSFAEERSRPP 97
>gi|407941455|ref|YP_006857096.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
gi|407899249|gb|AFU48458.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
Length = 188
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 57/84 (67%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + LEQ F + G V +A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR+I VN A + R
Sbjct: 62 NGMNGQPLGGRSIVVNEARPMEPR 85
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 4 KLYVGNLPYSVRDGDLEQAFGQFGAVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
R+T RS+GFGFV M + EA+ A+ + + GR + VN+A P +P
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSIVVNEARPMEPRP 86
>gi|425781927|gb|EKV19861.1| hypothetical protein PDIG_00280 [Penicillium digitatum PHI26]
gi|425784024|gb|EKV21834.1| hypothetical protein PDIP_02540 [Penicillium digitatum Pd1]
Length = 98
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/79 (56%), Positives = 54/79 (68%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+IYVGNL W + L F E G +V++ V+ DRETGRSRGFGFVT SS E AI A
Sbjct: 3 KIYVGNLSWHTSDESLRAAFGEFGNIVDSIVMVDRETGRSRGFGFVTFSSAEEAEAAINA 62
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L+ Q+LDGR IRVN+A R
Sbjct: 63 LNEQDLDGRRIRVNLANAR 81
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+K++VGNL + E L F + G + V ++ V+
Sbjct: 2 SKIYVGNLSWHTSDESLRAAFGEFGNI-------------------VDSI-------VMV 35
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RSRGFGFVT S+ EEAE A+ + D+DGR + VN A R
Sbjct: 36 DRETGRSRGFGFVTFSSAEEAEAAINALNEQDLDGRRIRVNLANAR 81
>gi|73992493|ref|XP_534430.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Canis lupus
familiaris]
Length = 611
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 39/218 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E ++V NL DVD + L LF + G ++ VK
Sbjct: 189 EFTNIYVKNLHVDVDEQGLQDLFSRFG--KMLSVK------------------------- 221
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+ ++ SRGFGFV EEA+KAV + ++ GRLL V +A R + R FE
Sbjct: 222 VMRDDSGHSRGFGFVNFQKHEEAQKAVMDMNGKEVSGRLLYVGRAQKRVERQSELKRRFE 281
Query: 278 ----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
G +YV NL +D+ +L + FS +G + +A+V+ E G S+GFGFV
Sbjct: 282 QLKQDRLTRYQGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVC 339
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
SS E A+ ++G+ L + + V +A+ ++ R +
Sbjct: 340 FSSPEEATKAVTEMNGRILGTKPLYVALAQRKEERKAI 377
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 13/145 (8%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR---- 281
SRGFGFV T E A++A+ + ++ R + V G R R E G R
Sbjct: 137 SRGFGFVHFETHEAAQQAITTMNGMLLNDRKVFV------GHFKSRREREVELGARAMEF 190
Query: 282 --IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
IYV NL +VD L+ +FS GK+++ +V+ D ++G SRGFGFV E A+
Sbjct: 191 TNIYVKNLHVDVDEQGLQDLFSRFGKMLSVKVMRD-DSGHSRGFGFVNFQKHEEAQKAVM 249
Query: 340 ALDGQNLDGRAIRVNVAEDRQRRSS 364
++G+ + GR + V A+ R R S
Sbjct: 250 DMNGKEVSGRLLYVGRAQKRVERQS 274
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 278 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
PGF +YVG+L +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGFPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 335 NDAIAALDGQNLDGRAIRV 353
A+ ++ + + G+ IR+
Sbjct: 66 ERALDTMNFEVIKGQPIRI 84
>gi|298528142|ref|ZP_07015546.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511794|gb|EFI35696.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 84
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVGNLPW A+L F+E G+V +A+++ DRETGRSRGFGFV M E ++AI AL
Sbjct: 4 LYVGNLPWSTTEAQLRDSFAEFGEVSSAKIIEDRETGRSRGFGFVEM--ENGADEAIEAL 61
Query: 342 DGQNLDGRAIRVNVAEDRQ 360
+G++ GR+I+VNVA+ ++
Sbjct: 62 NGKDYGGRSIKVNVAKPKR 80
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 28/104 (26%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
L+VGNLP+ +L F + G V A ++I +R
Sbjct: 4 LYVGNLPWSTTEAQLRDSFAEFGEVSSA--------------------------KIIEDR 37
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET RSRGFGFV M A++A+E + D GR + VN A P+
Sbjct: 38 ETGRSRGFGFVEMEN--GADEAIEALNGKDYGGRSIKVNVAKPK 79
>gi|395005503|ref|ZP_10389380.1| RRM domain-containing RNA-binding protein, partial [Acidovorax sp.
CF316]
gi|394316556|gb|EJE53277.1| RRM domain-containing RNA-binding protein, partial [Acidovorax sp.
CF316]
Length = 110
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 58/84 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V ++ LEQ F + G V +A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDPEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR+I VN A + R
Sbjct: 62 NGMNGQPLGGRSIVVNEARPMEPR 85
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 26/112 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 4 KLYVGNLPYSVRDSDLEQAFGQFGAVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 272
R+T RS+GFGFV M + EA+ A+ + + GR + VN+A P +P R+
Sbjct: 38 RDTGRSKGFGFVEMGSDPEAQAAINGMNGQPLGGRSIVVNEARPMEPRPPRS 89
>gi|358372661|dbj|GAA89263.1| C6 transcription factor [Aspergillus kawachii IFO 4308]
Length = 1068
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 31/208 (14%)
Query: 155 EPPEDAK-LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
EPP + +F+GN+ YDV E L EK G VE K + N+G
Sbjct: 877 EPPTPKETVFIGNIFYDVTREDLKKAMEKYGVVE----KVVLVLDNRGI----------- 921
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAP 273
S+G+G+V +++ A++AV+ + +GR +TV + A R
Sbjct: 922 ------------SKGYGYVQFDSIDAAQRAVDALNLRLFEGRRVTV-QFAQNNVYHRR-- 966
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
++ P +Y+GNLP+E+ + L ++F + VV+ RV DR TG++RGF S +
Sbjct: 967 QLNAPTRTLYIGNLPFEMTDRDLNELFKDVQNVVDIRVAVDRRTGQARGFAHAEFVSTSS 1026
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDRQR 361
A+A L+ + GR +R++ ++ R
Sbjct: 1027 AKAAMAVLENKLPYGRRLRLDYSKATSR 1054
>gi|91786529|ref|YP_547481.1| RNA recognition motif-containing protein [Polaromonas sp. JS666]
gi|91695754|gb|ABE42583.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
Length = 134
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 58/84 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + L+Q F G + +A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLPYTVRDEDLQQSFGAFGSITSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
A ++GQ+L GR+I VN A + R
Sbjct: 62 AGMNGQSLGGRSITVNEARPMEAR 85
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 26/111 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V E L F G++ A +V+
Sbjct: 4 KLYVGNLPYTVRDEDLQQSFGAFGSITSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
R+T RS+GFGFV M + EA+ A+ + + GR +TVN+A P +P R
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAIAGMNGQSLGGRSITVNEARPMEARPPR 88
>gi|398803602|ref|ZP_10562623.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
gi|398096229|gb|EJL86556.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
Length = 133
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 58/84 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + L+Q F G + +A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLPYTVRDEDLQQSFGAFGSITSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
A ++GQ+L GR+I VN A + R
Sbjct: 62 AGMNGQSLGGRSITVNEARPMEAR 85
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 26/111 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V E L F G++ A +V+
Sbjct: 4 KLYVGNLPYTVRDEDLQQSFGAFGSITSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
R+T RS+GFGFV M + EA+ A+ + + GR +TVN+A P +P R
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAIAGMNGQSLGGRSITVNEARPMEARPPR 88
>gi|196008415|ref|XP_002114073.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
gi|190583092|gb|EDV23163.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
Length = 622
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 38/213 (17%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
L+V N D+ ++ LFE+ G + VS V+
Sbjct: 202 LYVKNFRDDISDDEFRDLFEQCGKI-------------------------VSC--VVMRD 234
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
++ +SRGFGFV+ T E A+KAVE + + D R + V +A + + R +E
Sbjct: 235 DSGKSRGFGFVSYETHEAAQKAVETLNEKEFDLRRMYVARAQKKSERSALLRRQYEQKKQ 294
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL +D+A+L Q F+ G + +A+V+ D E G SRGFGFV SS
Sbjct: 295 EMMKRFQGVNLYVKNLDDVIDDAKLRQEFANFGTITSAKVMSD-EKGISRGFGFVCFSSP 353
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 354 EEATKAVTEMNGRIIISKPLYVALAQRKEDRKA 386
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 87/204 (42%), Gaps = 28/204 (13%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+F+ NL D+D++ + F G + ++
Sbjct: 109 IFIKNLEKDIDNKAIYDTFSAFGNILSCKIALD--------------------------- 141
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
E S+G+ FV T E A +A+E + + G+ + V R + E+ +
Sbjct: 142 ENGNSKGYAFVHFETQEAANRAIEKVNGMLLSGKKVFVGHFMSRKERMEKIGNLAAKYTN 201
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YV N ++ + +F + GK+V+ V+ D ++G+SRGFGFV+ + A+ L
Sbjct: 202 LYVKNFRDDISDDEFRDLFEQCGKIVSCVVMRD-DSGKSRGFGFVSYETHEAAQKAVETL 260
Query: 342 DGQNLDGRAIRVNVAEDRQRRSSF 365
+ + D R + V A+ + RS+
Sbjct: 261 NEKEFDLRRMYVARAQKKSERSAL 284
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 35/202 (17%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
L+VG+L DV+ +L F G +S ++V +
Sbjct: 21 LYVGDLAPDVNEAQLYEKFNSTGP--------------------------ISSIRVCRDA 54
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF- 280
T RS G+ +V +AE+A++ + +D VN R +R P + G
Sbjct: 55 ITRRSLGYAYVNFQQPNDAERALDTLN-FD------PVNGKPCRIMWSQRDPSLRRSGVG 107
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
I++ NL ++DN + FS G +++ ++ D E G S+G+ FV ++ N AI
Sbjct: 108 NIFIKNLEKDIDNKAIYDTFSAFGNILSCKIALD-ENGNSKGYAFVHFETQEAANRAIEK 166
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
++G L G+ + V R+ R
Sbjct: 167 VNGMLLSGKKVFVGHFMSRKER 188
>gi|2674201|gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 164
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 56/78 (71%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W + L++ FS +G++++++++ DRETGRSRGFGFVT ++E + DAI
Sbjct: 7 YRCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKSMRDAIQ 66
Query: 340 ALDGQNLDGRAIRVNVAE 357
++ Q LDGR I VN A+
Sbjct: 67 GMNSQELDGRNITVNEAQ 84
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
++I +RET RSRGFGFVT + + A++ + ++DGR +TVN+A
Sbjct: 37 KIINDRETGRSRGFGFVTFNNEKSMRDAIQGMNSQELDGRNITVNEA 83
>gi|116787897|gb|ABK24684.1| unknown [Picea sitchensis]
Length = 375
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
++ +R T + RGFGFVT + +K +E H +DGR + + + PRG + P+
Sbjct: 77 IMKDRHTGQPRGFGFVTYADASVVDKVIEDKHI--LDGRTVEIKRTIPRGNT-SKGPKTK 133
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
+I+VG +P + + FS+ GKV +++ DR TGRSRGFGF+T SE + +
Sbjct: 134 ----KIFVGGIPTTITEDEFKDYFSKFGKVAEHQIMQDRSTGRSRGFGFITFDSEQVVEE 189
Query: 337 AIAALDGQNLDGRAIRVNVAEDRQ 360
I+ L G+ + + AE ++
Sbjct: 190 IISQGKMIELGGKQVEIKKAEPKK 213
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
PG +I++G L + FS++G++ ++ ++ DR TG+ RGFGFVT + + ++
Sbjct: 45 PG-KIFIGGLSRSTTTVVFTKHFSKYGELTDSVIMKDRHTGQPRGFGFVTYADASVVDKV 103
Query: 338 IAALDGQNLDGRAIRV 353
I D LDGR + +
Sbjct: 104 IE--DKHILDGRTVEI 117
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 26/117 (22%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P+ K+FVG +P + ++ F K G ++AE Q
Sbjct: 130 PKTKKIFVGGIPTTITEDEFKDYFSKFG--KVAE------------------------HQ 163
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAP 273
++ +R T RSRGFGF+T + + E+ + ++ G+ + + KA P+ + P
Sbjct: 164 IMQDRSTGRSRGFGFITFDSEQVVEEIISQGKMIELGGKQVEIKKAEPKKPSSDAGP 220
>gi|428165677|gb|EKX34667.1| hypothetical protein GUITHDRAFT_119213 [Guillardia theta CCMP2712]
Length = 219
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 58/80 (72%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
F ++VGNLP+ + A L+ +F +HG+VV+ +++D+E+GR RGFGFV +E DA++
Sbjct: 135 FTLFVGNLPFRISEAELQALFEKHGEVVSVSLIHDQESGRPRGFGFVDYDNEQSAKDAVS 194
Query: 340 ALDGQNLDGRAIRVNVAEDR 359
L+G LDGR I V+++ED+
Sbjct: 195 NLNGMPLDGREISVSISEDK 214
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 29/125 (23%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDA-KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHF 195
++Q+++ +G E++F + A LFVGNLP+ + +L LFEK G V
Sbjct: 113 QKQDQANSQG--GEKKFRHDRKGAFTLFVGNLPFRISEAELQALFEKHGEV--------- 161
Query: 196 LFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGR 255
VSL I+++E+ R RGFGFV + A+ AV + +DGR
Sbjct: 162 --------------VSVSL---IHDQESGRPRGFGFVDYDNEQSAKDAVSNLNGMPLDGR 204
Query: 256 LLTVN 260
++V+
Sbjct: 205 EISVS 209
>gi|148905890|gb|ABR16107.1| unknown [Picea sitchensis]
gi|224285605|gb|ACN40521.1| unknown [Picea sitchensis]
gi|224285970|gb|ACN40697.1| unknown [Picea sitchensis]
Length = 371
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
++ +R T RGFGFVT + +K ++ H IDG+++ + + PRG + P+
Sbjct: 82 IMKDRATGNPRGFGFVTYADPSVVDKVIKDKHF--IDGKMVEIKRTIPRGNAATKGPKTK 139
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
+I+VG +P + + FS+ GKV+ +++ D TGRSRGFGFVT SE + +
Sbjct: 140 ----KIFVGGIPTSITEDEFKDYFSKFGKVLEHQIMQDHGTGRSRGFGFVTFDSEEAVEE 195
Query: 337 AIAALDGQNLDGRAIRVNVAEDRQ 360
++ L G+ + + AE ++
Sbjct: 196 ILSHGKMCELGGKQVEIKKAEPKK 219
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
PG +I++G L E +A + FS++G++ ++ ++ DR TG RGFGFVT + + ++
Sbjct: 50 PG-KIFIGGLSRETSSATFTKYFSKYGELTDSVIMKDRATGNPRGFGFVTYADPSVVDKV 108
Query: 338 IAALDGQNLDGRAIRV 353
I D +DG+ + +
Sbjct: 109 IK--DKHFIDGKMVEI 122
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 33/134 (24%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P+ K+FVG +P + ++ F K G V Q
Sbjct: 136 PKTKKIFVGGIPTSITEDEFKDYFSKFGKV--------------------------LEHQ 169
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV- 275
++ + T RSRGFGFVT + E E+ + ++ G+ + + KA P+ PE P
Sbjct: 170 IMQDHGTGRSRGFGFVTFDSEEAVEEILSHGKMCELGGKQVEIKKAEPKKALPEPEPAYG 229
Query: 276 ------FEPGFRIY 283
F PG R Y
Sbjct: 230 MDGRPPFIPGARGY 243
>gi|194672643|ref|XP_882298.3| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 19
[Bos taurus]
gi|297482024|ref|XP_002692514.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Bos taurus]
gi|296480945|tpg|DAA23060.1| TPA: polyadenylate-binding protein 1-like [Bos taurus]
Length = 613
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 39/218 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E ++V NL DVD ++L LF + G ++ VK
Sbjct: 189 EFTNIYVKNLHVDVDEQRLQDLFSQFG--KMLSVK------------------------- 221
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+ ++ SRGFGFV EEA+KAV + ++ GRLL V +A R + R FE
Sbjct: 222 VMRDDSGHSRGFGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGRAQKRVERQNELKRRFE 281
Query: 278 ----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
G +YV NL +D+ +L + FS +G + +A+V+ E G S+GFGFV
Sbjct: 282 QMKQDRLTRYQGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVC 339
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
SS E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML+EK F G + ++V
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEK--------------FSPAG---------PILSIRVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + I G+ + + + +R P + + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEVIKGQPIRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++ +VV D E G SRGFGFV + +AI
Sbjct: 98 VGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCD-EHG-SRGFGFVHFETHEAAQNAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
+ ++G L+ R + V + R+ R
Sbjct: 156 STMNGMLLNDRKVFVGHFKSRRER 179
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 278 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
PG+ +YVG+L +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 335 NDAIAALDGQNLDGRAIRV 353
A+ ++ + + G+ IR+
Sbjct: 66 ERALDTMNFEVIKGQPIRI 84
>gi|426242065|ref|XP_004014898.1| PREDICTED: polyadenylate-binding protein 1-like [Ovis aries]
Length = 611
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 39/218 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E ++V NL DVD ++L LF + G ++ VK
Sbjct: 189 EFTNIYVKNLHVDVDEQRLQDLFSQFG--KMLSVK------------------------- 221
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+ ++ SRGFGFV EEA+KAV + ++ GRLL V +A R + R FE
Sbjct: 222 VMRDDSGHSRGFGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGRAQKRVERQNELKRRFE 281
Query: 278 ----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
G +YV NL +D+ +L + FS +G + +A+V+ E G S+GFGFV
Sbjct: 282 QMKQDRLTRYQGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVC 339
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
SS E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+LP DV AML+EK F G + + +V
Sbjct: 11 ASLYVGDLPPDVTE---AMLYEK--------------FSPAGPILSI---------RVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + I G+ + + + +R P + + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEVIKGQPIRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++ +VV D E G SRGFGFV + +AI
Sbjct: 98 VGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCD-EHG-SRGFGFVHFETHEAAQNAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
+ ++G L+ R + V + R+ R
Sbjct: 156 STMNGMLLNDRKVFVGHFKSRRER 179
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 278 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
PG+ +YVG+LP +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLPPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 335 NDAIAALDGQNLDGRAIRV 353
A+ ++ + + G+ IR+
Sbjct: 66 ERALDTMNFEVIKGQPIRI 84
>gi|334339635|ref|YP_004544615.1| RNP-1 like RNA-binding protein [Desulfotomaculum ruminis DSM 2154]
gi|334090989|gb|AEG59329.1| RNP-1 like RNA-binding protein [Desulfotomaculum ruminis DSM 2154]
Length = 85
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVGNLPW L++ FS++G+V+++RV+ DRETGRSRGFGFV ++ E + +AAL
Sbjct: 4 LYVGNLPWATKAEDLQEAFSQYGEVISSRVITDRETGRSRGFGFVEVNDE-DAEKMVAAL 62
Query: 342 DGQNLDGRAIRVNVAEDRQ 360
+G +L+GR I VN A+ R+
Sbjct: 63 NGTDLNGRVITVNEAKSRE 81
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 27/106 (25%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VGNLP+ +E L F + G V + +VI
Sbjct: 2 ATLYVGNLPWATKAEDLQEAFSQYGEVISS--------------------------RVIT 35
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RSRGFGFV ++ E+AEK V + D++GR++TVN+A R
Sbjct: 36 DRETGRSRGFGFVEVND-EDAEKMVAALNGTDLNGRVITVNEAKSR 80
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 271 RAPRVFE--PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
+A R F P +++VG + + D L FS++G+V++AR++ DRE+GRS+GFGFVT
Sbjct: 33 QAIRCFSSTPNTKLFVGGISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTY 92
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
++ E + AI ALDGQ+L GR + VN A +R R
Sbjct: 93 NTVEEASSAIQALDGQDLYGRRVGVNFANERPR 125
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 26/119 (21%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
VF+ + KLFVG + Y+ D + L+ F K G V A
Sbjct: 31 VFQAIRCFSSTPNTKLFVGGISYNTDEQSLSDAFSKYGQVLDA----------------- 73
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
++I +RE+ RS+GFGFVT +TVEEA A++ D+ GR + VN A R
Sbjct: 74 ---------RIIMDRESGRSKGFGFVTYNTVEEASSAIQALDGQDLYGRRVGVNFANER 123
>gi|406883357|gb|EKD30966.1| hypothetical protein ACD_77C00438G0003 [uncultured bacterium]
Length = 117
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 56/79 (70%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
I++ NL W V +A L ++F+E+G++ +A+V+ DRETG+SRGFGFV M +E E AI L
Sbjct: 3 IFISNLSWAVRDADLRELFAEYGEISSAKVITDRETGKSRGFGFVEMPTEAEAKKAIEEL 62
Query: 342 DGQNLDGRAIRVNVAEDRQ 360
D DG+ I VNVA+ R+
Sbjct: 63 DQAEYDGKVISVNVAKPRE 81
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+S +VI +RET +SRGFGFV M T EA+KA+E + + DG++++VN A PR
Sbjct: 27 ISSAKVITDRETGKSRGFGFVEMPTEAEAKKAIEELDQAEYDGKVISVNVAKPR 80
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 38/211 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
L++ NL +V E+ LF + G+V A V+
Sbjct: 228 LYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVD--------------------------- 260
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
+ RS+GFGFV + EEA+ AV+ H D+ G+ L V +A + + E R +E
Sbjct: 261 DEGRSKGFGFVNYESHEEAQAAVDNLHDTDLKGKKLYVTRAQKKAEREEELRRSYEQAKM 320
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL +VD+ +L F G + + +V+ D E G S+GFGFV SS
Sbjct: 321 EKLSKYQGVNLYVKNLEDDVDDDKLRAEFEPFGTITSCKVMSD-EKGSSKGFGFVCFSSP 379
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
E AIA ++ + + + + V++A+ R+ R
Sbjct: 380 DEATKAIAEMNNKMIGSKPLYVSLAQRREVR 410
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 2/164 (1%)
Query: 199 NQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 258
N+ H A V +V + E RS+G+GFV T E AE A++ + ++ + +
Sbjct: 146 NKALHDTFVAFGNVLSCKVATD-EQGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVY 204
Query: 259 VNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 318
V PR + + + +Y+ NL EV E++F+ +G V +A V D E G
Sbjct: 205 VGPHIPRKERQSKLDEMKAQFTNLYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVDDE-G 263
Query: 319 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
RS+GFGFV S E A+ L +L G+ + V A+ + R
Sbjct: 264 RSKGFGFVNYESHEEAQAAVDNLHDTDLKGKKLYVTRAQKKAER 307
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
V+ ++V + T RS G+ +V + E+A+E + I GR + + +R
Sbjct: 71 VASIRVCRDAVTRRSLGYAYVNYLNTADGERALEQLNYSLIKGRPCRIMWS-------QR 123
Query: 272 APRVFEPG-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
P + + G I++ NL ++DN L F G V++ +V D E GRS+G+GFV +
Sbjct: 124 DPALRKTGQGNIFIKNLDEQIDNKALHDTFVAFGNVLSCKVATD-EQGRSKGYGFVHYET 182
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
AI A++G L+ + + V R+ R S
Sbjct: 183 AEAAETAIKAVNGMLLNDKKVYVGPHIPRKERQS 216
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P +YVG L V A + ++F+ G V + RV D T RS G+ +V + + A
Sbjct: 43 PSASLYVGELDPTVTEAMIFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTADGERA 102
Query: 338 IAALDGQNLDGRAIRV 353
+ L+ + GR R+
Sbjct: 103 LEQLNYSLIKGRPCRI 118
>gi|337281472|ref|YP_004620944.1| glycine-rich RNA binding protein [Ramlibacter tataouinensis TTB310]
gi|334732549|gb|AEG94925.1| Candidate glycine-rich RNA binding protein [Ramlibacter
tataouinensis TTB310]
Length = 159
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 59/84 (70%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V ++ LEQ FS+ G V +A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLPYSVRDSDLEQAFSQFGAVSSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR++ VN A + R
Sbjct: 62 NGMNGQPLGGRSVVVNEARPMESR 85
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 26/109 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 4 KLYVGNLPYSVRDSDLEQAFSQFGAVSSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
R+T RS+GFGFV M + EA+ A+ + + GR + VN+A P ++P
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSVVVNEARPMESRP 86
>gi|242064522|ref|XP_002453550.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
gi|241933381|gb|EES06526.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
Length = 391
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 33/205 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
K+FVG + ++ E + FEK G + + ++
Sbjct: 56 GKIFVGGVAWETTEESFSKHFEKYGAITDS--------------------------VIMK 89
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEP 278
++ T RGFGFVT S +K +E H IDGR + V + PR + P+
Sbjct: 90 DKHTKMPRGFGFVTFSDPSVIDKVLEDDHV--IDGRTVEVKRTVPREEMTTKDGPKTR-- 145
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+I++G LP + L+ FS +GKVV +++ D TGRSRGFGFVT SE + I
Sbjct: 146 --KIFIGGLPPSLTEDELKDHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVI 203
Query: 339 AALDGQNLDGRAIRVNVAEDRQRRS 363
+ ++L G+ + + AE ++ S
Sbjct: 204 SEGRMRDLGGKQVEIKKAEPKKHGS 228
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 26/117 (22%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCA 208
EE + P+ K+F+G LP + ++L F G V
Sbjct: 134 EEMTTKDGPKTRKIFIGGLPPSLTEDELKDHFSSYGKV---------------------- 171
Query: 209 VFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
Q++ + T RSRGFGFVT + + E+ + D+ G+ + + KA P+
Sbjct: 172 ----VEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 224
>gi|356544204|ref|XP_003540544.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 364
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 34/206 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DA +VGNL + E L LF +AG V +++V
Sbjct: 23 QDATAYVGNLDPQICEELLWELFVQAGPV---------------VNVYVPK--------- 58
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+R T++ +G+GFV + E+A+ A+++ + + G+ + VNKA+ + + +
Sbjct: 59 --DRVTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-------QDKKSLD 109
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVV-NARVVYDRETGRSRGFGFVTMSSETELND 336
G +++GNL +VD L FS G +V N +++ D ETG SRGFGF++ S +
Sbjct: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDS 169
Query: 337 AIAALDGQNLDGRAIRVNVAEDRQRR 362
AI A++GQ L R I V+ A + +
Sbjct: 170 AIEAMNGQYLCNRQITVSYAYKKDTK 195
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF+GNL DVD + L F G + V+ +++
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVI-------------------------VTNPKIMR 146
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+ ET SRGFGF++ + E ++ A+E + + R +TV+ A + T+ ER
Sbjct: 147 DPETGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
>gi|115529229|dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Dianthus caryophyllus]
Length = 163
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 57/78 (73%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L + F++ G+V +++++ DRETGRSRGFGFVT ++E + DAI
Sbjct: 6 YRCFVGGLSWGTDDRSLAEAFNKFGEVTDSKIINDRETGRSRGFGFVTFANEQSMRDAID 65
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR+I VN A+
Sbjct: 66 EMNGKELDGRSITVNEAQ 83
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D LA F K G E+ + K +I +
Sbjct: 7 RCFVGGLSWGTDDRSLAEAFNKFG--EVTDSK------------------------IIND 40
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT + + A++ + ++DGR +TVN+A
Sbjct: 41 RETGRSRGFGFVTFANEQSMRDAIDEMNGKELDGRSITVNEA 82
>gi|425434339|ref|ZP_18814808.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|425450077|ref|ZP_18829909.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440751641|ref|ZP_20930844.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
gi|389676192|emb|CCH94745.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9432]
gi|389769258|emb|CCI05857.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 7941]
gi|440176134|gb|ELP55407.1| RNA recognition motif family protein [Microcystis aeruginosa
TAIHU98]
Length = 97
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNLP+EVD + +VF E+GK+ + DRETG+ RGF FV M + E AIAAL
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIAAL 62
Query: 342 DGQNLDGRAIRVNVAEDRQRRSSF 365
DG GR ++VN A +R+ +SSF
Sbjct: 63 DGAQWMGRELKVNQAREREPKSSF 86
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNLP++VD + + +F++ G ++ + + +R
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIK--------------------------RVHLPMDR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET + RGF FV M T EE KA+ GR L VN+A R
Sbjct: 37 ETGKKRGFAFVEMETPEEETKAIAALDGAQWMGRELKVNQARER 80
>gi|432876616|ref|XP_004073061.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 300
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 34/203 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
KLFVG L D D + L FE+ GT + C V+
Sbjct: 6 CKLFVGGLNVDTDDDGLRKHFEQFGT------------------LTDCV--------VVV 39
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR--GTQPERAPRVFE 277
N++ RSR FGFVT ST EEA+ A+ + +DG + V +A R +PE +V
Sbjct: 40 NKQLQRSRCFGFVTYSTPEEADAAMAA-RPHTVDGNAVEVKRAVAREDANRPEALAKV-- 96
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
+I+VG L +++ L FS++G+V + V+ ++ETG+ RGFGFV + + A
Sbjct: 97 --KKIFVGGLKDDIEEDHLTDYFSQYGEVEKSEVISEKETGKKRGFGFVYFTDHDSADKA 154
Query: 338 IAALDGQNLDGRAIRVNVAEDRQ 360
+ + ++G + V A +Q
Sbjct: 155 V-VVKFHTVNGHKVEVKKALTKQ 176
>gi|254566735|ref|XP_002490478.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|238030274|emb|CAY68197.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|328350869|emb|CCA37269.1| Nuclear polyadenylated RNA-binding protein 4 [Komagataella pastoris
CBS 7435]
Length = 462
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 37/205 (18%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E K+F+G L ++ E L F + FG+ ++ L +
Sbjct: 151 EQGKMFIGGLNWETTEETLRNYFGQ--------------FGD------------ITDLTI 184
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+ + T RSRGFGF+T + ++ ++ H +DG+L+ +A PR Q +
Sbjct: 185 MRDNATGRSRGFGFLTFTKTASVDEVLKKQHV--LDGKLIDPKRAIPREEQDKTG----- 237
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
+I+VG + EV FS+ G +++A+++ D++TGRSRGFGFVT S + D
Sbjct: 238 ---KIFVGGIAAEVTEEDFTDYFSQFGTIIDAQLMIDKDTGRSRGFGFVTYDSPDAV-DR 293
Query: 338 IAALDGQNLDGRAIRVNVAEDRQRR 362
+ A L GR++ + AE R ++
Sbjct: 294 VCANKYVPLKGRSMEIKRAEPRNQQ 318
>gi|406601704|emb|CCH46665.1| putative RNA-binding protein [Wickerhamomyces ciferrii]
Length = 479
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 97/206 (47%), Gaps = 49/206 (23%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
AK+F+G L +D E+L F K G EV H ++
Sbjct: 128 AKMFIGGLDWDTSEERLKEYFSKFG-----EVIDH---------------------TIMR 161
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
T RSRGFGF+T + ++ V+ H +DG+++ +A PR Q +
Sbjct: 162 ESSTGRSRGFGFLTFAEPRSVDEVVKTEHV--LDGKVIDPKRAIPRDEQDKTG------- 212
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+I+VG + EV E F + G +++A+++ D++TGRSRGFGFVT DA
Sbjct: 213 -KIFVGGIAPEVRPKEFENFFGKFGTIIDAQLMLDKDTGRSRGFGFVTF-------DAPD 264
Query: 340 ALD----GQNLD--GRAIRVNVAEDR 359
A+D G+ LD GR I V AE R
Sbjct: 265 AVDRVCQGRYLDFNGRQIEVKRAEPR 290
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 29/108 (26%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
K+FVG + +V ++ F K GT+ A Q++
Sbjct: 212 GKIFVGGIAPEVRPKEFENFFGKFGTIIDA--------------------------QLML 245
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRY-DIDGRLLTVNKAAPRG 266
+++T RSRGFGFVT + ++ + RY D +GR + V +A PRG
Sbjct: 246 DKDTGRSRGFGFVTFDAPDAVDRVCQ--GRYLDFNGRQIEVKRAEPRG 291
>gi|156348369|ref|XP_001621824.1| hypothetical protein NEMVEDRAFT_v1g143489 [Nematostella vectensis]
gi|156208104|gb|EDO29724.1| predicted protein [Nematostella vectensis]
Length = 89
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHG-KVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+R Y+GNL + VD LE+ F HG VV+ +V+ DRETGR RGFGFVT S+ E+ AI
Sbjct: 5 YRCYIGNLSYSVDEQALEEKF--HGCDVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAI 62
Query: 339 AALDGQNLDGRAIRVNVAEDRQRRSS 364
DGQ+ DGR ++VN A+ R R +
Sbjct: 63 DEFDGQDFDGRPMKVNQAQPRGERGA 88
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 56/109 (51%), Gaps = 27/109 (24%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E+ + ++GNL Y VD + L E KFH C V V +V
Sbjct: 3 EEYRCYIGNLSYSVDEQAL-------------EEKFH-----------GCDVVDV---KV 35
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRG 266
I +RET R RGFGFVT + EE EKA++ F D DGR + VN+A PRG
Sbjct: 36 ITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDFDGRPMKVNQAQPRG 84
>gi|52346030|ref|NP_001005062.1| embryonic polyadenylate-binding protein [Xenopus (Silurana)
tropicalis]
gi|82235830|sp|Q6DEY7.1|EPAB_XENTR RecName: Full=Embryonic polyadenylate-binding protein;
Short=Embryonic poly(A)-binding protein; Short=ePABP
gi|49899948|gb|AAH76956.1| MGC89376 protein [Xenopus (Silurana) tropicalis]
Length = 629
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 84/154 (54%), Gaps = 12/154 (7%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
+T RSRGFGFV EEA+KAV + +++GR++ V +A R + R FE
Sbjct: 226 DTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQ 285
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL +D+ RL + FS +G + +A+V+ E G S+GFGFV SS
Sbjct: 286 ERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVM--TEGGHSKGFGFVCFSSP 343
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 344 EEATKAVTEMNGRIVSTKPLYVALAQRKEERKAI 377
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNK-AAPRGTQPERAPRVFEPGFRIYV 284
SRG+GFV T E A +A++ + ++ R + V + R + E +V E +Y+
Sbjct: 137 SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVME-FTNVYI 195
Query: 285 GNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 344
N ++D+ RL ++FS G ++ +V+ D +TGRSRGFGFV + E A++ ++G+
Sbjct: 196 KNFGEDMDDKRLREIFSAFGNTLSVKVMMD-DTGRSRGFGFVNYGNHEEAQKAVSEMNGK 254
Query: 345 NLDGRAIRVNVAEDRQRR 362
++GR I V A+ R R
Sbjct: 255 EVNGRMIYVGRAQKRIER 272
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML+EK F G M + +V
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEK--------------FSPAGPIMSI---------RVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + I GR + + + +R P + + G
Sbjct: 45 DIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN L FS G +++ +VV D E G SRG+GFV ++ N AI
Sbjct: 98 VGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCD-EHG-SRGYGFVHFETQEAANRAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + R+ R
Sbjct: 156 QTMNGMLLNDRKVFVGHFKSRRER 179
>gi|333917516|ref|YP_004491248.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|333747716|gb|AEF92893.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 179
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 58/84 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + LEQ FS+ G V +ARV+ +R+TGRS+GFGFV M S+ E A+
Sbjct: 2 GNKLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQAAV 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR++ VN A + R
Sbjct: 62 QGMNGQPLGGRSLVVNEARPMEPR 85
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 26/112 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 4 KLYVGNLPYGVRDNDLEQAFSQFGAVTSA--------------------------RVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 272
R+T RS+GFGFV M + EA+ AV+ + + GR L VN+A P +P R+
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAVQGMNGQPLGGRSLVVNEARPMEPRPPRS 89
>gi|111162637|gb|ABH07505.1| glycine-rich RNA-binding protein [Nicotiana attenuata]
Length = 152
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W + L FS+ G++++++++ DRETGRSRGFGFVT E + DAI
Sbjct: 6 YRCFVGGLAWATTDQTLGDAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIE 65
Query: 340 ALDGQNLDGRAIRVNVAE 357
+ GQ+LDGR I VN A+
Sbjct: 66 GMKGQDLDGRNITVNEAQ 83
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
++I +RET RSRGFGFVT + A+E D+DGR +TVN+A
Sbjct: 36 KIINDRETGRSRGFGFVTFKDEKAMRDAIEGMKGQDLDGRNITVNEA 82
>gi|160901478|ref|YP_001567060.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|160367062|gb|ABX38675.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
Length = 176
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 58/84 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + LEQ FS+ G V +ARV+ +R+TGRS+GFGFV M S+ E A+
Sbjct: 2 GNKLYVGNLPYGVRDNDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQAAV 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR++ VN A + R
Sbjct: 62 QGMNGQPLGGRSLVVNEARPMEPR 85
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 26/112 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 4 KLYVGNLPYGVRDNDLEQAFSQFGAVTSA--------------------------RVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 272
R+T RS+GFGFV M + EA+ AV+ + + GR L VN+A P +P R+
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAVQGMNGQPLGGRSLVVNEARPMEPRPPRS 89
>gi|327305247|ref|XP_003237315.1| nucleic acid-binding protein [Trichophyton rubrum CBS 118892]
gi|326460313|gb|EGD85766.1| nucleic acid-binding protein [Trichophyton rubrum CBS 118892]
Length = 293
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 99/212 (46%), Gaps = 38/212 (17%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
EP A ++VGN+ +D+ + L K G V + ++ ++G
Sbjct: 77 EPQPKATVYVGNILFDITAADLKEYASKYGKV----LGTRIIYDSRGL------------ 120
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERA 272
SRGFG+V +VEEA+KA++ H + +GR L+VN A R QP+R
Sbjct: 121 -----------SRGFGYVKFESVEEAKKAIDEMHLSEYEGRKLSVNFAQVDLRDEQPQRK 169
Query: 273 PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
EP I+VGN+ +V + L +F + V + RV DR TG RGF T
Sbjct: 170 ---MEPTRTIFVGNIAHQVTDRDLHALFDDIPNVFDVRVAVDRRTGMPRGFAHAEF---T 223
Query: 333 ELNDAIAA---LDGQNLDGRAIRVNVAEDRQR 361
++ AIA L GQ GR +R++ + +R
Sbjct: 224 DVESAIAGFEMLKGQAPYGRPLRLDYSHSARR 255
>gi|375108277|ref|ZP_09754538.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
gi|374669008|gb|EHR73793.1| RRM domain-containing RNA-binding protein [Burkholderiales
bacterium JOSHI_001]
Length = 167
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 57/84 (67%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNL + V + L+ FS+ G V +A+V+ DRETGRS+GFGFV M + E AI
Sbjct: 2 GNKLYVGNLAYSVRDESLQAAFSQFGTVTSAKVMMDRETGRSKGFGFVEMGTGAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L+GRA+ VN A R+ R
Sbjct: 62 NGMNGQPLEGRAVVVNEARPREER 85
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 53/109 (48%), Gaps = 26/109 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL Y V E L F + GTV A +V+ +
Sbjct: 4 KLYVGNLAYSVRDESLQAAFSQFGTVTSA--------------------------KVMMD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
RET RS+GFGFV M T EA+ A+ + ++GR + VN+A PR +P
Sbjct: 38 RETGRSKGFGFVEMGTGAEAQAAINGMNGQPLEGRAVVVNEARPREERP 86
>gi|195055059|ref|XP_001994440.1| GH17116 [Drosophila grimshawi]
gi|193892203|gb|EDV91069.1| GH17116 [Drosophila grimshawi]
Length = 379
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 36/229 (15%)
Query: 135 AGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFH 194
G + G +++ EP KLF+G L Y + L FEK G +
Sbjct: 2 GGHNDQNGNSNGQHDDDSITEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQI-------- 53
Query: 195 FLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMS---TVEEAEKAVEMFHRYD 251
V ++ V+ + T RSRGFGF+T S V+EA+KA +
Sbjct: 54 -----------------VDVV-VMKDPRTKRSRGFGFITYSHSSMVDEAQKARP----HK 91
Query: 252 IDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARV 311
IDGR++ +A PR Q +P +++VG L + D L F +G +V+ +
Sbjct: 92 IDGRVVEPKRAVPR--QEIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGSIVDINI 149
Query: 312 VYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
V D+ETG+ RGF FV + D + L+G+ + V A +Q
Sbjct: 150 VMDKETGKKRGFAFVEFDDYDPV-DKVVLQKQHQLNGKMVDVKKALPKQ 197
>gi|223974749|gb|ACN31562.1| unknown [Zea mays]
Length = 326
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + +AI
Sbjct: 8 YRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIE 67
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
++G+ LDGR I VN A+ R+
Sbjct: 68 GMNGKELDGRNITVNEAQFRR 88
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
++I +RET RSRGFGFVT ST E A+E + ++DGR +TVN+A R P
Sbjct: 38 KIILDRETQRSRGFGFVTFSTEEAMRNAIEGMNGKELDGRNITVNEAQFRRLTP 91
>gi|119188517|ref|XP_001244865.1| hypothetical protein CIMG_04306 [Coccidioides immitis RS]
gi|392867773|gb|EAS33469.2| nucleic acid-binding protein [Coccidioides immitis RS]
Length = 334
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 27/196 (13%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNL +DV + L F K G VE L+ +G
Sbjct: 143 IYVGNLFFDVTAGDLKNEFSKCGPVE----GVRLLYDYRGV------------------- 179
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
S+GFG+V VE AEKAV + H +GR L VN A +P P
Sbjct: 180 ----SKGFGYVKFHDVETAEKAVALMHGQLFEGRHLAVNFARVELDKPMNHDPTKPPTRT 235
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+Y+GN+P+E+ + L ++F + +++ RV DR TGR+RGF + A L
Sbjct: 236 LYIGNIPFEMTDRDLNELFKDVDNIIDVRVAVDRRTGRARGFVHADFTDIESARKAFTLL 295
Query: 342 DGQNLDGRAIRVNVAE 357
+ GR +R++ +
Sbjct: 296 STKTPYGRPLRIDYSH 311
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P IYVGNL ++V L+ FS+ G V R++YD G S+GFG+V A
Sbjct: 139 PKSTIYVGNLFFDVTAGDLKNEFSKCGPVEGVRLLYDYR-GVSKGFGYVKFHDVETAEKA 197
Query: 338 IAALDGQNLDGRAIRVNVA 356
+A + GQ +GR + VN A
Sbjct: 198 VALMHGQLFEGRHLAVNFA 216
>gi|409045875|gb|EKM55355.1| hypothetical protein PHACADRAFT_255926 [Phanerochaete carnosa
HHB-10118-sp]
Length = 672
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 38/211 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NL +V E+ LFE+ G V A VI
Sbjct: 232 IYVKNLDPEVSLEEFTQLFEQFGNVTSA---------------------------VIQTD 264
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
E S+GFGFV EEA+ AV+ H + +GR L V++A + + E + +E
Sbjct: 265 EEGNSKGFGFVNFEFHEEAQNAVDGLHDTEYNGRKLFVSRAQKKAEREEELRKSYEHAKM 324
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +Y+ NL E+D+ RL F G + +A+V+ D E G S+GFGFV SS
Sbjct: 325 EKMSKYQGVNLYIKNLDDEIDDERLRAEFEPFGTITSAKVMRD-EKGSSKGFGFVCFSSP 383
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
E A+A ++ + + + + V++A+ R+ R
Sbjct: 384 DEATKAVAEMNNKMIGAKPLYVSLAQRREVR 414
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 92/210 (43%), Gaps = 35/210 (16%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P A L+VG L V AMLFE F+M + V+ +
Sbjct: 45 PSPSASLYVGELDPTVSE---AMLFEI-------------------FNM----IGPVASI 78
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV 275
+V + T RS G+ +V + E+A+E + I GR A R +R P +
Sbjct: 79 RVCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSLIKGR-------ACRIMWSQRDPAL 131
Query: 276 FEPG-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
+ G I++ NL +DN L F+ G V++ +V D E GRS+G+GFV +
Sbjct: 132 RKTGQGNIFIKNLDEAIDNKALHDTFAAFGNVLSCKVATD-EQGRSKGYGFVHYETAEAA 190
Query: 335 NDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
AI A++G L+ + + V ++ R S
Sbjct: 191 ETAIKAVNGMLLNDKKVYVGHHISKKERQS 220
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%)
Query: 273 PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
P++ P +YVG L V A L ++F+ G V + RV D T RS G+ +V +
Sbjct: 42 PQLPSPSASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAA 101
Query: 333 ELNDAIAALDGQNLDGRAIRV 353
+ A+ L+ + GRA R+
Sbjct: 102 DGERALEQLNYSLIKGRACRI 122
>gi|326519747|dbj|BAK00246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 368
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 34/200 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DA +VGNL V E L LF +AG V V+ V
Sbjct: 23 QDATTYVGNLDPQVSEELLWELFVQAGPV--------------------VNVY------V 56
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+R T+ +G+GFV + E+A+ A+++ + + G+ + VNKA+ + + +
Sbjct: 57 PKDRVTNLHQGYGFVEFRSEEDADYAIKILNMLKLYGKPIRVNKAS-------QDKKSLD 109
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVV-NARVVYDRETGRSRGFGFVTMSSETELND 336
G +++GNL EVD L FS G +V N +++ D ETG SRGFGFV+ S +
Sbjct: 110 VGANLFIGNLDPEVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQ 169
Query: 337 AIAALDGQNLDGRAIRVNVA 356
AI A++ Q+L R I V+ A
Sbjct: 170 AIEAMNNQHLCNRPITVSYA 189
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 283 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 342
YVGNL +V L ++F + G VVN V DR T +G+GFV SE + + AI L+
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 343 GQNLDGRAIRVNVAEDRQR 361
L G+ IRVN A ++
Sbjct: 88 MLKLYGKPIRVNKASQDKK 106
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 25/112 (22%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF+GNL +VD + L F G + V+ +++
Sbjct: 112 ANLFIGNLDPEVDEKLLYDTFSAFGVI-------------------------VTNPKIMR 146
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+ ET SRGFGFV+ + E +++A+E + + R +TV+ A + T+ ER
Sbjct: 147 DPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKGER 198
>gi|212546733|ref|XP_002153520.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
gi|210065040|gb|EEA19135.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
Length = 472
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 40/211 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LF+GNL +++D E L FE FG +S ++++ R
Sbjct: 226 LFIGNLSWNIDEEWLRREFES--------------FGE------------LSGVRIMTER 259
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR------- 274
ET RSRGFG+V + A+ A E ++DGR + ++ A PR + APR
