Query 017849
Match_columns 365
No_of_seqs 305 out of 2623
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 05:55:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017849.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017849hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yp2_A Glucose-1-phosphate ade 100.0 5.3E-35 1.8E-39 286.4 19.5 257 2-333 20-298 (451)
2 3juk_A UDP-glucose pyrophospho 100.0 7.6E-33 2.6E-37 254.5 21.8 239 1-333 1-272 (281)
3 3brk_X Glucose-1-phosphate ade 100.0 2.7E-32 9.2E-37 264.9 22.8 247 2-333 12-287 (420)
4 4ecm_A Glucose-1-phosphate thy 100.0 7.3E-30 2.5E-34 233.2 24.4 234 2-332 24-260 (269)
5 3st8_A Bifunctional protein GL 100.0 7.5E-30 2.6E-34 252.9 23.0 187 3-227 13-205 (501)
6 1tzf_A Glucose-1-phosphate cyt 100.0 1.8E-29 6.3E-34 229.0 23.6 229 1-332 1-251 (259)
7 2e3d_A UTP--glucose-1-phosphat 100.0 2E-28 6.7E-33 227.4 24.6 235 3-332 9-282 (302)
8 2ux8_A Glucose-1-phosphate uri 100.0 5.1E-29 1.7E-33 230.8 18.1 240 1-332 13-280 (297)
9 2pa4_A UTP-glucose-1-phosphate 100.0 3E-28 1E-32 228.2 20.9 239 2-331 12-282 (323)
10 3pnn_A Conserved domain protei 100.0 1E-27 3.6E-32 222.5 22.5 255 1-333 4-293 (303)
11 1fxo_A Glucose-1-phosphate thy 100.0 4.5E-27 1.5E-31 217.1 23.1 185 1-223 1-186 (293)
12 1hm9_A GLMU, UDP-N-acetylgluco 100.0 3.4E-27 1.2E-31 232.0 22.2 229 4-332 13-251 (468)
13 1lvw_A Glucose-1-phosphate thy 100.0 4.6E-26 1.6E-30 210.3 26.1 184 2-223 3-187 (295)
14 2ggo_A 401AA long hypothetical 99.9 4.4E-27 1.5E-31 226.7 17.7 220 3-334 1-227 (401)
15 2qh5_A PMI, ALGA, mannose-6-ph 99.9 4.1E-27 1.4E-31 219.0 16.0 192 1-225 3-203 (308)
16 1mc3_A Glucose-1-phosphate thy 99.9 2.3E-26 7.8E-31 212.5 20.2 183 3-223 4-187 (296)
17 4evw_A Nucleoside-diphosphate- 99.9 2.6E-26 8.8E-31 207.9 18.6 168 5-218 2-180 (255)
18 4fce_A Bifunctional protein GL 99.9 7E-26 2.4E-30 222.0 19.3 180 1-226 7-189 (459)
19 2v0h_A Bifunctional protein GL 99.9 1.3E-25 4.3E-30 220.0 19.4 231 1-331 4-241 (456)
20 1jyk_A LICC protein, CTP:phosp 99.9 1.5E-24 5.2E-29 196.2 16.8 168 1-223 24-193 (254)
21 3oam_A 3-deoxy-manno-octuloson 99.9 9.6E-24 3.3E-28 190.7 19.9 191 1-226 1-198 (252)
22 2x65_A Mannose-1-phosphate gua 99.9 6E-24 2.1E-28 199.6 17.2 190 3-224 2-204 (336)
23 2cu2_A Putative mannose-1-phos 99.9 4.6E-24 1.6E-28 200.5 14.0 185 1-225 1-202 (337)
24 3k8d_A 3-deoxy-manno-octuloson 99.9 5E-21 1.7E-25 173.5 19.6 190 1-225 17-213 (264)
25 3tqd_A 3-deoxy-manno-octuloson 99.9 3.9E-21 1.4E-25 173.4 17.9 190 1-225 8-206 (256)
26 2y6p_A 3-deoxy-manno-octuloson 99.8 1.5E-19 5.1E-24 161.1 18.2 178 1-225 1-182 (234)
27 4fcu_A 3-deoxy-manno-octuloson 99.8 9.6E-19 3.3E-23 157.6 17.3 186 3-224 2-197 (253)
28 1vic_A 3-deoxy-manno-octuloson 99.8 4.9E-18 1.7E-22 154.0 21.1 188 1-224 1-200 (262)
29 1h7e_A 3-deoxy-manno-octuloson 99.8 4.9E-18 1.7E-22 152.3 20.6 181 1-224 1-187 (245)
30 2xme_A CTP-inositol-1-phosphat 99.8 2.3E-17 7.8E-22 146.8 17.8 168 2-223 18-186 (232)
31 3f1c_A Putative 2-C-methyl-D-e 99.7 2.8E-17 9.5E-22 147.7 15.7 129 1-136 2-140 (246)
32 2vsh_A TARI, 2-C-methyl-D-eryt 99.7 4.3E-17 1.5E-21 145.1 16.5 124 3-131 3-136 (236)
33 1ezi_A CMP-N-acetylneuraminic 99.7 3.2E-17 1.1E-21 145.5 10.7 123 1-139 3-135 (228)
34 2xwl_A 2-C-methyl-D-erythritol 99.7 2.9E-16 9.9E-21 138.6 16.0 124 1-137 1-128 (223)
35 2yc3_A 2-C-methyl-D-erythritol 99.7 2.6E-16 9E-21 139.4 12.4 120 2-131 4-128 (228)
36 2icy_A Probable UTP-glucose-1- 99.7 1.7E-15 5.7E-20 146.8 17.1 193 2-226 79-310 (469)
37 3rsb_A Adenosylcobinamide-phos 99.6 1.1E-16 3.8E-21 138.6 6.4 127 3-138 1-134 (196)
38 2wee_A MOBA-related protein; u 99.6 6.5E-16 2.2E-20 133.5 11.3 118 1-133 4-126 (197)
39 2waw_A MOBA relate protein; un 99.6 9.9E-16 3.4E-20 132.5 12.0 119 1-134 4-127 (199)
40 2i5k_A UTP--glucose-1-phosphat 99.6 2.5E-15 8.6E-20 146.4 16.1 193 2-226 92-323 (488)
41 2dpw_A Hypothetical protein TT 99.6 2E-15 7E-20 134.2 8.6 118 1-139 1-120 (232)
42 1vgw_A 4-diphosphocytidyl-2C-m 99.6 8E-15 2.7E-19 130.0 11.4 119 1-130 5-133 (231)
43 1qwj_A Cytidine monophospho-N- 99.6 1.5E-14 5E-19 128.4 12.9 122 1-138 2-132 (229)
44 1jv1_A Glcnac1P uridyltransfer 99.6 7.5E-14 2.6E-18 136.5 18.4 193 2-226 102-344 (505)
45 1e5k_A Molybdopterin-guanine d 99.5 3.5E-14 1.2E-18 123.4 11.6 115 1-134 5-123 (201)
46 3d5n_A Q97W15_sulso; NESG, SSR 99.5 1.2E-14 4.1E-19 126.0 8.4 114 1-133 1-118 (197)
47 1i52_A 4-diphosphocytidyl-2-C- 99.5 1.3E-14 4.4E-19 129.2 7.1 119 1-130 6-128 (236)
48 1vpa_A 2-C-methyl-D-erythritol 99.5 7.1E-14 2.4E-18 124.1 10.2 118 3-131 14-137 (234)
49 3q80_A 2-C-methyl-D-erythritol 99.5 2.8E-13 9.4E-18 120.2 13.6 113 3-128 8-127 (231)
50 2px7_A 2-C-methyl-D-erythritol 99.4 1.8E-13 6.3E-18 121.9 9.2 113 1-133 24-138 (236)
51 2e8b_A Probable molybdopterin- 99.4 1.6E-13 5.3E-18 119.3 7.2 103 2-123 14-120 (201)
52 1w55_A ISPD/ISPF bifunctional 99.4 3.1E-13 1.1E-17 127.7 9.6 115 1-131 2-119 (371)
53 3ngw_A Molybdopterin-guanine d 99.4 1.3E-12 4.5E-17 113.9 11.7 114 3-135 1-117 (208)
54 2oeg_A UTP-glucose-1-phosphate 99.3 6.9E-12 2.4E-16 122.1 13.9 193 2-226 75-323 (505)
55 2yqc_A UDP-N-acetylglucosamine 99.2 2.5E-10 8.5E-15 111.3 16.8 193 2-226 103-352 (486)
56 3oc9_A UDP-N-acetylglucosamine 99.2 7.1E-10 2.4E-14 104.7 18.9 192 2-224 35-275 (405)
57 2i5e_A Hypothetical protein MM 97.7 4E-05 1.4E-09 66.3 6.2 103 3-124 4-111 (211)
58 3r3i_A UTP--glucose-1-phosphat 97.5 0.003 1E-07 61.3 15.9 192 2-226 127-365 (528)
59 3gue_A UTP-glucose-1-phosphate 96.9 0.057 1.9E-06 51.9 17.8 132 3-140 77-249 (484)
60 2iu8_A LPXD, UDP-3-O-[3-hydrox 96.2 6.4E-05 2.2E-09 71.0 -7.7 74 106-221 13-89 (374)
61 3ogz_A UDP-sugar pyrophosphory 96.1 0.005 1.7E-07 60.9 5.2 131 3-139 115-300 (630)
62 3bcv_A Putative glycosyltransf 92.4 0.97 3.3E-05 38.5 10.5 105 28-135 10-118 (240)
63 1qg8_A Protein (spore coat pol 92.4 1.7 5.6E-05 37.4 12.1 99 28-129 6-116 (255)
64 3cgx_A Putative nucleotide-dip 90.5 0.85 2.9E-05 39.8 8.0 87 34-128 37-130 (242)
65 3r8y_A 2,3,4,5-tetrahydropyrid 90.1 0.091 3.1E-06 45.9 1.4 31 300-332 39-70 (240)
66 1xhb_A Polypeptide N-acetylgal 87.9 5.3 0.00018 38.1 12.3 103 28-133 34-146 (472)
67 2d7i_A Polypeptide N-acetylgal 83.9 6.2 0.00021 38.8 10.7 102 29-131 118-226 (570)
68 2ffu_A Ppgalnact-2, polypeptid 82.4 8.8 0.0003 36.9 11.0 101 28-133 71-178 (501)
69 2z86_A Chondroitin synthase; G 75.4 31 0.0011 33.9 12.7 103 28-133 98-206 (625)
70 2z86_A Chondroitin synthase; G 71.8 17 0.00058 35.8 9.8 99 28-129 380-482 (625)
71 3ckj_A Putative uncharacterize 68.4 45 0.0015 29.8 11.1 105 28-135 53-167 (329)
72 2pig_A Putative transferase; S 67.3 0.58 2E-05 43.0 -2.0 23 312-334 25-47 (334)
73 4hg6_A Cellulose synthase subu 58.0 69 0.0023 32.8 11.4 99 28-128 145-265 (802)
74 3nz2_A Hexapeptide-repeat cont 57.7 3.9 0.00013 34.0 1.7 25 340-364 139-163 (195)
75 3srt_A Maltose O-acetyltransfe 56.4 4.1 0.00014 33.7 1.6 25 340-364 139-163 (188)
76 3f1y_A Mannosyl-3-phosphoglyce 56.2 38 0.0013 31.4 8.4 104 28-138 99-218 (387)
77 4fix_A UDP-galactofuranosyl tr 55.9 45 0.0015 33.3 9.3 98 29-130 186-297 (657)
78 3hjj_A Maltose O-acetyltransfe 55.7 4.4 0.00015 33.5 1.6 25 340-364 141-165 (190)
79 1ocx_A Maltose O-acetyltransfe 55.3 4.6 0.00016 33.3 1.6 24 341-364 136-159 (182)
80 1krr_A Galactoside O-acetyltra 54.5 4.7 0.00016 33.9 1.6 24 341-364 139-162 (203)
81 4e79_A UDP-3-O-acylglucosamine 54.2 7.4 0.00025 35.8 3.1 20 312-331 78-97 (357)
82 3ftt_A Putative acetyltransfer 54.0 5.2 0.00018 33.4 1.8 25 340-364 137-161 (199)
83 2p2o_A Maltose transacetylase; 53.9 4.9 0.00017 33.2 1.6 24 341-364 138-161 (185)
84 3tv0_A Dynactin subunit 6; LEF 53.4 4.8 0.00016 33.3 1.5 24 341-364 110-133 (194)
85 4hur_A Virginiamycin A acetylt 52.5 5.3 0.00018 33.9 1.7 25 340-364 126-150 (220)
86 3eev_A Chloramphenicol acetylt 52.1 5.4 0.00018 33.6 1.6 25 340-364 118-142 (212)
87 1xat_A Xenobiotic acetyltransf 46.3 7.6 0.00026 32.9 1.6 25 340-364 117-141 (212)
88 3bfp_A Acetyltransferase; LEFT 45.7 22 0.00074 29.3 4.4 19 313-331 51-69 (194)
89 3nz2_A Hexapeptide-repeat cont 44.5 7.8 0.00027 32.2 1.4 25 340-364 133-157 (195)
90 3eh0_A UDP-3-O-[3-hydroxymyris 43.9 26 0.00088 31.8 5.0 18 314-331 74-91 (341)
91 3vbi_A ANTD, galactoside O-ace 43.2 9 0.00031 31.9 1.6 25 340-364 141-165 (205)
92 2p2o_A Maltose transacetylase; 42.6 8.9 0.0003 31.6 1.4 25 340-364 131-155 (185)
93 3hjj_A Maltose O-acetyltransfe 42.3 10 0.00035 31.2 1.8 25 340-364 135-159 (190)
94 3f1x_A Serine acetyltransferas 41.9 8.3 0.00029 34.8 1.3 27 339-365 257-283 (310)
95 3srt_A Maltose O-acetyltransfe 41.7 9.2 0.00031 31.5 1.4 25 340-364 133-157 (188)
96 1ocx_A Maltose O-acetyltransfe 41.2 11 0.00038 30.9 1.8 25 340-364 129-153 (182)
97 3eev_A Chloramphenicol acetylt 41.2 10 0.00035 31.8 1.7 28 338-365 110-137 (212)
98 4hur_A Virginiamycin A acetylt 40.7 11 0.00036 32.0 1.7 27 338-364 118-144 (220)
99 3mc4_A WW/RSP5/WWP domain:bact 40.6 8.7 0.0003 34.2 1.1 25 340-364 223-247 (287)
100 1krr_A Galactoside O-acetyltra 39.8 12 0.00041 31.4 1.8 23 342-364 134-156 (203)
101 3jqy_B NEUO, polysialic acid O 39.4 10 0.00035 32.8 1.4 25 340-364 170-194 (252)
102 3pmo_A UDP-3-O-[3-hydroxymyris 39.2 23 0.00078 32.7 3.8 20 312-331 94-113 (372)
103 3bfp_A Acetyltransferase; LEFT 38.8 14 0.0005 30.4 2.2 11 342-352 110-120 (194)
104 3ftt_A Putative acetyltransfer 38.5 10 0.00034 31.6 1.2 26 339-364 130-155 (199)
105 3gos_A 2,3,4,5-tetrahydropyrid 38.4 12 0.0004 33.1 1.7 21 344-364 188-208 (276)
106 4ea9_A Perosamine N-acetyltran 38.3 39 0.0013 28.2 5.0 18 314-331 76-93 (220)
107 1ssq_A SAT, serine acetyltrans 38.2 15 0.00052 32.2 2.3 33 97-129 13-47 (267)
108 3r8y_A 2,3,4,5-tetrahydropyrid 37.8 12 0.00042 32.0 1.6 17 347-363 135-151 (240)
109 3tv0_A Dynactin subunit 6; LEF 37.7 13 0.00046 30.5 1.8 15 347-361 128-142 (194)
110 3f1x_A Serine acetyltransferas 37.7 13 0.00045 33.4 1.9 14 348-361 213-226 (310)
111 2xvy_A Chelatase, putative; me 36.3 76 0.0026 27.4 6.7 25 33-57 63-87 (269)
112 3tk8_A 2,3,4,5-tetrahydropyrid 35.9 14 0.00046 33.4 1.7 21 344-364 229-249 (316)
113 3mqg_A Lipopolysaccharides bio 35.8 14 0.00048 30.2 1.7 25 340-364 109-133 (192)
114 3eg4_A 2,3,4,5-tetrahydropyrid 35.7 14 0.00047 33.2 1.7 11 92-102 53-63 (304)
115 3l7i_A Teichoic acid biosynthe 35.7 7.8 0.00027 39.3 0.0 97 29-127 8-109 (729)
116 1t3d_A SAT, serine acetyltrans 34.6 19 0.00065 32.0 2.4 31 99-129 35-67 (289)
117 3q1x_A Serine acetyltransferas 34.5 12 0.00042 33.7 1.1 23 342-364 232-254 (313)
118 1ssq_A SAT, serine acetyltrans 34.4 13 0.00043 32.8 1.1 23 342-364 198-220 (267)
119 3vbi_A ANTD, galactoside O-ace 34.2 14 0.00049 30.6 1.4 24 341-364 136-159 (205)
120 2wlg_A Polysialic acid O-acety 33.3 16 0.00056 30.5 1.7 23 342-364 146-168 (215)
121 1mr7_A Streptogramin A acetylt 32.8 17 0.00057 30.6 1.6 22 343-364 123-144 (209)
122 4e8l_A Virginiamycin A acetylt 32.7 17 0.00057 30.9 1.7 22 343-364 128-149 (219)
123 4eqy_A Acyl-[acyl-carrier-prot 32.5 14 0.00047 32.6 1.1 18 344-361 57-74 (283)
124 3ixc_A Hexapeptide transferase 32.1 18 0.0006 29.7 1.7 22 343-364 122-143 (191)
125 1qre_A Carbonic anhydrase; bet 32.0 18 0.00063 31.0 1.8 14 347-360 101-114 (247)
126 3eh0_A UDP-3-O-[3-hydroxymyris 31.9 17 0.00059 33.0 1.7 6 212-217 58-63 (341)
127 1t3d_A SAT, serine acetyltrans 31.9 15 0.00051 32.7 1.2 24 341-364 217-240 (289)
128 1xat_A Xenobiotic acetyltransf 31.5 18 0.00061 30.5 1.6 25 340-364 111-135 (212)
129 4eqy_A Acyl-[acyl-carrier-prot 31.4 18 0.00062 31.8 1.7 7 354-360 55-61 (283)
130 3jqy_B NEUO, polysialic acid O 30.7 17 0.00058 31.4 1.4 25 340-364 164-188 (252)
131 3fsy_A Tetrahydrodipicolinate 30.6 18 0.00062 32.7 1.5 19 345-363 167-185 (332)
132 3mqg_A Lipopolysaccharides bio 30.4 19 0.00064 29.4 1.5 12 351-362 69-80 (192)
133 3kwd_A Carbon dioxide concentr 30.3 17 0.0006 30.3 1.4 9 355-363 83-91 (213)
134 4ea9_A Perosamine N-acetyltran 30.1 18 0.0006 30.4 1.3 25 340-364 172-196 (220)
135 3r1w_A Carbonic anhydrase; bet 29.8 18 0.00062 29.4 1.3 21 344-364 115-135 (189)
136 1qre_A Carbonic anhydrase; bet 29.7 6.1 0.00021 34.2 -1.7 12 353-364 101-112 (247)
137 3pmo_A UDP-3-O-[3-hydroxymyris 29.5 18 0.00061 33.4 1.3 12 209-220 77-88 (372)
138 1xhd_A Putative acetyltransfer 29.1 22 0.00074 28.6 1.7 22 343-364 100-121 (173)
139 1v3w_A Ferripyochelin binding 29.0 19 0.00065 28.9 1.3 22 343-364 98-119 (173)
140 4e79_A UDP-3-O-acylglucosamine 28.9 22 0.00074 32.6 1.8 13 209-221 59-71 (357)
141 3r3r_A Ferripyochelin binding 28.8 19 0.00064 29.3 1.2 23 342-364 109-131 (187)
142 3gos_A 2,3,4,5-tetrahydropyrid 28.6 22 0.00074 31.3 1.7 10 92-101 31-40 (276)
143 3tk8_A 2,3,4,5-tetrahydropyrid 28.4 22 0.00074 32.1 1.7 11 92-102 71-81 (316)
144 3eg4_A 2,3,4,5-tetrahydropyrid 28.3 22 0.00075 31.8 1.7 19 345-363 214-232 (304)
145 1mr7_A Streptogramin A acetylt 28.3 23 0.00078 29.7 1.7 27 338-364 112-138 (209)
146 3r0s_A Acyl-[acyl-carrier-prot 27.4 24 0.00081 30.7 1.7 9 344-352 57-65 (266)
147 4e8l_A Virginiamycin A acetylt 26.4 26 0.00088 29.7 1.7 26 339-364 118-143 (219)
148 3r1w_A Carbonic anhydrase; bet 25.3 27 0.00093 28.2 1.6 9 348-356 125-133 (189)
149 3ixc_A Hexapeptide transferase 25.1 29 0.001 28.3 1.8 13 349-361 122-134 (191)
150 3fs8_A QDTC; acetyltransferase 24.9 27 0.00093 30.2 1.7 25 340-364 177-201 (273)
151 3toe_A MTH10B, DNA/RNA-binding 24.9 1.2E+02 0.0041 21.7 4.7 32 28-59 6-39 (91)
152 2nxv_A ATP synthase subunits r 24.2 3.1E+02 0.011 22.8 8.4 41 88-128 60-101 (249)
153 2rij_A Putative 2,3,4,5-tetrah 23.8 49 0.0017 30.7 3.2 22 310-331 169-192 (387)
154 3t57_A UDP-N-acetylglucosamine 23.4 27 0.00093 31.1 1.4 8 344-351 60-67 (305)
155 2ggo_A 401AA long hypothetical 22.6 25 0.00086 32.3 1.0 6 92-97 106-111 (401)
156 3fsy_A Tetrahydrodipicolinate 22.6 27 0.00093 31.5 1.2 14 351-364 249-262 (332)
157 2wlg_A Polysialic acid O-acety 22.3 36 0.0012 28.3 1.9 24 341-364 139-162 (215)
158 2bky_X DNA/RNA-binding protein 21.8 1.1E+02 0.0038 21.8 4.1 37 23-59 3-41 (89)
159 4fce_A Bifunctional protein GL 20.8 29 0.00098 32.6 1.0 25 81-105 104-128 (459)
No 1
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=100.00 E-value=5.3e-35 Score=286.42 Aligned_cols=257 Identities=19% Similarity=0.311 Sum_probs=185.5
Q ss_pred cceEEEEcCCCCCCCCCCCCCCCCceeceeCCc-chHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCc---
Q 017849 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANR-PVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRL--- 77 (365)
Q Consensus 2 ~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gk-plI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~--- 77 (365)
+|+|||||||.|+||+|| |..+||+|+|++|+ |||+|+|++|.++|+++|+|++++.. +.+.+++...+...+
T Consensus 20 ~~~avILAaG~gtRl~pl-T~~~pK~llpi~g~~pli~~~l~~l~~~g~~~i~vv~~~~~--~~i~~~~~~~~~~~~~~~ 96 (451)
T 1yp2_A 20 SVLGIILGGGAGTRLYPL-TKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNS--ASLNRHLSRAYASNMGGY 96 (451)
T ss_dssp HEEEEEC------CCTTT-TTTSCGGGCEETTTEETTHHHHHHHHHTTCCEEEEEESCCC--HHHHHHHHHHCC------
T ss_pred ceEEEEECCCCCCcccch-hcCCcceeeEECCcceeHHHHHHHHHHCCCCEEEEEeccCH--HHHHHHHhhhhhcccccc
Confidence 478999999999999999 99999999999999 99999999999999999999998763 467777764321011
Q ss_pred ----ceEEEEc--C-----CCCChHHHHHHHHHHcC---CCcEEEEeCCcccCCChHHHHHHHHhcCCeEEEEEeeeccC
Q 017849 78 ----HVEVATV--P-----EDVGTAGALRAIAHHLT---AKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMICSVPVS 143 (365)
Q Consensus 78 ----~v~i~~~--~-----~~~gt~~al~~~~~~i~---~~~~lv~~~D~i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~ 143 (365)
.+.++.. . ...|++++++.+++++. .++|++++||++++.++.++++.|++.++++|+++.+.+..
T Consensus 97 ~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~ 176 (451)
T 1yp2_A 97 KNEGFVEVLAAQQSPENPDWFQGTADAVRQYLWLFEEHTVLEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEK 176 (451)
T ss_dssp --CCEEEEEESCSSTTSCCCCCSHHHHHHHTHHHHTTSCCSEEEEECSCEECCCCHHHHHHHHHHTTCSEEEEEEEECHH
T ss_pred cccCcEEEecccccccccccccCcHHHHHHHHHHHHhcCCCeEEEecCcEEEcCCHHHHHHHHHHcCCcEEEEEEEcChh
Confidence 2444431 1 14899999999988875 46799999999999999999999999899999887664310
Q ss_pred CCccCCCCCCccCCCCCCcceEEEEcCCCcEEEEeecccccc--ccccccHHHHhhcCccee-ccCcccceeeeeCHHHH
Q 017849 144 GLSEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELE--KDTRIRKSILRAVGQMDI-RADLMDAHMYAFNRSVL 220 (365)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~e--k~~~i~~~~l~~~~~~~~-~~~l~~~giyi~s~~vl 220 (365)
++..|+++.+|+++++ ..+.++++.+ +..+++.+++.+++.... .++++++|+|+|++++|
T Consensus 177 ---------------~~~~~g~v~~d~~~~v-~~~~ekp~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l 240 (451)
T 1yp2_A 177 ---------------RATAFGLMKIDEEGRI-IEFAEKPQGEQLQAMKVDTTILGLDDKRAKEMPFIASMGIYVISKDVM 240 (451)
T ss_dssp ---------------HHTTSEEEEECTTSBE-EEEEESCCHHHHHHTCCCGGGGSCCHHHHHHCCEEEEEEEEEEEHHHH
T ss_pred ---------------hcccCCEEEECCCCCE-EEEEECCCchhhccccccccccccccccccCCcceEEeeEEEEcHHHH
Confidence 1457899999987764 6676544321 111233333332221111 34789999999999998
Q ss_pred HHHHhcC-ccccccccchhhHHHHhhhcccccccCCCCCccccccCCCcchhhhhhccCCCcccccccCCCCCCCCCCce
Q 017849 221 QEVLDQK-DKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRT 299 (365)
Q Consensus 221 ~~~~~~~-~~~~s~~~d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (365)
..++++. ....++.+++++.+++.+
T Consensus 241 ~~~l~~~~~~~~~~~~~~l~~~i~~g------------------------------------------------------ 266 (451)
T 1yp2_A 241 LNLLRDKFPGANDFGSEVIPGATSLG------------------------------------------------------ 266 (451)
T ss_dssp HHHHHTTCTTCCCTTTTHHHHHHHTT------------------------------------------------------
T ss_pred HHHHHhhcccccchHhhHHHHHHhcC------------------------------------------------------
Confidence 7666653 233456678888766432
Q ss_pred eEEEEEEecCCceEEEeCCHHHHHHHhHHHhhhh
Q 017849 300 HKCCVYIASNSKYCVRLNSIQAFMDINRDVIGEA 333 (365)
Q Consensus 300 ~~~~~~~~~~~~y~~ri~~~~~Y~~~n~~~l~~~ 333 (365)
.++++|.+ ++||.+++|+.+|+++|+++++++
T Consensus 267 ~~v~~~~~--~~~w~digt~~~l~~a~~~l~~~~ 298 (451)
T 1yp2_A 267 MRVQAYLY--DGYWEDIGTIEAFYNANLGITKKP 298 (451)
T ss_dssp CCEEEEEC--CSCCEECSSHHHHHHHHHGGGCSS
T ss_pred CceEEEEe--CCEEEECCCHHHHHHHHHHHhccc
Confidence 34678877 789999999999999999999765
No 2
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=100.00 E-value=7.6e-33 Score=254.54 Aligned_cols=239 Identities=13% Similarity=0.228 Sum_probs=183.1
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhh-c-----
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAY-V----- 74 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~-~----- 74 (365)
|.|+|||||||.|+||+|+ |..+||+|+||+|||||+|+|+++.++|+++|+|++++. .+.+.+++.+.+ .
T Consensus 1 M~~~avIlAaG~gtRl~pl-t~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~--~~~i~~~~~~~~~l~~~l~ 77 (281)
T 3juk_A 1 MIKKCLFPAAGYGTRFLPI-TKTIPKEMLPIVDKPLIQYAVEEAMEAGCEVMAIVTGRN--KRSLEDYFDTSYEIEHQIQ 77 (281)
T ss_dssp CCCEEEEECCSCCGGGTTG-GGTSCGGGCBSSSSBHHHHHHHHHHHHTCCEEEEEECTT--HHHHHHHTSCCC-------
T ss_pred CceEEEEECCcCCcccCcc-ccCCCcccceECCEEHHHHHHHHHHhCCCCEEEEEecCC--HHHHHHHHhcchhhhhhhh
Confidence 8899999999999999999 999999999999999999999999999999999999865 357888875421 0
Q ss_pred ---------------CCcceEEEEcCCCCChHHHHHHHHHHcCCCcEEEEeCCcccCCC-----hHHHHHHHHhcCCeEE
Q 017849 75 ---------------DRLHVEVATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLVSDVP-----PGAVTAAHRRHDAVVT 134 (365)
Q Consensus 75 ---------------~~~~v~i~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~i~~~~-----l~~~l~~h~~~~a~~t 134 (365)
....+.++.++...|++++++.+++++.+++|+|++||.+++.+ +..+++.|++.++ .+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~-~~ 156 (281)
T 3juk_A 78 GTNKENALKSIRNIIEKCCFSYVRQKQMKGLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQC-SI 156 (281)
T ss_dssp -CCHHHHHHHHHHHHHHCEEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHHCS-CE
T ss_pred cccchhhhhhhhccccCccEEEEecCCCCCcHHHHHHHHHHcCCCCEEEEeCCeeccCccchHHHHHHHHHHHHcCC-CE
Confidence 01234455667789999999999998877789999999988888 9999999988877 56
Q ss_pred EEEeeeccCCCccCCCCCCccCCCCCCcceEEEEcC--CC-cEEEEeeccccccccccccHHHHhhcCcceeccCcccce
Q 017849 135 AMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDP--TK-QFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAH 211 (365)
Q Consensus 135 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~--~~-~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~g 211 (365)
+++..++.. .+..||++.+|+ +| ..+..+.+++..+ ...++++++|
T Consensus 157 v~~~~~~~~---------------~~~~~g~v~~~~~~~g~~~v~~~~Ekp~~~----------------~~~~~~~~~G 205 (281)
T 3juk_A 157 VAIEEVALE---------------EVSKYGVIRGEWLEEGVYEIKDMVEKPNQE----------------DAPSNLAVIG 205 (281)
T ss_dssp EEEEECCTT---------------TGGGSEEEEEEEEETTEEEEEEEEESCCTT----------------TCSCSEEEEE
T ss_pred EEEEEechh---------------hcccCCEEEeccCCCCceEEeEEEECcCCC----------------CCCcceeEEE
Confidence 665554311 256899999886 55 1345666433211 1235789999
Q ss_pred eeeeCHHHHHHHHhcCc----cccccccchhhHHHHhhhcccccccCCCCCccccccCCCcchhhhhhccCCCccccccc
Q 017849 212 MYAFNRSVLQEVLDQKD----KFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYA 287 (365)
Q Consensus 212 iyi~s~~vl~~~~~~~~----~~~s~~~d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (365)
+|+|++++|..+ .+.. +..++ .|+++.++..+
T Consensus 206 iYi~~~~~l~~l-~~~~~~~~~e~~l-~d~i~~l~~~~------------------------------------------ 241 (281)
T 3juk_A 206 RYILTPDIFEIL-SETKPGKNNEIQI-TDALRTQAKRK------------------------------------------ 241 (281)
T ss_dssp EEEECTTHHHHH-HTCCCCGGGSCCH-HHHHHHHHHHS------------------------------------------
T ss_pred EEEECHHHHHHH-HhcCCCCCCceeH-HHHHHHHHhcC------------------------------------------
Confidence 999999999655 4321 11222 46666655331
Q ss_pred CCCCCCCCCCceeEEEEEEecCCceEEEeCCHHHHHHHhHHHhhhh
Q 017849 288 LGPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGEA 333 (365)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~y~~ri~~~~~Y~~~n~~~l~~~ 333 (365)
++++|.+ +|||..|+|+.+|+++|+++++..
T Consensus 242 -------------~v~~~~~--~g~~~dIgt~~d~~~a~~~l~~~~ 272 (281)
T 3juk_A 242 -------------RIIAYQF--KGKRYDCGSVEGYIEASNAYYKKR 272 (281)
T ss_dssp -------------CCEEEEC--CSEEEETTSHHHHHHHHHHHHHHH
T ss_pred -------------CEEEEEe--CCeEEcCCCHHHHHHHHHHHHhch
Confidence 3578888 689999999999999999999764
No 3
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=100.00 E-value=2.7e-32 Score=264.86 Aligned_cols=247 Identities=17% Similarity=0.241 Sum_probs=180.8
Q ss_pred cceEEEEcCCCCCCCCCCCCCCCCceeceeCCc-chHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhc-C----
Q 017849 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANR-PVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYV-D---- 75 (365)
Q Consensus 2 ~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gk-plI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~-~---- 75 (365)
+|+|||||||.|+||+|| |..+||+|+|++|+ |||+|+|++|.++|+++|+|++++.. +.+.+++.+.+. .
T Consensus 12 ~~~avILAaG~gtRl~pl-T~~~pK~llpi~gk~pli~~~l~~l~~~gi~~i~vv~~~~~--~~i~~~~~~~~~~~~~~~ 88 (420)
T 3brk_X 12 DAMAYVLAGGRGSRLKEL-TDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKA--HSLIRHLQRGWDFFRPER 88 (420)
T ss_dssp GEEEEEEECCCCGGGGGG-GSSSCGGGSEETTTEETHHHHHHHHHHTTCCEEEEEECTTC--HHHHHHHHHHSCCCCGGG
T ss_pred ceEEEEEcCCCCCccchh-hcCCcccccccCCCCcHHHHHHHHHHhCCCCeEEEEeCCCh--HHHHHHHhhhhccccccc
Confidence 478999999999999999 99999999999999 99999999999999999999998653 477888865221 1
Q ss_pred CcceEEEEcC----CC---CChHHHHHHHHHHcC---CCcEEEEeCCcccCCChHHHHHHHHhcCCeEEEEEeeeccCCC
Q 017849 76 RLHVEVATVP----ED---VGTAGALRAIAHHLT---AKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGL 145 (365)
Q Consensus 76 ~~~v~i~~~~----~~---~gt~~al~~~~~~i~---~~~~lv~~~D~i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~ 145 (365)
...+.++... +. .|++++++.+++++. .++|++++||.+++.++.++++.|++.++++|+++.+.+..
T Consensus 89 ~~~v~i~~~~~~~~~~~~~~Gt~~al~~a~~~l~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~tl~~~~~~~~-- 166 (420)
T 3brk_X 89 NESFDILPASQRVSETQWYEGTADAVYQNIDIIEPYAPEYMVILAGDHIYKMDYEYMLQQHVDSGADVTIGCLEVPRM-- 166 (420)
T ss_dssp TCEEEEECCC-------CCCCHHHHHHTTHHHHHHHCCSEEEEEESSCEECBCTHHHHHHHHHTTCSEEEEEEEEETT--
T ss_pred cCCEEEeCccccccCCccccCCHHHHHHHHHHHHhcCCCEEEEecccEEEchHHHHHHHHHHHcCCeEEEEEeecCcc--
Confidence 1124444321 23 899999999888774 26799999999889999999999999899999888765321
Q ss_pred ccCCCCCCccCCCCCCcceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHHHh
Q 017849 146 SEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLD 225 (365)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~~~ 225 (365)
.+..|+++.+|+++++ ..+.+++...... . ....+.++++|+|+|++++|..+++
T Consensus 167 -------------~~~~~g~v~~d~~g~v-~~~~ekp~~~~~~----------~-~~~~~~~~~~Giy~~~~~~l~~~l~ 221 (420)
T 3brk_X 167 -------------EATGFGVMHVNEKDEI-IDFIEKPADPPGI----------P-GNEGFALASMGIYVFHTKFLMEAVR 221 (420)
T ss_dssp -------------GGGGSEEEEECTTSBE-EEEEESCSSCCCB----------T-TBTTEEEEEEEEEEEEHHHHHHHHT
T ss_pred -------------ccCcccEEEECCCCcE-EEeEeCCCccccc----------c-ccccceEEeeeeEEEeHHHHHHHHH
Confidence 2457899999987764 5665433211100 0 0112578999999999999876665
Q ss_pred cCc----cccccccchhhHHHHhhhcccccccCCCCCccccccCCCcchhhhhhccCCCcccccccCCCCCCCCCCceeE
Q 017849 226 QKD----KFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHK 301 (365)
Q Consensus 226 ~~~----~~~s~~~d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (365)
+.. ...++..|+++.+++++ +
T Consensus 222 ~~~~~~~~~~~~~~d~l~~li~~g-------------------------------------------------------~ 246 (420)
T 3brk_X 222 RDAADPTSSRDFGKDIIPYIVEHG-------------------------------------------------------K 246 (420)
T ss_dssp SSCCC----------CTTHHHHHS-------------------------------------------------------C
T ss_pred HhcccCCccccchHHHHHHHhhhC-------------------------------------------------------c
Confidence 422 12244568888876552 3
Q ss_pred EEEEEec---------CCceEEEeCCHHHHHHHhHHHhhhh
Q 017849 302 CCVYIAS---------NSKYCVRLNSIQAFMDINRDVIGEA 333 (365)
Q Consensus 302 ~~~~~~~---------~~~y~~ri~~~~~Y~~~n~~~l~~~ 333 (365)
+++|.++ .+|||.+|+|+.+|.++|+++++++
T Consensus 247 v~~~~~~~~~~~~~~~~~~~~~dI~t~~d~~~a~~~ll~~~ 287 (420)
T 3brk_X 247 AVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVV 287 (420)
T ss_dssp EEEEEHHHHBCCCTTCSSCCEECCCSHHHHHHHHHHTTSSS
T ss_pred EEEEEeccccccccccCCCEEEECCCHHHHHHHHHHHhCCC
Confidence 4666662 2579999999999999999999765
No 4
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=99.97 E-value=7.3e-30 Score=233.20 Aligned_cols=234 Identities=16% Similarity=0.250 Sum_probs=177.7
Q ss_pred cceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceEE
Q 017849 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (365)
Q Consensus 2 ~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i 81 (365)
.|+|||||||.|+||+|+ |..+||+|+|++|+|||+|+|+++.++|+++|+|++++.+. +.+.+++.+...-...+.+
T Consensus 24 ~m~aiIlAaG~g~Rl~~l-t~~~pK~ll~i~g~pli~~~l~~l~~~g~~~iivv~~~~~~-~~~~~~~~~~~~~~~~i~~ 101 (269)
T 4ecm_A 24 AMKGIILAGGTGSRLYPI-TKVTNKHLLPVGRYPMIYHAVYKLKQCDITDIMIITGKEHM-GDVVSFLGSGQEFGVSFTY 101 (269)
T ss_dssp CEEEEEECCSCCGGGTTT-TSSSCGGGSEETTEEHHHHHHHHHHHTTCCEEEEEECTTTH-HHHHHHHTTSGGGTCEEEE
T ss_pred CcEEEEECCCCccccccc-cCCCCceecEECCEEHHHHHHHHHHHCCCCEEEEECChhhH-HHHHHHHhhccccCceEEE
Confidence 479999999999999999 99999999999999999999999999999999999986432 3567777531100123455
Q ss_pred EEcCCCCChHHHHHHHHHHcCCCcEEEEeCCcccCCChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCCccCCCCCC
Q 017849 82 ATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPG 161 (365)
Q Consensus 82 ~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (365)
+.++...|++++++.+++.+..++|++++||.++..++.++++.|++.++++++++.+.. .+.
