Query 017851
Match_columns 365
No_of_seqs 143 out of 1234
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 05:57:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017851.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017851hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dwl_A Actin-related protein 3 100.0 1.1E-80 3.6E-85 595.7 21.6 357 6-365 4-422 (427)
2 3qb0_A Actin-related protein 4 100.0 6.9E-79 2.4E-83 588.2 25.1 355 1-364 17-497 (498)
3 2fxu_A Alpha-actin-1, actin, a 100.0 4E-74 1.4E-78 545.7 29.2 363 3-365 1-375 (375)
4 1k8k_B ARP2, actin-like protei 100.0 7.7E-74 2.6E-78 546.5 16.2 360 3-362 2-388 (394)
5 4fo0_A Actin-related protein 8 100.0 3.8E-71 1.3E-75 555.5 19.7 358 7-365 15-590 (593)
6 1k8k_A ARP3, actin-like protei 100.0 4.4E-68 1.5E-72 511.6 26.3 359 5-364 3-412 (418)
7 4am6_A Actin-like protein ARP8 100.0 5.3E-58 1.8E-62 445.3 22.2 350 5-365 38-652 (655)
8 1jce_A ROD shape-determining p 100.0 4.8E-30 1.7E-34 240.3 16.6 294 8-343 4-330 (344)
9 2v7y_A Chaperone protein DNAK; 99.8 1.8E-19 6.2E-24 176.8 7.0 283 8-339 3-350 (509)
10 3h1q_A Ethanolamine utilizatio 99.8 3.2E-18 1.1E-22 154.5 13.5 232 7-337 28-272 (272)
11 1dkg_D Molecular chaperone DNA 99.7 3.5E-17 1.2E-21 155.1 10.7 228 81-339 113-381 (383)
12 3qfu_A 78 kDa glucose-regulate 99.7 1.9E-16 6.5E-21 150.5 13.0 287 7-339 18-392 (394)
13 3i33_A Heat shock-related 70 k 99.6 4.2E-15 1.4E-19 141.7 10.0 288 6-339 22-400 (404)
14 2kho_A Heat shock protein 70; 99.4 9E-13 3.1E-17 131.6 11.2 203 102-339 135-381 (605)
15 1yuw_A Heat shock cognate 71 k 99.4 2.9E-12 1E-16 126.7 14.2 203 103-339 140-379 (554)
16 3d2f_A Heat shock protein homo 99.2 2.5E-11 8.7E-16 122.3 11.5 201 103-339 139-382 (675)
17 4gni_A Putative heat shock pro 99.2 1.3E-11 4.5E-16 117.7 6.9 224 82-340 129-401 (409)
18 2ych_A Competence protein PILM 99.1 4.8E-10 1.6E-14 105.6 13.9 155 123-308 157-331 (377)
19 2fsj_A Hypothetical protein TA 99.1 7.6E-11 2.6E-15 109.7 7.7 167 8-186 22-240 (346)
20 4b9q_A Chaperone protein DNAK; 99.1 2.1E-10 7.1E-15 114.5 9.4 224 82-339 114-381 (605)
21 4a2a_A Cell division protein F 98.9 1.9E-08 6.4E-13 95.8 13.7 187 115-339 167-393 (419)
22 4apw_A ALP12; actin-like prote 98.6 9.3E-09 3.2E-13 94.9 2.3 271 6-339 6-324 (329)
23 2zgy_A Plasmid segregation pro 98.6 4.2E-08 1.4E-12 90.2 5.2 166 127-338 136-320 (320)
24 3js6_A Uncharacterized PARM pr 98.4 3.9E-07 1.3E-11 84.8 6.5 172 9-186 6-232 (355)
25 2d0o_A DIOL dehydratase-reacti 96.5 0.0012 4.1E-08 63.2 3.0 62 138-210 390-468 (610)
26 1nbw_A Glycerol dehydratase re 96.4 0.0028 9.5E-08 60.9 5.1 62 138-210 392-470 (607)
27 4ehu_A Activator of 2-hydroxyi 95.8 0.0032 1.1E-07 56.0 2.0 51 280-338 203-253 (276)
28 2ews_A Pantothenate kinase; PA 90.1 0.13 4.5E-06 45.7 2.4 49 284-337 237-286 (287)
29 1hux_A Activator of (R)-2-hydr 84.2 0.22 7.5E-06 43.9 0.3 48 284-339 209-256 (270)
30 2i7n_A Pantothenate kinase 1; 76.7 1.2 4E-05 40.8 2.4 56 280-337 302-358 (360)