Sbjct: 260 ETGRSRGFGYVEYADAASAKAAYEAKKDTELDGRTINLDYAKPRDANAQ-APREKAQTRA 318
Query: 275 ------VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
+++GNL + VD + +VF G + R+ D ETGR +G+G+V
Sbjct: 319 RSFGDQTSPESNTLFLGNLVFGVDENAVREVFESQGTIQGIRLPTDPETGRPKGYGYVEF 378
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
SS E A+ L G ++ GRAIR++ + R
Sbjct: 379 SSVDEARQALNDLQGTDIGGRAIRLDFSTPR 409
>gi|70983602|ref|XP_747328.1| nucleic acid-binding protein [Aspergillus fumigatus Af293]
gi|66844954|gb|EAL85290.1| nucleic acid-binding protein [Aspergillus fumigatus Af293]
gi|159123666|gb|EDP48785.1| nucleic acid-binding protein [Aspergillus fumigatus A1163]
Length = 324
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 96/212 (45%), Gaps = 36/212 (16%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
EE + P + ++VGNL YDV +E L ++ G VE + + N+G
Sbjct: 137 EENLRPRQ--TVYVGNLFYDVTAEDLKNHMQQFGVVE----RVDLITDNRGL-------- 182
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE 270
SRGF +V ++E A+ VE H +GR +T A+ GT+P
Sbjct: 183 ---------------SRGFAYVHFDSIEAAKSCVEAMHLQIFEGRRITAQYASSGGTRPL 227
Query: 271 RAPRVFEPGFR-IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
R P R +Y+GNL +E+ + L ++F + V++ RV DR TG+ RGF
Sbjct: 228 R------PASRTLYLGNLSFEMTDRDLNELFRDINNVIDVRVSVDRRTGQPRGFAHAEFL 281
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
A L G+ GR IRV+ + +R
Sbjct: 282 DVESAQKAFEILSGKAPYGRRIRVDYSSTNRR 313
>gi|298528161|ref|ZP_07015565.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511813|gb|EFI35715.1| RNP-1 like RNA-binding protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 84
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVGNLPW A+L +F+E+G+V +A+++ DRETGRSRGFGFV M E ++AI +L
Sbjct: 4 LYVGNLPWSTTEAQLRDLFAEYGEVSSAKIIEDRETGRSRGFGFVEM--ENGADEAIESL 61
Query: 342 DGQNLDGRAIRVNVAEDRQ 360
+G + GR I+VNVA+ ++
Sbjct: 62 NGTDFGGRNIKVNVAKPKR 80
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 28/104 (26%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
L+VGNLP+ +L LF + G V A ++I +R
Sbjct: 4 LYVGNLPWSTTEAQLRDLFAEYGEVSSA--------------------------KIIEDR 37
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET RSRGFGFV M A++A+E + D GR + VN A P+
Sbjct: 38 ETGRSRGFGFVEMEN--GADEAIESLNGTDFGGRNIKVNVAKPK 79
>gi|303323779|ref|XP_003071881.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240111583|gb|EER29736.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320031835|gb|EFW13793.1| nucleic acid-binding protein [Coccidioides posadasii str. Silveira]
Length = 334
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 87/196 (44%), Gaps = 27/196 (13%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNL +DV + L F K G VE L+ +G
Sbjct: 143 IYVGNLFFDVTAGDLKNEFSKCGPVE----GVRLLYDYRGV------------------- 179
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
S+GFG+V VE AEKAV + H +GR L VN A +P P
Sbjct: 180 ----SKGFGYVKFHDVETAEKAVALMHGQLFEGRHLAVNFARVELDKPMNHDPTKPPTRT 235
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+Y+GN+P+E+ + L ++F + +++ RV DR TGR+RGF + A L
Sbjct: 236 LYIGNIPFEMTDRDLNELFKDVDNIIDVRVAVDRRTGRARGFVHADFTDIESARKAFTLL 295
Query: 342 DGQNLDGRAIRVNVAE 357
+ GR +R++ +
Sbjct: 296 STKTPYGRPLRIDYSH 311
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P IYVGNL ++V L+ FS+ G V R++YD G S+GFG+V A
Sbjct: 139 PKSTIYVGNLFFDVTAGDLKNEFSKCGPVEGVRLLYDYR-GVSKGFGYVKFHDVETAEKA 197
Query: 338 IAALDGQNLDGRAIRVNVAE 357
+A + GQ +GR + VN A
Sbjct: 198 VALMHGQLFEGRHLAVNFAR 217
>gi|227206222|dbj|BAH57166.1| AT2G21660 [Arabidopsis thaliana]
Length = 99
Score = 85.1 bits (209), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 53/72 (73%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LE F+++G V++++++ DRETGRSRGFGFVT E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 340 ALDGQNLDGRAI 351
++GQ+LDGR+I
Sbjct: 68 GMNGQDLDGRSI 79
Score = 42.4 bits (98), Expect = 0.37, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 258
++I +RET RSRGFGFVT + + A+E + D+DGR +T
Sbjct: 38 KIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSIT 80
>gi|302809382|ref|XP_002986384.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
gi|300145920|gb|EFJ12593.1| hypothetical protein SELMODRAFT_49298 [Selaginella moellendorffii]
Length = 145
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W + LE FS +G V+ A+VV DR+T RSRGFGFVT E + DAI
Sbjct: 2 FRCFVGGLSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSMQDAID 61
Query: 340 ALDGQNLDGRAIRVNVAE 357
+ G++LDGR+I V+ A+
Sbjct: 62 GMHGKDLDGRSITVSKAQ 79
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+V+ +R+T+RSRGFGFVT + A++ H D+DGR +TV+KA P+
Sbjct: 32 KVVLDRDTERSRGFGFVTFGDENSMQDAIDGMHGKDLDGRSITVSKAQPK 81
>gi|348529271|ref|XP_003452137.1| PREDICTED: polyadenylate-binding protein 1-like [Oreochromis
niloticus]
Length = 635
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 39/213 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+++ N D+D EKL LF K G +L +
Sbjct: 193 VYIKNFGEDMDDEKLKELFSKYGP---------------------------ALSIRVMTD 225
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
E+ +S+GFGFV+ E+A+KAV+ + +++GR + V +A +G + R FE
Sbjct: 226 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQ 285
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL +D+ RL + FS G + +A+V+ E GRS+GFGFV SS
Sbjct: 286 DRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSP 343
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 344 EEATKAVTEMNGRIVATKPLYVALAQRKEERQA 376
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 41/209 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+F+ NL +D++ L F G + +V VC
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKV--------------VC-------------- 132
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
+ + S+G+GFV T E AE+A+E + ++ R + V G R R E G R
Sbjct: 133 DENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFV------GRFKSRKEREAELGAR 186
Query: 282 ------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
+Y+ N ++D+ +L+++FS++G ++ RV+ D E+G+S+GFGFV+ +
Sbjct: 187 AREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTD-ESGKSKGFGFVSFERHEDAQ 245
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
A+ ++G+ L+GR + V A+ + R +
Sbjct: 246 KAVDEMNGKELNGRQVYVGRAQKKGERQN 274
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P +YVG+L +V A L + FS G +++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 338 IAALDGQNLD---GRAIRV 353
ALD N D GR +R+
Sbjct: 66 ERALDTMNFDVIKGRPLRI 84
>gi|317036295|ref|XP_001398046.2| C6 transcription factor [Aspergillus niger CBS 513.88]
Length = 1095
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 31/208 (14%)
Query: 155 EPPEDAK-LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
EPP + +F+GN+ YDV E L EK G VE K + N+G
Sbjct: 904 EPPTPKETVFIGNVFYDVTREDLKKAMEKYGVVE----KVVLVLDNRGI----------- 948
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAP 273
S+G+G+V +++ A++AV+ + +GR +TV + A R
Sbjct: 949 ------------SKGYGYVQFDSIDAAQRAVDALNMRLFEGRRVTV-QFAQNNVYHRR-- 993
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
++ P +Y+GNLP+E+ + L ++F + VV+ RV DR TG++RGF S +
Sbjct: 994 QLNAPTRTLYIGNLPFEMTDRDLNELFKDVQNVVDIRVAVDRRTGQARGFAHAEFVSTSS 1053
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDRQR 361
A+A L+ + GR +R++ ++ R
Sbjct: 1054 AKAAMAILENKLPYGRRLRLDYSKATSR 1081
>gi|357140379|ref|XP_003571746.1| PREDICTED: uncharacterized protein LOC100831046 isoform 1
[Brachypodium distachyon]
Length = 403
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 93/202 (46%), Gaps = 33/202 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
K+FVG + ++ E + F K G + + ++
Sbjct: 65 GKIFVGGVAWETTEETFSKHFGKYGAITDS--------------------------VIMK 98
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEP 278
++ T RGFGFVT S +K +E H +IDGR + V + PR + P+
Sbjct: 99 DKHTKMPRGFGFVTFSDPSVIDKVLEDEH--NIDGRTVEVKRTVPREEMSSKDGPKTR-- 154
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+I+VG LP + L FS +GKVV +++ D TGRSRGFGFVT SE + I
Sbjct: 155 --KIFVGGLPASLSEDDLRDHFSSYGKVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVI 212
Query: 339 AALDGQNLDGRAIRVNVAEDRQ 360
+ ++L G+ + + AE ++
Sbjct: 213 SEGRMRDLGGKQVEIKKAEPKK 234
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+I+VG + WE + F ++G + ++ ++ D+ T RGFGFVT S + ++ +
Sbjct: 66 KIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE- 124
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSS 364
D N+DGR + V R+ SS
Sbjct: 125 -DEHNIDGRTVEVKRTVPREEMSS 147
>gi|440899695|gb|ELR50961.1| Polyadenylate-binding protein 1-like protein, partial [Bos
grunniens mutus]
Length = 618
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 41/214 (19%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E ++V NL DVD ++L LF + G +L V
Sbjct: 189 EFTNIYVKNLHVDVDEQRLQDLFSQFG----------------------------KMLSV 220
Query: 218 IYNRE-TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
R+ + SRGFGFV EEA+KAV + ++ GRLL V +A R + R F
Sbjct: 221 KVMRDVSGHSRGFGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGRAQKRVERQNELKRRF 280
Query: 277 E----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
E G +YV NL +D+ +L + FS +G + +A+V+ E G S+GFGFV
Sbjct: 281 EQMKQDRLTRYQGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAKVM--TEGGHSKGFGFV 338
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
SS E A+ ++G+ + + + V +AE R+
Sbjct: 339 CFSSPEEATKAVTEMNGRIVGTKPLYVALAEGRK 372
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 75/145 (51%), Gaps = 13/145 (8%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR---- 281
SRGFGFV T E A+ A+ + ++ R + V G R R E G R
Sbjct: 137 SRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFV------GHFKSRREREVELGARAMEF 190
Query: 282 --IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
IYV NL +VD RL+ +FS+ GK+++ +V+ D +G SRGFGFV E A+
Sbjct: 191 TNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRD-VSGHSRGFGFVNFEKHEEAQKAVV 249
Query: 340 ALDGQNLDGRAIRVNVAEDRQRRSS 364
++G+ + GR + V A+ R R +
Sbjct: 250 NMNGREVSGRLLYVGRAQKRVERQN 274
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 278 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
PG+ +YVG+L +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 335 NDAIAALDGQNLDGRAIRV 353
A+ ++ + + G+ IR+
Sbjct: 66 ERALDTMNFEVIKGQPIRI 84
>gi|255550690|ref|XP_002516394.1| spliceosome associated protein, putative [Ricinus communis]
gi|223544492|gb|EEF46011.1| spliceosome associated protein, putative [Ricinus communis]
Length = 376
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 34/200 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DA +VGNL V E L LF +AG V V+ V
Sbjct: 23 QDATAYVGNLDPQVSEELLWELFVQAGPV--------------------VNVY------V 56
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+R T+ +G+GFV + E+A+ A+++ + + G+ + VNKA+ + + +
Sbjct: 57 PKDRVTNLHQGYGFVEFRSEEDADYAIKIMNMIKLFGKPIRVNKAS-------QDKKSLD 109
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVV-NARVVYDRETGRSRGFGFVTMSSETELND 336
G +++GNL +VD L FS G +V N +++ D ETG SRGFGF++ S +
Sbjct: 110 VGANLFIGNLDPDVDEKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFDASDA 169
Query: 337 AIAALDGQNLDGRAIRVNVA 356
AI A++GQ L R I V+ A
Sbjct: 170 AIEAMNGQYLCNRQITVSYA 189
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 283 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 342
YVGNL +V L ++F + G VVN V DR T +G+GFV SE + + AI ++
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKIMN 87
Query: 343 GQNLDGRAIRVNVAEDRQR 361
L G+ IRVN A ++
Sbjct: 88 MIKLFGKPIRVNKASQDKK 106
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF+GNL DVD + L F G + V+ +++
Sbjct: 112 ANLFIGNLDPDVDEKLLHDTFSAFGVI-------------------------VTNPKIMR 146
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+ ET SRGFGF++ + + ++ A+E + + R +TV+ A + T+ ER
Sbjct: 147 DPETGNSRGFGFISYDSFDASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
>gi|220905189|ref|YP_002480501.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869488|gb|ACL49823.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 88
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNLPW + +FS HG ++ +++ DRETGR+RGFGFV M + E +AI+AL
Sbjct: 5 IYVGNLPWSATEDAVRDLFSAHGDPISVKLISDRETGRARGFGFVEMEDD-EAQNAISAL 63
Query: 342 DGQNLDGRAIRVNVAEDRQ 360
+G + GRA+RVN AE+R+
Sbjct: 64 NGMDFGGRALRVNKAEERR 82
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 50/110 (45%), Gaps = 27/110 (24%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNLP+ + + LF G +S+ ++I +R
Sbjct: 5 IYVGNLPWSATEDAVRDLFSAHGDP-------------------------ISV-KLISDR 38
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
ET R+RGFGFV M +EA+ A+ + D GR L VNKA R P R
Sbjct: 39 ETGRARGFGFVEMED-DEAQNAISALNGMDFGGRALRVNKAEERRPAPRR 87
>gi|302506947|ref|XP_003015430.1| nucleic acid-binding protein [Arthroderma benhamiae CBS 112371]
gi|291179002|gb|EFE34790.1| nucleic acid-binding protein [Arthroderma benhamiae CBS 112371]
Length = 293
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 99/212 (46%), Gaps = 38/212 (17%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
EP A ++VGN+ +D+ + L K G V + ++ ++G
Sbjct: 77 EPQPKATVYVGNILFDITAADLKEYASKYGKV----LGTRIIYDSRGL------------ 120
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERA 272
SRGFG+V +VEEA+KA++ H + +GR L+VN A R QP+R
Sbjct: 121 -----------SRGFGYVRFESVEEAKKAIDEMHLSEYEGRKLSVNFAQVDLRDEQPQRK 169
Query: 273 PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
EP I+VGN+ +V + L +F + V + RV DR TG RGF T
Sbjct: 170 ---MEPTRTIFVGNIAHQVTDRDLHALFDDIPNVFDVRVAVDRRTGMPRGFAHAEF---T 223
Query: 333 ELNDAIAA---LDGQNLDGRAIRVNVAEDRQR 361
++ AIA L GQ GR +R++ + +R
Sbjct: 224 DVESAIAGFEMLKGQAPYGRPLRLDYSHSARR 255
>gi|326472099|gb|EGD96108.1| RNA binding domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 293
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 99/212 (46%), Gaps = 38/212 (17%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
EP A ++VGN+ +D+ + L K G V + ++ ++G
Sbjct: 77 EPQPKATVYVGNILFDITAADLKEYASKYGKV----LGTRIIYDSRGL------------ 120
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERA 272
SRGFG+V +VEEA+KA++ H + +GR L+VN A R QP+R
Sbjct: 121 -----------SRGFGYVRFESVEEAKKAIDEMHLSEYEGRKLSVNFAQVDLRDEQPQRK 169
Query: 273 PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
EP I+VGN+ +V + L +F + V + RV DR TG RGF T
Sbjct: 170 ---MEPTRTIFVGNIAHQVTDRDLHALFDDIPNVFDVRVAVDRRTGMPRGFAHAEF---T 223
Query: 333 ELNDAIAA---LDGQNLDGRAIRVNVAEDRQR 361
++ AIA L GQ GR +R++ + +R
Sbjct: 224 DVESAIAGFEMLKGQAPYGRPLRLDYSHSARR 255
>gi|173421|gb|AAA35320.1| poly(A)-binding protein, partial [Schizosaccharomyces pombe]
Length = 628
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 100/188 (53%), Gaps = 21/188 (11%)
Query: 187 EIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 246
EI E +F LFG G + +SL++ + D+ RGFGFV + E A+KAV+
Sbjct: 257 EITEQEFSDLFGQFG------EITSLSLVK----DQNDKPRGFGFVNYANHECAQKAVDE 306
Query: 247 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNARL 296
+ + G+ L V +A + + E + +E G +++ NL EVD+ RL
Sbjct: 307 LNDKEYKGKKLYVGRAQKKHEREEELRKAYEQMKLEKMNKYQGVNLFIKNLQDEVDDERL 366
Query: 297 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
+ FS G + +A+++ D E G+S+GFGFV ++ E N A+ ++ + L G+ + V +A
Sbjct: 367 KAEFSAFGTITSAKIMTD-EQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALA 425
Query: 357 EDRQRRSS 364
+ ++ R S
Sbjct: 426 QRKEVRRS 433
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 35/209 (16%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P A L+VG L V AMLFE LF + G V+ ++
Sbjct: 63 PTSASLYVGELDPSVTE---AMLFE--------------LFNSIG---------PVASIR 96
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
V + T RS G+ +V +E+ EKA++ + I GR R +R P +
Sbjct: 97 VCRDAVTRRSLGYAYVNFHNMEDGEKALDELNYTLIKGRPC-------RIMWSQRDPSLR 149
Query: 277 EPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
+ G +++ NL +DN L FS GK+++ +V D E G ++G+GFV S N
Sbjct: 150 KMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVD-ELGNAKGYGFVHFDSVESAN 208
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
AI ++G L+ + + V R+ R S
Sbjct: 209 AAIEHVNGMLLNDKKVYVGHHVSRRERQS 237
>gi|357146461|ref|XP_003574000.1| PREDICTED: splicing factor 3B subunit 4-like [Brachypodium
distachyon]
Length = 359
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 99/200 (49%), Gaps = 34/200 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DA +VGNL V E L LF +AG V V+ V
Sbjct: 23 QDATTYVGNLDPQVSEELLWELFVQAGPV--------------------VNVY------V 56
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+R T+ +G+GFV + E+A+ A+++ + + G+ + VNKA+ + + +
Sbjct: 57 PKDRVTNLHQGYGFVEFRSEEDADYAIKILNMLKLYGKPIRVNKAS-------QDKKSLD 109
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVV-NARVVYDRETGRSRGFGFVTMSSETELND 336
G +++GNL EVD L FS G +V N +++ D ETG SRGFGFV+ S +
Sbjct: 110 VGANLFIGNLDPEVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQ 169
Query: 337 AIAALDGQNLDGRAIRVNVA 356
AI A++ Q+L R I V+ A
Sbjct: 170 AIEAMNNQHLCNRPITVSYA 189
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 283 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 342
YVGNL +V L ++F + G VVN V DR T +G+GFV SE + + AI L+
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 343 GQNLDGRAIRVNVAEDRQR 361
L G+ IRVN A ++
Sbjct: 88 MLKLYGKPIRVNKASQDKK 106
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 25/112 (22%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF+GNL +VD + L F G + V+ +++
Sbjct: 112 ANLFIGNLDPEVDEKLLYDTFSAFGVI-------------------------VTNPKIMR 146
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+ ET SRGFGFV+ + E +++A+E + + R +TV+ A + T+ ER
Sbjct: 147 DPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKGER 198
>gi|171687819|ref|XP_001908850.1| hypothetical protein [Podospora anserina S mat+]
gi|170943871|emb|CAP69523.1| unnamed protein product [Podospora anserina S mat+]
Length = 459
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 82/153 (53%), Gaps = 9/153 (5%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ------- 268
+V+ ++E+ RSRGFG++ T E AEKA + D+ GR + ++ AA
Sbjct: 244 RVVSDKESGRSRGFGYIDFDTHENAEKAFNAKNGGDLQGREMRLDFAAKPAAAPQDRAAA 303
Query: 269 --PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
+ V P ++VGNLP+ D + F+E KV + R+ D E+GR +GF +V
Sbjct: 304 RASKHGDVVSPPSDTLFVGNLPFSADEDGVSAFFNEVAKVQSLRIPTDMESGRPKGFAYV 363
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
+ S + +A L+G ++DGR +R++ A+ R
Sbjct: 364 SFYSIDDAKNAFEQLNGADIDGRPVRLDFAKPR 396
>gi|239818248|ref|YP_002947158.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
gi|239804825|gb|ACS21892.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
Length = 181
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 58/84 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V ++ LEQ F + G V +A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR++ VN A + R
Sbjct: 62 NGMNGQPLGGRSVVVNEARPMEAR 85
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 26/112 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 4 KLYVGNLPYSVRDSDLEQAFGQFGAVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 272
R+T RS+GFGFV M + EA+ A+ + + GR + VN+A P +P R+
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSVVVNEARPMEARPPRS 89
>gi|255089439|ref|XP_002506641.1| predicted protein [Micromonas sp. RCC299]
gi|226521914|gb|ACO67899.1| predicted protein [Micromonas sp. RCC299]
Length = 285
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 31/202 (15%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+ + +VGNL ++ + E L + GTV AEV
Sbjct: 107 DGCRCYVGNLAWETNEESLIAHCSQVGTVVQAEVA------------------------- 141
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+ RS+G+G V T + A A+ H D+ GR + V G P
Sbjct: 142 --KQPGGRSKGWGLVDFETPDAANSAINTLHNSDLQGRSIIVRLERAGGANKSGGPNAGR 199
Query: 278 P----GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
P G +I V NLPW + L QVF + G V+ A V +TGRS+G+G V + +
Sbjct: 200 PEASSGLQIVVRNLPWSTTSEDLRQVFQQVGTVIKAEAVCHADTGRSKGWGTVLFETREQ 259
Query: 334 LNDAIAALDGQNLDGRAIRVNV 355
AI +G L+ R +++ +
Sbjct: 260 AQAAIQGFNGVELEHRPMQIKL 281
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 95/212 (44%), Gaps = 38/212 (17%)
Query: 153 FVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYV 212
E P + +L+VGN+P+ ++L +F GT+ + ++ G QG
Sbjct: 1 MAEGPTN-RLYVGNIPWSTTVDELRGIFSGCGTITLVDIPT----GRQG----------- 44
Query: 213 SLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV------NKAAPRG 266
RSRG+G V S V EA+ A++ + + R +TV K+AP
Sbjct: 45 ------------RSRGYGIVEYSNVNEAQVAIQTLDGHTLGDRNITVREDKAPTKSAPSK 92
Query: 267 TQPERAPRVFEP---GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGF 323
+ R+ P G R YVGNL WE + L S+ G VV A V + GRS+G+
Sbjct: 93 SGGNRSTIGDTPAADGCRCYVGNLAWETNEESLIAHCSQVGTVVQAEVA-KQPGGRSKGW 151
Query: 324 GFVTMSSETELNDAIAALDGQNLDGRAIRVNV 355
G V + N AI L +L GR+I V +
Sbjct: 152 GLVDFETPDAANSAINTLHNSDLQGRSIIVRL 183
>gi|414079549|ref|YP_007000973.1| glycine-rich RNA-binding protein [Anabaena sp. 90]
gi|413972828|gb|AFW96916.1| glycine-rich RNA-binding protein [Anabaena sp. 90]
Length = 99
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 57/79 (72%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNL ++V L++VF+E+G V A++ DRETGR RGFGFV MSS+ E AIAAL
Sbjct: 3 IYVGNLSYQVAEEDLKRVFAEYGTVKKAQLPIDRETGRVRGFGFVEMSSDAEEQAAIAAL 62
Query: 342 DGQNLDGRAIRVNVAEDRQ 360
DG GR+++VN A+ R+
Sbjct: 63 DGSEWMGRSLKVNKAKPRE 81
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 48/104 (46%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNL Y V E L +F + GTV+ A Q+ +R
Sbjct: 3 IYVGNLSYQVAEEDLKRVFAEYGTVKKA--------------------------QLPIDR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET R RGFGFV MS+ E + A+ + GR L VNKA PR
Sbjct: 37 ETGRVRGFGFVEMSSDAEEQAAIAALDGSEWMGRSLKVNKAKPR 80
>gi|212722336|ref|NP_001132163.1| uncharacterized protein LOC100193584 [Zea mays]
gi|194693616|gb|ACF80892.1| unknown [Zea mays]
Length = 234
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 52/73 (71%)
Query: 285 GNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 344
G L W N LE F+ +G++++++V+ DRETGRSRGFGFVT SSE + DAI ++G+
Sbjct: 88 GGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGK 147
Query: 345 NLDGRAIRVNVAE 357
LDGR I VN A+
Sbjct: 148 ELDGRNITVNQAQ 160
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+VI +RET RSRGFGFVT S+ A+E + ++DGR +TVN+A
Sbjct: 113 KVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQA 159
>gi|351731832|ref|ZP_08949523.1| RNP-1 like RNA-binding protein [Acidovorax radicis N35]
Length = 177
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 58/84 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V ++ LEQ F + G V +A+V+ +R+TGRS+GFGFV M ++ E AI
Sbjct: 2 GNKLYVGNLPYSVRDSDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGNDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR+I VN A + R
Sbjct: 62 NGMNGQPLGGRSIVVNEARPMEPR 85
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 26/109 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 4 KLYVGNLPYSVRDSDLEQAFGQFGAVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
R+T RS+GFGFV M EA+ A+ + + GR + VN+A P +P
Sbjct: 38 RDTGRSKGFGFVEMGNDAEAQAAINGMNGQPLGGRSIVVNEARPMEPRP 86
>gi|67537390|ref|XP_662469.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|40741753|gb|EAA60943.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|259482272|tpe|CBF76595.1| TPA: nucleolin protein Nsr1, putative (AFU_orthologue;
AFUA_3G07710) [Aspergillus nidulans FGSC A4]
Length = 524
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 99/214 (46%), Gaps = 41/214 (19%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LFVGNL ++V E L FE+ G + +++
Sbjct: 277 ANLFVGNLSWNVTEEWLHQEFEQFGELSA---------------------------RIMT 309
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR------GTQPERA- 272
R+T RSRGFG+V + +A KA E ++IDGR + ++ A R G ERA
Sbjct: 310 ERDTGRSRGFGYVEFTNAADAAKAYEAMKEHEIDGRKINLDYATGRPANKDQGGFKERAQ 369
Query: 273 --PRVF-----EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 325
R F ++VGNLP+ + + +VF G V+ R+ D E+GR +GFG+
Sbjct: 370 NRARSFGDQTSPESDTLFVGNLPFSANEDSVHEVFGPQGNVLGIRLPTDMESGRPKGFGY 429
Query: 326 VTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
V SS E A L G +DGR IR++ + R
Sbjct: 430 VQYSSVDEARKAYNELQGAEIDGRPIRLDFSTPR 463
>gi|426402318|ref|YP_007021289.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|425858986|gb|AFY00022.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
Length = 104
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/79 (53%), Positives = 55/79 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G +IYVGNL + VD +L QVF+E G V V+ DRETGRS+GF FV MS+ETE AI
Sbjct: 2 GKKIYVGNLSFNVDQDQLNQVFAEFGTVDTVNVITDRETGRSKGFAFVEMSTETEARAAI 61
Query: 339 AALDGQNLDGRAIRVNVAE 357
L+G +L GRA+ ++ A+
Sbjct: 62 EKLNGMDLAGRAMNISEAK 80
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K++VGNL ++VD ++L +F + GTV+ + VI +
Sbjct: 4 KIYVGNLSFNVDQDQLNQVFAEFGTVDT--------------------------VNVITD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RS+GF FV MST EA A+E + D+ GR + +++A P+
Sbjct: 38 RETGRSKGFAFVEMSTETEARAAIEKLNGMDLAGRAMNISEAKPQ 82
>gi|160333518|ref|NP_001103836.1| poly A binding protein, cytoplasmic 5 [Rattus norvegicus]
gi|149055477|gb|EDM07061.1| rCG38154 [Rattus norvegicus]
Length = 382
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 39/210 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+FV N D+D EKL LF + G E +V
Sbjct: 201 VFVKNFGDDIDDEKLKKLFSEYGPTESVKV---------------------------IRD 233
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
T +S+GFGFV T E A+KAV H IDG++L V +A + + R FE
Sbjct: 234 ATGKSKGFGFVRYETHEAAQKAVLELHGKSIDGKVLCVGRAQKKIERLAELRRRFERLKL 293
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
PG IY+ NL +++ +L++ FS G + A+V+ E G+ +GFG V SS
Sbjct: 294 KDKTRPPGVPIYIKNLDETINDEKLKEEFSLFGSISRAKVMM--EVGQGKGFGVVCFSSF 351
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
E + A+ ++G+ + + + V + + R R
Sbjct: 352 EEASKAVNEMNGRVVGSKTLHVTLGQARHR 381
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 30/202 (14%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+F+ NL +D+ L LF G + +V VC
Sbjct: 108 IFIKNLDKSIDNRALFYLFSAFGNILSCKV--------------VC-------------- 139
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA-PRGTQPERAPRVFEPGF 280
+ + S+G+ +V ++ A +A+ + ++ R + V + P E R
Sbjct: 140 DDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFT 199
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++V N ++D+ +L+++FSE+G + +V+ D TG+S+GFGFV + A+
Sbjct: 200 NVFVKNFGDDIDDEKLKKLFSEYGPTESVKVIRD-ATGKSKGFGFVRYETHEAAQKAVLE 258
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
L G+++DG+ + V A+ + R
Sbjct: 259 LHGKSIDGKVLCVGRAQKKIER 280
>gi|162455692|ref|YP_001618059.1| RNA recognition motif-containing protein [Sorangium cellulosum So
ce56]
gi|161166274|emb|CAN97579.1| RNA-binding region RNP-1 (RNA recognition motif) [Sorangium
cellulosum So ce56]
Length = 139
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 56/81 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G R+YVGNLP+ A ++ F++ G+V + +V DRE+G+SRGFGFVTM + + AI
Sbjct: 2 GTRLYVGNLPFSATKASVQAAFAQSGEVTDVHIVTDRESGQSRGFGFVTMGTPEQAQQAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDR 359
++G +DGR +RVN AE+R
Sbjct: 62 ENMNGAMMDGRPLRVNEAEER 82
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+L+VGNLP+ + F ++G E+ +V ++ +
Sbjct: 4 RLYVGNLPFSATKASVQAAFAQSG--EVTDV------------------------HIVTD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RE+ +SRGFGFVTM T E+A++A+E + +DGR L VN+A R
Sbjct: 38 RESGQSRGFGFVTMGTPEQAQQAIENMNGAMMDGRPLRVNEAEER 82
>gi|222622445|gb|EEE56577.1| hypothetical protein OsJ_05928 [Oryza sativa Japonica Group]
Length = 510
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 33/202 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
K+FVG + ++ E + FEK G + + ++
Sbjct: 179 GKIFVGGVAWETTEESFSKHFEKYGAITDS--------------------------VIMK 212
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEP 278
++ T RGFGFVT S +K +E H IDGR + V + PR + P+
Sbjct: 213 DKHTKMPRGFGFVTFSDPSVIDKVLEDEHV--IDGRTVEVKRTVPREEMSSKDGPKTR-- 268
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+I+VG LP + L + FS +GK+V +++ D TGRSRGFGFVT SE + I
Sbjct: 269 --KIFVGGLPSSLTEDELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVI 326
Query: 339 AALDGQNLDGRAIRVNVAEDRQ 360
+ ++L G+ + + AE ++
Sbjct: 327 SEGRMRDLGGKQVEIKKAEPKK 348
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+I+VG + WE + F ++G + ++ ++ D+ T RGFGFVT S + ++ +
Sbjct: 180 KIFVGGVAWETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE- 238
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSS 364
D +DGR + V R+ SS
Sbjct: 239 -DEHVIDGRTVEVKRTVPREEMSS 261
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 26/117 (22%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCA 208
EE + P+ K+FVG LP + ++L F G +I E
Sbjct: 257 EEMSSKDGPKTRKIFVGGLPSSLTEDELREHFSPYG--KIVE------------------ 296
Query: 209 VFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
Q++ + T RSRGFGFVT + + E+ + D+ G+ + + KA P+
Sbjct: 297 ------HQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 347
>gi|195391065|ref|XP_002054186.1| GJ22934 [Drosophila virilis]
gi|194152272|gb|EDW67706.1| GJ22934 [Drosophila virilis]
Length = 355
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 36/229 (15%)
Query: 135 AGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFH 194
G + G +++ EP KLF+G L Y + L FEK G +
Sbjct: 2 GGHNDQNGNSNGQHDDDSITEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQI-------- 53
Query: 195 FLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMS---TVEEAEKAVEMFHRYD 251
V ++ V+ + T RSRGFGF+T S V+EA+KA +
Sbjct: 54 -----------------VDVV-VMKDPRTKRSRGFGFITYSHSSMVDEAQKARP----HK 91
Query: 252 IDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARV 311
IDGR++ +A PR Q +P +++VG L + D L F +G +V+ +
Sbjct: 92 IDGRVVEPKRAVPR--QDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGSIVDINI 149
Query: 312 VYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
V D+ETG+ RGF FV + D + L+G+ + V A +Q
Sbjct: 150 VMDKETGKKRGFAFVEFDDYDPV-DKVVLQKQHQLNGKMVDVKKALPKQ 197
>gi|41054151|ref|NP_956133.1| polyadenylate-binding protein 1-like [Danio rerio]
gi|27881953|gb|AAH44513.1| Zgc:55855 [Danio rerio]
gi|182890236|gb|AAI65470.1| Zgc:55855 protein [Danio rerio]
Length = 620
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 49/239 (20%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFL 196
ER+ E G + V E +++ N D+DSEKL +F + G
Sbjct: 178 EREAEMGAKAV----------EFTNVYIKNFGEDIDSEKLKNIFTEFGKT---------- 217
Query: 197 FGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRL 256
+ VC + E RSRGFGFV +A +AV + +++GR+
Sbjct: 218 -------LSVC----------VMTDERGRSRGFGFVNFVNHGDARRAVTEMNGKELNGRV 260
Query: 257 LTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKV 306
L V +A R + R FE G +YV NL +D+ +L + F+ +G +
Sbjct: 261 LYVGRAQKRLERQGELKRKFEQIKQERIQRYQGVNLYVKNLDDSIDDEKLRKEFAPYGTI 320
Query: 307 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
+A+V+ D G SRGFGFV SS E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 321 TSAKVMTD--GGHSRGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAI 377
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 13/143 (9%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR---- 281
S+G+GFV T E A +A+E + ++ R + V G R R E G +
Sbjct: 137 SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFV------GHFKSRKEREAEMGAKAVEF 190
Query: 282 --IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+Y+ N ++D+ +L+ +F+E GK ++ V+ D E GRSRGFGFV + + A+
Sbjct: 191 TNVYIKNFGEDIDSEKLKNIFTEFGKTLSVCVMTD-ERGRSRGFGFVNFVNHGDARRAVT 249
Query: 340 ALDGQNLDGRAIRVNVAEDRQRR 362
++G+ L+GR + V A+ R R
Sbjct: 250 EMNGKELNGRVLYVGRAQKRLER 272
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 36/206 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML++K F Q + VC VI
Sbjct: 11 ASLYVGDLHADVTE---AMLYQK------------FSPAGQIMSIRVCR-------DVI- 47
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
T RS G+ ++ +AE A++ + I GR + + +R P + + G
Sbjct: 48 ---TRRSLGYAYINFQQPADAECALDTMNYEVIKGRPIRI-------MWSQRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ N+ +DN L FS G +++ +VV D E G S+G+GFV ++ N AI
Sbjct: 98 VGNIFIKNMDESIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAANRAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRRSS 364
++G L+ R + V + R+ R +
Sbjct: 156 ETMNGMLLNDRKVFVGHFKSRKEREA 181
>gi|47217896|emb|CAG05018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 558
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 39/213 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+++ N D+D EKL LF K G +L +
Sbjct: 180 VYIKNFGEDMDDEKLKELFSKYGP---------------------------ALSIRVMTD 212
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
++ +S+GFGFV+ E+A+KAV+ + +++GR + V +A +G + R FE
Sbjct: 213 DSGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQ 272
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL +D+ RL + FS G + +A+V+ E GRS+GFGFV SS
Sbjct: 273 DRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSP 330
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 331 EEATKAVTEMNGRIVATKPLYVALAQRKEERQA 363
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 100/209 (47%), Gaps = 41/209 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+F+ NL +D++ L F G + +V VC
Sbjct: 88 IFIKNLDKSIDNKALYDTFSAFGNILSCKV--------------VC-------------- 119
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
+ + S+G+GFV T E AE+A+E + ++ R + V G R R E G R
Sbjct: 120 DENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFV------GRFKSRKEREAELGAR 173
Query: 282 ------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
+Y+ N ++D+ +L+++FS++G ++ RV+ D ++G+S+GFGFV+ +
Sbjct: 174 AREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTD-DSGKSKGFGFVSFERHEDAQ 232
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
A+ ++G+ L+GR + V A+ + R +
Sbjct: 233 KAVDDMNGKELNGRQVYVGRAQKKGERQN 261
>gi|398810631|ref|ZP_10569445.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
gi|398082488|gb|EJL73237.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
Length = 179
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + LEQ F + G V +A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR++ VN A + R
Sbjct: 62 NGMNGQPLGGRSVVVNEARPMEAR 85
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 4 KLYVGNLPYSVRDGDLEQAFGQFGAVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
R+T RS+GFGFV M + EA+ A+ + + GR + VN+A P +P
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSVVVNEARPMEARP 86
>gi|319796634|ref|YP_004158274.1| rnp-1 like RNA-binding protein [Variovorax paradoxus EPS]
gi|315599097|gb|ADU40163.1| RNP-1 like RNA-binding protein [Variovorax paradoxus EPS]
Length = 189
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 57/84 (67%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + LEQ F + G V +A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLPYSVRDGDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR++ VN A + R
Sbjct: 62 NGMNGQPLGGRSVVVNEARPMEAR 85
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 4 KLYVGNLPYSVRDGDLEQAFGQFGAVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
R+T RS+GFGFV M + EA+ A+ + + GR + VN+A P +P
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSVVVNEARPMEARP 86
>gi|302659529|ref|XP_003021453.1| nucleic acid-binding protein [Trichophyton verrucosum HKI 0517]
gi|291185354|gb|EFE40835.1| nucleic acid-binding protein [Trichophyton verrucosum HKI 0517]
Length = 293
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 99/212 (46%), Gaps = 38/212 (17%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
EP A ++VGN+ +D+ + L K G V + ++ ++G
Sbjct: 77 EPQPKATVYVGNILFDITAADLKEYASKYGKV----LGTRIIYDSRGL------------ 120
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERA 272
SRGFG+V +VEEA+KA++ H + +GR L+VN A R QP+R
Sbjct: 121 -----------SRGFGYVRFESVEEAKKAIDEMHLSEYEGRKLSVNFAQVDLRDEQPQRK 169
Query: 273 PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
EP I+VGN+ +V + L +F + V + RV DR TG RGF T
Sbjct: 170 ---MEPTRTIFVGNIAHQVTDRDLHALFDDIPNVFDVRVAVDRRTGMPRGFAHAEF---T 223
Query: 333 ELNDAIAA---LDGQNLDGRAIRVNVAEDRQR 361
++ AIA L GQ GR +R++ + +R
Sbjct: 224 DVESAIAGFEMLKGQAPYGRPLRLDYSHSARR 255
>gi|326319545|ref|YP_004237217.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323376381|gb|ADX48650.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 172
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 57/84 (67%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + LEQ F + G V +A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR+I VN A + R
Sbjct: 62 NGMNGQALGGRSIVVNEARPMEPR 85
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 4 KLYVGNLPYSVRDNDLEQAFGQFGAVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
R+T RS+GFGFV M + EA+ A+ + + GR + VN+A P +P
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAINGMNGQALGGRSIVVNEARPMEPRP 86
>gi|308081546|ref|NP_001183096.1| uncharacterized protein LOC100501457 [Zea mays]
gi|238009292|gb|ACR35681.1| unknown [Zea mays]
gi|414871228|tpg|DAA49785.1| TPA: hypothetical protein ZEAMMB73_160597 [Zea mays]
Length = 359
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 34/200 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DA +VGNL V E L LF +AG V V+ V
Sbjct: 23 QDATTYVGNLDPQVSEELLWELFVQAGPV--------------------VNVY------V 56
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+R T+ +G+GFV + E+A+ A+++ + + G+ + VNKA+ + + +
Sbjct: 57 PKDRVTNLHQGYGFVEFRSEEDADYAIKILNMIKLYGKPIRVNKAS-------QDKKSLD 109
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVV-NARVVYDRETGRSRGFGFVTMSSETELND 336
G +++GNL +VD L FS G +V N +++ D ETG SRGFGFV+ S +
Sbjct: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQ 169
Query: 337 AIAALDGQNLDGRAIRVNVA 356
AI A++ Q+L R I V+ A
Sbjct: 170 AIEAMNNQHLCNRPITVSYA 189
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 283 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 342
YVGNL +V L ++F + G VVN V DR T +G+GFV SE + + AI L+
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 343 GQNLDGRAIRVNVAEDRQR 361
L G+ IRVN A ++
Sbjct: 88 MIKLYGKPIRVNKASQDKK 106
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 25/112 (22%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF+GNL DVD + L F G + V+ +++
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVI-------------------------VTNPKIMR 146
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+ ET SRGFGFV+ + E +++A+E + + R +TV+ A + T+ ER
Sbjct: 147 DPETGNSRGFGFVSYESFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKGER 198
>gi|30692254|ref|NP_849523.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|332661645|gb|AEE87045.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 126
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 56/81 (69%)
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
E +R +VG L W ++ L++ FS+ G V++++++ DRE+GRSRGFGFVT E + D
Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRD 62
Query: 337 AIAALDGQNLDGRAIRVNVAE 357
AI ++G+ LDGR I VN A+
Sbjct: 63 AIEEMNGKELDGRVITVNEAQ 83
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + + E L F + G V + ++I +
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDS--------------------------KIIND 40
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RE+ RSRGFGFVT + A+E + ++DGR++TVN+A
Sbjct: 41 RESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEA 82
>gi|15235002|ref|NP_195637.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|544425|sp|Q03251.1|GRP8_ARATH RecName: Full=Glycine-rich RNA-binding protein 8; AltName:
Full=Protein CCR1
gi|16305|emb|CAA78712.1| glycine rich protein [Arabidopsis thaliana]
gi|166658|gb|AAA20201.1| ORF [Arabidopsis thaliana]
gi|166839|gb|AAA32854.1| RNA-binding protein [Arabidopsis thaliana]
gi|4914438|emb|CAB43641.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|7270909|emb|CAB80589.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|222423067|dbj|BAH19515.1| AT4G39260 [Arabidopsis thaliana]
gi|332661644|gb|AEE87044.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 169
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 56/81 (69%)
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
E +R +VG L W ++ L++ FS+ G V++++++ DRE+GRSRGFGFVT E + D
Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRD 62
Query: 337 AIAALDGQNLDGRAIRVNVAE 357
AI ++G+ LDGR I VN A+
Sbjct: 63 AIEEMNGKELDGRVITVNEAQ 83
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + + E L F + G V + ++I +
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDS--------------------------KIIND 40
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RE+ RSRGFGFVT + A+E + ++DGR++TVN+A
Sbjct: 41 RESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEA 82
>gi|351723185|ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
gi|255627057|gb|ACU13873.1| unknown [Glycine max]
Length = 143
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 60/79 (75%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G L + VD+ L+ FS G VV+A+V+ DR++GRSRGFGFV S++ + A++A
Sbjct: 37 KLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSNDESASSALSA 96
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG++L+GR+IRV+ A D+
Sbjct: 97 MDGKDLNGRSIRVSYANDK 115
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 26/111 (23%)
Query: 152 EFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFY 211
++ +KLF+G L Y VD + L F G V A
Sbjct: 28 NYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDA---------------------- 65
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+VI +R++ RSRGFGFV S E A A+ D++GR + V+ A
Sbjct: 66 ----KVITDRDSGRSRGFGFVNFSNDESASSALSAMDGKDLNGRSIRVSYA 112
>gi|156367097|ref|XP_001627256.1| predicted protein [Nematostella vectensis]
gi|156214160|gb|EDO35156.1| predicted protein [Nematostella vectensis]
Length = 86
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHG-KVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+R Y+GNL + VD LE+ F HG VV+ +V+ DRETGR RGFGFVT S+ E+ AI
Sbjct: 5 YRCYIGNLSYSVDEQALEEKF--HGCDVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAI 62
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
DGQ+ DGR ++VN A+ R R
Sbjct: 63 DEFDGQDFDGRPMKVNQAQPRGER 86
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 56/109 (51%), Gaps = 27/109 (24%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E+ + ++GNL Y VD + L E KFH C V V +V
Sbjct: 3 EEYRCYIGNLSYSVDEQAL-------------EEKFH-----------GCDVVDV---KV 35
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRG 266
I +RET R RGFGFVT + EE EKA++ F D DGR + VN+A PRG
Sbjct: 36 ITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDFDGRPMKVNQAQPRG 84
>gi|6715645|gb|AAF26472.1|AC007323_13 T25K16.8 [Arabidopsis thaliana]
Length = 679
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 44/218 (20%)
Query: 141 ESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQ 200
E ++ V + E V+ P +L+V N+P D +L +F+ GTV EV
Sbjct: 445 EPNKDSVVSKAEPVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEV--------- 495
Query: 201 GFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMF---------HRYD 251
V N +T SRG G+VTM ++ A+ A+ + +
Sbjct: 496 ----------------VSRNPQTGESRGSGYVTMGSINSAKIAIASLDGTVRARETKKQE 539
Query: 252 IDGRLLTVNKAAPRGTQPERAPRV----------FEPGFRIYVGNLPWEVDNARLEQVFS 301
+ GR + V + R P V +E ++YVGNLPW L FS
Sbjct: 540 VGGREMRVRYSVDMNPGTRRNPEVLNSTPKKILMYESQHKVYVGNLPWFTQPDGLRNHFS 599
Query: 302 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+ G +V+ RV++DR+TGR+R F F++ +S E + A++
Sbjct: 600 KFGTIVSTRVLHDRKTGRNRVFAFLSFTSGEERDAALS 637
>gi|37681851|gb|AAQ97803.1| poly(A)-binding protein, cytoplasmic 1 [Danio rerio]
Length = 620
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 49/239 (20%)
Query: 137 ERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFL 196
ER+ E G + V E +++ N D+DSEKL +F + G