T Consensus 102 ~~~~~~~G~~~al~~a~~~~~~~~~lv~~~D~~~~~~l~~l~~~~~~~~~~~~~~~~~~~-----------------~~~ 164 (269)
T 4ecm_A 102 RVQDKAGGIAQALGLCEDFVGNDRMVVILGDNIFSDDIRPYVEEFTNQKEGAKVLLQSVD-----------------DPE 164 (269)
T ss_dssp EECSSCCCHHHHHHTTHHHHTTSEEEEEETTEEESSCSHHHHHHHHTSSSSEEEEEEECS-----------------CGG
T ss_pred eeCCccCcHHHHHHHHHHhcCCCcEEEEeCCccCccCHHHHHHHHHhcCCCeEEEEEECC-----------------CCC
Confidence 556677999999999988887678999999998889999999999988899988876543 255
Q ss_pred cceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHHHhcCccc--ccc-ccchh
Q 017849 162 RYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKDKF--QSL-KQDVL 238 (365)
Q Consensus 162 ~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~~~~~~~~--~s~-~~d~l 238 (365)
.|+++..|+ ++ +..+.+ |+. ...+.++++|+|+|++++|..+ .+.... ..+ -.+++
T Consensus 165 ~~g~v~~d~-g~-v~~~~e-----kp~-------------~~~~~~~~~Giy~~~~~~l~~l-~~~~~~~~ge~~l~d~l 223 (269)
T 4ecm_A 165 RFGVANIQN-RK-IIEIEE-----KPK-------------EPKSSYAVTGIYLYDSKVFSYI-KELKPSARGELEITDIN 223 (269)
T ss_dssp GSEEEEEET-TE-EEEEEE-----SCS-------------SCSCSEEEEEEEEECTTHHHHH-TSCCBCTTSCBCHHHHH
T ss_pred CceEEEEcC-CE-EEEEEE-----CCC-------------CCCCcEEEEEEEEECHHHHHhh-hhcCCCCCCeeeHHHHH
Confidence 789998885 54 456653 321 1235789999999999998544 432110 111 13444
Q ss_pred hHHHHhhhcccccccCCCCCccccccCCCcchhhhhhccCCCcccccccCCCCCCCCCCceeEEEEEEecCCceEEEeCC
Q 017849 239 PYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYCVRLNS 318 (365)
Q Consensus 239 p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ri~~ 318 (365)
+.++.. -++++|.. ++||..|+|
T Consensus 224 ~~l~~~-------------------------------------------------------g~v~~~~~--~~~~~dIgt 246 (269)
T 4ecm_A 224 NWYLKR-------------------------------------------------------GVLTYNEM--SGWWTDAGT 246 (269)
T ss_dssp HHHHHT-------------------------------------------------------TCEEEEEC--CSCEEECSS
T ss_pred HHHHHc-------------------------------------------------------CCEEEEEe--CCEEEeCCC
Confidence 444322 13566776 789999999
Q ss_pred HHHHHHHhHHHhhh
Q 017849 319 IQAFMDINRDVIGE 332 (365)
Q Consensus 319 ~~~Y~~~n~~~l~~ 332 (365)
+..|.++++.+++.
T Consensus 247 ~~dl~~a~~~l~~~ 260 (269)
T 4ecm_A 247 HVSLQRANALARDI 260 (269)
T ss_dssp HHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998764
No 5
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=99.97 E-value=7.5e-30 Score=252.95 Aligned_cols=187 Identities=25% Similarity=0.300 Sum_probs=152.3
Q ss_pred ceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhc-CCcceEE
Q 017849 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYV-DRLHVEV 81 (365)
Q Consensus 3 ~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~-~~~~v~i 81 (365)
+.+||||||+||||+|+ | ||||+||+|||||+|+|++|.++|+++|+|++++. .+.+.+++.+... -...+.+
T Consensus 13 ~~vvILAaG~GtRm~~~-~---pK~l~pv~gkp~i~~~l~~~~~~g~~~i~vv~~~~--~~~i~~~~~~~~~~~~~~i~~ 86 (501)
T 3st8_A 13 TAVLVLAAGPGTRMRSD-T---PKVLHTLAGRSMLSHVLHAIAKLAPQRLIVVLGHD--HQRIAPLVGELADTLGRTIDV 86 (501)
T ss_dssp EEEEEEECSCCGGGCCS-S---CGGGCEETTEEHHHHHHHHHHHHCCSEEEEEECTT--HHHHHHHHHHHHHHHTSCCEE
T ss_pred ceEEEECCcCcccCCCC-C---CHHHeEECChhHHHHHHHHHHhCCCCEEEEEeCCC--HHHHHHHHHHHHHhcCCcEEE
Confidence 56799999999999998 5 99999999999999999999999999999999976 4688888865211 1246888
Q ss_pred EEcCCCCChHHHHHHHHHHcCC---CcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCCccC
Q 017849 82 ATVPEDVGTAGALRAIAHHLTA---KDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDK 156 (365)
Q Consensus 82 ~~~~~~~gt~~al~~~~~~i~~---~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~ 156 (365)
+.+++++|||+|++.+++++.+ ++++++.||. +....+..+++.|+..++++|+++.+.+
T Consensus 87 ~~q~~~lGTa~Av~~a~~~l~~~~~~~~lvl~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~--------------- 151 (501)
T 3st8_A 87 ALQDRPLGTGHAVLCGLSALPDDYAGNVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLD--------------- 151 (501)
T ss_dssp EECSSCCCHHHHHHHHHTTSCTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECS---------------
T ss_pred EEcCCCCCcHHHHHHHHHHhccccccceeeecCcceeecHHHHHHHHHHHhhccccceEeeeccC---------------
Confidence 8899999999999999998864 4689999994 4445689999999999999999987754
Q ss_pred CCCCCcceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHHHhcC
Q 017849 157 TKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQK 227 (365)
Q Consensus 157 ~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~~~~~ 227 (365)
+|..||.+..|+++++ ..+.++++.. +. +...+++++|+|+|++++|..++...
T Consensus 152 --dp~~yG~i~~~~~g~v-~~ivEk~~~~-----~~---------~~~i~~in~Giy~f~~~~l~~~l~~l 205 (501)
T 3st8_A 152 --DPFGYGRILRTQDHEV-MAIVEQTDAT-----PS---------QREIREVNAGVYAFDIAALRSALSRL 205 (501)
T ss_dssp --CCTTSCEEEECTTCCE-EEEECGGGCC-----HH---------HHHCCEEEEEEEEEEHHHHHHHHTTC
T ss_pred --CchhccccccccceeE-EeeccccCCC-----hh---------hccceeeeceeeeecchhHHHhhhhh
Confidence 3778999999998875 5666432211 11 23458899999999999999887653
No 6
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=99.97 E-value=1.8e-29 Score=228.97 Aligned_cols=229 Identities=18% Similarity=0.308 Sum_probs=166.6
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhc--CCcc
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYV--DRLH 78 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~--~~~~ 78 (365)
|+|.|||||||.|+||+|+ |..+||+|+|++|||||+|+++++.++|+++|+|++++.. +.+.+++..... ..+.
T Consensus 1 m~~~avIlAaG~gtRl~~l-t~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~--~~i~~~~~~~~~~~~~~~ 77 (259)
T 1tzf_A 1 MASKAVILAGGLGTRLSEE-TIVKPKPMVEIGGKPILWHIMKMYSVHGIKDFIICCGYKG--YVIKEYFANYFLHMSDVT 77 (259)
T ss_dssp CCCEEEEEECSCC---------CCCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTH--HHHHHHHHTHHHHHSCEE
T ss_pred CCcEEEEECCCCcccCCCc-cCCCCccccEECCEEHHHHHHHHHHHCCCCEEEEEcccCH--HHHHHHHhhccccccccc
Confidence 8999999999999999999 9999999999999999999999999999999999998653 477888764310 0111
Q ss_pred -------------------eEEEEcCCCCChHHHHHHHHHHcC-CCcEEEEeCCcccCCChHHHHHHHHhcCCeEEEEEe
Q 017849 79 -------------------VEVATVPEDVGTAGALRAIAHHLT-AKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMIC 138 (365)
Q Consensus 79 -------------------v~i~~~~~~~gt~~al~~~~~~i~-~~~~lv~~~D~i~~~~l~~~l~~h~~~~a~~t~l~~ 138 (365)
+.+..++...|++++++.+++++. .++|++++||.+++.++.++++.|++.++++|+...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~gt~~al~~a~~~~~~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~t~~~~ 157 (259)
T 1tzf_A 78 FHMAENRMEVHHKRVEPWNVTLVDTGDSSMTGGRLKRVAEYVKDDEAFLFTYGDGVADLDIKATIDFHKAHGKKATLTAT 157 (259)
T ss_dssp EEGGGTEEEETTCCCCCCEEEEEECCSSCCHHHHHHHTGGGTTTSSCEEEEETTEEECCCHHHHHHHHHHHCCSEEEEEE
T ss_pred ccccccceeeeeccccccceeeeecccccCcHHHHHHHHHhcCCCCcEEEEECCEecccCHHHHHHHHHHhCCeEEEEEe
Confidence 112223346899999999988873 567999999999999999999999888888776532
Q ss_pred eeccCCCccCCCCCCccCCCCCCcceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHH
Q 017849 139 SVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRS 218 (365)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~ 218 (365)
. .+..|+++.+| +++ +..+.+ |+. ....++++|+|+|+++
T Consensus 158 ~-------------------~~~~~g~v~~~-~g~-v~~~~e-----kp~--------------~~~~~~~~Giy~~~~~ 197 (259)
T 1tzf_A 158 F-------------------PPGRFGALDIQ-AGQ-VRSFQE-----KPK--------------GDGAMINGGFFVLNPS 197 (259)
T ss_dssp C-------------------CCCCSEEEEEE-TTE-EEEEEE-----SCS--------------CCSCCEECCCEEECGG
T ss_pred c-------------------CCCCccEEEEc-CCE-EEEEEe-----cCC--------------CCCceEEEEEEEeCHH
Confidence 1 14568888888 564 456653 321 1236889999999999
Q ss_pred HHHHHHhcCccccccccchhhHHHHhhhcccccccCCCCCccccccCCCcchhhhhhccCCCcccccccCCCCCCCCCCc
Q 017849 219 VLQEVLDQKDKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRR 298 (365)
Q Consensus 219 vl~~~~~~~~~~~s~~~d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (365)
+|..+ ++. ..++..++++.+++++
T Consensus 198 ~l~~l-~~~--~~~~~~~~i~~~~~~~----------------------------------------------------- 221 (259)
T 1tzf_A 198 VIDLI-DND--ATTWEQEPLMTLAQQG----------------------------------------------------- 221 (259)
T ss_dssp GGGGC-CST--TCCTTTHHHHHHHHTT-----------------------------------------------------
T ss_pred HHHhh-ccc--ccccHHHHHHHHHHcC-----------------------------------------------------
Confidence 88533 321 1234456676654321
Q ss_pred eeEEEEEEecCCceEEEeCCHHHHHHHhHHHhhh
Q 017849 299 THKCCVYIASNSKYCVRLNSIQAFMDINRDVIGE 332 (365)
Q Consensus 299 ~~~~~~~~~~~~~y~~ri~~~~~Y~~~n~~~l~~ 332 (365)
++++|.+ ++||..|+|+.+|.++++.+.+.
T Consensus 222 --~v~~~~~--~~~~~dI~t~~d~~~a~~~~~~~ 251 (259)
T 1tzf_A 222 --ELMAFEH--PGFWQPMDTLRDKVYLEGLWEKG 251 (259)
T ss_dssp --CEEEEEE--CSCEEECCSHHHHHHHHHHHHTT
T ss_pred --CEEEEEe--CcEEEeCCCHHHHHHHHHHHhcC
Confidence 3577877 67999999999999999998753
No 7
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=99.96 E-value=2e-28 Score=227.41 Aligned_cols=235 Identities=12% Similarity=0.224 Sum_probs=171.7
Q ss_pred ceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhh---------
Q 017849 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAY--------- 73 (365)
Q Consensus 3 ~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~--------- 73 (365)
|+|||||||.|+||+|+ |..+||+|+||+|+|||+|+++++.++|+++|+|++++. .+.+.+|+...+
T Consensus 9 ~~avIlAaG~gtRl~pl-t~~~pK~ll~i~gkpli~~~l~~l~~~gi~~i~vv~~~~--~~~i~~~~~~~~~l~~~l~~~ 85 (302)
T 2e3d_A 9 KKAVIPVAGLGTRMLPA-TKAIPKEMLPLVDKPLIQYVVNECIAAGITEIVLVTHSS--KNSIENHFDTSFELEAMLEKR 85 (302)
T ss_dssp CEEEEECCSCCGGGTTT-TSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGG--GHHHHHHHSCCHHHHHHHC--
T ss_pred cEEEEECCcCcccCCcc-ccCCCceeeEECCeEHHHHHHHHHHHCCCCEEEEEeCCC--HHHHHHHHhcchhhhhhhhhc
Confidence 78999999999999999 999999999999999999999999999999999999865 357888875321
Q ss_pred -------------cCCcceEEEEcCCCCChHHHHHHHHHHcCCCcEEEEeCCcccC-----C---ChHHHHHHHHhcCCe
Q 017849 74 -------------VDRLHVEVATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLVSD-----V---PPGAVTAAHRRHDAV 132 (365)
Q Consensus 74 -------------~~~~~v~i~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~i~~-----~---~l~~~l~~h~~~~a~ 132 (365)
.....+.++.++...|++++++.+++++.+++|+|++||++++ . ++..+++.|++.++
T Consensus 86 ~~~~~l~~~~~~~~~~~~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~- 164 (302)
T 2e3d_A 86 VKRQLLDEVQSICPPHVTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH- 164 (302)
T ss_dssp --CHHHHHHHHTSCTTCEEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCC-
T ss_pred cchhhhhhhhhccccCcceEEeeCCccCCHHHHHHHHHHHcCCCcEEEEcCCccccCccccchHHHHHHHHHHHHhcCC-
Confidence 0112345566677899999999999888667899999998776 2 79999999988777
Q ss_pred EEEEEeeeccCCCccCCCCCCccCCCCCCcceEEEEc----CCCc--EEEEeeccccccccccccHHHHhhcCcceeccC
Q 017849 133 VTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMD----PTKQ--FLLHIATGAELEKDTRIRKSILRAVGQMDIRAD 206 (365)
Q Consensus 133 ~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d----~~~~--~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~ 206 (365)
+|+++.... .+..|+++..+ ++|. .+..+.+++..+ ...+.
T Consensus 165 ~~i~~~~~~-----------------~~~~yg~v~~~~~~~~~g~~~~v~~~~ekp~~~----------------~~~~~ 211 (302)
T 2e3d_A 165 SQIMVEPVA-----------------DVTAYGVVDCKGVELAPGESVPMVGVVEKPKAD----------------VAPSN 211 (302)
T ss_dssp EEEEEEECS-----------------CGGGSEEEECTTCCCCTTCEEEECEEEESCCTT----------------TCSCS
T ss_pred cEEEEEEcc-----------------CCCCccEEEecccccCCCCceeEEEEEECCCCC----------------ccccc
Confidence 666655431 24578988774 3441 344555322110 12347
Q ss_pred cccceeeeeCHHHHHHHHhcCc-cc-ccc-ccchhhHHHHhhhcccccccCCCCCccccccCCCcchhhhhhccCCCccc
Q 017849 207 LMDAHMYAFNRSVLQEVLDQKD-KF-QSL-KQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFH 283 (365)
Q Consensus 207 l~~~giyi~s~~vl~~~~~~~~-~~-~s~-~~d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (365)
++++|+|+|++++|..+ ++.. +. ..+ -.++++.+++.
T Consensus 212 ~~~~Giyi~~~~~l~~l-~~~~~~~~~~~~l~d~i~~l~~~--------------------------------------- 251 (302)
T 2e3d_A 212 LAIVGRYVLSADIWPLL-AKTPPGAGDEIQLTDAIDMLIEK--------------------------------------- 251 (302)
T ss_dssp EEEEEEEEECTTHHHHH-TCCCC----CCCHHHHHHHHHHH---------------------------------------
T ss_pred eEEEEEEEECHHHHHHH-HhhCCCCCCceehHHHHHHHHHh---------------------------------------
Confidence 88999999999988654 4321 10 011 12444443322
Q ss_pred ccccCCCCCCCCCCceeEEEEEEecCCceEEEeCCHHHHHHHhHHHhhh
Q 017849 284 ELYALGPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGE 332 (365)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ri~~~~~Y~~~n~~~l~~ 332 (365)
. ++++|.+ +|||..|+|+.+|.++|++++-.
T Consensus 252 ---------------~-~v~~~~~--~~~~~DIgt~~d~~~a~~~~~~~ 282 (302)
T 2e3d_A 252 ---------------E-TVEAYHM--KGKSHDCGNKLGYMQAFVEYGIR 282 (302)
T ss_dssp ---------------S-CEEEEEC--CSCEEECSSHHHHHHHHHHHHHH
T ss_pred ---------------C-CEEEEEe--CCeEEcCCCHHHHHHHHHHHHhc
Confidence 1 4577877 67999999999999999888653
No 8
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=99.96 E-value=5.1e-29 Score=230.84 Aligned_cols=240 Identities=16% Similarity=0.173 Sum_probs=161.1
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhh-------
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAY------- 73 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~------- 73 (365)
+.|+|||||||.|+||+|+ |..+||+|+|++|+|||+|+++++.++|+++|+|++++.. +.+.+++...+
T Consensus 13 ~~~~avIlAaG~gtRl~pl-t~~~pK~ll~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~--~~i~~~~~~~~~l~~~l~ 89 (297)
T 2ux8_A 13 PLRKAVFPVAGLGTRFLPA-TKAMPKEMLPVVDRPLIQYAVDEAVEAGIEQMIFVTGRGK--SALEDHFDIAYELEATMA 89 (297)
T ss_dssp CCCEEEEEECCCCGGGTTT-TSSSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTC--HHHHHHTSCCHHHHHHHH
T ss_pred CccEEEEECCCCccccCcc-ccCCCceeeeECCeEHHHHHHHHHHhCCCCEEEEEeCCCH--HHHHHHHhhhhhhhhhhh
Confidence 3578999999999999999 9999999999999999999999999999999999998653 47777765311
Q ss_pred -------------cCCcceEEEEcCCCCChHHHHHHHHHHcCCCcEEEEeCCcccC---CChHHHHHHHHhcCCeEEEEE
Q 017849 74 -------------VDRLHVEVATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLVSD---VPPGAVTAAHRRHDAVVTAMI 137 (365)
Q Consensus 74 -------------~~~~~v~i~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~i~~---~~l~~~l~~h~~~~a~~t~l~ 137 (365)
.....+.++.++...|++++++.+++++.+++|+|++||++++ .++..+++.|++.++ .++.+
T Consensus 90 ~~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~-~~i~~ 168 (297)
T 2ux8_A 90 ARGKSLDVLDGTRLKPGNIAYVRQQEPMGLGHAVWCARDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAYNKVGG-NLICA 168 (297)
T ss_dssp TTTCCGGGGTTSCCSTTSEEEEECCSCCCHHHHHHTTHHHHCSSCEEEECTTEEEESSSCHHHHHHHHHHHHCS-EEEEE
T ss_pred hccchhhhhhhcccCCCceEEEeCCCCCChHHHHHHHHHHcCCCcEEEEeCCeecCCChHHHHHHHHHHHhcCC-CEEEE
Confidence 0123466666677899999999998888667899999997766 679999999988776 45555
Q ss_pred eeeccCCCccCCCCCCccCCCCCCcceEEEEcC--CC-cEEEEeeccccccccccccHHHHhhcCcceeccCcccceeee
Q 017849 138 CSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDP--TK-QFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYA 214 (365)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~--~~-~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi 214 (365)
...+.. .+..|+++..++ ++ ..+..+.+ |+.. . ...+.++++|+|+
T Consensus 169 ~~~~~~---------------~~~~yg~v~~~~~~~~~~~v~~~~e-----kp~~----------~-~~~~~~~~~Giyi 217 (297)
T 2ux8_A 169 EEVPDD---------------QTHRYGIITPGTQDGVLTEVKGLVE-----KPAP----------G-TAPSNLSVIGRYI 217 (297)
T ss_dssp C--------------------------CCCCCCBCSSEEEC------------------------------CCCEEEEEE
T ss_pred EecCcc---------------cCCCCCeEEecccCCCceeEEEEEE-----CCCC----------C-CCCccEEEEEEEE
Confidence 443211 245677776653 33 13344543 2210 0 1235789999999
Q ss_pred eCHHHHHHHHhcCcccc-cc-ccchhhHHHHhhhcccccccCCCCCccccccCCCcchhhhhhccCCCcccccccCCCCC
Q 017849 215 FNRSVLQEVLDQKDKFQ-SL-KQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNG 292 (365)
Q Consensus 215 ~s~~vl~~~~~~~~~~~-s~-~~d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (365)
|++++|..+.+...+.. .+ -.++++.+++
T Consensus 218 ~~~~~l~~l~~~~~~~~~~~~l~d~i~~l~~------------------------------------------------- 248 (297)
T 2ux8_A 218 LQPEVMRILENQGKGAGGEIQLTDAMQRMIG------------------------------------------------- 248 (297)
T ss_dssp ECTHHHHHHHHTC--------CCTTGGGGTT-------------------------------------------------
T ss_pred ECHHHHHHHHhhCCCCCCeeEHHHHHHHHHh-------------------------------------------------
Confidence 99998865532111100 00 0122222110
Q ss_pred CCCCCceeEEEEEEecCCceEEEeCCHHHHHHHhHHHhhh
Q 017849 293 SAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGE 332 (365)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~y~~ri~~~~~Y~~~n~~~l~~ 332 (365)
. -++++|.+ +|+|..|+|+.+|.++|++++..
T Consensus 249 -----~-~~v~~~~~--~~~w~dIgt~~dl~~a~~~~~~~ 280 (297)
T 2ux8_A 249 -----D-QPFHGVTF--QGTRYDCGDKAGFIQANLAVALS 280 (297)
T ss_dssp -----T-SCEEEEEC--SSEEEETTSHHHHHHHHHHHHHH
T ss_pred -----c-CCEEEEEe--cceEEeCCCHHHHHHHHHHHHhc
Confidence 0 15688887 67999999999999999998754
No 9
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.96 E-value=3e-28 Score=228.23 Aligned_cols=239 Identities=17% Similarity=0.205 Sum_probs=172.6
Q ss_pred cceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhh--------
Q 017849 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAY-------- 73 (365)
Q Consensus 2 ~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~-------- 73 (365)
.|+|||||||.|+||+|+ |..+||+|+||+|+|||+|+++++..+|+++|+|++++.. +.+.+++...+
T Consensus 12 ~~~aVIlAaG~gtRl~pl-t~~~pK~ll~i~gkpli~~~l~~l~~~gi~~iivv~~~~~--~~i~~~~~~~~~~~~~l~~ 88 (323)
T 2pa4_A 12 VKTVVVPAAGLGTRFLPA-TKTVPKELLPVVDTPGIELIAAEAAELGATRLAIITAPNK--AGVLAHFERSSELEETLME 88 (323)
T ss_dssp CCEEEEECCCCCGGGTTG-GGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECTTC--HHHHHTTSCCHHHHHHHHH
T ss_pred ceEEEEECCCCccccCcc-ccCCCceeeeECCEEHHHHHHHHHHhCCCCEEEEEecCcH--HHHHHHHhccchhhhhhhc
Confidence 378999999999999999 9999999999999999999999999999999999998653 46776664210
Q ss_pred -------------cCCcceEEEEcCCCCChHHHHHHHHHHcCCCc--EEEEeCCcccC--CChHHHHHHHHhcCCeEEEE
Q 017849 74 -------------VDRLHVEVATVPEDVGTAGALRAIAHHLTAKD--VLVVSGDLVSD--VPPGAVTAAHRRHDAVVTAM 136 (365)
Q Consensus 74 -------------~~~~~v~i~~~~~~~gt~~al~~~~~~i~~~~--~lv~~~D~i~~--~~l~~~l~~h~~~~a~~t~l 136 (365)
.....+.++.++...|++++++.+++++.+++ |+|++||.+++ .++..+++.|++.++ .++.
T Consensus 89 ~~~~~~~~~~~~~~~g~~i~~~~~~~~~Gt~~al~~a~~~l~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~~-~~i~ 167 (323)
T 2pa4_A 89 RGKTDQVEIIRRAADLIKAVPVTQDKPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAEFGG-SVLC 167 (323)
T ss_dssp TTCHHHHHHTTHHHHHCEEEEEECSSCCCHHHHHHTTGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHHHTTCS-EEEE
T ss_pred cchhhhhhhhhccccCcceEEEeCCccCCcHHHHHHHHHHhcCCCCeEEEEeCCcccCchHHHHHHHHHHHhcCC-cEEE
Confidence 00123555666677999999999988886555 99999997765 679999999987776 4555
Q ss_pred EeeeccCCCccCCCCCCccCCCCCCcceEEEEc----CCC-cEEEEeeccccccccccccHHHHhhcCcceeccCcccce
Q 017849 137 ICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMD----PTK-QFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAH 211 (365)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d----~~~-~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~g 211 (365)
+...+.. .+..|+++.++ +++ ..+..+.+++..+ ...+.++++|
T Consensus 168 ~~~~~~~---------------~~~~yg~v~~d~~~~~~~~~~V~~~~Ekp~~~----------------~~~~~~~~~G 216 (323)
T 2pa4_A 168 AVEVSEA---------------DVSKYGIFEIEADTKDSDVKKVKGMVEKPAIE----------------DAPSRLAATG 216 (323)
T ss_dssp EEECCGG---------------GGGGSEEEEEEECCSSTTEEEEEEEEESCCTT----------------TCSCSEEEEE
T ss_pred EEEeccc---------------ccCCccEEEeCCcccCCCceeEEEEEECCCCc----------------cccccEEEEE
Confidence 5443210 24578988877 443 2456665432111 1234788999
Q ss_pred eeeeCHHHHHHHHhcCccc-cccc-cchhhHHHHhhhcccccccCCCCCccccccCCCcchhhhhhccCCCcccccccCC
Q 017849 212 MYAFNRSVLQEVLDQKDKF-QSLK-QDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALG 289 (365)
Q Consensus 212 iyi~s~~vl~~~~~~~~~~-~s~~-~d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (365)
+|+|++++|..+.....+. ..+. .++++.+++++
T Consensus 217 iY~~~~~~~~~l~~~~~~~~ge~~l~d~i~~l~~~g-------------------------------------------- 252 (323)
T 2pa4_A 217 RYLLDRKIFDALRRITPGAGGELQLTDAIDLLIDEG-------------------------------------------- 252 (323)
T ss_dssp EEEEETHHHHHHHHCCCCGGGCCCHHHHHHHHHHTT--------------------------------------------
T ss_pred EEEECHHHHHHHHhhCCCCCCeEeHHHHHHHHHHcC--------------------------------------------
Confidence 9999999886553322111 1111 35555543221
Q ss_pred CCCCCCCCceeEEEEEEecCCceEEEeCCHHHHHHHhHHHhh
Q 017849 290 PNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIG 331 (365)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~y~~ri~~~~~Y~~~n~~~l~ 331 (365)
.++++|.+ +|+|..|+|+.+|.+++++++.
T Consensus 253 ----------~~v~~~~~--~g~w~DIgt~~dl~~a~~~~~~ 282 (323)
T 2pa4_A 253 ----------HPVHIVIH--QGKRHDLGNPGGYIPACVDFGL 282 (323)
T ss_dssp ----------CCEEEEEC--CSEEEECSSHHHHHHHHHHHHH
T ss_pred ----------CCEEEEEe--CCeEEeCCCHHHHHHHHHHHhh
Confidence 34678887 6799999999999999998874
No 10
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=99.96 E-value=1e-27 Score=222.48 Aligned_cols=255 Identities=14% Similarity=0.139 Sum_probs=177.6
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceecee--CCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcc
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPV--ANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLH 78 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv--~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~ 78 (365)
|++.|||||||.|+||+| ||+|+|+ +|+|||+|+|+++.++|+++|+|++++.. .+.+.+++.+.+....+
T Consensus 4 m~~~~vIlAaG~g~R~~~------~K~l~~ig~~g~pli~~~l~~~~~~~~~~i~vv~~~~~-~~~~~~~~~~~~~~~~~ 76 (303)
T 3pnn_A 4 MKPTLFVLAAGMGSRYGS------LKQLDGIGPGGDTIMDYSVYDAIRAGFGRLVFVIRHSF-EKEFREKILTKYEGRIP 76 (303)
T ss_dssp CCCEEEEECTTCBCTTSS------BCCCCCCSTTSCCHHHHHHHHHHHHTCCEEEEEECGGG-HHHHHHHTHHHHTTTSC
T ss_pred CceEEEEECCCCcccCCC------CceEeEcCCCCeeHHHHHHHHHHHCCCCeEEEEcCchH-HHHHHHHHHHHhccCCc
Confidence 788999999999999965 5999999 59999999999999999999999998653 25788888754322345
Q ss_pred eEEEEcC---------------CCCChHHHHHHHHHHcCCCcEEEEeCCcccCCC-hHHHHHHHHh---cCCeEEEEEee
Q 017849 79 VEVATVP---------------EDVGTAGALRAIAHHLTAKDVLVVSGDLVSDVP-PGAVTAAHRR---HDAVVTAMICS 139 (365)
Q Consensus 79 v~i~~~~---------------~~~gt~~al~~~~~~i~~~~~lv~~~D~i~~~~-l~~~l~~h~~---~~a~~t~l~~~ 139 (365)
+.++.++ .+.||+++++.+++++ +++|+|++||.+++.+ ++.+++.|.+ .++++|+++..
T Consensus 77 i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~al~~a~~~i-~~~~lV~~gD~l~~~~~~~~l~~~~~~~~~~~~~~~v~~~~ 155 (303)
T 3pnn_A 77 VELVFQELDRLPEGFSCPEGREKPWGTNHAVLMGRDAI-REPFAVINADDFYGRNGFEVLARKLMTLEGKQGEYCMVGYR 155 (303)
T ss_dssp EEEEECCTTCCCTTCCCCTTCCSCCCHHHHHHTTTTTC-CSCEEEEESSCBCCHHHHHHHHHHHHTTTTCSSEEEEEEEE
T ss_pred EEEEecccccccccccccccccccCCcHHHHHHHHHhc-CCCEEEEECCeecCHHHHHHHHHHHHHhccccCceEEEEEE
Confidence 6677665 5799999999999988 6789999999988775 8999999975 57889988876
Q ss_pred eccCCC-ccCCCCCCccCCCCCCcceEEEEcCCCcEEEEeeccccccccc---cccHHHHhhcCc--ceeccCcccceee
Q 017849 140 VPVSGL-SEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDT---RIRKSILRAVGQ--MDIRADLMDAHMY 213 (365)
Q Consensus 140 ~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~---~i~~~~l~~~~~--~~~~~~l~~~giy 213 (365)
.. +| ..++ ...+|++.+|++|+ +..+.++++..... ..+. ..+. ....++++++|+|
T Consensus 156 ~~--~~~~~~g----------~~~~G~v~~d~~g~-v~~i~Ekp~~~~~~~~~~~~~----~~g~~~~~~~~~~i~~GiY 218 (303)
T 3pnn_A 156 VG--NTLSESG----------GVSRGVCQVDEKHL-LTGVVERTGIERTDGTISFRD----ETGKICTLAEDAPVSMNMW 218 (303)
T ss_dssp GG--GSCBTTB----------CEEEEEEEECTTSB-EEEEEEEEEEEEETTEEEEEC----TTSCEEEECTTCEEEEEEE
T ss_pred CC--CccCccC----------ceeeeeEeeCCCCc-EEEEEECCCCccccccccccc----cccccccCCCCCEEEEEEE
Confidence 53 22 1110 11347888998776 46776544321000 0000 0000 0024689999999
Q ss_pred eeCHHHHHHHHh--------cCccccccccchhhHHHHhhhcccccccCCCCCccccccCCCcchhhhhhccCCCccccc
Q 017849 214 AFNRSVLQEVLD--------QKDKFQSLKQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHEL 285 (365)
Q Consensus 214 i~s~~vl~~~~~--------~~~~~~s~~~d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (365)
+|++++|..+.. ... ..-.+..++.++..-...
T Consensus 219 ~f~~~~~~~l~~~~~~~l~~~~~--~~~~e~~l~d~i~~li~~------------------------------------- 259 (303)
T 3pnn_A 219 GFTPDYFDYSEELFINFLNAHGQ--EPKSEFFIPFVVNDLIRS------------------------------------- 259 (303)
T ss_dssp EECTHHHHHHHHHHHHHHHHHTT--CSSCCCCHHHHHHHHHHH-------------------------------------
T ss_pred EECHHHHHHHHHHHHHHHHhcCC--CcCCcEEhHHHHHHHHHc-------------------------------------
Confidence 999999976532 111 111122334333322110
Q ss_pred ccCCCCCCCCCCceeEEEEEEecCCceEEEeCCHHHHHHHhHHHhhhh
Q 017849 286 YALGPNGSAPVRRTHKCCVYIASNSKYCVRLNSIQAFMDINRDVIGEA 333 (365)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ri~~~~~Y~~~n~~~l~~~ 333 (365)
...++++|.+ +|||..|+|+..|.++++.+-+.+
T Consensus 260 ------------g~~~v~~~~~--~g~w~dIgt~~dl~~a~~~l~~~~ 293 (303)
T 3pnn_A 260 ------------GRASVEVLDT--TARWFGVTYSDDRPGVVAKLRELT 293 (303)
T ss_dssp ------------TSCEEEEEEC--SCCCBCCSSGGGHHHHHHHHHHHH
T ss_pred ------------CCCcEEEEEe--CCceECCCCHHHHHHHHHHHHHHH
Confidence 0126788888 789999999999999999886654
No 11
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=99.95 E-value=4.5e-27 Score=217.08 Aligned_cols=185 Identities=20% Similarity=0.338 Sum_probs=143.6
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceE
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~ 80 (365)
|+|.|||||||.|+||+|+ |..+||+|+||+|||||+|+++.|..+|+++|+|++...+ .+.+.+++.+...-...+.
T Consensus 1 M~~~aIILAgG~gtRl~pl-T~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~-~~~i~~~l~~g~~~g~~i~ 78 (293)
T 1fxo_A 1 MKRKGIILAGGSGTRLHPA-TLAISKQLLPVYDKPMIYYPLSTLMLAGIREILIISTPQD-TPRFQQLLGDGSNWGLDLQ 78 (293)
T ss_dssp -CEEEEEECCCCCTTTTTH-HHHSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTT-HHHHHHHHTTSGGGTCEEE
T ss_pred CCceEEEECCCCCCcCccc-cCCCCceeCeECCEeHHHHHHHHHHHCCCCEEEEEecccc-HHHHHHHHhcccccCceEE
Confidence 8899999999999999999 9999999999999999999999999999999998885433 3467777764100012345
Q ss_pred EEEcCCCCChHHHHHHHHHHcCCCcEEEEeCCcc-cCCChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCCccCCCC
Q 017849 81 VATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLV-SDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKK 159 (365)
Q Consensus 81 i~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~i-~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (365)
++.++.+.|++++++.+.+++.+++++++.||.+ .+.++..+++.|.+.+++++++...+. +
T Consensus 79 ~~~~~~~~G~~~al~~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~-----------------d 141 (293)
T 1fxo_A 79 YAVQPSPDGLAQAFLIGESFIGNDLSALVLGDNLYYGHDFHELLGSASQRQTGASVFAYHVL-----------------D 141 (293)
T ss_dssp EEECSSCCCGGGHHHHTHHHHTTSEEEEEETTEEEECTTHHHHHHHHHTCCSSEEEEEEECS-----------------C
T ss_pred EeeCCCCCCHHHHHHHHHHHhCCCCEEEEECChhccCccHHHHHHHHHhcCCCcEEEEEECC-----------------C
Confidence 5566778999999999998887678889999964 467899999999776677777655432 2
Q ss_pred CCcceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHH
Q 017849 160 PGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEV 223 (365)
Q Consensus 160 ~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~ 223 (365)
+..|+++.+|+++++ ..+.+ |+. ...++++++|+|+|+++++..+
T Consensus 142 p~~~g~v~~d~~g~v-~~~~e-----kp~-------------~~~s~~~~~Giy~~~~~~l~~~ 186 (293)
T 1fxo_A 142 PERYGVVEFDQGGKA-ISLEE-----KPL-------------EPKSNYAVTGLYFYDQQVVDIA 186 (293)
T ss_dssp GGGSEEEEECTTSCE-EEEEE-----SCS-------------SCSSSEEEEEEEEECTTHHHHH
T ss_pred cccCcEEEECCCCcE-EEEEE-----CCC-------------CCCCCeEEEEEEEEcHHHHHHH
Confidence 557899999987765 45653 321 1235789999999999998655
No 12
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=99.95 E-value=3.4e-27 Score=231.97 Aligned_cols=229 Identities=20% Similarity=0.265 Sum_probs=170.0
Q ss_pred eEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceEEEE
Q 017849 4 QVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVAT 83 (365)
Q Consensus 4 ~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i~~ 83 (365)
+|||||||.|+||+ ..+||+|+|++|||||+|++++|.++|+++|+|++++. .+.+.+++.. ++.++.
T Consensus 13 ~~vIlAaG~g~R~~----~~~pK~l~~i~gkpli~~~l~~l~~~g~~~iivv~~~~--~~~i~~~~~~------~i~~v~ 80 (468)
T 1hm9_A 13 FAIILAAGKGTRMK----SDLPKVLHKVAGISMLEHVFRSVGAIQPEKTVTVVGHK--AELVEEVLAG------QTEFVT 80 (468)
T ss_dssp EEEEECCCCCGGGC----CSSCGGGSEETTEEHHHHHHHHHHTTCCSEEEEEECTT--HHHHHHSSSS------SSEEEE
T ss_pred cEEEEcCCCCccCC----CCCCcEeeEECCccHHHHHHHHHHhcCCCCEEEEECCC--HHHHHHHhCC------CcEEEe
Confidence 69999999999994 47899999999999999999999999999999999865 2355555432 466776
Q ss_pred cCCCCChHHHHHHHHHHcC--CCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCCccCCCC
Q 017849 84 VPEDVGTAGALRAIAHHLT--AKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKK 159 (365)
Q Consensus 84 ~~~~~gt~~al~~~~~~i~--~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (365)
++...|++++++.+++++. .++|++++||. +.+.+++.+++.|++.+++++++..+.. +
T Consensus 81 ~~~~~G~~~sl~~a~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~~~~~~-----------------~ 143 (468)
T 1hm9_A 81 QSEQLGTGHAVMMTEPILEGLSGHTLVIAGDTPLITGESLKNLIDFHINHKNVATILTAETD-----------------N 143 (468)
T ss_dssp CSSCCCHHHHHHTTHHHHTTCCSEEEEEETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECS-----------------C
T ss_pred CCccCChHHHHHHHHHHhccCCCeEEEEeCCccccCHHHHHHHHHHHHhcCCcEEEEEeccC-----------------C
Confidence 6677899999999988885 46799999997 6678899999999988888888766532 2
Q ss_pred CCcceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHHHhcCccc----ccccc
Q 017849 160 PGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKDKF----QSLKQ 235 (365)
Q Consensus 160 ~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~~~~~~~~----~s~~~ 235 (365)
+..|+++.+|+++++ ..+.+++.... ....+.++++|+|+|+++.|.+++++.... .....
T Consensus 144 ~~~~g~v~~d~~g~v-~~~~ek~~~~~--------------~~~~~~~~~~Giy~f~~~~l~~~l~~~~~~~~~~~~~~~ 208 (468)
T 1hm9_A 144 PFGYGRIVRNDNAEV-LRIVEQKDATD--------------FEKQIKEINTGTYVFDNERLFEALKNINTNNAQGEYYIT 208 (468)
T ss_dssp CTTSCEEEECTTCCE-EEEECTTTCCT--------------TGGGCCEEEEEEEEEEHHHHHHHHTTCCSCSTTCSCCTT
T ss_pred CCceeEEEECCCCCE-EEEEECCCCCh--------------HHhcCeEEEEEEEEEEHHHHHHHHHhhccccCCCeEEHH
Confidence 556888888887764 56653221000 012357899999999999776665542211 01125
Q ss_pred chhhHHHHhhhcccccccCCCCCccccccCCCcchhhhhhccCCCcccccccCCCCCCCCCCceeEEEEEEecCCceEEE
Q 017849 236 DVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYCVR 315 (365)
Q Consensus 236 d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~r 315 (365)
|+++.+++.+ .++++|++ +|||..