31 4htl_A Beta-glucoside kinase; 67.0 3.5 0.00012 36.5 3.2 66 264-338 225-290 (297)
32 2aa4_A Mannac kinase, putative 63.5 2.6 8.8E-05 37.0 1.6 51 286-337 236-286 (289)
33 4db3_A Glcnac kinase, N-acetyl 62.4 4.8 0.00017 36.1 3.2 67 264-337 257-324 (327)
34 2gup_A ROK family protein; sug 60.7 2.1 7.1E-05 37.7 0.4 67 264-337 215-285 (292)
35 2hoe_A N-acetylglucosamine kin 57.4 6.3 0.00022 36.2 3.2 67 264-337 302-369 (380)
36 3vov_A Glucokinase, hexokinase 56.2 4.6 0.00016 35.8 2.0 67 264-337 225-293 (302)
37 3r8e_A Hypothetical sugar kina 54.2 4.5 0.00016 36.1 1.6 67 264-337 248-317 (321)
38 2qm1_A Glucokinase; alpha-beta 53.7 4.3 0.00015 36.2 1.3 52 286-337 265-319 (326)
39 3epq_A Putative fructokinase; 51.8 8 0.00027 34.3 2.8 67 264-337 212-287 (302)
40 3vgl_A Glucokinase; ROK family 49.3 9.5 0.00033 34.0 2.9 68 264-338 240-311 (321)
41 3htv_A D-allose kinase, alloki 45.7 14 0.00046 32.9 3.3 58 287-344 243-304 (310)
42 3qbx_A Anhydro-N-acetylmuramic 45.3 7.7 0.00026 35.5 1.6 23 285-307 285-307 (371)
43 2ch5_A NAGK protein; transfera 41.1 13 0.00045 33.3 2.5 71 264-337 245-322 (347)
44 2ap1_A Putative regulator prot 39.2 7.2 0.00025 34.8 0.4 52 286-337 272-324 (327)
45 3cqy_A Anhydro-N-acetylmuramic 38.2 12 0.0004 34.3 1.6 23 285-307 291-313 (370)
46 1saz_A Probable butyrate kinas 37.5 17 0.00059 33.3 2.7 51 285-339 297-348 (381)
47 2yhx_A Hexokinase B; transfera 36.5 18 0.0006 34.2 2.6 51 286-339 386-442 (457)
48 1bdg_A Hexokinase; phosphotran 35.6 25 0.00085 33.1 3.5 50 287-339 396-446 (451)
49 2e2o_A Hexokinase; acetate and 33.5 12 0.00042 32.7 1.0 45 286-338 242-286 (299)
50 3eno_A Putative O-sialoglycopr 32.5 24 0.00081 31.7 2.7 27 284-310 250-276 (334)
51 2q2r_A Glucokinase 1, putative 31.9 13 0.00044 33.9 0.8 18 8-25 30-47 (373)
52 2ivn_A O-sialoglycoprotein end 31.7 26 0.00088 31.4 2.8 35 284-323 245-279 (330)
53 2yhw_A Bifunctional UDP-N-acet 28.0 30 0.001 30.9 2.6 64 264-337 272-336 (343)
54 3d7j_A Uncharacterized protein 27.6 23 0.00078 27.9 1.5 50 74-129 65-115 (152)
55 1cza_N Hexokinase type I; stru 26.4 21 0.00073 36.9 1.4 51 285-339 408-459 (917)
56 1z6r_A MLC protein; transcript 24.0 33 0.0011 31.5 2.1 52 286-337 337-391 (406)
57 2e1z_A Propionate kinase; TDCD 23.5 34 0.0012 31.7 2.0 25 1-25 12-36 (415)
58 2itm_A Xylulose kinase, xylulo 21.8 43 0.0015 31.6 2.5 48 284-339 387-434 (484)
59 1z05_A Transcriptional regulat 21.5 33 0.0011 31.9 1.5 52 286-338 360-414 (429)
No 1
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-80 Score=595.73 Aligned_cols=357 Identities=36% Similarity=0.675 Sum_probs=309.2
Q ss_pred CCCcEEEeCCCCcEEEeeeCCCCCCCCCCcceEeeCCCC----------------------ccccCCCccccccchhhhc
Q 017851 6 DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG----------------------VMVGMGQKDAYVGDEAQSK 63 (365)
Q Consensus 6 ~~~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~----------------------~~~~~~~~~~~~g~~~~~~ 63 (365)
+.++||||+||+++|+||||++.|+.+|||++++|++.. ...+...+++++|+++...