Sbjct: 178 EREAEMGAKAV----------EFTNVYIKNFGEDIDSEKLKNIFTEFGKT---------- 217
Query: 197 FGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRL 256
+ VC + E RSRGFGFV +A +AV + +++GR+
Sbjct: 218 -------LSVC----------VMTDERGRSRGFGFVNFVNHGDARRAVTEMNGKELNGRV 260
Query: 257 LTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKV 306
L V +A R + R FE G +YV NL +D+ +L + F+ +G +
Sbjct: 261 LYVGRAQKRLERQGELKRKFEQIKQERIQRYQGVNLYVKNLDDSIDDEKLRKEFAPYGTI 320
Query: 307 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
+A+V+ D G SRGFGFV SS E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 321 TSAKVMTD--GGHSRGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAI 377
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 13/143 (9%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR---- 281
S+G+GFV T E A +A+E + ++ R + V G R R E G +
Sbjct: 137 SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFV------GHFKSRKEREAEMGAKAVEF 190
Query: 282 --IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+Y+ N ++D+ +L+ +F+E GK ++ V+ D E GRSRGFGFV + + A+
Sbjct: 191 TNVYIKNFGEDIDSEKLKNIFTEFGKTLSVCVMTD-ERGRSRGFGFVNFVNHGDARRAVT 249
Query: 340 ALDGQNLDGRAIRVNVAEDRQRR 362
++G+ L+GR + V A+ R R
Sbjct: 250 EMNGKELNGRVLYVGRAQKRLER 272
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 36/206 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML++K F Q + VC VI
Sbjct: 11 ASLYVGDLHADVTE---AMLYQK------------FSPAGQIMSIRVCR-------DVI- 47
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
T RS G+ ++ +AE A++ + I GR + + +R P + + G
Sbjct: 48 ---TRRSLGYAYINFQQPADAECALDTMNYEVIKGRPIRI-------MWSQRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ N+ +DN L FS G +++ +VV D E G S+G+GFV ++ N AI
Sbjct: 98 VGNIFIKNMDESIDNKALYDTFSAFGNILSCKVVCD-ENG-SKGYGFVHFETQEAANRAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRRSS 364
++G L+ R + V + R+ R +
Sbjct: 156 ETMNGMLLNDRKVFVGHFKSRKEREA 181
>gi|403290728|ref|XP_003936459.1| PREDICTED: polyadenylate-binding protein 1-like [Saimiri
boliviensis boliviensis]
Length = 614
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 41/215 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NLP DVD + L LF + G +L V R
Sbjct: 193 IYVKNLPADVDEQGLQDLFSQFG----------------------------KMLSVKVMR 224
Query: 222 ETD-RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE--- 277
++ RSR FGFV EEA+KAV + ++ GRLL ++A R + R FE
Sbjct: 225 DSSGRSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYASRAQKRVERQNELKRRFEQMK 284
Query: 278 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +YV NL +D+ +L + FS +G + +A+V+ E S+GFGFV SS
Sbjct: 285 QDRLSRYQGVNLYVKNLDDSIDDGKLRKEFSPYGVITSAKVM--TEGSHSKGFGFVCFSS 342
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 343 PEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 40/208 (19%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML+EK F G S+L +
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEK--------------FSPAG-----------SILSIRV 42
Query: 220 NRE--TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
R+ T RS G+ ++ +AE+A++ + + G+ + + + +R P + +
Sbjct: 43 CRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWS-------QRDPGLRK 95
Query: 278 PGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
G I++ NL +DN L FS G +++ +VV D E G SRGFGFV +
Sbjct: 96 SGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCD-EHG-SRGFGFVHFETYEAAQQ 153
Query: 337 AIAALDGQNLDGRAIRVNVAEDRQRRSS 364
AI ++G L+ R + V + R+ R++
Sbjct: 154 AINTMNGMLLNDRKVFVGHFKSRRERAA 181
>gi|120613408|ref|YP_973086.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120591872|gb|ABM35312.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 176
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 57/84 (67%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + LEQ F + G V +A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLPYSVRDNDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR+I VN A + R
Sbjct: 62 NGMNGQALGGRSIVVNEARPMEPR 85
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 26/109 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V L F + G V A +V+
Sbjct: 4 KLYVGNLPYSVRDNDLEQAFGQFGAVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
R+T RS+GFGFV M + EA+ A+ + + GR + VN+A P +P
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAINGMNGQALGGRSIVVNEARPMEPRP 86
>gi|327285428|ref|XP_003227435.1| PREDICTED: polyadenylate-binding protein 4-like [Anolis
carolinensis]
Length = 616
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 39/213 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+++ N D+D E+L LF K G +L +
Sbjct: 180 VYIKNFGDDMDDERLKELFGKYGK---------------------------TLSVKVMTD 212
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
T +S+GFGFV+ EEA KAVE + DI+G+++ V +A + + R FE
Sbjct: 213 PTGKSKGFGFVSFEKHEEANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQ 272
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +Y+ NL +D+ +L + FS G + +A+V+ E GRS+GFGFV SS
Sbjct: 273 ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EEGRSKGFGFVCFSSP 330
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 331 EEATKAVTEMNGRIVGSKPLYVALAQRKEERKA 363
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 81/145 (55%), Gaps = 13/145 (8%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR---- 281
S+G+ FV T + A++A+E + ++ R + V G R R E G +
Sbjct: 124 SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFV------GRFKSRKEREAELGAKAKEF 177
Query: 282 --IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+Y+ N ++D+ RL+++F ++GK ++ +V+ D TG+S+GFGFV+ E N A+
Sbjct: 178 TNVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEEANKAVE 236
Query: 340 ALDGQNLDGRAIRVNVAEDRQRRSS 364
++G++++G+ + V A+ + R +
Sbjct: 237 EMNGKDINGKMVFVGRAQKKVERQA 261
>gi|302693014|ref|XP_003036186.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
gi|300109882|gb|EFJ01284.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
Length = 632
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 84/156 (53%), Gaps = 11/156 (7%)
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
VI E RSRGFGFV T EEA+KAV+ + D GR L V++A + + E +
Sbjct: 257 VIQRDEEGRSRGFGFVNYETHEEAQKAVDNLNDKDFHGRKLFVSRAQKKAEREEELRKAH 316
Query: 277 E----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
E G +YV NL +VD+ +L F G + +A+V+ D + G S+GFGFV
Sbjct: 317 EQARLEKLSKYQGLNLYVKNLDDDVDDEKLRAEFEPFGTITSAKVMRD-DKGVSKGFGFV 375
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
SS E + A+A ++ + + + + V+ A+ R+ R
Sbjct: 376 CYSSPEEASKAVAEMNNKMIGSKPLYVSHAQRREVR 411
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 35/209 (16%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P A L+VG L V AMLFE F+M + V+ ++
Sbjct: 43 PPSASLYVGELDPTVTE---AMLFEI-------------------FNM----IGPVASIR 76
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
V + T RS G+ +V + E+A+E + I R + +R P +
Sbjct: 77 VCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSLIKNRPCRI-------MWSQRDPALR 129
Query: 277 EPG-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
+ G I++ NL ++DN L F+ G V++ +V D E G S+G+GFV +
Sbjct: 130 KTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATD-EHGNSKGYGFVHYETAEAAE 188
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
+AI ++G L+ + + V R+ R S
Sbjct: 189 NAIKNVNGMLLNDKKVYVGHHISRKERQS 217
>gi|241831489|ref|XP_002414860.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
gi|215509072|gb|EEC18525.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
Length = 686
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 38/213 (17%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+++ N ++D +KL ++FEK G + A+V
Sbjct: 194 VYIKNFGDELDDDKLLVIFEKYGKITSAKV---------------------------MTD 226
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
++ ++RGFGFV+ + AE+AVE + D+ GR L V +A + + R FE
Sbjct: 227 DSGKNRGFGFVSFEEPDSAERAVEELNGKDMGGRPLYVGRAQKKAERQSELKRHFEQLKQ 286
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL +D+ RL + F G + +A+V+ D GRS+GFGFV SS
Sbjct: 287 ERLNRYQGVNLYVKNLDDALDDERLRKEFGPFGNITSAKVMTD-ANGRSKGFGFVCFSSP 345
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 346 EEATKAVTEMNGRIVVSKPLYVALAQRKEDRKA 378
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 35/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L +V AMLFEK F G V ++V
Sbjct: 11 ASLYVGDLHPEVTE---AMLFEK--------------FSTAG---------PVLSIRVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ +V +AE+A++ + I + + + + +R P + + G
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDAIKNKPIRIMWS-------QRDPSLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN + FS G +++ RV D E S+G+GFV +E N AI
Sbjct: 98 VGNVFIKNLDKTIDNKAMYDTFSAFGNILSCRVATDEEAA-SKGYGFVHFETEEAANKAI 156
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
+ ++G L+ + + V R+ R
Sbjct: 157 SKVNGMLLNNKKVYVGKFIPRKER 180
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P +YVG+L EV A L + FS G V++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHPEVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 338 IAALDGQNLDG---RAIRV 353
ALD N D + IR+
Sbjct: 66 ERALDTMNFDAIKNKPIRI 84
>gi|327271804|ref|XP_003220677.1| PREDICTED: embryonic polyadenylate-binding protein-like [Anolis
carolinensis]
Length = 635
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 12/168 (7%)
Query: 208 AVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT 267
++F +L + RS+GFGFV ++A+KAVE + +I+GR+L V +A R
Sbjct: 212 SIFGKTLSVKVMTDNIGRSKGFGFVNFEKHQDAQKAVEDMNGKEINGRMLYVGRAQKRME 271
Query: 268 QPERAPRVFE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRET 317
+ R FE G +YV NL +D+ RL + FS +G + +A+V+ E
Sbjct: 272 RQSELKRKFEQIKQERVSRYQGVNLYVKNLDDGIDDERLRKEFSPYGTITSAKVM--TEG 329
Query: 318 GRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
G S+GFGFV SS E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 330 GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAI 377
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML+EK F G M + +V
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEK--------------FSPAGPIMSI---------RVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + I GR + + + +R P + + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++ +VV D E G SRG+GFV + N AI
Sbjct: 98 VGNIFIKNLDDSIDNKALYDTFSAFGNILSCKVVCD-ENG-SRGYGFVHFETHEAANRAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
A ++G L+ R + V + R+ R
Sbjct: 156 ATMNGMLLNDRKVFVGNFKSRRER 179
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 278 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
PG+ +YVG+L +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 335 NDAIAALDGQNLDGRAIRV 353
A+ ++ + + GR IR+
Sbjct: 66 ERALDTMNFEVIKGRPIRI 84
>gi|388855334|emb|CCF50998.1| related to NSR1-nuclear localization sequence binding protein
[Ustilago hordei]
Length = 452
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 102/209 (48%), Gaps = 31/209 (14%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E +++VG L ++VD++ L E G V A V+
Sbjct: 177 ETNQVWVGQLSWNVDNDWLKSEMEVFGQVTSARVQL------------------------ 212
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+R T +SRGFG+V +T A+KA E +DGR + ++ + P+G E + F
Sbjct: 213 --DRTTGKSRGFGYVDFATAAAAKKAFEEGQGKQVDGRAIRIDLSTPKGDVSEDRAKKFN 270
Query: 278 -----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
P +++GNL +++ + FSEHG+V R+ D ++GR +GFG+V +++
Sbjct: 271 DQRSAPSSTLFIGNLSFDITEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQE 330
Query: 333 ELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
AI A+ GQ L GR +R++ + R R
Sbjct: 331 SAAAAIDAMTGQELAGRPLRLDFSTPRDR 359
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W VDN L+ G+V +ARV DR TG+SRGFG+V ++ A
Sbjct: 180 QVWVGQLSWNVDNDWLKSEMEVFGQVTSARVQLDRTTGKSRGFGYVDFATAAAAKKAFEE 239
Query: 341 LDGQNLDGRAIRV-------NVAEDRQRR 362
G+ +DGRAIR+ +V+EDR ++
Sbjct: 240 GQGKQVDGRAIRIDLSTPKGDVSEDRAKK 268
>gi|356532261|ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 365
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 101/200 (50%), Gaps = 34/200 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DA +VGNL + E L LF +AG V +++V
Sbjct: 23 QDATAYVGNLDPQISEELLWELFVQAGPV---------------VNVYVPK--------- 58
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+R T++ +G+GFV + E+A+ A+++ + + G+ + VNKA+ + + +
Sbjct: 59 --DRVTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-------QDKKSLD 109
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVV-NARVVYDRETGRSRGFGFVTMSSETELND 336
G +++GNL +VD L FS G +V N +++ D +TG SRGFGF++ S +
Sbjct: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDS 169
Query: 337 AIAALDGQNLDGRAIRVNVA 356
AI A++GQ L R I V+ A
Sbjct: 170 AIEAMNGQYLCNRQITVSYA 189
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%)
Query: 283 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 342
YVGNL ++ L ++F + G VVN V DR T + +G+GFV SE + + AI L+
Sbjct: 28 YVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYAIKVLN 87
Query: 343 GQNLDGRAIRVNVAEDRQR 361
L G+ IRVN A ++
Sbjct: 88 MIKLYGKPIRVNKASQDKK 106
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF+GNL DVD + L F G + V+ +++
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVI-------------------------VTNPKIMR 146
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+ +T SRGFGF++ + E ++ A+E + + R +TV+ A + T+ ER
Sbjct: 147 DPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
>gi|356519124|ref|XP_003528224.1| PREDICTED: uncharacterized protein LOC100801928 [Glycine max]
Length = 656
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 59/82 (71%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P R+++G + + +D L ++ S++G+VV+AR++ DRETGR RGFGF+T S+ E + A
Sbjct: 40 PNSRLFIGGVSYSIDAQSLGEICSQYGQVVDARIIMDRETGRHRGFGFITYSNVDEASRA 99
Query: 338 IAALDGQNLDGRAIRVNVAEDR 359
+ ALDGQ+LDGR + V A +R
Sbjct: 100 LQALDGQDLDGRRVEVKFAIER 121
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 26/113 (23%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
VF+ + +++LF+G + Y +D++ L + + G V A
Sbjct: 29 VFQATRCMSNAPNSRLFIGGVSYSIDAQSLGEICSQYGQVVDA----------------- 71
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTV 259
++I +RET R RGFGF+T S V+EA +A++ D+DGR + V
Sbjct: 72 ---------RIIMDRETGRHRGFGFITYSNVDEASRALQALDGQDLDGRRVEV 115
>gi|325183203|emb|CCA17661.1| nucleolin putative [Albugo laibachii Nc14]
Length = 701
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 36/204 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E ++++ LP++ ++ FE GTVE H QG
Sbjct: 434 EKVEIYILGLPWEATEAQVRERFESCGTVE------HIDMQTQG---------------- 471
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
R G + S EAE A+E+ D GR L + A +PE F
Sbjct: 472 -----DGRPSGKARIRFSCASEAEAALEL-DGSDFGGRWLKIQLANEILEKPENCTTAF- 524
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
VGNLPW+ D+ + + FS+ G++ R++ DRETG RG G+V +S TE D
Sbjct: 525 ------VGNLPWDADDNSVCEFFSQCGEIGECRLLSDRETGEFRGIGYVEFTS-TEAADE 577
Query: 338 IAALDGQNLDGRAIRVNVAEDRQR 361
L+G + +GR++R+N A+ RQ+
Sbjct: 578 AIKLNGADFNGRSLRINYAKQRQQ 601
>gi|302814001|ref|XP_002988685.1| hypothetical protein SELMODRAFT_18499 [Selaginella moellendorffii]
gi|300143506|gb|EFJ10196.1| hypothetical protein SELMODRAFT_18499 [Selaginella moellendorffii]
Length = 135
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 52/78 (66%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
FR +VG L W + LE FS +G V+ A+VV DR+T RSRGFGFVT E + DAI
Sbjct: 8 FRCFVGGLSWATTDRNLEDAFSPYGTVIEAKVVLDRDTERSRGFGFVTFGDENSMQDAID 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
+ G++LDGR+I V+ A+
Sbjct: 68 GMHGKDLDGRSITVSKAQ 85
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+V+ +R+T+RSRGFGFVT + A++ H D+DGR +TV+KA P+
Sbjct: 38 KVVLDRDTERSRGFGFVTFGDENSMQDAIDGMHGKDLDGRSITVSKAQPK 87
>gi|357140381|ref|XP_003571747.1| PREDICTED: uncharacterized protein LOC100831046 isoform 2
[Brachypodium distachyon]
Length = 383
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 33/201 (16%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K+FVG + ++ E + F K G + + ++ +
Sbjct: 46 KIFVGGVAWETTEETFSKHFGKYGAITDS--------------------------VIMKD 79
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPG 279
+ T RGFGFVT S +K +E H +IDGR + V + PR + P+
Sbjct: 80 KHTKMPRGFGFVTFSDPSVIDKVLEDEH--NIDGRTVEVKRTVPREEMSSKDGPKTR--- 134
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+I+VG LP + L FS +GKVV +++ D TGRSRGFGFVT SE + I+
Sbjct: 135 -KIFVGGLPASLSEDDLRDHFSSYGKVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVIS 193
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
++L G+ + + AE ++
Sbjct: 194 EGRMRDLGGKQVEIKKAEPKK 214
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+I+VG + WE + F ++G + ++ ++ D+ T RGFGFVT S + ++ +
Sbjct: 46 KIFVGGVAWETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE- 104
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSS 364
D N+DGR + V R+ SS
Sbjct: 105 -DEHNIDGRTVEVKRTVPREEMSS 127
>gi|222612944|gb|EEE51076.1| hypothetical protein OsJ_31773 [Oryza sativa Japonica Group]
Length = 391
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 34/200 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DA +VGNL V E L LF +AG V V+ V
Sbjct: 23 QDATTYVGNLDPQVSEELLWELFVQAGPV--------------------VNVY------V 56
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+R T+ +G+GFV + E+A+ A+++ + + G+ + VNKA+ + + +
Sbjct: 57 PKDRVTNLHQGYGFVEFRSEEDADYAIKILNMIKLYGKPIRVNKAS-------QDKKSLD 109
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVV-NARVVYDRETGRSRGFGFVTMSSETELND 336
G +++GNL +VD L FS G +V N +++ D ETG SRGFGFV+ S +
Sbjct: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQ 169
Query: 337 AIAALDGQNLDGRAIRVNVA 356
AI A++ Q+L R I V+ A
Sbjct: 170 AIEAMNNQHLCNRPITVSYA 189
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 283 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 342
YVGNL +V L ++F + G VVN V DR T +G+GFV SE + + AI L+
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 343 GQNLDGRAIRVNVAEDRQR 361
L G+ IRVN A ++
Sbjct: 88 MIKLYGKPIRVNKASQDKK 106
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 28/134 (20%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF+GNL DVD + L F G + V+ +++
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVI-------------------------VTNPKIMR 146
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ ET SRGFGFV+ + E +++A+E + + R +TV+ A + T+ ER P
Sbjct: 147 DPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKGERH---GTPA 203
Query: 280 FRIYVGNLPWEVDN 293
R+ N P N
Sbjct: 204 ERLLAANNPGSQKN 217
>gi|195024447|ref|XP_001985876.1| GH21052 [Drosophila grimshawi]
gi|193901876|gb|EDW00743.1| GH21052 [Drosophila grimshawi]
Length = 645
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 87/158 (55%), Gaps = 12/158 (7%)
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERAPRVF 276
+ +++ +S+GFGFV T E AE AV+ + D+ +G+ L V +A + + + R F
Sbjct: 214 VMSKDDGKSKGFGFVAYETTEAAEAAVQALNGKDMGEGKTLYVARAQKKAERQQELKRKF 273
Query: 277 EP----------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
E G +YV NL +D+ RL + FS +G + +A+V+ D E GRS+GFGFV
Sbjct: 274 EELKKKRHESVFGVNLYVKNLDDSIDDERLRKEFSLYGTITSAKVMTDEE-GRSKGFGFV 332
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
S E A+ L+G+ + + + V +A+ ++ R +
Sbjct: 333 CFISPNEATCAVTELNGRVVGSKPLYVALAQRKEERKA 370
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 77/142 (54%), Gaps = 2/142 (1%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
E S+G+GFV T E A +++ + ++G+ + V K PR + + +
Sbjct: 125 EKGHSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTN 184
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+Y+ N E D+ +L++ F +GK+ + +V+ ++ G+S+GFGFV + A+ AL
Sbjct: 185 VYIKNFTDEFDDEKLKENFEPYGKITSYKVM-SKDDGKSKGFGFVAYETTEAAEAAVQAL 243
Query: 342 DGQNL-DGRAIRVNVAEDRQRR 362
+G+++ +G+ + V A+ + R
Sbjct: 244 NGKDMGEGKTLYVARAQKKAER 265
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 35/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L D++ L F AG V + VC V+
Sbjct: 2 ASLYVGDLHQDINEAGLFEKFSTAGPV---------------LSIRVCR-------DVV- 38
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
T RS G+ +V +AE+A++ + +D+ V R +R P + G
Sbjct: 39 ---TRRSLGYAYVNFQQPADAERALDTMN-FDL------VRNKPIRIMWSQRDPSLRRSG 88
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN + FS G +++ +V D E G S+G+GFV +E N +I
Sbjct: 89 VGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATD-EKGHSKGYGFVHFETEEAANTSI 147
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+G+ + V R+ R
Sbjct: 148 DKVNGMLLNGKKVYVGKFIPRKER 171
>gi|15228191|ref|NP_188259.1| poly(A) binding protein 6 [Arabidopsis thaliana]
gi|2062166|gb|AAB63640.1| poly(A)-binding protein isolog [Arabidopsis thaliana]
gi|9279720|dbj|BAB01277.1| poly(A) binding protein-like [Arabidopsis thaliana]
gi|332642284|gb|AEE75805.1| poly(A) binding protein 6 [Arabidopsis thaliana]
Length = 537
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 97/214 (45%), Gaps = 37/214 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+ ++V NL V + L LF + GTV V
Sbjct: 200 DSTNVYVKNLIETVTDDCLHTLFSQYGTVSSV---------------------------V 232
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF- 276
+ RSRGFGFV E A+KA+E + + L V KA + + E + F
Sbjct: 233 VMRDGMGRSRGFGFVNFCNPENAKKAMESLCGLQLGSKKLFVGKALKKDERREMLKQKFS 292
Query: 277 -----EPGFR---IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
+P R +YV NL ++ RL ++F +G++V+A+V+ E GRS+GFGFV
Sbjct: 293 DNFIAKPNMRWSNLYVKNLSESMNETRLREIFGCYGQIVSAKVMC-HENGRSKGFGFVCF 351
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
S+ E A L+G +DG+ I V VAE ++ R
Sbjct: 352 SNCEESKQAKRYLNGFLVDGKPIVVRVAERKEDR 385
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 3/150 (2%)
Query: 213 SLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 272
S+L E +S+GFGFV T + A A H + G+ L V K + + A
Sbjct: 137 SILSCKVVEENGQSKGFGFVQFDTEQSAVSARSALHGSMVYGKKLFVAKFINKDERAAMA 196
Query: 273 PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
+ +YV NL V + L +FS++G V + V+ D GRSRGFGFV +
Sbjct: 197 GN--QDSTNVYVKNLIETVTDDCLHTLFSQYGTVSSVVVMRD-GMGRSRGFGFVNFCNPE 253
Query: 333 ELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
A+ +L G L + + V A + R
Sbjct: 254 NAKKAMESLCGLQLGSKKLFVGKALKKDER 283
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 7/140 (5%)
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
+ + N T +S + ++ + A A+ + D+ G+ + + + R R R
Sbjct: 50 VHLCRNSVTGKSMCYAYINFDSPFSASNAMTRLNHSDLKGKAMRI-MWSQRDLAYRRRTR 108
Query: 275 VFEPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
GF +YV NL + ++ LE++F G +++ +VV E G+S+GFGFV +E
Sbjct: 109 T---GFANLYVKNLDSSITSSCLERMFCPFGSILSCKVV--EENGQSKGFGFVQFDTEQS 163
Query: 334 LNDAIAALDGQNLDGRAIRV 353
A +AL G + G+ + V
Sbjct: 164 AVSARSALHGSMVYGKKLFV 183
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 29/135 (21%)
Query: 151 EEFVEPPED--AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCA 208
+ F+ P + L+V NL ++ +L +F G + A+V H
Sbjct: 293 DNFIAKPNMRWSNLYVKNLSESMNETRLREIFGCYGQIVSAKVMCH-------------- 338
Query: 209 VFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ 268
E RS+GFGFV S EE+++A + + +DG+ + V A + +
Sbjct: 339 -------------ENGRSKGFGFVCFSNCEESKQAKRYLNGFLVDGKPIVVRVAERKEDR 385
Query: 269 PERAPRVFEPGFRIY 283
+R + F+ R Y
Sbjct: 386 IKRLQQYFQAQPRQY 400
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVG+L +V L FS + VV+ + + TG+S + ++ S ++A+ L
Sbjct: 23 LYVGDLSPDVTEKDLIDKFSLNVPVVSVHLCRNSVTGKSMCYAYINFDSPFSASNAMTRL 82
Query: 342 DGQNLDGRAIRV-----NVAEDRQRRSSF 365
+ +L G+A+R+ ++A R+ R+ F
Sbjct: 83 NHSDLKGKAMRIMWSQRDLAYRRRTRTGF 111
>gi|302762278|ref|XP_002964561.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
gi|302814304|ref|XP_002988836.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300143407|gb|EFJ10098.1| hypothetical protein SELMODRAFT_128832 [Selaginella moellendorffii]
gi|300168290|gb|EFJ34894.1| hypothetical protein SELMODRAFT_81392 [Selaginella moellendorffii]
Length = 149
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 53/80 (66%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G L W + L FS G+++ RV+ DRETGRSRGFGFV+ ++ E A+ A
Sbjct: 38 KLFIGGLAWGTEERGLRDAFSPFGEIIEVRVIQDRETGRSRGFGFVSYITDQEAQKAMEA 97
Query: 341 LDGQNLDGRAIRVNVAEDRQ 360
+DG+ LDGR IRVN A RQ
Sbjct: 98 MDGRVLDGRTIRVNYATQRQ 117
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 52/110 (47%), Gaps = 28/110 (25%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLF+G L + + L F G EI EV+ VI
Sbjct: 37 SKLFIGGLAWGTEERGLRDAFSPFG--EIIEVR------------------------VIQ 70
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
+RET RSRGFGFV+ T +EA+KA+E +DGR + VN A R QP
Sbjct: 71 DRETGRSRGFGFVSYITDQEAQKAMEAMDGRVLDGRTIRVNYATQR--QP 118
>gi|219847079|ref|YP_002461512.1| RNP-1 like RNA-binding protein [Chloroflexus aggregans DSM 9485]
gi|219541338|gb|ACL23076.1| RNP-1 like RNA-binding protein [Chloroflexus aggregans DSM 9485]
Length = 94
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VGNLPW V +A L +F HG+V +ARV+ DR+TGRSRGFGFV + + + I A
Sbjct: 4 KLFVGNLPWSVGDAELGAIFEPHGEVQSARVINDRDTGRSRGFGFVEIET-NNVAGVIRA 62
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSS 364
DG + GR +RVN AED+ R SS
Sbjct: 63 TDGLEIGGRNLRVNEAEDKPRSSS 86
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 46/103 (44%), Gaps = 27/103 (26%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
KLFVGNLP+ V +L +FE G V+ A +VI
Sbjct: 3 VKLFVGNLPWSVGDAELGAIFEPHGEVQSA--------------------------RVIN 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+R+T RSRGFGFV + T + +I GR L VN+A
Sbjct: 37 DRDTGRSRGFGFVEIET-NNVAGVIRATDGLEIGGRNLRVNEA 78
>gi|432907583|ref|XP_004077665.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 635
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 95/183 (51%), Gaps = 22/183 (12%)
Query: 192 KFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYD 251
K LFGN G + V + +T +S+GFGFV+ E+A+KAV+ + +
Sbjct: 206 KLKELFGNYGPALSV----------RVMTDDTGKSKGFGFVSFERHEDAQKAVDDMNGKE 255
Query: 252 IDGRLLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLEQVFS 301
++GR + V +A +G + R FE G +YV NL +D+ RL + FS
Sbjct: 256 LNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRKEFS 315
Query: 302 EHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
G + +A+V+ E GRS+GFGFV SS E A+ ++G+ + + + V +A+ ++
Sbjct: 316 PFGTITSAKVMM--EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEE 373
Query: 362 RSS 364
R +
Sbjct: 374 RQA 376
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 41/209 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+F+ NL +D++ L F G + +V VC
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKV--------------VC-------------- 132
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
+ + S+G+GFV T E AE+A+E + ++ R + V G R R E G R
Sbjct: 133 DENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFV------GRFKSRKEREAELGAR 186
Query: 282 ------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
+Y+ N ++D+ +L+++F +G ++ RV+ D +TG+S+GFGFV+ +
Sbjct: 187 AREFTNVYIKNFGEDMDDEKLKELFGNYGPALSVRVMTD-DTGKSKGFGFVSFERHEDAQ 245
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
A+ ++G+ L+GR + V A+ + R +
Sbjct: 246 KAVDDMNGKELNGRQVYVGRAQKKGERQN 274
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P +YVG+L +V A L + FS G +++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 338 IAALDGQNLD---GRAIRV 353
ALD N D GR +R+
Sbjct: 66 ERALDTMNFDVIKGRPLRI 84
>gi|302036839|ref|YP_003797161.1| RNA-binding protein [Candidatus Nitrospira defluvii]
gi|190343253|gb|ACE75641.1| RNA-binding protein [Candidatus Nitrospira defluvii]
gi|300604903|emb|CBK41236.1| RNA-binding protein [Candidatus Nitrospira defluvii]
Length = 107
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 57/82 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVG LP+ ++L +FS HG V +ARV+ D+ TG+SRGFGFV MS+ E AI
Sbjct: 2 GNKLYVGGLPYAATESQLSNLFSAHGTVESARVITDKFTGQSRGFGFVEMSTAEEAKAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQ 360
AL+G ++DGR + VN A+ ++
Sbjct: 62 TALNGSDMDGRQLTVNEAKPQE 83
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 55/105 (52%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VG LPY +L+ LF GTVE A +VI +
Sbjct: 4 KLYVGGLPYAATESQLSNLFSAHGTVESA--------------------------RVITD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+ T +SRGFGFV MST EEA+ A+ + D+DGR LTVN+A P+
Sbjct: 38 KFTGQSRGFGFVEMSTAEEAKAAITALNGSDMDGRQLTVNEAKPQ 82
>gi|256830132|ref|YP_003158860.1| RNP-1 like RNA-binding protein [Desulfomicrobium baculatum DSM
4028]
gi|256579308|gb|ACU90444.1| RNP-1 like RNA-binding protein [Desulfomicrobium baculatum DSM
4028]
Length = 89
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNLPW +E +F+ +G+V N +++ DRETGR+RGFGFV M S E +AIAAL
Sbjct: 5 IYVGNLPWSATEQDVETLFATYGQVANVKLISDRETGRARGFGFVEMESGAE--EAIAAL 62
Query: 342 DGQNLDGRAIRVNVA 356
DG + GR+++VN A
Sbjct: 63 DGADYGGRSLKVNEA 77
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 28/101 (27%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNLP+ + + LF G ++A VK +I +R
Sbjct: 5 IYVGNLPWSATEQDVETLFATYG--QVANVK------------------------LISDR 38
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
ET R+RGFGFV M + AE+A+ D GR L VN+A
Sbjct: 39 ETGRARGFGFVEMES--GAEEAIAALDGADYGGRSLKVNEA 77
>gi|19114289|ref|NP_593377.1| mRNA export shuttling protein [Schizosaccharomyces pombe 972h-]
gi|3123239|sp|P31209.2|PABP_SCHPO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|2104439|emb|CAB08762.1| mRNA export shuttling protein [Schizosaccharomyces pombe]
Length = 653
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 100/188 (53%), Gaps = 21/188 (11%)
Query: 187 EIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 246
EI E +F LFG G + +SL++ + D+ RGFGFV + E A+KAV+
Sbjct: 271 EITEQEFSDLFGQFG------EITSLSLVK----DQNDKPRGFGFVNYANHECAQKAVDE 320
Query: 247 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP----------GFRIYVGNLPWEVDNARL 296
+ + G+ L V +A + + E + +E G +++ NL EVD+ RL
Sbjct: 321 LNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERL 380
Query: 297 EQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVA 356
+ FS G + +A+++ D E G+S+GFGFV ++ E N A+ ++ + L G+ + V +A
Sbjct: 381 KAEFSAFGTITSAKIMTD-EQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALA 439
Query: 357 EDRQRRSS 364
+ ++ R S
Sbjct: 440 QRKEVRRS 447
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 35/209 (16%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P A L+VG L V AMLFE LF + G V+ ++
Sbjct: 77 PTSASLYVGELDPSVTE---AMLFE--------------LFNSIG---------PVASIR 110
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
V + T RS G+ +V +E+ EKA++ + I GR + +R P +
Sbjct: 111 VCRDAVTRRSLGYAYVNFHNMEDGEKALDELNYTLIKGRPCRI-------MWSQRDPSLR 163
Query: 277 EPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
+ G +++ NL +DN L FS GK+++ +V D E G ++G+GFV S N
Sbjct: 164 KMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVD-ELGNAKGYGFVHFDSVESAN 222
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
AI ++G L+ + + V R+ R S
Sbjct: 223 AAIEHVNGMLLNDKKVYVGHHVSRRERQS 251
>gi|425461447|ref|ZP_18840925.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
gi|389825682|emb|CCI24355.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9808]
Length = 97
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNLP+EVD + +VF E+GK+ + DRETG+ RGF FV M + E AIAAL
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEETKAIAAL 62
Query: 342 DGQNLDGRAIRVNVAEDRQRRSSF 365
DG GR ++VN A +++ +SSF
Sbjct: 63 DGAQWMGRELKVNQAREKEPKSSF 86
>gi|357124085|ref|XP_003563737.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform 1 [Brachypodium distachyon]
Length = 410
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 108/236 (45%), Gaps = 43/236 (18%)
Query: 128 GEDTVVEAGERQEESGEEGVFEEEEFVEPPEDA--KLFVGNLPYDVDSEKLAMLFEKAGT 185
G D VV + E GEEG ++ P D K+FVG + ++ E + F+K G
Sbjct: 57 GGDAVVNS----EAGGEEG----KDVAAEPADGSGKIFVGGVAWETTEETFSKHFQKYGA 108
Query: 186 VEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVE 245
+ + ++ ++ T RGFGFVT S ++ +E
Sbjct: 109 ITDS--------------------------VIMKDKHTKMPRGFGFVTFSDPSVIDRVLE 142
Query: 246 MFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHG 304
H IDGR + V + PR + P+ +I+VG +P + +L++ FS +G
Sbjct: 143 DEHT--IDGRTVEVKRTVPREEMSTKDGPKTR----KIFVGGIPTSLTEGKLKEHFSSYG 196
Query: 305 KVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
KV +++ D TGRSRGFGFVT SE + ++ +L G+ + + AE ++
Sbjct: 197 KVEEHQIMVDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIKRAEPKK 252
>gi|353227476|emb|CCA77984.1| related to mRNA polyadenylate-binding protein PAB1 [Piriformospora
indica DSM 11827]
Length = 693
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 40/212 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NL ++D ++ LFE GT+ A + N
Sbjct: 296 IYVKNLDTEIDEDEFRKLFEPYGTITSA----------------------------VLNL 327
Query: 222 ETD-RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP-- 278
+ D +S+GFGFV T E A+KAV+ + DI+G+ L V +A R + E R F+
Sbjct: 328 DADGKSKGFGFVNYETHEMAQKAVDALNEKDINGKKLFVGRAQKRNERDEELRRTFDAAK 387
Query: 279 --------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +Y+ N+ ++D+ +L F +G + +++++ D + G S+GFGFV S+
Sbjct: 388 MERLAKLQGVNLYIKNIDDDMDDEKLRAEFEPYGTITSSKIMRD-DKGVSKGFGFVCFST 446
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
E AIA ++ + + + + V++A+ R R
Sbjct: 447 PDEATRAIAEMNNKMIGSKPLYVSLAQRRDVR 478
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 2/164 (1%)
Query: 199 NQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 258
N+ H A V +V + E S+G+GFV T E A+ A++ ++ + +
Sbjct: 214 NKALHDTFVAFGNVLSCKVAVD-EQGNSKGYGFVHYETAEAADAAIKAVDGMLLNDKKVY 272
Query: 259 VNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 318
V + PR + + + IYV NL E+D ++F +G + +A + D + G
Sbjct: 273 VGRHIPRKERQSKLDEIRAQFTNIYVKNLDTEIDEDEFRKLFEPYGTITSAVLNLDAD-G 331
Query: 319 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
+S+GFGFV + A+ AL+ ++++G+ + V A+ R R
Sbjct: 332 KSKGFGFVNYETHEMAQKAVDALNEKDINGKKLFVGRAQKRNER 375
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
V+ ++V + T RS G+ +V + E+A+E + I G+ V+ R +R
Sbjct: 136 VASIRVCRDAVTRRSLGYAYVNYLNSSDGERALEQLNYSLIKGKPWHVS----RIMWSQR 191
Query: 272 APRVFEPG-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
P + + G I++ NL +DN L F G V++ +V D E G S+G+GFV +
Sbjct: 192 DPALRKTGQGNIFIKNLDEGIDNKALHDTFVAFGNVLSCKVAVD-EQGNSKGYGFVHYET 250
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
+ AI A+DG L+ + + V R+ R S
Sbjct: 251 AEAADAAIKAVDGMLLNDKKVYVGRHIPRKERQS 284
>gi|339501141|ref|YP_004699176.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
gi|338835490|gb|AEJ20668.1| RNP-1 like RNA-binding protein [Spirochaeta caldaria DSM 7334]
Length = 116
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 58/88 (65%)
Query: 275 VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
+F ++YVGNL + L +FS G V +A++++DRETG S+GFGFV MS++ E
Sbjct: 19 IFSMAKKLYVGNLSYNTSEDSLRNLFSNFGSVASAKIIFDRETGNSKGFGFVEMSTDEEA 78
Query: 335 NDAIAALDGQNLDGRAIRVNVAEDRQRR 362
+ AIA +G+ +GR +RVN A D+ RR
Sbjct: 79 SAAIAGTNGREFEGRQLRVNEAMDKPRR 106
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL Y+ + L LF G+V A ++I++
Sbjct: 25 KLYVGNLSYNTSEDSLRNLFSNFGSVASA--------------------------KIIFD 58
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET S+GFGFV MST EEA A+ + + +GR L VN+A
Sbjct: 59 RETGNSKGFGFVEMSTDEEASAAIAGTNGREFEGRQLRVNEA 100
>gi|315635463|ref|ZP_07890729.1| RNA-binding protein [Arcobacter butzleri JV22]
gi|315480221|gb|EFU70888.1| RNA-binding protein [Arcobacter butzleri JV22]
Length = 98
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 58/81 (71%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNL + +++ LE VF++ G+V +A+V+ D+ETGRS+GF FV M+ DAI AL
Sbjct: 13 IYVGNLSYRMNDKELETVFAKFGEVKSAKVIMDKETGRSKGFAFVEMADAKAGKDAIEAL 72
Query: 342 DGQNLDGRAIRVNVAEDRQRR 362
+G + +GR +RVN A+ R+ R
Sbjct: 73 NGNDCEGRTLRVNEAKPREER 93
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 26/110 (23%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNL Y ++ ++L +F K G V+ A +VI ++
Sbjct: 13 IYVGNLSYRMNDKELETVFAKFGEVKSA--------------------------KVIMDK 46
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
ET RS+GF FV M+ + + A+E + D +GR L VN+A PR +P R
Sbjct: 47 ETGRSKGFAFVEMADAKAGKDAIEALNGNDCEGRTLRVNEAKPREERPRR 96
>gi|449268618|gb|EMC79472.1| Polyadenylate-binding protein 4 [Columba livia]
Length = 630
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 110/237 (46%), Gaps = 46/237 (19%)
Query: 138 RQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLF 197
R+E E G + +EF +++ N D+D E+L LF K G
Sbjct: 176 RKEREAELGA-KAKEFTN------VYIKNFGDDMDDERLKELFSKYGK------------ 216
Query: 198 GNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL 257
+L + T +S+GFGFV+ E+A KAVE + DI+G+++
Sbjct: 217 ---------------TLSVKVMTDPTGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMV 261
Query: 258 TVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVV 307
V +A + + R FE G +Y+ NL +D+ +L + FS G +
Sbjct: 262 FVGRAQKKVERQAELKRKFEQLKQERLSRYQGVNLYIKNLDDTIDDEKLRKEFSPFGAIT 321
Query: 308 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
+A+V+ E GRS+GFGFV SS E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 322 SAKVML--EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKA 376
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 82/145 (56%), Gaps = 13/145 (8%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR---- 281
S+G+ FV T + A++A+E + ++ R + V G R R E G +
Sbjct: 137 SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFV------GRFKSRKEREAELGAKAKEF 190
Query: 282 --IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+Y+ N ++D+ RL+++FS++GK ++ +V+ D TG+S+GFGFV+ + N A+
Sbjct: 191 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEDANKAVE 249
Query: 340 ALDGQNLDGRAIRVNVAEDRQRRSS 364
++G++++G+ + V A+ + R +
Sbjct: 250 EMNGKDINGKMVFVGRAQKKVERQA 274
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P +YVG+L +V A L + FS G V++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 338 IAALDGQNLD---GRAIRV 353
ALD N D G+ IR+
Sbjct: 66 ERALDTMNFDVIKGKPIRI 84
>gi|407927556|gb|EKG20446.1| hypothetical protein MPH_02256 [Macrophomina phaseolina MS6]
Length = 485
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 31/209 (14%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P L+VG L + + L +FE AG +V ++
Sbjct: 84 PNKRALYVGGLDPRITEDVLRQIFETAG--------------------------HVVSVK 117
Query: 217 VIYNRETDRSRG--FGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
+I ++ +S+G +GFV AE+A++ + + + VN A QP+
Sbjct: 118 IIPDKNKFQSKGLNYGFVEYDDPGTAERAMQTLNGRRVHQSEIRVNWAYQSNNQPKEDTS 177
Query: 275 VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
F I+VG+L EV++ L Q FS G+V ARV++D +TGRSRG+GFV +
Sbjct: 178 NH---FHIFVGDLSNEVNDEVLLQAFSAFGQVSEARVMWDMKTGRSRGYGFVAFRDRGDA 234
Query: 335 NDAIAALDGQNLDGRAIRVNVAEDRQRRS 363
A++++DG+ L RAIR N A + + S
Sbjct: 235 EKALSSMDGEWLGSRAIRCNWANQKGQPS 263
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 91/247 (36%), Gaps = 68/247 (27%)
Query: 155 EPPEDAK----LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
+P ED +FVG+L +V+ E L F G V A V MW
Sbjct: 171 QPKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGQVSEARV------------MW----- 213
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ-- 268
+ +T RSRG+GFV +AEKA+ + R + N A +G
Sbjct: 214 ---------DMKTGRSRGYGFVAFRDRGDAEKALSSMDGEWLGSRAIRCNWANQKGQPSI 264
Query: 269 ----------------------PERAPRVFE------PGFR--IYVGNLPWEVDNARLEQ 298
P + +E P ++ YVGNL + L
Sbjct: 265 SQQQAMASMGMTPTTPYGHHHFPTHGVQSYEMVVNQTPQWQTTCYVGNLTPYTTQSDLVP 324
Query: 299 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 358
+F G VV R DR GF F+ M + AI L+G N++GR ++ + +D
Sbjct: 325 LFQNFGYVVETRFQSDR------GFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 378
Query: 359 RQRRSSF 365
R F
Sbjct: 379 RPPTGQF 385
>gi|156360993|ref|XP_001625306.1| predicted protein [Nematostella vectensis]
gi|156212133|gb|EDO33206.1| predicted protein [Nematostella vectensis]
Length = 584
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 96/171 (56%), Gaps = 15/171 (8%)
Query: 206 VCA-VFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP 264
+CA + L+V+ + E +S+GFGFV+ T EEAE+AV + + +I GR L +A
Sbjct: 213 ICAEAGKIVSLKVMTDPE-GKSKGFGFVSFETPEEAEEAVNVLNGKEIGGRRLWAGRAKK 271
Query: 265 RG---------TQPERAPRV--FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVY 313
R + +R R+ F+ G +Y+ NL +D+ RL + FS +G + +A+V+
Sbjct: 272 RAERAAEVKAEIEKKRQERINRFQ-GVNLYIKNLDDPIDDERLREEFSPYGTISSAKVMK 330
Query: 314 DRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
D + G S+GFGFV SS E A+ ++G+ L + + V +A+ R+ R +
Sbjct: 331 D-DKGNSKGFGFVCFSSPEEATKAVTEMNGRILISKPLYVALAQRREERKA 380
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 25/159 (15%)
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA------------APR 265
I E +G+GFV T + A +A+ +DG LL K
Sbjct: 132 IAQDELGNPKGYGFVHFETEDAALEAIA-----RVDGMLLNDKKVFVGRWMSKKERIEKM 186
Query: 266 GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 325
GTQP++ V YV N ++D+ +++++ +E GK+V+ +V+ D E G+S+GFGF
Sbjct: 187 GTQPKKFTNV-------YVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPE-GKSKGFGF 238
Query: 326 VTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
V+ + E +A+ L+G+ + GR + A+ R R++
Sbjct: 239 VSFETPEEAEEAVNVLNGKEIGGRRLWAGRAKKRAERAA 277
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVG+L +V A L + FS G V++ RV D T RS G+ +V A+ +
Sbjct: 15 LYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHAEKALDTM 74
Query: 342 DGQNLDGRAIRV 353
+ + GR R+
Sbjct: 75 NFDPIKGRPCRI 86
>gi|307718869|ref|YP_003874401.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
gi|306532594|gb|ADN02128.1| hypothetical protein STHERM_c11870 [Spirochaeta thermophila DSM
6192]
Length = 100
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
F+IYVGNL ++ L Q+F ++G+V + +++ DR++G S+GFGFV MSSE AI+
Sbjct: 3 FKIYVGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMSSEEAGEAAIS 62
Query: 340 ALDGQNLDGRAIRVNVAEDRQRRSSF 365
AL+ L+GR +RVN A +R RRSSF
Sbjct: 63 ALNQHELEGRQLRVNKAHER-RRSSF 87
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K++VGNL Y + L LFE+ G VE +++I +
Sbjct: 4 KIYVGNLNYQTTEDTLRQLFEQYGEVES--------------------------VKIITD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
R++ S+GFGFV MS+ E E A+ ++++++GR L VNKA R
Sbjct: 38 RDSGFSKGFGFVEMSSEEAGEAAISALNQHELEGRQLRVNKAHER 82
>gi|328715672|ref|XP_001946271.2| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 964
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 40/214 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+++ N+ +V+ ++L +F+K GT+ +V F +
Sbjct: 499 VYIKNIDENVNEKELFEMFKKYGTITSCKVMF---------------------------K 531
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFH-RYDIDGRLLTVNKAAPRGTQPERAPRVFEP-- 278
+ SRGFGFV +EAEKAV H + +G+ VN+A + + + R FE
Sbjct: 532 DDGSSRGFGFVAFEDPKEAEKAVTELHGKKSPEGKTYYVNRAQKKTERQQELKRKFEQYK 591
Query: 279 --------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +YV NL +D+ RL + FS G + +A+V+ D GRS+GFGFV SS
Sbjct: 592 IERINRYQGVNLYVKNLDDTIDDERLRREFSAFGTIKSAKVMMD--DGRSKGFGFVYFSS 649
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 650 PEEATKAVTDMNGRIVGTKPLYVTLAQRKKDRKA 683
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 93/192 (48%), Gaps = 6/192 (3%)
Query: 176 LAMLFEKAGTV--EIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV--IYNRETDRSRGFGF 231
L++ F+ A T+ +I V+ N C ++L V + ET S+G+GF
Sbjct: 389 LSVCFDGASTMAGKIGGVQTKCKEQNSNIKYIHCYAHCLNLALVDSVAQDETGNSKGYGF 448
Query: 232 VTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEV 291
V T + A +++E + ++G+ + V + R + + + + +Y+ N+ V
Sbjct: 449 VHFETKQSATQSIEKVNGMLLNGKKVFVGRFVGRNDREKELGQQAKLYTNVYIKNIDENV 508
Query: 292 DNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNL-DGRA 350
+ L ++F ++G + + +V++ ++ G SRGFGFV E A+ L G+ +G+
Sbjct: 509 NEKELFEMFKKYGTITSCKVMF-KDDGSSRGFGFVAFEDPKEAEKAVTELHGKKSPEGKT 567
Query: 351 IRVNVAEDRQRR 362
VN A+ + R
Sbjct: 568 YYVNRAQKKTER 579