T Consensus 209 d~~~~l~~~g------------------------------------------------------~~v~~~~~--~g~~~~ 232 (468)
T 1hm9_A 209 DVIGIFRETG------------------------------------------------------EKVGAYTL--KDFDES 232 (468)
T ss_dssp HHHHHHHHHT------------------------------------------------------CCEEEEEC--SSGGGG
T ss_pred HHHHHHHHCC------------------------------------------------------CEEEEEEc--CChHHh
Confidence 6677665442 34678887 667755
Q ss_pred --eCCHHHHHHHhHHHhhh
Q 017849 316 --LNSIQAFMDINRDVIGE 332 (365)
Q Consensus 316 --i~~~~~Y~~~n~~~l~~ 332 (365)
|+++..|.++++.+..+
T Consensus 233 i~i~t~~dl~~a~~~~~~~ 251 (468)
T 1hm9_A 233 LGVNDRVALATAESVMRRR 251 (468)
T ss_dssp CCCCSHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHH
Confidence 77999999998876543
No 13
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=99.95 E-value=4.6e-26 Score=210.32 Aligned_cols=184 Identities=20% Similarity=0.326 Sum_probs=142.9
Q ss_pred cceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceEE
Q 017849 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (365)
Q Consensus 2 ~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i 81 (365)
.|+|||||||.|+||+|+ |..+||+|+|++|||||+|+|+.+..+|+++|+|+++..+ .+.+.+++.+...-...+.+
T Consensus 3 ~m~aIILAgG~GtRl~pl-T~~~pK~llpi~gkpli~~~l~~l~~~gi~~Iivv~~~~~-~~~i~~~l~~g~~~g~~i~~ 80 (295)
T 1lvw_A 3 HMKGIVLAGGSGTRLYPI-TRAVSKQLLPIYDKPMIYYPLSVLMLAGIRDILIISTPRD-LPLYRDLLGDGSQFGVRFSY 80 (295)
T ss_dssp SCEEEEECCCCCSTTTTT-TTSSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTT-HHHHHHHHTTSGGGTSEEEE
T ss_pred ceEEEEECCCCCCccccc-cCCCCceecEECCeeHHHHHHHHHHHCCCCeEEEEeccch-HHHHHHHhhhccccCceEEE
Confidence 478999999999999999 9999999999999999999999999999999999886332 34677777641000223455
Q ss_pred EEcCCCCChHHHHHHHHHHcCCCcEEEEeCCcc-cCCChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCCccCCCCC
Q 017849 82 ATVPEDVGTAGALRAIAHHLTAKDVLVVSGDLV-SDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKP 160 (365)
Q Consensus 82 ~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~i-~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~ 160 (365)
+.++.+.|++++++.+.+++.+++++++.||.+ .+.++..+++.|.+.++.++++...+. ++
T Consensus 81 ~~~~~~~G~~~al~~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~-----------------dp 143 (295)
T 1lvw_A 81 RVQEEPRGIADAFIVGKDFIGDSKVALVLGDNVFYGHRFSEILRRAASLEDGAVIFGYYVR-----------------DP 143 (295)
T ss_dssp EECSSCCCGGGHHHHTHHHHTTSCEEEEETTCCEECTTHHHHHHHHHTCCSSEEEEEEECS-----------------CC
T ss_pred eeCCCCCChHHHHHHHHHHhCCCcEEEEECCccccCcCHHHHHHHHHHcCCCcEEEEEECC-----------------Cc
Confidence 666677899999999998887677888889964 367899999999776667777655432 25
Q ss_pred CcceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHH
Q 017849 161 GRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEV 223 (365)
Q Consensus 161 ~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~ 223 (365)
..|+++.+|+++++ ..+.+ |+. ...++++++|+|+|+++++..+
T Consensus 144 ~~~g~v~~d~~g~v-~~~~e-----kp~-------------~~~s~~~~~Giy~f~~~~l~~~ 187 (295)
T 1lvw_A 144 RPFGVVEFDSEGRV-ISIEE-----KPS-------------RPKSNYVVPGLYFYDNQVVEIA 187 (295)
T ss_dssp TTSEEEEECTTSBE-EEEEE-----SCS-------------SCSCSEECCSEEEECTTHHHHH
T ss_pred ccCCEEEECCCCcE-EEEEE-----CCC-------------CCCCCEEEEEeEEEcHHHHHHH
Confidence 57899999988765 56653 321 1234689999999999998655
No 14
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=99.95 E-value=4.4e-27 Score=226.69 Aligned_cols=220 Identities=20% Similarity=0.364 Sum_probs=159.5
Q ss_pred ceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceEEE
Q 017849 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVA 82 (365)
Q Consensus 3 ~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i~ 82 (365)
|+|||||||.|+||+|| |..+||+|+|++|+|||+|+|++|.++|+++|+|++++. +.+++.+.. .++.++
T Consensus 1 m~aiIlA~G~g~R~~pl-t~~~~K~ll~i~g~pli~~~l~~l~~~~~~~i~vv~~~~-----i~~~~~~~~---~~i~~~ 71 (401)
T 2ggo_A 1 MKAFILAAGSGERLEPI-THTRPKAFVPILSKPLIEYQIEYLRKCGIRDITVIVSSK-----NKEYFEKKL---KEISIV 71 (401)
T ss_dssp CEEEEECCCCCGGGTTG-GGTSCGGGCEETTEEHHHHHHHHHHHTTCCEEEEEECGG-----GHHHHHHHC---TTCEEE
T ss_pred CeEEEEcCcCccccCcc-cCCCCcceeeECCEeHHHHHHHHHHHCCCCEEEEEeCHH-----HHHHhhccC---CcEEEE
Confidence 57999999999999999 999999999999999999999999999999999999843 455555421 146666
Q ss_pred EcCC-CCChHHHHHHHHHHcCCCcEEEEeCCcccC--CChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCCccCCCC
Q 017849 83 TVPE-DVGTAGALRAIAHHLTAKDVLVVSGDLVSD--VPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKK 159 (365)
Q Consensus 83 ~~~~-~~gt~~al~~~~~~i~~~~~lv~~~D~i~~--~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~ 159 (365)
..+. ..|++++++.+.+ .++++++.||+.+. .+++.+++ .+++++++.+.. +
T Consensus 72 ~~~~~~~g~~~~l~~~~~---~~~~lv~~~D~~~~~~~~~~~l~~-----~~~~~i~~~~~~-----------------~ 126 (401)
T 2ggo_A 72 TQKDDIKGTGAAILSAKF---NDEALIIYGDLFFSNEKEICNIIT-----LKENAIIGVKVS-----------------N 126 (401)
T ss_dssp ECCTTCCBSTTTGGGCCC---SSEEEEEETTEEESCSHHHHHHTT-----CSSEEEEEEECS-----------------C
T ss_pred eCCCCCCChHHHHHHhcc---CCCEEEEeCccccccHHHHHHHHH-----hcCCEEEEEEcC-----------------C
Confidence 6665 6888888876654 47799999998765 45666654 355676665432 2
Q ss_pred CCcceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHHHhcCc----ccccccc
Q 017849 160 PGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKD----KFQSLKQ 235 (365)
Q Consensus 160 ~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~~~~~~----~~~s~~~ 235 (365)
+..|+++..++++++ ..+.+ ++. ...++++++|+|+|++++|..+ ++.. +..++ .
T Consensus 127 ~~~~~~v~~~~~g~v-~~~~e-----k~~-------------~~~~~~~~~Giy~~~~~~~~~l-~~~~~~~~~~~~~-~ 185 (401)
T 2ggo_A 127 PKDYGVLVLDNQNNL-SKIIE-----KPE-------------IPPSNLINAGIYKLNSDIFTYL-DKISISERGELEL-T 185 (401)
T ss_dssp CSSSCEEEECTTSSE-EEEEC-----SCS-------------SCSCSEEEEEEEEEETHHHHHH-HHSCCCSSSCBCH-H
T ss_pred CcceeEEEECCCCeE-EEEEE-----CCC-------------CCCCcEEEEEEEEEcHHHHHHh-hhcCcCCCCceEH-H
Confidence 446788888877764 45542 221 1245789999999999999755 3321 01112 2
Q ss_pred chhhHHHHhhhcccccccCCCCCccccccCCCcchhhhhhccCCCcccccccCCCCCCCCCCceeEEEEEEecCCceEEE
Q 017849 236 DVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYCVR 315 (365)
Q Consensus 236 d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~r 315 (365)
++++.+ ..+ .++++|.. +++|..
T Consensus 186 ~~~~~~-~~g------------------------------------------------------~~v~~~~~--~~~~~d 208 (401)
T 2ggo_A 186 DAINLM-AKD------------------------------------------------------HRVKVIEY--EGYWMD 208 (401)
T ss_dssp HHHHHH-HHH------------------------------------------------------SCEEEEEC--CSCEEE
T ss_pred HHHHHH-HCC------------------------------------------------------CcEEEEEe--cceEEc
Confidence 455543 221 23566666 569999
Q ss_pred eCCHHHHHHHhHHHhhhhc
Q 017849 316 LNSIQAFMDINRDVIGEAN 334 (365)
Q Consensus 316 i~~~~~Y~~~n~~~l~~~~ 334 (365)
|+|+..|.++++.++.++.
T Consensus 209 I~t~edl~~a~~~l~~~~~ 227 (401)
T 2ggo_A 209 IGKPWNIIDVNKWALDNLV 227 (401)
T ss_dssp CCSHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHhcc
Confidence 9999999999999998753
No 15
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=99.95 E-value=4.1e-27 Score=219.03 Aligned_cols=192 Identities=16% Similarity=0.197 Sum_probs=130.1
Q ss_pred CcceEEEEcCCCCCCCCCCCCC-CCCceecee-CCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCc-
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSK-EVPKALLPV-ANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRL- 77 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~-~~pK~llpv-~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~- 77 (365)
|+|.|||||||.|+||+|| |. .+||+|+|+ +|+|||+|+++++.++ +++|+|++++... +.+.+++.+.+ ..
T Consensus 3 ~~~~avIlAgG~gtRl~pl-t~~~~pK~ll~i~gg~pli~~~l~~l~~~-~~~i~vv~~~~~~-~~i~~~~~~~~--~~~ 77 (308)
T 2qh5_A 3 LKIKNILLSGGSGKRLWPL-SRSLYPKQFLKLFDHKSLFELSFKRNASL-VDETLIVCNEKHY-FLALEEIKNEI--KNK 77 (308)
T ss_dssp CCEEEEEECC--------------CCGGGCTTBTTBCHHHHHHHHHHTT-CSEEEEEEEGGGH-HHHHHHTTTTC--SSC
T ss_pred CccEEEEEcCCCCccCCcc-CCCCCCCEEEECCCCCCHHHHHHHHHHcc-CCCEEEEEChhHH-HHHHHHHHHhh--CCC
Confidence 5689999999999999999 85 799999999 5999999999999999 9999999986532 36677776511 12
Q ss_pred ceEEEEcCCCCChHHHHHHHHHHcCCC-cEEEEeCCccc-CCC-hHHHHHH---HHhcCCeEEEEEeeeccCCCccCCCC
Q 017849 78 HVEVATVPEDVGTAGALRAIAHHLTAK-DVLVVSGDLVS-DVP-PGAVTAA---HRRHDAVVTAMICSVPVSGLSEAGSS 151 (365)
Q Consensus 78 ~v~i~~~~~~~gt~~al~~~~~~i~~~-~~lv~~~D~i~-~~~-l~~~l~~---h~~~~a~~t~l~~~~~~~~~~~~~~~ 151 (365)
.+.++.++...|++++++.+...+..+ .|++++||.++ +.+ +..+++. |.+.++.+|+.+....
T Consensus 78 ~~~~i~~~~~~gt~~al~~a~~~l~~~~~~lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~---------- 147 (308)
T 2qh5_A 78 SVGFLLESLSKNTANAIALSALMSDKEDLLIVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVTFGVSIDK---------- 147 (308)
T ss_dssp EEEEEEESSCCCHHHHHHHHHHTSCTTSEEEEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEEEEEECSS----------
T ss_pred ccEEEeCCCCCChHHHHHHHHHHhCCCCeEEEEcCCccccCHHHHHHHHHHHHHHHhcCCEEEEEEecCC----------
Confidence 345666777899999999998888534 49999999877 555 8899887 6777788888765432
Q ss_pred CCccCCCCCCcceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHHHh
Q 017849 152 GAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLD 225 (365)
Q Consensus 152 ~~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~~~ 225 (365)
.+..|+++..|+++++ ..+.++++... ....+. ..+.++++|+|+|++++|...++
T Consensus 148 -------~~~~~g~i~~d~~~~V-~~~~Ekp~~~~----~~~~~~------~g~~~~n~Giy~~~~~~ll~~l~ 203 (308)
T 2qh5_A 148 -------PNTEFGYIESPNGLDV-KRFIEKPSLDK----AIEFQK------SGGFYFNSGMFVFQAGVFLDELK 203 (308)
T ss_dssp -------CCTTSEEEECSSSSBC-SEEEESCCHHH----HHHHHH------HCCEEEEEEEEEEEHHHHHHHHH
T ss_pred -------CCCCceEEEECCCCEE-EEEEECCChHH----HHHHhh------cCCeEEEeEEEEEEHHHHHHHHH
Confidence 2457899988766654 45553322110 001110 12468999999999998644443
No 16
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=99.95 E-value=2.3e-26 Score=212.48 Aligned_cols=183 Identities=20% Similarity=0.325 Sum_probs=141.4
Q ss_pred ceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceEEE
Q 017849 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVA 82 (365)
Q Consensus 3 ~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i~ 82 (365)
|+|||||||.|+||+|+ |..+||+|+|++|||||+|+++.|..+|+++|+|+++..+ .+.+.+++.+...-...+.++
T Consensus 4 m~aIILAgG~GtRl~pl-T~~~pK~llpi~gkpli~~~l~~l~~~gi~~I~vv~~~~~-~~~i~~~l~~g~~~g~~i~~~ 81 (296)
T 1mc3_A 4 MKGIILAGGSGTRLHPI-TRGVSKQLLPIYDKPMIYYPLSVLMLAGIREILIITTPED-KGYFQRLLGDGSEFGIQLEYA 81 (296)
T ss_dssp CEEEEECCCCCGGGHHH-HTTSCGGGSEETTEETTHHHHHHHHHTTCCEEEEEECTTT-HHHHHHHHTTSGGGTCEEEEE
T ss_pred cEEEEECCCCCCcCCcc-cCCCCceeeEECCeeHHHHHHHHHHhCCCCcEEEEechhH-HHHHHHHHhcccccCceEEEe
Confidence 68999999999999999 9999999999999999999999999999999999886332 346777776411001234555
Q ss_pred EcCCCCChHHHHHHHHHHcCCCcEEEEeCCcc-cCCChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCCccCCCCCC
Q 017849 83 TVPEDVGTAGALRAIAHHLTAKDVLVVSGDLV-SDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPG 161 (365)
Q Consensus 83 ~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~i-~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (365)
.++...|++++++.+.+++.+++++++.||.+ .+.++..+++.|.+.++.++++...+. ++.
T Consensus 82 ~~~~~~G~~~al~~a~~~i~~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v~~~~v~-----------------dp~ 144 (296)
T 1mc3_A 82 EQPSPDGLAQAFIIGETFLNGEPSCLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVM-----------------DPE 144 (296)
T ss_dssp ECSSCCCSTHHHHHTHHHHTTSCEEEEETTEEEECSSCHHHHHHHTTCCSSEEEEEEECS-----------------CCS
T ss_pred ccCCCCCHHHHHHHHHHHhCCCCEEEEECCccccccCHHHHHHHHHHcCCCCEEEEEECC-----------------Ccc
Confidence 66777999999999998887677888889964 467899999999766667777655432 255
Q ss_pred cceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHH
Q 017849 162 RYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEV 223 (365)
Q Consensus 162 ~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~ 223 (365)
.|+++.+|++++ +..+.+ |+. ...++++++|+|+|+++++..+
T Consensus 145 ~yg~v~~d~~g~-v~~~~e-----kp~-------------~~~s~~~~~Giy~~~~~~l~~~ 187 (296)
T 1mc3_A 145 RFGVVEFDDNFR-AISLEE-----KPK-------------QPKSNWAVTGLYFYDSKVVEYA 187 (296)
T ss_dssp SSBBCEEETTEE-EEECCB-----SCS-------------SCSCSEEEEEEEECCTHHHHHH
T ss_pred cCCEEEECCCCc-EEEEEE-----CCC-------------CCCCCEEEEEEEEEcHHHHHHH
Confidence 789999998775 456653 321 1235789999999999998654
No 17
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=99.94 E-value=2.6e-26 Score=207.85 Aligned_cols=168 Identities=14% Similarity=0.143 Sum_probs=126.5
Q ss_pred EEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHh-CCCCeEEEEecCcch-HHHHHHHHHhhhcCCcceEEE
Q 017849 5 VVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLEL-SNIKDLIVVVEGADA-ALRVGGWISAAYVDRLHVEVA 82 (365)
Q Consensus 5 avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~-~gi~~v~vv~~~~~~-~~~i~~~~~~~~~~~~~v~i~ 82 (365)
+||||||.||||+|+ |..+||+|+||+|||||+|+|+++.+ +|+++|+|++++... .+.+.+++..+... ....++
T Consensus 2 ~iIlAaG~GtRl~pl-t~~~PK~llpv~gkpli~~~l~~l~~~~gi~~iivv~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 79 (255)
T 4evw_A 2 IVIPMAGMSSRFFKA-GYTQPKYMLEAHGQTLFEHSVNSFAAYFASTPFLFIVRNVYDTAVFVREKATQLGIK-QFYIAE 79 (255)
T ss_dssp EEEECCSCCHHHHHT-TCCSCGGGCEETTEEHHHHHHGGGGGGTTTSCEEEEEESSTTHHHHHHHHHHHHTCS-SEEEEE
T ss_pred EEEEcCCCCcccccC-CCCCCccccEECCeEHHHHHHHHHhccCCCceEEEEECchhhhHHHHHHHHHHcCCC-CceEEE
Confidence 899999999999999 99999999999999999999999999 899999999986531 12333333322111 112345
Q ss_pred EcCCCCChHHHHHHHHHHc------CCCcEEEEeCCccc-CCChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCCcc
Q 017849 83 TVPEDVGTAGALRAIAHHL------TAKDVLVVSGDLVS-DVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKD 155 (365)
Q Consensus 83 ~~~~~~gt~~al~~~~~~i------~~~~~lv~~~D~i~-~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~ 155 (365)
.++...||++|++.+++.+ .+++|+|++||.++ +.++..+ ..+++.++++...+
T Consensus 80 ~~~~~~Gt~~av~~a~~~l~~~~~~~~~~~lV~~gD~l~~~~~~~~~-----~~~~~~~i~~~~~~-------------- 140 (255)
T 4evw_A 80 LHTETRGQAETVTLGLEELAKQGVDYQGSITVFNIDTFRPNFVFPDI-----SQHSDGYLEVFQGG-------------- 140 (255)
T ss_dssp ESSCCSSHHHHHHHHHHHHHHTTCCCCSCEEECCTTEECTTCCCCGG-----GGSSSEEEEEEECC--------------
T ss_pred eCCCCCCHHHHHHHHHHHHhhcccCCCCcEEEEeCCEEEecchhHHH-----hhcCCcEEEEEecC--------------
Confidence 5677899999999999988 25679999999877 5666543 24567788776643
Q ss_pred CCCCCCcceEEEEcCCC--cEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHH
Q 017849 156 KTKKPGRYNIIGMDPTK--QFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRS 218 (365)
Q Consensus 156 ~~~~~~~~~~v~~d~~~--~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~ 218 (365)
.+ .||++..|++| ++ ..+.+ |. ..++++++|+|+|++.
T Consensus 141 ---~p-~yG~v~~d~~g~~~V-~~i~E-----K~---------------~~s~~~~~GiY~f~~~ 180 (255)
T 4evw_A 141 ---GD-NWSFAKPEHAGSTKV-IQTAE-----KN---------------PISDLCSTGLYHFNRK 180 (255)
T ss_dssp ---SS-CSCEEEESSTTCCBE-EEEES-----SS---------------CSSSEEEEEEEEESCH
T ss_pred ---CC-ceeEEEECCCCCeEE-EEEEe-----cc---------------CccCcEEEeEEEECcH
Confidence 13 78999999876 64 56663 32 1357999999999986
No 18
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.94 E-value=7e-26 Score=222.01 Aligned_cols=180 Identities=18% Similarity=0.289 Sum_probs=135.5
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceE
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~ 80 (365)
|++.|||||||.|+||+ ..+||+|+|++|+|||+|++++|..+|+++|+|++++. .+.+.+++.. .++.
T Consensus 7 ~~~~aiIlA~G~g~Rl~----~~~pK~l~~i~g~pli~~~l~~l~~~~~~~i~vv~~~~--~~~i~~~~~~-----~~~~ 75 (459)
T 4fce_A 7 SSMSVVILAAGKGTRMY----SDLPKVLHPLAGKPMVQHVIDAAMKLGAQHVHLVYGHG--GELLKKTLAD-----PSLN 75 (459)
T ss_dssp CCEEEEEEECCCCGGGC----CSSCGGGSEETTEEHHHHHHHHHHHHTCSCEEEEESSC--HHHHHHHC----------C
T ss_pred CcceEEEECCCCCccCC----CCCCcccCeeCCeeHHHHHHHHHHhCCCCcEEEEeCCC--HHHHHHHhcc-----CCcE
Confidence 57899999999999994 47899999999999999999999999999999999865 3467776653 2455
Q ss_pred EEEcCCCCChHHHHHHHHHHcCC-CcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCCccCC
Q 017849 81 VATVPEDVGTAGALRAIAHHLTA-KDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKT 157 (365)
Q Consensus 81 i~~~~~~~gt~~al~~~~~~i~~-~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~ 157 (365)
++.++...|++++++.+++++.. +++++++||. +.+.+++.+++.|++ ++++++..+..
T Consensus 76 ~v~~~~~~g~~~~i~~~~~~~~~~~~~lv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~---------------- 137 (459)
T 4fce_A 76 WVLQAEQLGTGHAMQQAAPHFADDEDILMLYGDVPLISVDTLQRLLAAKPE--GGIGLLTVKLD---------------- 137 (459)
T ss_dssp EEECSSCCCHHHHHHHHGGGSCTTSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECS----------------
T ss_pred EEeCCCCCCcHHHHHHHHHhcCCCCcEEEEeCCcccCCHHHHHHHHHHHhh--CCEEEEEEecC----------------
Confidence 66667789999999999998864 6799999996 677889999998865 45555554432
Q ss_pred CCCCcceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHHHhc
Q 017849 158 KKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQ 226 (365)
Q Consensus 158 ~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~~~~ 226 (365)
++..|+++..| +++ +..+.++++.... ...+.++++|+|+|+++.|..+++.
T Consensus 138 -~~~~~g~v~~~-~g~-v~~~~ek~~~~~~--------------~~~~~~~~~Giy~~~~~~l~~~l~~ 189 (459)
T 4fce_A 138 -NPSGYGRIVRE-NGD-VVGIVEHKDASDA--------------QREINEINTGILVANGRDLKRWLSL 189 (459)
T ss_dssp -CCTTSCEEEEE-TTE-EEEEECGGGCCTT--------------GGGCCEEEEEEEEEEHHHHHHHHHT
T ss_pred -CCCcccEEEeC-CCc-EEEEEECCCCChH--------------HhhccEEEEEEEEEEHHHHHHHHHH
Confidence 24568888887 454 4566532211100 1245789999999999988777654
No 19
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.94 E-value=1.3e-25 Score=219.99 Aligned_cols=231 Identities=13% Similarity=0.217 Sum_probs=165.0
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceE
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~ 80 (365)
|++.|||||||.|+|| ...+||+|+|++|||||+|+|++|.++|+++|+|++++. .+.+.+++.. .++.
T Consensus 4 ~~~~aiIlA~G~g~Rl----~~~~pK~l~~i~gkpli~~~l~~l~~~~~~~iivv~~~~--~~~i~~~~~~-----~~~~ 72 (456)
T 2v0h_A 4 KALSAVILAAGKGTRM----YSDLPKVLHTIAGKPMVKHVIDTAHQLGSENIHLIYGHG--GDLMRTHLAN-----EQVN 72 (456)
T ss_dssp CCEEEEEECCCCCGGG----CSSSCGGGSEETTEEHHHHHHHHHHHTTCSCEEEEECTT--HHHHHHHTTT-----CCCE
T ss_pred CcceEEEECCCCCccc----CCCCCccccEECCccHHHHHHHHHHhCCCCcEEEEeCCC--HHHHHHHhhc-----CCcE
Confidence 5788999999999999 446899999999999999999999999999999999865 2466666643 1466
Q ss_pred EEEcCCCCChHHHHHHHHHHcC-CCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCCccCC
Q 017849 81 VATVPEDVGTAGALRAIAHHLT-AKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKT 157 (365)
Q Consensus 81 i~~~~~~~gt~~al~~~~~~i~-~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~ 157 (365)
++.++...|++++++.+++++. .+++++++||. +.+.+++.+++.|++ ++++++..+..
T Consensus 73 ~v~~~~~~g~~~~~~~~~~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~---------------- 134 (456)
T 2v0h_A 73 WVLQTEQLGTAHAVQQAAPFFKDNENIVVLYGDAPLITKETLEKLIEAKPE--NGIALLTVNLD---------------- 134 (456)
T ss_dssp EEECSCCCCHHHHHHHHGGGCCTTSEEEEEETTCTTCCHHHHHHHHHHCCT--TSEEEEEEECS----------------
T ss_pred EEeCCCCCCcHHHHHHHHHhcCCCCeEEEEcCCcceeCHHHHHHHHHHHhc--CCEEEEEeecC----------------
Confidence 7767778999999999998885 57799999996 667789999998876 56676655432
Q ss_pred CCCCcceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHHHhcCccc----ccc
Q 017849 158 KKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQKDKF----QSL 233 (365)
Q Consensus 158 ~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~~~~~~~~----~s~ 233 (365)
++..|+.+..| +++ +..+.++++. ... .....++++|+|+|+++.|..+++..... ...
T Consensus 135 -~~~~~g~v~~~-~g~-v~~~~ek~~~------~~~--------~~~~~~~~~Giy~~~~~~l~~~l~~~~~~~~~~~~~ 197 (456)
T 2v0h_A 135 -NPTGYGRIIRE-NGN-VVAIVEQKDA------NAE--------QLNIKEVNTGVMVSDGASFKKWLARVGNNNAQGEYY 197 (456)
T ss_dssp -SCTTSCEEEEE-TTE-EEEEECTTTC------CHH--------HHTCCEEEEEEEEEEHHHHHHHHTTCCCCSTTCCCC
T ss_pred -CCCccceEEEc-CCc-EEEEEECCCC------Chh--------HhcCcEEEEEEEEEEHHHHHHHHHHhccccccccEE
Confidence 24567888777 554 4566532211 000 11347889999999999776666542211 011
Q ss_pred ccchhhHHHHhhhcccccccCCCCCccccccCCCcchhhhhhccCCCcccccccCCCCCCCCCCceeEEEEEEecCCceE
Q 017849 234 KQDVLPYLVRSQLKSEILINGAPQGQQAKENGNDKVSYRILANASTPSFHELYALGPNGSAPVRRTHKCCVYIASNSKYC 313 (365)
Q Consensus 234 ~~d~lp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 313 (365)
-.|+++.+...+ .++++|..++...+
T Consensus 198 ~~d~~~~~~~~g------------------------------------------------------~~v~~~~~~~~~~~ 223 (456)
T 2v0h_A 198 LTDLIALANQDN------------------------------------------------------CQVVAVQATDVMEV 223 (456)
T ss_dssp GGGHHHHHHHTT------------------------------------------------------CCEEEEECSCTGGG
T ss_pred HHHHHHHHHHcC------------------------------------------------------CEEEEEEeCCcceE
Confidence 145555544332 34577766322345
Q ss_pred EEeCCHHHHHHHhHHHhh
Q 017849 314 VRLNSIQAFMDINRDVIG 331 (365)
Q Consensus 314 ~ri~~~~~Y~~~n~~~l~ 331 (365)
..|+|+..|.++++.+..
T Consensus 224 ~~I~tpeDl~~a~~~l~~ 241 (456)
T 2v0h_A 224 EGANNRLQLAALERYFQN 241 (456)
T ss_dssp CCCSSHHHHHHHHHHHHH
T ss_pred EeCCCHHHHHHHHHHHHH
Confidence 689999999999987654
No 20
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=99.92 E-value=1.5e-24 Score=196.17 Aligned_cols=168 Identities=16% Similarity=0.247 Sum_probs=119.0
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceE
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~ 80 (365)
|+|.|||||||.|+||+|| |..+||+|+|++|+|||+|+++++.++|+++|+|++++.. +.+.++... +++.
T Consensus 24 ~~~~aiIlAaG~gtRl~pl-t~~~pK~l~~i~gkpli~~~l~~l~~~g~~~i~vv~~~~~--~~i~~~~~~-----~~~~ 95 (254)
T 1jyk_A 24 IRVKAIILAAGLGTRLRPL-TENTPKALVQVNQKPLIEYQIEFLKEKGINDIIIIVGYLK--EQFDYLKEK-----YGVR 95 (254)
T ss_dssp CCCEEEEEECSCCGGGTTT-TSSSCGGGCEETTEEHHHHHHHHHHHTTCCCEEEEECTTG--GGGTHHHHH-----HCCE
T ss_pred cCceEEEECCCCcccCCcc-cCCCCCEEeeECCEEHHHHHHHHHHHCCCCeEEEEeCCcH--HHHHHHHHh-----CCcE
Confidence 4688999999999999999 9999999999999999999999999999999999998653 345444432 2466
Q ss_pred EEEcCC--CCChHHHHHHHHHHcCCCcEEEEeCCcccCCChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCCccCCC
Q 017849 81 VATVPE--DVGTAGALRAIAHHLTAKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTK 158 (365)
Q Consensus 81 i~~~~~--~~gt~~al~~~~~~i~~~~~lv~~~D~i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~ 158 (365)
++..+. ..|++++++.+++.+. ++++++||+++..++ ++.+.+.++.+|+. .. +|
T Consensus 96 iv~~~~~~~~g~~~al~~a~~~~~--~~lv~~~D~~~~~~~---~~~~~~~~~~~t~~---~~--~~------------- 152 (254)
T 1jyk_A 96 LVFNDKYADYNNFYSLYLVKEELA--NSYVIDADNYLFKNM---FRNDLTRSTYFSVY---RE--DC------------- 152 (254)
T ss_dssp EEECTTTTTSCTHHHHHTTGGGCT--TEEEEETTEEESSCC---CCSCCCSEEEEECE---ES--SC-------------
T ss_pred EEECCCccCCCcHHHHHHHHHHCC--CEEEEeCCcccCHHH---HHHHHhCCceEEEE---cc--cC-------------
Confidence 666543 5799999998888773 589999997665442 22222233333332 11 11
Q ss_pred CCCcceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHH
Q 017849 159 KPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEV 223 (365)
Q Consensus 159 ~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~ 223 (365)
...|+++ +|++|++ ..+.+ ++ ...++++|+|+|+++.+..+
T Consensus 153 -~~~~~v~-~d~~g~v-~~~~e-----~~----------------~~~~~~~Giy~~~~~~~~~l 193 (254)
T 1jyk_A 153 -TNEWFLV-YGDDYKV-QDIIV-----DS----------------KAGRILSGVSFWDAPTAEKI 193 (254)
T ss_dssp -SSCCEEE-ECTTCBE-EEEEC-----CC----------------SSEEBCCSEEEECHHHHHHH
T ss_pred -CCCeEEE-ECCCCeE-EEEEE-----CC----------------CCCcEEEEEEEEcHHHHHHH
Confidence 1246655 7877764 45542 21 13578999999999755433
No 21
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=99.92 E-value=9.6e-24 Score=190.69 Aligned_cols=191 Identities=18% Similarity=0.204 Sum_probs=136.3
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceE
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~ 80 (365)
|++.|||||||.|+|| . ||+|+|++|||||+|+++++..+|+++|+|+++. +.+.+++..+ ++.
T Consensus 1 M~~~aiIlA~G~stRl----p---~K~L~~i~GkPli~~~l~~l~~~~~~~ivVv~~~----~~i~~~~~~~-----g~~ 64 (252)
T 3oam_A 1 MSFTVVIPARYQSTRL----P---GKPLADIGGKPMIQWVYEQAMQAGADRVIIATDD----ERVEQAVQAF-----GGV 64 (252)
T ss_dssp CCEEEEEECCCCCSSS----T---TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC----HHHHHHHHHT-----TCE
T ss_pred CceEEEEecCcCCCCC----C---CcceeeECCEEHHHHHHHHHHhCCCCeEEEECCH----HHHHHHHHHc-----CCE
Confidence 8999999999999999 3 7999999999999999999999999999999862 4677777642 455
Q ss_pred EEE--cCCCCChHHHHHHHHHHc---CCCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCC
Q 017849 81 VAT--VPEDVGTAGALRAIAHHL---TAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGA 153 (365)
Q Consensus 81 i~~--~~~~~gt~~al~~~~~~i---~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~ 153 (365)
++. ++...|+++ +..+.+.+ ..+.|++++||. +...++..+++.|.+.++++++++.+.. +|.++.
T Consensus 65 v~~~~~~~~~Gt~~-~~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~--~~~~~~---- 137 (252)
T 3oam_A 65 VCMTSPNHQSGTER-LAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIE--DEAEVF---- 137 (252)
T ss_dssp EEECCTTCCSHHHH-HHHHHHHTTCCTTSEEEECCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEEC--CHHHHT----
T ss_pred EEEcCCCCCCcHHH-HHHHHHhcCcCCCCEEEEEeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecC--CHHHhh----
Confidence 554 445688887 55566666 346799999995 6677899999999888888888877654 222210
Q ss_pred ccCCCCCCcceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHHHhc
Q 017849 154 KDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQ 226 (365)
Q Consensus 154 ~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~~~~ 226 (365)
..+.+.|.+|++|+++ .|.++ +..-.+.-............++++|+|+|++++|..+...
T Consensus 138 ------~p~~g~vv~d~~g~v~-~fsr~-----~i~~~~~~~~~~~~~~~~~~~~n~GiY~~~~~~l~~~~~~ 198 (252)
T 3oam_A 138 ------NPNAVKVITDKSGYAL-YFSRA-----TIPWDRDNFAKADKAIVQPLLRHIGIYAYRAGFINTYLDW 198 (252)
T ss_dssp ------CTTSCEEEECTTSBEE-EEESS-----CSSCCHHHHHSSSCCCCSCEEEEEEEEEEETTHHHHHHHS
T ss_pred ------CCCceEEEECCCCeEE-EEeCC-----CCCCCCCccccccccccccceEEEEEEEcCHHHHHHHHcC
Confidence 1123889999988764 55432 2111111000000000235789999999999999887654
No 22
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=99.91 E-value=6e-24 Score=199.62 Aligned_cols=190 Identities=19% Similarity=0.231 Sum_probs=133.5
Q ss_pred ceEEEEcCCCCCCCCCCCCCCCCceeceeCC-cchHHHHHHHHHhC-CCCeEEEEecCcchHHHHHHHHHhhhcCCcceE
Q 017849 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVAN-RPVLSYVLEQLELS-NIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (365)
Q Consensus 3 ~~avIlA~G~g~rl~pL~t~~~pK~llpv~g-kplI~~~L~~l~~~-gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~ 80 (365)
|.+||||||.||||+||++..+||+|+|++| +|||+|+++++..+ |+++|+|++++.+. ..+.+++... ....
T Consensus 2 m~~VILAgG~GtRl~Pls~~~~pK~ll~l~g~~pli~~~l~~l~~~~~~~~iivvt~~~~~-~~i~~~l~~~----~~~~ 76 (336)
T 2x65_A 2 MKALILAGGSGERFWPLSTPETPKQFLKLFGNKSLMRWTFERVLEEMDPKDVIVVTHKDYV-ERTKKELPEL----PDEN 76 (336)
T ss_dssp CEEEEECCCBCGGGTTTSCTTCBGGGCCCBTTBCHHHHHHHHHHTTCCGGGEEEEEEGGGH-HHHHHHCTTS----CGGG
T ss_pred eEEEEECCCCCccCCCCcCCCCCceEEECCCCCcHHHHHHHHHhccCCCCcEEEEcChHHH-HHHHHHhhcc----ccce
Confidence 6899999999999999933789999999999 99999999999997 89999999986532 3566666542 1123
Q ss_pred EEEcCCCCChHHHHHHHHHHcC-CCcEEEEeCCcccCC--ChH----HHHHHHHhcCCeEEEEEeeeccCCCccCCCCCC
Q 017849 81 VATVPEDVGTAGALRAIAHHLT-AKDVLVVSGDLVSDV--PPG----AVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGA 153 (365)
Q Consensus 81 i~~~~~~~gt~~al~~~~~~i~-~~~~lv~~~D~i~~~--~l~----~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~ 153 (365)
++.++...||++++..+...+. ++.+++++||+++.. ++. .+++.|++.++.+|+.+.+..
T Consensus 77 ii~e~~~~gta~ai~~a~~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~i~p~~------------ 144 (336)
T 2x65_A 77 IIAEPMKKNTAPACFIGTKLADDDEPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGLFTFGIVPTR------------ 144 (336)
T ss_dssp EEEESSCCCHHHHHHHHHTTSCTTCEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSEEEEEECCCS------------
T ss_pred EEeCCCCCCcHHHHHHHHHhhCCCCEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCeEEEEeeccc------------
Confidence 5666778999999998877664 345999999987653 444 444557665777887664432
Q ss_pred ccCCCCCCcceEEEEcCC----CcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHHH
Q 017849 154 KDKTKKPGRYNIIGMDPT----KQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (365)
Q Consensus 154 ~~~~~~~~~~~~v~~d~~----~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~~ 224 (365)
....||++..+++ ...+..+.++++.+. ..+.+. ....++++|+|+|++++|...+
T Consensus 145 -----~~~~yG~I~~~~~~~~~~~~V~~f~EKp~~~~----a~~~~~------~g~y~~n~Giy~~~~~~ll~~l 204 (336)
T 2x65_A 145 -----PETGYGYIEIGEELEEGVHKVAQFREKPDLET----AKKFVE------SGRFLWNSGMFLWKAREFIEEV 204 (336)
T ss_dssp -----CCSSSEEEEEEEEEETTEEEEEEEEESCCHHH----HHHHHH------HTCEEEEEEEEEEEHHHHHHHH
T ss_pred -----CCCCceEEEECCccCCCccEEEEEEECCChHH----HHHHHh------cCCeEEEeeeEEEEHHHHHHHH
Confidence 1357899987753 123556664332211 011111 1125899999999999884333
No 23
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=99.91 E-value=4.6e-24 Score=200.50 Aligned_cols=185 Identities=21% Similarity=0.260 Sum_probs=129.0
Q ss_pred CcceEEEEcCCCCCCCCCCCC-CCCCceeceeCC-cchHHHHHHHHHhC-CCCeEEEEecCcchHHHHHHHHHhhhcCCc
Q 017849 1 MDFQVVVLAGGTSKKLVPLVS-KEVPKALLPVAN-RPVLSYVLEQLELS-NIKDLIVVVEGADAALRVGGWISAAYVDRL 77 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t-~~~pK~llpv~g-kplI~~~L~~l~~~-gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~ 77 (365)
|+|.+||||||.|+||+|| | ..+||+|+|++| +|||+|+++++..+ |+++++|++++.+. ..+.+++.. .
T Consensus 1 M~m~~VILAgG~GtRl~Pl-s~~~~pK~ll~l~G~~pli~~~l~~l~~~~~~~~iiVvt~~~~~-~~i~~~l~~-----~ 73 (337)
T 2cu2_A 1 MKTYALVMAGGRGERLWPL-SREDRPKPFLPLFEGKTLLEATLERLAPLVPPERTLLAVRRDQE-AVARPYADG-----I 73 (337)
T ss_dssp CCEEEEEECCCCCGGGTTT-CBTTBCGGGCBCGGGCBHHHHHHHHHTTTSCGGGEEEEEEGGGH-HHHGGGCSS-----S
T ss_pred CCeEEEEEcCCCcccCCcc-CCCCCCceEEEcCCCChHHHHHHHHHhCcCCCCCEEEEcChHHH-HHHHHHhcc-----C
Confidence 8899999999999999999 7 689999999999 99999999999998 89999999986532 233333321 2
Q ss_pred ceEEEEcCCCCChHHHHHHHHHHc----CCCcEEEEeCCcccCC--ChHHHHH----HHHhcCCeEEEEEeeeccCCCcc
Q 017849 78 HVEVATVPEDVGTAGALRAIAHHL----TAKDVLVVSGDLVSDV--PPGAVTA----AHRRHDAVVTAMICSVPVSGLSE 147 (365)
Q Consensus 78 ~v~i~~~~~~~gt~~al~~~~~~i----~~~~~lv~~~D~i~~~--~l~~~l~----~h~~~~a~~t~l~~~~~~~~~~~ 147 (365)
.+ +.++...||+.++..+.. + .++.+++++||+++.. .+..+++ .|++ ++.+|+.+.+..