T Consensus 4 ~~~~iViDnGs~~~KaG~ag~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~ea~~~ 83 (427)
T 3dwl_A 4 FNVPIIMDNGTGYSKLGYAGNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALKK 83 (427)
T ss_dssp CCSCEEECCCSSBC-CEETTSSSCSCCCBCCEECC------------------------------CCSSCCEETHHHHHT
T ss_pred CCCeEEEECCCCeEEEEECCCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEchHHhhC
Confidence 678999999999999999999999999999999987541 1123445688999999888
Q ss_pred cC-cceeeccccCCccCCHHHHHHHHHHhcccccccCCCCCceEEecCCCCCHHhHHHHHHHhhccCCCCceecccchhh
Q 017851 64 RG-ILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVL 142 (365)
Q Consensus 64 ~~-~~~~~~p~~~g~i~~~~~~~~~l~~~~~~~L~~~~~~~~vvl~e~~~~~~~~r~~l~~~lfe~l~~~~v~~~~~~~~ 142 (365)
+. .+++++|+++|+|.|||.++++|+|+|++.|+++|.++||+++||+++++..|++++|++||.|++++++++.++++
T Consensus 84 ~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vl 163 (427)
T 3dwl_A 84 ASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVL 163 (427)
T ss_dssp HHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHH
T ss_pred cccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHH
Confidence 75 68899999999999999999999999989999999999999999999999999999999999999999999999999
Q ss_pred hhhcC--------------------CceEEEEeeCCeeCCCceEEecCcHHHHHHHHHHHHHhcCCCccchhHHHHHHHH
Q 017851 143 SLYAN--------------------GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDM 202 (365)
Q Consensus 143 a~~~~--------------------~~t~v~pV~~g~~~~~~~~~~~~gG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~i 202 (365)
|+|++ |.|+|+||++|+++.++++++++||++++++|.++|++++.. ..+.+++++|
T Consensus 164 a~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~---~~~~~~~~~I 240 (427)
T 3dwl_A 164 ALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP---DSSLKTAERI 240 (427)
T ss_dssp HHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC-----------CHHHHHH
T ss_pred HHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCC---chhHHHHHHH
Confidence 99973 568999999999999999999999999999999999988776 3356899999
Q ss_pred hhccceeeccHHHHHHHhccCCCcccEEEc--CCCc--EEeeCCcccccccccCCCccCCCC-CCChHHHHHHHHHhCCh
Q 017851 203 KEKLAYIALDYEQELETAKTSSAVEKSYEL--PDGQ--VITIGAERFRCPEVLFQPSMIGME-SAGIHETTYNSIMKCDV 277 (365)
Q Consensus 203 k~~~~~v~~~~~~~~~~~~~~~~~~~~~~l--pd~~--~i~i~~~r~~~~E~LF~p~~~~~~-~~~l~~~I~~~i~~~~~ 277 (365)
|+++|||+.+++++++.........+.|.+ |||+ .|.++.+||.+||+||+|++++.+ ..+|+++|.++|.+||+
T Consensus 241 Ke~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~ 320 (427)
T 3dwl_A 241 KEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPI 320 (427)
T ss_dssp HHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCH
T ss_pred HHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCH
Confidence 999999999998887765443333566777 8887 889999999999999999999988 58999999999999999
Q ss_pred hHHHhhhcccccccCccCccChHHHHHHHHHhhC--------------CCCceEEEECCCCCccceeehhhhhhcccccc
Q 017851 278 DIRKDLYGNIVLSGGSTMFPGIADRMSKEISALA--------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQ 343 (365)
Q Consensus 278 d~r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~~--------------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~ 343 (365)
|+|+.|++||+||||+|++|||.+||++||+.+. |...+++|..+++|.+++|+|||++|++++|+
T Consensus 321 dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilasl~~f~ 400 (427)
T 3dwl_A 321 DVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQTPEFG 400 (427)
T ss_dssp HHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHHSTTHH
T ss_pred HHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeeccccchh
Confidence 9999999999999999999999999999999987 45567999999999999999999999999999
Q ss_pred cccccHhHHhhcCccccccccC
Q 017851 344 QMWIAKSEYDESGPSIVHRKCF 365 (365)
Q Consensus 344 ~~~itr~ey~e~G~~i~~~k~~ 365 (365)
++||||+||+|+|++|++||++
T Consensus 401 ~~witk~EYeE~G~~iv~~~~~ 422 (427)
T 3dwl_A 401 SYCHTKADYEEYGASIARRYQI 422 (427)
T ss_dssp HHSEEHHHHHHSCGGGGSCCCC
T ss_pred heeEEHHHHhhhChHhheeccc
Confidence 9999999999999999999974
No 2
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-79 Score=588.16 Aligned_cols=355 Identities=31% Similarity=0.561 Sum_probs=319.0
Q ss_pred CCCCCCCCcEEEeCCCCcEEEeeeCCCCCCCCCCcceEeeCCCCccccCCCccccccch-hhhccCcceeeccccCCccC
Q 017851 1 MADTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDE-AQSKRGILTLKYPIEHGIVS 79 (365)
Q Consensus 1 ~~~~~~~~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~p~~~g~i~ 79 (365)
|..+++.++||||+||+++|+||+|++.|+.++||+++++++.. .+..++|++ +...+..+.+++|+++|+|.