>gi|134083605|emb|CAL00520.1| unnamed protein product [Aspergillus niger]
Length = 381
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 31/204 (15%)
Query: 155 EPPEDAK-LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
EPP + +F+GN+ YDV E L EK G VE K + N+G
Sbjct: 190 EPPTPKETVFIGNVFYDVTREDLKKAMEKYGVVE----KVVLVLDNRGI----------- 234
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAP 273
S+G+G+V +++ A++AV+ + +GR +TV + A R
Sbjct: 235 ------------SKGYGYVQFDSIDAAQRAVDALNMRLFEGRRVTV-QFAQNNVYHRR-- 279
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
++ P +Y+GNLP+E+ + L ++F + VV+ RV DR TG++RGF S +
Sbjct: 280 QLNAPTRTLYIGNLPFEMTDRDLNELFKDVQNVVDIRVAVDRRTGQARGFAHAEFVSTSS 339
Query: 334 LNDAIAALDGQNLDGRAIRVNVAE 357
A+A L+ + GR +R++ ++
Sbjct: 340 AKAAMAILENKLPYGRRLRLDYSK 363
>gi|338762832|gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]
Length = 368
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 103/206 (50%), Gaps = 34/206 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DA +VGNL V E L LF +AG V V+ V
Sbjct: 23 QDATAYVGNLDPQVSEELLWELFVQAGPV--------------------VNVY------V 56
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+R T+ +G+GFV + E+A+ A+++ + + G+ + VNKA +Q +++ V
Sbjct: 57 PKDRVTNSHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA----SQDKKSVDV-- 110
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVV-NARVVYDRETGRSRGFGFVTMSSETELND 336
G +++GNL +VD L FS G +V N +++ D ETG SRGFGF++ S +
Sbjct: 111 -GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDA 169
Query: 337 AIAALDGQNLDGRAIRVNVAEDRQRR 362
AI A++GQ L R I V+ A + +
Sbjct: 170 AIEAMNGQYLCNRQITVSYAYKKDTK 195
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF+GNL DVD + L F G + V+ +++
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVI-------------------------VTNPKIMR 146
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+ ET SRGFGF++ + E ++ A+E + + R +TV+ A + T+ ER
Sbjct: 147 DPETGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
>gi|157736330|ref|YP_001489013.1| RNA recognition motif-containing protein [Arcobacter butzleri
RM4018]
gi|384154771|ref|YP_005537586.1| RNA recognition motif-containing protein [Arcobacter butzleri ED-1]
gi|157698184|gb|ABV66344.1| RNA-binding region RNP-1 (RNA recognition motif) [Arcobacter
butzleri RM4018]
gi|345468325|dbj|BAK69776.1| RNA recognition motif-containing protein [Arcobacter butzleri ED-1]
Length = 98
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 58/81 (71%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNL + +++ LE VF++ G+V +A+V+ D+ETGRS+GF FV M+ DAI AL
Sbjct: 13 IYVGNLSYRMNDKELETVFAKFGEVKSAKVIMDKETGRSKGFAFVEMADAKAGKDAIEAL 72
Query: 342 DGQNLDGRAIRVNVAEDRQRR 362
+G + +GR +RVN A+ R+ R
Sbjct: 73 NGNDCEGRTLRVNEAKPREER 93
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 26/110 (23%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNL Y ++ ++L +F K G V+ A +VI ++
Sbjct: 13 IYVGNLSYRMNDKELETVFAKFGEVKSA--------------------------KVIMDK 46
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
ET RS+GF FV M+ + + A+E + D +GR L VN+A PR +P R
Sbjct: 47 ETGRSKGFAFVEMADAKAGKDAIEALNGNDCEGRTLRVNEAKPREERPRR 96
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 84/148 (56%), Gaps = 5/148 (3%)
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
V+ +V +R T +SRGFG+V +T A+KA E ++DGR + ++ + P+G E
Sbjct: 233 VTSARVQLDRTTGKSRGFGYVDFATAAAAKKAFEEGQGKEVDGRAIRLDLSTPKGDVTEN 292
Query: 272 APRVFE-----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
+ F P +++GNL +++ + FSEHG+V R+ D ++GR +GFG+V
Sbjct: 293 RAKKFNDQRSAPSSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYV 352
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVN 354
+++ A+ A+ GQ L GR +R++
Sbjct: 353 EFAAQESAQAALDAMTGQELAGRPLRLD 380
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W VDN L+ G+V +ARV DR TG+SRGFG+V ++ A
Sbjct: 208 QVWVGQLSWNVDNDWLKSEMEVFGEVTSARVQLDRTTGKSRGFGYVDFATAAAAKKAFEE 267
Query: 341 LDGQNLDGRAIRVNVA 356
G+ +DGRAIR++++
Sbjct: 268 GQGKEVDGRAIRLDLS 283
>gi|326933139|ref|XP_003212666.1| PREDICTED: polyadenylate-binding protein 4-like [Meleagris
gallopavo]
Length = 636
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 39/213 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+++ N D+D E+L LF K G +L +
Sbjct: 199 VYIKNFGDDMDDERLKELFSKYGK---------------------------TLSVKVMTD 231
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
T +S+GFGFV+ E+A KAVE + DI+G+++ V +A + + R FE
Sbjct: 232 PTGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQ 291
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +Y+ NL +D+ +L + FS G + +A+V+ E GRS+GFGFV SS
Sbjct: 292 ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSSP 349
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 350 EEATKAVTEMNGRIVGSKPLYVALAQRKEERKA 382
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 82/145 (56%), Gaps = 13/145 (8%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR---- 281
S+G+ FV T + A++A+E + ++ R + V G R R E G +
Sbjct: 143 SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFV------GRFKSRKEREAELGAKAKEF 196
Query: 282 --IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+Y+ N ++D+ RL+++FS++GK ++ +V+ D TG+S+GFGFV+ + N A+
Sbjct: 197 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEDANKAVE 255
Query: 340 ALDGQNLDGRAIRVNVAEDRQRRSS 364
++G++++G+ + V A+ + R +
Sbjct: 256 EMNGKDINGKMVFVGRAQKKVERQA 280
>gi|242039481|ref|XP_002467135.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
gi|241920989|gb|EER94133.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
Length = 355
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 34/200 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DA +VGNL V E L LF +AG V V+ V
Sbjct: 23 QDATTYVGNLDPQVSEELLWELFVQAGPV--------------------VNVY------V 56
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+R T+ +G+GFV + E+A+ A+++ + + G+ + VNKA+ + + +
Sbjct: 57 PKDRVTNLHQGYGFVEFRSEEDADYAIKILNMIKLYGKPIRVNKAS-------QDKKSLD 109
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVV-NARVVYDRETGRSRGFGFVTMSSETELND 336
G +++GNL +VD L FS G +V N +++ D ETG SRGFGFV+ S +
Sbjct: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQ 169
Query: 337 AIAALDGQNLDGRAIRVNVA 356
AI A++ Q+L R I V+ A
Sbjct: 170 AIEAMNNQHLCNRPITVSYA 189
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 283 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 342
YVGNL +V L ++F + G VVN V DR T +G+GFV SE + + AI L+
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 343 GQNLDGRAIRVNVAEDRQR 361
L G+ IRVN A ++
Sbjct: 88 MIKLYGKPIRVNKASQDKK 106
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 28/134 (20%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF+GNL DVD + L F G + V+ +++
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVI-------------------------VTNPKIMR 146
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ ET SRGFGFV+ + E +++A+E + + R +TV+ A + T+ ER P
Sbjct: 147 DPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKGERH---GTPA 203
Query: 280 FRIYVGNLPWEVDN 293
R+ N P N
Sbjct: 204 ERLLAANNPGSQKN 217
>gi|118101731|ref|XP_417821.2| PREDICTED: polyadenylate-binding protein 4 [Gallus gallus]
Length = 630
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 39/213 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+++ N D+D E+L LF K G +L +
Sbjct: 193 VYIKNFGDDMDDERLKELFSKYGK---------------------------TLSVKVMTD 225
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
T +S+GFGFV+ E+A KAVE + DI+G+++ V +A + + R FE
Sbjct: 226 PTGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQ 285
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +Y+ NL +D+ +L + FS G + +A+V+ E GRS+GFGFV SS
Sbjct: 286 ERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML--EDGRSKGFGFVCFSSP 343
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 344 EEATKAVTEMNGRIVGSKPLYVALAQRKEERKA 376
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 80/139 (57%), Gaps = 1/139 (0%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVG 285
S+G+ FV T + A++A+E + ++ R + V + R + + +Y+
Sbjct: 137 SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIK 196
Query: 286 NLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN 345
N ++D+ RL+++FS++GK ++ +V+ D TG+S+GFGFV+ + N A+ ++G++
Sbjct: 197 NFGDDMDDERLKELFSKYGKTLSVKVMTD-PTGKSKGFGFVSFEKHEDANKAVEEMNGKD 255
Query: 346 LDGRAIRVNVAEDRQRRSS 364
++G+ + V A+ + R +
Sbjct: 256 INGKMVFVGRAQKKVERQA 274
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P +YVG+L +V A L + FS G V++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 338 IAALDGQNLD---GRAIRV 353
ALD N D G+ IR+
Sbjct: 66 ERALDTMNFDVIKGKPIRI 84
>gi|398810917|ref|ZP_10569726.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
gi|398081873|gb|EJL72641.1| RRM domain-containing RNA-binding protein [Variovorax sp. CF313]
Length = 134
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 58/84 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNL + V + LEQ F E G +V+A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GKKLYVGNLAYSVRDNDLEQAFGEFGAIVSAKVMMERDTGRSKGFGFVEMGSDAEALAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
A++G +L GRA+ VN A + R
Sbjct: 62 EAMNGHSLQGRALTVNEARPMEAR 85
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 26/111 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL Y V L F + G + A +V+
Sbjct: 4 KLYVGNLAYSVRDNDLEQAFGEFGAIVSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
R+T RS+GFGFV M + EA A+E + + + GR LTVN+A P +P R
Sbjct: 38 RDTGRSKGFGFVEMGSDAEALAAIEAMNGHSLQGRALTVNEARPMEARPPR 88
>gi|319791037|ref|YP_004152677.1| rnp-1 like RNA-binding protein [Variovorax paradoxus EPS]
gi|315593500|gb|ADU34566.1| RNP-1 like RNA-binding protein [Variovorax paradoxus EPS]
Length = 138
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 58/84 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNL + V + LEQ F E G +V+A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GKKLYVGNLAYSVRDNDLEQAFGEFGAIVSAKVMMERDTGRSKGFGFVEMGSDAEALAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
A++G +L GRA+ VN A + R
Sbjct: 62 EAMNGHSLQGRALTVNEARPMEAR 85
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 51/111 (45%), Gaps = 26/111 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL Y V L F + G + A +V+
Sbjct: 4 KLYVGNLAYSVRDNDLEQAFGEFGAIVSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
R+T RS+GFGFV M + EA A+E + + + GR LTVN+A P +P R
Sbjct: 38 RDTGRSKGFGFVEMGSDAEALAAIEAMNGHSLQGRALTVNEARPMEARPPR 88
>gi|114682135|ref|XP_514668.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 2
[Pan troglodytes]
gi|397511247|ref|XP_003825989.1| PREDICTED: polyadenylate-binding protein 1-like [Pan paniscus]
Length = 614
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 41/215 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NLP DVD + L LF + G +L V R
Sbjct: 193 IYVKNLPVDVDEQGLQELFSQFG----------------------------KMLSVKVMR 224
Query: 222 E-TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE--- 277
+ + SR FGFV EEA+KAV + ++ GRLL +A R + R FE
Sbjct: 225 DNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMK 284
Query: 278 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +YV NL +D+ +L + FS +G + +A+V+ E G S+GFGFV SS
Sbjct: 285 QDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSS 342
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 343 PEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML+EK F G + ++V
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEK--------------FSPAG---------PILSIRVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + + G+ + + + +R P + + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++ +V D E G SRGFGFV + AI
Sbjct: 98 VGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACD-EHG-SRGFGFVHFETHEAAQQAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + R+ R
Sbjct: 156 NTMNGMLLNDRKVFVGHFKSRRER 179
>gi|388582290|gb|EIM22595.1| polyadenylate binding protein [Wallemia sebi CBS 633.66]
Length = 637
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 38/211 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+F+ NL VD EK + E G + L V+
Sbjct: 221 VFIKNLDVSVDDEKFKQILEPYGEI---------------------------LSAVVQKD 253
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
E SRGFGFV EEA KAVE + ++DG+ + +A + + E R +E
Sbjct: 254 EQGNSRGFGFVNYKNHEEAAKAVESLNEVEVDGKKIFAARAQKKNEREEELRRNYEQAKL 313
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL + D+ RL F G + +A+++ D E G S+GFGFV SS
Sbjct: 314 EKLAKYAGVNLYVKNLDDDFDDERLVGEFEPFGTITSAKIMRD-EKGTSKGFGFVCFSSP 372
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
E A++ L G+ + + + V++A+ R R
Sbjct: 373 DEATKAVSELSGKMIGSKPLYVSLAQRRDVR 403
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 35/198 (17%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P+ A L+VG L V AMLFE F+M + V+ ++
Sbjct: 35 PQSASLYVGELDPTVTE---AMLFEI-------------------FNM----IGPVASIR 68
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
V + T RS G+ +V +++ E+A+E + I R A R +R P +
Sbjct: 69 VCRDAVTRRSLGYAYVNYLNLQDGERALEQLNYSLIKNR-------ACRIMWSQRDPALR 121
Query: 277 EPG-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
+ G I++ NL +DN L F+ G V++ +V D E G SRG+GFV + +
Sbjct: 122 KTGQGNIFIKNLDEAIDNKALHDTFAAFGNVLSCKVATD-ENGNSRGYGFVHYENGESAS 180
Query: 336 DAIAALDGQNLDGRAIRV 353
AI ++G L+ + + V
Sbjct: 181 AAIQHVNGMLLNDKKVYV 198
>gi|400601150|gb|EJP68793.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 522
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 48/221 (21%)
Query: 149 EEEEFVEPP----------EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFG 198
EE EF PP +D K+F+G L ++ + L F + G E+ E
Sbjct: 95 EEPEFTAPPLGTVHKASAKDDGKMFIGGLNWETTDQSLRDYFSQFG--EVVE-------- 144
Query: 199 NQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 258
C V + + T RSRGFGF+T + + M + +DG+++
Sbjct: 145 --------CTV--------MRDSNTGRSRGFGFLTFKDAKTVN--IVMVKEHYLDGKIID 186
Query: 259 VNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 318
+A PR Q + + +I+VG + + + F++ G+V++A ++ D++TG
Sbjct: 187 PKRAIPRDEQEKTS--------KIFVGGVSQDTTDQEFRDFFAQFGRVIDATLMMDKDTG 238
Query: 319 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDR 359
R RGFGFVT SE +++ I+ + G+ I V A+ R
Sbjct: 239 RPRGFGFVTFESEAGVDNCISIP--LEIHGKPIEVKRAQPR 277
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++++G L WE + L FS+ G+VV V+ D TGRSRGFGF+T +N I
Sbjct: 117 KMFIGGLNWETTDQSLRDYFSQFGEVVECTVMRDSNTGRSRGFGFLTFKDAKTVN--IVM 174
Query: 341 LDGQNLDGRAI--RVNVAEDRQRRSS 364
+ LDG+ I + + D Q ++S
Sbjct: 175 VKEHYLDGKIIDPKRAIPRDEQEKTS 200
>gi|220903771|ref|YP_002479083.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868070|gb|ACL48405.1| RNP-1 like RNA-binding protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 88
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNL W +E +FS G+V++ ++ DRETGR+RGFGFV M + N AI+AL
Sbjct: 5 IYVGNLSWSTTQGDVESLFSAFGQVLSVNLISDRETGRARGFGFVEMEDDDAAN-AISAL 63
Query: 342 DGQNLDGRAIRVNVAEDRQ 360
DG+ +DGR++RVN AE ++
Sbjct: 64 DGKEVDGRSLRVNKAEPKK 82
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+ +I +RET R+RGFGFV M ++A A+ ++DGR L VNKA P+ R
Sbjct: 32 VNLISDRETGRARGFGFVEMED-DDAANAISALDGKEVDGRSLRVNKAEPKKPAARR 87
>gi|389741761|gb|EIM82949.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 145
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/76 (53%), Positives = 53/76 (69%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W + L Q FSE G ++++ V+ DRETGRSRGFGFVT + E + AI
Sbjct: 4 KVYVGNLSWNTTDDTLRQAFSEFGAILDSIVMRDRETGRSRGFGFVTFGTPEEADAAINN 63
Query: 341 LDGQNLDGRAIRVNVA 356
L+ Q LDGR IRVN+A
Sbjct: 64 LNEQELDGRRIRVNLA 79
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 26/103 (25%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
AK++VGNL ++ + L F + G + + V+
Sbjct: 3 AKVYVGNLSWNTTDDTLRQAFSEFGAILDS--------------------------IVMR 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+RET RSRGFGFVT T EEA+ A+ + ++DGR + VN A
Sbjct: 37 DRETGRSRGFGFVTFGTPEEADAAINNLNEQELDGRRIRVNLA 79
>gi|297707183|ref|XP_002830392.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Pongo
abelii]
Length = 614
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 41/215 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NLP DVD + L LF + G +L V R
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFG----------------------------KMLSVKVMR 224
Query: 222 E-TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE--- 277
+ + SR FGFV EEA+KAV + ++ GRLL +A R + R FE
Sbjct: 225 DNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMK 284
Query: 278 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +YV NL +D+ +L + FS +G + +A+V+ E G S+GFGFV SS
Sbjct: 285 QDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSS 342
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 343 PEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML+EK F G + ++V
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEK--------------FSPAG---------PILSIRVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + + G+ + + + +R P + + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++ +V D E G SRGFGFV + AI
Sbjct: 98 VGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACD-EHG-SRGFGFVHFETHEAAQQAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + R+ R
Sbjct: 156 NTMNGMLLNDRKVFVGHFKSRRER 179
>gi|119596297|gb|EAW75891.1| hCG2019100, isoform CRA_e [Homo sapiens]
Length = 617
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 41/219 (18%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E ++V NLP DVD + L LF + G +L V
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFG----------------------------KMLSV 220
Query: 218 IYNRE-TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
R+ + SR FGFV EEA+KAV + ++ GRLL +A R + R F
Sbjct: 221 KVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRF 280
Query: 277 E----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
E G +YV NL +D+ +L + FS +G + +A+V+ E G S+GFGFV
Sbjct: 281 EQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVM--TEGGHSKGFGFV 338
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
SS E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 339 CFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML+EK F G + ++V
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEK--------------FSPAG---------PILSIRVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + + G+ + + + +R P + + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++ +V D E G SRGFGFV + AI
Sbjct: 98 VGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACD-EHG-SRGFGFVHFETHEAAQQAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + R+ R
Sbjct: 156 NTMNGMLLNDRKVFVGHFKSRRER 179
>gi|195113003|ref|XP_002001061.1| GI10577 [Drosophila mojavensis]
gi|193917655|gb|EDW16522.1| GI10577 [Drosophila mojavensis]
Length = 359
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 100/229 (43%), Gaps = 36/229 (15%)
Query: 135 AGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFH 194
G + G +++ EP KLF+G L Y + L FEK G +
Sbjct: 2 GGHNDQNGNSNGQHDDDSISEPEHMRKLFIGGLDYRTTDDNLKAHFEKWGQI-------- 53
Query: 195 FLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMS---TVEEAEKAVEMFHRYD 251
V ++ V+ + T RSRGFGF+T S V+EA+KA +
Sbjct: 54 -----------------VDVV-VMKDPRTKRSRGFGFITYSHSSMVDEAQKARP----HK 91
Query: 252 IDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARV 311
IDGR++ +A PR Q +P +++VG L + D L F +G +V+ +
Sbjct: 92 IDGRVVEPKRAVPR--QDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGNIVDINI 149
Query: 312 VYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
V D+ETG+ RGF FV + D + L+G+ + V A +Q
Sbjct: 150 VMDKETGKKRGFAFVEFDDYDPV-DKVVLQKQHQLNGKMVDVKKALPKQ 197
>gi|119596296|gb|EAW75890.1| hCG2019100, isoform CRA_d [Homo sapiens]
Length = 639
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 100/218 (45%), Gaps = 39/218 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E ++V NLP DVD + L LF + G ++ VK
Sbjct: 189 EFTNIYVKNLPVDVDEQGLQDLFSQFG--KMLSVK------------------------- 221
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+ + SR FGFV EEA+KAV + ++ GRLL +A R + R FE
Sbjct: 222 VMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFE 281
Query: 278 ----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
G +YV NL +D+ +L + FS +G + +A+V+ E G S+GFGFV
Sbjct: 282 QMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVC 339
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
SS E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 340 FSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML+EK F G + ++V
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEK--------------FSPAG---------PILSIRVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + + G+ + + + +R P + + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++ +V D E G SRGFGFV + AI
Sbjct: 98 VGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACD-EHG-SRGFGFVHFETHEAAQQAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + R+ R
Sbjct: 156 NTMNGMLLNDRKVFVGHFKSRRER 179
>gi|223942615|gb|ACN25391.1| unknown [Zea mays]
Length = 120
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + +AI
Sbjct: 8 YRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 GMNGKELDGRNITVNEAQ 85
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F G E+ E K +I +
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYG--EVLESK------------------------IILD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT ST E A+E + ++DGR +TVN+A
Sbjct: 43 RETQRSRGFGFVTFSTEEAMRNAIEGMNGKELDGRNITVNEA 84
>gi|426391820|ref|XP_004062264.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Gorilla
gorilla gorilla]
Length = 614
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 41/215 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NLP DVD + L LF + G +L V R
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFG----------------------------KMLSVKVMR 224
Query: 222 E-TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE--- 277
+ + SR FGFV EEA+KAV + ++ GRLL +A R + R FE
Sbjct: 225 DNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMK 284
Query: 278 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +YV NL +D+ +L + FS +G + +A+V+ E G S+GFGFV SS
Sbjct: 285 QDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSS 342
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 343 PEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML+EK F G + ++V
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEK--------------FSPAG---------PILSIRVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + + G+ + + + +R P + + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++ +V D E G SRGFGFV + AI
Sbjct: 98 VGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACD-EHG-SRGFGFVHFETHEAAQQAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + R+ R
Sbjct: 156 NTMNGMLLNDRKVFVGHFKSRRER 179
>gi|115482332|ref|NP_001064759.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|31432465|gb|AAP54095.1| Splicing factor 3B subunit 4, putative, expressed [Oryza sativa
Japonica Group]
gi|113639368|dbj|BAF26673.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|215737182|dbj|BAG96111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184664|gb|EEC67091.1| hypothetical protein OsI_33883 [Oryza sativa Indica Group]
Length = 355
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 99/200 (49%), Gaps = 34/200 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DA +VGNL V E L LF +AG V V+ V
Sbjct: 23 QDATTYVGNLDPQVSEELLWELFVQAGPV--------------------VNVY------V 56
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+R T+ +G+GFV + E+A+ A+++ + + G+ + VNKA+ + + +
Sbjct: 57 PKDRVTNLHQGYGFVEFRSEEDADYAIKILNMIKLYGKPIRVNKAS-------QDKKSLD 109
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVV-NARVVYDRETGRSRGFGFVTMSSETELND 336
G +++GNL +VD L FS G +V N +++ D ETG SRGFGFV+ S +
Sbjct: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQ 169
Query: 337 AIAALDGQNLDGRAIRVNVA 356
AI A++ Q+L R I V+ A
Sbjct: 170 AIEAMNNQHLCNRPITVSYA 189
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 283 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 342
YVGNL +V L ++F + G VVN V DR T +G+GFV SE + + AI L+
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 343 GQNLDGRAIRVNVAEDRQR 361
L G+ IRVN A ++
Sbjct: 88 MIKLYGKPIRVNKASQDKK 106
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 28/134 (20%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF+GNL DVD + L F G + V+ +++
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVI-------------------------VTNPKIMR 146
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ ET SRGFGFV+ + E +++A+E + + R +TV+ A + T+ ER P
Sbjct: 147 DPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKGERH---GTPA 203
Query: 280 FRIYVGNLPWEVDN 293
R+ N P N
Sbjct: 204 ERLLAANNPGSQKN 217
>gi|388495644|gb|AFK35888.1| unknown [Medicago truncatula]
Length = 92
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 51/69 (73%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ LEQ FS+ G++ +++V+ DRETGRSRGFGFVT + E + DAI
Sbjct: 8 YRCFVGGLAWATDSRALEQAFSKFGEITDSKVINDRETGRSRGFGFVTFAEEKSMRDAIE 67
Query: 340 ALDGQNLDG 348
++GQ++DG
Sbjct: 68 EMNGQDIDG 76
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 41/94 (43%), Gaps = 26/94 (27%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + DS L F K G EI + K VI +
Sbjct: 9 RCFVGGLAWATDSRALEQAFSKFG--EITDSK------------------------VIND 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDG 254
RET RSRGFGFVT + + A+E + DIDG
Sbjct: 43 RETGRSRGFGFVTFAEEKSMRDAIEEMNGQDIDG 76
>gi|115473215|ref|NP_001060206.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|113611742|dbj|BAF22120.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|222637411|gb|EEE67543.1| hypothetical protein OsJ_25023 [Oryza sativa Japonica Group]
Length = 238
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 64/105 (60%)
Query: 254 GRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVY 313
GR++ + + P V +++VG L + D+ L+ VFS +G V+ AR++
Sbjct: 5 GRVVNALRRTSVSSNPSLLQAVRCMSSKLFVGGLSYATDDTTLKDVFSHYGDVLEARIII 64
Query: 314 DRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 358
DR+TG+S+G+GF+T +S E A+ A+DG++L GR +RV+ A D
Sbjct: 65 DRDTGKSKGYGFITYTSSEEAAAAVTAMDGKDLQGRIVRVSTAND 109
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 26/103 (25%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KLFVG L Y D L +F G V A ++I
Sbjct: 31 SKLFVGGLSYATDDTTLKDVFSHYGDVLEA--------------------------RIII 64
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+R+T +S+G+GF+T ++ EEA AV D+ GR++ V+ A
Sbjct: 65 DRDTGKSKGYGFITYTSSEEAAAAVTAMDGKDLQGRIVRVSTA 107
>gi|213403408|ref|XP_002172476.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212000523|gb|EEB06183.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 662
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 38/213 (17%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+++ N+ +V E+ + LFEK G A+ SL++
Sbjct: 262 VYIKNIDPEVTDEEFSGLFEKFG-----------------------AITSFSLVK----D 294
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP--- 278
E+ + RGFGFV + E A+KAV+ + Y+ G+ L V +A R + + +E
Sbjct: 295 ESGKPRGFGFVNFESHEAAQKAVDEMNDYEFHGKKLYVGRAQKRHEREAELRKRYEQMKL 354
Query: 279 -------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +++ NL EVD+ L+ FS G + +A+V+ D E G+S+GFGFV SS
Sbjct: 355 EKMSKYQGVNLFIKNLSDEVDDNLLKTEFSAFGTITSAKVMTD-ENGKSKGFGFVCYSSP 413
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
E AIA ++ + L G+ + V +A+ + R S
Sbjct: 414 EEATKAIAEMNQRMLAGKPLYVALAQRKDVRRS 446
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 35/209 (16%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P++ L+VG L V AMLFE TV V+ ++
Sbjct: 76 PKNTSLYVGELDPSVTE---AMLFEIFSTVGP-----------------------VASIR 109
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
V + T +S G+ +V ++ EKA+E + I GR A R +R P +
Sbjct: 110 VCRDAVTRQSLGYAYVNYHNADDGEKALEELNYSLIKGR-------ACRIMWSQRDPSLR 162
Query: 277 EPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
+ G I++ NL +DN L FS G +++ +V D E G S+G+GFV +S N
Sbjct: 163 KTGTGNIFIKNLDPAIDNKALHDTFSAFGTILSCKVALD-EYGNSKGYGFVHFASIDSAN 221
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
AI ++G L+ + + V R+ R S
Sbjct: 222 AAIEHVNGMLLNDKKVYVGHHVSRRDRQS 250
>gi|384486188|gb|EIE78368.1| hypothetical protein RO3G_03072 [Rhizopus delemar RA 99-880]
Length = 499
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 37/213 (17%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V N+P+DV E+L+ LF K GT+ C VI
Sbjct: 211 IYVKNIPFDVTDEELSQLFGKYGTI------------------TSC---------VITRD 243
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
+ S+GFGFV ++A+ AV+ H+ D G+ L V++A + + E R +E
Sbjct: 244 DDGTSKGFGFVNFEKHQDAQNAVDDLHKKDFRGQDLYVSRAQKKNEREEELRRQYEEAKL 303
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL ++D+ RL FS +G + +A+++ D +T SRGFGFV +S
Sbjct: 304 EKMSKYQGVNLYVKNLDDDMDDDRLRDEFSVYGVITSAKIMRDEKTNISRGFGFVCFTSP 363
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
+ A+ ++G+ + + I V +A+ ++ R S
Sbjct: 364 EDATRAVTEMNGRIIGSKPIYVAIAQRKEVRRS 396
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
VS ++V + T RS G+ +V + +AE+A+E + I GR + R +R
Sbjct: 54 VSSIRVCRDAVTRRSLGYAYVNFHRMADAERALETLNYSMIKGR-------SCRIMWSQR 106
Query: 272 APRVFEPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
P + + I++ NL +D+ L FS G +++ ++ +D E G S+G+GFV +
Sbjct: 107 DPSLRKGNNGNIFIKNLDPSIDHKALHDTFSAFGNILSCKIAHD-EQGNSKGYGFVHYET 165
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
AI +++G L+ R + V R+ R S
Sbjct: 166 LEAAESAIKSVNGMLLNDRKVFVGHHISRKERES 199
>gi|185135971|ref|NP_001118228.1| polyadenylate-binding protein 1-like [Homo sapiens]
gi|74754038|sp|Q4VXU2.1|PAP1L_HUMAN RecName: Full=Polyadenylate-binding protein 1-like
gi|119596298|gb|EAW75892.1| hCG2019100, isoform CRA_f [Homo sapiens]
Length = 614
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 41/215 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NLP DVD + L LF + G +L V R
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFG----------------------------KMLSVKVMR 224
Query: 222 E-TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE--- 277
+ + SR FGFV EEA+KAV + ++ GRLL +A R + R FE
Sbjct: 225 DNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMK 284
Query: 278 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +YV NL +D+ +L + FS +G + +A+V+ E G S+GFGFV SS
Sbjct: 285 QDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSS 342
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 343 PEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML+EK F G + ++V
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEK--------------FSPAG---------PILSIRVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + + G+ + + + +R P + + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++ +V D E G SRGFGFV + AI
Sbjct: 98 VGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACD-EHG-SRGFGFVHFETHEAAQQAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + R+ R
Sbjct: 156 NTMNGMLLNDRKVFVGHFKSRRER 179
>gi|296200520|ref|XP_002747628.1| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 614
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 41/215 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NLP DVD + L LF + G +L V R
Sbjct: 193 IYVKNLPADVDEQGLQDLFSQFG----------------------------KMLSVKVMR 224
Query: 222 E-TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE--- 277
+ + RSR FGFV EEA+KAV + ++ GRLL ++A R + R FE
Sbjct: 225 DNSGRSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYASRAQKRVERQNELKRKFEQMK 284
Query: 278 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +YV NL +D+ +L + FS +G + +A+V+ E S+GFGFV SS
Sbjct: 285 QDRLSRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVM--TEGSHSKGFGFVCFSS 342
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 343 PEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 75/143 (52%), Gaps = 13/143 (9%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR---- 281
SRGFGFV T E A++A+ + ++ R + V G R R E G R
Sbjct: 137 SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFV------GHFKSRRERAAELGARALEF 190
Query: 282 --IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
IYV NLP +VD L+ +FS+ GK+++ +V+ D +GRSR FGFV E A+
Sbjct: 191 TNIYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRD-NSGRSRCFGFVNFEKHEEAQKAVV 249
Query: 340 ALDGQNLDGRAIRVNVAEDRQRR 362
++G+ + GR + + A+ R R
Sbjct: 250 HMNGKEVSGRLLYASRAQKRVER 272
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P +YVG+L +V A L + FS G +++ RV D T RS G+ ++ + A
Sbjct: 9 PLASLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQPADAERA 68
Query: 338 IAALDGQNLDGRAIRV 353
+ ++ + L G+ IR+
Sbjct: 69 LDTMNFEMLKGQPIRI 84
>gi|238011394|gb|ACR36732.1| unknown [Zea mays]
Length = 149
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + +AI
Sbjct: 8 YRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 GMNGKELDGRNITVNEAQ 85
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F G E+ E K +I +
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYG--EVLESK------------------------IILD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT ST E A+E + ++DGR +TVN+A
Sbjct: 43 RETQRSRGFGFVTFSTEEAMRNAIEGMNGKELDGRNITVNEA 84
>gi|219888685|gb|ACL54717.1| unknown [Zea mays]
gi|414869098|tpg|DAA47655.1| TPA: glycine-rich protein1 [Zea mays]
Length = 144
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + +AI
Sbjct: 8 YRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 GMNGKELDGRNITVNEAQ 85
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F G E+ E K +I +
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYG--EVLESK------------------------IILD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT ST E A+E + ++DGR +TVN+A
Sbjct: 43 RETQRSRGFGFVTFSTEEAMRNAIEGMNGKELDGRNITVNEA 84
>gi|195612516|gb|ACG28088.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|414869096|tpg|DAA47653.1| TPA: glycine-rich protein1 isoform 1 [Zea mays]
gi|414869097|tpg|DAA47654.1| TPA: glycine-rich protein1 isoform 2 [Zea mays]
Length = 155
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + +AI
Sbjct: 8 YRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 GMNGKELDGRNITVNEAQ 85
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F G E+ E K +I +
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYG--EVLESK------------------------IILD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT ST E A+E + ++DGR +TVN+A
Sbjct: 43 RETQRSRGFGFVTFSTEEAMRNAIEGMNGKELDGRNITVNEA 84
>gi|195609654|gb|ACG26657.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612080|gb|ACG27870.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612572|gb|ACG28116.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + +AI
Sbjct: 8 YRCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 GMNGKELDGRNITVNEAQ 85
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F G E+ E K +I +
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYG--EVLESK------------------------IILD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT ST E A+E + ++DGR +TVN+A
Sbjct: 43 RETQRSRGFGFVTFSTEEAMRNAIEGMNGKELDGRNITVNEA 84
>gi|402882426|ref|XP_003904744.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 614
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 41/215 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NLP DVD + L LF + G +L V R
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFG----------------------------KMLSVKVMR 224
Query: 222 E-TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE--- 277
+ + SR FGFV EEA+KAV + ++ GRLL +A R + R FE
Sbjct: 225 DNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMK 284
Query: 278 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +YV NL +D+ +L + FS +G + +A+V+ E G S+GFGFV SS
Sbjct: 285 QDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSS 342
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 343 PEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML+EK F G + ++V
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEK--------------FSPAG---------PILSIRVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + + G+ + + + +R P + + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++ +VV D E G SRGFGFV + AI
Sbjct: 98 VGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCD-EHG-SRGFGFVHFETHEAAQQAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + R+ R
Sbjct: 156 NTMNGMLLNDRKVFVGHFKSRRER 179
>gi|224094731|ref|XP_002310211.1| predicted protein [Populus trichocarpa]
gi|222853114|gb|EEE90661.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 34/206 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DA +VGNL V E L LF +AG V +++V
Sbjct: 4 QDATAYVGNLDPQVSEELLWELFVQAGPV---------------VNVYVPK--------- 39
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+R T+ +G+GFV + E+A+ A+++ + + G+ + VNKA+ + + +
Sbjct: 40 --DRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-------QDKKSLD 90
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVV-NARVVYDRETGRSRGFGFVTMSSETELND 336
G +++GNL +VD L FS G +V N +++ D ETG SRGFGF++ S +
Sbjct: 91 VGANLFIGNLDPDVDEKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDA 150
Query: 337 AIAALDGQNLDGRAIRVNVAEDRQRR 362
AI A++GQ L R I V+ A + +
Sbjct: 151 AIEAMNGQYLCNRQITVSYAYKKDTK 176
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF+GNL DVD + L F G + V+ +++
Sbjct: 93 ANLFIGNLDPDVDEKLLHDTFSAFGVI-------------------------VTNPKIMR 127
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+ ET SRGFGF++ + E ++ A+E + + R +TV+ A + T+ ER
Sbjct: 128 DPETGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 179
>gi|298710527|emb|CBJ25591.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 502
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 34/209 (16%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTV-EIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+ KLF+G + + E L F K GT+ +IA +K
Sbjct: 147 EGKLFIGGISWQTTEEGLRHHFGKYGTLADIALMK------------------------- 181
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
++ T RGFGF+ + ++ + H+ IDG+++ V +A P+ P + R
Sbjct: 182 --DKYTGHPRGFGFIKFEDITVLDEILSQEHK--IDGKVVDVKRAVPKSEAPGPSSRSSR 237
Query: 278 PG--FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
P +I+VG L V A + F G VV+A V++DR+T RSRGFGFVT + ++
Sbjct: 238 PAETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVH 297
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
D + + ++G+ + V AE ++ RS
Sbjct: 298 DIM--MGTHEINGKMVEVKRAEPKENRSG 324
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 28/119 (23%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P E K+FVG L A TV +AE + +F + F V AV
Sbjct: 238 PAETNKIFVGGL---------------APTVMMAEFRKYF----ETFGGVVDAV------ 272
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
V+++R+T RSRGFGFVT E+A M ++I+G+++ V +A P+ + RAPR
Sbjct: 273 -VMFDRQTQRSRGFGFVTFQ--EDAVVHDIMMGTHEINGKMVEVKRAEPKENRSGRAPR 328
>gi|355563109|gb|EHH19671.1| Polyadenylate-binding protein 1-like protein [Macaca mulatta]
Length = 614
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 41/215 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NLP DVD + L LF + G +L V R
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFG----------------------------KMLSVKVMR 224
Query: 222 E-TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE--- 277
+ + SR FGFV EEA+KAV + ++ GRLL +A R + R FE
Sbjct: 225 DNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMK 284
Query: 278 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +YV NL +D+ +L + FS +G + +A+V+ E G S+GFGFV SS
Sbjct: 285 QDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSS 342
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 343 PEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML+EK F G + ++V
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEK--------------FSPAG---------PILSIRVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + + G+ + + + +R P + + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++ +VV D E G SRGFGFV + AI
Sbjct: 98 VGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCD-EHG-SRGFGFVHFETHEAAQQAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + R+ R
Sbjct: 156 NTMNGMLLNDRKVFVGHFKSRRER 179
>gi|302565150|ref|NP_001181379.1| polyadenylate-binding protein 1-like [Macaca mulatta]
Length = 614
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 41/215 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NLP DVD + L LF + G +L V R
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFG----------------------------KMLSVKVMR 224
Query: 222 E-TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE--- 277
+ + SR FGFV EEA+KAV + ++ GRLL +A R + R FE
Sbjct: 225 DNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMK 284
Query: 278 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +YV NL +D+ +L + FS +G + +A+V+ E G S+GFGFV SS
Sbjct: 285 QDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSS 342
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 343 PEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML+EK F G + ++V
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEK--------------FSPAG---------PILSIRVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + + G+ + + + +R P + + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++ +VV D E G SRGFGFV + AI
Sbjct: 98 VGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCD-EHG-SRGFGFVHFETHEAAQQAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + R+ R
Sbjct: 156 NTMNGMLLNDRKVFVGHFKSRRER 179
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 105/224 (46%), Gaps = 44/224 (19%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
EE E +FVG L + + +E L FE G + A
Sbjct: 279 EEAAGSTEIKNVFVGGLSWGITNESLQEAFESCGEIVSA--------------------- 317
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR----- 265
+V+ +RET +SRGFG+V A+ A+EM ++DGR + V+ +APR
Sbjct: 318 -----RVVTDRETGKSRGFGYVDFVDAAGAKAALEMAG-TELDGRTINVDLSAPRPPRDG 371
Query: 266 -GTQPERA--PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
G P++ + P ++VGNL +E + + FS+ G V + RV D ETGR +G
Sbjct: 372 PGATPKKQFNDELSAPSQTVFVGNLSFESTQDAVWESFSDFGGVNSVRVPTDMETGRPKG 431
Query: 323 FGFVTMSSETELNDAIAALD------GQNLDGRAIRVNVAEDRQ 360
F +V +++ A A+D G +DGR +R++ ++ RQ
Sbjct: 432 FAYVEFG---DVDSAKKAVDQGRSSEGLEIDGRRVRLDFSQPRQ 472
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++VG L W + N L++ F G++V+ARVV DRETG+SRGFG+V + A AAL
Sbjct: 290 VFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDF---VDAAGAKAAL 346
Query: 342 D--GQNLDGRAIRVNVAEDRQRR 362
+ G LDGR I V+++ R R
Sbjct: 347 EMAGTELDGRTINVDLSAPRPPR 369
>gi|406868018|gb|EKD21055.1| RNA binding domain containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 426
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 34/215 (15%)
Query: 152 EFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFY 211
E V P ++VGNL +D+ E + FE G ++ + N+G
Sbjct: 223 ERVLPAPSNSIYVGNLLFDITQEDIQREFESFGPIKSVTIASD----NRGL--------- 269
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
S+GFG+V ++E+A A+E ++ ++GR L VN P
Sbjct: 270 --------------SKGFGYVEFESIEQATAAIEGKNQAVLEGRRLVVNYMNKSQRSPAG 315
Query: 272 APRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFG---FVTM 328
A V EP +++GNL +E+ +A L ++F + V++ RV DR TG+ RGF FV +
Sbjct: 316 AEPVNEPSKTLFIGNLAFEMSDADLNKLFRDIRNVIDVRVAIDRRTGQPRGFAHADFVDV 375
Query: 329 SSETELNDAIAALDGQNLDGRAIRVNV-AEDRQRR 362
S + D AL G+ + GR +R++ A R RR
Sbjct: 376 ESAIKGKD---ALLGKEVYGRTLRIDFSAGIRDRR 407
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 267 TQPERAPRVF-EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 325
T+P RV P IYVGNL +++ +++ F G + + + D G S+GFG+
Sbjct: 217 TRPAYPERVLPAPSNSIYVGNLLFDITQEDIQREFESFGPIKSVTIASDNR-GLSKGFGY 275
Query: 326 VTMSSETELNDAIAALDGQN---LDGRAIRVNVAEDRQR 361
V S + A AA++G+N L+GR + VN QR
Sbjct: 276 VEFES---IEQATAAIEGKNQAVLEGRRLVVNYMNKSQR 311