T Consensus 74 ~~--i~e~~~~gta~ai~~a~~-l~~~~~~~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~-~~~vt~~i~p~~------ 143 (337)
T 2cu2_A 74 RL--LLEPLGRDTAGAVLLGVA-EALKEGAERLLVLPADHYVGDDEAYREALATMLEAAEE-GFVVALGLRPTR------ 143 (337)
T ss_dssp EE--EEESSCCHHHHHHHHHHH-HHHHHTCSEEEEEESSCEESCHHHHHHHHHHHHHHCCT-TCEEEEEECCSS------
T ss_pred ce--EecCCCCCcHHHHHHHHH-HhccCCCCEEEEEECCccCCCHHHHHHHHHHHHHHHHc-CCeEEEeeccCC------
Confidence 22 455677899999988865 4 2467999999976643 3444444 3444 677777765432
Q ss_pred CCCCCCccCCCCCCcceEEEEcCC---CcEEEEeeccccccccccccHHHHhhcCcceecc-CcccceeeeeCHHHHHHH
Q 017849 148 AGSSGAKDKTKKPGRYNIIGMDPT---KQFLLHIATGAELEKDTRIRKSILRAVGQMDIRA-DLMDAHMYAFNRSVLQEV 223 (365)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~v~~d~~---~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~-~l~~~giyi~s~~vl~~~ 223 (365)
.+..||++..+++ ...+..+.++++.+. .... +.+ .++++|+|+|++++|...
T Consensus 144 -----------~~t~yG~I~~~~~~~~~~~V~~f~EKp~~~~----a~~~--------~~~g~~~n~Giy~f~~~~ll~~ 200 (337)
T 2cu2_A 144 -----------PETEYGYIRLGPREGAWYRGEGFVEKPSYAE----ALEY--------IRKGYVWNGGVFAFAPATMAEL 200 (337)
T ss_dssp -----------CCSSSCEEEEEEEETTEEEEEEEECCCCHHH----HHHH--------HHTTCEEEEEEEEECHHHHHHH
T ss_pred -----------CCCCceEEEECCcccccCeEEEEEeCCChHH----HHHH--------hhcCCEEEEEEEEEeHHHHHHH
Confidence 2457899988754 123556664332111 0111 112 689999999999988444
Q ss_pred Hh
Q 017849 224 LD 225 (365)
Q Consensus 224 ~~ 225 (365)
++
T Consensus 201 l~ 202 (337)
T 2cu2_A 201 FR 202 (337)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 24
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=99.87 E-value=5e-21 Score=173.54 Aligned_cols=190 Identities=18% Similarity=0.214 Sum_probs=132.8
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceE
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~ 80 (365)
|++.|||||||.|+|| . +|+|+|++|||||+|+++++..+|+++|+|+++. +.+.+++..+ ++.
T Consensus 17 M~~~aIIlA~G~stRl----p---~K~L~~i~GkPmi~~~l~~l~~~~i~~IvV~t~~----~~i~~~~~~~-----g~~ 80 (264)
T 3k8d_A 17 MSFVVIIPARYASTRL----P---GKPLVDINGKPMIVHVLERARESGAERIIVATDH----EDVARAVEAA-----GGE 80 (264)
T ss_dssp -CCEEEEECCSCCSSS----T---TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC----HHHHHHHHHT-----TCE
T ss_pred CceEEEEEcCCCCCCC----C---CcceeeECCeEHHHHHHHHHHhCCCCEEEEECCH----HHHHHHHHHc-----CCE
Confidence 7889999999999999 3 5999999999999999999999999999999862 3667766542 455
Q ss_pred EEE--cCCCCChHHHHHHHHHHc---CCCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCC
Q 017849 81 VAT--VPEDVGTAGALRAIAHHL---TAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGA 153 (365)
Q Consensus 81 i~~--~~~~~gt~~al~~~~~~i---~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~ 153 (365)
++. ++...|++. +..+.+.+ ..+.++++.||. +....++.+++.|.+.+++++++..+.. ++.+++
T Consensus 81 v~~~~~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~--d~~~~~---- 153 (264)
T 3k8d_A 81 VCMTRADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIH--NAEEAF---- 153 (264)
T ss_dssp EEECCTTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECC--SHHHHT----
T ss_pred EEEecCCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcC--CHHHcc----
Confidence 554 345677776 67776666 346799999995 6677899999999888888888876653 222221
Q ss_pred ccCCCCCCcceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHHHh
Q 017849 154 KDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLD 225 (365)
Q Consensus 154 ~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~~~ 225 (365)
++... -|.+|++|+.+ .|.+ ++...+++...........+.+.++|+|+|++++|..+..
T Consensus 154 -----~p~~v-kVv~d~~g~~l-~fsr-----~~ip~~r~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~ 213 (264)
T 3k8d_A 154 -----NPNAV-KVVLDAEGYAL-YFSR-----ATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVN 213 (264)
T ss_dssp -----CTTSC-EEEECTTSBEE-EEES-----SCCSCCHHHHHHCSSCCCSCCEEECSEEEEEHHHHHHHHH
T ss_pred -----CCCce-EEEECCCCeEE-EEec-----CCCCCCCccccccccccCCcceEEEEEEEECHHHHHHHHh
Confidence 12222 35678888764 5543 3322122111000000123578999999999999988754
No 25
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=99.87 E-value=3.9e-21 Score=173.41 Aligned_cols=190 Identities=17% Similarity=0.236 Sum_probs=125.3
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceE
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~ 80 (365)
|++.|||||||.|+|| . ||+|+|++|||||+|+++.+..+|+++|+|+++. +.+.+++..+ ++.
T Consensus 8 M~~~aIIlA~G~stRl----~---~K~L~~i~GkPli~~~l~~l~~~~i~~VvVvt~~----~~i~~~~~~~-----g~~ 71 (256)
T 3tqd_A 8 MEFRVIIPARFDSTRL----P---GKALVDIAGKPMIQHVYESAIKSGAEEVVIATDD----KRIRQVAEDF-----GAV 71 (256)
T ss_dssp -CCEEEEECCCC---C----T---TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC----HHHHHHHHHT-----TCE
T ss_pred CCceEEEEcCCCCCCC----C---CCCeeeECCchHHHHHHHHHHhCCCCEEEEECCH----HHHHHHHHHc-----CCe
Confidence 6789999999999999 3 7999999999999999999999999999999863 3677777642 455
Q ss_pred EEEc--CCCCChHHHHHHHHHHc---CCCcEEEEeCCc--ccCCChHHHHHHHHhc-CCeEEEEEeeeccCCCccCCCCC
Q 017849 81 VATV--PEDVGTAGALRAIAHHL---TAKDVLVVSGDL--VSDVPPGAVTAAHRRH-DAVVTAMICSVPVSGLSEAGSSG 152 (365)
Q Consensus 81 i~~~--~~~~gt~~al~~~~~~i---~~~~~lv~~~D~--i~~~~l~~~l~~h~~~-~a~~t~l~~~~~~~~~~~~~~~~ 152 (365)
++.. +...|++. +..+.+.+ ..+.++++.||. +....++.+++.|++. +++++++..+.. ++.+..
T Consensus 72 v~~~~~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~--~~~~~~--- 145 (256)
T 3tqd_A 72 VCMTSSDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPIT--EVDELF--- 145 (256)
T ss_dssp EEECCTTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECC--CHHHHT---
T ss_pred EEEeCCCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcC--CHHHhh---
Confidence 5543 44577765 77777777 346799999995 5567899999999874 556666655432 122111
Q ss_pred CccCCCCCCcceEEEEcCCCcEEEEeeccccccccccccHHHHh-hcCcceeccCcccceeeeeCHHHHHHHHh
Q 017849 153 AKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILR-AVGQMDIRADLMDAHMYAFNRSVLQEVLD 225 (365)
Q Consensus 153 ~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~-~~~~~~~~~~l~~~giyi~s~~vl~~~~~ 225 (365)
++..+. |.+|++|+.+ ++.+ ++...++.... ........+.+.+.|+|+|++++|..+..
T Consensus 146 ------~p~~vk-vv~d~~g~~l-~fsr-----~pip~~r~~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~ 206 (256)
T 3tqd_A 146 ------NPHSTK-VVLNRRNYAL-YFSH-----APIPWGRDTFSDKENLQLNGSHYRHVGIYAYRVGFLEEYLS 206 (256)
T ss_dssp ------CTTSCE-EEECTTSBEE-EEES-----SCSSCCTTTTTCGGGCCCSSCCEEEEEEEEEEHHHHHHHHH
T ss_pred ------CCCccE-EEECCCCEEe-EEec-----CCCCCCCcccccccccccCCcceEEEEEEEcCHHHHHHHHh
Confidence 233333 5688888764 5543 22211110000 00000112578999999999999988754
No 26
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=99.83 E-value=1.5e-19 Score=161.07 Aligned_cols=178 Identities=18% Similarity=0.191 Sum_probs=120.1
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceE
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~ 80 (365)
|++.|||||||.|+|| . ||+|+|++|+|||+|+++++.++ +++|+|++++ +.+.+++..+ +.
T Consensus 1 m~~~aiIlA~G~g~R~----~---~K~l~~i~g~pli~~~l~~~~~~-~~~i~v~~~~----~~i~~~~~~~------~~ 62 (234)
T 2y6p_A 1 MRRAVIIPARLGSTRL----K---EKPLKNLLGKPLIRWVVEGLVKT-GERVILATDS----ERVKEVVEDL------CE 62 (234)
T ss_dssp -CEEEEEECCSCCTTT----T---TGGGCEETTEEHHHHHHHHHHTT-TSCEEEEESC----HHHHHHHTTT------SE
T ss_pred CceEEEEEcCCCCCCC----C---CCcceeECCEEHHHHHHHHHHHh-CCEEEEECCh----HHHHHHHHhc------eE
Confidence 8889999999999999 4 89999999999999999999999 9999999874 3566666532 34
Q ss_pred EEEc--CCCCChHHHHHHHHHHcCCCcEEEEeCCc-ccC-CChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCCccC
Q 017849 81 VATV--PEDVGTAGALRAIAHHLTAKDVLVVSGDL-VSD-VPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDK 156 (365)
Q Consensus 81 i~~~--~~~~gt~~al~~~~~~i~~~~~lv~~~D~-i~~-~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~ 156 (365)
++.. +...|++.++ .+++.+..+.+++++||. +.+ .++..+++.|.+.++.++++..... +
T Consensus 63 ~~~~~~~~~~g~~~~~-~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~-----~--------- 127 (234)
T 2y6p_A 63 VFLTPSDLPSGSDRVL-YVVRDLDVDLIINYQGDEPFVYEEDIKLIFRELEKGERVVTLARKDKE-----A--------- 127 (234)
T ss_dssp EEECCTTCCSHHHHHH-HHHTTCCCSEEEECCTTCCCCCHHHHHHHHHHHHHTCSEEEEEEECSG-----G---------
T ss_pred EEECCcccccchHHHH-HHHHhCCCCEEEEecCCcCcCCHHHHHHHHHHHHhCCCeEEEecCCHH-----H---------
Confidence 4443 2356777765 456666556799999997 555 7899999999877755555543110 0
Q ss_pred CCCCCcceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHHHh
Q 017849 157 TKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLD 225 (365)
Q Consensus 157 ~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~~~ 225 (365)
...+..+. +..+++|++ ..+.+ ++....++ .. .. ..+.++|+|+|+++.|..+..
T Consensus 128 ~~~~~~~~-~~~~~~g~v-~~~~e-----~~~~~~~~----~~--~~-~~~~~~giy~~~~~~l~~~~~ 182 (234)
T 2y6p_A 128 YERPEDVK-VVLDREGYA-LYFSR-----SPIPYFRK----ND--TF-YPLKHVGIYGFRKETLMEFGA 182 (234)
T ss_dssp GGCTTSCE-EEECTTSBE-EEEES-----SCCSCCSS----CC--SS-CCEEEEEEEEEEHHHHHHHHH
T ss_pred hcCCCceE-EEEcCCCCE-eeeec-----CCCCcccc----cc--cc-eeeEEEEEEEcCHHHHHHHHh
Confidence 00122333 345666654 55553 21100000 00 01 356799999999999877654
No 27
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=99.80 E-value=9.6e-19 Score=157.58 Aligned_cols=186 Identities=19% Similarity=0.207 Sum_probs=122.0
Q ss_pred ceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHH-HHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceEE
Q 017849 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVL-EQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (365)
Q Consensus 3 ~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L-~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i 81 (365)
+.|||||+|.|+|| . +|+|+|++|||||+|++ +.+..+++++|+|+++. +.+.+++.. .++.+
T Consensus 2 ~~aiIlA~G~stR~----~---~K~L~~i~GkPli~~~i~~~~~~~~~~~vvVvt~~----~~i~~~~~~-----~g~~v 65 (253)
T 4fcu_A 2 KHIVIPARFSSSRL----P---GKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDD----ERIAEICRA-----EGVDV 65 (253)
T ss_dssp EEEEEECCSCCTTS----T---TGGGSEETTEEHHHHHHHHHHTCTTCCEEEEEESC----HHHHHHHHT-----TTCCE
T ss_pred eEEEEEeCCCCCCC----C---CCceeeECCeEhHHHHHHHHHHhcCCCEEEEECCH----HHHHHHHHH-----cCCeE
Confidence 47999999999999 3 49999999999999999 99998999999999973 366666653 24445
Q ss_pred EE--cCCCCChHHHHHHHHHHcC---CCcEEEEeCCc--ccCCChHHHHHHHHhc-CCe-EEEEEeeeccCCCccCCCCC
Q 017849 82 AT--VPEDVGTAGALRAIAHHLT---AKDVLVVSGDL--VSDVPPGAVTAAHRRH-DAV-VTAMICSVPVSGLSEAGSSG 152 (365)
Q Consensus 82 ~~--~~~~~gt~~al~~~~~~i~---~~~~lv~~~D~--i~~~~l~~~l~~h~~~-~a~-~t~l~~~~~~~~~~~~~~~~ 152 (365)
+. .+...|+ +++..+++.+. .+.++++.||. +....+..+++.|.+. ++. +|++. ... ++.+
T Consensus 66 ~~~~~~~~~Gt-~~i~~a~~~~~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~at~~~-~~~--~~~~----- 136 (253)
T 4fcu_A 66 VLTSADHPSGT-DRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCE-PIH--ALDE----- 136 (253)
T ss_dssp EECCTTCCCHH-HHHHHHHHHHTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHCTTCSEEEEEE-ECC--CHHH-----
T ss_pred EEeCCCCCChH-HHHHHHHHhcCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeE-EcC--CHHH-----
Confidence 44 3345666 47777777664 36799999994 6667899999999876 334 44443 321 1101
Q ss_pred CccCCCCCCcceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHHH
Q 017849 153 AKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (365)
Q Consensus 153 ~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~~ 224 (365)
..+|..+ -|..|++|+.+ ++.++ +..-.+..............+.++|+|+|++++|..+.
T Consensus 137 ----~~~p~~~-kvv~d~~g~~l-~fsr~-----~ip~~r~~~~~~~~~~~~~~~~~~GiY~f~~~~l~~~~ 197 (253)
T 4fcu_A 137 ----FQRDSIV-KVVMSKQNEAL-YFSRA-----TIPYDRDGAKRDEPTLHTQAFRHLGLYAYRVSLLQEYV 197 (253)
T ss_dssp ----HHCTTSC-EEEECTTSBEE-EEESS-----CCSCCTTTSSSSSCCCCSCCEEEEEEEEEEHHHHHHHT
T ss_pred ----ccCCCcc-EEEECCCCeEE-EecCC-----CCCCCCCcccccccccccceeEEEEEEEeCHHHHHHHH
Confidence 0123343 46788888765 44422 11100000000000001246789999999999998875
No 28
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=99.80 E-value=4.9e-18 Score=154.02 Aligned_cols=188 Identities=16% Similarity=0.207 Sum_probs=122.7
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceE
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~ 80 (365)
|++.|||||||.|+|| . +|+|+|++|+|||+|+++++..+|+++|+|++++ +.+.+++.. .++.
T Consensus 1 m~~~aiIlA~G~g~R~----~---~K~l~~~~gkpli~~~l~~l~~~~~~~ivvv~~~----~~i~~~~~~-----~~~~ 64 (262)
T 1vic_A 1 MSFTVIIPARFASSRL----P---GKPLADIKGKPMIQHVFEKALQSGASRVIIATDN----ENVADVAKS-----FGAE 64 (262)
T ss_dssp -CCEEEEECCCCCSSS----T---TGGGCEETTEEHHHHHHHHHHHTTCSEEEEEESC----HHHHHHHHH-----TTCE
T ss_pred CCcEEEEEcCCCCCCC----C---CCccccCCCeEHHHHHHHHHHhCCCceEEEECCc----HHHHHHHHh-----cCCE
Confidence 8899999999999999 3 3999999999999999999999999999999874 246666653 2455
Q ss_pred EEEcC--CCCChHHHHHHHHHHcC---CCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCC
Q 017849 81 VATVP--EDVGTAGALRAIAHHLT---AKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGA 153 (365)
Q Consensus 81 i~~~~--~~~gt~~al~~~~~~i~---~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~ 153 (365)
++..+ ...|++ .+..+...+. .+.+++++||. +...++..+++.|.+.++++++++.+.. ++.+.
T Consensus 65 ~~~~~~~~~~g~~-~~~~~~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~--~~~~~----- 136 (262)
T 1vic_A 65 VCMTSVNHNSGTE-RLAEVVEKLAIPDNEIIVNIQGDEPLIPPVIVRQVADNLAKFNVNMASLAVKIH--DAEEL----- 136 (262)
T ss_dssp EEECCCSSCCHHH-HHHHHHHHTTCCTTCEEEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEEEEECC--CHHHH-----
T ss_pred EEECCccccCChH-HHHHHHHHhccCCCCEEEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEEEEecC--CHHHh-----
Confidence 55542 345665 4555555553 45699999995 5567899999999887777776665432 11110
Q ss_pred ccCCCCCCcceEEEEcCCCcEEEEeeccccccccccccHHHHh-----hcCcceeccCcccceeeeeCHHHHHHHH
Q 017849 154 KDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILR-----AVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (365)
Q Consensus 154 ~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~-----~~~~~~~~~~l~~~giyi~s~~vl~~~~ 224 (365)
....+..+..+++|+++ .+.+ +.....++. + +...-.+...+.++|+|+|++++|..+.
T Consensus 137 -----~~~~~~~~~~~~~g~v~-~f~~-----~~~~~~r~~-~~~~~~~~~~~~p~~~~~~~giy~~~~~~l~~~~ 200 (262)
T 1vic_A 137 -----FNPNAVKVLTDKDGYVL-YFSR-----SVIPYDRDQ-FMNLQDVQKVQLSDAYLRHIGIYAYRAGFIKQYV 200 (262)
T ss_dssp -----TCTTSCEEEECTTSBEE-EEES-----SCSSCCHHH-HTTCSCGGGCCCCTTCEEEEEEEEEEHHHHHHHH
T ss_pred -----cCCCceEEEECCCCCEe-eeec-----CCCCcCCcc-ccccccccccccccceEEEEEEEEeeHHHHHHHH
Confidence 01233445557667653 4432 211111111 0 0000012236789999999999887664
No 29
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=99.80 E-value=4.9e-18 Score=152.31 Aligned_cols=181 Identities=18% Similarity=0.229 Sum_probs=120.9
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCC-CeEEEEecCcchHHHHHHHHHhhhcCCcce
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNI-KDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi-~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v 79 (365)
|++.|||||||.|+|| . ||+|+|++|+|||+|+++.+..+|+ ++|+|++++ +.+.+++... ++
T Consensus 1 m~~~aiIlA~G~~~R~----~---~K~l~~i~g~pli~~~i~~~~~~~~~~~ivvv~~~----~~i~~~~~~~-----~~ 64 (245)
T 1h7e_A 1 SKAVIVIPARYGSSRL----P---GKPLLDIVGKPMIQHVYERALQVAGVAEVWVATDD----PRVEQAVQAF-----GG 64 (245)
T ss_dssp CCEEEEEECCSCCSSS----T---TGGGCEETTEEHHHHHHHHHHTCTTCCEEEEEESC----HHHHHHHHHT-----TC
T ss_pred CCeEEEEEcCCcCCCC----C---CCcccccCCchHHHHHHHHHHhCCCCCeEEEECCc----HHHHHHHHHc-----CC
Confidence 8899999999999999 3 8999999999999999999999996 999999974 3566666542 45
Q ss_pred EEEEc--CCCCChHHHHHHHHHHcCCCcEEEEeCCc--ccCCChHHHHHHHHhc-CCeEEEEEeeeccCCCccCCCCCCc
Q 017849 80 EVATV--PEDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAAHRRH-DAVVTAMICSVPVSGLSEAGSSGAK 154 (365)
Q Consensus 80 ~i~~~--~~~~gt~~al~~~~~~i~~~~~lv~~~D~--i~~~~l~~~l~~h~~~-~a~~t~l~~~~~~~~~~~~~~~~~~ 154 (365)
.++.. +...|+++++ .+...+..+.+++++||. +...++..+++.|.+. ++++++++.+.. +.+.
T Consensus 65 ~~~~~~~~~~~g~~~~~-~~~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~---~~~~------ 134 (245)
T 1h7e_A 65 KAIMTRNDHESGTDRLV-EVMHKVEADIYINLQGDEPMIRPRDVETLLQGMRDDPALPVATLCHAIS---AAEA------ 134 (245)
T ss_dssp EEEECCSCCSSHHHHHH-HHHHHSCCSEEEECCTTCTTCCHHHHHHHHHHHHHCTTCCEEEEEEEEC---HHHH------
T ss_pred eEEeCCCccCCcHHHHH-HHHHhCCCCEEEEEcCCcCcCCHHHHHHHHHHHHhCCCCCEEEEeecCC---HHHh------
Confidence 56553 3346776554 455555556799999995 4566799999999887 777776655431 1100
Q ss_pred cCCCCCCcceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHHH
Q 017849 155 DKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (365)
Q Consensus 155 ~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~~ 224 (365)
..+.. ..+..+++|++ ..+.++ .....++ . ...+.+.++|+|+|+++.|..+.
T Consensus 135 ---~~~~~-~~~~~~~~g~~-~~~~~~-----~~~~~r~----~---~~~~~~~~~g~y~~~~~~l~~~~ 187 (245)
T 1h7e_A 135 ---AEPST-VKVVVNTRQDA-LYFSRS-----PIPYPRN----A---EKARYLKHVGIYAYRRDVLQNYS 187 (245)
T ss_dssp ---TCTTS-CEEEECTTCBE-EEEESS-----CSSCCTT----G---GGCCEEEEEEEEEEEHHHHHHGG
T ss_pred ---cCCCC-cEEEECCCCcE-EEeecC-----CCCCCcc----c---ccCceeEEEEEEEcCHHHHHHHH
Confidence 01111 12233555654 444421 1100000 0 01125679999999999886654
No 30
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=99.76 E-value=2.3e-17 Score=146.83 Aligned_cols=168 Identities=15% Similarity=0.193 Sum_probs=106.7
Q ss_pred cceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceEE
Q 017849 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (365)
Q Consensus 2 ~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i 81 (365)
++.|||||||.|+||+|+ ||+|+|++|+|||+|+++++..+ +++|+|++ +.. +.+.+++...+ ..++.+
T Consensus 18 ~~~~iIlA~G~g~R~~~~-----~K~l~~i~g~pli~~~l~~l~~~-~~~i~vv~-~~~--~~~~~~~~~~~--~~~~~~ 86 (232)
T 2xme_A 18 LMKAVILAAGLGTRLGGV-----PKPLVRVGGCEIILRTMKLLSPH-VSEFIIVA-SRY--ADDIDAFLKDK--GFNYKI 86 (232)
T ss_dssp CEEEEEEECC------CC-----CGGGCEETTEEHHHHHHHHHGGG-EEEEEEEE-STT--HHHHHHHHTTS--CCCEEE
T ss_pred cceEEEECCcCcCcCCCC-----CcEEeEECCEEHHHHHHHHHHHh-CCEEEEEe-CCh--HHHHHHHHHhc--CCcEEE
Confidence 578999999999999654 89999999999999999999998 99999998 442 35555543221 124666
Q ss_pred EEcCCC-CChHHHHHHHHHHcCCCcEEEEeCCcccCCChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCCccCCCCC
Q 017849 82 ATVPED-VGTAGALRAIAHHLTAKDVLVVSGDLVSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKP 160 (365)
Q Consensus 82 ~~~~~~-~gt~~al~~~~~~i~~~~~lv~~~D~i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~ 160 (365)
+..+.. .|++++++.+++.+. +++++++||..++.+ +++...+.. . +++...... ..+
T Consensus 87 v~~~~~~~g~~~~i~~a~~~~~-~~~lv~~~D~p~~~~---~~~~l~~~~-~-~~~~~~~~~---------------~~~ 145 (232)
T 2xme_A 87 VRHDRPEKGNGYSLLVAKNHVE-DRFILTMGDHVYSQQ---FIEKAVRGE-G-VIADREPRF---------------VDI 145 (232)
T ss_dssp EECSCGGGCHHHHHHTTGGGCC-SSEEEEETTEEECHH---HHHHHTTCC-E-EEEESSCSS---------------SCT
T ss_pred EECCCCCCCcHHHHHHHHHHCC-CCEEEEcCCcccCHH---HHHHHHhCC-C-cEEEccccc---------------cCC
Confidence 665543 799999999988885 679999999876433 223322221 1 222211100 012
Q ss_pred CcceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHH
Q 017849 161 GRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEV 223 (365)
Q Consensus 161 ~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~ 223 (365)
..++.+..+ +|+ +..+.+ +. ...+++++|+|++++++|..+
T Consensus 146 ~~~~~v~~~-~g~-v~~~~~-----~~---------------~~~~~~~~g~~~~~~~~~~~l 186 (232)
T 2xme_A 146 GEATKIRVE-DGR-VAKIGK-----DL---------------REFDCVDTGFFVLDDSIFEHA 186 (232)
T ss_dssp TTSCEEEEE-TTE-EEEEET-----TC---------------SSCSEEEEEEEEECTTHHHHH
T ss_pred CcceEEEEc-CCE-EEEeec-----CC---------------CCcceEEEEEEEECHHHHHHH
Confidence 345556665 454 445542 21 123567899999999998754
No 31
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=99.74 E-value=2.8e-17 Score=147.69 Aligned_cols=129 Identities=14% Similarity=0.160 Sum_probs=93.2
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCC-CCeEEEEecCcchHHHHHHHHHhhhcCCcce
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~g-i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v 79 (365)
|++.|||||||.|+||.+ ..+||+|+|++|||||+|+|+++.+++ +++|+|+++.... +.+.+.+..+..+ ..+
T Consensus 2 ~~~~aIIlAaG~g~Rm~~---~~~pK~l~~l~Gkpll~~~l~~~~~~~~~~~ivvv~~~~~~-~~~~~~~~~~~~~-~~~ 76 (246)
T 3f1c_A 2 SLIYAQILAGGKGTRMGN---VSMPKQFLPLNGKPIIVHTVEKFILNTRFDKILISSPKEWM-NHAEDNIKKYISD-DRI 76 (246)
T ss_dssp CCEEEEEECC-----C-C---SSCCGGGSEETTEEHHHHHHHHHHTCTTCSEEEEEECGGGH-HHHHHHHHHHCCC-TTE
T ss_pred CccEEEEECCccccccCC---CCCCCeEEEECCeeHHHHHHHHHHcCCCCCEEEEEeCHHHH-HHHHHHHHHhCCC-CCE
Confidence 346899999999999953 278999999999999999999999998 9999999986532 2345555543221 234
Q ss_pred EEEEcCCCCChHHHHHHHHHHcC-------CCcEEEEeCC--cccCCChHHHHHHHHhcCCeEEEE
Q 017849 80 EVATVPEDVGTAGALRAIAHHLT-------AKDVLVVSGD--LVSDVPPGAVTAAHRRHDAVVTAM 136 (365)
Q Consensus 80 ~i~~~~~~~gt~~al~~~~~~i~-------~~~~lv~~~D--~i~~~~l~~~l~~h~~~~a~~t~l 136 (365)
.++ ....+..++++.+++.+. .+.++++.|| ++....+..+++.+.+.++.++++
T Consensus 77 ~~~--~~~~~~~~sv~~al~~l~~~~~~~~~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a~i~~~ 140 (246)
T 3f1c_A 77 VVI--EGGEDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGAVDTVI 140 (246)
T ss_dssp EEE--ECCSSHHHHHHHHHHHHHHHTCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHTSEEEEEE
T ss_pred EEE--CCCCchHHHHHHHHHHHhhhhcCCCCCEEEEecCcccCCCHHHHHHHHHHHHhcCCEEEEE
Confidence 443 345677888888877664 3569999999 577778999999999887766654
No 32
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=99.74 E-value=4.3e-17 Score=145.12 Aligned_cols=124 Identities=18% Similarity=0.253 Sum_probs=83.8
Q ss_pred ceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhC-CCCeEEEEecCcchHHHHHHHHHhhhcCCcceEE
Q 017849 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELS-NIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (365)
Q Consensus 3 ~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~-gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i 81 (365)
+.|||||||.|+||++ ..+||+|+|++|+|||+|+++++.++ ++++|+|++++... +.+.+++..+. -......
T Consensus 3 ~~~iIlA~G~g~R~~~---~~~~K~l~~i~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~-~~~~~~~~~~~-~~~~~~~ 77 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGI---SNLPKQFLELGDRPILIHTIEKFVLEPSIEKIVVGVHGDWV-SHAEDLVDKYL-PLYKERI 77 (236)
T ss_dssp EEEEEEEC--------------CGGGSEETTEEHHHHHHHHHHTCTTCCCEEEEECGGGH-HHHHHHHHHHC-GGGGGGE
T ss_pred eEEEEeCCccccccCC---CCCCCeeeeeCCccHHHHHHHHHHcCCCCCeEEEEeCHHHH-HHHHHHHHhcc-ccccCce
Confidence 6899999999999965 36899999999999999999999998 49999999986532 34666665431 0011111
Q ss_pred EEcCCCCChHHHHHHHHHHc----C--C-CcEEEEeCCc--ccCCChHHHHHHHHhcCC
Q 017849 82 ATVPEDVGTAGALRAIAHHL----T--A-KDVLVVSGDL--VSDVPPGAVTAAHRRHDA 131 (365)
Q Consensus 82 ~~~~~~~gt~~al~~~~~~i----~--~-~~~lv~~~D~--i~~~~l~~~l~~h~~~~a 131 (365)
.......|+.++++.++..+ . . +.+++++||. +...++..+++.|.+.++
T Consensus 78 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~ 136 (236)
T 2vsh_A 78 IITKGGADRNTSIKNIIEAIDAYRPLTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA 136 (236)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHHSCCCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE
T ss_pred EEECCCCchHHHHHHHHHHHHhhccCCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc
Confidence 12233467889999888776 2 3 5688899996 556689999999987665
No 33
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=99.71 E-value=3.2e-17 Score=145.45 Aligned_cols=123 Identities=15% Similarity=0.117 Sum_probs=93.6
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCC-CCeEEEEecCcchHHHHHHHHHhhhcCCcce
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~g-i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v 79 (365)
|++.|||||||.|+|| . ||+|+|++|+|||+|+++.+..++ +++|+|+++. +.+.+++..+ ++
T Consensus 3 m~~~aiIlA~G~g~R~----~---~K~l~~i~gkpll~~~l~~~~~~~~~~~ivvv~~~----~~i~~~~~~~-----~~ 66 (228)
T 1ezi_A 3 KQNIAVILARQNSKGL----P---LKNLRKMNGISLLGHTINAAISSKCFDRIIVSTDG----GLIAEEAKNF-----GV 66 (228)
T ss_dssp CEEEEEEECCSSCSSS----T---TTTTCEETTEEHHHHHHHHHHHHCCCSEEEEEESC----HHHHHHHHHT-----TC
T ss_pred CceEEEEecCCCCCCC----C---CcccceeCCcCHHHHHHHHHHhCCCCCEEEEECCC----HHHHHHHHHc-----CC
Confidence 4456999999999999 4 899999999999999999999988 7999999973 2455555432 34
Q ss_pred EEEEcC-----CCCChHHHHHHHHHHcC--CCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEee
Q 017849 80 EVATVP-----EDVGTAGALRAIAHHLT--AKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICS 139 (365)
Q Consensus 80 ~i~~~~-----~~~gt~~al~~~~~~i~--~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~~ 139 (365)
.++..+ ...|++++++.+++.+. .+.+++++||. +...+++.+++.|.+.++++++...+
T Consensus 67 ~~~~~~~~~~~~~~g~~~sv~~~l~~~~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~~~ 135 (228)
T 1ezi_A 67 EVVLRPAELASDTASSISGVIHALETIGSNSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVSACP 135 (228)
T ss_dssp EEEECCC------CHHHHHHHHHHHHHTCCSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEEEEE
T ss_pred EEEeCchHHcCCCCChHHHHHHHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEEEEe
Confidence 443332 34677899999988774 25699999995 55667899998887777676665554
No 34
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=99.70 E-value=2.9e-16 Score=138.56 Aligned_cols=124 Identities=20% Similarity=0.168 Sum_probs=92.0
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCC-CCeEEEEecCcchHHHHHHHHHhhhcCCcce
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~g-i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v 79 (365)
|++.|||||||.|+||+ ..+||+|+|++|+|||+|+++.+..++ +++|+|++++... +.+.+++. ..++
T Consensus 1 m~~~~vIlA~G~g~R~~----~~~~K~l~~~~g~pli~~~l~~l~~~~~~~~i~vv~~~~~~-~~~~~~~~-----~~~v 70 (223)
T 2xwl_A 1 MATVAVVPAAGSGERLR----AGRPKAFVTLGGTPLLEHALSGLRASGVIDRIVIAVPPALT-DESKLVFG-----GEDS 70 (223)
T ss_dssp -CEEEEEECCCCCGGGT----SSSCGGGSEETTEEHHHHHHHHHHHHSCCSEEEEEECGGGH-HHHHHHTC-----BTTE
T ss_pred CceEEEEECCccCcccC----CCCCCeeeEECCeEHHHHHHHHHhcCCCCCeEEEEEcccHH-HHHHHHhc-----cCCe
Confidence 88999999999999993 458999999999999999999999988 9999999986531 23443332 1245
Q ss_pred EEEEcCCCCChHHHHHHHHHHc-CCCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEE
Q 017849 80 EVATVPEDVGTAGALRAIAHHL-TAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMI 137 (365)
Q Consensus 80 ~i~~~~~~~gt~~al~~~~~~i-~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~ 137 (365)
.++. +..+.+++++.+++.+ ..+.+++++||. +...++..+++.|. .+.++++.+
T Consensus 71 ~~~~--~~~~~~~~i~~al~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~-~~~~~~i~~ 128 (223)
T 2xwl_A 71 VIVS--GGVDRTESVALALEAAGDAEFVLVHDAARALTPPALIARVVAALK-EGHSAVVPG 128 (223)
T ss_dssp EEEE--CCSSHHHHHHHHHTTCTTCSEEEECCTTCTTCCHHHHHHHHHHHH-HTCSEEEEE
T ss_pred EEEc--CCCCHHHHHHHHHHhcCCCCEEEEEcCCcccCCHHHHHHHHHHHh-hcCCeEEEE
Confidence 5443 3356789999998887 445688889995 45567899999883 233445443
No 35
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=99.68 E-value=2.6e-16 Score=139.41 Aligned_cols=120 Identities=17% Similarity=0.237 Sum_probs=85.9
Q ss_pred cceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhC-CCCeEEEEecCcchHHHHHHHHHhhhcCCcceE
Q 017849 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELS-NIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (365)
Q Consensus 2 ~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~-gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~ 80 (365)
++.|||||||.|+|| ...+||+|+|++|+|||+|+++.+..+ ++++|+|++++.. +.+.+++...+ ..++.
T Consensus 4 ~~~aiIlAaG~g~R~----~~~~~K~l~~i~g~pli~~~l~~l~~~~~~~~ivvv~~~~~--~~~~~~~~~~~--~~~v~ 75 (228)
T 2yc3_A 4 SVSVILLAGGQGKRM----KMSMPKQYIPLLGQPIALYSFFTFSRMPEVKEIVVVCDPFF--RDIFEEYEESI--DVDLS 75 (228)
T ss_dssp CEEEEEECCCCC-----------CGGGSEETTEEHHHHHHHHHHHCTTEEEEEEECCGGG--HHHHHTTTTTS--SSEEE
T ss_pred ceEEEEECCcccccc----CCCCCccEeEECCEEHHHHHHHHHHcCCCCCeEEEEEChHH--HHHHHHHHHhC--CCcEE
Confidence 578999999999999 446899999999999999999999998 7999999998653 23444333211 12343
Q ss_pred EEEcCCCCChHHHHHHHHHHcCC--CcEEEEeCC--cccCCChHHHHHHHHhcCC
Q 017849 81 VATVPEDVGTAGALRAIAHHLTA--KDVLVVSGD--LVSDVPPGAVTAAHRRHDA 131 (365)
Q Consensus 81 i~~~~~~~gt~~al~~~~~~i~~--~~~lv~~~D--~i~~~~l~~~l~~h~~~~a 131 (365)
++ ....|..++++.+++.+.. +.++++.|| ++...+++.+++.|.+.++
T Consensus 76 ~~--~~~~~~~~sv~~al~~~~~~~~~vl~~d~d~P~~~~~~i~~l~~~~~~~~~ 128 (228)
T 2yc3_A 76 FA--IPGKERQDSVYSGLQEIDVNSELVCIHDSARPLVNTEDVEKVLKDGSAVGA 128 (228)
T ss_dssp EE--CCCSSHHHHHHHHHTTSCTTCSEEEEEETTCTTCCHHHHHHHHHHHHHHSE
T ss_pred EE--CCCCCHHHHHHHHHHhhccCCCEEEEecCCCccCCHHHHHHHHHHHHhcCc
Confidence 33 3347888999999888753 457888898 4556679999999877654
No 36
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=99.66 E-value=1.7e-15 Score=146.82 Aligned_cols=193 Identities=12% Similarity=0.112 Sum_probs=128.9
Q ss_pred cceEEEEcCCCCCCCCCCCCCCCCceeceeC-CcchHHHHHHHHHhC----CCC-eEEEEecCcchHHHHHHHHHhhhcC
Q 017849 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVA-NRPVLSYVLEQLELS----NIK-DLIVVVEGADAALRVGGWISAAYVD 75 (365)
Q Consensus 2 ~~~avIlA~G~g~rl~pL~t~~~pK~llpv~-gkplI~~~L~~l~~~----gi~-~v~vv~~~~~~~~~i~~~~~~~~~~ 75 (365)
++.+||||||.|||| +...||+|+||. |+|+|++.++++... |+. .++|.+++.. .+.+.+++++...-
T Consensus 79 k~~vviLAGGlGTRL----g~~~PK~llpv~~gkp~Le~~i~~l~~~~~~~G~~ip~vimts~~t-~e~t~~~f~~~~~f 153 (469)
T 2icy_A 79 KLVVLKLNGGLGTTM----GCTGPKSVIEVRDGLTFLDLIVIQIENLNNKYGCKVPLVLMNSFNT-HDDTHKIVEKYTNS 153 (469)
T ss_dssp TEEEEEEECCBSGGG----TCCSBGGGSEEETTEEHHHHHHHHHHHHHHHHSCCCCEEEEECTTT-HHHHHHHHGGGTTS
T ss_pred cceEEEEcCCccccC----CCCCCccccccCCCCCHHHHHHHHHHHHHHhcCCCccEEEEeCCCC-HHHHHHHHHhcccC
Confidence 468999999999999 778999999998 999999999999877 532 4555555432 45888888753110
Q ss_pred CcceEEEEc------------------------CCCCChHHHHHHH-----HHH-cC--CCcEEEEeCCcccCCChHHHH
Q 017849 76 RLHVEVATV------------------------PEDVGTAGALRAI-----AHH-LT--AKDVLVVSGDLVSDVPPGAVT 123 (365)
Q Consensus 76 ~~~v~i~~~------------------------~~~~gt~~al~~~-----~~~-i~--~~~~lv~~~D~i~~~~l~~~l 123 (365)
...+.++.+ ..+.|+|++++.. ++. +. .++++|.++|.+.......++
T Consensus 154 G~~I~~f~Q~~~P~i~~e~~~~l~~~~~~~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~~~d~~ll 233 (469)
T 2icy_A 154 NVDIHTFNQSKYPRVVADEFVPWPSKGKTDKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLTIL 233 (469)
T ss_dssp SSCEEEEECCCEECEETTTTEEGGGGTCCSGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTCCCCHHHH
T ss_pred CceEEEEEecceeeEccccCccccCCCCCccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCcccCHHHH
Confidence 223444322 1468999988754 222 32 478999999998865434789
Q ss_pred HHHHhcCCeEEEEEeeeccCCCccCCCCCCccCCCCCCcceEEEEcCCCc-EEEEeeccccccccccccHHHHhhcCcce
Q 017849 124 AAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQ-FLLHIATGAELEKDTRIRKSILRAVGQMD 202 (365)
Q Consensus 124 ~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~-~l~~~~~~~~~ek~~~i~~~~l~~~~~~~ 202 (365)
..|.++++++|+.+++... | ...+|++... +++ .++.+.+.+. .. .+.++. .