T Consensus 17 ~yggde~~~iVID~GS~~~kaG~ag~~~P~~v~PSvVg~~~~~~------~~~~~vG~e~~~~~r~~l~l~~Pi~~GvI~ 90 (498)
T 3qb0_A 17 VYGGDEVSAVVIDPGSYTTNIGYSGSDFPQSILPSVYGKYTADE------GNKKIFSEQSIGIPRKDYELKPIIENGLVI 90 (498)
T ss_dssp --CCCCBSCEEEECCSSEEEEEETTCSSCSEEEESEEEEESSCS------SCCEECCTTGGGSCCTTEEEEESEETTEES
T ss_pred ccCCCCCCeEEEECCCcEEEEEECCCCCeeeecCceeEEeccCC------CccEEEecHHHhcCcCceEEeccCcCCEEc
Confidence 34688999999999999999999999999999999999987542 456789997 56667889999999999999
Q ss_pred CHHHHHHHHHHhcccccccCCCCC-ceEEecCCCCCHHhHHHHHHHhhccCCCCceecccchhhhhhcC-----------
Q 017851 80 NWDDMEKIWHHTFYNELRVAPEEH-PILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAN----------- 147 (365)
Q Consensus 80 ~~~~~~~~l~~~~~~~L~~~~~~~-~vvl~e~~~~~~~~r~~l~~~lfe~l~~~~v~~~~~~~~a~~~~----------- 147 (365)
|||.++++|+|+|++.|+++|.++ ||++++|+++++..|+++++++||.|+++++++++++++++|++
T Consensus 91 dwd~~E~iw~~~f~~~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~tglVVDiG 170 (498)
T 3qb0_A 91 DWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIG 170 (498)
T ss_dssp CHHHHHHHHHHHHHHTSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCSSEEEEEEC
T ss_pred cHHHHHHHHHHHHHhhhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCCeEEEEEcC
Confidence 999999999999988899999999 99999999999999999999999999999999999999999987
Q ss_pred -CceEEEEeeCCeeCCCceEEecCcHHHHHHHHHHHHHhcC------------------CCccch------h-HHHHHHH
Q 017851 148 -GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERG------------------YSFTTT------A-EREIVRD 201 (365)
Q Consensus 148 -~~t~v~pV~~g~~~~~~~~~~~~gG~~l~~~l~~~l~~~~------------------~~~~~~------~-~~~~~~~ 201 (365)
|.|+|+||++|+++.+++.++++||++++++|.++|++++ +.+... . +.+++++
T Consensus 171 ~g~T~vvPI~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~ 250 (498)
T 3qb0_A 171 HDTCSVSPIVDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQE 250 (498)
T ss_dssp SSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHH
T ss_pred CCcEEEEEEeCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHH
Confidence 6799999999999999999999999999999999998652 333211 2 3458999
Q ss_pred Hhhccceeecc--HHHHHHHhccCCCcccEEEcCCCcEEeeCCc-ccccccccCCCccCCC-------------------
Q 017851 202 MKEKLAYIALD--YEQELETAKTSSAVEKSYELPDGQVITIGAE-RFRCPEVLFQPSMIGM------------------- 259 (365)
Q Consensus 202 ik~~~~~v~~~--~~~~~~~~~~~~~~~~~~~lpd~~~i~i~~~-r~~~~E~LF~p~~~~~------------------- 259 (365)
|||++|||+.+ +++.... ......+.|++|||+.|.++.| ||.+||.||+|+.++.