>gi|319765042|ref|YP_004128979.1| rnp-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|330827234|ref|YP_004390537.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
gi|317119603|gb|ADV02092.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans BC]
gi|329312606|gb|AEB87021.1| RNP-1 like RNA-binding protein [Alicycliphilus denitrificans K601]
Length = 144
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 58/84 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + LEQ F + G V +A+V+ +R+TGRS+GFGFV M S+ + AI
Sbjct: 2 GNKLYVGNLPYSVRDQDLEQAFGQFGVVTSAKVMMERDTGRSKGFGFVEMGSDADAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ+L GR+I VN A + R
Sbjct: 62 NGMNGQSLGGRSIVVNEARPMEPR 85
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 26/112 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V + L F + G V A +V+
Sbjct: 4 KLYVGNLPYSVRDQDLEQAFGQFGVVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 272
R+T RS+GFGFV M + +A+ A+ + + GR + VN+A P +P R+
Sbjct: 38 RDTGRSKGFGFVEMGSDADAQAAINGMNGQSLGGRSIVVNEARPMEPRPPRS 89
>gi|169853086|ref|XP_001833224.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|116505602|gb|EAU88497.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 681
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 38/211 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
L+V NL +V ++ LF+K G V A VI
Sbjct: 232 LYVKNLDPEVTQDEFIELFKKYGNVTSA---------------------------VISVD 264
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
E +S+GFGFV T +EA+KAV+ + +++ G+ L V++A + + E R +E
Sbjct: 265 EEGKSKGFGFVNFETHDEAQKAVDELNDFELKGKKLFVSRAQKKAEREEELRRSYEQAKL 324
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +Y+ NL +VD+ +L F G + + +V+ D E G+S+GFGFV SS
Sbjct: 325 EKLSKYQGVNLYIKNLEDDVDDDKLRAEFEPFGTITSCKVMRD-EKGQSKGFGFVCFSSP 383
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
E A+A ++ + + + + V++A+ R+ R
Sbjct: 384 DEATKAVAEMNNKMIGTKPLYVSLAQRREVR 414
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 208 AVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT 267
A F L + ET RS+G+GFV T E AE A++ + ++ + + V R
Sbjct: 158 AAFGTVLSCKVATDETGRSKGYGFVHYETAEAAENAIKAVNGMLLNDKKVYVGHHISRKE 217
Query: 268 QPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
+ + + +YV NL EV ++F ++G V +A + D E G+S+GFGFV
Sbjct: 218 RQSKLEEMRAQFTNLYVKNLDPEVTQDEFIELFKKYGNVTSAVISVDEE-GKSKGFGFVN 276
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
+ E A+ L+ L G+ + V+ A+ + R
Sbjct: 277 FETHDEAQKAVDELNDFELKGKKLFVSRAQKKAER 311
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 9/154 (5%)
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
V+ ++V + T RS G+ +V + E+A+E + I R + + +R
Sbjct: 75 VASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQLNYSLIKNRPCRIMWS-------QR 127
Query: 272 APRVFEPG-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
P + + G I++ NL +DN L F+ G V++ +V D ETGRS+G+GFV +
Sbjct: 128 DPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFGTVLSCKVATD-ETGRSKGYGFVHYET 186
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
+AI A++G L+ + + V R+ R S
Sbjct: 187 AEAAENAIKAVNGMLLNDKKVYVGHHISRKERQS 220
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P +YVG L V A L ++F+ G V + RV D T RS G+ +V + + A
Sbjct: 47 PSASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERA 106
Query: 338 IAALDGQNLDGRAIRV 353
+ L+ + R R+
Sbjct: 107 LEQLNYSLIKNRPCRI 122
>gi|428779944|ref|YP_007171730.1| RRM domain-containing RNA-binding protein [Dactylococcopsis salina
PCC 8305]
gi|428694223|gb|AFZ50373.1| RRM domain-containing RNA-binding protein [Dactylococcopsis salina
PCC 8305]
Length = 95
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNL + V L +VF+E+G V + DRETGR RGFGFV M+SETE ++AI+ L
Sbjct: 3 IYVGNLDYSVTQDDLSEVFAEYGTVKRVHLPTDRETGRMRGFGFVEMASETEESNAISEL 62
Query: 342 DGQNLDGRAIRVNVAEDRQRRSSF 365
DG GR ++VN A R+ +SSF
Sbjct: 63 DGAEWMGRELKVNPARPRENKSSF 86
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNL Y V + L+ +F + GTV+ + + +R
Sbjct: 3 IYVGNLDYSVTQDDLSEVFAEYGTVK--------------------------RVHLPTDR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET R RGFGFV M++ E A+ + GR L VN A PR
Sbjct: 37 ETGRMRGFGFVEMASETEESNAISELDGAEWMGRELKVNPARPR 80
>gi|392593257|gb|EIW82582.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 136
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 51/78 (65%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNL W + L F +G V ++ V+ DRETGRSRGFGFVT ++ E N A+
Sbjct: 2 GSKLYVGNLSWSTGDDGLRNAFGRYGAVTDSIVMRDRETGRSRGFGFVTFTTAEEANAAM 61
Query: 339 AALDGQNLDGRAIRVNVA 356
+D LDGR IRVNVA
Sbjct: 62 GQMDQTELDGRTIRVNVA 79
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+KL+VGNL + + L F + G V + V+
Sbjct: 3 SKLYVGNLSWSTGDDGLRNAFGRYGAVTDS--------------------------IVMR 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RSRGFGFVT +T EEA A+ + ++DGR + VN A +
Sbjct: 37 DRETGRSRGFGFVTFTTAEEANAAMGQMDQTELDGRTIRVNVANAK 82
>gi|212274429|ref|NP_001130902.1| uncharacterized protein LOC100192006 [Zea mays]
gi|194690404|gb|ACF79286.1| unknown [Zea mays]
gi|413934109|gb|AFW68660.1| hypothetical protein ZEAMMB73_687460 [Zea mays]
Length = 357
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 98/200 (49%), Gaps = 34/200 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DA +VGNL V E L LF +AG V V+ V
Sbjct: 23 QDATTYVGNLDPQVSEELLWELFVQAGPV--------------------VNVY------V 56
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+R T+ +G+GFV + E+A+ A++ + + G+ + VNKA+ + + +
Sbjct: 57 PKDRVTNLHQGYGFVEFRSEEDADYAIKTLNMIKLYGKPIRVNKAS-------QDKKSLD 109
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVV-NARVVYDRETGRSRGFGFVTMSSETELND 336
G +++GNL +VD L FS G +V N +++ D ETG SRGFGFV+ S +
Sbjct: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYESFESSDQ 169
Query: 337 AIAALDGQNLDGRAIRVNVA 356
AI A++ Q+L R I V+ A
Sbjct: 170 AIEAMNNQHLCNRPITVSYA 189
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 283 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 342
YVGNL +V L ++F + G VVN V DR T +G+GFV SE + + AI L+
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKTLN 87
Query: 343 GQNLDGRAIRVNVAEDRQR 361
L G+ IRVN A ++
Sbjct: 88 MIKLYGKPIRVNKASQDKK 106
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 28/134 (20%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF+GNL DVD + L F G + V+ +++
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVI-------------------------VTNPKIMR 146
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ ET SRGFGFV+ + E +++A+E + + R +TV+ A + T+ ER P
Sbjct: 147 DPETGNSRGFGFVSYESFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKGERH---GTPA 203
Query: 280 FRIYVGNLPWEVDN 293
R+ N P N
Sbjct: 204 ERLLAANNPGSQKN 217
>gi|395526571|ref|XP_003765434.1| PREDICTED: polyadenylate-binding protein 4 [Sarcophilus harrisii]
Length = 630
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 46/237 (19%)
Query: 138 RQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLF 197
R+E E G + +EF +++ N D+D E+L LF K G
Sbjct: 176 RKEREAELGA-KAKEFTN------VYIKNFGDDMDDERLKELFSKYGK------------ 216
Query: 198 GNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL 257
+L + + +S+GFGFV+ E+A KAVE + DI+G+++
Sbjct: 217 ---------------TLSVKVMTDSSGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMV 261
Query: 258 TVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVV 307
V +A + + R FE G +Y+ NL +D+ +L + FS G +
Sbjct: 262 FVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSIT 321
Query: 308 NARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
+A+V+ E GRS+GFGFV SS E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 322 SAKVML--EDGRSKGFGFVCFSSPDEATKAVTEMNGRIVGSKPLYVALAQRKEERKA 376
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 82/145 (56%), Gaps = 13/145 (8%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR---- 281
S+G+ FV T + A++A+E + ++ R + V G R R E G +
Sbjct: 137 SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFV------GRFKSRKEREAELGAKAKEF 190
Query: 282 --IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+Y+ N ++D+ RL+++FS++GK ++ +V+ D +G+S+GFGFV+ + N A+
Sbjct: 191 TNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTD-SSGKSKGFGFVSFEKHEDANKAVE 249
Query: 340 ALDGQNLDGRAIRVNVAEDRQRRSS 364
++G++++G+ + V A+ + R +
Sbjct: 250 EMNGKDINGKMVFVGRAQKKVERQA 274
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P +YVG+L +V A L + FS G V++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 338 IAALDGQNLD---GRAIRV 353
ALD N D G+ IR+
Sbjct: 66 ERALDTMNFDVIKGKPIRI 84
>gi|410077429|ref|XP_003956296.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
gi|372462880|emb|CCF57161.1| hypothetical protein KAFR_0C01680 [Kazachstania africana CBS 2517]
Length = 479
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 37/203 (18%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
++ K+F+G L ++ E L F K G +V+ L++
Sbjct: 92 DNCKMFIGGLNWETTEETLRDYFNKYG--------------------------HVTDLKI 125
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+ + T RSRGFGF+T ++ V+ H +DG+++ ++ PR Q +
Sbjct: 126 MKDSNTGRSRGFGFLTFEHPSSVDEVVKTQHI--LDGKVIDPKRSIPREEQDKTG----- 178
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
+I+VG + +V E+ FS++G +++A+++ D++TGRSRGFGFVT S + D
Sbjct: 179 ---KIFVGGIGADVRPKEFEEFFSQYGNIIDAQLMLDKDTGRSRGFGFVTYDSPDAV-DR 234
Query: 338 IAALDGQNLDGRAIRVNVAEDRQ 360
+ G+ I + A+ R
Sbjct: 235 VCQSKYIEFKGKQIEIKRAQPRH 257
>gi|88811230|ref|ZP_01126486.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gi|88791769|gb|EAR22880.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 94
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNLP+ L ++F+ +G V + R++ DR+TGR RGFGFVTM S+T+ AI AL
Sbjct: 4 IYVGNLPFSASEDELRELFAAYGNVDSVRLMTDRDTGRPRGFGFVTM-SDTDAASAIEAL 62
Query: 342 DGQNLDGRAIRVNVAEDRQRRSS 364
DG++ GR +RVN A++R+ R S
Sbjct: 63 DGKDFGGRNLRVNEAQERKERPS 85
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 27/113 (23%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNLP+ ++L LF G V+ ++++ +R
Sbjct: 4 IYVGNLPFSASEDELRELFAAYGNVDS--------------------------VRLMTDR 37
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
+T R RGFGFVTMS + A A+E D GR L VN+A R +P PR
Sbjct: 38 DTGRPRGFGFVTMSDTDAAS-AIEALDGKDFGGRNLRVNEAQERKERPSGGPR 89
>gi|2645699|gb|AAC61787.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 165
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 55/78 (70%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W + L++ FS +G++++++++ DRETGRSRGFGFVT ++E + DAI
Sbjct: 7 YRCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKSMRDAIQ 66
Query: 340 ALDGQNLDGRAIRVNVAE 357
++ Q LDGR VN A+
Sbjct: 67 GMNSQELDGRNTTVNEAQ 84
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
++I +RET RSRGFGFVT + + A++ + ++DGR TVN+A
Sbjct: 37 KIINDRETGRSRGFGFVTFNNEKSMRDAIQGMNSQELDGRNTTVNEA 83
>gi|326931817|ref|XP_003212020.1| PREDICTED: embryonic polyadenylate-binding protein-like [Meleagris
gallopavo]
Length = 633
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 12/153 (7%)
Query: 223 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----- 277
T RS+GFGFV EEA+KAV + +I+GR++ V +A R + R FE
Sbjct: 227 TGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRMVYVGRAQKRLERQSELKRKFEQMKQE 286
Query: 278 -----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
G +YV NL +D+ RL + FS +G + +A+V+ E G S+GFGFV SS
Sbjct: 287 RVSRYQGVNLYVKNLDDGIDDERLRKEFSPYGTITSAKVM--TEGGHSKGFGFVCFSSPE 344
Query: 333 ELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 345 EATKAVTEMNGRIVSTKPLYVALAQRKEERKAI 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 76/145 (52%), Gaps = 13/145 (8%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR---- 281
SRG GFV T E A +A+E + ++ R + V G R R E G R
Sbjct: 137 SRGHGFVHFETQEAATRAIETMNGMLLNDRKVFV------GHFKSRKEREAEFGARAMEF 190
Query: 282 --IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+Y+ N ++D+ RL ++FS GK ++ +V+ D TGRS+GFGFV E A+A
Sbjct: 191 TNVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMD-NTGRSKGFGFVNFEKHEEAQKAVA 249
Query: 340 ALDGQNLDGRAIRVNVAEDRQRRSS 364
++G+ ++GR + V A+ R R S
Sbjct: 250 DMNGKEINGRMVYVGRAQKRLERQS 274
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML+EK F G + + + + +
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEK--------------FSPAG------PILSIRVCRDVA 47
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+R RS G+ ++ +AE+A++ + I GR + + + +R P + + G
Sbjct: 48 SR---RSLGYAYINFQQPADAERALDTMNFEVIKGRPVRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN L FS G +++ +VV D E G SRG GFV ++ AI
Sbjct: 98 VGNVFIKNLDDSIDNKALYDTFSAFGNILSCKVVCD-ENG-SRGHGFVHFETQEAATRAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + R+ R
Sbjct: 156 ETMNGMLLNDRKVFVGHFKSRKER 179
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 278 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
PG+ +YVG+L +V A L + FS G +++ RV D + RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADA 65
Query: 335 NDAIAALDGQNLDGRAIRV 353
A+ ++ + + GR +R+
Sbjct: 66 ERALDTMNFEVIKGRPVRI 84
>gi|212276175|ref|NP_001130201.1| hypothetical protein [Zea mays]
gi|194688532|gb|ACF78350.1| unknown [Zea mays]
gi|414887483|tpg|DAA63497.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
gi|414887484|tpg|DAA63498.1| TPA: hypothetical protein ZEAMMB73_917992 [Zea mays]
Length = 308
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 55/79 (69%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L + D L+ FSE G V+ AR++ DRE+GRSRGFGF+T +S E + A+ +
Sbjct: 33 KLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEASAAMTS 92
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG+ L GR IRVN A +R
Sbjct: 93 MDGKELQGRNIRVNHANER 111
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 26/112 (23%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
V +KLFVG L + D L F + G V A
Sbjct: 26 VRCMSSSKLFVGGLSFATDETTLKDAFSEFGNVLEA------------------------ 61
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
++I +RE+ RSRGFGF+T ++ EEA A+ ++ GR + VN A R
Sbjct: 62 --RIIIDRESGRSRGFGFITFTSTEEASAAMTSMDGKELQGRNIRVNHANER 111
>gi|357460829|ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355489744|gb|AES70947.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 379
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 34/206 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DA +VGNL + E L LF +AG V +++V
Sbjct: 23 QDATAYVGNLDPQISEELLWELFVQAGPV---------------VNVYVPK--------- 58
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+R T++ +G+GFV + E+A+ A+++ + + G+ + VNKA+ + + +
Sbjct: 59 --DRVTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-------QDKKSLD 109
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVV-NARVVYDRETGRSRGFGFVTMSSETELND 336
G +++GNL +VD L FS G +V N +++ D +TG SRGFGF++ S +
Sbjct: 110 VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDS 169
Query: 337 AIAALDGQNLDGRAIRVNVAEDRQRR 362
AI A++GQ L R I V+ A + +
Sbjct: 170 AIEAMNGQYLCNRQITVSYAYKKDTK 195
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LF+GNL DVD + L F G + V+ +++
Sbjct: 112 ANLFIGNLDPDVDEKLLYDTFSAFGVI-------------------------VTNPKIMR 146
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+ +T SRGFGF++ + E ++ A+E + + R +TV+ A + T+ ER
Sbjct: 147 DPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
>gi|313229163|emb|CBY23748.1| unnamed protein product [Oikopleura dioica]
Length = 570
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 37/213 (17%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFV NLP D++ L FE+ G EV H +VI +
Sbjct: 184 LFVKNLPDSWDTDALLKNFEQFG-----EVVSH---------------------KVICDE 217
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP--- 278
T S+ GF++ ++AE AVE+ H +I+G+ L +A + + +E
Sbjct: 218 TTGLSKCHGFISFKEHDQAEAAVEIMHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQ 277
Query: 279 -------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL +D+ L + F + G + +A+V+ D GRS+GFGFV SS
Sbjct: 278 ERIQRYQGVNLYVKNLDDSIDDEGLREAFKQFGNITSAKVITDL-NGRSKGFGFVCFSSP 336
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
E A+ ++G+ G+ + V +A+ ++ R +
Sbjct: 337 EEATKAVTEMNGRIFGGKPLYVGLAQRKEDRKA 369
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 28/203 (13%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+F+ NL +D++ L F G + +V VC +
Sbjct: 92 VFIKNLDRSIDNKALYDTFSSFGNILSCKV--------------VCDI------------ 125
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
+ S+GFGFV + E A++A+E + ++ + + V + R + +
Sbjct: 126 --NGSKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARFKSRNDRMREFGDAAKHFTN 183
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++V NLP D L + F + G+VV+ +V+ D TG S+ GF++ + A+ +
Sbjct: 184 LFVKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVEIM 243
Query: 342 DGQNLDGRAIRVNVAEDRQRRSS 364
+ ++G+ + A+ + RSS
Sbjct: 244 HEKEIEGKKLYCGRAQKKAERSS 266
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVG+L ++ A L F G V++ RV D T RS G+ +V DA AL
Sbjct: 4 LYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPA---DAERAL 60
Query: 342 DGQNLD---GRAIRV 353
D N D G+ IR+
Sbjct: 61 DTMNFDVIKGKPIRI 75
>gi|443895761|dbj|GAC73106.1| polyadenylate-binding protein [Pseudozyma antarctica T-34]
Length = 556
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 211 YVSLLQVIYNRETD-RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
Y + + R+ D +S+GFGFV +EA+ AV+ H D G+ L V +A + +
Sbjct: 249 YGKITSCVLQRDEDGKSKGFGFVNFENHDEAQTAVDELHDSDFKGQKLFVARAQKKSERE 308
Query: 270 ERAPRVFEP----------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGR 319
E R +E G +Y+ N+P D+ RL F+ G + + +++ +G
Sbjct: 309 EELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLRDEFAPFGAITSCKIM-RAPSGV 367
Query: 320 SRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
SRGFGFV S+ E N A++ ++G+ LD R + V +A+ + R
Sbjct: 368 SRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALAQRKDVR 410
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 7/140 (5%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR---I 282
S G+GFV T E A+ A++ + ++ + + V PR ER ++ E R +
Sbjct: 172 SLGYGFVHYETAEAADAAIKHVNGMLLNDKKVYVGHHIPR---KERQAKIEESRARFTNV 228
Query: 283 YVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALD 342
Y N+ +V + E++F+++GK+ + + D E G+S+GFGFV + E A+ L
Sbjct: 229 YCKNVDADVTDEEFEKLFTKYGKITSCVLQRD-EDGKSKGFGFVNFENHDEAQTAVDELH 287
Query: 343 GQNLDGRAIRVNVAEDRQRR 362
+ G+ + V A+ + R
Sbjct: 288 DSDFKGQKLFVARAQKKSER 307
>gi|442555271|ref|YP_007365096.1| RNA recognition domain-containing protein [Lawsonia intracellularis
N343]
gi|441492718|gb|AGC49412.1| RNA recognition domain-containing protein [Lawsonia intracellularis
N343]
Length = 88
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNLPW +++ +FSE+G V+ ++V DRETGR+RGFGFV M E AI AL
Sbjct: 5 IYVGNLPWSATEEQVQSLFSEYGHVMAVKLVSDRETGRARGFGFVEM-EEPGATAAIEAL 63
Query: 342 DGQNLDGRAIRVNVAEDRQRRS 363
D N GR +RVN A+ R R+
Sbjct: 64 DNANFGGRTLRVNEAKPRAPRA 85
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 30/113 (26%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNLP+ E++ LF + G +V ++++ +R
Sbjct: 5 IYVGNLPWSATEEQVQSLFSEYG--------------------------HVMAVKLVSDR 38
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
ET R+RGFGFV M A A+E + GR L VN+A PR RAPR
Sbjct: 39 ETGRARGFGFVEMEE-PGATAAIEALDNANFGGRTLRVNEAKPRAP---RAPR 87
>gi|337281471|ref|YP_004620943.1| glycine-rich RNA binding protein [Ramlibacter tataouinensis TTB310]
gi|334732548|gb|AEG94924.1| Candidate glycine-rich RNA binding protein [Ramlibacter
tataouinensis TTB310]
Length = 128
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 58/85 (68%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ ++ +EQ FS+ G V +A+V+ +R+TGRS+GFGFV MSS E AI
Sbjct: 2 GNKLYVGNLPYSYRDSDMEQAFSQFGTVSSAKVMMERDTGRSKGFGFVEMSSPAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRRS 363
++GQ + GR + VN A + R+
Sbjct: 62 EGMNGQQIGGRGLVVNEARPMEPRT 86
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 49/104 (47%), Gaps = 26/104 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY + F + GTV A +V+
Sbjct: 4 KLYVGNLPYSYRDSDMEQAFSQFGTVSSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP 264
R+T RS+GFGFV MS+ EA+ A+E + I GR L VN+A P
Sbjct: 38 RDTGRSKGFGFVEMSSPAEAQAAIEGMNGQQIGGRGLVVNEARP 81
>gi|302769522|ref|XP_002968180.1| hypothetical protein SELMODRAFT_169811 [Selaginella moellendorffii]
gi|300163824|gb|EFJ30434.1| hypothetical protein SELMODRAFT_169811 [Selaginella moellendorffii]
Length = 296
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 38/209 (18%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P KLFV L ++ S+ L FE+ G +E
Sbjct: 30 PAHRKLFVRGLAWETTSQDLREAFEQFGEIEEGA-------------------------- 63
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA----APRGTQPERA 272
VI ++ T +SRGFGF+T ++ A++A++ + IDGR+ N A + G ++A
Sbjct: 64 VIIDKATGKSRGFGFITFKHMDSAQRALKEPSK-TIDGRITVCNLASVGTSGSGGTNDQA 122
Query: 273 PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
R ++Y+G L +E N L +FS++G++ V YD+ T +SRGF FVT +
Sbjct: 123 QR------KLYIGGLSYETSNETLLNIFSKYGEIEEGAVAYDKNTNKSRGFAFVTYKTVE 176
Query: 333 ELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
+AI + + ++GR + V +A + Q+
Sbjct: 177 AARNAIDDPN-KTIEGRHVIVKLAAEGQK 204
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 35/135 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL++G L Y+ +E L +F K G +E V Y+
Sbjct: 125 KLYIGGLSYETSNETLLNIFSKYGEIEEGAVA--------------------------YD 158
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-------APRGTQPERAP 273
+ T++SRGF FVT TVE A A++ ++ I+GR + V A AP+ + P + P
Sbjct: 159 KNTNKSRGFAFVTYKTVEAARNAIDDPNK-TIEGRHVIVKLAAEGQKEKAPQVSAPSQGP 217
Query: 274 RVFEPGFRIYVGNLP 288
+ +PG+ + N+P
Sbjct: 218 QA-QPGYNVVNPNIP 231
>gi|440640661|gb|ELR10580.1| hypothetical protein GMDG_04852 [Geomyces destructans 20631-21]
Length = 447
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 36/221 (16%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
VE LFVGNL +++D E L FE+ G + A
Sbjct: 186 VEDTGSKNLFVGNLSWNIDDEWLYREFEEFGEITGA------------------------ 221
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN------KAAPRGT 267
+VI +RE+ RS+GFG+V + +A A++ IDGR V+ AAP+
Sbjct: 222 --RVISDRESGRSKGFGYVEFANSADAAAALKAKKGALIDGREANVDFSTPRDNAAPKDR 279
Query: 268 QPERAPRVFEP----GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGF 323
RA + ++VGN+ +E + L + F HG VVN R+ D ++G +GF
Sbjct: 280 ANARAQTYGDAKNPESDTLFVGNISFEANEDMLGEAFGAHGTVVNVRLPTDMDSGNPKGF 339
Query: 324 GFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
G++T SS + +A+ + G ++ GR +R++ A R R +
Sbjct: 340 GYITFSSVEDAKNAMENMMGADVGGRPVRLDYATPRPERDA 380
>gi|393245114|gb|EJD52625.1| hypothetical protein AURDEDRAFT_111257 [Auricularia delicata
TFB-10046 SS5]
Length = 103
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 54/79 (68%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W + L F + G+++++ V+ DR+TGRSRGFGFVT S E + AI A
Sbjct: 4 KVYVGNLSWNTTDETLRSAFQDFGQILDSIVMRDRDTGRSRGFGFVTFGSPQEADSAIQA 63
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L+ Q LDGR I+VN+A R
Sbjct: 64 LNDQELDGRRIKVNLANAR 82
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+K++VGNL ++ E L F+ G + + V +
Sbjct: 3 SKVYVGNLSWNTTDETLRSAFQDFGQILDSIV--------------------------MR 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+R+T RSRGFGFVT + +EA+ A++ + ++DGR + VN A R
Sbjct: 37 DRDTGRSRGFGFVTFGSPQEADSAIQALNDQELDGRRIKVNLANAR 82
>gi|469071|dbj|BAA03742.1| RNA-binding glycine-rich protein-1b [Nicotiana sylvestris]
gi|295393565|gb|ADG03638.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 148
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+ +VG L W + L F +G+V++++++ DRETGRSRGFGFVT E + DAI
Sbjct: 6 YSCFVGGLAWATTDRTLADAFGTYGEVLDSKIINDRETGRSRGFGFVTFKDEKCMRDAIE 65
Query: 340 ALDGQNLDGRAIRVNVAEDR 359
++GQ LDGR+I VN A+ R
Sbjct: 66 GMNGQELDGRSITVNEAQAR 85
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT 267
++I +RET RSRGFGFVT + A+E + ++DGR +TVN+A RG+
Sbjct: 36 KIINDRETGRSRGFGFVTFKDEKCMRDAIEGMNGQELDGRSITVNEAQARGS 87
>gi|428203801|ref|YP_007082390.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
gi|427981233|gb|AFY78833.1| RRM domain-containing RNA-binding protein [Pleurocapsa sp. PCC
7327]
Length = 99
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
I++GNLP+EV L+QVF+++G V + R+ DRETGR RGF FV M +E E AI AL
Sbjct: 3 IFIGNLPYEVSEDDLKQVFADYGTVKSVRLPMDRETGRVRGFAFVEMDTEAEETAAIQAL 62
Query: 342 DGQNLDGRAIRVNVAEDRQ-RRSSF 365
DG GR+++V+ A R+ +RSSF
Sbjct: 63 DGAKWIGRSLKVSKARPREDKRSSF 87
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+F+GNLPY+V + L +F GTV+ +++ +R
Sbjct: 3 IFIGNLPYEVSEDDLKQVFADYGTVKS--------------------------VRLPMDR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET R RGF FV M T E A++ GR L V+KA PR
Sbjct: 37 ETGRVRGFAFVEMDTEAEETAAIQALDGAKWIGRSLKVSKARPR 80
>gi|406950086|gb|EKD80418.1| cp31AHv protein [uncultured bacterium]
Length = 122
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 54/76 (71%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG+L W + L+ FS+ G V +ARV+ DR TGRS+GFGFV MSS+ E A+A
Sbjct: 4 KLFVGSLAWATTDDSLQAFFSQAGTVSSARVITDRATGRSKGFGFVEMSSDEEAQKAVAE 63
Query: 341 LDGQNLDGRAIRVNVA 356
L+G+ LDGRAI VN A
Sbjct: 64 LNGKELDGRAIVVNEA 79
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 26/104 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG+L + + L F +AGTV A +VI +
Sbjct: 4 KLFVGSLAWATTDDSLQAFFSQAGTVSSA--------------------------RVITD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP 264
R T RS+GFGFV MS+ EEA+KAV + ++DGR + VN+A P
Sbjct: 38 RATGRSKGFGFVEMSSDEEAQKAVAELNGKELDGRAIVVNEARP 81
>gi|350633123|gb|EHA21489.1| hypothetical protein ASPNIDRAFT_125918 [Aspergillus niger ATCC
1015]
Length = 264
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 31/208 (14%)
Query: 155 EPPEDAK-LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
EPP + +F+GN+ YDV E L EK G VE K + N+G
Sbjct: 87 EPPTPKETVFIGNVFYDVTREDLKKAMEKYGVVE----KVVLVLDNRGI----------- 131
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAP 273
S+G+G+V +++ A++AV+ + +GR +TV + A R
Sbjct: 132 ------------SKGYGYVQFDSIDAAQRAVDALNMRLFEGRRVTV-QFAQNNVYHRR-- 176
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
++ P +Y+GNLP+E+ + L ++F + VV+ RV DR TG++RGF S +
Sbjct: 177 QLNAPTRTLYIGNLPFEMTDRDLNELFKDVQNVVDIRVAVDRRTGQARGFAHAEFVSTSS 236
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDRQR 361
A+A L+ + GR +R++ ++ R
Sbjct: 237 AKAAMAILENKLPYGRRLRLDYSKATSR 264
>gi|326477036|gb|EGE01046.1| RNA recognition motif-containing protein [Trichophyton equinum CBS
127.97]
Length = 300
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 38/212 (17%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
+P A ++VGN+ +D+ + L K G V + ++ ++G
Sbjct: 84 KPQPKATVYVGNILFDITAADLKEYASKYGKV----LGTRIIYDSRGL------------ 127
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP--RGTQPERA 272
SRGFG+V +VEEA+KA++ H + +GR L+VN A R QP+R
Sbjct: 128 -----------SRGFGYVRFESVEEAKKAIDEMHLSEYEGRKLSVNFAQVDLRDEQPQRK 176
Query: 273 PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
EP I+VGN+ +V + L +F + V + RV DR TG RGF T
Sbjct: 177 ---MEPTRTIFVGNIAHQVTDRDLHALFDDIPNVFDVRVAVDRRTGMPRGFAHAEF---T 230
Query: 333 ELNDAIAA---LDGQNLDGRAIRVNVAEDRQR 361
++ AIA L GQ GR +R++ + +R
Sbjct: 231 DVESAIAGFEMLKGQAPYGRPLRLDYSHSARR 262
>gi|118100597|ref|XP_417367.2| PREDICTED: embryonic polyadenylate-binding protein-like [Gallus
gallus]
Length = 632
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 12/154 (7%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
T RS+GFGFV EEA+KAV + +I+GR++ V +A R + R FE
Sbjct: 226 HTGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRMVYVGRAQKRLERQSELKRKFEQMKQ 285
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL +D+ RL + FS +G + +A+V+ E G S+GFGFV SS
Sbjct: 286 ERVSRYQGVNLYVKNLDDGIDDERLRKEFSPYGTITSAKVM--TEGGHSKGFGFVCFSSP 343
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 344 EEATKAVTEMNGRIVSTKPLYVALAQRKEERKAI 377
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%), Gaps = 13/145 (8%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR---- 281
SRG GFV T E A +A++ + ++ R + V G R R E G R
Sbjct: 137 SRGHGFVHFETQEAATRAIQTMNGMLLNDRKVFV------GHFKSRKEREAEFGARAMEF 190
Query: 282 --IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+Y+ N ++D+ RL ++FS GK ++ +V+ D TGRS+GFGFV E A+A
Sbjct: 191 TNVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMD-HTGRSKGFGFVNFEKHEEAQKAVA 249
Query: 340 ALDGQNLDGRAIRVNVAEDRQRRSS 364
++G+ ++GR + V A+ R R S
Sbjct: 250 DMNGKEINGRMVYVGRAQKRLERQS 274
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML+EK F G + + + + +
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEK--------------FSPAG------PILSIRVCRDVA 47
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+R RS G+ ++ +AE+A++ + I GR + + + +R P + + G
Sbjct: 48 SR---RSLGYAYINFQQPADAERALDTMNFEVIKGRPVRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN L FS G +++ +VV D E G SRG GFV ++ AI
Sbjct: 98 VGNVFIKNLDDSIDNKALYDTFSAFGNILSCKVVCD-ENG-SRGHGFVHFETQEAATRAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + R+ R
Sbjct: 156 QTMNGMLLNDRKVFVGHFKSRKER 179
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 278 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
PG+ +YVG+L +V A L + FS G +++ RV D + RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADA 65
Query: 335 NDAIAALDGQNLDGRAIRV 353
A+ ++ + + GR +R+
Sbjct: 66 ERALDTMNFEVIKGRPVRI 84
>gi|417399827|gb|JAA46899.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 370
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 39/206 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+++ N D+D E+L +F + G +I VK +
Sbjct: 192 VYIKNFGDDMDDERLKEVFSQYG--KIVSVK-------------------------VMTD 224
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP--- 278
+ +S+GFGFV+ T E A++AVE + DI G+++ V +A + + ++FE
Sbjct: 225 SSGKSKGFGFVSFDTHEAAQRAVEYMNGKDICGQMVFVGRAQKKAERQAELKQMFEQLKR 284
Query: 279 -------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G ++Y+ NL +D +L + FS G + +V+ E GRS+GFG + S
Sbjct: 285 ERFGRCRGVKLYIKNLDETIDEEQLRRAFSSFGSMSRVKVM--EEEGRSKGFGLICFSCP 342
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAE 357
E A+A ++GQ L +AI + +A+
Sbjct: 343 EEATKAMAEMNGQVLGSKAINIALAQ 368
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 80/144 (55%), Gaps = 11/144 (7%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNK--AAPRGTQPERAPRVFEPG---F 280
SRG+ FV + A++A+E +++G LL + P + ER +
Sbjct: 136 SRGYAFVHFQSQSAADRAIE-----EMNGALLKNCRLFVGPFKNRKEREAELQNKANEFT 190
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+Y+ N ++D+ RL++VFS++GK+V+ +V+ D +G+S+GFGFV+ + A+
Sbjct: 191 NVYIKNFGDDMDDERLKEVFSQYGKIVSVKVMTD-SSGKSKGFGFVSFDTHEAAQRAVEY 249
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSS 364
++G+++ G+ + V A+ + R +
Sbjct: 250 MNGKDICGQMVFVGRAQKKAERQA 273
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+LP DV + L F G V + +C
Sbjct: 10 ASLYVGDLPADVTEDMLFRKFNPVGPV---------------LSIRICR----------- 43
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ +V + +A+K ++ + I G+ + R +R + + G
Sbjct: 44 DLVTRRSLGYAYVNFLNLADAQKVLDTMNFDMIQGK-------SIRLMWSQRDAYLRKSG 96
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN L + FS GK+++++V+ D + SRG+ FV S++ + AI
Sbjct: 97 IGNVFIKNLDRSIDNKMLYEHFSAFGKILSSKVMSDDKG--SRGYAFVHFQSQSAADRAI 154
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L + V ++R+ R
Sbjct: 155 EEMNGALLKNCRLFVGPFKNRKER 178
>gi|20257695|gb|AAM16013.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + AI
Sbjct: 12 YRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIE 71
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 72 GMNGKELDGRNITVNEAQ 89
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 26/114 (22%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCA 208
E EE + + FVG L + D L F G E+ E K
Sbjct: 1 EREEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYG--EVLESK---------------- 42
Query: 209 VFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+I +RET RSRGFGFVT ST + A+E + ++DGR +TVN+A
Sbjct: 43 --------IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEA 88
>gi|403335220|gb|EJY66784.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 307
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 33/199 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
++A L+VGNL V+ E + LF + G + V H +
Sbjct: 18 QEATLYVGNLDTKVNEELVWELFLQCGAI----VNVH----------------------I 51
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
++ T+ G+GFV T E+A+ A+++ H + G+ + VNKA+ + R E
Sbjct: 52 PRDKVTNEHSGYGFVEFKTEEDADYAIKIMHMVKLFGKPIKVNKAS-------QDKRTQE 104
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
G ++VGNL +VD L VFS G V++ +++ D ET S+ +GFV+ + + +
Sbjct: 105 VGANVFVGNLHEDVDEKMLRDVFSSFGIVLSTKIMRDPETQVSKRYGFVSYDNFESSDAS 164
Query: 338 IAALDGQNLDGRAIRVNVA 356
I A++GQ L G+ I V+ A
Sbjct: 165 IQAMNGQYLCGKPIDVSYA 183
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVGNL +V+ + ++F + G +VN + D+ T G+GFV +E + + AI +
Sbjct: 22 LYVGNLDTKVNEELVWELFLQCGAIVNVHIPRDKVTNEHSGYGFVEFKTEEDADYAIKIM 81
Query: 342 DGQNLDGRAIRVNVAEDRQR 361
L G+ I+VN A +R
Sbjct: 82 HMVKLFGKPIKVNKASQDKR 101
>gi|87308451|ref|ZP_01090592.1| RNA-binding protein [Blastopirellula marina DSM 3645]
gi|87289008|gb|EAQ80901.1| RNA-binding protein [Blastopirellula marina DSM 3645]
Length = 149
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 60/82 (73%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ ++ LE +F ++G+V +A V+ DRETGRSRGFGFV M+S+ + A
Sbjct: 2 GKKLYVGNLPYGYGSSELENLFGQYGQVASASVINDRETGRSRGFGFVEMASDGDALAAT 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQ 360
AL+G ++DGR + VN A +R+
Sbjct: 62 EALNGFDVDGRKLVVNEARERE 83
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY S +L LF + G V A VI +
Sbjct: 4 KLYVGNLPYGYGSSELENLFGQYGQVASA--------------------------SVIND 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET RSRGFGFV M++ +A A E + +D+DGR L VN+A R
Sbjct: 38 RETGRSRGFGFVEMASDGDALAATEALNGFDVDGRKLVVNEARER 82
>gi|226491121|ref|NP_001143351.1| uncharacterized protein LOC100275970 [Zea mays]
gi|195618716|gb|ACG31188.1| hypothetical protein [Zea mays]
Length = 295
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 55/79 (69%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L + D L+ FSE G V+ AR++ DRE+GRSRGFGF+T +S E + A+ +
Sbjct: 33 KLFVGGLSFATDETTLKDAFSEFGNVLEARIIIDRESGRSRGFGFITFTSTEEASAAMTS 92
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG+ L GR IRVN A +R
Sbjct: 93 MDGKELQGRNIRVNHANER 111
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 26/112 (23%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
V +KLFVG L + D L F + G V A
Sbjct: 26 VRCMSSSKLFVGGLSFATDETTLKDAFSEFGNVLEA------------------------ 61
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
++I +RE+ RSRGFGF+T ++ EEA A+ ++ GR + VN A R
Sbjct: 62 --RIIIDRESGRSRGFGFITFTSTEEASAAMTSMDGKELQGRNIRVNHANER 111
>gi|125597614|gb|EAZ37394.1| hypothetical protein OsJ_21732 [Oryza sativa Japonica Group]
Length = 344
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 33/201 (16%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K+FVG + ++ E FEK G + S ++ +
Sbjct: 29 KIFVGGVAWETTEESFTKHFEKYGAI--------------------------SDSVIMKD 62
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPG 279
+ T RGFGFVT S +K ++ H IDGR + V + PR + P+
Sbjct: 63 KHTKMPRGFGFVTFSDPSVIDKVLQDEH--TIDGRTVEVKRTVPREEMSSKDGPKTR--- 117
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+I+VG +P + +L++ FS +GKVV +++ D TGRSRGFGFVT +E + ++
Sbjct: 118 -KIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMS 176
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
+L G+ + + AE ++
Sbjct: 177 EGRMHDLAGKQVEIKKAEPKK 197
>gi|432865704|ref|XP_004070572.1| PREDICTED: embryonic polyadenylate-binding protein-like [Oryzias
latipes]
Length = 624
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 86/154 (55%), Gaps = 12/154 (7%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
E RSRGFGFV + E+A+KAV+ + +++G+++ V +A R + R F+
Sbjct: 226 EKGRSRGFGFVNYAHHEDAQKAVDEMNGKEMNGKIIYVGRAQKRLERQGELKRKFDQLKQ 285
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL +D+ RL + FS +G + +A+V+ E G+S+GFGFV SS
Sbjct: 286 DRIQRYQGVNLYVKNLDDSIDDERLRKEFSPYGTITSAKVM--TEAGQSKGFGFVCFSSP 343
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ R+ R +
Sbjct: 344 EEATKAVTEMNGRIVATKPLYVALAQRREERKAI 377
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 13/143 (9%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR---- 281
S+G+GFV T E A +A+E + ++ R + V G R R E G +
Sbjct: 137 SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFV------GHFKSRKEREVEFGTKVMKF 190
Query: 282 --IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
IY+ N + + +L++ FS GK ++ RV+ D E GRSRGFGFV + + A+
Sbjct: 191 TNIYIKNFGDNLTDEKLKEAFSAFGKTLSVRVMRD-EKGRSRGFGFVNYAHHEDAQKAVD 249
Query: 340 ALDGQNLDGRAIRVNVAEDRQRR 362
++G+ ++G+ I V A+ R R
Sbjct: 250 EMNGKEMNGKIIYVGRAQKRLER 272
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV L F AG + + VC +I
Sbjct: 11 ASLYVGDLHPDVTEAMLYQKFSPAGPI---------------VSIRVCR-------DII- 47
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
T RS G+ ++ +AE A++ + I GR + R +R P + + G
Sbjct: 48 ---TRRSLGYAYINFQQPADAECALDTMNYDVIKGRPI-------RIMWSQRDPALRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ N+ +DN L FS G +++ +VV D E G S+G+GFV ++ N AI
Sbjct: 98 VGNIFIKNIDDSIDNKALYDTFSAFGNILSCKVVCD-ERG-SKGYGFVHFETQEAANRAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + R+ R
Sbjct: 156 ETMNGMLLNDRKVFVGHFKSRKER 179
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 278 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
PG+ +YVG+L +V A L Q FS G +V+ RV D T RS G+ ++
Sbjct: 6 PGYPLASLYVGDLHPDVTEAMLYQKFSPAGPIVSIRVCRDIITRRSLGYAYINFQQPA-- 63
Query: 335 NDAIAALDGQNLD---GRAIRV 353
DA ALD N D GR IR+
Sbjct: 64 -DAECALDTMNYDVIKGRPIRI 84
>gi|46115998|ref|XP_384017.1| hypothetical protein FG03841.1 [Gibberella zeae PH-1]
Length = 1163
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL W + L F ++G+++++ V+ DR+TGRSRGFGFVT S E AI +
Sbjct: 4 KVYVGNLGWNTTDDSLRNAFQDYGQILDSIVMRDRDTGRSRGFGFVTFGSSQEAETAIIS 63
Query: 341 LDGQNLDGRAIRVNVAEDR 359
L+ Q LDGR I+VN+A R
Sbjct: 64 LNEQELDGRRIKVNLANAR 82
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
AK++VGNL ++ + L F+ G + + V+
Sbjct: 3 AKVYVGNLGWNTTDDSLRNAFQDYGQILDS--------------------------IVMR 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+R+T RSRGFGFVT + +EAE A+ + ++DGR + VN A R
Sbjct: 37 DRDTGRSRGFGFVTFGSSQEAETAIISLNEQELDGRRIKVNLANAR 82
>gi|255579005|ref|XP_002530354.1| conserved hypothetical protein [Ricinus communis]
gi|223530101|gb|EEF32015.1| conserved hypothetical protein [Ricinus communis]
Length = 534
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 85/170 (50%), Gaps = 18/170 (10%)
Query: 203 HMWVCAVFYVSL----LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 258
HM++ F V VIY++ T +SRG+GF+T +E + A+ + IDGRL
Sbjct: 279 HMFLAQAFRVHGEIEEGAVIYDKATGKSRGYGFITYKHMESTQIALRAPSKL-IDGRLAV 337
Query: 259 VNKAAP----RGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYD 314
N A T P+ A R ++Y+G L E+ + L F HG++ V YD
Sbjct: 338 CNLACEGLTGASTTPDLAQR------KLYIGGLSPEITSEMLLNFFGRHGEIEEGSVAYD 391
Query: 315 RETGRSRGFGFVTMSSETELNDAIAALDGQN-LDGRAIRVNVAEDRQRRS 363
++T SRGFGFVT + AI D Q L GR+I V +A+ + ++
Sbjct: 392 KDTNESRGFGFVTYKTVEAAKKAID--DPQKVLGGRSIIVKLADTHKGKT 439
>gi|20257689|gb|AAM16010.1| glycine-rich RNA binding protein [Zea mays]
Length = 147
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + AI
Sbjct: 10 YRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIE 69
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 70 GMNGKELDGRNITVNEAQ 87
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 26/112 (23%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
EE + + FVG L + D L F G E+ E K
Sbjct: 1 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYG--EVLESK------------------ 40
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+I +RET RSRGFGFVT ST + A+E + ++DGR +TVN+A
Sbjct: 41 ------IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEA 86
>gi|367006051|ref|XP_003687757.1| hypothetical protein TPHA_0K01910 [Tetrapisispora phaffii CBS 4417]
gi|357526062|emb|CCE65323.1| hypothetical protein TPHA_0K01910 [Tetrapisispora phaffii CBS 4417]
Length = 416
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 40/214 (18%)
Query: 154 VEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
E E A +FVG L + +D E L F+ G V A
Sbjct: 151 TEEGEPATIFVGRLSWSIDDEWLKNEFDHIGGVIGA------------------------ 186
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRL----LTVNKAAPRGTQP 269
+V+ R TDRSRG+G+V S AEKA++ H +IDGR ++ +K A
Sbjct: 187 --RVMLERGTDRSRGYGYVDFSDKSYAEKAIKEMHGKEIDGREINCDMSTSKPAGSNNGA 244
Query: 270 ERAPRV----FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 325
+RA + EP +++GNL + D + ++FS+ G++V+ R+ ET + +GFG+
Sbjct: 245 DRAKKFGDIPSEPSETLFLGNLSFNADRDSIWEMFSKFGEIVSVRLPTHPETEQPKGFGY 304
Query: 326 VTMSSETELNDAIAALD---GQNLDGRAIRVNVA 356
V + ++DA AL+ G+ +D R +R++ +
Sbjct: 305 VQYGN---IDDAKKALEALQGEYIDNRPVRLDYS 335
>gi|351703575|gb|EHB06494.1| Polyadenylate-binding protein 1-like protein [Heterocephalus
glaber]
Length = 605
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 100/215 (46%), Gaps = 41/215 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NL D+D + L LF F FG +L V R
Sbjct: 193 IYVKNLHVDMDEQGLQDLF--------------FEFGK--------------MLSVKVMR 224
Query: 222 E-TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE--- 277
+ + SRGFGFV EEA+KAV+ + ++ G+ L V +A RG + R FE
Sbjct: 225 DNSGHSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQQLYVGRAQKRGERQNELKRRFEQMK 284
Query: 278 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +YV NL + + +L VFS +G + +A+V+ E G S+GFGFV SS
Sbjct: 285 QDRQTRYQGVNLYVKNLDDSISDEKLRTVFSPYGVITSAKVM--TEGGHSKGFGFVCFSS 342
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G + + + V +A+ ++ R +
Sbjct: 343 PEEATKAVTEMNGCIVGTKPLYVALAQRKEERKAI 377
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 70/140 (50%), Gaps = 10/140 (7%)
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
++V + T RS G+ ++ +AE+A++ + I G+ + + + +R P
Sbjct: 40 IRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEVIKGQPIRIMWS-------QRDPG 92
Query: 275 VFEPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
+ + G +++ NL +D+ L FS G +++ +V D E G SRGFGFV +
Sbjct: 93 LRKSGVGNVFIKNLEDSIDSKALYDTFSTFGNILSCKVACD-EHG-SRGFGFVHFETNEA 150
Query: 334 LNDAIAALDGQNLDGRAIRV 353
AI+ ++G L+ R + V
Sbjct: 151 AQQAISTMNGMLLNDRKVFV 170
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P +YVG+L +V A L + FS G +++ RV D T RS G+ ++ + A
Sbjct: 9 PLSSLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERA 68
Query: 338 IAALDGQNLDGRAIRV 353
+ ++ + + G+ IR+
Sbjct: 69 LDTMNFEVIKGQPIRI 84
>gi|388515725|gb|AFK45924.1| unknown [Lotus japonicus]
Length = 290
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 105/244 (43%), Gaps = 48/244 (19%)
Query: 136 GERQEESGEEGVFE-EEEFVEPPE-----DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIA 189
GE+ + + VF+ EEE +PP+ +++V NLP ++ L LF+ GT+
Sbjct: 72 GEKSLNTQNDDVFKNEEEEQQPPQRRPRGPCEIYVCNLPRSCNAAHLLDLFKPYGTIISV 131
Query: 190 EVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHR 249
EV N ET SRG G+V M ++ A+ A+
Sbjct: 132 EVS--------------------------RNAETGESRGCGYVIMESINSAKSAIAALDG 165
Query: 250 YDIDGRLLTVN--------------KAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNAR 295
D+ GR L V A P+R +E ++YVGNL V +
Sbjct: 166 SDVGGRELRVKFSVEMSLERTDANANAGEMYASPKRT-FYYEAPHKLYVGNLARVVKPEQ 224
Query: 296 LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNV 355
L F G V++ RV++DR+ G++R + F++ SE E DA +L+G GR I V
Sbjct: 225 LRNHFIRFGNVLSVRVLHDRKQGKARVYAFLSFESEAE-RDAAMSLNGTEFYGRTIVVRE 283
Query: 356 AEDR 359
R
Sbjct: 284 GAQR 287
>gi|359322009|ref|XP_850457.3| PREDICTED: uncharacterized protein LOC483825 [Canis lupus
familiaris]
Length = 1009