T Consensus 234 ~~~~~~~a~~t~~v~~k~~--~--------------~~~~Gvl~~~-dg~~~vvE~~e~p~-----~~-~~e~k~----~ 286 (469)
T 2icy_A 234 KHLIQNKNEYCMEVTPKTL--A--------------DVKGGTLISY-EGKVQLLEIAQVPD-----EH-VNEFKS----I 286 (469)
T ss_dssp HHHHHHTCSEEEEEEECCT--T--------------CCSSCEEEEE-TTEEEEECGGGSCG-----GG-HHHHHS----S
T ss_pred HHHHHcCCCeeEEEEEecc--C--------------CCceeEEEEE-CCEEEEEEEeccCh-----hh-hhhhcc----c
Confidence 9999999999998776431 1 2357877753 243 2233322111 00 000111 1
Q ss_pred eccCcccceeeeeCHHHHHHHHhc
Q 017849 203 IRADLMDAHMYAFNRSVLQEVLDQ 226 (365)
Q Consensus 203 ~~~~l~~~giyi~s~~vl~~~~~~ 226 (365)
...++.++|+|+|++++|..+.++
T Consensus 287 ~~~~~~N~g~y~~~~~~L~~i~~~ 310 (469)
T 2icy_A 287 EKFKIFNTNNLWVNLKAIKKLVEA 310 (469)
T ss_dssp SSCCEEEEEEEEEEHHHHHHHHHT
T ss_pred cccceeeEEEEEEcHHHHHHHHhc
Confidence 233677999999999999988764
No 37
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=99.65 E-value=1.1e-16 Score=138.57 Aligned_cols=127 Identities=20% Similarity=0.320 Sum_probs=89.4
Q ss_pred ceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceEEE
Q 017849 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVA 82 (365)
Q Consensus 3 ~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i~ 82 (365)
|+|||||||.|+||.| +||+|+|++|+|||+|+++++..+++++|+|++++.. +.+.+++...+....++.++
T Consensus 1 m~aiIlA~G~s~R~~~-----~~K~l~~~~g~pli~~~l~~l~~~~~~~v~vv~~~~~--~~i~~~~~~~~~~~~~~~~~ 73 (196)
T 3rsb_A 1 MDALIMAGGKGTRMGG-----VEKPLIKLCGRCLIDYVVSPLLKSKVNNIFIATSPNT--PKTKEYINSAYKDYKNIVVI 73 (196)
T ss_dssp CEEEEEC----CGGGG-----SCGGGCEETTEEHHHHHHHHHHSSSCCCEEEECCTTC--HHHHHHHHHHTTTTTEEEE-
T ss_pred CEEEEECCCCCCcCCC-----CCccEEEECCEEHHHHHHHHHHHCCCCEEEEEeCCCh--HHHHHHHHhhccCCCCEEEE
Confidence 5799999999999943 7999999999999999999999999999999998653 46777776532211134443
Q ss_pred EcCCCCChHHHHHHHHHHcCCCcEEEEeCCc--ccCCChHHHHHHHHh-----cCCeEEEEEe
Q 017849 83 TVPEDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAAHRR-----HDAVVTAMIC 138 (365)
Q Consensus 83 ~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~--i~~~~l~~~l~~h~~-----~~a~~t~l~~ 138 (365)
.+...|++++++.+++.+ .+.++++.||. +....+..+++.|.+ .+.+..+++.
T Consensus 74 -~~~~~g~~~si~~al~~~-~~~vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~~~~ 134 (196)
T 3rsb_A 74 -DTSGKGYIEDLNECIGYF-SEPFLVVSSDLINLKSKIINSIVDYFYCIKAKTPDVEALAVMI 134 (196)
T ss_dssp --------CCCCCTTTTTC-SSCEEEEETTEESCCHHHHHHHHHHHHHHHTTCC--CEEEEEE
T ss_pred -ECCCCCcHHHHHHHHHhC-CCCEEEEeCCcccCCHHHHHHHHHHHHhhhcccCCCceEEEEE
Confidence 344577888888887777 67899999996 667789999999986 5555544443
No 38
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=99.65 E-value=6.5e-16 Score=133.53 Aligned_cols=118 Identities=26% Similarity=0.363 Sum_probs=90.6
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceE
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~ 80 (365)
|++.+||||||.|+|| +.||+|+|++|+|||+|+++.+..+++++|+|++++. .+.+.+++.. .++.
T Consensus 4 ~~~~~iIlA~G~~~R~------g~~K~l~~~~g~pll~~~l~~l~~~~~~~i~vv~~~~--~~~~~~~~~~-----~~~~ 70 (197)
T 2wee_A 4 TQITGVVLAAGRSNRL------GTPKQLLPYRDTTVLGATLDVARQAGFDQLILTLGGA--ASAVRAAMAL-----DGTD 70 (197)
T ss_dssp SEEEEEEEECCCCTTT------SSCGGGSEETTEEHHHHHHHHHHHTTCSEEEEEECTT--HHHHHHHSCC-----TTSE
T ss_pred CceEEEEECCCCcccC------CCCeEcCeeCCccHHHHHHHHHHhcCCCcEEEEeCCC--HHHHHHHhcc-----CCCE
Confidence 5678999999999999 3799999999999999999999999999999999865 2355555432 2456
Q ss_pred EEEcC-CCCChHHHHHHHHHHcC--CCcEEEEeCCc--ccCCChHHHHHHHHhcCCeE
Q 017849 81 VATVP-EDVGTAGALRAIAHHLT--AKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVV 133 (365)
Q Consensus 81 i~~~~-~~~gt~~al~~~~~~i~--~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~ 133 (365)
++..+ ...|++++++.+++.+. .+.+++++||. +....++.+++. +.++++
T Consensus 71 ~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~i 126 (197)
T 2wee_A 71 VVVVEDVERGCAASLRVALARVHPRATGIVLMLGDQPQVAPATLRRIIDV--GPATEI 126 (197)
T ss_dssp EEECC----CCHHHHHHHHTTSCTTEEEEEEEETTCTTCCHHHHHHHHHH--GGGSSE
T ss_pred EEECCCcccCHHHHHHHHHHHhcccCCeEEEEeCCcCCCCHHHHHHHHhh--cCCCCE
Confidence 66543 34799999999998873 35699999996 445678888877 344444
No 39
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=99.64 E-value=9.9e-16 Score=132.53 Aligned_cols=119 Identities=24% Similarity=0.372 Sum_probs=92.6
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceE
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~ 80 (365)
|++.|||||||.|+|| . .||+|+|++|+|||+|+++.+..+++++|+|++++.. +.+.+++.. .++.
T Consensus 4 ~~~~~iIlA~G~~~R~----g--~~K~l~~~~g~pli~~~l~~l~~~~~~~i~vv~~~~~--~~~~~~~~~-----~~~~ 70 (199)
T 2waw_A 4 SRVTGVVLAAGYSRRL----G--TPKQLLPLGDTTLLGATLAMARRCPFDQLIVTLGGAA--DEVLEKVEL-----DGLD 70 (199)
T ss_dssp CCEEEEEEESSCCTTT----T--SCGGGCEETTEEHHHHHHHHHHTSSCSEEEEEECTTH--HHHHHHSCC-----TTSE
T ss_pred CceEEEEECCCCCCCC----C--CCEEeCEeCccCHHHHHHHHHHhCCCCcEEEEeCCCH--HHHHHHhcc-----CCCE
Confidence 4578999999999999 3 7999999999999999999999999999999998652 355555432 2455
Q ss_pred EEEcC-CCCChHHHHHHHHHHc--CCCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEE
Q 017849 81 VATVP-EDVGTAGALRAIAHHL--TAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVT 134 (365)
Q Consensus 81 i~~~~-~~~gt~~al~~~~~~i--~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t 134 (365)
++..+ ...|++++++.+++.+ ..+.+++++||. +...++..+++. +.+++++
T Consensus 71 ~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv~~~D~P~~~~~~i~~l~~~--~~~~~~~ 127 (199)
T 2waw_A 71 IVLVDDAGLGCSSSLKSALTWVDPTAEGIVLMLGDQPGITASAVASLIAG--GRGATIA 127 (199)
T ss_dssp EEECCCCCTTCCCHHHHHHHTSCTTCSEEEEEETTCTTCCHHHHHHHHHH--HTTCSEE
T ss_pred EEECCCcccCHHHHHHHHHHhhhccCCeEEEEeCCcccCCHHHHHHHHhh--cCCCCEE
Confidence 65533 3578889999998887 346799999996 446678888877 4455443
No 40
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=99.64 E-value=2.5e-15 Score=146.37 Aligned_cols=193 Identities=12% Similarity=0.134 Sum_probs=128.1
Q ss_pred cceEEEEcCCCCCCCCCCCCCCCCceeceeC-CcchHHHHHHHHHhC----CCC-eEEEEecCcchHHHHHHHHHhhhcC
Q 017849 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVA-NRPVLSYVLEQLELS----NIK-DLIVVVEGADAALRVGGWISAAYVD 75 (365)
Q Consensus 2 ~~~avIlA~G~g~rl~pL~t~~~pK~llpv~-gkplI~~~L~~l~~~----gi~-~v~vv~~~~~~~~~i~~~~~~~~~~ 75 (365)
++.+||||||.|||| ....||+|+||+ |||||+++++.+... |+. .++|+++.+. .+.+.+++++...-
T Consensus 92 k~avViLAGG~GTRm----gs~~PK~l~~V~~gk~~Le~~i~~i~~l~~~~G~~Ip~vImts~~t-~e~t~~~~~~~~~f 166 (488)
T 2i5k_A 92 KLAVLKLNGGLGTSM----GCVGPKSVIEVREGNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFNT-DKDTEHLIKKYSAN 166 (488)
T ss_dssp GEEEEEECCCBSGGG----TCCSBSTTSCCBTTBCHHHHHHHHHHHHHHHHTCCCEEEEECCTTT-HHHHHHHHGGGCSS
T ss_pred CceEEEEcCCCcccC----CCCCCccccccCCCCcHHHHHHHHHHHhHHhcCCCccEEEEECCCC-HHHHHHHHHhcccc
Confidence 456799999999999 678999999999 999999999999776 532 3666666333 45788888753111
Q ss_pred CcceEEEEcC------------------------CCCChHHHHHHH-----HHHc---CCCcEEEEeCCcccC-CChHHH
Q 017849 76 RLHVEVATVP------------------------EDVGTAGALRAI-----AHHL---TAKDVLVVSGDLVSD-VPPGAV 122 (365)
Q Consensus 76 ~~~v~i~~~~------------------------~~~gt~~al~~~-----~~~i---~~~~~lv~~~D~i~~-~~l~~~ 122 (365)
...+.++.|. .+.|+|+++... ++.+ ..++++|+++|.+.. .|+. +
T Consensus 167 g~~i~~f~Q~~~P~i~~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDnL~~~~d~~-~ 245 (488)
T 2i5k_A 167 RIRIRSFNQSRFPRVYKDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLK-I 245 (488)
T ss_dssp SCEEEEECCCCEECEETTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTBSSCCCCHH-H
T ss_pred CceEEEEEeCccceEccccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCcCCCcccHH-H
Confidence 1234444344 468999988743 3444 257899999998664 5786 6
Q ss_pred HHHHHhcCCeEEEEEeeeccCCCccCCCCCCccCCCCCCcceEEEEcCCCcEEEEeeccccccccccccHHHHhhcCcce
Q 017849 123 TAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRKSILRAVGQMD 202 (365)
Q Consensus 123 l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~~~l~~~~~~~ 202 (365)
+..|...++++++.+.+... | ...||.+..+ +|+ ..+.+-.+..+.. ...+.. .
T Consensus 246 L~~~~~~~a~~t~~v~~~~~--p--------------~~~yG~Iv~~-dG~--~~iVE~~e~~~e~---~~~~~~----~ 299 (488)
T 2i5k_A 246 LNHMIETGAEYIMELTDKTR--A--------------DVKGGTLISY-DGQ--VRLLEVAQVPKEH---IDEFKN----I 299 (488)
T ss_dssp HHHHHHSCCSEEEEEEECCG--G--------------GSSSCEEEEE-TTE--EEEECGGGSCTTS---HHHHTC----T
T ss_pred HHHHHhcCCcEEEEEEEecC--C--------------CCceeEEEEE-CCc--EEEEEeccCCHHH---Hhhccc----c
Confidence 68898999999998775431 1 1247877665 354 2333311111100 010111 1
Q ss_pred eccCcccceeeeeCHHHHHHHHhc
Q 017849 203 IRADLMDAHMYAFNRSVLQEVLDQ 226 (365)
Q Consensus 203 ~~~~l~~~giyi~s~~vl~~~~~~ 226 (365)
......|+|+|+|+.+.|..++.+
T Consensus 300 ~~~~~~Ntgi~~f~~~~L~~~l~~ 323 (488)
T 2i5k_A 300 RKFTNFNTNNLWINLKAVKRLIES 323 (488)
T ss_dssp TTCCEEEEEEEEEEHHHHHHHHHT
T ss_pred cccCEEEEEEEEEeHHHHHHHHhh
Confidence 123567999999999999988765
No 41
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=99.59 E-value=2e-15 Score=134.23 Aligned_cols=118 Identities=25% Similarity=0.330 Sum_probs=93.3
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceE
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~ 80 (365)
|++.|||||||. |||.+. +...||+|+|++|+|||+|+++.+..+++ +|+|++.. + .+.+++ ++.
T Consensus 1 m~~~~vIlAaG~-tRl~~r-~~~~~K~l~~i~g~pll~~~l~~l~~~~~-~ivvv~~~-~---~i~~~~--------~~~ 65 (232)
T 2dpw_A 1 MRPSAIVLAGGK-EAWAER-FGVGSKALVPYRGRPMVEWVLEALYAAGL-SPVYVGEN-P---GLVPAP--------ALT 65 (232)
T ss_dssp CCCEEEEECCCB-CSGGGT-TTCSBGGGSEETTEETHHHHHHHHHHTTC-EEEEESCC-S---SCSSCC--------SEE
T ss_pred CceeEEEECCCC-Cccccc-cCCCCceeeEECCEEHHHHHHHHHHhcCC-EEEEEeCh-H---HHhhhc--------CeE
Confidence 889999999999 777666 44589999999999999999999999998 88887552 1 222221 344
Q ss_pred EEEcCCCCChHHHHHHHHHHcCCCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEee
Q 017849 81 VATVPEDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMICS 139 (365)
Q Consensus 81 i~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~~ 139 (365)
+ +...|++++++.+++.+. +.+++++||. +...++..+++ | ..++++++...+
T Consensus 66 ~---~~~~g~~~~i~~a~~~~~-~~~lv~~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~~~ 120 (232)
T 2dpw_A 66 L---PDRGGLLENLEQALEHVE-GRVLVATGDIPHLTEEAVRFVLD-K-APEAALVYPIVP 120 (232)
T ss_dssp E---CCCSSHHHHHHHHHHTCC-SEEEEEETTCTTCCHHHHHHHHH-H-CCSCSEEEEEEE
T ss_pred e---cCCCCHHHHHHHHHHHcC-CCEEEEeCCcccCCHHHHHHHHh-c-CCCCCEEEEEee
Confidence 4 567899999999998886 7899999997 66677899998 6 556677766544
No 42
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=99.58 E-value=8e-15 Score=130.02 Aligned_cols=119 Identities=16% Similarity=0.169 Sum_probs=82.7
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCC-CCeEEEEecCcchHHHHHHHHHhhhcCCcce
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~g-i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v 79 (365)
|++.|||||||.|+||+ ...||+|+|++|+|||+|+++.+..++ +++|+|++++.. +.+.+ +.... ...+
T Consensus 5 ~~~~aiIlA~G~g~R~~----~~~~K~l~~~~gkpli~~~l~~l~~~~~~~~ivvv~~~~~--~~~~~-~~~~~--~~~i 75 (231)
T 1vgw_A 5 RKNIALIPAAGIGVRFG----ADKPKQYVEIGSKTVLEHVLGIFERHEAVDLTVVVVSPED--TFADK-VQTAF--PQVR 75 (231)
T ss_dssp CCEEEEEECC--------------CCSCCEETTEEHHHHHHHHHHTCTTCCEEEEECCTTC--STHHH-HHHHC--TTSE
T ss_pred CceEEEEEcccccccCC----CCCCceEeEECCeEHHHHHHHHHHcCCCCCeEEEEECccH--HHHHH-HHhcC--CCce
Confidence 56789999999999994 357999999999999999999999886 999999998653 24444 43321 1134
Q ss_pred EEEEcCCCCChHHHHHHHHHHc-------CCCcEEEEeCCc--ccCCChHHHHHHHHhcC
Q 017849 80 EVATVPEDVGTAGALRAIAHHL-------TAKDVLVVSGDL--VSDVPPGAVTAAHRRHD 130 (365)
Q Consensus 80 ~i~~~~~~~gt~~al~~~~~~i-------~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~ 130 (365)
.++ .+..|++++++.+++.+ ..+.+++++||. +....+..+++.+.+.+
T Consensus 76 ~~~--~~~~~~~~si~~~l~~~~~~~~~~~~~~vlv~~~D~p~~~~~~i~~l~~~~~~~~ 133 (231)
T 1vgw_A 76 VWK--NGGQTRAETVRNGVAKLLETGLAAETDNILVHDAARCCLPSEALARLIEQAGNAA 133 (231)
T ss_dssp EEC--CCCSSHHHHHHHHHHHHHHHSSSCTTSEEEECCTTCTTCCHHHHHHHHHHHTTCT
T ss_pred EEE--cCCCcHHHHHHHHHHHHhhhccCCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcC
Confidence 333 45678999999887766 346799999994 44567899999887654
No 43
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=99.58 E-value=1.5e-14 Score=128.40 Aligned_cols=122 Identities=14% Similarity=0.110 Sum_probs=93.9
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCC-CCeEEEEecCcchHHHHHHHHHhhhcCCcce
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~g-i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v 79 (365)
|++.|||||||.|+|| . +|+|+|++|+|||+|+++.+..++ +++|+|++.. +.+.+++..+ ++
T Consensus 2 ~~~~aiIlA~G~s~R~----~---~K~l~~i~Gkpli~~~i~~~~~~~~~~~ivv~~~~----~~i~~~~~~~-----g~ 65 (229)
T 1qwj_A 2 PHLAALVLARGGSKGI----P---LKNIKRLAGVPLIGWVLRAALDAGVFQSVWVSTDH----DEIENVAKQF-----GA 65 (229)
T ss_dssp CCEEEEEECCSCCSSS----S---CTTTSEETTEEHHHHHHHHHHHHTCCSEEEEEESC----HHHHHHHHHT-----TC
T ss_pred CcEEEEEEcCCCCCCC----C---CcccceECCEEHHHHHHHHHHhCCCcCEEEEECCh----HHHHHHHHHc-----CC
Confidence 7889999999999999 3 499999999999999999999998 6999999852 3566666532 45
Q ss_pred EEEEcC-----CCCChHHHHHHHHHHcC-CCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEEEEe
Q 017849 80 EVATVP-----EDVGTAGALRAIAHHLT-AKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTAMIC 138 (365)
Q Consensus 80 ~i~~~~-----~~~gt~~al~~~~~~i~-~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~l~~ 138 (365)
.++..+ ...+..+++..+++.+. .+.+++++||. +...++..+++.|.+.+++.++.+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~v~~al~~~~~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~~ 132 (229)
T 1qwj_A 66 QVHRRSSETSKDSSTSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSVV 132 (229)
T ss_dssp EEEECCGGGSSTTCCHHHHHHHHHTTCTTCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEEE
T ss_pred EEEeChhhhcCCCCcHHHHHHHHHHhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEEe
Confidence 555433 23344588888888773 46699999994 5567899999999887776554443
No 44
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=99.57 E-value=7.5e-14 Score=136.54 Aligned_cols=193 Identities=13% Similarity=0.141 Sum_probs=128.7
Q ss_pred cceEEEEcCCCCCCCCCCCCCCCCceecee---CCcchHHHHHHHHHh--------CC----CCeEEEEecCcchHHHHH
Q 017849 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPV---ANRPVLSYVLEQLEL--------SN----IKDLIVVVEGADAALRVG 66 (365)
Q Consensus 2 ~~~avIlA~G~g~rl~pL~t~~~pK~llpv---~gkplI~~~L~~l~~--------~g----i~~v~vv~~~~~~~~~i~ 66 (365)
++.+||||||.|||| +...||+|+|| .|+|+|++.++.+.. .| +..+++...+. .+.+.
T Consensus 102 kvavViLAGG~GTRL----g~~~PK~l~pv~~~~gk~~le~~~e~l~~lq~la~~~~G~~~~ip~vImtS~~t--~e~t~ 175 (505)
T 1jv1_A 102 KVAVLLLAGGQGTRL----GVAYPKGMYDVGLPSRKTLFQIQAERILKLQQVAEKYYGNKCIIPWYIMTSGRT--MESTK 175 (505)
T ss_dssp CEEEEEECCCCCCTT----SCSSCGGGCCCCCTTCCCHHHHHHHHHHHHHHHHHHHHSSCCCCCEEEEECTTT--HHHHH
T ss_pred ceEEEEEcCCccccC----CCCCCCccceeecCCCCcHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCC--HHHHH
Confidence 478999999999999 77899999999 799999999999876 25 65555554433 35788
Q ss_pred HHHHh--hhc-CCcceEEEEc---------------------CCCCChHHHHHHHHH-----Hc---CCCcEEEEeCCcc
Q 017849 67 GWISA--AYV-DRLHVEVATV---------------------PEDVGTAGALRAIAH-----HL---TAKDVLVVSGDLV 114 (365)
Q Consensus 67 ~~~~~--~~~-~~~~v~i~~~---------------------~~~~gt~~al~~~~~-----~i---~~~~~lv~~~D~i 114 (365)
+++++ +++ ++-.+.++.+ ..+.|+|+.+..+.. .+ ..++++|+++|.+
T Consensus 176 ~~f~~~~~fGl~~~~I~~f~Q~~~P~i~~~g~~~l~~~~~~e~~P~GtGG~~~~L~~sg~L~~l~~~g~e~~~V~n~Dn~ 255 (505)
T 1jv1_A 176 EFFTKHKYFGLKKENVIFFQQGMLPAMSFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDNI 255 (505)
T ss_dssp HHHHHTGGGGSCGGGEEEEECCEEECEETTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHTTCCEEEEEETTBT
T ss_pred HHHHhhhhcCCCcCceEEEEecceEEEcCCCcccccCCcccccCCCCchHHHHHHHHcCcHHHHHhcCCCEEEEEECCcc
Confidence 88865 221 1112443332 246899988775532 22 2478999999985
Q ss_pred -cCCChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCCccCCCCCCcceEEEEcCCCcE-EEEeeccccccccccccH
Q 017849 115 -SDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQF-LLHIATGAELEKDTRIRK 192 (365)
Q Consensus 115 -~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~-l~~~~~~~~~ek~~~i~~ 192 (365)
...+...++..|..+++++++.+.+.. ..++.+|++..+. |+. ++.+.+ . +.
T Consensus 256 L~~~~d~~~lg~~~~~~~~~~~~v~~k~----------------~~~e~~Gvl~~~d-g~~~vvEy~E-----~----p~ 309 (505)
T 1jv1_A 256 LVKVADPRFIGFCIQKGADCGAKVVEKT----------------NPTEPVGVVCRVD-GVYQVVEYSE-----I----SL 309 (505)
T ss_dssp TCCTTCHHHHHHHHHTTCSEEEEEEECC----------------STTCSCCEEEEET-TEEEEECGGG-----S----CH
T ss_pred ccccchHHHHHHHHHcCCCEEEEEEEcc----------------CCccCcceEEEEC-CeEEEEEEee-----C----CH
Confidence 767677899999999999998776421 1255778887753 432 223322 1 11
Q ss_pred HHHhh-cCcceeccCcccceeeeeCHHHHHHHHhc
Q 017849 193 SILRA-VGQMDIRADLMDAHMYAFNRSVLQEVLDQ 226 (365)
Q Consensus 193 ~~l~~-~~~~~~~~~l~~~giyi~s~~vl~~~~~~ 226 (365)
..... .+.-....++.++++|+|+.++|..+.++
T Consensus 310 ~~~~~~~~~g~~~~~~~N~~~~~f~l~~L~~i~~~ 344 (505)
T 1jv1_A 310 ATAQKRSSDGRLLFNAGNIANHFFTVPFLRDVVNV 344 (505)
T ss_dssp HHHHCBCTTSSBSSCEEEEEEEEEEHHHHHHHHHT
T ss_pred HHhhhcccccccccceeeEEEEEecHHHHHHHHHh
Confidence 11111 01112234789999999999999888654
No 45
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=99.54 E-value=3.5e-14 Score=123.42 Aligned_cols=115 Identities=21% Similarity=0.283 Sum_probs=87.6
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceE
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~ 80 (365)
|++.|||||||.|+||+ ..||+|+|++|+|||+|+++.+.. ++++|+|++++.. +. + .. .++.
T Consensus 5 m~~~~iILAgG~s~Rmg-----~~~K~ll~i~G~pli~~~l~~l~~-~~~~ivvv~~~~~--~~---~-~~-----~~~~ 67 (201)
T 1e5k_A 5 TTITGVVLAGGKARRMG-----GVDKGLLELNGKPLWQHVADALMT-QLSHVVVNANRHQ--EI---Y-QA-----SGLK 67 (201)
T ss_dssp CSEEEEEECCCCCSSSC-----SSCGGGSEETTEEHHHHHHHHHHH-HCSCEEEECSSSH--HH---H-HT-----TSCC
T ss_pred CcceEEEEcCCCCCcCC-----CCCCceeeECceeHHHHHHHHHHh-hCCEEEEEcCCcH--HH---H-hh-----cCCe
Confidence 57899999999999993 479999999999999999999984 5899999998542 12 2 11 2454
Q ss_pred EEEcCC-C-CChHHHHHHHHHHcCCCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEE
Q 017849 81 VATVPE-D-VGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVT 134 (365)
Q Consensus 81 i~~~~~-~-~gt~~al~~~~~~i~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t 134 (365)
++..+. . .|++++++.+++.+..+.+++++||+ +....+..+++. ..+++++
T Consensus 68 ~v~~~~~~~~G~~~si~~~l~~~~~~~vlv~~~D~P~i~~~~i~~l~~~--~~~~~~~ 123 (201)
T 1e5k_A 68 VIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDTPYIPPDLAARLNHQ--RKDAPVV 123 (201)
T ss_dssp EECCCTTCCCSHHHHHHHHHHHCCSSEEEEEETTCTTCCTTHHHHHHHT--CTTCSEE
T ss_pred EEecCCCCCCCHHHHHHHHHHhCCCCcEEEEeCCcCcCCHHHHHHHHhh--cCCCCEE
Confidence 554332 2 79999999999888767799999996 555667888776 3344443
No 46
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=99.54 E-value=1.2e-14 Score=125.97 Aligned_cols=114 Identities=19% Similarity=0.270 Sum_probs=86.2
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceE
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~ 80 (365)
|++.|||||||.|+|| . .||+|+|++|+|||+|+++.+..+ +++|++++.. +.+.+++. .++
T Consensus 1 M~~~~iIlAgG~g~Rm----g--~~K~l~~i~g~pll~~~l~~l~~~---~ivvv~~~~~--~~~~~~~~------~~~- 62 (197)
T 3d5n_A 1 MNIGVIILAAGEGKRF----G--GDKLLAKIDNTPIIMRTIRIYGDL---EKIIIVGKYV--NEMLPLLM------DQI- 62 (197)
T ss_dssp CCEEEEEECSCCTTCC----C--SSGGGSBSSSSBHHHHHHHHTTTS---BCCEEECTTH--HHHGGGCT------TSC-
T ss_pred CceEEEEECCcCcccC----C--CCeeeCEeCceEHHHHHHHHHHhC---CEEEEECCCH--HHHHHHhc------CCE-
Confidence 8899999999999999 3 489999999999999999999877 8888887541 23333322 245
Q ss_pred EEEcCC-CCChHHHHHHHHHHcCC-CcEEEEeCCc--ccCCChHHHHHHHHhcCCeE
Q 017849 81 VATVPE-DVGTAGALRAIAHHLTA-KDVLVVSGDL--VSDVPPGAVTAAHRRHDAVV 133 (365)
Q Consensus 81 i~~~~~-~~gt~~al~~~~~~i~~-~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~ 133 (365)
++..+. ..|++++++.+++.+.. +.+++++||. +....+..+++.+ +.++++
T Consensus 63 ~v~~~~~~~G~~~si~~al~~~~~~~~vlv~~~D~P~i~~~~i~~l~~~~-~~~~~~ 118 (197)
T 3d5n_A 63 VIYNPFWNEGISTSLKLGLRFFKDYDAVLVALGDMPFVTKEDVNKIINTF-KPNCKA 118 (197)
T ss_dssp EEECTTGGGCHHHHHHHHHHHTTTSSEEEEEETTCCCSCHHHHHHHHHTC-CTTCSE
T ss_pred EEECCCCCCCHHHHHHHHHHhhccCCcEEEEeCCccccCHHHHHHHHHHh-cCCCcE
Confidence 554333 47999999999988864 5799999996 4445678888776 444443
No 47
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=99.51 E-value=1.3e-14 Score=129.21 Aligned_cols=119 Identities=20% Similarity=0.243 Sum_probs=89.6
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCC-CCeEEEEecCcchHHHHHHHHHhhhcCCcce
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~g-i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v 79 (365)
|++.|||||||.|+|| ....||+|+|++|+|||+|+++.+..++ +++|+|++++.. +.+.+ +... .. ..+
T Consensus 6 ~~~~~iIlA~G~g~R~----~~~~~K~l~~i~g~pll~~~i~~l~~~~~~~~ivvv~~~~~--~~~~~-~~~~-~~-~~v 76 (236)
T 1i52_A 6 LDVCAVVPAAGFGRRM----QTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGD--SRFAQ-LPLA-NH-PQI 76 (236)
T ss_dssp CCEEEEEEECCCCGGG----CCSSCGGGSEETTEEHHHHHHHHHHTSTTEEEEEEEECTTC--CSGGG-SGGG-GC-TTE
T ss_pred CceeEEEECCcCcccc----CCCCCcceeeECCEEHHHHHHHHHHhCCCCCeEEEEeCccH--HHHHH-HHhc-CC-CCE
Confidence 5789999999999999 4457999999999999999999999887 899999998542 12333 3221 11 134
Q ss_pred EEEEcCCCCChHHHHHHHHHHcC-CCcEEEEeCCc--ccCCChHHHHHHHHhcC
Q 017849 80 EVATVPEDVGTAGALRAIAHHLT-AKDVLVVSGDL--VSDVPPGAVTAAHRRHD 130 (365)
Q Consensus 80 ~i~~~~~~~gt~~al~~~~~~i~-~~~~lv~~~D~--i~~~~l~~~l~~h~~~~ 130 (365)
.++. ...|..++++.+++.+. .+.+++++||. +....+..+++.+.+.+
T Consensus 77 ~~~~--~~~g~~~~i~~al~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~ 128 (236)
T 1i52_A 77 TVVD--GGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSR 128 (236)
T ss_dssp EEEE--CCSSHHHHHHHHHHTSTTCSEEEECCTTCTTCCHHHHHHHHGGGGTCS
T ss_pred EEEC--CCCCHHHHHHHHHHhcCCCCEEEEEcCccccCCHHHHHHHHHHHHhcC
Confidence 4443 33688999999988874 46799999995 44456888888876655
No 48
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=99.49 E-value=7.1e-14 Score=124.14 Aligned_cols=118 Identities=20% Similarity=0.238 Sum_probs=85.9
Q ss_pred ceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCC-CCeEEEEecCcchHHHHHHHHHhhhcCCcceEE
Q 017849 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (365)
Q Consensus 3 ~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~g-i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i 81 (365)
+.|||||||.|+|| ....||+|+|++|+|||+|+++.+..++ +++|+|++++... +.+.+++. + ...+
T Consensus 14 ~~aiILAaG~s~Rm----~~~~~K~l~~i~Gkpli~~~i~~l~~~~~~~~ivVv~~~~~~-~~~~~~~~--~----~~~~ 82 (234)
T 1vpa_A 14 NVAILLAAGKGERM----SENVPKQFLEIEGRMLFEYPLSTFLKSEAIDGVVIVTRREWF-EVVEKRVF--H----EKVL 82 (234)
T ss_dssp EEEEEEECCCCGGG----CCSSCGGGCEETTEETTHHHHHHHHHCTTCSEEEEEECGGGH-HHHHTTCC--C----TTEE
T ss_pred CeEEEEcCcchhhc----CCCCCceEEEECCeEHHHHHHHHHHcCCCCCeEEEEEChHHH-HHHHHHhc--c----CCce
Confidence 68999999999999 4457999999999999999999999998 8999999985431 12232222 1 1112
Q ss_pred EEcCCCCChHHHHHHHHHHcC---CCcEEEEeCCc--ccCCChHHHHHHHHhcCC
Q 017849 82 ATVPEDVGTAGALRAIAHHLT---AKDVLVVSGDL--VSDVPPGAVTAAHRRHDA 131 (365)
Q Consensus 82 ~~~~~~~gt~~al~~~~~~i~---~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a 131 (365)
.......+..++++.+++.+. .+.+++++||. +....+..+++.+.+.++
T Consensus 83 ~~~~gg~~~~~sv~~al~~~~~~~~~~vlv~~~D~Pli~~~~i~~l~~~~~~~~~ 137 (234)
T 1vpa_A 83 GIVEGGDTRSQSVRSALEFLEKFSPSYVLVHDSARPFLRKKHVSEVLRRARETGA 137 (234)
T ss_dssp EEEECCSSHHHHHHHHHHHHGGGCCSEEEEEETTSCCCCHHHHHHHHHHHHHHSE
T ss_pred EEeCCCCcHHHHHHHHHHHhhhcCCCEEEEecCcccCCCHHHHHHHHHHHHhcCC
Confidence 222233457788888877763 34577888995 556678999998876554
No 49
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=99.49 E-value=2.8e-13 Score=120.16 Aligned_cols=113 Identities=18% Similarity=0.234 Sum_probs=88.2
Q ss_pred ceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCC-CCeEEEEecCcchHHHHHHHHHhhhcCCcceEE
Q 017849 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSN-IKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (365)
Q Consensus 3 ~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~g-i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i 81 (365)
+.|||||||.|+|| ....||+|++++|+|||+|+++.+..++ +++|+|++++... +.+.+++.. .+.+
T Consensus 8 ~~aIIlAaG~g~Rm----g~~~~K~l~~l~Gkpll~~~l~~~~~~~~~~~ivVv~~~~~~-~~~~~~~~~------~v~~ 76 (231)
T 3q80_A 8 VVAIVPAAGSGERL----AVGVPKAFYQLDGQTLIERAVDGLLDSGVVDTVVVAVPADRT-DEARQILGH------RAMI 76 (231)
T ss_dssp EEEEEECCCCCTTT----CSSSCGGGCEETTEEHHHHHHHHHHHTSCCCEEEEEECGGGH-HHHHHHHGG------GCEE
T ss_pred eEEEEECCCCCccC----CCCCCceEEEECCeEHHHHHHHHHHhCCCCCeEEEECChHHH-HHHHHHhcC------CeEE
Confidence 57999999999999 6678999999999999999999999885 8999999986532 244444332 3444
Q ss_pred EEcCCCCChHHHHHHHHHHcCC----CcEEEEeCC--cccCCChHHHHHHHHh
Q 017849 82 ATVPEDVGTAGALRAIAHHLTA----KDVLVVSGD--LVSDVPPGAVTAAHRR 128 (365)
Q Consensus 82 ~~~~~~~gt~~al~~~~~~i~~----~~~lv~~~D--~i~~~~l~~~l~~h~~ 128 (365)
+. ...+..++++.+++.+.. +.++++.|| ++....++.+++.+.+
T Consensus 77 v~--gg~~r~~sv~~gl~~~~~~~~~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 77 VA--GGSNRTDTVNLALTVLSGTAEPEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp EE--CCSSHHHHHHHHHGGGC---CCSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred Ec--CCCchHHHHHHHHHHhhhcCCCCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 43 334567899999888763 468899999 5777789999999876
No 50
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=99.45 E-value=1.8e-13 Score=121.87 Aligned_cols=113 Identities=23% Similarity=0.275 Sum_probs=80.0
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceE
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVE 80 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~ 80 (365)
|++.|||||||.|+||+ .. ||+|+|++|+|||+|+++. ..++++|+|+++. .. .+ +.. .++.