T Consensus 251 iKE~~c~Va~~~~~~~~~~~--~~~~~~~~yeLPDG~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y 328 (498)
T 3qb0_A 251 CKETLCHICPTKTLEETKTE--LSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDY 328 (498)
T ss_dssp HHHHTCCCCSSCHHHHHHHH--HHTCCCEEEECSSSCEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCC
T ss_pred HHHhhEEecCCccHhHHhhh--ccCcCceEEECCCCCEEEECchHhhhCchhhCCHhHcCCccccccccccccccccccc
Confidence 99999999987 4443221 1233568899999999999999 9999999999987643
Q ss_pred -------------------------------------------------------------CCCChHHHHHHHHHhCChh
Q 017851 260 -------------------------------------------------------------ESAGIHETTYNSIMKCDVD 278 (365)
Q Consensus 260 -------------------------------------------------------------~~~~l~~~I~~~i~~~~~d 278 (365)
+..||+++|.++|.+||+|
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd~d 408 (498)
T 3qb0_A 329 VPLKRTKPSGVNKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVD 408 (498)
T ss_dssp CCCCBCC-----------------------------------------------------CCSCCHHHHHHHHHHTSCTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHHHHHHhCCHH
Confidence 5679999999999999999
Q ss_pred HHHhhhcccccccCccCccChHHHHHHHHHhhCCCCceEEEECC---CCCccceeehhhhhhcccccccccccHhHHhhc
Q 017851 279 IRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAP---PERKYSVWIGGSILASLSTFQQMWIAKSEYDES 355 (365)
Q Consensus 279 ~r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~~~~~~~v~v~~~---~~~~~~~w~Gasi~a~l~~~~~~~itr~ey~e~ 355 (365)
+|+.|++||+|+||+|++|||.+||++||+.++| ..+++|..+ ++|.+++|+|||++|++++|+++||||+||+|+
T Consensus 409 ~r~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p-~~~i~v~~~~~~~er~~s~WiGgsilasl~~f~~~witk~EY~E~ 487 (498)
T 3qb0_A 409 LRATLAHNVVLTGGTSSIPGLSDRLMTELNKILP-SLKFRILTTGHTIERQYQSWLGGSILTSLGTFHQLWVGKKEYEEV 487 (498)
T ss_dssp THHHHHTTEEEESGGGGSTTHHHHHHHHHHHHST-TSCCCEECCSCTGGGGSHHHHHHHHHHTCHHHHHTSEEHHHHHTT
T ss_pred HHHHHhcCEEEeCCccCchhHHHHHHHHHHHhCC-CCeeEEEcCCCCCccCccEEcccEEEecCcchhceEEEHHHHhhh
Confidence 9999999999999999999999999999999999 789999887 789999999999999999999999999999999
Q ss_pred Cc-ccccccc
Q 017851 356 GP-SIVHRKC 364 (365)
Q Consensus 356 G~-~i~~~k~ 364 (365)
|+ +|++|||
T Consensus 488 G~~~iv~~kc 497 (498)
T 3qb0_A 488 GVERLLNDRF 497 (498)
T ss_dssp CCHHHHHHTT
T ss_pred CcHhhccccC
Confidence 99 9999998
No 3
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=4e-74 Score=545.66 Aligned_cols=363 Identities=87% Similarity=1.389 Sum_probs=329.2
Q ss_pred CCCCCCcEEEeCCCCcEEEeeeCCCCCCCCCCcceEeeCCCCccccCCCccccccchhhhccCcceeeccccCCccCCHH
Q 017851 3 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWD 82 (365)
Q Consensus 3 ~~~~~~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~g~i~~~~ 82 (365)
++++.++||||+||+++|+||+|++.|+.++||++++++.+....+.+.+++++|+++...+....+++|+++|.|.||+
T Consensus 1 ~~~~~~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~~~~~~~~Pi~~G~i~d~d 80 (375)
T 2fxu_A 1 DEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWD 80 (375)
T ss_dssp ---CCCCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHTTSEEEECSEETTEECCHH
T ss_pred CCCCCceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcCcccceeccccCCcccCHH
Confidence 35788999999999999999999999999999999998876544444557889999999888889999999999999999
Q ss_pred HHHHHHHHhcccccccCCCCCceEEecCCCCCHHhHHHHHHHhhccCCCCceecccchhhhhhcC------------Cce
Q 017851 83 DMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAN------------GVS 150 (365)
Q Consensus 83 ~~~~~l~~~~~~~L~~~~~~~~vvl~e~~~~~~~~r~~l~~~lfe~l~~~~v~~~~~~~~a~~~~------------~~t 150 (365)
.++.+|+++|++.|++++.++++++++|++++...|+++++++||.+++++++++++|++|+|++ |.|
T Consensus 81 ~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt 160 (375)
T 2fxu_A 81 DMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVT 160 (375)
T ss_dssp HHHHHHHHHHHTTSCCCGGGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCE
T ss_pred HHHHHHHHHHHHhcCCCCcCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCce
Confidence 99999999998889999999999999999999999999999999999999999999999999987 678
Q ss_pred EEEEeeCCeeCCCceEEecCcHHHHHHHHHHHHHhcCCCccchhHHHHHHHHhhccceeeccHHHHHHHhccCCCcccEE