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 111/235 (47%), Gaps = 21/235 (8%)
Query: 139 QEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFG 198
QE+S + E + +LFVG + + A L +AG +K FG
Sbjct: 283 QEQSAADRAIEHMNGAQL-RGCRLFVGR--FQSRQAREAELRSRAGEFTNLYIKN---FG 336
Query: 199 NQGFHMWVCAVF--YVSLLQV-IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGR 255
+ + AVF Y L V + + RSRGFGFV+ + E A +AVE + +DG+
Sbjct: 337 GRMDDARLRAVFSEYGKTLSVKVMTDASGRSRGFGFVSFESHEAARRAVEALNGRQVDGQ 396
Query: 256 LLTVNKAAPRGTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLEQVFSEHGK 305
L V +A + + R FE G ++YV NL VD RL + FS G
Sbjct: 397 PLFVGRAQRKAERQAELRRAFEQRQQDGLRRAQGAKLYVKNLDDAVDEDRLRREFSGFGA 456
Query: 306 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
V +RV RE GRS+GFG + SS E A+A ++G+ L + + + +A+ R+
Sbjct: 457 V--SRVKIMREEGRSKGFGLICFSSADEAARALAEMNGRVLGSKPLSIALAQSRR 509
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR-GTQPERAPRVFEPGF-RIY 283
SRG+ FV A++A+E + + G L V + R + E R E F +Y
Sbjct: 274 SRGYAFVHFQEQSAADRAIEHMNGAQLRGCRLFVGRFQSRQAREAELRSRAGE--FTNLY 331
Query: 284 VGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDG 343
+ N +D+ARL VFSE+GK ++ +V+ D +GRSRGFGFV+ S A+ AL+G
Sbjct: 332 IKNFGGRMDDARLRAVFSEYGKTLSVKVMTD-ASGRSRGFGFVSFESHEAARRAVEALNG 390
Query: 344 QNLDGRAIRVNVAEDRQRRSS 364
+ +DG+ + V A+ + R +
Sbjct: 391 RQVDGQPLFVGRAQRKAERQA 411
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 36/206 (17%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
A L+VG+L +V + L F AG V + +C
Sbjct: 146 RQASLYVGDLDAEVTEDALFRKFSAAGPV---------------LSIRICRDLL------ 184
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
T RS G+ +V + +A++A++ + + GR L R +R + +
Sbjct: 185 -----TRRSLGYAYVNFLRLADAQRALDTMNFDVLRGRPL-------RLMWSQRDAHLRK 232
Query: 278 PGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
G +++ NL VD+ L + FS GK+++++VV D E G SRG+ FV ++ +
Sbjct: 233 SGVGNVFIKNLDRSVDDKALFERFSAFGKILSSKVVSD-ERG-SRGYAFVHFQEQSAADR 290
Query: 337 AIAALDGQNLDGRAIRVNVAEDRQRR 362
AI ++G L G + V + RQ R
Sbjct: 291 AIEHMNGAQLRGCRLFVGRFQSRQAR 316
>gi|301763992|ref|XP_002917400.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 611
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 39/214 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NL DVD + L LF + G ++ VK +
Sbjct: 193 IYVKNLHVDVDEQGLQDLFSQFG--KMLSVK-------------------------VMRD 225
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
+ SRGFGFV EEA+KAV + ++ GRLL V +A R + R FE
Sbjct: 226 DIGHSRGFGFVNFEKHEEAQKAVMDMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQ 285
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL +D+ +L + FS +G + +A+V+ E G S+GFGFV SS
Sbjct: 286 DRATRYQGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSP 343
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 344 EEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML+EK F G + + +V
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEK--------------FSPAGPILSI---------RVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + I G+ + + + +R P + + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEVIKGQPVRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++ +VV D SRGFGFV + + AI
Sbjct: 98 VGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHG--SRGFGFVHFETHEAAHQAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
A ++G L+ R + V + R+ R
Sbjct: 156 ATMNGMLLNDRKVFVGHFKSRRER 179
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 278 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
PG+ +YVG+L +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 335 NDAIAALDGQNLDGRAIRV 353
A+ ++ + + G+ +R+
Sbjct: 66 ERALDTMNFEVIKGQPVRI 84
>gi|294933824|ref|XP_002780863.1| single-stranded G-strand telomeric DNA-binding protein, putative
[Perkinsus marinus ATCC 50983]
gi|239890990|gb|EER12658.1| single-stranded G-strand telomeric DNA-binding protein, putative
[Perkinsus marinus ATCC 50983]
Length = 381
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 25/169 (14%)
Query: 202 FHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNK 261
FH + V V+ ++ T R RGFGFVT +T E E + + ++G+ + VN+
Sbjct: 89 FHRYFSQFGNVERSIVMTDKMTGRCRGFGFVTYATTGEVENCLAN-GPHQLNGKHVDVNR 147
Query: 262 AAPRGTQPERAPR----------------VFEPGFRIYVGNLPWEVDNARLEQVFSEHGK 305
+ P+ A + + +++ G LP + D RL Q FS++G
Sbjct: 148 S----QDPKDAHKGGWGSDRSGGPSRRGGGGDDPKKVFCGGLPQDCDTERLRQHFSQYGN 203
Query: 306 VVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN-LDGRAIRV 353
+V+ + DR+TGRS+G+GFVT SE +N AA++G N +DGR + V
Sbjct: 204 IVDCIAMRDRDTGRSKGYGFVTFDSEDAVN---AAINGDNTIDGRWVEV 249
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 261 KAAPRGTQPE-----RAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDR 315
KA +G P R F+ +++VG +P + + FS+ G V + V+ D+
Sbjct: 49 KATEQGNTPSFSSGGHGDRGFDDRRQLFVGGIPEGFTDDDFHRYFSQFGNVERSIVMTDK 108
Query: 316 ETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 358
TGR RGFGFVT ++ E+ + +A Q L+G+ + VN ++D
Sbjct: 109 MTGRCRGFGFVTYATTGEVENCLANGPHQ-LNGKHVDVNRSQD 150
>gi|20257711|gb|AAM16021.1| glycine-rich RNA binding protein [Zea mays]
Length = 150
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + AI
Sbjct: 13 YRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIE 72
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 73 GMNGKELDGRNITVNEAQ 90
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 51/114 (44%), Gaps = 26/114 (22%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCA 208
E EE + + FVG L + D L F G E+ E K
Sbjct: 2 EREEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYG--EVLESK---------------- 43
Query: 209 VFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+I +RET RSRGFGFVT ST + A+E + ++DGR +TVN+A
Sbjct: 44 --------IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEA 89
>gi|434395383|ref|YP_007130330.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
gi|428267224|gb|AFZ33170.1| RNP-1 like RNA-binding protein [Gloeocapsa sp. PCC 7428]
Length = 101
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 56/84 (66%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVGNL +EV L VF+E+G V ++ DRETGR RGFGFV M +E E + AI AL
Sbjct: 3 VYVGNLSYEVTQEDLSAVFAEYGSVKRVQLPTDRETGRVRGFGFVEMDTEAEEDLAIDAL 62
Query: 342 DGQNLDGRAIRVNVAEDRQRRSSF 365
DG GR +RVN A+ R+ R+SF
Sbjct: 63 DGAEWMGRTLRVNKAKPRENRTSF 86
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNL Y+V E L+ +F + G+V+ +Q+ +R
Sbjct: 3 VYVGNLSYEVTQEDLSAVFAEYGSVK--------------------------RVQLPTDR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET R RGFGFV M T E + A++ + GR L VNKA PR
Sbjct: 37 ETGRVRGFGFVEMDTEAEEDLAIDALDGAEWMGRTLRVNKAKPR 80
>gi|281345572|gb|EFB21156.1| hypothetical protein PANDA_005635 [Ailuropoda melanoleuca]
Length = 605
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 39/214 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NL DVD + L LF + G ++ VK +
Sbjct: 193 IYVKNLHVDVDEQGLQDLFSQFG--KMLSVK-------------------------VMRD 225
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
+ SRGFGFV EEA+KAV + ++ GRLL V +A R + R FE
Sbjct: 226 DIGHSRGFGFVNFEKHEEAQKAVMDMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQ 285
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL +D+ +L + FS +G + +A+V+ E G S+GFGFV SS
Sbjct: 286 DRATRYQGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSSP 343
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 344 EEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML+EK F G + + +V
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEK--------------FSPAGPILSI---------RVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ ++ +AE+A++ + I G+ + + + +R P + + G
Sbjct: 45 DVATRRSLGYAYINFQQPADAERALDTMNFEVIKGQPVRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++ +VV D SRGFGFV + + AI
Sbjct: 98 VGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHG--SRGFGFVHFETHEAAHQAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
A ++G L+ R + V + R+ R
Sbjct: 156 ATMNGMLLNDRKVFVGHFKSRRER 179
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 278 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
PG+ +YVG+L +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 335 NDAIAALDGQNLDGRAIRV 353
A+ ++ + + G+ +R+
Sbjct: 66 ERALDTMNFEVIKGQPVRI 84
>gi|422304104|ref|ZP_16391453.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
gi|389790787|emb|CCI13324.1| putative RNA-binding protein rbpF [Microcystis aeruginosa PCC 9806]
Length = 97
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 55/84 (65%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNLP+EVD + +VF E+GK+ + DRETG+ RGF FV M + E AIAAL
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIKRVHLPMDRETGKKRGFAFVEMETPEEEAKAIAAL 62
Query: 342 DGQNLDGRAIRVNVAEDRQRRSSF 365
DG GR ++VN A +R+ + SF
Sbjct: 63 DGAQWMGRELKVNQAREREPKPSF 86
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 26/108 (24%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNLP++VD + + +F++ G ++ + + +R
Sbjct: 3 IYVGNLPFEVDQDDVVEVFKEYGKIK--------------------------RVHLPMDR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
ET + RGF FV M T EE KA+ GR L VN+A R +P
Sbjct: 37 ETGKKRGFAFVEMETPEEEAKAIAALDGAQWMGRELKVNQAREREPKP 84
>gi|384496545|gb|EIE87036.1| hypothetical protein RO3G_11747 [Rhizopus delemar RA 99-880]
Length = 616
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 86/158 (54%), Gaps = 11/158 (6%)
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
++ E +S+GFGF+ E+A KAV+ + + +G+ L V +A + + E + +
Sbjct: 250 LVQTDEEGKSKGFGFINFENYEDAHKAVDTLNETEHNGKTLYVARAQKKTEREEELRKQY 309
Query: 277 EP----------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
E G +Y+ NL ++D+ +L Q FS +G + +A+V+ D E G S+GFGFV
Sbjct: 310 EQAKLEKLAKYQGVNLYIKNLDDDIDDEKLRQEFSVYGVITSAKVMCD-EKGTSKGFGFV 368
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
SS E A+ ++G+ + + I V +A+ ++ R S
Sbjct: 369 CFSSPDEATKAVTEMNGRMIGSKPIYVALAQRKEVRRS 406
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 35/210 (16%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P A L+VG L V AMLFE F+M + V+ +
Sbjct: 35 PSPSASLYVGELDPSVTE---AMLFEM-------------------FNM----IGPVASI 68
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV 275
+V + T RS G+ +V + + E+A+E + I G+ + +R P +
Sbjct: 69 RVCRDAVTRRSLGYAYVNFHNIVDGERALESLNYTLIKGKPCRI-------MWSQRDPSL 121
Query: 276 FEPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
+ G +++ NL +DN L FS G +++ ++ D E+G S+G+GFV +E
Sbjct: 122 RKTGSGNVFIKNLDTSIDNKALHDTFSAFGNILSCKIALD-ESGNSKGYGFVHYETEEAA 180
Query: 335 NDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
++AI +DG L+ + + V R+ R +
Sbjct: 181 DNAIKHVDGMLLNDKKVYVGRHIPRKERQA 210
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
E+ S+G+GFV T E A+ A++ ++ + + V + PR + + ++
Sbjct: 162 ESGNSKGYGFVHYETEEAADNAIKHVDGMLLNDKKVYVGRHIPRKERQAKIEQIRAKFTN 221
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YV NL +++ + +++FS+ G + +A V D E G+S+GFGF+ + + + A+ L
Sbjct: 222 VYVKNLDESINDEQFKEMFSKFGPITSALVQTDEE-GKSKGFGFINFENYEDAHKAVDTL 280
Query: 342 DGQNLDGRAIRVNVAEDRQRR 362
+ +G+ + V A+ + R
Sbjct: 281 NETEHNGKTLYVARAQKKTER 301
>gi|242084350|ref|XP_002442600.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
gi|241943293|gb|EES16438.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
Length = 165
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + AI
Sbjct: 8 YRCFVGGLAWATDDNSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 GMNGKELDGRNITVNEAQ 85
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F G E+ E K +I +
Sbjct: 9 RCFVGGLAWATDDNSLHSAFSTYG--EVLESK------------------------IILD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT ST E A+E + ++DGR +TVN+A
Sbjct: 43 RETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEA 84
>gi|20257687|gb|AAM16009.1| glycine-rich RNA binding protein [Zea mays]
gi|20257713|gb|AAM16022.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + AI
Sbjct: 11 YRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIE 70
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 71 GMNGKELDGRNITVNEAQ 88
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 26/112 (23%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
EE + + FVG L + D L F G E+ E K
Sbjct: 2 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYG--EVLESK------------------ 41
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+I +RET RSRGFGFVT ST + A+E + ++DGR +TVN+A
Sbjct: 42 ------IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEA 87
>gi|20257715|gb|AAM16023.1| glycine-rich RNA binding protein [Zea mays]
gi|20257721|gb|AAM16026.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + AI
Sbjct: 11 YRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIE 70
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 71 GMNGKELDGRNITVNEAQ 88
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 50/112 (44%), Gaps = 26/112 (23%)
Query: 151 EEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF 210
EE + + FVG L + D L F G E+ E K
Sbjct: 2 EEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYG--EVLESK------------------ 41
Query: 211 YVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+I +RET RSRGFGFVT ST + A+E + ++DGR +TVN+A
Sbjct: 42 ------IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEA 87
>gi|443328827|ref|ZP_21057420.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
gi|442791563|gb|ELS01057.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
Length = 95
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 56/84 (66%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IY+GNL +EV+ L +VF+E+G V V DRETGR RGF FV M SE + + AIAAL
Sbjct: 3 IYIGNLSYEVNQEDLNEVFTEYGTVKRVHVPTDRETGRVRGFAFVEMESEADEDKAIAAL 62
Query: 342 DGQNLDGRAIRVNVAEDRQRRSSF 365
DG R ++VN A+ R+ RSSF
Sbjct: 63 DGAEWMDRELKVNKAKPREDRSSF 86
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+++GNL Y+V+ E L +F + GTV+ + V +R
Sbjct: 3 IYIGNLSYEVNQEDLNEVFTEYGTVK--------------------------RVHVPTDR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET R RGF FV M + + +KA+ + R L VNKA PR
Sbjct: 37 ETGRVRGFAFVEMESEADEDKAIAALDGAEWMDRELKVNKAKPR 80
>gi|168702594|ref|ZP_02734871.1| RNA-binding region RNP-1 [Gemmata obscuriglobus UQM 2246]
Length = 144
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVGNLP+ A LEQ+F +G V A+VV DRETGRSRGFGFV MSS + +AIAAL
Sbjct: 6 LYVGNLPFTTTQADLEQLFGNYGTVTKAQVVSDRETGRSRGFGFVEMSSGAD--EAIAAL 63
Query: 342 DGQNLDGRAIRVNVAEDRQRR 362
+ GR + VN A+ R+ R
Sbjct: 64 NNAEYQGRRLTVNEAKPREER 84
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 52/108 (48%), Gaps = 28/108 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
L+VGNLP+ L LF GTV A QV+ +R
Sbjct: 6 LYVGNLPFTTTQADLEQLFGNYGTVTKA--------------------------QVVSDR 39
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
ET RSRGFGFV MS+ A++A+ + + GR LTVN+A PR +P
Sbjct: 40 ETGRSRGFGFVEMSS--GADEAIAALNNAEYQGRRLTVNEAKPREERP 85
>gi|799015|emb|CAA89058.1| putative glycine rich RNA binding protein [Solanum tuberosum]
Length = 175
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 53/80 (66%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W + L FS++ +VV ++++ DRETGRSRGFGFVT E + DAI
Sbjct: 6 YRCFVGGLAWATTDQTLSDAFSQYAEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIE 65
Query: 340 ALDGQNLDGRAIRVNVAEDR 359
++ Q+LDGR I VN A+ R
Sbjct: 66 GMNRQDLDGRNITVNEAQSR 85
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRG 266
++I +RET RSRGFGFVT + A+E +R D+DGR +TVN+A RG
Sbjct: 36 KIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNRQDLDGRNITVNEAQSRG 86
>gi|125555768|gb|EAZ01374.1| hypothetical protein OsI_23407 [Oryza sativa Indica Group]
Length = 407
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 33/201 (16%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K+FVG + ++ E FEK G + S ++ +
Sbjct: 92 KIFVGGVAWETTEESFTKHFEKYGAI--------------------------SDSVIMKD 125
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEPG 279
+ T RGFGFVT S +K ++ H IDGR + V + PR + P+
Sbjct: 126 KHTKMPRGFGFVTFSDPSVIDKVLQDEH--TIDGRTVEVKRTVPREEMSSKDGPKTR--- 180
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+I+VG +P + +L++ FS +GKVV +++ D TGRSRGFGFVT +E + ++
Sbjct: 181 -KIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMS 239
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
+L G+ + + AE ++
Sbjct: 240 EGRMHDLAGKQVEIKKAEPKK 260
>gi|157118269|ref|XP_001653144.1| heterogeneous nuclear ribonucleoprotein 27c [Aedes aegypti]
gi|94468876|gb|ABF18287.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
factor I complex subunit HRP1 [Aedes aegypti]
gi|108875770|gb|EAT39995.1| AAEL008257-PA [Aedes aegypti]
Length = 398
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 95/206 (46%), Gaps = 39/206 (18%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E KLFVG L ++ E L F + G V + V V
Sbjct: 16 EKGKLFVGGLSWETTQENLQRYFGRYGEV-------------------IDCV-------V 49
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT-QPERA---P 273
+ N ET RSRGFGFVT + + ++A+E + +DGR + PR +P+R P
Sbjct: 50 MKNNETGRSRGFGFVTFADPDNVDRALEN-GPHTLDGRTIDPKPCNPRSLHKPKRTGGYP 108
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
+VF +G LP + L FS +G V+ ++YD+E +SRGFGF++ +E
Sbjct: 109 KVF-------LGGLPPNITETDLRSFFSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEPA 161
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDR 359
+ A A N+ G+ + + AE R
Sbjct: 162 VERATAEHF-VNISGKQVEIKKAEPR 186
>gi|399931791|gb|AFP57445.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 144
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 55/82 (67%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG L W D+ L F+ G VV+A V+ D ++GRSRGFGFV S + N+AI A
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDAGVIVDGDSGRSRGFGFVNFSDDECANEAIKA 98
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
+DGQ L GR IRV++A++R R
Sbjct: 99 MDGQELQGRNIRVSIAQERAPR 120
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 32/114 (28%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG L + D + L F G V A V I +
Sbjct: 39 KLFVGGLSWGTDDQSLRDAFATFGDVVDAGV--------------------------IVD 72
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
++ RSRGFGFV S E A +A++ ++ GR + V+ A ERAPR
Sbjct: 73 GDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIA------QERAPR 120
>gi|212704871|ref|ZP_03312999.1| hypothetical protein DESPIG_02938 [Desulfovibrio piger ATCC 29098]
gi|212671713|gb|EEB32196.1| hypothetical protein DESPIG_02938 [Desulfovibrio piger ATCC 29098]
Length = 88
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNLPW +++ +F+E+GKV++ ++V DRETGR+RGFGFV M + E AI AL
Sbjct: 5 IYVGNLPWAATEEQVQDLFAEYGKVLSVKLVSDRETGRARGFGFVEM-EDGEAQAAIEAL 63
Query: 342 DGQNLDGRAIRVNVAEDRQRR 362
D + GR +RVN A+ R R
Sbjct: 64 DNYSFGGRTLRVNEAKPRAPR 84
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 27/110 (24%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNLP+ E++ LF + G V ++++ +R
Sbjct: 5 IYVGNLPWAATEEQVQDLFAEYGKV--------------------------LSVKLVSDR 38
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
ET R+RGFGFV M EA+ A+E Y GR L VN+A PR +P R
Sbjct: 39 ETGRARGFGFVEMED-GEAQAAIEALDNYSFGGRTLRVNEAKPRAPRPPR 87
>gi|156388911|ref|XP_001634736.1| predicted protein [Nematostella vectensis]
gi|156221822|gb|EDO42673.1| predicted protein [Nematostella vectensis]
Length = 313
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 85/162 (52%), Gaps = 10/162 (6%)
Query: 199 NQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 258
+Q F M AV ++ +++ ++ + S GFGFV +T E+A+KA++ + + I ++L
Sbjct: 18 DQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTTEDAQKAIDKLNGFTIGNKVLK 77
Query: 259 VNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 318
V + P G + G +YV N+P ++ A + F +G +VN R++ D+ TG
Sbjct: 78 VAFSRPGGDNTK--------GANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTG 129
Query: 319 RSRGFGFVTMSSETELNDAIAALDGQNLDG--RAIRVNVAED 358
+G GFV + E AI++L G G +++ A+D
Sbjct: 130 LPKGCGFVLYDKKAEAQAAISSLSGTFFPGSTMGLQIRYADD 171
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 47/82 (57%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
PG +YV N+ ++ + + +F++ G V +++D + + +GF FVTM+++ E +A
Sbjct: 231 PGCTLYVYNIGYDANQEGITALFAQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNA 290
Query: 338 IAALDGQNLDGRAIRVNVAEDR 359
I L+G + ++V++ R
Sbjct: 291 IQTLNGFMYTNKPLQVSLYSKR 312
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 26/111 (23%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
+ P L+V N+ YD + E + LF + G V ++ MW
Sbjct: 228 QAPPGCTLYVYNIGYDANQEGITALFAQCGIVNKVDI------------MW--------- 266
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+ + + +GF FVTM+T EEA+ A++ + + + L V+ + R
Sbjct: 267 -----DWQRQQCKGFCFVTMATQEEAQNAIQTLNGFMYTNKPLQVSLYSKR 312
>gi|119596295|gb|EAW75889.1| hCG2019100, isoform CRA_c [Homo sapiens]
Length = 433
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 41/215 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NLP DVD + L LF + G +L V R
Sbjct: 193 IYVKNLPVDVDEQGLQDLFSQFG----------------------------KMLSVKVMR 224
Query: 222 E-TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE--- 277
+ + SR FGFV EEA+KAV + ++ GRLL +A R + R FE
Sbjct: 225 DNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMK 284
Query: 278 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +YV NL +D+ +L + FS +G + +A+V+ E G S+GFGFV SS
Sbjct: 285 QDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVM--TEGGHSKGFGFVCFSS 342
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 343 PEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 42/209 (20%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
A L+VG+L DV AML+EK AG + + VC
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPI---------------LSIRVCR-------- 44
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
+ T RS G+ ++ +AE+A++ + + G+ + + +R P +
Sbjct: 45 ---DVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRI-------MWSQRDPGLR 94
Query: 277 EPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
+ G I++ NL +DN L FS G +++ +V D E G SRGFGFV +
Sbjct: 95 KSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACD-EHG-SRGFGFVHFETHEAAQ 152
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
AI ++G L+ R + V + R+ R +
Sbjct: 153 QAINTMNGMLLNDRKVFVGHFKSRREREA 181
>gi|374584597|ref|ZP_09657689.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
gi|373873458|gb|EHQ05452.1| RNP-1 like RNA-binding protein [Leptonema illini DSM 21528]
Length = 109
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 53/81 (65%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVG L W+ + L F HG V A VV DR TG+SRGFGFVT + E AI+A
Sbjct: 4 KLYVGGLSWDTTDTTLRHSFEAHGSVHEAIVVMDRYTGKSRGFGFVTFADENSARTAISA 63
Query: 341 LDGQNLDGRAIRVNVAEDRQR 361
++G +LDGR+I V+ A++R R
Sbjct: 64 MNGTDLDGRSITVSEAQERSR 84
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VG L +D L FE G+V A V+ +
Sbjct: 4 KLYVGGLSWDTTDTTLRHSFEAHGSVHEA--------------------------IVVMD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
R T +SRGFGFVT + A A+ + D+DGR +TV++A R
Sbjct: 38 RYTGKSRGFGFVTFADENSARTAISAMNGTDLDGRSITVSEAQER 82
>gi|224082053|ref|XP_002306558.1| predicted protein [Populus trichocarpa]
gi|222856007|gb|EEE93554.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 42/234 (17%)
Query: 129 EDTVVEAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEI 188
+D V E + EE +EEEF + +LF N+P++ +E + LF+K GTV
Sbjct: 84 DDVVTEYQSKAEE-------KEEEFSK----TRLFASNVPWNCTAEDIRALFQKFGTVVD 132
Query: 189 AEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFH 248
E+ +Y++ R+RG FVTM + EEA A+
Sbjct: 133 VELS-------------------------MYSK--IRNRGLAFVTMGSPEEAVAALNNLE 165
Query: 249 RYDIDGRLLTVNKA-APRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVF-SEHGKV 306
Y+ +GR L +N A A + P P F ++V NLP+E + L++ F +E V
Sbjct: 166 SYEFEGRTLKMNYAKAKKKKPSPPPPPKPGPTFNLFVANLPFEAKSKDLKEFFIAEGANV 225
Query: 307 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
V+A +++ R G+GFV ++ E + AI+ + GR +R VA RQ
Sbjct: 226 VSAEIIFHDNPRRPSGYGFVAFKTKKEADYAISTFSDKEFMGRQLR--VARSRQ 277
>gi|198282085|ref|NP_001105572.1| glycine-rich RNA binding protein [Zea mays]
gi|2668742|gb|AAB88616.1| glycine-rich RNA binding protein [Zea mays]
gi|194692162|gb|ACF80165.1| unknown [Zea mays]
gi|195623052|gb|ACG33356.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 145
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + AI
Sbjct: 8 YRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 GMNGKELDGRNITVNEAQ 85
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F G E+ E K +I +
Sbjct: 9 RCFVGGLAWATDDHSLNNAFSTYG--EVLESK------------------------IILD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT ST + A+E + ++DGR +TVN+A
Sbjct: 43 RETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEA 84
>gi|195618802|gb|ACG31231.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195625478|gb|ACG34569.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + AI
Sbjct: 8 YRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 GMNGKELDGRNITVNEAQ 85
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F G E+ E K +I +
Sbjct: 9 RCFVGGLAWATDDHSLNNAFSTYG--EVLESK------------------------IILD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT ST + A+E + ++DGR +TVN+A
Sbjct: 43 RETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEA 84
>gi|427740185|ref|YP_007059729.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
gi|427375226|gb|AFY59182.1| RRM domain-containing RNA-binding protein [Rivularia sp. PCC 7116]
Length = 95
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 54/79 (68%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNL ++V L +VF+E+G V ++ DRETGRSRGFGFV M SE E + AI AL
Sbjct: 3 IYVGNLSYDVTQEDLSKVFAEYGSVKRVQLPTDRETGRSRGFGFVEMQSEDEESSAIQAL 62
Query: 342 DGQNLDGRAIRVNVAEDRQ 360
DG GRA++VN A R+
Sbjct: 63 DGAEWMGRAMKVNKARPRE 81
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNL YDV E L+ +F + G+V+ +Q+ +R
Sbjct: 3 IYVGNLSYDVTQEDLSKVFAEYGSVK--------------------------RVQLPTDR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET RSRGFGFV M + +E A++ + GR + VNKA PR
Sbjct: 37 ETGRSRGFGFVEMQSEDEESSAIQALDGAEWMGRAMKVNKARPR 80
>gi|410899897|ref|XP_003963433.1| PREDICTED: embryonic polyadenylate-binding protein-like [Takifugu
rubripes]
Length = 606
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 91/170 (53%), Gaps = 12/170 (7%)
Query: 206 VCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
V A F +L + E RSRGFGFV + E+A+KAV+ + +++G+++ V +A R
Sbjct: 210 VFAAFGRTLSVRVMKDERGRSRGFGFVNFAHHEDAQKAVDEMNGKELNGKVIYVGRAQKR 269
Query: 266 GTQPERAPRVFE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDR 315
+ R FE G +YV NL +D+ RL + F+ +G + +A+V+ D
Sbjct: 270 LERQGELKRKFELIKQDRIQRYQGVNLYVKNLDDSIDDERLRKEFAPYGTITSAKVMTDG 329
Query: 316 ETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
+SRGFGFV SS E A+ ++G+ + + + V +A+ R+ R +
Sbjct: 330 P--QSRGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRREERKAI 377
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 73/137 (53%), Gaps = 1/137 (0%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVG 285
S+G+GFV T E A +A+E + ++ R + V R + E IY+
Sbjct: 137 SKGYGFVHFETEEAANRAIETMNGMLLNDRKVFVGHFKSRKEREEELGSKALKFTNIYIK 196
Query: 286 NLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN 345
N + ++ +L++VF+ G+ ++ RV+ D E GRSRGFGFV + + A+ ++G+
Sbjct: 197 NFGEDYNDEKLKEVFAAFGRTLSVRVMKD-ERGRSRGFGFVNFAHHEDAQKAVDEMNGKE 255
Query: 346 LDGRAIRVNVAEDRQRR 362
L+G+ I V A+ R R
Sbjct: 256 LNGKVIYVGRAQKRLER 272
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV L F AG + + VC +I
Sbjct: 11 ASLYVGDLHPDVTEAMLYQKFSPAGPI---------------MSIRVCR-------DII- 47
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
T RS G+ ++ +AE A++ + I GR + + +R P + + G
Sbjct: 48 ---TRRSLGYAYINFQQPADAECALDTMNYDVIKGRPIRI-------MWSQRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ N+ +DN L FS G +++ +VV D E G S+G+GFV +E N AI
Sbjct: 98 VGNIFIKNMDESIDNKALYDTFSAFGNILSCKVVCD-ERG-SKGYGFVHFETEEAANRAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + R+ R
Sbjct: 156 ETMNGMLLNDRKVFVGHFKSRKER 179
>gi|317484641|ref|ZP_07943544.1| RNA recognition domain-containing protein [Bilophila wadsworthia
3_1_6]
gi|345888525|ref|ZP_08839605.1| hypothetical protein HMPREF0178_02379 [Bilophila sp. 4_1_30]
gi|316924115|gb|EFV45298.1| RNA recognition domain-containing protein [Bilophila wadsworthia
3_1_6]
gi|345040599|gb|EGW44839.1| hypothetical protein HMPREF0178_02379 [Bilophila sp. 4_1_30]
Length = 88
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNLPW +++ +F+++G VV+ ++V DRETGR+RGFGFV M E + AI AL
Sbjct: 5 IYVGNLPWSATEEQVQSLFADYGPVVSVKLVSDRETGRARGFGFVEM-EEPGASAAIEAL 63
Query: 342 DGQNLDGRAIRVNVAEDRQRR 362
D N GR +RVN A+ R R
Sbjct: 64 DNANFGGRTLRVNEAKPRAPR 84
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 27/110 (24%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNLP+ E++ LF G V VS+ +++ +R
Sbjct: 5 IYVGNLPWSATEEQVQSLFADYGPV-------------------------VSV-KLVSDR 38
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
ET R+RGFGFV M A A+E + GR L VN+A PR +P R
Sbjct: 39 ETGRARGFGFVEMEE-PGASAAIEALDNANFGGRTLRVNEAKPRAPRPPR 87
>gi|448112633|ref|XP_004202146.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
gi|359465135|emb|CCE88840.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
Length = 625
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 81/150 (54%), Gaps = 11/150 (7%)
Query: 225 RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP------ 278
+S+GFGFV + E A KAVE + DI+G+ L V +A + + E R +E
Sbjct: 269 KSKGFGFVNFESHEAAVKAVEELNDKDINGQKLYVGRAQKKRERIEELKRQYEAARLEKL 328
Query: 279 ----GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
G ++V NL +D+ +LE+ F G + +ARV+ D E G+S+GFGFV SS E
Sbjct: 329 SKYQGVNLFVKNLDDSIDSVKLEEEFKPFGTITSARVMVD-EHGKSKGFGFVCFSSPEEA 387
Query: 335 NDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
AI ++ + G+ + V +A+ + R S
Sbjct: 388 TKAITEMNQRMFHGKPLYVALAQRKDVRRS 417
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 94/224 (41%), Gaps = 35/224 (15%)
Query: 142 SGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQG 201
SG EG + P A L+VG L V+ A+LFE
Sbjct: 32 SGNEGEDAADSSQLPDTSASLYVGELNPSVNE---ALLFE-------------------- 68
Query: 202 FHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNK 261
V VS ++V + T +S G+ +V +E+ EKA+E + IDGR +
Sbjct: 69 ---IFSPVGQVSSIRVCRDAVTKKSLGYAYVNFHKLEDGEKAIEELNYSLIDGRPCRI-- 123
Query: 262 AAPRGTQPERAPRVFEPG-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRS 320
+R P + G I++ NL +DN L FS GK+++ +V D E G S
Sbjct: 124 -----MWSQRDPSLRRNGEGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATD-EQGNS 177
Query: 321 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
+ FGFV + AI ++G L+ R + V ++ R S
Sbjct: 178 KCFGFVHYETAEAAKAAIENVNGMLLNDREVYVGKHVSKKDRES 221
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 2/170 (1%)
Query: 193 FHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI 252
H N+ H A + +V + E S+ FGFV T E A+ A+E + +
Sbjct: 145 LHPAIDNKALHDTFSAFGKILSCKVATD-EQGNSKCFGFVHYETAEAAKAAIENVNGMLL 203
Query: 253 DGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVV 312
+ R + V K + + + + +YV N+ + ++F +GK+ + +
Sbjct: 204 NDREVYVGKHVSKKDRESKFEEMKANFTNVYVKNIDLGFSEEEMRKLFEPYGKITSLHLE 263
Query: 313 YDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
D E G+S+GFGFV S A+ L+ ++++G+ + V A+ ++ R
Sbjct: 264 KDAE-GKSKGFGFVNFESHEAAVKAVEELNDKDINGQKLYVGRAQKKRER 312
>gi|324509105|gb|ADY43836.1| Polyadenylate-binding protein 1, partial [Ascaris suum]
Length = 661
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 40/215 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+F+ N ++D EKL LF K G + CAV +
Sbjct: 202 VFIKNFADELDKEKLEKLFAKFGKIT------------------SCAVM---------SD 234
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI--DGRLLTVNKAAPRGTQPERAPRVFEP- 278
+S+GFGFV E+AEKAV H Y + R L V +A + + R +E
Sbjct: 235 ADGKSKGFGFVAFENPEDAEKAVNEMHEYQLPDSERKLYVCRAQKKNERSAELKRRYEQQ 294
Query: 279 ---------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMS 329
G +YV NL VD+ L Q F +GK+ +A+V+ D + GRS+GFGFV
Sbjct: 295 KVERMQRYQGVNLYVKNLDDTVDDEVLRQNFESYGKITSAKVMCD-DNGRSKGFGFVCFE 353
Query: 330 SETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 354 KPDEATKAVTEMNGKMMCTKPLYVALAQRKEDRKA 388
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 30/205 (14%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+F+ NL +D++ + F +FGN + C V N
Sbjct: 109 IFIKNLDKSIDNKAIYDTFS--------------MFGN----ILSCKV---------AND 141
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
E S+G+GFV T E A+KA+E + ++G+ + V K PR +
Sbjct: 142 EESNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPRAARMREMGETARRFTN 201
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+++ N E+D +LE++F++ GK+ + V+ D + G+S+GFGFV + + A+ +
Sbjct: 202 VFIKNFADELDKEKLEKLFAKFGKITSCAVMSDAD-GKSKGFGFVAFENPEDAEKAVNEM 260
Query: 342 DGQNL--DGRAIRVNVAEDRQRRSS 364
L R + V A+ + RS+
Sbjct: 261 HEYQLPDSERKLYVCRAQKKNERSA 285
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 35/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AMLFEK F + G V ++V
Sbjct: 19 ASLYVGDLHPDVTE---AMLFEK--------------FSSAG---------PVLSIRVCR 52
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ +V +AE+A++ + + G+ + + +R P + G
Sbjct: 53 DAITRRSLGYAYVNFQQPADAERALDTMNFDVMYGKPIRI-------MWSQRDPSMRRSG 105
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN + FS G +++ +V D E+ S+G+GFV +E AI
Sbjct: 106 AGNIFIKNLDKSIDNKAIYDTFSMFGNILSCKVANDEESN-SKGYGFVHFETEESAQKAI 164
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+G+ + V + R R
Sbjct: 165 EKVNGMLLEGKKVYVGKFQPRAAR 188
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P +YVG+L +V A L + FS G V++ RV D T RS G+ +V DA
Sbjct: 17 PMASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPA---DA 73
Query: 338 IAALDGQNLD---GRAIRV 353
ALD N D G+ IR+
Sbjct: 74 ERALDTMNFDVMYGKPIRI 92
>gi|113478077|ref|YP_724138.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
gi|110169125|gb|ABG53665.1| RNA-binding region RNP-1 [Trichodesmium erythraeum IMS101]
Length = 102
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 55/83 (66%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNL ++V L +VF+E+G V ++ DRETGR RGFGFV MSSE E AI AL
Sbjct: 3 IYVGNLSYDVTQDDLSEVFAEYGTVKRVQLPTDRETGRPRGFGFVEMSSENEEQKAIEAL 62
Query: 342 DGQNLDGRAIRVNVAEDRQRRSS 364
DG GR I+VN A+ R+ R S
Sbjct: 63 DGAEWMGRDIKVNKAKPREDRGS 85
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNL YDV + L+ +F + GTV+ +Q+ +R
Sbjct: 3 IYVGNLSYDVTQDDLSEVFAEYGTVK--------------------------RVQLPTDR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET R RGFGFV MS+ E +KA+E + GR + VNKA PR
Sbjct: 37 ETGRPRGFGFVEMSSENEEQKAIEALDGAEWMGRDIKVNKAKPR 80
>gi|20257691|gb|AAM16011.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + AI
Sbjct: 17 YRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIE 76
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 77 GMNGKELDGRNITVNEAQ 94
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 52/116 (44%), Gaps = 26/116 (22%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
V E EE + + FVG L + D L F G E+ E K
Sbjct: 4 VGEREEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYG--EVLESK-------------- 47
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+I +RET RSRGFGFVT ST + A+E + ++DGR +TVN+A
Sbjct: 48 ----------IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEA 93
>gi|20257667|gb|AAM15999.1| glycine-rich RNA binding protein [Zea mays]
gi|20257671|gb|AAM16001.1| glycine-rich RNA binding protein [Zea mays]
gi|20257677|gb|AAM16004.1| glycine-rich RNA binding protein [Zea mays]
gi|20257685|gb|AAM16008.1| glycine-rich RNA binding protein [Zea mays]
gi|20257703|gb|AAM16017.1| glycine-rich RNA binding protein [Zea mays]
gi|20257717|gb|AAM16024.1| glycine-rich RNA binding protein [Zea mays]
gi|20257719|gb|AAM16025.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + AI
Sbjct: 17 YRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIE 76
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 77 GMNGKELDGRNITVNEAQ 94
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 52/116 (44%), Gaps = 26/116 (22%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
V E EE + + FVG L + D L F G E+ E K
Sbjct: 4 VGEREEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYG--EVLESK-------------- 47
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+I +RET RSRGFGFVT ST + A+E + ++DGR +TVN+A
Sbjct: 48 ----------IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEA 93
>gi|297735183|emb|CBI17545.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 34/206 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DA +VGNL V E L LF +AG V +++V
Sbjct: 23 QDATAYVGNLDPQVTEELLWELFVQAGPV---------------VNVYVPK--------- 58
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+R T+ +G+GFV + E+A+ A+++ + + G+ + VNKA+ + + +
Sbjct: 59 --DRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-------QDKKSLD 109
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVV-NARVVYDRETGRSRGFGFVTMSSETELND 336
G ++VGNL +VD L FS G +V N +++ D +TG SRGFGFV+ S +
Sbjct: 110 VGANLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDA 169
Query: 337 AIAALDGQNLDGRAIRVNVAEDRQRR 362
AI A++GQ L R I V+ A + +
Sbjct: 170 AIEAMNGQYLCNRQITVSYAYKKDTK 195
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LFVGNL DVD + L F G + V+ +++
Sbjct: 112 ANLFVGNLDPDVDEKLLYDTFSAFGVI-------------------------VTNPKIMR 146
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+ +T SRGFGFV+ + E ++ A+E + + R +TV+ A + T+ ER
Sbjct: 147 DPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
>gi|156367085|ref|XP_001627250.1| predicted protein [Nematostella vectensis]
gi|156214154|gb|EDO35150.1| predicted protein [Nematostella vectensis]
Length = 259
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%), Gaps = 3/79 (3%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHG-KVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
++ Y+GNL + VD LE+ F HG VV+ +V+ DRETGR RGFGFVT SE E++ AI
Sbjct: 112 YKCYIGNLSYSVDEQALEEKF--HGYNVVDVKVITDRETGRPRGFGFVTFGSEDEMDKAI 169
Query: 339 AALDGQNLDGRAIRVNVAE 357
DG++LDGR ++VN A+
Sbjct: 170 DKFDGEDLDGRPMKVNKAQ 188
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 27/104 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K ++GNL Y VD + L E KFH G++ V ++VI +
Sbjct: 113 KCYIGNLSYSVDEQAL-------------EEKFH------GYN--------VVDVKVITD 145
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP 264
RET R RGFGFVT + +E +KA++ F D+DGR + VNKA P
Sbjct: 146 RETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQP 189
>gi|20257673|gb|AAM16002.1| glycine-rich RNA binding protein [Zea mays]
Length = 139
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + AI
Sbjct: 2 YRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIE 61
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 62 GMNGKELDGRNITVNEAQ 79
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F G E+ E K +I +
Sbjct: 3 RCFVGGLAWATDDHSLNNAFSTYG--EVLESK------------------------IILD 36
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT ST + A+E + ++DGR +TVN+A
Sbjct: 37 RETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEA 78
>gi|20257683|gb|AAM16007.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + AI
Sbjct: 17 YRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIE 76
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 77 GMNGKELDGRNITVNEAQ 94
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 26/116 (22%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
V E E+ + + FVG L + D L F G E+ E K
Sbjct: 4 VGEREKMAASDVEYRCFVGGLAWATDDHSLNNAFSTYG--EVLESK-------------- 47
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+I +RET RSRGFGFVT ST + A+E + ++DGR +TVN+A
Sbjct: 48 ----------IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEA 93
>gi|121606987|ref|YP_984316.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
gi|120595956|gb|ABM39395.1| RNP-1 like RNA-binding protein [Polaromonas naphthalenivorans CJ2]
Length = 152
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 58/84 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + L+Q F + G V +A+V+ +R+TGRS+GFGFV M+S+ E AI
Sbjct: 2 GNKLYVGNLPYSVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMASDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR++ VN A + R
Sbjct: 62 NGMNGQPLGGRSVVVNEARPMEAR 85
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 26/111 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V E L F + G V A +V+
Sbjct: 4 KLYVGNLPYSVRDEDLQQSFGQFGAVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
R+T RS+GFGFV M++ EA+ A+ + + GR + VN+A P +P R
Sbjct: 38 RDTGRSKGFGFVEMASDAEAQAAINGMNGQPLGGRSVVVNEARPMEARPPR 88
>gi|410953832|ref|XP_003983574.1| PREDICTED: polyadenylate-binding protein 1-like [Felis catus]
Length = 616
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 39/214 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NL DVD + L LF + G ++ VK +
Sbjct: 193 IYVKNLHVDVDEQGLQDLFSQFG--KMLSVK-------------------------VMRD 225
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
++ SRGFGFV EEA+KAV + ++ GRLL V +A R + R FE
Sbjct: 226 DSGHSRGFGFVNFEKHEEAQKAVTDMNGKEVRGRLLYVGRAQKRVERQNELKRRFEQMKQ 285
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL +D+ +L + FS +G + +A+V+ E G S+GFGFV SS
Sbjct: 286 DRLTRYQGVNLYVKNLDDSIDDEKLRREFSPYGVITSAKVM--TEGGHSKGFGFVCFSSP 343
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 344 EEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 42/207 (20%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
A L+VG+L DV AML+EK AG + + VC
Sbjct: 11 ASLYVGDLHPDVTE---AMLYEKFSPAGPI---------------LSIRVCR-------- 44
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
+ T RS G+ ++ +AE+A++ + I G+ + + + +R P +
Sbjct: 45 ---DVATRRSLGYAYINFQQPADAERALDTMNFEVIRGQPIRIMWS-------QRDPGLR 94
Query: 277 EPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
+ G I++ NL +DN L FS G +++ +VV D SRGFGFV +
Sbjct: 95 KSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDNHG--SRGFGFVHFETHEAAQ 152
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRR 362
AI ++G L+ R + V + R+ R
Sbjct: 153 QAIVTMNGMLLNDRKVFVGHFKSRRER 179
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 278 PGF---RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
PG+ +YVG+L +V A L + FS G +++ RV D T RS G+ ++ +
Sbjct: 6 PGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADA 65
Query: 335 NDAIAALDGQNLDGRAIRV 353
A+ ++ + + G+ IR+
Sbjct: 66 ERALDTMNFEVIRGQPIRI 84
>gi|213406493|ref|XP_002174018.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
gi|212002065|gb|EEB07725.1| nucleolar protein [Schizosaccharomyces japonicus yFS275]
Length = 690
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 92/205 (44%), Gaps = 39/205 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFV NL + S L F A V+ A V+ ++
Sbjct: 9 LFVRNLTFSTTSNDLTDFFSNAAPVKHA--------------------------VVVTDK 42
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRG---------TQPERA 272
ET +S+GFGFVT S E+A +A+E +DGR+L + AAPR +PE+
Sbjct: 43 ETGQSKGFGFVTFSLHEDAVRALEELKNKKLDGRILRMEFAAPRKRNGETSDKPKKPEQV 102
Query: 273 PRVFEPGFRIYVGNLPWEVDNAR-LEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
+ P R+ V NLPW V + LE F++ GKV +V + GR GF FV M
Sbjct: 103 RKDTRP--RLIVRNLPWSVKKPKHLEPYFAKFGKVREIKVPT-KGGGRMCGFAFVWMKDR 159
Query: 332 TELNDAIAALDGQNLDGRAIRVNVA 356
A+ L+ +DGR + V+ A
Sbjct: 160 ASAQKAMDTLNATEIDGRVVAVDWA 184
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++V NL + + L FS V +A VV D+ETG+S+GFGFVT S + A+ L
Sbjct: 9 LFVRNLTFSTTSNDLTDFFSNAAPVKHAVVVTDKETGQSKGFGFVTFSLHEDAVRALEEL 68
Query: 342 DGQNLDGRAIRVNVAEDRQR 361
+ LDGR +R+ A R+R
Sbjct: 69 KNKKLDGRILRMEFAAPRKR 88
>gi|195621182|gb|ACG32421.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + AI
Sbjct: 8 YRCFVGXLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 GMNGKELDGRNITVNEAQ 85