T Consensus 24 M~~~aiILAgG~s~Rm~----~~-~K~l~~i~gkpli~~~l~~--~~~~~~ivvv~~~-~~----~~-~~~-----~~v~ 85 (236)
T 2px7_A 24 MEVSVLIPAAGNGLRLG----RG-PKAFLQVGGRTLLEWTLAA--FRDAAEVLVALPP-GA----EP-PKG-----LGAV 85 (236)
T ss_dssp CCCEEEEECCC-----------C-CGGGCBCSSSBHHHHHHHH--TTTCSEEEEEECT-TC----CC-CTT-----CSCE
T ss_pred CceEEEEEcCCCCccCC----CC-CCeEEEECCEEHHHHHHHh--cCCCCeEEEEeCH-HH----HH-hhc-----CCcE
Confidence 66679999999999994 34 9999999999999999999 7789999999984 11 11 211 2344
Q ss_pred EEEcCCCCChHHHHHHHHHHcCCCcEEEEeCCc--ccCCChHHHHHHHHhcCCeE
Q 017849 81 VATVPEDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVV 133 (365)
Q Consensus 81 i~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~ 133 (365)
++. +..|..++++.++..+..+.+++++||. +....+..+++.+.+.++.+
T Consensus 86 ~~~--~~~~~~~~i~~al~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~i 138 (236)
T 2px7_A 86 FLE--GGATRQASVARLLEAASLPLVLVHDVARPFVSRGLVARVLEAAQRSGAAV 138 (236)
T ss_dssp EEE--CCSSHHHHHHHHHHHCCSSEEEECCTTCCCCCHHHHHHHHHHHHHHSEEE
T ss_pred EEe--CCCchHHHHHHHHHHcCCCeEEEecCccccCCHHHHHHHHHHHHhcCCeE
Confidence 443 3457889999998887656699999995 44566889999887655433
No 51
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=99.43 E-value=1.6e-13 Score=119.28 Aligned_cols=103 Identities=23% Similarity=0.265 Sum_probs=80.6
Q ss_pred cceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceEE
Q 017849 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEV 81 (365)
Q Consensus 2 ~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i 81 (365)
++.|||||||.|+|| . .||+|+|++|+|||+|+++.+..+ +++|+|++++... +++. ++.+
T Consensus 14 ~~~~iILA~G~g~Rm----g--~~K~ll~i~g~pll~~~l~~l~~~-~~~i~vv~~~~~~-----~~~~-------~~~~ 74 (201)
T 2e8b_A 14 VNTCYVLAGGKSKRF----G--EDKLLYEIKGKKVIERVYETAKSV-FKEVYIVAKDREK-----FSFL-------NAPV 74 (201)
T ss_dssp CCEEEEEEESSCCCC----S--TTHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEESCSGG-----GGGG-------TCCE
T ss_pred CceEEEECCCCCccC----C--CCcccceECceEHHHHHHHHHHHh-CCEEEEEeCcHHH-----hhcC-------CceE
Confidence 468999999999999 3 799999999999999999999988 9999999986531 1111 3555
Q ss_pred EEcC-CCCChHHHHHHHHHHcCCCcEEEEeCCcc--cCCChHH-HH
Q 017849 82 ATVP-EDVGTAGALRAIAHHLTAKDVLVVSGDLV--SDVPPGA-VT 123 (365)
Q Consensus 82 ~~~~-~~~gt~~al~~~~~~i~~~~~lv~~~D~i--~~~~l~~-~l 123 (365)
+..+ ...|++++++.+++.+..+.+++++||+. ....+.. ++
T Consensus 75 v~~~~~~~g~~~~i~~al~~~~~~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 75 VLDEFEESASIIGLYTALKHAKEENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp EECCCSSCCHHHHHHHHHHHCSSSEEEEEETTCTTCCHHHHHHHHH
T ss_pred EecCCCCCCcHHHHHHHHHHcCCCCEEEEeCCcCcCCHHHHHHHHh
Confidence 5533 45899999999998887678999999963 3333555 44
No 52
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=99.42 E-value=3.1e-13 Score=127.72 Aligned_cols=115 Identities=18% Similarity=0.250 Sum_probs=89.6
Q ss_pred CcceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHh-CCCCeEEEEecCcchHHHHHHHHHhhhcCCcce
Q 017849 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLEL-SNIKDLIVVVEGADAALRVGGWISAAYVDRLHV 79 (365)
Q Consensus 1 M~~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~-~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v 79 (365)
|++.+||||||.|+|| ....||+|+|++|+|||+|+++.+.. .++++|+|+++ . .+.+.+++. ++
T Consensus 2 mki~aIILAaG~ssRm----g~~~pK~ll~l~GkPLi~~~l~~l~~~~~~~~IvVvt~-~--~~~i~~~~~-------~v 67 (371)
T 1w55_A 2 SEMSLIMLAAGNSTRF----NTKVKKQFLRLGNDPLWLYATKNLSSFYPFKKIVVTSS-N--ITYMKKFTK-------NY 67 (371)
T ss_dssp CCEEEEEECCSCCTTT----CSSSCGGGCEEBTEEHHHHHHHHHHTTSCCSCEEEEES-C--HHHHHTTCS-------SS
T ss_pred CccEEEEECCCCCccC----CCCCCcceEEECCeEHHHHHHHHHHccCCCCeEEEEcC-C--HHHHHHHhC-------CC
Confidence 5789999999999999 44679999999999999999999988 57999999998 3 233333221 14
Q ss_pred EEEEcCCCCChHHHHHHHHHHcCCCcEEEEeCCc--ccCCChHHHHHHHHhcCC
Q 017849 80 EVATVPEDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAAHRRHDA 131 (365)
Q Consensus 80 ~i~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a 131 (365)
.++ ....|..++++.+++.+..+.++++.||. +....++.+++.+.+.++
T Consensus 68 ~~v--~~g~g~~~sv~~aL~~l~~d~vlv~~~D~Pli~~~~i~~li~~~~~~~a 119 (371)
T 1w55_A 68 EFI--EGGDTRAESLKKALELIDSEFVMVSDVARVLVSKNLFDRLIENLDKADC 119 (371)
T ss_dssp EEE--ECCSSHHHHHHHHHTTCCSSEEEEEETTCTTCCHHHHHHHHTTGGGCSE
T ss_pred EEE--eCCCChHHHHHHHHHhcCCCeEEEEeCCcccCCHHHHHHHHHHHHhcCC
Confidence 444 33567889999998887667799999995 555678888888776543
No 53
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=99.41 E-value=1.3e-12 Score=113.95 Aligned_cols=114 Identities=18% Similarity=0.255 Sum_probs=84.7
Q ss_pred ceEEEEcCCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeEEEEecCcchHHHHHHHHHhhhcCCcceEEE
Q 017849 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDLIVVVEGADAALRVGGWISAAYVDRLHVEVA 82 (365)
Q Consensus 3 ~~avIlA~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i~ 82 (365)
|.|||||||.|+|| . .||+|++++|+|||+|+++.+..+ +|+|+++.. +.+..+. . ..++.++
T Consensus 1 m~aiILAgG~s~Rm----g--~~K~ll~~~G~pli~~~~~~l~~~---~vvvv~~~~---~~~~~~~-~----~~~~~~v 63 (208)
T 3ngw_A 1 MKVAVLVGGVGRRI----G--MEKTEVMLCGKKLIEWVLEKYSPF---QTVFVCRDE---KQAEKLS-S----RYEAEFI 63 (208)
T ss_dssp CEEEEECCCCCTTT----T--SCGGGCEETTEEHHHHHHHHHTTS---EEEEECSSH---HHHHHHH-T----TSCSCEE
T ss_pred CEEEEECCCchhhC----C--CCCcccEECCeeHHHHHHHHhcCC---CEEEEECCH---HHHHHHH-H----hcCCeEE
Confidence 57999999999999 4 789999999999999999999877 899998742 2333322 1 1245555
Q ss_pred EcC-CCCChHHHHHHHHHHcCCCcEEEEeCCc--ccCCChHHHHHHHHhcCCeEEE
Q 017849 83 TVP-EDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTAAHRRHDAVVTA 135 (365)
Q Consensus 83 ~~~-~~~gt~~al~~~~~~i~~~~~lv~~~D~--i~~~~l~~~l~~h~~~~a~~t~ 135 (365)
... ...|...+++.+++.+ .+.+ ++.||+ +....+..+++.+.+.++++.+
T Consensus 64 ~d~~~~~G~~~si~~gl~~~-~~~v-v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~ 117 (208)
T 3ngw_A 64 WDLHKGVGSIAGIHAALRHF-GSCV-VAAIDMPFVKPEVLEHLYKEGEKAGCDALI 117 (208)
T ss_dssp CCTTCCCSHHHHHHHHHHHH-SSEE-EEETTCTTCCHHHHHHHHHHHHHHTCSEEE
T ss_pred ecCCCCCChHHHHHHHHHHc-CCCE-EEECCccCCCHHHHHHHHHHhhcCCCCEEE
Confidence 432 2367889999998877 6667 999995 4555688888887755555543
No 54
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=99.35 E-value=6.9e-12 Score=122.07 Aligned_cols=193 Identities=13% Similarity=0.106 Sum_probs=124.4
Q ss_pred cceEEEEcCCCCCCCCCCCCCCCCceeceeC-CcchHHHHHHHHHhCCCC-----eEEEEecCcchHHHHHHHHH-h--h
Q 017849 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVA-NRPVLSYVLEQLELSNIK-----DLIVVVEGADAALRVGGWIS-A--A 72 (365)
Q Consensus 2 ~~~avIlA~G~g~rl~pL~t~~~pK~llpv~-gkplI~~~L~~l~~~gi~-----~v~vv~~~~~~~~~i~~~~~-~--~ 72 (365)
++.+||||||.|||| ....||+|+||+ |||+|++.++++...|.. .++|.++.. ..+.+.++++ + +
T Consensus 75 k~avViLAGGlGTRL----g~~~PK~llpV~~gk~fLe~~ie~l~~~~~~~g~~ip~viMtS~~-t~e~t~~~f~~~~~~ 149 (505)
T 2oeg_A 75 STVVLKLNGGLGTGM----GLCDAKTLLEVKDGKTFLDFTALQVQYLRQHCSEHLRFMLMDSFN-TSASTKSFLKARYPW 149 (505)
T ss_dssp TEEEEEEECCCCGGG----TCCSCGGGSEEETTEEHHHHHHHHHHHHHHHTCTTCEEEEEECHH-HHHHHHHHHHHHCHH
T ss_pred cceEEEEcCCccccc----CCCCCCcccccCCCCcHHHHHHHHHHHHHHhcCCCcCEEEEeCCC-CHHHHHHHHhhhhhc
Confidence 357899999999999 568999999999 999999999999887532 566666533 2457888887 3 3
Q ss_pred hc-CCcceEEE-----------------E------cCCCCChHHHHHHH-----HHHc---CCCcEEEEeCCcccC-CCh
Q 017849 73 YV-DRLHVEVA-----------------T------VPEDVGTAGALRAI-----AHHL---TAKDVLVVSGDLVSD-VPP 119 (365)
Q Consensus 73 ~~-~~~~v~i~-----------------~------~~~~~gt~~al~~~-----~~~i---~~~~~lv~~~D~i~~-~~l 119 (365)
++ ++-.+.+. . ...+.|+|+++... ++.+ ..++++|.++|.+.. .|+
T Consensus 150 fGl~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e~i~V~N~DNL~~~~D~ 229 (505)
T 2oeg_A 150 LYQVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYRYMFVSNGDNLGATIDK 229 (505)
T ss_dssp HHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCCEEEEECTTCTTCCCCH
T ss_pred cCCCccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCCEEEEEECCccccccCH
Confidence 21 11122211 1 01246999988744 3332 247899999998774 577
Q ss_pred HHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCCccCCCCCCcceEEEEc------CCCc-------E-EEEeecccccc
Q 017849 120 GAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMD------PTKQ-------F-LLHIATGAELE 185 (365)
Q Consensus 120 ~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d------~~~~-------~-l~~~~~~~~~e 185 (365)
.++..|.++++++++.+.+... + ...+|++..+ .+|+ . ++.+.+
T Consensus 230 -~llg~~~~~~ad~~~~v~~k~~--~--------------d~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse----- 287 (505)
T 2oeg_A 230 -RVLAYMEKEKIDFLMEVCRRTE--S--------------DKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQ----- 287 (505)
T ss_dssp -HHHHHHHHHTCSEEEEEEECCT--T--------------CCSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGG-----
T ss_pred -HHHHHHHhcCCcEEEEEEEecC--C--------------ccceeEEEEecccccccCCccccccCceeEEEecc-----
Confidence 8899999999999998876531 1 2356777662 3454 1 222221
Q ss_pred ccccccHHHHhhcCcceeccCcccceeeeeCHHHHHHHHhc
Q 017849 186 KDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQ 226 (365)
Q Consensus 186 k~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~~~~ 226 (365)
++......... .....+.++...+|+-+.+..+++.
T Consensus 288 ----~p~e~~~~~~g-~~~f~~~Ninn~~~~l~~l~~~~~~ 323 (505)
T 2oeg_A 288 ----CPKADMESFQD-INKYSFFNTNNLWIRLPVLLETMQE 323 (505)
T ss_dssp ----SCGGGHHHHHC-TTTTCEEEEEEEEEEHHHHHHHHHH
T ss_pred ----CChhhhhcccC-ccccCeeEEEEEEEEHHHHHHHHhh
Confidence 12111111100 1122456888889999988877664
No 55
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=99.22 E-value=2.5e-10 Score=111.27 Aligned_cols=193 Identities=11% Similarity=0.155 Sum_probs=122.4
Q ss_pred cceEEEEcCCCCCCCCCCCCCCCCceeceeC---CcchHHHHHHHHHhC--------C------CCeEEEEecCcchHHH
Q 017849 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVA---NRPVLSYVLEQLELS--------N------IKDLIVVVEGADAALR 64 (365)
Q Consensus 2 ~~~avIlA~G~g~rl~pL~t~~~pK~llpv~---gkplI~~~L~~l~~~--------g------i~~v~vv~~~~~~~~~ 64 (365)
++.+||||||.|||| +...||+|+||+ |+|+|++.++.+... | +..+++...+. .+.
T Consensus 103 kvavvlLaGG~GTRL----g~~~PK~l~~v~l~~gk~~l~~~~e~l~~~~~~~~~~~G~~~~~~ip~~ImtS~~t--~~~ 176 (486)
T 2yqc_A 103 EVAVLLMAGGQGTRL----GSSAPKGCFNIELPSQKSLFQIQAEKILKIEQLAQQYLKSTKKPIINWYIMTSGPT--RNA 176 (486)
T ss_dssp CEEEEEEEESBCGGG----TCSSBGGGCBCCCTTCCBHHHHHHHHHHHHHHHHHHHHTCSSCCCCEEEEEECGGG--HHH
T ss_pred CeEEEEEcCCccccC----CCCCCCccceecCCCCCcHHHHHHHHHHHHHHHhhhhcCCCcCCccCEEEEECCCC--HHH
Confidence 478999999999999 788999999999 999999999999876 5 66555555543 357
Q ss_pred HHHHHHh--hhc-CCcceEEEEc--------C--------------CCCChHHHHHHHHH-----Hc---CCCcEEEEeC
Q 017849 65 VGGWISA--AYV-DRLHVEVATV--------P--------------EDVGTAGALRAIAH-----HL---TAKDVLVVSG 111 (365)
Q Consensus 65 i~~~~~~--~~~-~~~~v~i~~~--------~--------------~~~gt~~al~~~~~-----~i---~~~~~lv~~~ 111 (365)
+.+++++ +++ +...+.+..| + .+.|+|+.+..... .+ ..+++.+.+.
T Consensus 177 t~~~~~~~~~fgl~~~~v~~f~Q~~~P~i~~dg~~i~l~~~~~i~~~P~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~v 256 (486)
T 2yqc_A 177 TESFFIENNYFGLNSHQVIFFNQGTLPCFNLQGNKILLELKNSICQSPDGNGGLYKALKDNGILDDLNSKGIKHIHMYCV 256 (486)
T ss_dssp HHHHHHHTGGGGSCGGGEEEEECCEEECBCTTSSSBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEEET
T ss_pred HHHHHhhccccCCCcceEEEEecccceeEcCCCCccccCCCCccccCcCCchHHHHHHHHcCcHHHHHhcCCeEEEEECC
Confidence 8888865 222 1112322221 1 25688887654422 22 2367888888
Q ss_pred Cccc--CCChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCCccCCCCCCcceEEEEcC-CCc-EEEEeecccccccc
Q 017849 112 DLVS--DVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDP-TKQ-FLLHIATGAELEKD 187 (365)
Q Consensus 112 D~i~--~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~-~~~-~l~~~~~~~~~ek~ 187 (365)
|.+. ..|. .++..|..+++++++.+.+.. .| ....|++.... +|+ .++.+.+.+
T Consensus 257 DN~l~~~~Dp-~~lg~~~~~~~~~~~~vv~k~--~~--------------~e~~Gvl~~~~~dg~~~vvEy~E~~----- 314 (486)
T 2yqc_A 257 DNCLVKVADP-IFIGFAIAKKFDLATKVVRKR--DA--------------NESVGLIVLDQDNQKPCVIEYSEIS----- 314 (486)
T ss_dssp TBTTCCTTCH-HHHHHHHHHTCSEEEEEEECC--ST--------------TCCCCEEEEETTTTEEEEECGGGSC-----
T ss_pred CCceeeccCH-HHHHHHHHcCCCEEEEEEEcC--CC--------------CCceeEEEEEecCCCEEEEEEecCC-----
Confidence 8433 4454 478889999999998766532 11 24567776542 343 234443221
Q ss_pred ccccHHHHhh-cCc--ceeccCcccceeeeeCHHHHHHHHhc
Q 017849 188 TRIRKSILRA-VGQ--MDIRADLMDAHMYAFNRSVLQEVLDQ 226 (365)
Q Consensus 188 ~~i~~~~l~~-~~~--~~~~~~l~~~giyi~s~~vl~~~~~~ 226 (365)
...... .+. -....+..++++|+|+.++|...+.+
T Consensus 315 ----~~~~~~~~~~~~~~~~~~~~Ni~~~~~~l~~L~~~l~~ 352 (486)
T 2yqc_A 315 ----QELANKKDPQDSSKLFLRAANIVNHYYSVEFLNKMIPK 352 (486)
T ss_dssp ----HHHHHCEETTEEEEESSCEEEEEEEEEEHHHHHHHHHH
T ss_pred ----HHHhhcccccccccccccceeEEEEEEeHHHHHHHHHh
Confidence 111111 010 12234688999999999999874443
No 56
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=99.21 E-value=7.1e-10 Score=104.71 Aligned_cols=192 Identities=9% Similarity=0.125 Sum_probs=122.5
Q ss_pred cceEEEEcCCCCCCCCCCCCCCCCceecee---CCcchHHHHHHHHHh-------------CCCCeEEEEecCcchHHHH
Q 017849 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPV---ANRPVLSYVLEQLEL-------------SNIKDLIVVVEGADAALRV 65 (365)
Q Consensus 2 ~~~avIlA~G~g~rl~pL~t~~~pK~llpv---~gkplI~~~L~~l~~-------------~gi~~v~vv~~~~~~~~~i 65 (365)
++.+|+||||.|||| +...||+++|| .|||++++.++.+.+ .++.-+ |.++... .+.+
T Consensus 35 kvavvlLAGG~GTRL----G~~~PK~~~~Vgl~~gks~lq~~~e~i~~lq~l~~~~~~~~~~~Ip~~-IMtS~~t-~e~t 108 (405)
T 3oc9_A 35 KTALITPAGGQGSRL----GFEHPKGMFVLPFEIPKSIFQMTSERLLRLQELASEYSHQKNVMIHWF-LMTNEET-IEEI 108 (405)
T ss_dssp CEEEEEECCSBCTTT----TCCSBGGGCEECSSSCEEHHHHHHHHHHHHHHHHHHHHCCSCCCCEEE-EEECTTT-HHHH
T ss_pred ceEEEEecCCCcccc----cCCCCCccccccCCCCCcHHHHHHHHHHHHHHHHhhhccccCCCCCEE-EEeCCcc-HHHH
Confidence 457899999999999 77899999999 899999999988853 467644 4444333 3578
Q ss_pred HHHHHh--hhc-CCcceEEEEc---------------------CCCCChHHHHHHHH-----HHcC---CCcEEEEeCCc
Q 017849 66 GGWISA--AYV-DRLHVEVATV---------------------PEDVGTAGALRAIA-----HHLT---AKDVLVVSGDL 113 (365)
Q Consensus 66 ~~~~~~--~~~-~~~~v~i~~~---------------------~~~~gt~~al~~~~-----~~i~---~~~~lv~~~D~ 113 (365)
.+++++ ++. +.-.+.+..| ..+.|+|+.+.... +.+. .+++++.+.|.
T Consensus 109 ~~~f~~~~~fGl~~~~i~~f~Q~~~P~i~~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~l~~~Gieyi~v~nvDN 188 (405)
T 3oc9_A 109 NNYFKEHQYFGLSSEQIHCFPQGMLPVVDFNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEFMNEKGIKYSVAHNVDN 188 (405)
T ss_dssp HHHHHHTGGGGSCTTSEEEEECCEEECBCTTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHHHHHHTCCEEEEECTTB
T ss_pred HHHHHhCcccCCCccceEEEeeCceeEEecCCCeecCCCCccccccCCChHHHHHHHHCCcHHHHHhcCCEEEEEEeCCC
Confidence 888875 222 1112333221 12478887666432 2221 25788888897
Q ss_pred -ccCCChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCCccCCCCCCcceEEEEcCCCcEEEEeeccccccccccccH
Q 017849 114 -VSDVPPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQFLLHIATGAELEKDTRIRK 192 (365)
Q Consensus 114 -i~~~~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~l~~~~~~~~~ek~~~i~~ 192 (365)
+.....-.++..|.++++++++-+.+... | .+..|++......-.++.+.+.+.. ...
T Consensus 189 ~L~~~~Dp~~lg~~~~~~~d~~~kvv~k~~--~--------------dek~Gvl~~~dg~~~vvEysei~~e-~e~---- 247 (405)
T 3oc9_A 189 ILCKDVDPNMIGYMDLLQSEICIKIVKKGF--K--------------EEKVGVLVKEQERIKVVEYTELTDE-LNK---- 247 (405)
T ss_dssp TTCCSSCHHHHHHHHHTTCSEEEEEEECCS--T--------------TCSCCEEEEETTEEEEECGGGCCTT-TTC----
T ss_pred cccccCCHHHHHHHHHcCCCEEEEEEECCC--C--------------CCccceEEEECCeeEEEEEeeCCHH-Hhh----
Confidence 77777778999999999999987765431 1 2456777643221223444432211 000
Q ss_pred HHHhhcCcceeccCcccceeeeeCHHHHHHHH
Q 017849 193 SILRAVGQMDIRADLMDAHMYAFNRSVLQEVL 224 (365)
Q Consensus 193 ~~l~~~~~~~~~~~l~~~giyi~s~~vl~~~~ 224 (365)
+.+.-....+..+.++|+|+.++|..+.
T Consensus 248 ----~~~~g~l~fn~~Ni~~h~fs~~fL~~i~ 275 (405)
T 3oc9_A 248 ----QLSNGEFIYNCGHISINGYSTSFLEKAA 275 (405)
T ss_dssp ----BCTTSCBSSCEEEEEEEEEEHHHHHHHT
T ss_pred ----cCCCCceeeccceeEeeecCHHHHHHhh
Confidence 0011122345678899999999998775
No 57
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=97.73 E-value=4e-05 Score=66.34 Aligned_cols=103 Identities=17% Similarity=0.182 Sum_probs=73.8
Q ss_pred ceEEEEc--CCCCCCCCCCCCCCCCceeceeCCcchHHHHHHHHHhCCCCeE-EEEecCcchHHHHHHHHHhhhcCCcce
Q 017849 3 FQVVVLA--GGTSKKLVPLVSKEVPKALLPVANRPVLSYVLEQLELSNIKDL-IVVVEGADAALRVGGWISAAYVDRLHV 79 (365)
Q Consensus 3 ~~avIlA--~G~g~rl~pL~t~~~pK~llpv~gkplI~~~L~~l~~~gi~~v-~vv~~~~~~~~~i~~~~~~~~~~~~~v 79 (365)
|.+||++ |...|||.|. .........++|||+|+++.+..++++.+ +++++... +. .+ .++
T Consensus 4 ~~~vip~k~g~~KtRL~~~----l~~~~~~~l~~~ll~~vl~~l~~~~~~~v~vvv~~~~~----~~----~~----~~~ 67 (211)
T 2i5e_A 4 MRAVIPYKKAGAKSRLSPV----LSLQEREEFVELMLNQVISSLKGAGIEQVDILSPSVYG----LE----EM----TEA 67 (211)
T ss_dssp CEEEEECCCTTTTGGGTTT----SCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESSCTT----CS----SC----CSS
T ss_pred eEEEEEeCCCCCccccCcc----CCHHHHHHHHHHHHHHHHHHHHHcCCceEEEEEcCcHH----HH----hh----cCC
Confidence 6789999 7677888432 22333335679999999999999999888 88877431 11 11 256
Q ss_pred EEEEcCCCCChHHHHHHHHHHcCCCcEEEEeCCc--ccCCChHHHHH
Q 017849 80 EVATVPEDVGTAGALRAIAHHLTAKDVLVVSGDL--VSDVPPGAVTA 124 (365)
Q Consensus 80 ~i~~~~~~~gt~~al~~~~~~i~~~~~lv~~~D~--i~~~~l~~~l~ 124 (365)
.++.++ .|.+++++.+.+.+ .+.++++.||+ +....+..+++
T Consensus 68 ~~v~~~--~gl~~sl~~a~~~~-~~~vlvi~~D~P~l~~~~i~~l~~ 111 (211)
T 2i5e_A 68 RVLLDE--KDLNEALNRYLKEA-EEPVLIVMADLPLLSPEHIKEISS 111 (211)
T ss_dssp EEEECC--SCHHHHHHHHHHHC-CSCEEEECSCCTTCCHHHHHHHTT
T ss_pred EEEECC--CCHHHHHHHHHHhc-CCCEEEEcCCcCCCCHHHHHHHHc
Confidence 666654 88899999998776 57899999994 55556666665
No 58
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=97.49 E-value=0.003 Score=61.29 Aligned_cols=192 Identities=13% Similarity=0.098 Sum_probs=107.2
Q ss_pred cceEEEEcCCCCCCCCCCCCCCCCceeceeC-CcchHHHHHHHHHhC----CC-CeEEEEecCcchHHHHHHHHHhhhcC
Q 017849 2 DFQVVVLAGGTSKKLVPLVSKEVPKALLPVA-NRPVLSYVLEQLELS----NI-KDLIVVVEGADAALRVGGWISAAYVD 75 (365)
Q Consensus 2 ~~~avIlA~G~g~rl~pL~t~~~pK~llpv~-gkplI~~~L~~l~~~----gi-~~v~vv~~~~~~~~~i~~~~~~~~~~ 75 (365)
++.+|+||||.|||| +...||.++|+. |+++++..++.+... |. -..+|.++... .+...+++++...-
T Consensus 127 kvavvlLaGGlGTRL----G~~~PK~~i~V~sgktflql~~eqI~~l~~~~g~~IPl~IMTS~~T-~~~T~~~f~k~~~f 201 (528)
T 3r3i_A 127 KLVVVKLNGGLGTSM----GCKGPKSLIGVRNENTFLDLTVQQIEHLNKTYNTDVPLVLMNSFNT-DEDTKKILQKYNHC 201 (528)
T ss_dssp TEEEEEECCCBCTTT----TCSSBGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTT-HHHHHSSCGGGTTS
T ss_pred ceEEEEeCCCCcccc----CCCCCccceecCCCCcHHHHHHHHHHHHHHHhCCCCCEEEEeccch-hHHHHHHHHhcCcc
Confidence 356789999999999 778999999996 889999999998664 42 24566666543 34677777652110
Q ss_pred CcceEEEEc----------------------C-----CCCChHH---HHHHH--HHHcC---CCcEEEEeCCccc-CCCh
Q 017849 76 RLHVEVATV----------------------P-----EDVGTAG---ALRAI--AHHLT---AKDVLVVSGDLVS-DVPP 119 (365)
Q Consensus 76 ~~~v~i~~~----------------------~-----~~~gt~~---al~~~--~~~i~---~~~~lv~~~D~i~-~~~l 119 (365)
+..+.+..| + .+.|.|+ +|... ++.+. .+++.+.+.|.+. ..|.
T Consensus 202 g~~V~~F~Q~~~P~i~~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~Gieyi~v~nvDNlga~vDp 281 (528)
T 3r3i_A 202 RVKIYTFNQSRYPRINKESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEGKEYIFVSNIDNLGATVDL 281 (528)
T ss_dssp SCCEEEEECCCBCCEETTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTTCCEEEEEETTBTTCCCCH
T ss_pred CCCeEEEEeCCeeeEecCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcCCEEEEEEccCCcccccCH
Confidence 112222211 0 1234443 33221 23222 3678888889543 3454
Q ss_pred HHHHHHHHhc----CCeEEEEEeeeccCCCccCCCCCCccCCCCCCcceEEEEcCCCc-EEEEeeccccccccccccHHH
Q 017849 120 GAVTAAHRRH----DAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTKQ-FLLHIATGAELEKDTRIRKSI 194 (365)
Q Consensus 120 ~~~l~~h~~~----~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~~-~l~~~~~~~~~ek~~~i~~~~ 194 (365)
. ++..+..+ ++++.+-+.+.. .| .+.-|++... +|+ .++.+.+-+ ...
T Consensus 282 ~-~Lg~~~~~~~~~~~d~~~kVv~Kt--~~--------------dek~Gvl~~~-dGk~~vvEyseip---------~e~ 334 (528)
T 3r3i_A 282 Y-ILNHLMNPPNGKRCEFVMEVTNKT--RA--------------DVKGGTLTQY-EGKLRLVEIAQVP---------KAH 334 (528)
T ss_dssp H-HHHHHSSCSSSCCCSEEEEECCCC--TT--------------CCSSCEEECS-SSSCEEECTTSSC---------GGG
T ss_pred H-HHHHHHhcccccCCcEEEEEeEcc--cc--------------CCcccEEEEE-CCeEEEEEecCCC---------hhH
Confidence 3 56666665 777766443321 11 1222444332 333 233333211 111
Q ss_pred HhhcCcceeccCcccceeeeeCHHHHHHHHhc
Q 017849 195 LRAVGQMDIRADLMDAHMYAFNRSVLQEVLDQ 226 (365)
Q Consensus 195 l~~~~~~~~~~~l~~~giyi~s~~vl~~~~~~ 226 (365)
...... .....+.|+...+|+-+.|..+++.
T Consensus 335 ~~~~~g-~~~f~~~Ntnnlw~~L~~L~~v~~~ 365 (528)
T 3r3i_A 335 VDEFKS-VSKFKIFNTNNLWISLAAVKRLQEQ 365 (528)
T ss_dssp TTTSSC-SSSCCCCEEEEEEEEHHHHHHHHHT
T ss_pred hhccCC-cccCCeEEEEEEEEEHHHHHHHHHh
Confidence 111111 1234567888999999999888765
No 59
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=96.89 E-value=0.057 Score=51.93 Aligned_cols=132 Identities=14% Similarity=0.137 Sum_probs=83.5
Q ss_pred ceEEEEcCCCCCCCCCCCCCCCCceecee-CCcchHHHHHHHHHhC----CC-CeEEEEecCcchHHHHHHHHHh--hhc
Q 017849 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPV-ANRPVLSYVLEQLELS----NI-KDLIVVVEGADAALRVGGWISA--AYV 74 (365)
Q Consensus 3 ~~avIlA~G~g~rl~pL~t~~~pK~llpv-~gkplI~~~L~~l~~~----gi-~~v~vv~~~~~~~~~i~~~~~~--~~~ 74 (365)
+.+|+||||.|||| ....||.++|+ .|+++++..++++... |+ -..+|.++... .+...+++++ ++.
T Consensus 77 vavvlLaGGlGTRL----G~~~pKg~~~v~sgksflql~~eqI~~l~~~~~~~iPl~IMTS~~T-~~~T~~~~~k~~~Fg 151 (484)
T 3gue_A 77 AVVLKLNGGLGTGM----GLNGPKSLLQVKNGQTFLDFTALQLEHFRQVRNCNVPFMLMNSFST-SGETKNFLRKYPTLY 151 (484)
T ss_dssp EEEEEEECCCCGGG----TCSSCGGGSEEETTEEHHHHHHHHHHHHHHHHTCCCCEEEEECTTT-HHHHHHHGGGCHHHH
T ss_pred cEEEEEcCCccccc----CCCCCceeeecCCCCcHHHHHHHHHHHHHHHcCCCceEEEECCcch-hHHHHHHHHhCcccC
Confidence 45788999999999 77899999999 6789999999888652 32 24667776554 3577777764 221
Q ss_pred -CCcceEEEE-----------------cC------CCCChHHHHHHH-----HHHcC---CCcEEEEeCCcccC-CChHH
Q 017849 75 -DRLHVEVAT-----------------VP------EDVGTAGALRAI-----AHHLT---AKDVLVVSGDLVSD-VPPGA 121 (365)
Q Consensus 75 -~~~~v~i~~-----------------~~------~~~gt~~al~~~-----~~~i~---~~~~lv~~~D~i~~-~~l~~ 121 (365)
..-.+.+.. .. .+.|.|+..... ++.+. .+++.+.+.|.+.. .|. .
T Consensus 152 l~~~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Gieyi~v~~vDNL~a~~Dp-~ 230 (484)
T 3gue_A 152 EVFDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLDV-R 230 (484)
T ss_dssp TTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCEEEEEETTCTTCCCCH-H
T ss_pred CCccceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEEEEEEcCCCcccccCH-H
Confidence 110111111 00 134555433222 22222 36788888896444 343 4
Q ss_pred HHHHHHhcCCeEEEEEeee
Q 017849 122 VTAAHRRHDAVVTAMICSV 140 (365)
Q Consensus 122 ~l~~h~~~~a~~t~l~~~~ 140 (365)
++..+..+++++.+-+.+.
T Consensus 231 ~lG~~~~~~~d~~~kvv~K 249 (484)
T 3gue_A 231 LLDYMHEKQLGFLMEVCRR 249 (484)
T ss_dssp HHHHHHHTTCSEEEEEEEC
T ss_pred HHHHHHhcCCCEEEEEEEC
Confidence 7788888899988766553
No 60
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=96.16 E-value=6.4e-05 Score=71.02 Aligned_cols=74 Identities=12% Similarity=0.048 Sum_probs=41.7
Q ss_pred EEEEeCCcccCC--ChHHHHHHHHhcCCeEEEEEeeeccCCCccCCCCCCccCCCCCCcceEEEEcCCC-cEEEEeeccc
Q 017849 106 VLVVSGDLVSDV--PPGAVTAAHRRHDAVVTAMICSVPVSGLSEAGSSGAKDKTKKPGRYNIIGMDPTK-QFLLHIATGA 182 (365)
Q Consensus 106 ~lv~~~D~i~~~--~l~~~l~~h~~~~a~~t~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~d~~~-~~l~~~~~~~ 182 (365)
=|+-.+|.++.+ ++.++++.|. +|+.. .+ ++..+++..+++.+ ..+ .|.+
T Consensus 13 ~~~~~~dhiy~m~~~l~~i~~~h~-----~tl~g--~~-----------------~~~~~Gv~~ld~a~~g~I-~F~e-- 65 (374)
T 2iu8_A 13 GLVPRGSHMSQSTYSLEQLADFLK-----VEFQG--NG-----------------ATLLSGVEEIEEAKTAHI-TFLD-- 65 (374)
T ss_dssp --------CCSCCEEHHHHHHHTT-----CEEES--CT-----------------TCEECEECCTTTCCTTEE-EECC--
T ss_pred CcccCccccccCcCcHHHHHHhhC-----CEEEC--CC-----------------cceEEEEeccccCCCCeE-EEEe--
Confidence 466778999987 8999999885 24432 11 24567888887532 344 5543
Q ss_pred cccccccccHHHHhhcCcceeccCcccceeeeeCHHHHH
Q 017849 183 ELEKDTRIRKSILRAVGQMDIRADLMDAHMYAFNRSVLQ 221 (365)
Q Consensus 183 ~~ek~~~i~~~~l~~~~~~~~~~~l~~~giyi~s~~vl~ 221 (365)
|+... ....+.++|+|+|+++++.
T Consensus 66 ---kPk~~------------~~~~~~~aGiyI~~~~~l~ 89 (374)
T 2iu8_A 66 ---NEKYA------------KHLKSSEAGAIIISRTQFQ 89 (374)
T ss_dssp ---SSSTH------------HHHHTCCCSEEEEEHHHHH
T ss_pred ---Cchhh------------hhhhcCCcEEEEeChhHhh
Confidence 32110 1125779999999999774
No 61
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=96.11 E-value=0.005 Score=60.86 Aligned_cols=131 Identities=15% Similarity=0.161 Sum_probs=83.5
Q ss_pred ceEEEEcCCCCCCCCCCCCCCCCceeceeC---CcchHHHHHHHHHhC-CC-CeEEEEecCcchHHHHHHHHHhhhcCCc
Q 017849 3 FQVVVLAGGTSKKLVPLVSKEVPKALLPVA---NRPVLSYVLEQLELS-NI-KDLIVVVEGADAALRVGGWISAAYVDRL 77 (365)
Q Consensus 3 ~~avIlA~G~g~rl~pL~t~~~pK~llpv~---gkplI~~~L~~l~~~-gi-~~v~vv~~~~~~~~~i~~~~~~~~~~~~ 77 (365)
+..|+||||.|||| ....||.++|++ |++++++.++++.+. |. -..+|.++... .+...++++.+-.++.
T Consensus 115 vavvllaGGlGTRL----G~~~pK~~lpv~~~s~ks~lql~~e~i~~~~g~~iPl~IMTS~~T-~~~T~~~~~~fgl~~~ 189 (630)
T 3ogz_A 115 TVFVLVAGGLGERL----GYSSIKVSLPVETATNTTYLAYYLRWAQRVGGKEVPFVIMTSDDT-HDRTLQLLRELQLEVP 189 (630)
T ss_dssp EEEEEECCCEEGGG----TEEEEGGGSBSCTTTCCBHHHHHHHHHHHHHCTTCCEEEEECTTT-HHHHHHHHHHTTCCCT
T ss_pred ceEEEecCCccccc----CCCCCcccceecCCCCCcHHHHHHHHHHHHhCCCCcEEEEecccc-hHHHHHHHHHhCCCcc
Confidence 45789999999999 788999999997 899999999999643 43 24566666544 3577888876322222
Q ss_pred ceEEEEc----------------C------CCCChHHHHHH-----------------------HHHHc---CCCcEEEE
Q 017849 78 HVEVATV----------------P------EDVGTAGALRA-----------------------IAHHL---TAKDVLVV 109 (365)
Q Consensus 78 ~v~i~~~----------------~------~~~gt~~al~~-----------------------~~~~i---~~~~~lv~ 109 (365)
.+.+..| + .+.|.|+.... .++.+ ..+++.+.
T Consensus 190 ~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~v~ 269 (630)
T 3ogz_A 190 NLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDVHSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIVFI 269 (630)
T ss_dssp TEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHHHHHHHHCBC--------------CCBHHHHHHHTTCCEEEEE
T ss_pred cEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHHHHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEEEE
Confidence 3333211 0 02455543322 22222 13577888
Q ss_pred eCCccc--CCChHHHHHHHHhcCCeEEEEEee
Q 017849 110 SGDLVS--DVPPGAVTAAHRRHDAVVTAMICS 139 (365)
Q Consensus 110 ~~D~i~--~~~l~~~l~~h~~~~a~~t~l~~~ 139 (365)
+.|.+. ..|. .++..+..+++++.+-+.+
T Consensus 270 ~vDN~L~~~~DP-~~lG~~~~~~~d~~~kvv~ 300 (630)
T 3ogz_A 270 QDTNAGATITIP-ISLALSAEHSLDMNFTCIP 300 (630)
T ss_dssp CTTBTTHHHHHH-HHHHHHHHTTCSEEEEEEC
T ss_pred ccCCccccccCH-HHhHHHHhcCCCEEEEEEE
Confidence 888633 2333 3677788889998776554
No 62
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=92.43 E-value=0.97 Score=38.50 Aligned_cols=105 Identities=11% Similarity=0.076 Sum_probs=66.1
Q ss_pred eceeCCc-chHHHHHHHHHhCCCC--eEEEEecCcchHHHHHHHHHhhhcCCcceEEEEcCCCCChHHHHHHHHHHcCCC
Q 017849 28 LLPVANR-PVLSYVLEQLELSNIK--DLIVVVEGADAALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHLTAK 104 (365)
Q Consensus 28 llpv~gk-plI~~~L~~l~~~gi~--~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i~~~~~~~gt~~al~~~~~~i~~~ 104 (365)
.+|.-|+ ..|..+|+.+.+.... +|+|+-+... +...+.++.+......+.++. ....|.+.+.-.+++....+
T Consensus 10 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiIvvDd~S~--d~t~~~~~~~~~~~~~i~~i~-~~n~G~~~a~N~g~~~a~g~ 86 (240)
T 3bcv_A 10 IVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESP--DNCPKICDDYAAQYPNIKVIH-KKNAGLGMACNSGLDVATGE 86 (240)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSSSSEEEEEEECCCS--SSHHHHHHHHHHHCSSEEEEE-CCCCCHHHHHHHHHHHCCSS
T ss_pred EEecCCCHHHHHHHHHHHHhCcCCCeEEEEEECCCC--cCHHHHHHHHHhhCCCEEEEE-CCCCChHHHHHHHHHHcCCC
Confidence 4555555 7899999999876543 5666644221 112222322211112466664 45688888888888888778
Q ss_pred cEEEEeCCcccCCC-hHHHHHHHHhcCCeEEE
Q 017849 105 DVLVVSGDLVSDVP-PGAVTAAHRRHDAVVTA 135 (365)
Q Consensus 105 ~~lv~~~D~i~~~~-l~~~l~~h~~~~a~~t~ 135 (365)
.++++.+|.+...+ +..+++...+.+.++.+
T Consensus 87 ~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~ 118 (240)
T 3bcv_A 87 YVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVF 118 (240)
T ss_dssp EEEECCTTCCCCTTHHHHHHHHHHHHTCSEEE
T ss_pred EEEEECCCCcCCHHHHHHHHHHHHhcCCCEEE
Confidence 89999999665544 78888887765666543
No 63
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=92.37 E-value=1.7 Score=37.43 Aligned_cols=99 Identities=8% Similarity=0.042 Sum_probs=66.4
Q ss_pred eceeCCc-chHHHHHHHHHhCCCC--eEEEEecCcchHHHHHHHHHhhhcCCcceEEEEcC--------CCCChHHHHHH
Q 017849 28 LLPVANR-PVLSYVLEQLELSNIK--DLIVVVEGADAALRVGGWISAAYVDRLHVEVATVP--------EDVGTAGALRA 96 (365)
Q Consensus 28 llpv~gk-plI~~~L~~l~~~gi~--~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i~~~~--------~~~gt~~al~~ 96 (365)
.+|.-|+ ..|..+|+.+.+.... +|+|+-+... +...+.+..+.. ...+.++..+ ...|.+.+.-.