Q 017851 151 HTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 230 (365)
Q Consensus 151 ~v~pV~~g~~~~~~~~~~~~gG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~ 230 (365)
+|+||++|+++.++..++++||++++++|.++|..+++++....+.+.+++||+++||++.+++++++...........|
T Consensus 161 ~v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~ 240 (375)
T 2fxu_A 161 HNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSY 240 (375)
T ss_dssp EEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEE
T ss_pred EEeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEE
Confidence 99999999999999999999999999999999999888876666778999999999999988887766554444456889
Q ss_pred EcCCCcEEeeCCcccccccccCCCccCCCCCCChHHHHHHHHHhCChhHHHhhhcccccccCccCccChHHHHHHHHHhh
Q 017851 231 ELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISAL 310 (365)
Q Consensus 231 ~lpd~~~i~i~~~r~~~~E~LF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~ 310 (365)
.+|||+.+.++.+||.+||.||+|.+++.+..+|+++|.++|.+||+|+|+.+++||+||||+|++|||.+||++||..+
T Consensus 241 ~lpdg~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~ 320 (375)
T 2fxu_A 241 ELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITAL 320 (375)
T ss_dssp ECTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHH
T ss_pred ECCCCCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEECCCCCccceeehhhhhhcccccccccccHhHHhhcCccccccccC
Q 017851 311 APSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 365 (365)
Q Consensus 311 ~~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~ey~e~G~~i~~~k~~ 365 (365)
.|...+++|..+++|.+++|+||+++|+++.|+++||||+||+|+|+++++|||+
T Consensus 321 ~p~~~~v~v~~~~~p~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~~~~~~k~~ 375 (375)
T 2fxu_A 321 APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 375 (375)
T ss_dssp SCTTCCCCEECCTTTTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC----
T ss_pred CCCCeeEEEEcCCCCCccEEcchHHhhCcccHhhceeeHHHHhhhChHHHhhhcc
Confidence 9988889999999999999999999999999999999999999999999999996
No 4
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=7.7e-74 Score=546.49 Aligned_cols=360 Identities=47% Similarity=0.883 Sum_probs=155.5
Q ss_pred CCCCCCcEEEeCCCCcEEEeeeCCCCCCCCCCcceEeeCCCCcc-c-cCCCccccccchhhhccCcceeeccccCCccCC
Q 017851 3 DTEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVM-V-GMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSN 80 (365)
Q Consensus 3 ~~~~~~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~-~-~~~~~~~~~g~~~~~~~~~~~~~~p~~~g~i~~ 80 (365)
.+.+.++||||+||+++|+||+|++.|+.++||+++++++.... . +...+++++|+++...+....+++|+++|+|.|
T Consensus 2 ~~~~~~~ivID~Gs~~~k~G~ag~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~~~~~~~~Pi~~G~i~d 81 (394)
T 1k8k_B 2 DSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSMLEVNYPMENGIVRN 81 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCEEEEECCCCeEEEeeCCCCCcceeccceeEEEcccccccccCCCCCCeEEChHHHhcCCCceeeccccCCEEec
Confidence 34577899999999999999999999999999999998765322 1 223467899999988888888999999999999
Q ss_pred HHHHHHHHHHhc-ccccccCCCCCceEEecCCCCCHHhHHHHHHHhhccCCCCceecccchhhhhhcC------------
Q 017851 81 WDDMEKIWHHTF-YNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAN------------ 147 (365)
Q Consensus 81 ~~~~~~~l~~~~-~~~L~~~~~~~~vvl~e~~~~~~~~r~~l~~~lfe~l~~~~v~~~~~~~~a~~~~------------ 147 (365)
|+.++.+|+|+| ++.|++++.+++|++++|+++++..|+++++++||.++++++++++++++|+|++
T Consensus 82 wd~~e~i~~~~~~~~~L~~~~~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG~ 161 (394)
T 1k8k_B 82 WDDMKHLWDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGD 161 (394)
T ss_dssp ------------------------------------------------------------------------CCEEEECS
T ss_pred HHHHHHHHHHHhcccccCcCCCCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcCC
Confidence 999999999999 8899999999999999999999999999999999999999999999999999987
Q ss_pred CceEEEEeeCCeeCCCceEEecCcHHHHHHHHHHHHHhcCCCccchhHHHHHHHHhhccceeeccHHHHHHHhccCCCcc
Q 017851 148 GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVE 227 (365)
Q Consensus 148 ~~t~v~pV~~g~~~~~~~~~~~~gG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~ 227 (365)
|.|+|+||++|+++.++..++++||++++++|.++|.++++++....+.+.+++||+++||++.++.++++.........