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F G E+ E K +I +
Sbjct: 9 RCFVGXLAWATDDHSLNNAFSTYG--EVLESK------------------------IILD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT ST + A+E + ++DGR +TVN+A
Sbjct: 43 RETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEA 84
>gi|151945512|gb|EDN63753.1| cleavage and polyadenylation factor CF I component involved in
pre-mRNA 3'-end processing [Saccharomyces cerevisiae
YJM789]
gi|190407229|gb|EDV10496.1| nuclear polyadenylated RNA-binding protein 4 [Saccharomyces
cerevisiae RM11-1a]
gi|207341455|gb|EDZ69508.1| YOL123Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270127|gb|EEU05357.1| Hrp1p [Saccharomyces cerevisiae JAY291]
Length = 534
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 39/209 (18%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E K+F+G L +D + L F K GTV + L++
Sbjct: 157 ESCKMFIGGLNWDTTEDNLREYFGKYGTV--------------------------TDLKI 190
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+ + T RSRGFGF++ ++ V+ H +DG+++ +A PR Q +
Sbjct: 191 MKDPATGRSRGFGFLSFEKPSSVDEVVKTQHI--LDGKVIDPKRAIPRDEQDKTG----- 243
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
+I+VG + +V E+ FS+ G +++A+++ D++TG+SRGFGFVT S + D
Sbjct: 244 ---KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DR 299
Query: 338 IAALDGQNLDGRAIRVNVAEDR--QRRSS 364
+ + R I + AE R Q++SS
Sbjct: 300 VCQNKFIDFKDRKIEIKRAEPRHMQQKSS 328
>gi|334350324|ref|XP_001371926.2| PREDICTED: ELAV-like protein 2-like [Monodelphis domestica]
Length = 522
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 10/164 (6%)
Query: 202 FHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNK 261
F+ V + +++ +R T +S G+GFV +AE+AV + +R + + V+
Sbjct: 201 FYNLFATVGKIQSCKLVRDRSTGQSLGYGFVNYVDPRDAEQAVCLLNRLQCPPKTIKVSF 260
Query: 262 AAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSR 321
A P + A +YV LP + LEQ+FS G+++ +R++ DR +G SR
Sbjct: 261 ARPSSSSIRDA--------NLYVSGLPRNMMQKDLEQLFSPFGRIITSRILIDRVSGASR 312
Query: 322 GFGFVTMSSETELNDAIAALDGQNLDGRAIR--VNVAEDRQRRS 363
G GF+ ++E +AI AL+GQ G + V A+ + +R+
Sbjct: 313 GVGFILFDKKSEAEEAIKALNGQKPCGNRVPLIVKFAQHQTQRT 356
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 49/85 (57%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G+ I+V NL + D L Q+F G V +++ D T + + FGFVTM+S E A+
Sbjct: 438 GWCIFVYNLSPDSDENVLWQLFGPFGAVSKVKIIRDFNTNKCKRFGFVTMTSYNEAALAV 497
Query: 339 AALDGQNLDGRAIRVNVAEDRQRRS 363
A+L+G L GR ++V+ ++ ++
Sbjct: 498 ASLNGYCLGGRVLQVSFKTNKIHKA 522
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 277 EPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELND 336
+P + V LP + +F+ GK+ + ++V DR TG+S G+GFV +
Sbjct: 182 DPKTNLIVNYLPQSMTQEEFYNLFATVGKIQSCKLVRDRSTGQSLGYGFVNYVDPRDAEQ 241
Query: 337 AIAALDGQNLDGRAIRVNVA 356
A+ L+ + I+V+ A
Sbjct: 242 AVCLLNRLQCPPKTIKVSFA 261
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVN 260
VS +++I + T++ + FGFVTM++ EA AV + Y + GR+L V+
Sbjct: 465 VSKVKIIRDFNTNKCKRFGFVTMTSYNEAALAVASLNGYCLGGRVLQVS 513
>gi|386346963|ref|YP_006045212.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
gi|339411930|gb|AEJ61495.1| RNP-1 like RNA-binding protein [Spirochaeta thermophila DSM 6578]
Length = 100
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
F+IYVGNL ++ L Q+F ++G+V + +++ DR++G S+GFGFV M+SE AI+
Sbjct: 3 FKIYVGNLNYQTTEDTLRQLFEQYGEVESVKIITDRDSGFSKGFGFVEMASEEAGEAAIS 62
Query: 340 ALDGQNLDGRAIRVNVAEDRQRRSSF 365
AL+ L+GR +RVN A +R RRSSF
Sbjct: 63 ALNQHELEGRQLRVNKAHER-RRSSF 87
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K++VGNL Y + L LFE+ G VE +++I +
Sbjct: 4 KIYVGNLNYQTTEDTLRQLFEQYGEVES--------------------------VKIITD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
R++ S+GFGFV M++ E E A+ ++++++GR L VNKA R
Sbjct: 38 RDSGFSKGFGFVEMASEEAGEAAISALNQHELEGRQLRVNKAHER 82
>gi|339246497|ref|XP_003374882.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316971853|gb|EFV55580.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 758
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 87/159 (54%), Gaps = 12/159 (7%)
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERAPRV 275
+ +E D+S+GFGFV+ E+AE AV+ + Y + G+ L V +A + + R
Sbjct: 195 CVVMKEDDKSKGFGFVSFENPEDAEAAVKEMNEYQLPSGKKLYVGRAQKKAERQAELKRR 254
Query: 276 FE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 325
+E G +Y+ NL VD+A+L + F + G + +A+V+ D E G+S+GFGF
Sbjct: 255 YEMLKLERIQQYEGVNLYLKNLDDSVDDAQLRKAFEKFGVITSAKVMTD-EKGQSKGFGF 313
Query: 326 VTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
V SS E A++ ++ Q L + + V +A+ ++ R +
Sbjct: 314 VCFSSPDEATRAVSEMNNQKLGNKPLYVALAQRKEDRKA 352
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 35/168 (20%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AMLFEK F + G V ++V
Sbjct: 12 ASLYVGDLHPDVTE---AMLFEK--------------FSHAG---------PVLSIRVCR 45
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ +V +AE+A++ + + GR + + + +R P + G
Sbjct: 46 DAVTRRSLGYAYVNYQQTPDAERALDTMNFDPVFGRPIRIMWS-------QRDPSLRRSG 98
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
+++ NL ++D+ + FS G +++ +V D E G S+G+G+V
Sbjct: 99 VGNVFIKNLDKDIDHKAIYDTFSNFGNILSCKVATD-ENGVSKGYGYV 145
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVG+L +V A L + FS G V++ RV D T RS G+ +V + DA AL
Sbjct: 14 LYVGDLHPDVTEAMLFEKFSHAGPVLSIRVCRDAVTRRSLGYAYVNYQ---QTPDAERAL 70
Query: 342 DGQNLD---GRAIRV 353
D N D GR IR+
Sbjct: 71 DTMNFDPVFGRPIRI 85
>gi|374812290|ref|ZP_09716027.1| RNP-1 like RNA-binding protein [Treponema primitia ZAS-1]
Length = 99
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 56/82 (68%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
++YVGNL + L +FSE G V ++++++DRETG S+GFGF+ M ++ E + AIA
Sbjct: 4 KLYVGNLSYNTTEDGLRNLFSEFGSVASSKIIFDRETGNSKGFGFIEMGTDEEASAAIAG 63
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
+G+ DGR +RVN A D+ RR
Sbjct: 64 TNGREFDGRQLRVNEAMDKPRR 85
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL Y+ + L LF + G+V + ++I++
Sbjct: 4 KLYVGNLSYNTTEDGLRNLFSEFGSVASS--------------------------KIIFD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
RET S+GFGF+ M T EEA A+ + + DGR L VN+A +
Sbjct: 38 RETGNSKGFGFIEMGTDEEASAAIAGTNGREFDGRQLRVNEAMDK 82
>gi|338722679|ref|XP_001915947.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) binding protein,
cytoplasmic 4-like [Equus caballus]
Length = 397
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 12/149 (8%)
Query: 223 TDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE----- 277
T +S+GFGFV+ + E A+KAVE + DI+G+LL V +A + + ++FE
Sbjct: 226 TGKSKGFGFVSFYSHEAAQKAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQQKQE 285
Query: 278 -----PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
G ++Y+ NL +D+ +L + FS G + +V+ +E GRS+GFG + SS
Sbjct: 286 RFRRCQGVKLYIKNLDDTIDDEKLRREFSSFGSISRVKVM--KEEGRSKGFGLICFSSPE 343
Query: 333 ELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
E A+ ++G+ L + + + +A+ Q+
Sbjct: 344 EATRAMTEMNGRILGSKPLNIALAQSLQQ 372
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVG 285
SRG+ FV A++A+E + + L V + R + IY+
Sbjct: 136 SRGYAFVHFQNQMAADRAIEEMNGALLKDCRLFVGRFKNRQDREAELQNKANEFTNIYIK 195
Query: 286 NLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN 345
N ++D+ RLE+VFS++GK V+ +V+ D TG+S+GFGFV+ S A+ ++G++
Sbjct: 196 NFGDDMDDKRLEEVFSKYGKTVSVKVMTD-STGKSKGFGFVSFYSHEAAQKAVEEMNGKD 254
Query: 346 LDGRAIRVNVAEDRQRRSS 364
++G+ + V A+ + R +
Sbjct: 255 INGQLLFVGRAQKKAERQA 273
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV + +LF+K TV V +++
Sbjct: 10 ASLYVGDLHADVTED---LLFKKFSTVGP-----------------------VLSIRICR 43
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ +V + +A+KA++ + I G+ + R +R + + G
Sbjct: 44 DLVTRRSLGYAYVNFLQLADAQKALDTMNFDTIKGK-------SIRLMWSQRDAYLRKSG 96
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN L + FS GK+++++V+ D + SRG+ FV ++ + AI
Sbjct: 97 IGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SRGYAFVHFQNQMAADRAI 154
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L + V ++RQ R
Sbjct: 155 EEMNGALLKDCRLFVGRFKNRQDR 178
>gi|323303112|gb|EGA56914.1| Hrp1p [Saccharomyces cerevisiae FostersB]
Length = 550
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 39/209 (18%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E K+F+G L +D + L F K GTV + L++
Sbjct: 157 ESCKMFIGGLNWDTTEDNLREYFGKYGTV--------------------------TDLKI 190
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+ + T RSRGFGF++ ++ V+ H +DG+++ +A PR Q +
Sbjct: 191 MKDPATGRSRGFGFLSFEKPSSVDEVVKTQHI--LDGKVIDPKRAIPRDEQDKTG----- 243
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
+I+VG + +V E+ FS+ G +++A+++ D++TG+SRGFGFVT S + D
Sbjct: 244 ---KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DR 299
Query: 338 IAALDGQNLDGRAIRVNVAEDR--QRRSS 364
+ + R I + AE R Q++SS
Sbjct: 300 VCQNKFIDFKDRKIEIKRAEPRHMQQKSS 328
>gi|224128049|ref|XP_002320231.1| predicted protein [Populus trichocarpa]
gi|222861004|gb|EEE98546.1| predicted protein [Populus trichocarpa]
Length = 287
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 36/203 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+L+V NLP D L +F+ G+V EV
Sbjct: 101 CELYVCNLPRSSDIADLVEMFKPFGSVLSVEVS--------------------------R 134
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGT---QPE---RAP 273
N ET SRG G++TM +VE A AV D+ GR + V + + PE AP
Sbjct: 135 NPETGVSRGCGYITMGSVESARNAVSALDGSDVGGREMRVRYSVEISSGRRNPEALNSAP 194
Query: 274 R---VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
+E ++YVGNLPW L +F+ G VV+ARV+ DR+ G++R + F++ S
Sbjct: 195 TKHLFYESPHKLYVGNLPWSTKPDELRNLFNHFGIVVSARVLSDRKGGKNRTYAFLSFLS 254
Query: 331 ETELNDAIAALDGQNLDGRAIRV 353
+ E DA +++G R + V
Sbjct: 255 DAE-RDAALSMNGTEFYDRMLVV 276
>gi|71018821|ref|XP_759641.1| hypothetical protein UM03494.1 [Ustilago maydis 521]
gi|74701642|sp|Q4P8R9.1|PABP_USTMA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|46099399|gb|EAK84632.1| hypothetical protein UM03494.1 [Ustilago maydis 521]
Length = 651
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 11/156 (7%)
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
V+ E +S+GFGFV EA+KAV+ H D G+ L V +A + + E R +
Sbjct: 257 VLQRDEDGKSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSY 316
Query: 277 EP----------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFV 326
E G +Y+ N+P D+ RL + F+ G + + +++ +G SRGFGFV
Sbjct: 317 EAAKNEKLAKFQGVNLYLKNIPESYDDERLREEFAPFGAITSCKIM-RAPSGVSRGFGFV 375
Query: 327 TMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
S+ E N A++ ++G+ LD R + V +A+ + R
Sbjct: 376 CYSAPEEANKAVSEMNGKMLDNRPLYVALAQRKDVR 411
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 3/164 (1%)
Query: 199 NQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLT 258
N+ H A + +V N ET S G+GFV T E AE A++ + ++ + +
Sbjct: 148 NKALHDTFAAFGNILSCKVATN-ETG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVY 205
Query: 259 VNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETG 318
V PR + + +Y N+ EV + E++F++ GK+ + + D E G
Sbjct: 206 VGHHIPRKERQAKIEETRANFTNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRD-EDG 264
Query: 319 RSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
+S+GFGFV E A+ L + G+ + V A+ + R
Sbjct: 265 KSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSER 308
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 83/207 (40%), Gaps = 36/207 (17%)
Query: 159 DAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVI 218
+ L+VG L V L +F GT V+ ++V
Sbjct: 46 NTSLYVGELDPSVTEAMLFEIFSMIGT--------------------------VASIRVC 79
Query: 219 YNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP 278
+ T RS G+ +V + E+A+E + I R + + +R P +
Sbjct: 80 RDAVTRRSLGYAYVNFLNAADGERAMEQLNYSLIRNRPCRIMWS-------QRDPALRRT 132
Query: 279 G-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
G I++ NL +DN L F+ G +++ +V + ETG S G+GFV + A
Sbjct: 133 GQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKVATN-ETG-SLGYGFVHYETAEAAEAA 190
Query: 338 IAALDGQNLDGRAIRVNVAEDRQRRSS 364
I ++G L+ + + V R+ R +
Sbjct: 191 IKHVNGMLLNDKKVYVGHHIPRKERQA 217
>gi|378733387|gb|EHY59846.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 503
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 34/206 (16%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFVGNL ++VD L FE+ G + S ++++ +R
Sbjct: 259 LFVGNLSWNVDENWLRSEFEEFGEL--------------------------SGVRLMTDR 292
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAP-------- 273
+T RS+GFG+V +A KA ++DGR L V+ A R + A
Sbjct: 293 QTGRSKGFGYVEFVDAADAAKAYAAKQGAELDGRPLNVDFANARSNDNKPADNRRKSYGD 352
Query: 274 RVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
++ EP +++GNL ++ + + F+ HG V+ R+ DRETG +GFG+VT S E
Sbjct: 353 QLGEPTDTLFLGNLSFDCTQEDVSEAFAPHGTVMGIRLPTDRETGAPKGFGYVTFGSVDE 412
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDR 359
A+ A+ G + R IR++ ++ R
Sbjct: 413 AKAALEAMQGGYIKNRPIRLDYSQPR 438
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++VGNL W VD L F E G++ R++ DR+TGRS+GFG+V + A
Sbjct: 256 GPNLFVGNLSWNVDENWLRSEFEEFGELSGVRLMTDRQTGRSKGFGYVEFVDAADAAKAY 315
Query: 339 AALDGQNLDGRAIRVNVAEDR 359
AA G LDGR + V+ A R
Sbjct: 316 AAKQGAELDGRPLNVDFANAR 336
>gi|365763141|gb|EHN04671.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 534
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 39/209 (18%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E K+F+G L +D + L F K GTV + L++
Sbjct: 157 ESCKMFIGGLNWDTTEDNLREYFGKYGTV--------------------------TDLKI 190
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+ + T RSRGFGF++ ++ V+ H +DG+++ +A PR Q +
Sbjct: 191 MKDPATGRSRGFGFLSFEKPSSVDEVVKTQHI--LDGKVIDPKRAIPRDEQDKTG----- 243
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
+I+VG + +V E+ FS+ G +++A+++ D++TG+SRGFGFVT S + D
Sbjct: 244 ---KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DR 299
Query: 338 IAALDGQNLDGRAIRVNVAEDR--QRRSS 364
+ + R I + AE R Q++SS
Sbjct: 300 VCQNKFIDFKDRKIEIKRAEPRHMQQKSS 328
>gi|323307358|gb|EGA60637.1| Hrp1p [Saccharomyces cerevisiae FostersO]
Length = 534
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 39/209 (18%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E K+F+G L +D + L F K GTV + L++
Sbjct: 157 ESCKMFIGGLNWDTTEDNLREYFGKYGTV--------------------------TDLKI 190
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+ + T RSRGFGF++ ++ V+ H +DG+++ +A PR Q +
Sbjct: 191 MKDPATGRSRGFGFLSFEKPSSVDEVVKTQHI--LDGKVIDPKRAIPRDEQDKTG----- 243
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
+I+VG + +V E+ FS+ G +++A+++ D++TG+SRGFGFVT S + D
Sbjct: 244 ---KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DR 299
Query: 338 IAALDGQNLDGRAIRVNVAEDR--QRRSS 364
+ + R I + AE R Q++SS
Sbjct: 300 VCQNKFIDFKDRKIEIKRAEPRHMQQKSS 328
>gi|302788860|ref|XP_002976199.1| hypothetical protein SELMODRAFT_151090 [Selaginella moellendorffii]
gi|300156475|gb|EFJ23104.1| hypothetical protein SELMODRAFT_151090 [Selaginella moellendorffii]
Length = 343
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 38/209 (18%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
P KLFV L ++ S+ L FE+ G +E
Sbjct: 77 PAHRKLFVRGLAWETTSQDLRDAFEQFGEIEEGA-------------------------- 110
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA----APRGTQPERA 272
VI ++ T +SRGFGF+T ++ A++A++ + IDGR+ N A + G ++A
Sbjct: 111 VIIDKATGKSRGFGFITFKHMDSAQRALKEPSK-TIDGRITVCNLASVGTSGSGGTNDQA 169
Query: 273 PRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSET 332
R ++Y+G L +E N L +FS++G++ V YD+ T +SRGF FVT +
Sbjct: 170 QR------KLYIGGLSYETSNETLLNIFSKYGEIEEGAVAYDKNTNKSRGFAFVTYKTVE 223
Query: 333 ELNDAIAALDGQNLDGRAIRVNVAEDRQR 361
+AI + + ++GR + V +A + Q+
Sbjct: 224 AARNAIDDPN-KTIEGRHVIVKLAAEGQK 251
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 35/135 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL++G L Y+ +E L +F K G +E V Y+
Sbjct: 172 KLYIGGLSYETSNETLLNIFSKYGEIEEGAVA--------------------------YD 205
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA-------APRGTQPERAP 273
+ T++SRGF FVT TVE A A++ ++ I+GR + V A AP+ + P + P
Sbjct: 206 KNTNKSRGFAFVTYKTVEAARNAIDDPNK-TIEGRHVIVKLAAEGQKEKAPQVSAPSQGP 264
Query: 274 RVFEPGFRIYVGNLP 288
+ +PG+ + N+P
Sbjct: 265 QA-QPGYNVVNPNIP 278
>gi|163847418|ref|YP_001635462.1| RNP-1 like RNA-binding protein [Chloroflexus aurantiacus J-10-fl]
gi|222525267|ref|YP_002569738.1| RNP-1 like RNA-binding protein [Chloroflexus sp. Y-400-fl]
gi|163668707|gb|ABY35073.1| RNP-1 like RNA-binding protein [Chloroflexus aurantiacus J-10-fl]
gi|222449146|gb|ACM53412.1| RNP-1 like RNA-binding protein [Chloroflexus sp. Y-400-fl]
Length = 100
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VGNL W VD+A LE F ++G V +ARV+ DRETGRSRGFGFV M ++ I+
Sbjct: 4 KLFVGNLAWSVDDATLEAFFQDYGDVRSARVINDRETGRSRGFGFVEMEV-ADVATVISQ 62
Query: 341 LDGQNLDGRAIRVNVAEDRQRRS 363
+G+ ++GR IRVN AED+ R
Sbjct: 63 TNGRPINGREIRVNEAEDKGSRG 85
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 27/109 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
KLFVGNL + VD L F+ G V A +VI
Sbjct: 3 VKLFVGNLAWSVDDATLEAFFQDYGDVRSA--------------------------RVIN 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQ 268
+RET RSRGFGFV M V + + + I+GR + VN+A +G++
Sbjct: 37 DRETGRSRGFGFVEME-VADVATVISQTNGRPINGREIRVNEAEDKGSR 84
>gi|414153680|ref|ZP_11410002.1| RNP-1 like RNA-binding protein [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
gi|411454701|emb|CCO07906.1| RNP-1 like RNA-binding protein [Desulfotomaculum hydrothermale Lam5
= DSM 18033]
Length = 84
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 11/87 (12%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA---- 337
+YVGNLPW L++ FS++G+V ++RV+ DRETGRSRGFGFV E+NDA
Sbjct: 4 LYVGNLPWATKAEDLQEAFSQYGEVFSSRVITDRETGRSRGFGFV------EVNDADVEK 57
Query: 338 -IAALDGQNLDGRAIRVNVAEDRQRRS 363
+AAL+G L GR I VN A+ R+ R+
Sbjct: 58 MVAALNGTELGGRIITVNEAKAREPRT 84
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 27/106 (25%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VGNLP+ +E L F + G V F ++ VI
Sbjct: 2 ATLYVGNLPWATKAEDLQEAFSQYGEV----------FSSR----------------VIT 35
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+RET RSRGFGFV ++ + EK V + ++ GR++TVN+A R
Sbjct: 36 DRETGRSRGFGFVEVNDA-DVEKMVAALNGTELGGRIITVNEAKAR 80
>gi|375143372|ref|YP_005005813.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
gi|361057418|gb|AEV96409.1| RNP-1 like RNA-binding protein [Niastella koreensis GR20-10]
Length = 104
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 58/83 (69%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYV NL ++V + L+ F+ +G+V +A+V+ DRETGRSRGFGFV M+ E AIA L
Sbjct: 3 IYVSNLSFDVQDEDLKDFFAPYGEVSSAKVITDRETGRSRGFGFVEMTDEAASKKAIAEL 62
Query: 342 DGQNLDGRAIRVNVAEDRQRRSS 364
DG ++ R I V+VA+ R+ RSS
Sbjct: 63 DGATVENRTISVSVAKPREERSS 85
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 29/113 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NL +DV E L F G V A +VI +R
Sbjct: 3 IYVSNLSFDVQDEDLKDFFAPYGEVSSA--------------------------KVITDR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
ET RSRGFGFV M+ ++KA+ ++ R ++V+ A PR ER+ R
Sbjct: 37 ETGRSRGFGFVEMTDEAASKKAIAELDGATVENRTISVSVAKPR---EERSSR 86
>gi|323331635|gb|EGA73049.1| Hrp1p [Saccharomyces cerevisiae AWRI796]
Length = 521
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 39/209 (18%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E K+F+G L +D + L F K GTV + L++
Sbjct: 144 ESCKMFIGGLNWDTTEDNLREYFGKYGTV--------------------------TDLKI 177
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+ + T RSRGFGF++ ++ V+ H +DG+++ +A PR Q +
Sbjct: 178 MKDPATGRSRGFGFLSFEKPSSVDEVVKTQHI--LDGKVIDPKRAIPRDEQDKTG----- 230
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
+I+VG + +V E+ FS+ G +++A+++ D++TG+SRGFGFVT S + D
Sbjct: 231 ---KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DR 286
Query: 338 IAALDGQNLDGRAIRVNVAEDR--QRRSS 364
+ + R I + AE R Q++SS
Sbjct: 287 VCQNKFIDFKDRKIEIKRAEPRHMQQKSS 315
>gi|6324449|ref|NP_014518.1| Hrp1p [Saccharomyces cerevisiae S288c]
gi|2500574|sp|Q99383.1|HRP1_YEAST RecName: Full=Nuclear polyadenylated RNA-binding protein 4;
AltName: Full=Cleavage factor IB; Short=CFIB
gi|1016290|gb|AAA79097.1| nuclear polyadenylated RNA-binding protein [Saccharomyces
cerevisiae]
gi|1420003|emb|CAA99142.1| HRP1 [Saccharomyces cerevisiae]
gi|1550721|emb|CAA64546.1| RNA binding protein [Saccharomyces cerevisiae]
gi|1657691|gb|AAB18142.1| Hrp1p [Saccharomyces cerevisiae]
gi|285814768|tpg|DAA10661.1| TPA: Hrp1p [Saccharomyces cerevisiae S288c]
gi|349581049|dbj|GAA26207.1| K7_Hrp1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296592|gb|EIW07694.1| Hrp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 534
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 39/209 (18%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E K+F+G L +D + L F K GTV + L++
Sbjct: 157 ESCKMFIGGLNWDTTEDNLREYFGKYGTV--------------------------TDLKI 190
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+ + T RSRGFGF++ ++ V+ H +DG+++ +A PR Q +
Sbjct: 191 MKDPATGRSRGFGFLSFEKPSSVDEVVKTQHI--LDGKVIDPKRAIPRDEQDKTG----- 243
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
+I+VG + +V E+ FS+ G +++A+++ D++TG+SRGFGFVT S + D
Sbjct: 244 ---KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DR 299
Query: 338 IAALDGQNLDGRAIRVNVAEDR--QRRSS 364
+ + R I + AE R Q++SS
Sbjct: 300 VCQNKFIDFKDRKIEIKRAEPRHMQQKSS 328
>gi|412985322|emb|CCO20347.1| predicted protein [Bathycoccus prasinos]
Length = 789
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 104/215 (48%), Gaps = 35/215 (16%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
P + KL+V NLP V +E+L +FEK G V +
Sbjct: 503 PDDKNKLYVANLPPHVTNEQLRPIFEKFGRV--------------------------TAC 536
Query: 216 QVIYNRETDRS-RGFGFVTMSTVEEAEKAVEMFHRYDIDGRLL-TVNKAAPR-----GTQ 268
V+ +R+ S +GF FVT +T EA A+ + I+GR++ T K P+ +
Sbjct: 537 DVVPDRDKQLSCKGFAFVTFATEVEARSAIPHTNGMTIEGRVVETRIKNEPKVPIHNASG 596
Query: 269 PERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTM 328
+ A ++YV NLP + L+ +FS +G V + ++V D TG S+G+GFV M
Sbjct: 597 GDTAQEDVNEEAKLYVANLPSHYEEEDLKTLFSPYGLVQSVKLVLDHTTGLSKGYGFVQM 656
Query: 329 SSETELNDAIAALDGQNLDG--RAIRVNVAEDRQR 361
+ + A+ A+ G ++G + + VN+A D++R
Sbjct: 657 MDQEQAMSAVVAVHGNMVEGCTKPLVVNIANDKKR 691
>gi|194693774|gb|ACF80971.1| unknown [Zea mays]
Length = 133
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + AI
Sbjct: 8 YRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIE 67
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 68 GMNGKELDGRNITVNEAQ 85
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 26/102 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
+ FVG L + D L F G E+ E K +I +
Sbjct: 9 RCFVGGLAWATDDHSLNNAFSTYG--EVLESK------------------------IILD 42
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
RET RSRGFGFVT ST + A+E + ++DGR +TVN+A
Sbjct: 43 RETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEA 84
>gi|359482522|ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]
Length = 501
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 105/242 (43%), Gaps = 41/242 (16%)
Query: 127 EGEDTVVEAGERQEESGEEGVFEEEE-------FVEPPEDA-KLFVGNLPYDVDSEKLAM 178
+GED E E++E+ G G ++ E E ED KLFVG + ++ E
Sbjct: 160 DGEDD--EVSEKKEKKGTRGKRKQAEGNDDDDWMGESDEDKEKLFVGGISWETSEEIFTN 217
Query: 179 LFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVE 238
F G + + ++ +R T R RGFGF+T +
Sbjct: 218 YFSNYGEITDS--------------------------VIMMDRHTGRPRGFGFITFADPA 251
Query: 239 EAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQ 298
A+K +E H IDGR + V K PR R +I+VG +P + L+
Sbjct: 252 VADKVLEEDHV--IDGRAVEVKKTVPREGMEVRGVSKTR---KIFVGGIPSSLTEDELKD 306
Query: 299 VFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAED 358
FS +G +V +++ D TGRSRGFGFVT SE + + L G+ + + AE
Sbjct: 307 YFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAVERLFSEGKTHELGGKLVEIKKAEP 366
Query: 359 RQ 360
++
Sbjct: 367 KR 368
>gi|358334962|dbj|GAA31742.2| polyadenylate-binding protein, partial [Clonorchis sinensis]
Length = 738
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 39/212 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V N P D EKL +F E E+K C V
Sbjct: 182 IYVKNFPPDTTDEKLRDMFS-----EFGEIK-------------SCCV---------EKN 214
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPE---------RA 272
+S+GFGFV + AE+AV + H +I+GR L ++A + + E RA
Sbjct: 215 PEGKSKGFGFVCFHDPDHAEQAVRVMHGKEINGRALYASRAQRKEERQEELKQRLEKQRA 274
Query: 273 PRV--FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
R+ + PG +YV NL +D+ RL++ FS +G + +A+V+ D GRS+GFGFV +
Sbjct: 275 ERLSKYVPGVNLYVKNLDDNIDDERLKEAFSHYGPITSAKVMTD-ANGRSKGFGFVCFTQ 333
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
+ A+ ++ + + + V +A+ ++ R
Sbjct: 334 PEQAARAVTEMNATLVGSKPLYVALAQRKEDR 365
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV-FEPGF 280
E S+G+GFV E AE+A+E + I+ R++ V K P + + ++ F
Sbjct: 124 EHGNSKGYGFVHFEKEECAERAIEKINGMMINDRVVYVGKFIPSSDRKSASGKLRFN--- 180
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
IYV N P + + +L +FSE G++ + V + E G+S+GFGFV A+
Sbjct: 181 NIYVKNFPPDTTDEKLRDMFSEFGEIKSCCVEKNPE-GKSKGFGFVCFHDPDHAEQAVRV 239
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
+ G+ ++GRA+ + A+ ++ R
Sbjct: 240 MHGKEINGRALYASRAQRKEER 261
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV 275
++ + T S G+G+V ++AE+A+E + GR + + + +R P +
Sbjct: 31 RICRDLATRNSLGYGYVNFEEPKDAERALENLNYESFMGRPIRIMWS-------QRDPSL 83
Query: 276 FEPG-FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
+ G I++ NL +D +L FS GK+++ ++ D E G S+G+GFV E
Sbjct: 84 RKSGKGNIFIKNLDKTIDQKQLYDTFSFIGKILSCKIAMD-EHGNSKGYGFVHFEKEECA 142
Query: 335 NDAIAALDGQNLDGRAIRV 353
AI ++G ++ R + V
Sbjct: 143 ERAIEKINGMMINDRVVYV 161
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVG+L A L FSE G V++AR+ D T S G+G+V + A+ L
Sbjct: 3 LYVGDLHPLATEALLYSKFSEIGTVLSARICRDLATRNSLGYGYVNFEEPKDAERALENL 62
Query: 342 DGQNLDGRAIRV 353
+ ++ GR IR+
Sbjct: 63 NYESFMGRPIRI 74
>gi|313219101|emb|CBY43303.1| unnamed protein product [Oikopleura dioica]
Length = 512
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 37/213 (17%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
LFV NLP D++ L FE+ G EV H +VI +
Sbjct: 184 LFVKNLPDSWDTDALLENFEQFG-----EVVSH---------------------KVICDE 217
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP--- 278
T S+ GF++ ++AE AVE+ H +I+G+ L +A + + +E
Sbjct: 218 TTGLSKCHGFISFKEHDQAEAAVEIMHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQ 277
Query: 279 -------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL +D+ L + F + G + +A+V+ D GRS+GFGFV SS
Sbjct: 278 ERIQRYQGVNLYVKNLDDSIDDEGLREAFKQFGNITSAKVITDL-NGRSKGFGFVCFSSP 336
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
E A+ ++G+ G+ + V +A+ ++ R +
Sbjct: 337 EEATKAVTEMNGRIFGGKPLYVGLAQRKEDRKA 369
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 88/203 (43%), Gaps = 28/203 (13%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+F+ NL +D++ L F G + +V VC +
Sbjct: 92 VFIKNLDRSIDNKALYDTFSSFGNILSCKV--------------VCDI------------ 125
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
+ S+GFGFV + E A++A+E + ++ + + V + R + +
Sbjct: 126 --NGSKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARFKSRNDRMREFGDAAKHFTN 183
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
++V NLP D L + F + G+VV+ +V+ D TG S+ GF++ + A+ +
Sbjct: 184 LFVKNLPDSWDTDALLENFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVEIM 243
Query: 342 DGQNLDGRAIRVNVAEDRQRRSS 364
+ ++G+ + A+ + RSS
Sbjct: 244 HEKEIEGKKLYCGRAQKKAERSS 266
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVG+L ++ A L F G V++ RV D T RS G+ +V DA AL
Sbjct: 4 LYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPA---DAERAL 60
Query: 342 DGQNLD---GRAIRV 353
D N D G+ IR+
Sbjct: 61 DTMNFDVIKGKPIRI 75
>gi|225430808|ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
Length = 373
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 102/206 (49%), Gaps = 34/206 (16%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
+DA +VGNL V E L LF +AG V +++V
Sbjct: 23 QDATAYVGNLDPQVTEELLWELFVQAGPV---------------VNVYVPK--------- 58
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+R T+ +G+GFV + E+A+ A+++ + + G+ + VNKA+ + + +
Sbjct: 59 --DRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-------QDKKSLD 109
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVV-NARVVYDRETGRSRGFGFVTMSSETELND 336
G ++VGNL +VD L FS G +V N +++ D +TG SRGFGFV+ S +
Sbjct: 110 VGANLFVGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDA 169
Query: 337 AIAALDGQNLDGRAIRVNVAEDRQRR 362
AI A++GQ L R I V+ A + +
Sbjct: 170 AIEAMNGQYLCNRQITVSYAYKKDTK 195
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 25/112 (22%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LFVGNL DVD + L F G + V+ +++
Sbjct: 112 ANLFVGNLDPDVDEKLLYDTFSAFGVI-------------------------VTNPKIMR 146
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
+ +T SRGFGFV+ + E ++ A+E + + R +TV+ A + T+ ER
Sbjct: 147 DPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGER 198
>gi|119492303|ref|ZP_01623650.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
gi|119453188|gb|EAW34355.1| RNA-binding region protein [Lyngbya sp. PCC 8106]
Length = 101
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 55/84 (65%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNL +EV L+ VF+E+G V + DRETGR RGF FV M E++ + AI AL
Sbjct: 3 IYVGNLSYEVTEEDLKSVFAEYGTVQRVSIPTDRETGRPRGFAFVEMQEESKEDAAIEAL 62
Query: 342 DGQNLDGRAIRVNVAEDRQRRSSF 365
DG GR ++VN A R++RSSF
Sbjct: 63 DGAEWMGRDLKVNKARPREKRSSF 86
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNL Y+V E L +F + GTV+ + + +R
Sbjct: 3 IYVGNLSYEVTEEDLKSVFAEYGTVQ--------------------------RVSIPTDR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET R RGF FV M + + A+E + GR L VNKA PR
Sbjct: 37 ETGRPRGFAFVEMQEESKEDAAIEALDGAEWMGRDLKVNKARPR 80
>gi|20257675|gb|AAM16003.1| glycine-rich RNA binding protein [Zea mays]
Length = 156
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + AI
Sbjct: 18 YRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIE 77
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 78 GMNGKELDGRNITVNEAQ 95
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 52/116 (44%), Gaps = 26/116 (22%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
V E EE + + FVG L + D L F G E+ E K
Sbjct: 5 VGEREEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYG--EVLESK-------------- 48
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+I +RET RSRGFGFVT ST + A+E + ++DGR +TVN+A
Sbjct: 49 ----------IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEA 94
>gi|20257669|gb|AAM16000.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + AI
Sbjct: 18 YRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIE 77
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 78 GMNGKELDGRNITVNEAQ 95
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 52/116 (44%), Gaps = 26/116 (22%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
V E EE + + FVG L + D L F G E+ E K
Sbjct: 5 VGEREEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYG--EVLESK-------------- 48
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+I +RET RSRGFGFVT ST + A+E + ++DGR +TVN+A
Sbjct: 49 ----------IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEA 94
>gi|434399674|ref|YP_007133678.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
gi|428270771|gb|AFZ36712.1| RNP-1 like RNA-binding protein [Stanieria cyanosphaera PCC 7437]
Length = 94
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 56/83 (67%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNL +E+ LE+VF+E+G V + DRETGR RGF FV M +E E AI+AL
Sbjct: 3 IYVGNLDYEISQQDLEEVFTEYGTVKRVHLPTDRETGRKRGFAFVEMGTEAEEASAISAL 62
Query: 342 DGQNLDGRAIRVNVAEDRQRRSS 364
DG GR+++VN A R++R+S
Sbjct: 63 DGAEWMGRSLKVNQARPREQRNS 85
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNL Y++ + L +F + GTV+ + + +R
Sbjct: 3 IYVGNLDYEISQQDLEEVFTEYGTVK--------------------------RVHLPTDR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET R RGF FV M T E A+ + GR L VN+A PR
Sbjct: 37 ETGRKRGFAFVEMGTEAEEASAISALDGAEWMGRSLKVNQARPR 80
>gi|335293857|ref|XP_003357073.1| PREDICTED: polyadenylate-binding protein 4-like [Sus scrofa]
Length = 370
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 107/213 (50%), Gaps = 20/213 (9%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVF--YVSLL 215
+D +LFVG D E A L KA +K FG+ + VF Y L
Sbjct: 163 KDCRLFVGRFKNRKDRE--AELQNKANEFTNVYIKN---FGDDMDDERLKEVFSKYGKTL 217
Query: 216 QVIYNRETD-RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
V R++ +S+GFGFV+ + E A+KAVE + DI+G+LL V +A + + +
Sbjct: 218 SVKVMRDSSGKSKGFGFVSFDSHEAAKKAVEEMNGKDINGQLLFVGRAQKKAERQAELKQ 277
Query: 275 VFE----------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFG 324
+FE G ++Y+ NL +D+ +L + FS G + +V+ +E GRS+GFG
Sbjct: 278 MFEQLKRERFRRCQGVKLYIKNLDETIDDEKLRREFSSFGSISRVKVM--QEEGRSKGFG 335
Query: 325 FVTMSSETELNDAIAALDGQNLDGRAIRVNVAE 357
+ SS E A+ ++G+ L + + + +A+
Sbjct: 336 LICFSSPEEATKAMTEMNGRILGSKPLNIALAQ 368
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVG 285
SRG+ FV A++A+E + + L V + R + +Y+
Sbjct: 136 SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKNRKDREAELQNKANEFTNVYIK 195
Query: 286 NLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN 345
N ++D+ RL++VFS++GK ++ +V+ D +G+S+GFGFV+ S A+ ++G++
Sbjct: 196 NFGDDMDDERLKEVFSKYGKTLSVKVMRD-SSGKSKGFGFVSFDSHEAAKKAVEEMNGKD 254
Query: 346 LDGRAIRVNVAEDRQRRSS 364
++G+ + V A+ + R +
Sbjct: 255 INGQLLFVGRAQKKAERQA 273
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV + +LF+K TV V +++
Sbjct: 10 ASLYVGDLHADVTED---LLFKKFSTVGP-----------------------VLSIRICR 43
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ +V + +A+KA++ + I G+ + R +R + + G
Sbjct: 44 DLVTRRSLGYAYVNFLQLADAQKALDTMNFDLIKGK-------SIRLMWSQRDAYLRKSG 96
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN L + FS GK+++++V+ D + SRG+ FV ++ + AI
Sbjct: 97 IGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG--SRGYAFVHFQNQIAADRAI 154
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L + V ++R+ R
Sbjct: 155 EEMNGALLKDCRLFVGRFKNRKDR 178
>gi|323346676|gb|EGA80960.1| Hrp1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 576
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 39/209 (18%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E K+F+G L +D + L F K GTV + L++
Sbjct: 157 ESCKMFIGGLNWDTTEDNLREYFGKYGTV--------------------------TDLKI 190
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+ + T RSRGFGF++ ++ V+ H +DG+++ +A PR Q +
Sbjct: 191 MKDPATGRSRGFGFLSFEKPSSVDEVVKTQHI--LDGKVIDPKRAIPRDEQDKTG----- 243
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
+I+VG + +V E+ FS+ G +++A+++ D++TG+SRGFGFVT S + D
Sbjct: 244 ---KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DR 299
Query: 338 IAALDGQNLDGRAIRVNVAEDR--QRRSS 364
+ + R I + AE R Q++SS
Sbjct: 300 VCQNKFIDFKDRKIEIKRAEPRHMQQKSS 328
>gi|259149364|emb|CAY86168.1| Hrp1p [Saccharomyces cerevisiae EC1118]
Length = 534
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 39/209 (18%)
Query: 158 EDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQV 217
E K+F+G L +D + L F K GTV + L++
Sbjct: 157 ESCKMFIGGLNWDTTEDNLREYFGKYGTV--------------------------TDLKI 190
Query: 218 IYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE 277
+ + T RSRGFGF++ ++ V+ H +DG+++ +A PR Q +
Sbjct: 191 MKDPATGRSRGFGFLSFEKPSSVDEVVKTQHI--LDGKVIDPKRAIPRDEQDKTG----- 243
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
+I+VG + +V E+ FS+ G +++A+++ D++TG+SRGFGFVT S + D
Sbjct: 244 ---KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAV-DR 299
Query: 338 IAALDGQNLDGRAIRVNVAEDR--QRRSS 364
+ + R I + AE R Q++SS
Sbjct: 300 VCQNKFIDFKDRKIEIKRAEPRHMQQKSS 328
>gi|115396600|ref|XP_001213939.1| predicted protein [Aspergillus terreus NIH2624]
gi|114193508|gb|EAU35208.1| predicted protein [Aspergillus terreus NIH2624]
Length = 282
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 155 EPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSL 214
EP ++VGNL YDV +E L EK G VE + F N+G
Sbjct: 94 EPTPKETVYVGNLFYDVTAEDLRKQMEKYGVVE----QVFITFDNRGI------------ 137
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
SRGFG+V T+E A++A+ H +GR + V + A P+R+ R
Sbjct: 138 -----------SRGFGYVQFDTIESAKRAISAMHMRVFEGRRVVV-QYAQNNVAPQRSMR 185
Query: 275 VFEPGFR-IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
P R +Y+GNL +E + L ++F + V++ RV DR TG RGF +
Sbjct: 186 ---PATRTLYIGNLSFETTDRDLNELFRDVVNVIDVRVSVDRRTGLFRGFAHAEFINVES 242
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDRQR 361
L + GR +R++ +E +R
Sbjct: 243 ARIGYEILSRKTPYGRKLRIDYSETNRR 270
>gi|193650237|ref|XP_001943392.1| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 650
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 40/214 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+++ N+ +V+ ++L +F+K GT+ +V F +
Sbjct: 185 VYIKNIDENVNEKELFEMFKKYGTITSCKVMF---------------------------K 217
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFH-RYDIDGRLLTVNKAAPRGTQPERAPRVFEP-- 278
+ SRGFGFV +EAEKAV H + +G+ VN+A + + + R FE
Sbjct: 218 DDGSSRGFGFVAFEDPKEAEKAVTELHGKKSPEGKTYYVNRAQKKTERQQELKRKFEQYK 277
Query: 279 --------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +YV NL +D+ RL + FS G + +A+V+ D GRS+GFGFV SS
Sbjct: 278 IERINRYQGVNLYVKNLDDTIDDERLRREFSAFGTIKSAKVMMD--DGRSKGFGFVYFSS 335
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 336 PEEATKAVTDMNGRIVGTKPLYVTLAQRKKDRKA 369
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 37/196 (18%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AMLFEK T V A+ + + + +
Sbjct: 2 ASLYVGDLHSDVTE---AMLFEKFST--------------------VGAILSIRVCRHVI 38
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAP-RGTQPERAPRVFEP 278
R S G+ +V + +AE+A++ + +DI K P R +R P + +
Sbjct: 39 TRS---SLGYAYVNFQNIADAERALDTMN-FDIL-------KGHPMRIMWSQRDPSLRKS 87
Query: 279 GF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
G +++ NL +DN + FS G +++ +V D ETG S+G+GFV ++ +
Sbjct: 88 GVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQD-ETGNSKGYGFVHFETKQSATQS 146
Query: 338 IAALDGQNLDGRAIRV 353
I ++G L+G+ + V
Sbjct: 147 IEKVNGMLLNGKKVFV 162
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
ET S+G+GFV T + A +++E + ++G+ + V + R + + + +
Sbjct: 125 ETGNSKGYGFVHFETKQSATQSIEKVNGMLLNGKKVFVGRFVGRNDREKELGQRAKLYTN 184
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+Y+ N+ V+ L ++F ++G + + +V++ ++ G SRGFGFV E A+ L
Sbjct: 185 VYIKNIDENVNEKELFEMFKKYGTITSCKVMF-KDDGSSRGFGFVAFEDPKEAEKAVTEL 243
Query: 342 DG-QNLDGRAIRVNVAEDRQRR 362
G ++ +G+ VN A+ + R
Sbjct: 244 HGKKSPEGKTYYVNRAQKKTER 265
>gi|56758360|gb|AAW27320.1| SJCHGC06322 protein [Schistosoma japonicum]
Length = 721
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 39/212 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
L+V N P + D+EKL +F + G ++ A V + N+G
Sbjct: 194 LYVKNFPPETDNEKLKEMFSEFGEIKSACV----MKDNEG-------------------- 229
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR---------GTQPERA 272
+S+GFGFV + AE AV H +I+GR+L +A + + +RA
Sbjct: 230 ---KSKGFGFVCYLDPDHAENAVRTMHGKEIEGRVLYCARAQRKEERQEELKQKIEKQRA 286
Query: 273 PRV--FEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
R + +YV NL +D+ RLE+ FS HG + +A+V+ D RS+GFGFV ++
Sbjct: 287 ERQSNYMLNVNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKD-ANNRSKGFGFVCFAN 345
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
+ A+ ++G + + + V +A+ ++ R
Sbjct: 346 PEQAARAVTDMNGTIIGSKPLYVALAQRKEDR 377
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 81/142 (57%), Gaps = 5/142 (3%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV-FEPGF 280
E +S+G+GFV E AE+A+E + I R++ V K P+ + +A +V F
Sbjct: 136 ENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKFIPKTERKSQARKVKFN--- 192
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+YV N P E DN +L+++FSE G++ +A V+ D E G+S+GFGFV +A+
Sbjct: 193 NLYVKNFPPETDNEKLKEMFSEFGEIKSACVMKDNE-GKSKGFGFVCYLDPDHAENAVRT 251
Query: 341 LDGQNLDGRAIRVNVAEDRQRR 362
+ G+ ++GR + A+ ++ R
Sbjct: 252 MHGKEIEGRVLYCARAQRKEER 273
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRV 275
+V + T +S G+G+V + AE+A+E+ + + GR + + +R P +
Sbjct: 43 RVCRDLATRQSLGYGYVNFEDPKHAEQALEVLNYEPLMGRPIRI-------MWSQRDPSL 95
Query: 276 FEPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETEL 334
+ G I++ NL ++ L FS G++++ ++V D E G+S+G+GFV E
Sbjct: 96 RKSGKGNIFIKNLDKSIEQKELYDTFSFFGRILSCKIVMD-ENGQSKGYGFVHFEKEECA 154
Query: 335 NDAIAALDGQNLDGRAIRV 353
AI ++ + R + V
Sbjct: 155 ERAIEKINNMIIRDRVVYV 173
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVG+L V ++ L+ FSE G V++ARV D T +S G+G+V A+ L
Sbjct: 15 LYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRQSLGYGYVNFEDPKHAEQALEVL 74
Query: 342 DGQNLDGRAIRV 353
+ + L GR IR+
Sbjct: 75 NYEPLMGRPIRI 86
>gi|261351264|gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]
Length = 202
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 56/81 (69%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R ++GNL W + L+ F + G +V+A+VV D+ +GRSRGFGFVT + + DAI
Sbjct: 7 YRCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDDKRAMEDAIE 66
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
A++G +LDGRAI V+ A+ +Q
Sbjct: 67 AMNGMDLDGRAITVDKAQPQQ 87
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 33/117 (28%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCA 208
EE+E+ + F+GNL + L FEK G + A
Sbjct: 3 EEDEY-------RCFIGNLSWSTSDRGLKDAFEKFGNLVDA------------------- 36
Query: 209 VFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+V+ ++ + RSRGFGFVT E A+E + D+DGR +TV+KA P+
Sbjct: 37 -------KVVLDKFSGRSRGFGFVTFDDKRAMEDAIEAMNGMDLDGRAITVDKAQPQ 86
>gi|171056877|ref|YP_001789226.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
gi|170774322|gb|ACB32461.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
Length = 157
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 56/82 (68%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNL + V + L + FS+ G V +A+V+ DRETGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLAYSVRDEDLNEAFSQFGAVNSAKVMMDRETGRSKGFGFVEMGSDPEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQ 360
L+GQ + GRAI VN A R+
Sbjct: 62 NGLNGQAIGGRAIVVNEARPRE 83
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 26/109 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL Y V E L F + G V A +V+ +
Sbjct: 4 KLYVGNLAYSVRDEDLNEAFSQFGAVNSA--------------------------KVMMD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQP 269
RET RS+GFGFV M + EA+ A+ + I GR + VN+A PR +P
Sbjct: 38 RETGRSKGFGFVEMGSDPEAQAAINGLNGQAIGGRAIVVNEARPREDKP 86
>gi|50308683|ref|XP_454345.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643480|emb|CAG99432.1| KLLA0E08779p [Kluyveromyces lactis]
Length = 475
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 112/238 (47%), Gaps = 46/238 (19%)
Query: 136 GERQEESGEEGVFEEEEFVEP---------PEDAKLFVGNLPYDVDSEKLAMLFEKAGTV 186
GE+Q+E G+E E++ P D L+VGNLP +D + L F+ G++
Sbjct: 68 GEKQQEEGDE----EDDSAAPVLATQGGREKSDKILYVGNLPKSIDDDLLKQYFQIGGSI 123
Query: 187 EIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEM 246
S +++I ++ + + FV +A A +
Sbjct: 124 --------------------------SSVKIIPDKNSQECN-YAFVEYFEPHDANVAYQT 156
Query: 247 FHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKV 306
+ +++G++L +N A Q ++ + F ++VG+L +VD+A L F E
Sbjct: 157 LNGKEVEGKVLKINWA----FQSQQVNS--DETFNLFVGDLNVDVDDATLAGTFKEFPSF 210
Query: 307 VNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
+ A V++D ++GRSRG+GFV+ + + A+ G L+GRA+R+N A R+ + S
Sbjct: 211 IQAHVMWDMQSGRSRGYGFVSFGEQDQAQVAMETKQGFELNGRALRINWASKREPQQS 268
>gi|395545876|ref|XP_003774823.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 621
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 85/153 (55%), Gaps = 12/153 (7%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