T Consensus 6 iIp~yn~~~~l~~~l~Sl~~q~~~~~eiivvDd~S~--d~t~~~~~~~~~-~~~i~~i~~~~~~~~~~~~n~G~~~a~N~ 82 (255)
T 1qg8_A 6 IMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSN--EETLNVIRPFLN-DNRVRFYQSDISGVKERTEKTRYAALINQ 82 (255)
T ss_dssp EEEESSCTTTHHHHHHHHHTCSCCCEEEEEEECSCC--HHHHHHHGGGGG-STTEEEEECCCCSHHHHHSSCHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHHHHhccCCceEEEEEECCCC--chHHHHHHHHhh-cCCEEEEecccccccccccccCHHHHHHH
Confidence 3555554 7899999999876543 5666654332 344455554322 3457777666 56788888888
Q ss_pred HHHHcCCCcEEEEeCCcccCC-ChHHHHHHHHhc
Q 017849 97 IAHHLTAKDVLVVSGDLVSDV-PPGAVTAAHRRH 129 (365)
Q Consensus 97 ~~~~i~~~~~lv~~~D~i~~~-~l~~~l~~h~~~ 129 (365)
+++....+.++++.+|.+... -+..+++.+.+.
T Consensus 83 gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~ 116 (255)
T 1qg8_A 83 AIEMAEGEYITYATDDNIYMPDRLLKMVRELDTH 116 (255)
T ss_dssp HHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHC
T ss_pred HHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhC
Confidence 888877788999999965544 478888877654
No 64
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=90.49 E-value=0.85 Score=39.76 Aligned_cols=87 Identities=13% Similarity=0.114 Sum_probs=58.0
Q ss_pred cchHHHHHHHHHhCCCCeEEEEecCcchHHHH--HHHHHhhhcCCcceEEEEcCCCCChHHHHHHHHHHc---CCCcEEE
Q 017849 34 RPVLSYVLEQLELSNIKDLIVVVEGADAALRV--GGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHL---TAKDVLV 108 (365)
Q Consensus 34 kplI~~~L~~l~~~gi~~v~vv~~~~~~~~~i--~~~~~~~~~~~~~v~i~~~~~~~gt~~al~~~~~~i---~~~~~lv 108 (365)
++|+.++++.+..++...++++++.... ..+ ..+.. .++.+..+ ...|.+.+|+.+...+ ..+.+++
T Consensus 37 ~~ll~~tl~~~~~~~~~~vvvvt~~~~~-~~~~~~~~~~------~~~~~~~q-~~~gLg~rl~~a~~~~~~~~~~~vli 108 (242)
T 3cgx_A 37 RHFVQDMLQGLARLHADLHICYVPGDAD-LPEKFKAWLG------PQHMFAAQ-QGLDLGERMKHAMQKAFDDGYDRVVL 108 (242)
T ss_dssp HHHHHHHHHHHTTSSSEEEEEECCCCTT-HHHHHHHHHC------TTSEEEEC-CSSSHHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEEcCCchh-hhhhhhhhcc------CCcEEecC-CCCCHHHHHHHHHHHHHhCCCCeEEE
Confidence 6899999999999988767666654321 111 23321 13434333 4578889999887654 2356999
Q ss_pred EeCC--cccCCChHHHHHHHHh
Q 017849 109 VSGD--LVSDVPPGAVTAAHRR 128 (365)
Q Consensus 109 ~~~D--~i~~~~l~~~l~~h~~ 128 (365)
+.+| .+...++..+++....
T Consensus 109 igaD~P~L~~~~l~~a~~~l~~ 130 (242)
T 3cgx_A 109 MGSDIPDYPCELVQKALNDLQH 130 (242)
T ss_dssp ECSSCTTCCHHHHHHHHHHTTT
T ss_pred EcCCCCCCCHHHHHHHHHHhcc
Confidence 9999 4777778888876543
No 65
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=90.08 E-value=0.091 Score=45.86 Aligned_cols=31 Identities=19% Similarity=0.149 Sum_probs=22.0
Q ss_pred eEEEEEEecCCce-EEEeCCHHHHHHHhHHHhhh
Q 017849 300 HKCCVYIASNSKY-CVRLNSIQAFMDINRDVIGE 332 (365)
Q Consensus 300 ~~~~~~~~~~~~y-~~ri~~~~~Y~~~n~~~l~~ 332 (365)
.++++|.. .+| .....++..|+++|+.+|..
T Consensus 39 ~~~~~~~~--~~~~~g~w~di~~~l~~n~~~l~~ 70 (240)
T 3r8y_A 39 VQAFVNKK--SGVLFGEWSEIKTILDENSKYIVD 70 (240)
T ss_dssp SEEEECSS--EEEEEEEHHHHHHHHHHTTTTEEE
T ss_pred ceEEEcCC--CeEEEccHHHHHHHHHhccceech
Confidence 56666644 566 55567777899999998853
No 66
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=87.86 E-value=5.3 Score=38.06 Aligned_cols=103 Identities=10% Similarity=0.086 Sum_probs=68.5
Q ss_pred eceeCCc--chHHHHHHHHHhCCC----CeEEEEecCcc---hHHHHHHHHHhhhcCCcceEEEEcCCCCChHHHHHHHH
Q 017849 28 LLPVANR--PVLSYVLEQLELSNI----KDLIVVVEGAD---AALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIA 98 (365)
Q Consensus 28 llpv~gk--plI~~~L~~l~~~gi----~~v~vv~~~~~---~~~~i~~~~~~~~~~~~~v~i~~~~~~~gt~~al~~~~ 98 (365)
.+|.-|. ..|..+|+.+.+... .+|+||-+... ..+.+.++.... ...+.++..+...|-+.|...++
T Consensus 34 IIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~---~~~v~vi~~~~n~G~~~a~N~g~ 110 (472)
T 1xhb_A 34 VIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKL---KVPVHVIRMEQRSGLIRARLKGA 110 (472)
T ss_dssp EEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSS---SSCEEEEECSSCCCHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHC---CCcEEEEECCCCCChHHHHHHHH
Confidence 3566665 589999999977653 26777754321 112233333211 11477777777789999988888
Q ss_pred HHcCCCcEEEEeCCcccC-CChHHHHHHHHhcCCeE
Q 017849 99 HHLTAKDVLVVSGDLVSD-VPPGAVTAAHRRHDAVV 133 (365)
Q Consensus 99 ~~i~~~~~lv~~~D~i~~-~~l~~~l~~h~~~~a~~ 133 (365)
+....+.++++.+|.+.. .-+..+++.+.+....+
T Consensus 111 ~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~ 146 (472)
T 1xhb_A 111 AVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTV 146 (472)
T ss_dssp HHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEE
T ss_pred HhccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEE
Confidence 888778899999996554 55888988887655444
No 67
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=83.85 E-value=6.2 Score=38.82 Aligned_cols=102 Identities=10% Similarity=0.009 Sum_probs=65.6
Q ss_pred ceeCCc--chHHHHHHHHHhCCC-C---eEEEEecCcchHHHHHHHHHhhhcCCcceEEEEcCCCCChHHHHHHHHHHcC
Q 017849 29 LPVANR--PVLSYVLEQLELSNI-K---DLIVVVEGADAALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHLT 102 (365)
Q Consensus 29 lpv~gk--plI~~~L~~l~~~gi-~---~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i~~~~~~~gt~~al~~~~~~i~ 102 (365)
+|+-|. ..|..+|+.+.+... . +|+||-+.... ..+.+.++.+......+.++..+...|-+.|...+++...
T Consensus 118 Ip~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D-~tl~~~l~~~~~~~~~v~vi~~~~n~G~~~A~N~G~~~A~ 196 (570)
T 2d7i_A 118 IPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDR-EHLKKPLEDYMALFPSVRILRTKKREGLIRTRMLGASVAT 196 (570)
T ss_dssp EEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCC-GGGTHHHHHHHTTSTTEEEEECSSCCCHHHHHHHHHHHCC
T ss_pred EEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCc-HHHHHHHHHHHHhCCeEEEEECCCCCCHHHHHHHHHHhcC
Confidence 566675 488889988866543 2 67777543211 1112223222111125777776777899999888888877
Q ss_pred CCcEEEEeCCcccC-CChHHHHHHHHhcCC
Q 017849 103 AKDVLVVSGDLVSD-VPPGAVTAAHRRHDA 131 (365)
Q Consensus 103 ~~~~lv~~~D~i~~-~~l~~~l~~h~~~~a 131 (365)
.+.++++.+|.+.. .-+..+++...+...
T Consensus 197 gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~ 226 (570)
T 2d7i_A 197 GDVITFLDSHCEANVNWLPPLLDRIARNRK 226 (570)
T ss_dssp SSEEEECCSSEEECTTCSHHHHHHHHHCTT
T ss_pred CCEEEEEcCCccccccHHHHHHHHHHhCCC
Confidence 77889999996554 458888888776543
No 68
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=82.41 E-value=8.8 Score=36.88 Aligned_cols=101 Identities=12% Similarity=0.031 Sum_probs=67.6
Q ss_pred eceeCCc-c-hHHHHHHHHHhCCCC----eEEEEecCcchHHHHHHHHHhhhcCCcceEEEEcCCCCChHHHHHHHHHHc
Q 017849 28 LLPVANR-P-VLSYVLEQLELSNIK----DLIVVVEGADAALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHL 101 (365)
Q Consensus 28 llpv~gk-p-lI~~~L~~l~~~gi~----~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i~~~~~~~gt~~al~~~~~~i 101 (365)
.+|.-|. . .|..+|+.+.+.-.. +|+||-+.... ..+...+.. ...+.++..+...|.+.|+..+++..
T Consensus 71 IIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D-~t~~~~~~~----~~~v~vi~~~~n~G~~~A~N~G~~~A 145 (501)
T 2ffu_A 71 VITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSND-PEDGALLGK----IEKVRVLRNDRREGLMRSRVRGADAA 145 (501)
T ss_dssp EEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSC-THHHHGGGG----BTTEEEEECSSCCHHHHHHHHHHHHC
T ss_pred EEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCc-hHHHHHHhc----CCCEEEEECCCCcCHHHHHHHHHHhc
Confidence 4666676 4 899999998665332 77777543221 233333322 12577776666788888988888888
Q ss_pred CCCcEEEEeCCccc-CCChHHHHHHHHhcCCeE
Q 017849 102 TAKDVLVVSGDLVS-DVPPGAVTAAHRRHDAVV 133 (365)
Q Consensus 102 ~~~~~lv~~~D~i~-~~~l~~~l~~h~~~~a~~ 133 (365)
..+.++++.+|... +.-+..+++...+....+
T Consensus 146 ~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~v 178 (501)
T 2ffu_A 146 QAKVLTFLDSHCECNEHWLEPLLERVAEDRTRV 178 (501)
T ss_dssp CSSEEEECCSSEEECTTCHHHHHHHHHHCTTEE
T ss_pred CCCEEEEECCCcccCccHHHHHHHHHHhCCCeE
Confidence 77778899999654 455899998887765543
No 69
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=75.38 E-value=31 Score=33.93 Aligned_cols=103 Identities=14% Similarity=0.124 Sum_probs=66.8
Q ss_pred eceeCCc-chHHHHHHHHHhCC---CCeEEEEecCcchHHHHHHHHHhhhcCCcceEEEEcCC-CCChHHHHHHHHHHcC
Q 017849 28 LLPVANR-PVLSYVLEQLELSN---IKDLIVVVEGADAALRVGGWISAAYVDRLHVEVATVPE-DVGTAGALRAIAHHLT 102 (365)
Q Consensus 28 llpv~gk-plI~~~L~~l~~~g---i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i~~~~~-~~gt~~al~~~~~~i~ 102 (365)
++|.-|+ ..|..+|+.+.... --+|+|+-+... +...+.+... ....++.++..+. ..|-+.++-.+++...
T Consensus 98 iIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~--d~t~~~~~~~-~~~~~i~~i~~~~~~~g~~~a~N~g~~~a~ 174 (625)
T 2z86_A 98 VIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSK--ENIEEIVREF-ESLLNIKYVRQKDYGYQLCAVRNLGLRAAK 174 (625)
T ss_dssp EEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCS--SCHHHHHHTT-TTTSCEEEEEECCCSCCHHHHHHHHHHHCC
T ss_pred EEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCc--hhHHHHHHHh-hhcCCeEEEEeCCCCcchhHHHHHHHHhCC
Confidence 4666676 78999999997763 346777765332 2334444432 2223566665543 3467888888888777
Q ss_pred CCcEEEEeCCcccCCC-hHHHHHHHHhcCCeE
Q 017849 103 AKDVLVVSGDLVSDVP-PGAVTAAHRRHDAVV 133 (365)
Q Consensus 103 ~~~~lv~~~D~i~~~~-l~~~l~~h~~~~a~~ 133 (365)
.+.++++.+|.+...+ +..++..+.+....+
T Consensus 175 g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~ 206 (625)
T 2z86_A 175 YNYVAILDCDMAPNPLWVQSYMELLAVDDNVA 206 (625)
T ss_dssp SSEEEEECTTEEECTTHHHHHHHHHHHCTTEE
T ss_pred cCEEEEECCCCCCCHHHHHHHHHHHhcCCceE
Confidence 7789999999766544 778888776654433
No 70
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=71.77 E-value=17 Score=35.82 Aligned_cols=99 Identities=11% Similarity=0.111 Sum_probs=62.5
Q ss_pred eceeCCc-chHHHHHHHHHhCCCC--eEEEEecCcchHHHHHHHHHhhhcCCcceEEEEcCCCCChHHHHHHHHHHcCCC
Q 017849 28 LLPVANR-PVLSYVLEQLELSNIK--DLIVVVEGADAALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAHHLTAK 104 (365)
Q Consensus 28 llpv~gk-plI~~~L~~l~~~gi~--~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i~~~~~~~gt~~al~~~~~~i~~~ 104 (365)
++|.-|. ..|..+|+.+.+.... +|+|+-+... +...+.+.+.......+.++. ....|.+.++-.+++....+
T Consensus 380 ii~~yn~~~~l~~~l~s~~~q~~~~~eiivvdd~S~--d~t~~~~~~~~~~~~~i~~~~-~~n~G~~~a~n~g~~~a~g~ 456 (625)
T 2z86_A 380 YIPAYNCSKYIVRCVESALNQTITDLEVCICDDGST--DDTLRILQEHYANHPRVRFIS-QKNKGIGSASNTAVRLCRGF 456 (625)
T ss_dssp EEEESSCTTTHHHHHHHHHSSSCCSEEEEEEEESCS--SSHHHHHHHHHTTCTTEEEEE-ECCCCHHHHHHHHHHHCCSS
T ss_pred EEeCCCCHHHHHHHHHHHHhCcCCCeEEEEEECcCC--hhHHHHHHHHHhhCCcEEEEe-CCCCCHHHHHHHHHHhcCCC
Confidence 3555565 8999999999776543 5666654221 122333333221112455654 45678899988888887777
Q ss_pred cEEEEeCCcccCC-ChHHHHHHHHhc
Q 017849 105 DVLVVSGDLVSDV-PPGAVTAAHRRH 129 (365)
Q Consensus 105 ~~lv~~~D~i~~~-~l~~~l~~h~~~ 129 (365)
.++++.+|.+... -+..+++.+.+.
T Consensus 457 ~i~~ld~D~~~~~~~l~~~~~~~~~~ 482 (625)
T 2z86_A 457 YIGQLDSDDFLEPDAVELCLDEFRKD 482 (625)
T ss_dssp EEEECCTTCEECTTHHHHHHHHHHHC
T ss_pred EEEEECCCcccChhHHHHHHHHHHhC
Confidence 8899999965544 477788776543
No 71
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=68.39 E-value=45 Score=29.78 Aligned_cols=105 Identities=18% Similarity=0.184 Sum_probs=63.1
Q ss_pred eceeCCc-chHHHHHHHHHhCC---CCeEEEEecCcchHHHHHHHHHhhhcCCc--ceEEEE-cCCCCChHHHHHHHHHH
Q 017849 28 LLPVANR-PVLSYVLEQLELSN---IKDLIVVVEGADAALRVGGWISAAYVDRL--HVEVAT-VPEDVGTAGALRAIAHH 100 (365)
Q Consensus 28 llpv~gk-plI~~~L~~l~~~g---i~~v~vv~~~~~~~~~i~~~~~~~~~~~~--~v~i~~-~~~~~gt~~al~~~~~~ 100 (365)
.+|.-|. ..|..+|+.+.+.. ..+|+|+-+... +...+.+.+.. .+. .+.++. .....|-+.++..+++.
T Consensus 53 iIp~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~--D~t~~~~~~~~-~~~~~~~~~~~~~~~n~G~~~a~n~g~~~ 129 (329)
T 3ckj_A 53 VLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGST--DDTEIRAVAAG-ARVVSREQALPEVPIRPGKGEALWRSLAA 129 (329)
T ss_dssp EEEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCC--SSHHHHHHHTT-CEEEEHHHHCTTSCCCCSHHHHHHHHHHH
T ss_pred EEeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCC--chHHHHHHHhh-hhhccceeeeccCCCCCCHHHHHHHHHHh
Confidence 3666665 78999999997653 257777764321 12233343321 110 011111 24568888999888888
Q ss_pred cCCCcEEEEeCCcc-cC-CChHHHHHHHHh-cCCeEEE
Q 017849 101 LTAKDVLVVSGDLV-SD-VPPGAVTAAHRR-HDAVVTA 135 (365)
Q Consensus 101 i~~~~~lv~~~D~i-~~-~~l~~~l~~h~~-~~a~~t~ 135 (365)
...+.++++.+|.+ .. ..+..+++...+ .+.++..
T Consensus 130 a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~ 167 (329)
T 3ckj_A 130 SRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVK 167 (329)
T ss_dssp CCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEE
T ss_pred CCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEE
Confidence 77778899999976 54 457888877543 3445443
No 72
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=67.27 E-value=0.58 Score=42.96 Aligned_cols=23 Identities=13% Similarity=0.176 Sum_probs=20.5
Q ss_pred eEEEeCCHHHHHHHhHHHhhhhc
Q 017849 312 YCVRLNSIQAFMDINRDVIGEAN 334 (365)
Q Consensus 312 y~~ri~~~~~Y~~~n~~~l~~~~ 334 (365)
-..||.++++|..++++.|.+|.
T Consensus 25 ~l~ri~al~~f~~v~~g~lgg~i 47 (334)
T 2pig_A 25 LLRQVIAVTDFNDVKAGTSGGWV 47 (334)
T ss_dssp EEEEEEESSCBTTBCTTCEEEEE
T ss_pred EEEEEEEeeccccccCCccCCeE
Confidence 47899999999999999999884
No 73
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=58.04 E-value=69 Score=32.78 Aligned_cols=99 Identities=20% Similarity=0.223 Sum_probs=62.2
Q ss_pred eceeCCcc--hHHHHHHHHHhCCCC----eEEEEecCcchHHH-------H-------HHHHHhhhcCCcceEEEEcCCC
Q 017849 28 LLPVANRP--VLSYVLEQLELSNIK----DLIVVVEGADAALR-------V-------GGWISAAYVDRLHVEVATVPED 87 (365)
Q Consensus 28 llpv~gkp--lI~~~L~~l~~~gi~----~v~vv~~~~~~~~~-------i-------~~~~~~~~~~~~~v~i~~~~~~ 87 (365)
++|.-|.+ ++..+|+.+.+.... +|+|+.+.... +. + ...++.. ....++.++..++.
T Consensus 145 iIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD-~T~~~~d~~i~~~~~~~~~~l~~~-~~~~~v~~i~~~~~ 222 (802)
T 4hg6_A 145 LVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTD-QRCMSPDPELAQKAQERRRELQQL-CRELGVVYSTRERN 222 (802)
T ss_dssp EEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHH-HHHTCSSHHHHHHHHHHHHHHHHH-HHHHTCEEEECSSC
T ss_pred EEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCc-cccccCCHHHHHHHHhhhHHHHHH-HHhcCcEEEEecCC
Confidence 57777763 569999999776543 57777653211 11 0 1112111 11235666654443
Q ss_pred -CChHHHHHHHHHHcCCCcEEEEeCCcccCCC-hHHHHHHHHh
Q 017849 88 -VGTAGALRAIAHHLTAKDVLVVSGDLVSDVP-PGAVTAAHRR 128 (365)
Q Consensus 88 -~gt~~al~~~~~~i~~~~~lv~~~D~i~~~~-l~~~l~~h~~ 128 (365)
.|-++++..+.+....+.++++.+|.+...+ +..++..+.+
T Consensus 223 ~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~ 265 (802)
T 4hg6_A 223 EHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVE 265 (802)
T ss_dssp CSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhc
Confidence 6778888888888877889999999766554 7888887754
No 74
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=57.73 E-value=3.9 Score=34.04 Aligned_cols=25 Identities=16% Similarity=0.379 Sum_probs=15.4
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
...+.+++|.++++||+++.||+++
T Consensus 139 v~IG~~~~I~~gv~IG~~~vIgags 163 (195)
T 3nz2_A 139 VWIGGNVVINQGVTIGARSVVAANS 163 (195)
T ss_dssp CEECTTCEECTTCEECTTCEECTTC
T ss_pred CEEcCCCEECCCCEECCCCEECCCC
Confidence 3344556666666666677776665
No 75
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=56.43 E-value=4.1 Score=33.67 Aligned_cols=25 Identities=16% Similarity=0.344 Sum_probs=15.7
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
...+.+++|.++++||+++.||+++
T Consensus 139 v~IG~~~~I~~gv~IG~~~vIgags 163 (188)
T 3srt_A 139 VWIGGGVIITPGITIGDNVVIGAGS 163 (188)
T ss_dssp CEECTTCEECTTCEECSSEEECTTC
T ss_pred cEEcCCCEECCCcEECCCCEECCCC
Confidence 3344556666666777777777665
No 76
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=56.24 E-value=38 Score=31.35 Aligned_cols=104 Identities=14% Similarity=0.134 Sum_probs=64.0
Q ss_pred eceeCCc-chHHHHHHHHHh----CC-CCeEEEEecCcchHHHHHHHHHhhhcCCcceEEEE-------cCCCCChHHHH
Q 017849 28 LLPVANR-PVLSYVLEQLEL----SN-IKDLIVVVEGADAALRVGGWISAAYVDRLHVEVAT-------VPEDVGTAGAL 94 (365)
Q Consensus 28 llpv~gk-plI~~~L~~l~~----~g-i~~v~vv~~~~~~~~~i~~~~~~~~~~~~~v~i~~-------~~~~~gt~~al 94 (365)
.+|.-|. ..|..+|+.+.. .. ..+|+||-+... +...+.+... ...++. .+...|-+.++
T Consensus 99 VIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgSt--D~T~~i~~~~-----~~~v~~~~~~~i~~~~n~G~g~A~ 171 (387)
T 3f1y_A 99 VLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSE--DGTAGVAASH-----GAEVYSENELMSGYGDAHGKGDAM 171 (387)
T ss_dssp EEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCS--SSHHHHHHHT-----TCEEEEGGGTTGGGCSCCSHHHHH
T ss_pred EEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCC--ccHHHHHHHh-----CchhcccceeEecCCccCCHHHHH
Confidence 4666665 677777777754 22 457777765321 1223334332 122221 23468889999
Q ss_pred HHHHHHcCCCcEEEEeCCcc-c-CCChHHHHHHHHhc-CCeEEEEEe
Q 017849 95 RAIAHHLTAKDVLVVSGDLV-S-DVPPGAVTAAHRRH-DAVVTAMIC 138 (365)
Q Consensus 95 ~~~~~~i~~~~~lv~~~D~i-~-~~~l~~~l~~h~~~-~a~~t~l~~ 138 (365)
..+.+....+.++++.+|.. . +..+..+++...+. ++++.....
T Consensus 172 n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~ 218 (387)
T 3f1y_A 172 WRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAY 218 (387)
T ss_dssp HHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEE
T ss_pred HHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEee
Confidence 98888776677888899976 4 44578888877654 566655543
No 77
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=55.92 E-value=45 Score=33.32 Aligned_cols=98 Identities=18% Similarity=0.220 Sum_probs=59.3
Q ss_pred ceeCCc-chHHHHHHHHHhC-----CCCeEEEEecCcch---HHHHHHHHHhhhcCCcceEEEEcCCCCChHHHHHHHHH
Q 017849 29 LPVANR-PVLSYVLEQLELS-----NIKDLIVVVEGADA---ALRVGGWISAAYVDRLHVEVATVPEDVGTAGALRAIAH 99 (365)
Q Consensus 29 lpv~gk-plI~~~L~~l~~~-----gi~~v~vv~~~~~~---~~~i~~~~~~~~~~~~~v~i~~~~~~~gt~~al~~~~~ 99 (365)
+|.-|+ ..|..+|+.+.+. ...+|+||=+.... ...+.+.+.... ..+.++..+ ..|-+.+.-.++.
T Consensus 186 IptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~---~~I~vI~~~-N~G~a~a~N~Gl~ 261 (657)
T 4fix_A 186 IPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLG---SRLSIHDQP-NLGGSGGYSRVMY 261 (657)
T ss_dssp CCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHG---GGEEEEECC-CCHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcC---CCEEEEECC-CCCHHHHHHHHHH
Confidence 444454 7999999998764 23467777553211 113334443321 257777655 6777766655554
Q ss_pred Hc----CCCcEEEEeCCcccCC-ChHHHHHHHHhcC
Q 017849 100 HL----TAKDVLVVSGDLVSDV-PPGAVTAAHRRHD 130 (365)
Q Consensus 100 ~i----~~~~~lv~~~D~i~~~-~l~~~l~~h~~~~ 130 (365)
.. ..+.+++++.|.+... -+..+++.+....
T Consensus 262 ~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~ 297 (657)
T 4fix_A 262 EALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAK 297 (657)
T ss_dssp HHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBS
T ss_pred HHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCC
Confidence 43 3467999999976554 4788888876653
No 78
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=55.69 E-value=4.4 Score=33.52 Aligned_cols=25 Identities=20% Similarity=0.460 Sum_probs=15.7
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
...+.+++|.++++||+++.||+++
T Consensus 141 v~IG~~~~I~~gv~IG~~~vIgags 165 (190)
T 3hjj_A 141 VWVGGGAIINPGVSIGDNAVIASGA 165 (190)
T ss_dssp CEECTTCEECTTCEECTTCEECTTC
T ss_pred CEECCCCEECCCCEECCCCEECCCC
Confidence 3444556666666677777777665
No 79
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=55.26 E-value=4.6 Score=33.31 Aligned_cols=24 Identities=21% Similarity=0.476 Sum_probs=14.6
Q ss_pred CCCCCCccCCCceeCCcccccCCC
Q 017849 341 FSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 341 ~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
..+.+++|.++++||+++.||+++
T Consensus 136 ~Ig~~a~I~~gv~IG~~~vIgags 159 (182)
T 1ocx_A 136 WIGGRAVINPGVTIGDNVVVASGA 159 (182)
T ss_dssp EECTTCEECTTCEECTTCEECTTC
T ss_pred EECCCCEECCCcEECCCCEECCCC
Confidence 334455666666666666666665
No 80
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=54.55 E-value=4.7 Score=33.94 Aligned_cols=24 Identities=13% Similarity=0.458 Sum_probs=14.6
Q ss_pred CCCCCCccCCCceeCCcccccCCC
Q 017849 341 FSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 341 ~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
..+.+++|.++++||+++.||+++
T Consensus 139 ~IG~~a~I~~gv~IG~~~vIgags 162 (203)
T 1krr_A 139 WIGSHVVINPGVTIGDNSVIGAGS 162 (203)
T ss_dssp EECTTCEECTTCEECTTCEECTTC
T ss_pred EECCCCEEeCCeEECCCCEECCCC
Confidence 334455666666666666666665
No 81
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=54.20 E-value=7.4 Score=35.79 Aligned_cols=20 Identities=10% Similarity=0.046 Sum_probs=10.9
Q ss_pred eEEEeCCHHHHHHHhHHHhh
Q 017849 312 YCVRLNSIQAFMDINRDVIG 331 (365)
Q Consensus 312 y~~ri~~~~~Y~~~n~~~l~ 331 (365)
.+..+.++...|....+++.
T Consensus 78 ~~i~~~~p~~~~~~~~~~~~ 97 (357)
T 4e79_A 78 NFIIVDNPYLAFAILTHVFD 97 (357)
T ss_dssp EEEECSCHHHHHHHHHTTSS
T ss_pred cEEEECCHHHHHHHHHHHhc
Confidence 44566777655544444443
No 82
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=53.99 E-value=5.2 Score=33.38 Aligned_cols=25 Identities=8% Similarity=0.283 Sum_probs=16.2
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
...+.+++|.++++||+++.||+++
T Consensus 137 v~IG~~~~I~~gv~IG~~~vIgags 161 (199)
T 3ftt_A 137 TWFGGHVAVLPGVTIGEGSVIGAGS 161 (199)
T ss_dssp EEECTTCEECTTCEECTTCEECTTC
T ss_pred cEEcCCCEECCCCEECCCCEECCCC
Confidence 3344556666777777777777765
No 83
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=53.86 E-value=4.9 Score=33.18 Aligned_cols=24 Identities=17% Similarity=0.480 Sum_probs=13.9
Q ss_pred CCCCCCccCCCceeCCcccccCCC
Q 017849 341 FSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 341 ~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
..+.+++|.++++||+++.||+++
T Consensus 138 ~IG~~~~I~~gv~IG~~~vIgags 161 (185)
T 2p2o_A 138 WIGGRAVINPGVTIGDNAVIASGA 161 (185)
T ss_dssp EECTTCEECTTCEECTTCEECTTC
T ss_pred EECCCCEECCCCEECCCCEECCCC
Confidence 334455556666666666666654
No 84
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=53.40 E-value=4.8 Score=33.35 Aligned_cols=24 Identities=8% Similarity=0.051 Sum_probs=13.6
Q ss_pred CCCCCCccCCCceeCCcccccCCC
Q 017849 341 FSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 341 ~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
....++.|.++|+||+++.||+++
T Consensus 110 ~Ig~~~~I~~gv~IG~~~~Igags 133 (194)
T 3tv0_A 110 VIESKAYVGRNVILTSGCIIGACC 133 (194)
T ss_dssp EECTTCEECTTEEECSSCEECTTC
T ss_pred eecceeeECCeEEECCCCEECCCC
Confidence 334455556666666666666554
No 85
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=52.54 E-value=5.3 Score=33.92 Aligned_cols=25 Identities=12% Similarity=0.349 Sum_probs=15.5
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
...+.+++|.++++||+++.||+++
T Consensus 126 v~IG~~a~I~~gv~IG~gavIgags 150 (220)
T 4hur_A 126 VWIGRDVTIMPGVKIGDGAIIAAEA 150 (220)
T ss_dssp CEECTTCEECTTCEECTTCEECTTC
T ss_pred cEECCCCEEeCCCEECCCCEEcCCC
Confidence 3344556666666666667776665
No 86
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=52.13 E-value=5.4 Score=33.63 Aligned_cols=25 Identities=16% Similarity=0.367 Sum_probs=15.1
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
...+.++.|.++++||+++.||+++
T Consensus 118 v~IG~~a~I~~gv~IG~~~iIgags 142 (212)
T 3eev_A 118 VWIGTEAMIMPGVKIGHGAIIASRS 142 (212)
T ss_dssp CEECTTCEECTTCEECTTCEECTTC
T ss_pred CEECCCCEEcCCCEECCCCEECCCC
Confidence 3444555666666666666666665
No 87
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=46.33 E-value=7.6 Score=32.89 Aligned_cols=25 Identities=12% Similarity=0.305 Sum_probs=15.7
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
...+.++.|.++|+||+++.||+++
T Consensus 117 v~IG~~a~I~~gv~Ig~~~~Igags 141 (212)
T 1xat_A 117 VWIGTEAMFMPGVRVGHGAIIGSRA 141 (212)
T ss_dssp CEECTTCEECTTCEECTTCEECTTC
T ss_pred CEECCCCEEeCCCEECCCCEECCCC
Confidence 3444556666666777777777665
No 88
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=45.66 E-value=22 Score=29.25 Aligned_cols=19 Identities=5% Similarity=0.088 Sum_probs=11.2
Q ss_pred EEEeCCHHHHHHHhHHHhh
Q 017849 313 CVRLNSIQAFMDINRDVIG 331 (365)
Q Consensus 313 ~~ri~~~~~Y~~~n~~~l~ 331 (365)
..-+.+...+++....+.+
T Consensus 51 ~iaig~~~~r~~~~~~l~~ 69 (194)
T 3bfp_A 51 FIAIGNNEIRKKIYQKISE 69 (194)
T ss_dssp EECCCCHHHHHHHHHHHHT
T ss_pred EEEeCCHHHHHHHHHHHHH
Confidence 3445566666666666654
No 89
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=44.54 E-value=7.8 Score=32.17 Aligned_cols=25 Identities=8% Similarity=0.026 Sum_probs=16.1
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
...++++.|+.+|.|.++++||.++
T Consensus 133 v~IG~~v~IG~~~~I~~gv~IG~~~ 157 (195)
T 3nz2_A 133 IVIEDDVWIGGNVVINQGVTIGARS 157 (195)
T ss_dssp EEECTTCEECTTCEECTTCEECTTC
T ss_pred eEECCCCEEcCCCEECCCCEECCCC
Confidence 3445566666666776777777665
No 90
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=43.90 E-value=26 Score=31.80 Aligned_cols=18 Identities=0% Similarity=-0.057 Sum_probs=10.7
Q ss_pred EEeCCHHHHHHHhHHHhh
Q 017849 314 VRLNSIQAFMDINRDVIG 331 (365)
Q Consensus 314 ~ri~~~~~Y~~~n~~~l~ 331 (365)
..+.++...+.....++.
T Consensus 74 ~~~~~p~~~~~~~~~~~~ 91 (341)
T 3eh0_A 74 LVVKNPYLTYARMAQILD 91 (341)
T ss_dssp EECSCHHHHHHHHHHHHC
T ss_pred EEeCCHHHHHHHHHHHhc
Confidence 556777765555555554
No 91
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=43.17 E-value=9 Score=31.85 Aligned_cols=25 Identities=20% Similarity=0.328 Sum_probs=14.8
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
...+.+++|.++++||+++.||+++
T Consensus 141 v~IG~~~~I~~gv~Ig~~~~Ig~gs 165 (205)
T 3vbi_A 141 VIIGAHSIIFPNVVIGEGVAVGAMS 165 (205)
T ss_dssp CEECTTCEECSSCEECTTCEECTTC
T ss_pred CEECCCCEEcCCCEECCCCEEcCCC
Confidence 3444555666666666666666654
No 92
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=42.60 E-value=8.9 Score=31.59 Aligned_cols=25 Identities=16% Similarity=0.104 Sum_probs=16.9
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
...++++.|+++|.|.++++||.++
T Consensus 131 v~IGd~v~IG~~~~I~~gv~IG~~~ 155 (185)
T 2p2o_A 131 VVIGHNVWIGGRAVINPGVTIGDNA 155 (185)
T ss_dssp EEECSSCEECTTCEECTTCEECTTC
T ss_pred eEEcCCeEECCCCEECCCCEECCCC
Confidence 4445667777777777777777765
No 93
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=42.26 E-value=10 Score=31.19 Aligned_cols=25 Identities=8% Similarity=0.024 Sum_probs=16.0
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
...++++.|+++|.|.++++||.++
T Consensus 135 v~IG~~v~IG~~~~I~~gv~IG~~~ 159 (190)
T 3hjj_A 135 VKIGNNVWVGGGAIINPGVSIGDNA 159 (190)
T ss_dssp EEECTTCEECTTCEECTTCEECTTC
T ss_pred eEECCCCEECCCCEECCCCEECCCC
Confidence 3445666666666666677777665
No 94
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=41.94 E-value=8.3 Score=34.76 Aligned_cols=27 Identities=19% Similarity=0.182 Sum_probs=16.5
Q ss_pred CCCCCCCCccCCCceeCCcccccCCCC
Q 017849 339 YNFSAQNNIIHPSAELGSKTTVSSSLC 365 (365)
Q Consensus 339 ~~~~~~~~~i~~~~~i~~~~~ig~~~~ 365 (365)
....+.++.|.++++||+++.||++++
T Consensus 257 ~V~IGaga~Il~gv~IGd~a~IGagsv 283 (310)
T 3f1x_A 257 DVIVYSNATILGRVTIGKGATVGGNIW 283 (310)
T ss_dssp TCEECTTCEEESSCEECTTCEECSSCE
T ss_pred CcEEcCCCEECCCcEECCCCEECCCCE
Confidence 344455566666666677777776653
No 95
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=41.73 E-value=9.2 Score=31.51 Aligned_cols=25 Identities=12% Similarity=0.033 Sum_probs=16.0
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
...++++.|+.+|+|.++++||.++
T Consensus 133 v~IG~~v~IG~~~~I~~gv~IG~~~ 157 (188)
T 3srt_A 133 VKIGDNVWIGGGVIITPGITIGDNV 157 (188)
T ss_dssp EEECSSCEECTTCEECTTCEECSSE
T ss_pred cEECCCcEEcCCCEECCCcEECCCC
Confidence 3445666666666666667776665
No 96
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=41.20 E-value=11 Score=30.92 Aligned_cols=25 Identities=16% Similarity=0.106 Sum_probs=15.8
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
...++++.|+++|.|.++++||+++
T Consensus 129 v~IG~~v~Ig~~a~I~~gv~IG~~~ 153 (182)
T 1ocx_A 129 VTIGNNVWIGGRAVINPGVTIGDNV 153 (182)
T ss_dssp EEECTTCEECTTCEECTTCEECTTC
T ss_pred eEEeCCeEECCCCEECCCcEECCCC
Confidence 3445566666666666666777665
No 97
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=41.15 E-value=10 Score=31.83 Aligned_cols=28 Identities=11% Similarity=0.083 Sum_probs=19.3
Q ss_pred CCCCCCCCCccCCCceeCCcccccCCCC
Q 017849 338 GYNFSAQNNIIHPSAELGSKTTVSSSLC 365 (365)
Q Consensus 338 ~~~~~~~~~~i~~~~~i~~~~~ig~~~~ 365 (365)
+....++++.|+.+|.|.++++||.+|+
T Consensus 110 g~v~IG~~v~IG~~a~I~~gv~IG~~~i 137 (212)
T 3eev_A 110 GDTIIGHDVWIGTEAMIMPGVKIGHGAI 137 (212)
T ss_dssp CCEEECSSCEECTTCEECTTCEECTTCE
T ss_pred CCeEECCCCEECCCCEEcCCCEECCCCE
Confidence 3445566777777777777777777763
No 98
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=40.66 E-value=11 Score=32.00 Aligned_cols=27 Identities=7% Similarity=-0.012 Sum_probs=18.8
Q ss_pred CCCCCCCCCccCCCceeCCcccccCCC
Q 017849 338 GYNFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 338 ~~~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
+....++++.|+.+|.|.++++||.++
T Consensus 118 g~v~IG~~v~IG~~a~I~~gv~IG~ga 144 (220)
T 4hur_A 118 GDIEIGNDVWIGRDVTIMPGVKIGDGA 144 (220)
T ss_dssp CCEEECSSCEECTTCEECTTCEECTTC
T ss_pred CCeEECCCcEECCCCEEeCCCEECCCC
Confidence 444556677777777777777777766
No 99
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=40.65 E-value=8.7 Score=34.23 Aligned_cols=25 Identities=8% Similarity=0.130 Sum_probs=14.7
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
...+.++.|.++++||+++.||+++
T Consensus 223 v~IGaga~Il~gv~IG~~a~IGags 247 (287)
T 3mc4_A 223 VLIGAGAKILGNIQVGQCSKIAAGS 247 (287)
T ss_dssp CEECTTCEEESSCEECTTCEECTTC
T ss_pred CEECCCCEECCCcEECCCCEECCCC
Confidence 3444555555666666666666655
No 100
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=39.81 E-value=12 Score=31.41 Aligned_cols=23 Identities=13% Similarity=0.118 Sum_probs=14.1
Q ss_pred CCCCCccCCCceeCCcccccCCC
Q 017849 342 SAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 342 ~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
.+.++.|+.+|.|.++++||.++
T Consensus 134 IGd~v~IG~~a~I~~gv~IG~~~ 156 (203)
T 1krr_A 134 IGNNVWIGSHVVINPGVTIGDNS 156 (203)
T ss_dssp ECTTCEECTTCEECTTCEECTTC
T ss_pred ECCCeEECCCCEEeCCeEECCCC
Confidence 34556666666666666666665
No 101
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=39.36 E-value=10 Score=32.81 Aligned_cols=25 Identities=16% Similarity=0.214 Sum_probs=14.7
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
.+.+.++.|.++++||+++.||+++
T Consensus 170 v~IG~~a~I~~gv~IG~~~~Igags 194 (252)
T 3jqy_B 170 VWVGRNVSIMKGVSVGSGSVIGYGS 194 (252)
T ss_dssp CEECSSEEECTTCEECTTCEECTTC
T ss_pred cEECCCCEECCCCEECCCCEECCCC
Confidence 3444555566666666666666654
No 102
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=39.17 E-value=23 Score=32.71 Aligned_cols=20 Identities=0% Similarity=-0.150 Sum_probs=11.5
Q ss_pred eEEEeCCHHHHHHHhHHHhh
Q 017849 312 YCVRLNSIQAFMDINRDVIG 331 (365)
Q Consensus 312 y~~ri~~~~~Y~~~n~~~l~ 331 (365)
-+..+.++...+.....++.