T Consensus 162 g~T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~ 241 (394)
T 1k8k_B 162 GVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241 (394)
T ss_dssp SCEEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred CceEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhccCCcCc
Confidence 67899999999999999999999999999999999999988886656788999999999999988877765543334456
Q ss_pred cEEEcCCCcEEeeCCcccccccccCCCccCCCCCCChHHHHHHHHHhCChhHHHhhhcccccccCccCccChHHHHHHHH
Q 017851 228 KSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI 307 (365)
Q Consensus 228 ~~~~lpd~~~i~i~~~r~~~~E~LF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~g~~~RL~~el 307 (365)
..|++|||+.+.++.+||.+||.||+|+.++.+..+|+++|.++|.+||+|+|+.+++||+||||+|++|||.+||++||
T Consensus 242 ~~~~lpdg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el 321 (394)
T 1k8k_B 242 ESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLEREL 321 (394)
T ss_dssp EEEECTTSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHH
T ss_pred eEEECCCCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhC-----------CCCceEEEECCCCCccceeehhhhhhcccccc-cccccHhHHhhcCcccccc
Q 017851 308 SALA-----------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQ-QMWIAKSEYDESGPSIVHR 362 (365)
Q Consensus 308 ~~~~-----------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~-~~~itr~ey~e~G~~i~~~ 362 (365)
..+. |...+++|..+++|.+++|+|||++|++++|+ ++||||+||+|+|+++++|
T Consensus 322 ~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~~itk~eY~e~G~~~~~~ 388 (394)
T 1k8k_B 322 KQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388 (394)
T ss_dssp HHHHHHHTCSSCCCTTCCCCC----------------------------------------------
T ss_pred HHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCCcCCccceeecHHHHhhhCHHHHHh
Confidence 9987 77778999888999999999999999999999 9999999999999999987
No 5
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.8e-71 Score=555.48 Aligned_cols=358 Identities=20% Similarity=0.371 Sum_probs=281.5
Q ss_pred CCcEEEeCCCCcEEEeeeCCCCCCCCCCcceEeeCCCCcc----------------------------------------
Q 017851 7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVM---------------------------------------- 46 (365)
Q Consensus 7 ~~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~---------------------------------------- 46 (365)
++.||||+||+++|+|||||+.|. .+|+++|++......
T Consensus 15 ~~iIVIdpGS~~~riG~A~d~~P~-~iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (593)
T 4fo0_A 15 NFIIVIHPGSTTLRIGRATDTLPA-SIPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSN 93 (593)
T ss_dssp GGEEEEECCSSEEEEEETTCSSCE-EEECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred CCEEEEeCCCCCeEeeecCCCCCC-eeeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHHHHHHHHHhhhc
Confidence 447999999999999999999997 469999987532110
Q ss_pred ---------------------------------ccCCCccccccchhhhc--cCcceeeccccCC-----------ccCC
Q 017851 47 ---------------------------------VGMGQKDAYVGDEAQSK--RGILTLKYPIEHG-----------IVSN 80 (365)
Q Consensus 47 ---------------------------------~~~~~~~~~~g~~~~~~--~~~~~~~~p~~~g-----------~i~~ 80 (365)
.....+++++|++|... ++.+.+++||++| .+.+
T Consensus 94 ~~r~~~~s~~~~~~~n~~~~p~~i~~~~~~~~~~~~~~~~~~vG~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~~ 173 (593)
T 4fo0_A 94 GTRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVGEEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTAV 173 (593)
T ss_dssp SCCCCCCCHHHHHHHHTTCCCEEEESSCSCCCCCCTTCCSEEETHHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHHH
T ss_pred ccccCCCcHHHhhhhhccCCCcccCCCCccccccccccccccccHHHhhcCCcccceEecCcccCccccccCCccchhcC
Confidence 01123567899999754 5679999999999 5779
Q ss_pred HHHHHHHHHHhcccccccCCCC---CceEEecCCCCCHHhHHHHHHHhhccCCCCceecccchhhhhhcC----------
Q 017851 81 WDDMEKIWHHTFYNELRVAPEE---HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAN---------- 147 (365)
Q Consensus 81 ~~~~~~~l~~~~~~~L~~~~~~---~~vvl~e~~~~~~~~r~~l~~~lfe~l~~~~v~~~~~~~~a~~~~---------- 147 (365)
|+++|++|+|+|+++|++++++ ++||+++|+++++..|+++++++||.|+||+++++++++||+||+
T Consensus 174 wdd~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~tglVVDi 253 (593)
T 4fo0_A 174 LADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTCIVDV 253 (593)
T ss_dssp HHHHHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCceEEEEe
Confidence 9999999999999999998876 899999999999999999999999999999999999999999998
Q ss_pred --CceEEEEeeCCeeCCCceEEecCcHHHHHHHHHHHHHhcCCCcc-----chhHHHHHHHHhhccceeeccHHHH----
Q 017851 148 --GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFT-----TTAEREIVRDMKEKLAYIALDYEQE---- 216 (365)
Q Consensus 148 --~~t~v~pV~~g~~~~~~~~~~~~gG~~l~~~l~~~l~~~~~~~~-----~~~~~~~~~~ik~~~~~v~~~~~~~---- 216 (365)
+.|+|+||+||+++.+++.++++||++++++|.++|..+++.+. ...++.++++||+++|||+.++...