E RS+GFGFV+ +T E+A++AV+ + +++GR + V +A +G + R FE
Sbjct: 217 ERGRSKGFGFVSYATHEDAQRAVDEMNGKELNGRRIYVGRAQKKGERQTELKRHFEQIKQ 276
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL +D+ RL FS G + +A+V+ E G SRGFGFV S+
Sbjct: 277 DRVTRYQGVNLYVKNLDDTIDDERLRTEFSPFGTITSAKVMM--EGGHSRGFGFVCFSAP 334
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 335 DEAAKAVTEMNGKLVTSKPLYVALAQRKEERQA 367
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 80/145 (55%), Gaps = 13/145 (8%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR---- 281
S+G+GFV T E AEKA+E ++G +L K G R R E G R
Sbjct: 128 SKGYGFVHFETQESAEKAIE-----KMNGIVLKSLKVF-VGHFKSRKERELELGARAREF 181
Query: 282 --IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+Y+ N ++DNARL ++F G+ ++ +V+ D E GRS+GFGFV+ ++ + A+
Sbjct: 182 TNVYIKNFGEDMDNARLGEIFGRFGRALSVKVMTD-ERGRSKGFGFVSYATHEDAQRAVD 240
Query: 340 ALDGQNLDGRAIRVNVAEDRQRRSS 364
++G+ L+GR I V A+ + R +
Sbjct: 241 EMNGKELNGRRIYVGRAQKKGERQT 265
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 86/204 (42%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L +DV L F AG + + VC
Sbjct: 2 ASLYVGDLHHDVTEAMLYEKFSPAGPI---------------LSIRVCR----------- 35
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T S G+ +V +A++ +E + I G+ + + + +R P + + G
Sbjct: 36 DMITRSSLGYAYVNFQQSSDAQRVLETMNLDVIKGKPVRIMWS-------QRDPSLRKSG 88
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I+V NL +DN L FS G +++ +VV D E G S+G+GFV ++ AI
Sbjct: 89 VGNIFVKNLEKSIDNRALFDAFSGFGNILSCKVVSD-ENG-SKGYGFVHFETQESAEKAI 146
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L + V + R+ R
Sbjct: 147 EKMNGIVLKSLKVFVGHFKSRKER 170
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 51/125 (40%), Gaps = 33/125 (26%)
Query: 134 EAGERQEESGEEGVFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKF 193
+ GERQ E +++ V + L+V NL +D E+L F GT+ A+V
Sbjct: 259 KKGERQTELKRHFEQIKQDRVTRYQGVNLYVKNLDDTIDDERLRTEFSPFGTITSAKVMM 318
Query: 194 HFLFGNQGFHMWVCAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDID 253
E SRGFGFV S +EA KAV +++
Sbjct: 319 ----------------------------EGGHSRGFGFVCFSAPDEAAKAVT-----EMN 345
Query: 254 GRLLT 258
G+L+T
Sbjct: 346 GKLVT 350
>gi|195628644|gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 384
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 33/205 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
K+FVG + ++ E + FEK G + + ++
Sbjct: 55 GKIFVGGVAWETTEESFSKHFEKYGAITDS--------------------------VIMK 88
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEP 278
++ T RGFGFVT S +K +E H IDGR + V + PR + P+
Sbjct: 89 DKHTKMPRGFGFVTFSDPSVIDKVLEDDHV--IDGRTVEVKRTVPREEMITKDGPKTR-- 144
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+I++G LP + L+ FS +G VV +++ D TGRSRGFGFVT SE + I
Sbjct: 145 --KIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVI 202
Query: 339 AALDGQNLDGRAIRVNVAEDRQRRS 363
+ ++L G+ + + AE ++ S
Sbjct: 203 SEGRMRDLGGKQVEIKKAEPKKHGS 227
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 28/110 (25%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFL-FGNQGFHMWVCAVFYVSLL 215
P+ K+F+G LP + + E+K HF +GN V
Sbjct: 141 PKTRKIFIGGLPPSLTED---------------ELKDHFSSYGN------------VVEH 173
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
Q++ + T RSRGFGFVT + + E+ + D+ G+ + + KA P+
Sbjct: 174 QIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 223
>gi|195445835|ref|XP_002070507.1| GK12096 [Drosophila willistoni]
gi|194166592|gb|EDW81493.1| GK12096 [Drosophila willistoni]
Length = 385
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 97/215 (45%), Gaps = 36/215 (16%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCA 208
+++ EP KLF+G L Y E L FEK G +I +V
Sbjct: 19 DDDSITEPEHMRKLFIGGLDYRTSDENLKAHFEKWG--QIVDV----------------- 59
Query: 209 VFYVSLLQVIYNRETDRSRGFGFVTMS---TVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
V+ + T RSRGFGF+T S ++EA+KA + IDGR++ +A PR
Sbjct: 60 -------VVMKDPRTKRSRGFGFITYSHSSMIDEAQKA----RPHKIDGRVVEPKRAVPR 108
Query: 266 GTQPERAPRVFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGF 325
Q +P +++VG L + D L FS G +V+ +V D+ETG+ RGF F
Sbjct: 109 --QDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFSNFGSIVDINIVMDKETGKKRGFAF 166
Query: 326 VTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQ 360
V + D + L+G+ + V A +Q
Sbjct: 167 VEFDDYDPV-DKVVLQKQHQLNGKMVDVKKALPKQ 200
>gi|413954077|gb|AFW86726.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 401
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 94/201 (46%), Gaps = 32/201 (15%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
K+FVG + ++ E F+K G + + ++
Sbjct: 93 GKVFVGGVAWETTEETFTKHFQKYGAITDS--------------------------VIMK 126
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
++ T RGFGFVT S ++ +E H IDGR + V + P+ + P+
Sbjct: 127 DKHTRMPRGFGFVTFSDPSVLDRVLEDEHV--IDGRTVEVKRTVPKELSSKDGPKTK--- 181
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+I+VG +P + +L++ FS +GKVV +++ D TGRSRGFGFVT SE + ++
Sbjct: 182 -KIFVGGIPPSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMS 240
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
+L G+ + + AE ++
Sbjct: 241 EGRMHDLGGKQVEIKKAEPKK 261
>gi|51893978|ref|YP_076669.1| glycine-rich RNA-binding protein [Symbiobacterium thermophilum IAM
14863]
gi|51857667|dbj|BAD41825.1| glycine-rich RNA-binding protein [Symbiobacterium thermophilum IAM
14863]
Length = 86
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 50/81 (61%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
F IYVGNLPW L +F +G+V NAR++ DRETGRSRGFGFV M+ E AIA
Sbjct: 3 FSIYVGNLPWSTTPEDLRALFEPYGEVENARIITDRETGRSRGFGFVDMADEEAARRAIA 62
Query: 340 ALDGQNLDGRAIRVNVAEDRQ 360
L GR + VN A+ RQ
Sbjct: 63 ELHNYEYGGRPLTVNEAQARQ 83
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 51/104 (49%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNLP+ E L LFE G VE A ++I +R
Sbjct: 5 IYVGNLPWSTTPEDLRALFEPYGEVENA--------------------------RIITDR 38
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET RSRGFGFV M+ E A +A+ H Y+ GR LTVN+A R
Sbjct: 39 ETGRSRGFGFVDMADEEAARRAIAELHNYEYGGRPLTVNEAQAR 82
>gi|262196624|ref|YP_003267833.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
gi|262079971|gb|ACY15940.1| RNP-1 like RNA-binding protein [Haliangium ochraceum DSM 14365]
Length = 125
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 52/79 (65%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+I+VG L W+ D++ L F G V A+V+ DR+TGRSRGFGFVT + + AI
Sbjct: 4 KIFVGGLSWDTDDSSLRAAFERFGAVTEAKVITDRDTGRSRGFGFVTFAESGQAAAAIEE 63
Query: 341 LDGQNLDGRAIRVNVAEDR 359
+DG LDGR IRVN A++R
Sbjct: 64 MDGVELDGRNIRVNEAQER 82
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K+FVG L +D D L FE+ G V A +VI +
Sbjct: 4 KIFVGGLSWDTDDSSLRAAFERFGAVTEA--------------------------KVITD 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
R+T RSRGFGFVT + +A A+E ++DGR + VN+A R
Sbjct: 38 RDTGRSRGFGFVTFAESGQAAAAIEEMDGVELDGRNIRVNEAQER 82
>gi|443324398|ref|ZP_21053165.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
gi|442795980|gb|ELS05312.1| RRM domain-containing RNA-binding protein [Xenococcus sp. PCC 7305]
Length = 90
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 56/82 (68%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IYVGNL + ++ LE+VFSE+GKV + DRE+GR RGF FV MSS+ E N AI+AL
Sbjct: 3 IYVGNLDYSLEKEDLEEVFSEYGKVTRVHLPTDRESGRKRGFAFVEMSSKDEENAAISAL 62
Query: 342 DGQNLDGRAIRVNVAEDRQRRS 363
DG R ++VN A+ R+ RS
Sbjct: 63 DGAEWMERTLKVNEAKPRENRS 84
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++VGNL Y ++ E L +F + G V + + + +R
Sbjct: 3 IYVGNLDYSLEKEDLEEVFSEYGKV--------------------------TRVHLPTDR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
E+ R RGF FV MS+ +E A+ + R L VN+A PR
Sbjct: 37 ESGRKRGFAFVEMSSKDEENAAISALDGAEWMERTLKVNEAKPR 80
>gi|444726222|gb|ELW66761.1| Polyadenylate-binding protein 1-like protein [Tupaia chinensis]
Length = 568
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 41/215 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
++V NL DVD L LF + G +L V R
Sbjct: 168 IYVKNLQVDVDERGLQDLFSQFG----------------------------KMLSVKVMR 199
Query: 222 ETD-RSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE--- 277
++ SRGFGFV EEA+KAV + ++ GRLL V +A R + R FE
Sbjct: 200 DSSGHSRGFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYVGRAQKRLERQNELKRRFEQMK 259
Query: 278 -------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSS 330
G +YV NL +++ +L + FS +G + +A+V+ E G S+GFGFV SS
Sbjct: 260 QDRLNRYQGVNLYVKNLDDSINDEKLRKEFSPYGVITSAKVMT--EGGHSKGFGFVCFSS 317
Query: 331 ETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 318 PEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 352
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 215 LQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
++V + T RS + ++ +AE+A++ + I G+ + + +R P
Sbjct: 15 IRVCRDVATRRSLCYAYINFQQPADAERALDTMNFEVIKGQPIRI-------MWSQRDPG 67
Query: 275 VFEPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETE 333
+ + G I++ NL +DN L FS G +++ +VV D E G SRGFGFV +
Sbjct: 68 LRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCD-EHG-SRGFGFVHFETHDA 125
Query: 334 LNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
AI+ ++G L+ R + V + R+ R +
Sbjct: 126 AQRAISTMNGMLLNDRKVFVGHFKSRREREA 156
>gi|326531676|dbj|BAJ97842.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 33/202 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
K+FVG + ++ E + F K G + + ++
Sbjct: 62 GKIFVGGVAWETTEESFSKHFGKYGAITDS--------------------------VIMK 95
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEP 278
++ T RGFGFVT S +K +E H +IDGR + V + PR + P+
Sbjct: 96 DKHTKMPRGFGFVTFSDPSVIDKVLEDEH--NIDGRTVEVKRTVPREEMSSKDGPKTR-- 151
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+I+VG LP + L FS +G VV +++ D TGRSRGFGFVT SE + I
Sbjct: 152 --KIFVGGLPSTLTEDDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVI 209
Query: 339 AALDGQNLDGRAIRVNVAEDRQ 360
+ ++L G+ + + AE ++
Sbjct: 210 SEGRMRDLGGKQVEIKKAEPKK 231
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+I+VG + WE + F ++G + ++ ++ D+ T RGFGFVT S + ++ +
Sbjct: 63 KIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE- 121
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSS 364
D N+DGR + V R+ SS
Sbjct: 122 -DEHNIDGRTVEVKRTVPREEMSS 144
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 26/117 (22%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCA 208
EE + P+ K+FVG LP + + L F +GN
Sbjct: 140 EEMSSKDGPKTRKIFVGGLPSTLTEDDLRDHFSS--------------YGN--------- 176
Query: 209 VFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
V Q++ + T RSRGFGFVT + + E+ + D+ G+ + + KA P+
Sbjct: 177 ---VVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 230
>gi|326487243|dbj|BAJ89606.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506666|dbj|BAJ91374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 33/202 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
K+FVG + ++ E + F K G + + ++
Sbjct: 62 GKIFVGGVAWETTEESFSKHFGKYGAITDS--------------------------VIMK 95
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEP 278
++ T RGFGFVT S +K +E H +IDGR + V + PR + P+
Sbjct: 96 DKHTKMPRGFGFVTFSDPSVIDKVLEDEH--NIDGRTVEVKRTVPREEMSSKDGPKTR-- 151
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+I+VG LP + L FS +G VV +++ D TGRSRGFGFVT SE + I
Sbjct: 152 --KIFVGGLPSTLTEDDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVI 209
Query: 339 AALDGQNLDGRAIRVNVAEDRQ 360
+ ++L G+ + + AE ++
Sbjct: 210 SEGRMRDLGGKQVEIKKAEPKK 231
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+I+VG + WE + F ++G + ++ ++ D+ T RGFGFVT S + ++ +
Sbjct: 63 KIFVGGVAWETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLE- 121
Query: 341 LDGQNLDGRAIRVNVAEDRQRRSS 364
D N+DGR + V R+ SS
Sbjct: 122 -DEHNIDGRTVEVKRTVPREEMSS 144
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 26/117 (22%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCA 208
EE + P+ K+FVG LP + + L F +GN
Sbjct: 140 EEMSSKDGPKTRKIFVGGLPSTLTEDDLRDHFSS--------------YGN--------- 176
Query: 209 VFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
V Q++ + T RSRGFGFVT + + E+ + D+ G+ + + KA P+
Sbjct: 177 ---VVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 230
>gi|238007140|gb|ACR34605.1| unknown [Zea mays]
gi|413926095|gb|AFW66027.1| hypothetical protein ZEAMMB73_185087 [Zea mays]
Length = 366
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 33/205 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
K+FVG + ++ E + FEK G + + ++
Sbjct: 37 GKIFVGGVAWETTEESFSKHFEKYGAITDS--------------------------VIMK 70
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEP 278
++ T RGFGFVT S +K +E H IDGR + V + PR + P+
Sbjct: 71 DKHTKMPRGFGFVTFSDPSVIDKVLEDDHV--IDGRTVEVKRTVPREEMITKDGPKTR-- 126
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+I++G LP + L+ FS +G VV +++ D TGRSRGFGF+T SE + I
Sbjct: 127 --KIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVI 184
Query: 339 AALDGQNLDGRAIRVNVAEDRQRRS 363
+ ++L G+ + + AE ++ S
Sbjct: 185 SEGRMRDLGGKQVEIKKAEPKKHGS 209
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 28/110 (25%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFL-FGNQGFHMWVCAVFYVSLL 215
P+ K+F+G LP + + E+K HF +GN V
Sbjct: 123 PKTRKIFIGGLPPSLTED---------------ELKDHFSSYGN------------VVEH 155
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
Q++ + T RSRGFGF+T + + E+ + D+ G+ + + KA P+
Sbjct: 156 QIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 205
>gi|91094515|ref|XP_971941.1| PREDICTED: similar to poly A binding protein [Tribolium castaneum]
gi|270000753|gb|EEZ97200.1| hypothetical protein TcasGA2_TC004389 [Tribolium castaneum]
Length = 565
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 12/150 (8%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP------- 278
S+GFGF+ E AEKAV + Y+++G L V +A + + + + +E
Sbjct: 232 SKGFGFIAFEEPESAEKAVTEMNNYELNGTNLYVGRAQKKSERIKELKKCYEQMKLERYN 291
Query: 279 ---GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
G +Y+ NL DN RL + FS+ G + +A+V+ E GRS+GFGFV S+ E +
Sbjct: 292 RIQGANVYIKNLDDTFDNDRLRKEFSQFGAITSAKVM--TEGGRSKGFGFVCFSTPEEAS 349
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
AI +DG+ + + I V +A+ + R ++
Sbjct: 350 KAITEMDGRMIGSKPIYVALAQRYEDRRAY 379
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 35/193 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
L+VG+L DV A+L+EK F Q + VC +
Sbjct: 14 LYVGDLHPDVTE---ALLYEK------------FSPAGQILSLRVCR-----------DS 47
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF- 280
T +S G+ +V S EAE+ ++ + + G+ + R +R P + + G
Sbjct: 48 RTKQSLGYAYVNFSQTIEAERVLDTMNFDLLKGKPI-------RIMWSQRDPSLRKSGIG 100
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++ NL +DN + FS G +++ +V D + G S+G+GFV S N AI
Sbjct: 101 NVFIKNLDKSIDNKAMYDTFSAFGNILSCKVAID-DDGVSKGYGFVHFESIEAANKAIEK 159
Query: 341 LDGQNLDGRAIRV 353
++G L+G+ + V
Sbjct: 160 VNGMLLNGKKVYV 172
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFRIYVG 285
S+G+GFV ++E A KA+E + ++G+ + V K PR + + + +YV
Sbjct: 139 SKGYGFVHFESIEAANKAIEKVNGMLLNGKKVYVGKFIPRAEREKEIGEKSKKYTNVYVK 198
Query: 286 NLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQN 345
N + +L +F +G + + VV G S+GFGF+ A+ ++
Sbjct: 199 NFGRNLTQEQLYDLFKNYGTITSC-VVMANPDGTSKGFGFIAFEEPESAEKAVTEMNNYE 257
Query: 346 LDGRAIRVNVAEDRQRR 362
L+G + V A+ + R
Sbjct: 258 LNGTNLYVGRAQKKSER 274
>gi|398802241|ref|ZP_10561457.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
gi|398100710|gb|EJL90943.1| RRM domain-containing RNA-binding protein [Polaromonas sp. CF318]
Length = 148
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + L+Q F + G V +A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLPYSVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR++ VN A + R
Sbjct: 62 NGMNGQPLGGRSVVVNEARPMEAR 85
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 26/112 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V E L F + G V A +V+
Sbjct: 4 KLYVGNLPYSVRDEDLQQSFGQFGAVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERA 272
R+T RS+GFGFV M + EA+ A+ + + GR + VN+A P +P R+
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSVVVNEARPMEARPPRS 89
>gi|389748929|gb|EIM90106.1| polyadenylate binding protein [Stereum hirsutum FP-91666 SS1]
Length = 682
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 38/211 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
L+V NL +V ++ LF + G V A VI
Sbjct: 237 LYVKNLDLEVTQDQFVELFSQFGAVTSA---------------------------VIQTD 269
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEP--- 278
E +S+GFGFV E+A KAV+ H D +G+ L V++A + + E + +E
Sbjct: 270 EEGKSKGFGFVNFENHEQAAKAVDTLHDTDFNGKKLFVSRAQKKAEREEELRKSYESAKM 329
Query: 279 -------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +Y+ NL +VD+ +L F G + + +V+ D + G S+GFGFV SS
Sbjct: 330 EKLSKYQGVNLYIKNLEDDVDDEKLRAEFEPFGTITSCKVMRD-DKGTSKGFGFVCFSSP 388
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRR 362
E A+A ++ + + + + V++A+ R+ R
Sbjct: 389 DEATKAVAEMNNKMIGSKPLYVSLAQRREVR 419
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 19/164 (11%)
Query: 212 VSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
V+ ++V + T RS G+ +V V + E+A+E + I GR A R +R
Sbjct: 70 VASIRVCRDAVTRRSLGYAYVNYLNVTDGERALEQLNYSLIKGR-------ACRIMWSQR 122
Query: 272 APRVFEPG-FRIYVGNLPWEVDNA----------RLEQVFSEHGKVVNARVVYDRETGRS 320
P + + G I++ NL +DN L F+ G V++ +V D E GRS
Sbjct: 123 DPALRKTGQGNIFIKNLDELIDNKVRTAQKTPPHALHDTFAAFGNVLSCKVATD-EQGRS 181
Query: 321 RGFGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
RG+G+V + AI A++G L+ + + V R+ R S
Sbjct: 182 RGYGYVHYETAEAAESAIKAVNGMLLNDKKVYVGYHISRKERQS 225
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVG L V A L ++F+ G V + RV D T RS G+ +V + T+ A+ L
Sbjct: 46 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNVTDGERALEQL 105
Query: 342 DGQNLDGRAIRV 353
+ + GRA R+
Sbjct: 106 NYSLIKGRACRI 117
>gi|388580169|gb|EIM20486.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 335
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 102/206 (49%), Gaps = 40/206 (19%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
K+F+G L +D D + L F K FGN V L ++ +
Sbjct: 45 KIFIGGLNWDTDEDSLRNYFSK--------------FGN------------VVQLNIMRD 78
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGF 280
T+RSRGFGF+T ++ + M + +DG+L+ + R +
Sbjct: 79 PNTNRSRGFGFLTFDNLQSVQDV--MIRDHWLDGKLIDPKRNMYRHENFKHK-------- 128
Query: 281 RIYVGNLPWEVDNARLEQVF-SEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+I+VG +P + ++ + F S G+V +A ++YD+ETGRSRGFGF+T +E + DA+
Sbjct: 129 KIFVGGIPLTMPVEQVVENFESVFGQVTDANLMYDKETGRSRGFGFLTFETEQQAEDAVK 188
Query: 340 ALDGQ-NLDGRAIRVNVAEDRQRRSS 364
+G+ +L+G+++ V + R RS
Sbjct: 189 --EGRFDLEGKSVEVKRVQTRNERSG 212
>gi|293336544|ref|NP_001168743.1| uncharacterized protein LOC100382538 [Zea mays]
gi|223972773|gb|ACN30574.1| unknown [Zea mays]
gi|413936749|gb|AFW71300.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
gi|413936750|gb|AFW71301.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
Length = 384
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 95/205 (46%), Gaps = 33/205 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
K+FVG + ++ E + FEK G + + ++
Sbjct: 55 GKIFVGGVAWETTEESFSKHFEKYGAITDS--------------------------VIMK 88
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRG-TQPERAPRVFEP 278
++ T RGFGFVT S +K +E H IDGR + V + PR + P+
Sbjct: 89 DKHTKMPRGFGFVTFSDPSVIDKVLEDEHV--IDGRTVEVKRTVPREEMNTKDGPKTR-- 144
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+I++G LP + L+ FS +GKV+ +++ D TGRSRGFGFVT SE + I
Sbjct: 145 --KIFIGGLPASLTEDELKDHFSLYGKVLEHQIMLDHSTGRSRGFGFVTFESEDSVERVI 202
Query: 339 AALDGQNLDGRAIRVNVAEDRQRRS 363
+ ++L G+ + + AE ++ S
Sbjct: 203 SEGRMRDLGGKQVEIKKAEPKKHGS 227
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 28/118 (23%)
Query: 149 EEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHF-LFGNQGFHMWVC 207
EE + P+ K+F+G LP A L E E+K HF L+G
Sbjct: 133 EEMNTKDGPKTRKIFIGGLP--------ASLTED-------ELKDHFSLYGK-------- 169
Query: 208 AVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
V Q++ + T RSRGFGFVT + + E+ + D+ G+ + + KA P+
Sbjct: 170 ----VLEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 223
>gi|160901477|ref|YP_001567059.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333917515|ref|YP_004491247.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|160367061|gb|ABX38674.1| RNP-1 like RNA-binding protein [Delftia acidovorans SPH-1]
gi|333747715|gb|AEF92892.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 124
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 57/85 (67%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ ++ LEQ FSE G V +A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLPYTFRDSDLEQAFSEFGAVNSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRRS 363
L GQN GR + VN A + R+
Sbjct: 62 QGLHGQNRGGRDLVVNEARPMEPRA 86
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 29/114 (25%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY L F + G V A +V+
Sbjct: 4 KLYVGNLPYTFRDSDLEQAFSEFGAVNSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR 274
R+T RS+GFGFV M + EA+ A++ H + GR L VN+A P +P RAPR
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAIQGLHGQNRGGRDLVVNEARP--MEP-RAPR 88
>gi|406965367|gb|EKD91001.1| Glycine-rich RNA-binding protein [uncultured bacterium]
Length = 87
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 60/80 (75%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+++VG+LPW VD++ L + FS++G+++ A V+ DR+TGRSRGFGFV +++ + + AI
Sbjct: 7 KLFVGSLPWGVDDSGLREAFSKYGEIIQATVLKDRQTGRSRGFGFVEFANDADGDKAIQE 66
Query: 341 LDGQNLDGRAIRVNVAEDRQ 360
++G ++DGR I VN A R+
Sbjct: 67 MNGADMDGRNIVVNEARPRE 86
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 51/105 (48%), Gaps = 26/105 (24%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KLFVG+LP+ VD L F K G + A V+ +
Sbjct: 7 KLFVGSLPWGVDDSGLREAFSKYGEIIQA--------------------------TVLKD 40
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
R+T RSRGFGFV + + +KA++ + D+DGR + VN+A PR
Sbjct: 41 RQTGRSRGFGFVEFANDADGDKAIQEMNGADMDGRNIVVNEARPR 85
>gi|239813338|ref|YP_002942248.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
gi|239799915|gb|ACS16982.1| RNP-1 like RNA-binding protein [Variovorax paradoxus S110]
Length = 137
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 58/84 (69%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNL + V + LEQ F E G +V+A+V+ +R+TGRS+GFGFV M ++ E A+
Sbjct: 2 GKKLYVGNLAYSVRDNDLEQAFGEFGSIVSAKVMMERDTGRSKGFGFVEMGTDAEALAAV 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
A++G +L GRA+ VN A + R
Sbjct: 62 EAMNGHSLQGRALTVNEARPMEAR 85
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 52/111 (46%), Gaps = 26/111 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNL Y V L F + G++ A +V+
Sbjct: 4 KLYVGNLAYSVRDNDLEQAFGEFGSIVSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
R+T RS+GFGFV M T EA AVE + + + GR LTVN+A P +P R
Sbjct: 38 RDTGRSKGFGFVEMGTDAEALAAVEAMNGHSLQGRALTVNEARPMEARPPR 88
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 39/213 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+++ N D+D EKL +F K FGN + ++V+ +
Sbjct: 193 VYIKNFGEDMDDEKLKEIFSK--------------FGN------------ATSVRVMTD- 225
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
E+ RGFGFV+ E+A+KAV+ + +++GR++ V +A + + R FE
Sbjct: 226 ESGGGRGFGFVSFENHEDAQKAVDEMNGKELNGRIMFVGRAQKKMERQMELKRRFEQMKQ 285
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL +D+ RL + FS G + +A+V+ E GRS+GFGFV SS
Sbjct: 286 DRTTRYQGVNLYVKNLDDGIDDERLRKEFSPFGSITSAKVMM--EGGRSKGFGFVCFSSP 343
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 344 EEATKAVTEMNGRIVATKPLYVALAQRKEERQA 376
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 41/207 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+F+ NL +D++ L F G + +V VC
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKV--------------VC-------------- 132
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
+ + SRG+GFV T + AE+A+E + ++ R + V G R R E G R
Sbjct: 133 DENGSRGYGFVHFETHDAAERAIEKMNGMLLNDRKVFV------GRFKSRKEREAELGAR 186
Query: 282 ------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
+Y+ N ++D+ +L+++FS+ G + RV+ D E+G RGFGFV+ + +
Sbjct: 187 AREFTNVYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTD-ESGGGRGFGFVSFENHEDAQ 245
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRR 362
A+ ++G+ L+GR + V A+ + R
Sbjct: 246 KAVDEMNGKELNGRIMFVGRAQKKMER 272
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 36/206 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L+VG+L DV AML+EK F G + ++V
Sbjct: 11 ASLYVGDLHQDVTE---AMLYEK--------------FSPAG---------AIVSIRVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS G+ +V +AE+A++ + I G+ + + + +R P + + G
Sbjct: 45 DMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGQPVRIMWS-------QRDPSLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
I++ NL +DN L FS G +++ +VV D E G SRG+GFV + AI
Sbjct: 98 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD-ENG-SRGYGFVHFETHDAAERAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRRSS 364
++G L+ R + V + R+ R +
Sbjct: 156 EKMNGMLLNDRKVFVGRFKSRKEREA 181
>gi|333977917|ref|YP_004515862.1| RNP-1 like RNA-binding protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821398|gb|AEG14061.1| RNP-1 like RNA-binding protein [Desulfotomaculum kuznetsovii DSM
6115]
Length = 85
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVGNLPW LE+ FS +G++++ARV+ DR+TGRSRGFGFV + ++ + + IAAL
Sbjct: 5 LYVGNLPWATRAEDLEEAFSRYGEIISARVITDRQTGRSRGFGFVEV-ADKDADAIIAAL 63
Query: 342 DGQNLDGRAIRVNVAEDRQRRS 363
+G +GR I VN A R+ R+
Sbjct: 64 NGTEFNGRVITVNEARPREERA 85
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 27/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
L+VGNLP+ +E L F + G + A +VI +R
Sbjct: 5 LYVGNLPWATRAEDLEEAFSRYGEIISA--------------------------RVITDR 38
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
+T RSRGFGFV ++ ++A+ + + + +GR++TVN+A PR
Sbjct: 39 QTGRSRGFGFVEVAD-KDADAIIAALNGTEFNGRVITVNEARPR 81
>gi|442771473|gb|AGC72159.1| RNA-binding protein [uncultured bacterium A1Q1_fos_560]
Length = 98
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 55/85 (64%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G +IYVG LP+ +L +F+ HG V +AR++ D+ TG+SRGFGFV MS ++E AI
Sbjct: 2 GSKIYVGGLPYSTTEQQLSDLFAVHGAVTSARIITDKFTGQSRGFGFVEMSGDSEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRRS 363
AL+G GR + VN A ++ RS
Sbjct: 62 NALNGTQFGGRTLTVNEARPQEPRS 86
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 26/106 (24%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+K++VG LPY ++L+ LF G V A ++I
Sbjct: 3 SKIYVGGLPYSTTEQQLSDLFAVHGAVTSA--------------------------RIIT 36
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
++ T +SRGFGFV MS EA+ A+ + GR LTVN+A P+
Sbjct: 37 DKFTGQSRGFGFVEMSGDSEAQAAINALNGTQFGGRTLTVNEARPQ 82
>gi|195626882|gb|ACG35271.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 203
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 280 FRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIA 339
+R +VG L W D+ L FS +G+V+ ++++ DRET RSRGFGFVT S+E + AI
Sbjct: 65 YRCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIE 124
Query: 340 ALDGQNLDGRAIRVNVAE 357
++G+ LDGR I VN A+
Sbjct: 125 GMNGKELDGRNITVNEAQ 142
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 52/116 (44%), Gaps = 26/116 (22%)
Query: 147 VFEEEEFVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWV 206
V E EE + + FVG L + D L F G E+ E K
Sbjct: 52 VGEREEMAASDVEYRCFVGGLAWATDDHSLNNAFSTYG--EVLESK-------------- 95
Query: 207 CAVFYVSLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+I +RET RSRGFGFVT ST + A+E + ++DGR +TVN+A
Sbjct: 96 ----------IILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEA 141
>gi|147769692|emb|CAN65531.1| hypothetical protein VITISV_039630 [Vitis vinifera]
Length = 555
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 83/157 (52%), Gaps = 13/157 (8%)
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPR-- 274
VI +SRGFGFV + +EA+KAVE + + + L V +A + + E
Sbjct: 237 VIMKDGNGKSRGFGFVNFESPDEAKKAVEALNGAMLGSKKLFVGRAQKKAERQELLKHEK 296
Query: 275 -------VFEPGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVT 327
E +YV NL VD+ +L++ FS G++ +A+V+ ++G S+GFGFV
Sbjct: 297 EMVNCNIGKEKASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMR-HDSGLSKGFGFVC 355
Query: 328 MSSETELNDAIAALDGQNLDGRAIRVNVA---EDRQR 361
S+ E A+ L+G L GR++ + +A EDRQR
Sbjct: 356 FSTSEEAQKALTTLNGTLLHGRSLYIAMAQRKEDRQR 392
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 33/204 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A LFV NL ++S L +F K FGN +L
Sbjct: 117 ANLFVKNLDPSINSASLQDIFCK--------------FGN--------------ILSCKV 148
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
E +S+ FGFV + + A A+ + +DG+ L V+K + + E + E
Sbjct: 149 AEENGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLFVSKFVKKCERKEASE---ETK 205
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
F +YV NL ++ + FSE GKV ++ D G+SRGFGFV S E A+
Sbjct: 206 FTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKD-GNGKSRGFGFVNFESPDEAKKAV 264
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
AL+G L + + V A+ + R
Sbjct: 265 EALNGAMLGSKKLFVGRAQKKAER 288
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YVG+L EV L VFS G +V+ R+ D +G+S + +V ++ + A+A L
Sbjct: 31 LYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFYPSDASKALACL 90
Query: 342 DGQNLDGRAIRV 353
+ L G+ +R+
Sbjct: 91 NHTKLMGKPMRI 102
>gi|91790716|ref|YP_551668.1| RNA recognition motif-containing protein [Polaromonas sp. JS666]
gi|91699941|gb|ABE46770.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
Length = 151
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%)
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
G ++YVGNLP+ V + L+Q F + G V +A+V+ +R+TGRS+GFGFV M S+ E AI
Sbjct: 2 GNKLYVGNLPYSVRDEDLQQSFGQFGSVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAI 61
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++GQ L GR++ VN A + R
Sbjct: 62 NGMNGQPLGGRSVVVNEARPMEAR 85
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 26/111 (23%)
Query: 161 KLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYN 220
KL+VGNLPY V E L F + G+V A +V+
Sbjct: 4 KLYVGNLPYSVRDEDLQQSFGQFGSVTSA--------------------------KVMME 37
Query: 221 RETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER 271
R+T RS+GFGFV M + EA+ A+ + + GR + VN+A P +P R
Sbjct: 38 RDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSVVVNEARPMEARPPR 88
>gi|13540314|gb|AAK29408.1|AF338225_1 embryonic poly(A) binding protein [Xenopus laevis]
Length = 629
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 83/154 (53%), Gaps = 12/154 (7%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
++ RSRGFGFV EEA+KAV + +++GR++ V +A R + R FE
Sbjct: 226 DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQ 285
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL +D+ RL + F +G + +A+V+ E G S+GFGFV SS
Sbjct: 286 ERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVM--TEGGHSKGFGFVCFSSP 343
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSSF 365
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 344 EEATKAVTEMNGRIVSTKPLYVALAQRKEERKAI 377
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 79/140 (56%), Gaps = 3/140 (2%)
Query: 226 SRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNK-AAPRGTQPERAPRVFEPGFRIYV 284
SRG+GFV T E A +A++ + ++ R + V + R + E +V E +Y+
Sbjct: 137 SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVME-FTNVYI 195
Query: 285 GNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQ 344
N ++D+ RL ++FS G ++ +V+ D ++GRSRGFGFV + E A++ ++G+
Sbjct: 196 KNFGEDMDDKRLREIFSAFGNTLSVKVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGK 254
Query: 345 NLDGRAIRVNVAEDRQRRSS 364
++GR I V A+ R R S
Sbjct: 255 EVNGRMIYVGRAQKRIERQS 274
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 36/204 (17%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
A L++G+L DV AML+EK F G M + +V
Sbjct: 11 ASLYIGDLHPDVTE---AMLYEK--------------FSPAGPIMSI---------RVCR 44
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPG 279
+ T RS + ++ +AE+A++ + I GR + + + +R P + + G
Sbjct: 45 DIATRRSLSYAYINFQQPADAERALDTMNFEVIKGRPIRIMWS-------QRDPGLRKSG 97
Query: 280 F-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+++ NL +DN L FS G +++ +VV D E G SRG+GFV + N AI
Sbjct: 98 VGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCD-EHG-SRGYGFVHFETHEAANRAI 155
Query: 339 AALDGQNLDGRAIRVNVAEDRQRR 362
++G L+ R + V + R+ R
Sbjct: 156 QTMNGMLLNDRKVFVGHFKSRRER 179
>gi|410904819|ref|XP_003965889.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 636
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 39/213 (18%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+++ N D+D EKL LF K G +L +
Sbjct: 193 VYIKNFGEDMDDEKLKELFSKYGP---------------------------ALSIRVMTD 225
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFE---- 277
+ +S+GFGFV+ E+A+KAV+ + +++GR + V +A +G + R FE
Sbjct: 226 DGGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQ 285
Query: 278 ------PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSE 331
G +YV NL +D+ RL + FS G + +A+V+ E GRS+GFGFV SS
Sbjct: 286 DRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMM--EGGRSKGFGFVCFSSP 343
Query: 332 TELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 344 EEATKAVTEMNGRIVATKPLYVALAQRKEERQA 376
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 41/209 (19%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+F+ NL +D++ L F G + +V VC
Sbjct: 101 IFIKNLDKSIDNKALYDTFSAFGNILSCKV--------------VC-------------- 132
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
+ + S+G+GFV T E AE+A+E + ++ R + V G R R E G R
Sbjct: 133 DENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFV------GRFKSRKEREAELGAR 186
Query: 282 ------IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
+Y+ N ++D+ +L+++FS++G ++ RV+ D + G+S+GFGFV+ +
Sbjct: 187 AREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTD-DGGKSKGFGFVSFERHEDAQ 245
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
A+ ++G+ L+GR + V A+ + R +
Sbjct: 246 KAVDDMNGKELNGRQVYVGRAQKKGERQN 274
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P +YVG+L +V A L + FS G +++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPA---DA 65
Query: 338 IAALDGQNLD---GRAIRV 353
ALD N D GR +R+
Sbjct: 66 ERALDTMNFDVIKGRPLRI 84
>gi|15221187|ref|NP_177563.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
gi|12324900|gb|AAG52402.1|AC020579_4 putative RNA-binding protein; 37609-36098 [Arabidopsis thaliana]
gi|25083154|gb|AAN72048.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|30023780|gb|AAP13423.1| At1g74230 [Arabidopsis thaliana]
gi|332197447|gb|AEE35568.1| glycine-rich RNA-binding protein 5 [Arabidopsis thaliana]
Length = 289
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Query: 281 RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAA 340
+I+VG + + D L + FS++G+VV+A+++ DRETGRSRGF FVT +S E ++A+
Sbjct: 35 KIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAM-Q 93
Query: 341 LDGQNLDGRAIRVNVA 356
LDGQ+L GR IRVN A
Sbjct: 94 LDGQDLHGRRIRVNYA 109
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 27/103 (26%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
+K+FVG + Y D L F K G E+ + K +I
Sbjct: 34 SKIFVGGISYSTDEFGLREAFSKYG--EVVDAK------------------------IIV 67
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKA 262
+RET RSRGF FVT ++ EEA A+++ D+ GR + VN A
Sbjct: 68 DRETGRSRGFAFVTFTSTEEASNAMQL-DGQDLHGRRIRVNYA 109
>gi|357440095|ref|XP_003590325.1| 33 kDa ribonucleoprotein [Medicago truncatula]
gi|355479373|gb|AES60576.1| 33 kDa ribonucleoprotein [Medicago truncatula]
Length = 156
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 80/137 (58%), Gaps = 5/137 (3%)
Query: 234 MSTVEEAEKAVEMFHRYDIDGRLLTVN----KAAPRGTQPERAPRVF-EPGFRIYVGNLP 288
M VE+AE+A+ MF + GR + VN + Q R + + +IY GNL
Sbjct: 1 MGNVEDAEEAIRMFDGTTVGGRAIKVNFPEVPIVGKRVQMGSTYRGYVDSPHKIYAGNLG 60
Query: 289 WEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAALDGQNLDG 348
W++ + L + F++ +++A+VVY+R G+SRG+GFV+ + ++ A++A++G + G
Sbjct: 61 WDMTSQYLRKAFAKQPGLLSAKVVYERNNGKSRGYGFVSFETAEDVEVALSAMNGVEVQG 120
Query: 349 RAIRVNVAEDRQRRSSF 365
R +R+ +A D ++ SS
Sbjct: 121 RPLRLKLAVDNRKPSSL 137
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 28/111 (25%)
Query: 153 FVEPPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYV 212
+V+ P K++ GNL +D+ S+ L F K + A
Sbjct: 47 YVDSPH--KIYAGNLGWDMTSQYLRKAFAKQPGLLSA----------------------- 81
Query: 213 SLLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAA 263
+V+Y R +SRG+GFV+ T E+ E A+ + ++ GR L + A
Sbjct: 82 ---KVVYERNNGKSRGYGFVSFETAEDVEVALSAMNGVEVQGRPLRLKLAV 129
>gi|91095037|ref|XP_975975.1| PREDICTED: similar to poly A binding protein isoform 4 [Tribolium
castaneum]
gi|270014772|gb|EFA11220.1| hypothetical protein TcasGA2_TC005185 [Tribolium castaneum]
Length = 607
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 44/222 (19%)
Query: 158 EDAKLF----VGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVS 213
E AKLF V N D+ E+L +FEK G + +
Sbjct: 186 EKAKLFTNVYVKNFGEDLTEEQLRTMFEKYGKITSYK----------------------- 222
Query: 214 LLQVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDI-DGRLLTVNKAAPRGTQPERA 272
I +++ +S+GFGFV + E AE AVE + +I DG+ L V +A + + +
Sbjct: 223 ----IMSKDDGKSKGFGFVAFESPEAAETAVEALNGKEIIDGKPLYVGRAQKKAERQQEL 278
Query: 273 PRVFEP----------GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRG 322
R FE G +YV NL +D+ RL + FS G + +A+V+ E RS+G
Sbjct: 279 KRRFEALKMERLNRYQGVNLYVKNLDDTIDDERLRKEFSPFGTITSAKVMM--EDNRSKG 336
Query: 323 FGFVTMSSETELNDAIAALDGQNLDGRAIRVNVAEDRQRRSS 364
FGFV SS E A+ ++G+ + + + V +A+ ++ R +
Sbjct: 337 FGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEDRKA 378
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 41/207 (19%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEK---AGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQ 216
A L+VG+L D+ AMLFEK AG V + VC
Sbjct: 11 ASLYVGDLHTDITE---AMLFEKFSTAGPV---------------LSIRVCRDLI----- 47
Query: 217 VIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVF 276
T RS G+ +V +AE+A++ + I GR + + + +R P +
Sbjct: 48 ------TRRSLGYAYVNFQQPADAERALDTMNFDLIKGRPIRIMWS-------QRDPSLR 94
Query: 277 EPGF-RIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELN 335
+ G +++ NL +DN + FS G +++ +V D E G S+G+GFV +E N
Sbjct: 95 KSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQD-ENGTSKGYGFVHFETEEAAN 153
Query: 336 DAIAALDGQNLDGRAIRVNVAEDRQRR 362
+I ++G L+G+ + V R+ R
Sbjct: 154 KSIEKVNGMLLNGKKVYVGRFIPRKER 180
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPERAPRVFEPGFR 281
E S+G+GFV T E A K++E + ++G+ + V + PR + + +
Sbjct: 134 ENGTSKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTN 193
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
+YV N ++ +L +F ++GK+ + +++ ++ G+S+GFGFV S A+ AL
Sbjct: 194 VYVKNFGEDLTEEQLRTMFEKYGKITSYKIM-SKDDGKSKGFGFVAFESPEAAETAVEAL 252
Query: 342 DGQN-LDGRAIRVNVAEDRQRR 362
+G+ +DG+ + V A+ + R
Sbjct: 253 NGKEIIDGKPLYVGRAQKKAER 274
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P +YVG+L ++ A L + FS G V++ RV D T RS G+ +V DA
Sbjct: 9 PMASLYVGDLHTDITEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQPA---DA 65
Query: 338 IAALDGQNLD---GRAIRV 353
ALD N D GR IR+
Sbjct: 66 ERALDTMNFDLIKGRPIRI 84
>gi|239051430|ref|NP_001131946.2| uncharacterized protein LOC100193339 [Zea mays]
gi|194695014|gb|ACF81591.1| unknown [Zea mays]
gi|223947685|gb|ACN27926.1| unknown [Zea mays]
gi|238908636|gb|ACF80580.2| unknown [Zea mays]
gi|413926096|gb|AFW66028.1| heterogeneous nuclear ribonucleoprotein A3 isoform 1 [Zea mays]
gi|413926097|gb|AFW66029.1| heterogeneous nuclear ribonucleoprotein A3 isoform 2 [Zea mays]
gi|413926098|gb|AFW66030.1| heterogeneous nuclear ribonucleoprotein A3 isoform 3 [Zea mays]
Length = 384
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 33/205 (16%)
Query: 160 AKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIY 219
K+FVG + ++ E + FEK G + + ++
Sbjct: 55 GKIFVGGVAWETTEESFSKHFEKYGAITDS--------------------------VIMK 88
Query: 220 NRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPRGTQPER-APRVFEP 278
++ T RGFGFVT S +K +E H IDGR + V + PR + P+
Sbjct: 89 DKHTKMPRGFGFVTFSDPSVIDKVLEDDHV--IDGRTVEVKRTVPREEMITKDGPKTR-- 144
Query: 279 GFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAI 338
+I++G LP + L+ FS +G VV +++ D TGRSRGFGF+T SE + I
Sbjct: 145 --KIFIGGLPPSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVI 202
Query: 339 AALDGQNLDGRAIRVNVAEDRQRRS 363
+ ++L G+ + + AE ++ S
Sbjct: 203 SEGRMRDLGGKQVEIKKAEPKKHGS 227
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 28/110 (25%)
Query: 157 PEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFL-FGNQGFHMWVCAVFYVSLL 215
P+ K+F+G LP + + E+K HF +GN V
Sbjct: 141 PKTRKIFIGGLPPSLTED---------------ELKDHFSSYGN------------VVEH 173
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
Q++ + T RSRGFGF+T + + E+ + D+ G+ + + KA P+
Sbjct: 174 QIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGGKQVEIKKAEPK 223
>gi|170078237|ref|YP_001734875.1| RNA-binding protein [Synechococcus sp. PCC 7002]
gi|169885906|gb|ACA99619.1| RNA-binding protein [Synechococcus sp. PCC 7002]
Length = 95
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 56/81 (69%)
Query: 282 IYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDAIAAL 341
IY+GNL ++V + L++ F+E+GKV +V DRETGR RGF FV MSSE E N AI AL
Sbjct: 3 IYIGNLSYQVTDEDLKETFAEYGKVNRVQVPTDRETGRPRGFAFVEMSSEDEENAAIEAL 62
Query: 342 DGQNLDGRAIRVNVAEDRQRR 362
DG GR ++VN A+ R+ R
Sbjct: 63 DGAEWMGRDLKVNKAKPREDR 83
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 46/104 (44%), Gaps = 26/104 (25%)
Query: 162 LFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLLQVIYNR 221
+++GNL Y V E L F + G V + +QV +R
Sbjct: 3 IYIGNLSYQVTDEDLKETFAEYGKV--------------------------NRVQVPTDR 36
Query: 222 ETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
ET R RGF FV MS+ +E A+E + GR L VNKA PR
Sbjct: 37 ETGRPRGFAFVEMSSEDEENAAIEALDGAEWMGRDLKVNKAKPR 80
>gi|149924767|ref|ZP_01913111.1| probable nucleic acid-binding protein [Plesiocystis pacifica SIR-1]
gi|149814351|gb|EDM73949.1| probable nucleic acid-binding protein [Plesiocystis pacifica SIR-1]
Length = 155
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 58/82 (70%)
Query: 278 PGFRIYVGNLPWEVDNARLEQVFSEHGKVVNARVVYDRETGRSRGFGFVTMSSETELNDA 337
P R++VG L W+ ++ L ++F++ G VV+A +V DR+TG SRGFGFVTM++ + A
Sbjct: 74 PPCRLFVGGLSWDTESDSLRELFAKVGAVVDAMIVTDRDTGDSRGFGFVTMANRKDATKA 133
Query: 338 IAALDGQNLDGRAIRVNVAEDR 359
+ L G LDGR+IR+++A +R
Sbjct: 134 MKELGGTELDGRSIRIDLATER 155
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 28/110 (25%)
Query: 156 PPEDAKLFVGNLPYDVDSEKLAMLFEKAGTVEIAEVKFHFLFGNQGFHMWVCAVFYVSLL 215
PP +LFVG L +D +S+ L LF K G V A
Sbjct: 74 PP--CRLFVGGLSWDTESDSLRELFAKVGAVVDA-------------------------- 105
Query: 216 QVIYNRETDRSRGFGFVTMSTVEEAEKAVEMFHRYDIDGRLLTVNKAAPR 265
++ +R+T SRGFGFVTM+ ++A KA++ ++DGR + ++ A R
Sbjct: 106 MIVTDRDTGDSRGFGFVTMANRKDATKAMKELGGTELDGRSIRIDLATER 155
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.131 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,804,811,646
Number of Sequences: 23463169
Number of extensions: 261837899
Number of successful extensions: 1242229
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 18299
Number of HSP's successfully gapped in prelim test: 9659
Number of HSP's that attempted gapping in prelim test: 1044714
Number of HSP's gapped (non-prelim): 128502
length of query: 365
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 221
effective length of database: 8,980,499,031
effective search space: 1984690285851
effective search space used: 1984690285851
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)