T Consensus 94 ~~l~~~~p~~~~~~~~~~~~ 113 (372)
T 3pmo_A 94 TALVVANPYLAYASLSHLFD 113 (372)
T ss_dssp CEEECSCHHHHHHHHHGGGC
T ss_pred cEEEECCHHHHHHHHHHHhc
Confidence 35666777666654444543
No 103
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=38.79 E-value=14 Score=30.36 Aligned_cols=11 Identities=18% Similarity=0.283 Sum_probs=4.5
Q ss_pred CCCCCccCCCc
Q 017849 342 SAQNNIIHPSA 352 (365)
Q Consensus 342 ~~~~~~i~~~~ 352 (365)
.+++++|+++|
T Consensus 110 IG~~~~I~~~~ 120 (194)
T 3bfp_A 110 IEKGVILNTSS 120 (194)
T ss_dssp ECTTCEECTTC
T ss_pred ECCCCEECCCC
Confidence 34444444333
No 104
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=38.47 E-value=10 Score=31.58 Aligned_cols=26 Identities=8% Similarity=-0.068 Sum_probs=17.2
Q ss_pred CCCCCCCCccCCCceeCCcccccCCC
Q 017849 339 YNFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 339 ~~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
....++++.|+.+|.|.++++||.++
T Consensus 130 ~v~IG~~v~IG~~~~I~~gv~IG~~~ 155 (199)
T 3ftt_A 130 PIHIGSNTWFGGHVAVLPGVTIGEGS 155 (199)
T ss_dssp CEEECSSEEECTTCEECTTCEECTTC
T ss_pred CeEEcCCcEEcCCCEECCCCEECCCC
Confidence 34455666777777777777777765
No 105
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=38.40 E-value=12 Score=33.06 Aligned_cols=21 Identities=5% Similarity=0.072 Sum_probs=9.5
Q ss_pred CCCccCCCceeCCcccccCCC
Q 017849 344 QNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 344 ~~~~i~~~~~i~~~~~ig~~~ 364 (365)
.++.|.++++||+++.||+++
T Consensus 188 ~~a~I~~gv~IG~~avIgags 208 (276)
T 3gos_A 188 ARSEVVEGVIVEEGSVISMGV 208 (276)
T ss_dssp TTCEECTTCEECTTCEECTTC
T ss_pred CCCEECCCCEECCCCEECCCC
Confidence 344444444444444444443
No 106
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=38.29 E-value=39 Score=28.15 Aligned_cols=18 Identities=11% Similarity=0.123 Sum_probs=8.7
Q ss_pred EEeCCHHHHHHHhHHHhh
Q 017849 314 VRLNSIQAFMDINRDVIG 331 (365)
Q Consensus 314 ~ri~~~~~Y~~~n~~~l~ 331 (365)
.-+.+.....++.+.+..
T Consensus 76 iAIg~~~~R~~i~~~l~~ 93 (220)
T 4ea9_A 76 VAIGDNRLRQKLGRKARD 93 (220)
T ss_dssp ECCCCHHHHHHHHHHHHH
T ss_pred EecCCHHHHHHHHHHHHh
Confidence 334455445555555443
No 107
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=38.17 E-value=15 Score=32.24 Aligned_cols=33 Identities=6% Similarity=0.042 Sum_probs=25.8
Q ss_pred HHHHcCCCcEE--EEeCCcccCCChHHHHHHHHhc
Q 017849 97 IAHHLTAKDVL--VVSGDLVSDVPPGAVTAAHRRH 129 (365)
Q Consensus 97 ~~~~i~~~~~l--v~~~D~i~~~~l~~~l~~h~~~ 129 (365)
+......+++| ++++|++...+|.+.+..|...
T Consensus 13 a~~~~~~EP~L~~~l~~~IL~~~~l~~aLa~~la~ 47 (267)
T 1ssq_A 13 AKELAENEPMLASFFHSTILKHQNLGGALSYLLAN 47 (267)
T ss_dssp HHHHHHHCHHHHHHHHHHTTTSSSHHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHhcccccCCCCHHHHHHHHHhc
Confidence 33444457888 8899999999999999998764
No 108
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=37.83 E-value=12 Score=31.98 Aligned_cols=17 Identities=18% Similarity=0.370 Sum_probs=7.6
Q ss_pred ccCCCceeCCcccccCC
Q 017849 347 IIHPSAELGSKTTVSSS 363 (365)
Q Consensus 347 ~i~~~~~i~~~~~ig~~ 363 (365)
+|+++|.||++++||++
T Consensus 135 ~I~~~~~IG~~~~I~~~ 151 (240)
T 3r8y_A 135 VLGGRATVGKNCHVGAG 151 (240)
T ss_dssp EECTTCEECTTCEECTT
T ss_pred EECCCCEECCCcEECCC
Confidence 33344444444444444
No 109
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=37.75 E-value=13 Score=30.52 Aligned_cols=15 Identities=20% Similarity=0.321 Sum_probs=5.3
Q ss_pred ccCCCceeCCccccc
Q 017849 347 IIHPSAELGSKTTVS 361 (365)
Q Consensus 347 ~i~~~~~i~~~~~ig 361 (365)
+|+.+|+|.+++.|+
T Consensus 128 ~IgagsvV~~~~~Ip 142 (194)
T 3tv0_A 128 IIGACCNLNTFEVIP 142 (194)
T ss_dssp EECTTCEECCCEEEC
T ss_pred EECCCCEECCCcEEC
Confidence 333333333333333
No 110
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=37.68 E-value=13 Score=33.43 Aligned_cols=14 Identities=14% Similarity=0.332 Sum_probs=5.2
Q ss_pred cCCCceeCCccccc
Q 017849 348 IHPSAELGSKTTVS 361 (365)
Q Consensus 348 i~~~~~i~~~~~ig 361 (365)
|+++|+||++|+|+
T Consensus 213 IG~~~~IG~~v~I~ 226 (310)
T 3f1x_A 213 IGATSIIGNNVKLY 226 (310)
T ss_dssp ECTTCEECSSCEEE
T ss_pred ECCceEEcCCCEEC
Confidence 33333333333333
No 111
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=36.28 E-value=76 Score=27.37 Aligned_cols=25 Identities=12% Similarity=0.084 Sum_probs=21.1
Q ss_pred CcchHHHHHHHHHhCCCCeEEEEec
Q 017849 33 NRPVLSYVLEQLELSNIKDLIVVVE 57 (365)
Q Consensus 33 gkplI~~~L~~l~~~gi~~v~vv~~ 57 (365)
+.|-|.-+|+.|...|+++|+|+.-
T Consensus 63 ~~P~i~~al~~l~~~G~~~ivV~Pl 87 (269)
T 2xvy_A 63 AAPSPAEALAGMAEEGFTHVAVQSL 87 (269)
T ss_dssp CCCCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCHHHHHHHHHHCCCCEEEEEec
Confidence 6789999999999999999888753
No 112
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=35.88 E-value=14 Score=33.45 Aligned_cols=21 Identities=5% Similarity=0.102 Sum_probs=9.7
Q ss_pred CCCccCCCceeCCcccccCCC
Q 017849 344 QNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 344 ~~~~i~~~~~i~~~~~ig~~~ 364 (365)
.++.|.+++.||+++.||+++
T Consensus 229 ~~a~I~~gv~IG~g~vIgags 249 (316)
T 3tk8_A 229 ARSEVVEGVIVEENSVISMGV 249 (316)
T ss_dssp TTCEECTTCEECTTCEECTTC
T ss_pred CCCEEcCCCEECCCCEEcCCC
Confidence 344444444444444444443
No 113
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=35.83 E-value=14 Score=30.19 Aligned_cols=25 Identities=16% Similarity=0.101 Sum_probs=16.3
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
...+.++.|.++++||+++.||+++
T Consensus 109 v~IG~~~~I~~g~~Ig~~~~Igags 133 (192)
T 3mqg_A 109 ATLGANCTVVCGATIGRYAFVGAGA 133 (192)
T ss_dssp CEECTTCEECTTCEECTTCEECTTC
T ss_pred cEECCCCEECCCCEECCCCEEcCCC
Confidence 3445566667777777777777765
No 114
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=35.70 E-value=14 Score=33.19 Aligned_cols=11 Identities=18% Similarity=0.018 Sum_probs=4.9
Q ss_pred HHHHHHHHHcC
Q 017849 92 GALRAIAHHLT 102 (365)
Q Consensus 92 ~al~~~~~~i~ 102 (365)
+++..+++.+.
T Consensus 53 ~~~~~~~~~l~ 63 (304)
T 3eg4_A 53 EAVEQSLILLD 63 (304)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 44444444443
No 115
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=35.67 E-value=7.8 Score=39.31 Aligned_cols=97 Identities=14% Similarity=0.156 Sum_probs=0.0
Q ss_pred ceeCCc-chHHHHHHHHHhCCCC--eEEEEecCcchHHHHHHHHHhhhcC-CcceEEEEcCCCCChHHHHHHHHHHcCCC
Q 017849 29 LPVANR-PVLSYVLEQLELSNIK--DLIVVVEGADAALRVGGWISAAYVD-RLHVEVATVPEDVGTAGALRAIAHHLTAK 104 (365)
Q Consensus 29 lpv~gk-plI~~~L~~l~~~gi~--~v~vv~~~~~~~~~i~~~~~~~~~~-~~~v~i~~~~~~~gt~~al~~~~~~i~~~ 104 (365)
+|.-|+ ..|..+|+.+.+.... +|+||-+.. .+...+.+.++... ...+.++..+...|.+.+.-.+++....+
T Consensus 8 Ip~yN~~~~L~~~L~Sll~Qt~~~~EIIVVDDgS--tD~t~~il~~~~~~~~~~i~~i~~~~n~G~~~arN~gi~~A~gd 85 (729)
T 3l7i_A 8 VTYYNAEEYITGCLESIKQQRTQDFNLIIVNDGS--TDQSKKLMDEAIKDYDKNIRFIDLDENSGHAHARNIALEEVETP 85 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEcCCCHHHHHHHHHHHHhCCCCCeEEEEEECCC--CCcHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHhccCC
Confidence 444444 6777777777655433 455554322 12333334332111 12455555555678778877777766667
Q ss_pred cEEEEeCCccc-CCChHHHHHHHH
Q 017849 105 DVLVVSGDLVS-DVPPGAVTAAHR 127 (365)
Q Consensus 105 ~~lv~~~D~i~-~~~l~~~l~~h~ 127 (365)
.++++.+|.+. +.-+..+++...
T Consensus 86 yI~flD~Dd~~~p~~l~~l~~~l~ 109 (729)
T 3l7i_A 86 YFMFLDADDELASYAITFYLEKFN 109 (729)
T ss_dssp ------------------------
T ss_pred EEEEECCCCCCChhHHHHHHHHhc
Confidence 88999999544 444777777765
No 116
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=34.60 E-value=19 Score=32.03 Aligned_cols=31 Identities=10% Similarity=0.069 Sum_probs=25.5
Q ss_pred HHcCCCcEE--EEeCCcccCCChHHHHHHHHhc
Q 017849 99 HHLTAKDVL--VVSGDLVSDVPPGAVTAAHRRH 129 (365)
Q Consensus 99 ~~i~~~~~l--v~~~D~i~~~~l~~~l~~h~~~ 129 (365)
.....+++| ++++|++...+|.+.+..|...
T Consensus 35 ~~~~~EP~L~~~l~~~IL~~~~l~~aLa~~La~ 67 (289)
T 1t3d_A 35 TLADCEPMLASFYHATLLKHENLGSALSYMLAN 67 (289)
T ss_dssp HHHHHCGGGHHHHHHHTTTCSSHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHhcccccCCCCHHHHHHHHHhc
Confidence 334468888 9999999999999999998764
No 117
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=34.53 E-value=12 Score=33.68 Aligned_cols=23 Identities=9% Similarity=0.128 Sum_probs=12.4
Q ss_pred CCCCCccCCCceeCCcccccCCC
Q 017849 342 SAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 342 ~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
.+.++.|.++++||+++.||+++
T Consensus 232 IGaga~Ilggv~IG~~a~IGags 254 (313)
T 3q1x_A 232 IGTGAKVLGNIIVGSHVRIGANC 254 (313)
T ss_dssp ECTTCEEESSCEECSSEEECTTC
T ss_pred ECCCCEECCCcEECCCCEECCCC
Confidence 33444455555566666666654
No 118
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=34.36 E-value=13 Score=32.80 Aligned_cols=23 Identities=13% Similarity=0.164 Sum_probs=12.5
Q ss_pred CCCCCccCCCceeCCcccccCCC
Q 017849 342 SAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 342 ~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
.+.++.|.++++||+++.||+++
T Consensus 198 IGaga~Il~gv~IG~~a~IGags 220 (267)
T 1ssq_A 198 IGAGAKILGNIEVGKYAKIGANS 220 (267)
T ss_dssp ECTTCEEESSCEECTTCEECTTC
T ss_pred EcCCCEEeCCcEECCCCEECCCC
Confidence 33444455555566666666654
No 119
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=34.16 E-value=14 Score=30.56 Aligned_cols=24 Identities=8% Similarity=0.124 Sum_probs=14.3
Q ss_pred CCCCCCccCCCceeCCcccccCCC
Q 017849 341 FSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 341 ~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
..++++.|+.+|.|.++++||+++
T Consensus 136 ~IG~~v~IG~~~~I~~gv~Ig~~~ 159 (205)
T 3vbi_A 136 ILKKHVIIGAHSIIFPNVVIGEGV 159 (205)
T ss_dssp EECTTCEECTTCEECSSCEECTTC
T ss_pred EECCCCEECCCCEEcCCCEECCCC
Confidence 344556666666666666666655
No 120
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=33.34 E-value=16 Score=30.53 Aligned_cols=23 Identities=17% Similarity=0.108 Sum_probs=13.9
Q ss_pred CCCCCccCCCceeCCcccccCCC
Q 017849 342 SAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 342 ~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
.+.++.|.++++||+++.||+++
T Consensus 146 IG~~~~I~~gv~Ig~~~vIgags 168 (215)
T 2wlg_A 146 LGRNVTILKGVCIPNNVVVGSHT 168 (215)
T ss_dssp ECTTCEECTTCEECSSCEECTTC
T ss_pred ECCCCEECCCCEECCCCEECCCC
Confidence 34455566666666666666654
No 121
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=32.80 E-value=17 Score=30.60 Aligned_cols=22 Identities=18% Similarity=0.460 Sum_probs=11.6
Q ss_pred CCCCccCCCceeCCcccccCCC
Q 017849 343 AQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 343 ~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
+.++.|.++++||+++.||+++
T Consensus 123 G~~a~I~~gv~Ig~~~~Igags 144 (209)
T 1mr7_A 123 GKDVVIMPGVKIGDGAIVAANS 144 (209)
T ss_dssp CTTCEECTTCEECTTCEECTTC
T ss_pred cCCCEEcCCCEECCCCEEcCCC
Confidence 3444555555555555555554
No 122
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=32.73 E-value=17 Score=30.87 Aligned_cols=22 Identities=14% Similarity=0.403 Sum_probs=11.8
Q ss_pred CCCCccCCCceeCCcccccCCC
Q 017849 343 AQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 343 ~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
+.++.|.++++||+++.||+++
T Consensus 128 G~~a~I~~gv~IG~~~~Igags 149 (219)
T 4e8l_A 128 GRDVTIMPGVKIGDGAIIAAEA 149 (219)
T ss_dssp CTTCEECTTCEECTTCEECTTC
T ss_pred CCCCEEcCCCEECCCCEECCCC
Confidence 3444555555555555555554
No 123
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=32.49 E-value=14 Score=32.61 Aligned_cols=18 Identities=17% Similarity=0.252 Sum_probs=6.8
Q ss_pred CCCccCCCceeCCccccc
Q 017849 344 QNNIIHPSAELGSKTTVS 361 (365)
Q Consensus 344 ~~~~i~~~~~i~~~~~ig 361 (365)
++++|+++|+|+.++.||
T Consensus 57 ~~~~I~~~~~I~~~~~IG 74 (283)
T 4eqy_A 57 ARTTIGSHSVIEGHTTIG 74 (283)
T ss_dssp TTCEECTTCEECSEEEEC
T ss_pred CCCEECCCCEECCCcEEC
Confidence 333344333333333333
No 124
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=32.09 E-value=18 Score=29.71 Aligned_cols=22 Identities=9% Similarity=0.161 Sum_probs=10.5
Q ss_pred CCCCccCCCceeCCcccccCCC
Q 017849 343 AQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 343 ~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
+.+++|.+++.||+++.||+++
T Consensus 122 g~~~~I~~~~~Ig~~~~Ig~gs 143 (191)
T 3ixc_A 122 GMGSIVMDRAVMEEGSMLAAGS 143 (191)
T ss_dssp CTTCEECTTCEECTTCEECTTC
T ss_pred CCCCEEeCCeEECCCCEECCCC
Confidence 3344444445555555555443
No 125
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=32.03 E-value=18 Score=31.05 Aligned_cols=14 Identities=0% Similarity=0.140 Sum_probs=5.6
Q ss_pred ccCCCceeCCcccc
Q 017849 347 IIHPSAELGSKTTV 360 (365)
Q Consensus 347 ~i~~~~~i~~~~~i 360 (365)
+|+++|.|+++++|
T Consensus 101 ~IG~~~~Ig~~~~I 114 (247)
T 1qre_A 101 FVGDRSNVQDGVVL 114 (247)
T ss_dssp EECTTCEECTTCEE
T ss_pred EECCCCEECCCeEE
Confidence 33444444443333
No 126
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=31.93 E-value=17 Score=33.01 Aligned_cols=6 Identities=0% Similarity=0.108 Sum_probs=2.4
Q ss_pred eeeeCH
Q 017849 212 MYAFNR 217 (365)
Q Consensus 212 iyi~s~ 217 (365)
..+++.
T Consensus 58 ~~i~~~ 63 (341)
T 3eh0_A 58 AVVMTQ 63 (341)
T ss_dssp EEEECT
T ss_pred EEEECH
Confidence 334443
No 127
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=31.91 E-value=15 Score=32.74 Aligned_cols=24 Identities=13% Similarity=0.183 Sum_probs=13.1
Q ss_pred CCCCCCccCCCceeCCcccccCCC
Q 017849 341 FSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 341 ~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
..+.++.|.++++||+++.||+++
T Consensus 217 ~IGaga~Ilggv~IG~~a~IGags 240 (289)
T 1t3d_A 217 MIGAGAKILGNIEVGRGAKIGAGS 240 (289)
T ss_dssp EECTTCEEESSCEECTTCEECTTC
T ss_pred EECCCCEEecCcEECCCCEECCCC
Confidence 334444555555566666666654
No 128
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=31.49 E-value=18 Score=30.51 Aligned_cols=25 Identities=12% Similarity=0.042 Sum_probs=16.7
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
...++++.|+.+|.|.++++||.++
T Consensus 111 v~IG~~v~IG~~a~I~~gv~Ig~~~ 135 (212)
T 1xat_A 111 TLIGHEVWIGTEAMFMPGVRVGHGA 135 (212)
T ss_dssp EEECTTCEECTTCEECTTCEECTTC
T ss_pred eEECCCCEECCCCEEeCCCEECCCC
Confidence 3445666777777777777777765
No 129
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=31.40 E-value=18 Score=31.81 Aligned_cols=7 Identities=43% Similarity=1.013 Sum_probs=2.5
Q ss_pred eCCcccc
Q 017849 354 LGSKTTV 360 (365)
Q Consensus 354 i~~~~~i 360 (365)
||++|.|
T Consensus 55 IG~~~~I 61 (283)
T 4eqy_A 55 IGARTTI 61 (283)
T ss_dssp ECTTCEE
T ss_pred ECCCCEE
Confidence 3333333
No 130
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=30.74 E-value=17 Score=31.38 Aligned_cols=25 Identities=8% Similarity=-0.019 Sum_probs=15.7
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
...++++.|+++|.|.++++||+++
T Consensus 164 v~Igd~v~IG~~a~I~~gv~IG~~~ 188 (252)
T 3jqy_B 164 IIISSYVWVGRNVSIMKGVSVGSGS 188 (252)
T ss_dssp EEECSSCEECSSEEECTTCEECTTC
T ss_pred eEEecCcEECCCCEECCCCEECCCC
Confidence 3445566666666666666666665
No 131
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=30.64 E-value=18 Score=32.65 Aligned_cols=19 Identities=26% Similarity=0.263 Sum_probs=9.3
Q ss_pred CCccCCCceeCCcccccCC
Q 017849 345 NNIIHPSAELGSKTTVSSS 363 (365)
Q Consensus 345 ~~~i~~~~~i~~~~~ig~~ 363 (365)
..+|.++|+||++++|||+
T Consensus 167 ~AvI~~gA~IGeGv~Igp~ 185 (332)
T 3fsy_A 167 ADRVRLGAHLAPGTTVMHE 185 (332)
T ss_dssp GGGBBTTEEECTTCEECTT
T ss_pred cCEECCCCEECCCCEEccc
Confidence 3344445555555555543
No 132
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=30.37 E-value=19 Score=29.42 Aligned_cols=12 Identities=8% Similarity=-0.000 Sum_probs=4.6
Q ss_pred CceeCCcccccC
Q 017849 351 SAELGSKTTVSS 362 (365)
Q Consensus 351 ~~~i~~~~~ig~ 362 (365)
++.||+++.||+
T Consensus 69 ~~~Ig~~~~ig~ 80 (192)
T 3mqg_A 69 NVFLEDDVFCGP 80 (192)
T ss_dssp TEEECTTCEECT
T ss_pred CCEECCCCEECC
Confidence 333333333333
No 133
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=30.35 E-value=17 Score=30.28 Aligned_cols=9 Identities=33% Similarity=0.693 Sum_probs=3.4
Q ss_pred CCcccccCC
Q 017849 355 GSKTTVSSS 363 (365)
Q Consensus 355 ~~~~~ig~~ 363 (365)
|++|.||++
T Consensus 83 G~~~~Ig~~ 91 (213)
T 3kwd_A 83 GSRTNIQDG 91 (213)
T ss_dssp CTTCEECTT
T ss_pred CCCCEECCC
Confidence 333333333
No 134
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=30.05 E-value=18 Score=30.41 Aligned_cols=25 Identities=20% Similarity=0.322 Sum_probs=14.5
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
.+.+.+++|.++++||+++.||+++
T Consensus 172 ~~Ig~~~~i~~~~~Ig~~~~igags 196 (220)
T 4ea9_A 172 AFLGVGARVIPGVTIGADTIVGAGG 196 (220)
T ss_dssp CEECTTCEECTTCEECTTCEECTTC
T ss_pred CEECCCCEEcCCcEECCCCEECCCC
Confidence 3444555566666666666666654
No 135
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=29.79 E-value=18 Score=29.37 Aligned_cols=21 Identities=14% Similarity=0.196 Sum_probs=9.6
Q ss_pred CCCccCCCceeCCcccccCCC
Q 017849 344 QNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 344 ~~~~i~~~~~i~~~~~ig~~~ 364 (365)
.+++|.+++.||+++.||+++
T Consensus 115 ~~~~i~~~v~Ig~~~~Ig~~s 135 (189)
T 3r1w_A 115 MKSMIMDGAIVEDEVIVAAGA 135 (189)
T ss_dssp TTCEECTTCEECSSCEECTTC
T ss_pred CCCEEcCCCEECCCCEEccCC
Confidence 344444444444444444443
No 136
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=29.70 E-value=6.1 Score=34.16 Aligned_cols=12 Identities=17% Similarity=0.445 Sum_probs=6.4
Q ss_pred eeCCcccccCCC
Q 017849 353 ELGSKTTVSSSL 364 (365)
Q Consensus 353 ~i~~~~~ig~~~ 364 (365)
+||+++.||+++
T Consensus 101 ~IG~~~~Ig~~~ 112 (247)
T 1qre_A 101 FVGDRSNVQDGV 112 (247)
T ss_dssp EECTTCEECTTC
T ss_pred EECCCCEECCCe
Confidence 455555555554
No 137
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=29.46 E-value=18 Score=33.45 Aligned_cols=12 Identities=8% Similarity=-0.092 Sum_probs=7.5
Q ss_pred cceeeeeCHHHH
Q 017849 209 DAHMYAFNRSVL 220 (365)
Q Consensus 209 ~~giyi~s~~vl 220 (365)
.++..+++.+.+
T Consensus 77 ~a~~~i~~~~~~ 88 (372)
T 3pmo_A 77 RAGAVLLTAADA 88 (372)
T ss_dssp CCSEEEECHHHH
T ss_pred CCcEEEEcHHHH
Confidence 456777777644
No 138
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=29.11 E-value=22 Score=28.56 Aligned_cols=22 Identities=23% Similarity=0.341 Sum_probs=11.1
Q ss_pred CCCCccCCCceeCCcccccCCC
Q 017849 343 AQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 343 ~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
+.++.|.+++.||+++.||+++
T Consensus 100 g~~~~i~~~~~Ig~~~~Ig~~s 121 (173)
T 1xhd_A 100 GMGSIILDGAEIGEGAFIGAGS 121 (173)
T ss_dssp CTTCEECTTCEECTTCEECTTC
T ss_pred cCCCEEcCCCEECCCCEECCCC
Confidence 3444455555555555555543
No 139
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=29.00 E-value=19 Score=28.92 Aligned_cols=22 Identities=14% Similarity=0.344 Sum_probs=10.5
Q ss_pred CCCCccCCCceeCCcccccCCC
Q 017849 343 AQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 343 ~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
+.++.|.+++.||+++.||+++
T Consensus 98 g~~~~i~~~~~Ig~~~~Ig~~s 119 (173)
T 1v3w_A 98 GISSVILDGAKIGDHVIIGAGA 119 (173)
T ss_dssp CTTCEECTTCEECSSEEECTTC
T ss_pred CCCCEEeCCCEECCCCEECCCC
Confidence 3344444455555555555443
No 140
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=28.90 E-value=22 Score=32.60 Aligned_cols=13 Identities=15% Similarity=0.245 Sum_probs=8.9
Q ss_pred cceeeeeCHHHHH
Q 017849 209 DAHMYAFNRSVLQ 221 (365)
Q Consensus 209 ~~giyi~s~~vl~ 221 (365)
.++..+++++...
T Consensus 59 ~a~~~i~~~~~~~ 71 (357)
T 4e79_A 59 RAGAYIVTAALKE 71 (357)
T ss_dssp CCSEEEECHHHHH
T ss_pred CCEEEEEcHHHhh
Confidence 4577888887543
No 141
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=28.75 E-value=19 Score=29.26 Aligned_cols=23 Identities=9% Similarity=0.143 Sum_probs=11.3
Q ss_pred CCCCCccCCCceeCCcccccCCC
Q 017849 342 SAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 342 ~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
.+.+++|.+++.||+++.||+++
T Consensus 109 Ig~~~~I~~~~~Ig~~~~Ig~~s 131 (187)
T 3r3r_A 109 VGMGSIVLDGAIIEDDVMIGAGS 131 (187)
T ss_dssp ECTTCEECTTCEECSSEEECTTC
T ss_pred ECCCCEECCCCEECCCCEECCCC
Confidence 33444444555555555555543
No 142
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=28.64 E-value=22 Score=31.33 Aligned_cols=10 Identities=20% Similarity=0.275 Sum_probs=4.5
Q ss_pred HHHHHHHHHc
Q 017849 92 GALRAIAHHL 101 (365)
Q Consensus 92 ~al~~~~~~i 101 (365)
+++...++.+
T Consensus 31 ~~~~~~~~~l 40 (276)
T 3gos_A 31 EAITHVIDLL 40 (276)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3444444444
No 143
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=28.39 E-value=22 Score=32.08 Aligned_cols=11 Identities=18% Similarity=0.184 Sum_probs=5.7
Q ss_pred HHHHHHHHHcC
Q 017849 92 GALRAIAHHLT 102 (365)
Q Consensus 92 ~al~~~~~~i~ 102 (365)
++|..+++.+.
T Consensus 71 ~~~~~~~~~l~ 81 (316)
T 3tk8_A 71 EAVAHAIEQLD 81 (316)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 45555555544
No 144
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=28.30 E-value=22 Score=31.84 Aligned_cols=19 Identities=0% Similarity=0.001 Sum_probs=7.9
Q ss_pred CCccCCCceeCCcccccCC
Q 017849 345 NNIIHPSAELGSKTTVSSS 363 (365)
Q Consensus 345 ~~~i~~~~~i~~~~~ig~~ 363 (365)
++.|.++|.||+++.||++
T Consensus 214 ~a~I~~gv~IG~~avIgag 232 (304)
T 3eg4_A 214 RSEVVEGCIVREGSVLGMG 232 (304)
T ss_dssp TCEECTTCEECTTCEECTT
T ss_pred CCEEcCCcEECCCcEECCC
Confidence 3333344444444444443
No 145
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=28.27 E-value=23 Score=29.71 Aligned_cols=27 Identities=7% Similarity=0.070 Sum_probs=18.0
Q ss_pred CCCCCCCCCccCCCceeCCcccccCCC
Q 017849 338 GYNFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 338 ~~~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
+....+.++.|+.+|.|.++++||+++
T Consensus 112 ~~v~Ig~~v~IG~~a~I~~gv~Ig~~~ 138 (209)
T 1mr7_A 112 GDTIIGNDVWIGKDVVIMPGVKIGDGA 138 (209)
T ss_dssp CCEEECSSCEECTTCEECTTCEECTTC
T ss_pred CCcEECCCCEEcCCCEEcCCCEECCCC
Confidence 334445667777777777777777765
No 146
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=27.45 E-value=24 Score=30.72 Aligned_cols=9 Identities=11% Similarity=0.169 Sum_probs=3.4
Q ss_pred CCCccCCCc
Q 017849 344 QNNIIHPSA 352 (365)
Q Consensus 344 ~~~~i~~~~ 352 (365)
+++.|+++|
T Consensus 57 ~~~~I~~~a 65 (266)
T 3r0s_A 57 DHSRVFSYA 65 (266)
T ss_dssp TTCEECTTC
T ss_pred CCcEEccCc
Confidence 333333333
No 147
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=26.42 E-value=26 Score=29.67 Aligned_cols=26 Identities=4% Similarity=-0.097 Sum_probs=16.9
Q ss_pred CCCCCCCCccCCCceeCCcccccCCC
Q 017849 339 YNFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 339 ~~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
....+.++.|+.+|.|.++++||.++
T Consensus 118 ~v~Igd~v~IG~~a~I~~gv~IG~~~ 143 (219)
T 4e8l_A 118 DIEIGNDVWIGRDVTIMPGVKIGDGA 143 (219)
T ss_dssp CEEECSSCEECTTCEECTTCEECTTC
T ss_pred CcEECCCeEECCCCEEcCCCEECCCC
Confidence 33445566777777777777777765
No 148
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=25.28 E-value=27 Score=28.25 Aligned_cols=9 Identities=0% Similarity=0.143 Sum_probs=3.2
Q ss_pred cCCCceeCC
Q 017849 348 IHPSAELGS 356 (365)
Q Consensus 348 i~~~~~i~~ 356 (365)
|+++|.||.
T Consensus 125 Ig~~~~Ig~ 133 (189)
T 3r1w_A 125 VEDEVIVAA 133 (189)
T ss_dssp ECSSCEECT
T ss_pred ECCCCEEcc
Confidence 333333333
No 149
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=25.11 E-value=29 Score=28.30 Aligned_cols=13 Identities=0% Similarity=-0.026 Sum_probs=4.6
Q ss_pred CCCceeCCccccc
Q 017849 349 HPSAELGSKTTVS 361 (365)
Q Consensus 349 ~~~~~i~~~~~ig 361 (365)
+.+|.|.+++.||
T Consensus 122 g~~~~I~~~~~Ig 134 (191)
T 3ixc_A 122 GMGSIVMDRAVME 134 (191)
T ss_dssp CTTCEECTTCEEC
T ss_pred CCCCEEeCCeEEC
Confidence 3333333333333
No 150
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=24.91 E-value=27 Score=30.23 Aligned_cols=25 Identities=12% Similarity=0.276 Sum_probs=16.2
Q ss_pred CCCCCCCccCCCceeCCcccccCCC
Q 017849 340 NFSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 340 ~~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
.+.+.++.|.++++||+++.||+++
T Consensus 177 ~~IG~~~~I~~g~~IG~~~~Igags 201 (273)
T 3fs8_A 177 AVIAARSVVLPGIHINEDALVGAGA 201 (273)
T ss_dssp CEECTTCEECTTCEECTTCEECTTC
T ss_pred eEEcCCCEEcCCCEECCCCEECCCC
Confidence 3445566667777777777777665
No 151
>3toe_A MTH10B, DNA/RNA-binding protein ALBA; SAC10B family, alpha/beta mixed, homodimer, unknown function; 2.20A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=24.86 E-value=1.2e+02 Score=21.73 Aligned_cols=32 Identities=25% Similarity=0.566 Sum_probs=25.7
Q ss_pred eceeCCcchHHHHHHHHHh--CCCCeEEEEecCc
Q 017849 28 LLPVANRPVLSYVLEQLEL--SNIKDLIVVVEGA 59 (365)
Q Consensus 28 llpv~gkplI~~~L~~l~~--~gi~~v~vv~~~~ 59 (365)
.+-+|+||+..|++..+.. .|.++|++-...+
T Consensus 6 vv~vg~Kpv~~YV~~~i~~~n~g~~eV~ikA~G~ 39 (91)
T 3toe_A 6 VVYIGNKPVMNYVLAVVTQMNGGTSEVILKARGI 39 (91)
T ss_dssp CEECCSSCHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred EEEECCCcHHHHHHHHHHHHhCCCCEEEEEEehh
Confidence 4568899999999988743 5799999988755
No 152
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=24.18 E-value=3.1e+02 Score=22.85 Aligned_cols=41 Identities=10% Similarity=-0.042 Sum_probs=29.1
Q ss_pred CChHHHHHHHHHHcCCCcEEEEeCCcccCCC-hHHHHHHHHh
Q 017849 88 VGTAGALRAIAHHLTAKDVLVVSGDLVSDVP-PGAVTAAHRR 128 (365)
Q Consensus 88 ~gt~~al~~~~~~i~~~~~lv~~~D~i~~~~-l~~~l~~h~~ 128 (365)
.|.+.+.-.+++....+++++++.|.+.+.+ +..+++...+
T Consensus 60 ~g~a~a~N~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~ 101 (249)
T 2nxv_A 60 FHGFSWHKQMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEA 101 (249)
T ss_dssp CCTTTHHHHHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHh
Confidence 4556666666666666889999999765544 7777776654
No 153
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=23.77 E-value=49 Score=30.67 Aligned_cols=22 Identities=0% Similarity=-0.201 Sum_probs=14.5
Q ss_pred CceEEEeCC--HHHHHHHhHHHhh
Q 017849 310 SKYCVRLNS--IQAFMDINRDVIG 331 (365)
Q Consensus 310 ~~y~~ri~~--~~~Y~~~n~~~l~ 331 (365)
..||..... +..|....+++..
T Consensus 169 ~~~Wt~~G~~~~~~f~~~~~~l~~ 192 (387)
T 2rij_A 169 NVAWSDDKPIELEYLRANEMRLKM 192 (387)
T ss_dssp CEEEETTEEECHHHHHHHHHHHHH
T ss_pred eeeeccCcccCHHHHHHHHHHHHh
Confidence 567765555 5677777777763
No 154
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=23.37 E-value=27 Score=31.06 Aligned_cols=8 Identities=0% Similarity=0.247 Sum_probs=3.2
Q ss_pred CCCccCCC
Q 017849 344 QNNIIHPS 351 (365)
Q Consensus 344 ~~~~i~~~ 351 (365)
+++.|+++
T Consensus 60 ~~~~I~~~ 67 (305)
T 3t57_A 60 ESCVLMTG 67 (305)
T ss_dssp TTCEECTT
T ss_pred CCcEEccC
Confidence 34444443
No 155
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=22.63 E-value=25 Score=32.32 Aligned_cols=6 Identities=17% Similarity=0.180 Sum_probs=2.4
Q ss_pred HHHHHH
Q 017849 92 GALRAI 97 (365)
Q Consensus 92 ~al~~~ 97 (365)
..+...
T Consensus 106 ~~~~~l 111 (401)
T 2ggo_A 106 KEICNI 111 (401)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 344433
No 156
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=22.58 E-value=27 Score=31.51 Aligned_cols=14 Identities=29% Similarity=0.477 Sum_probs=7.5
Q ss_pred CceeCCcccccCCC
Q 017849 351 SAELGSKTTVSSSL 364 (365)
Q Consensus 351 ~~~i~~~~~ig~~~ 364 (365)
+++||+++.||+++
T Consensus 249 gVtIGd~~iIGAGS 262 (332)
T 3fsy_A 249 GISLGDDCVVEAGL 262 (332)
T ss_dssp CSCBCSSCEECTTC
T ss_pred eeEECCCCEECCCC
Confidence 34555555555554
No 157
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=22.28 E-value=36 Score=28.31 Aligned_cols=24 Identities=0% Similarity=0.044 Sum_probs=15.1
Q ss_pred CCCCCCccCCCceeCCcccccCCC
Q 017849 341 FSAQNNIIHPSAELGSKTTVSSSL 364 (365)
Q Consensus 341 ~~~~~~~i~~~~~i~~~~~ig~~~ 364 (365)
..+.++.|+.+|.|.++++||+++
T Consensus 139 ~Igd~v~IG~~~~I~~gv~Ig~~~ 162 (215)
T 2wlg_A 139 IIGNHVWLGRNVTILKGVCIPNNV 162 (215)
T ss_dssp EECTTCEECTTCEECTTCEECSSC
T ss_pred EECCCcEECCCCEECCCCEECCCC
Confidence 344556666666666666676665
No 158
>2bky_X DNA/RNA-binding protein ALBA 2; archaeal DNA binding protein, DNA condensation, DNA-binding, DNA binding protein; 1.70A {Sulfolobus solfataricus} SCOP: d.68.6.1 PDB: 2a2y_A 1udv_A
Probab=21.80 E-value=1.1e+02 Score=21.77 Aligned_cols=37 Identities=19% Similarity=0.207 Sum_probs=28.9
Q ss_pred CCCceeceeCCcchHHHHHHHH--HhCCCCeEEEEecCc
Q 017849 23 EVPKALLPVANRPVLSYVLEQL--ELSNIKDLIVVVEGA 59 (365)
Q Consensus 23 ~~pK~llpv~gkplI~~~L~~l--~~~gi~~v~vv~~~~ 59 (365)
+.|...+-++.+|+..|++..+ .+.|.++|++-....
T Consensus 3 ~~~~~iv~vg~kpv~nYV~~~~~~ln~g~~eV~ikA~G~ 41 (89)
T 2bky_X 3 EKLNEIVVRKTKNVEDHVLDVIVLFNQGIDEVILKGTGR 41 (89)
T ss_dssp -CCEEEECCTTSCHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred CCCCCEEEECCCCHHHHHHHHHHHHhCCCCEEEEEEech
Confidence 4667778889999999988875 446899999987655
No 159
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=20.75 E-value=29 Score=32.57 Aligned_cols=25 Identities=4% Similarity=-0.085 Sum_probs=13.0
Q ss_pred EEEcCCCCChHHHHHHHHHHcCCCc
Q 017849 81 VATVPEDVGTAGALRAIAHHLTAKD 105 (365)
Q Consensus 81 i~~~~~~~gt~~al~~~~~~i~~~~ 105 (365)
+...+.+.=+...+....+...+.+
T Consensus 104 v~~~D~P~i~~~~i~~l~~~~~~~~ 128 (459)
T 4fce_A 104 MLYGDVPLISVDTLQRLLAAKPEGG 128 (459)
T ss_dssp EEETTCTTCCHHHHHHHHHHCCTTS
T ss_pred EEeCCcccCCHHHHHHHHHHHhhCC
Confidence 3333444445566666666554333
Done!