T Consensus 254 G~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~~~~~~ 333 (593)
T 4fo0_A 254 GDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDISGLQDHE 333 (593)
T ss_dssp CSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTTCCSCEEEE
T ss_pred CCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccchHHhhhhh
Confidence 57899999999999999999999999999999999999987654 3457899999999999998654211
Q ss_pred ---------------------HHH----h------------------------------------------ccCCCcccE
Q 017851 217 ---------------------LET----A------------------------------------------KTSSAVEKS 229 (365)
Q Consensus 217 ---------------------~~~----~------------------------------------------~~~~~~~~~ 229 (365)
+.. + .........
T Consensus 334 ~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (593)
T 4fo0_A 334 FQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQEQSAKATADRKS 413 (593)
T ss_dssp EEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSCCEEECC----------------------------------
T ss_pred hhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccccchhhhhcccCcccchhhhhhhhcccchhhhhhccccccc
Confidence 000 0 000112346
Q ss_pred EEcCCCcEEeeCCcccccccccCCCccC--------------------------------CCCCCChHHHHHHHHHhCC-
Q 017851 230 YELPDGQVITIGAERFRCPEVLFQPSMI--------------------------------GMESAGIHETTYNSIMKCD- 276 (365)
Q Consensus 230 ~~lpd~~~i~i~~~r~~~~E~LF~p~~~--------------------------------~~~~~~l~~~I~~~i~~~~- 276 (365)
|..|++..+.++.+|+.+||.||+|... +.+..||+++|.++|.+|+
T Consensus 414 ~~~p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~~~~~ 493 (593)
T 4fo0_A 414 ASKPIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSIDCCSS 493 (593)
T ss_dssp ---------------------------------------------------------CHHHHSCCCHHHHHHHHHHTCSS
T ss_pred ccCCCCcccccccccccCchhccCcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhCCc
Confidence 7889999999999999999999999542 1235799999999999998
Q ss_pred hhHHHhhhcccccccCccCccChHHHHHHHHHhhCCCC-----ceEEEECCC---CCccceeehhhhhhccccccccccc
Q 017851 277 VDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSS-----MKIKVVAPP---ERKYSVWIGGSILASLSTFQQMWIA 348 (365)
Q Consensus 277 ~d~r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~~~~~-----~~v~v~~~~---~~~~~~w~Gasi~a~l~~~~~~~it 348 (365)
.|+|+.|++||+||||+|++|||.+||++||+.+.|.. .+++|+.++ ||.+++|+|||++|++++|+++|||
T Consensus 494 ~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilasL~~f~~~wIt 573 (593)
T 4fo0_A 494 DDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACLDTTQELWIY 573 (593)
T ss_dssp HHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHHCGGGGGTCEE
T ss_pred HHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhcCccHHHeeEC
Confidence 69999999999999999999999999999999999864 358898876 8999999999999999999999999
Q ss_pred HhHHhhcCccccccccC
Q 017851 349 KSEYDESGPSIVHRKCF 365 (365)
Q Consensus 349 r~ey~e~G~~i~~~k~~ 365 (365)
|+||+|+|++||++||+
T Consensus 574 k~EYeE~G~~il~~kc~ 590 (593)
T 4fo0_A 574 QREWQRFGVRMLRERAA 590 (593)
T ss_dssp HHHHHHHTTHHHHHHCS
T ss_pred HHHHHhhCcHHHhhcCC
Confidence 99999999999999995
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=4.4e-68 Score=511.55 Aligned_cols=359 Identities=38% Similarity=0.681 Sum_probs=320.8
Q ss_pred CCCCcEEEeCCCCcEEEeeeCCCCCCCCCCcceEeeCCCCc--------cccCCCccccccchhhhccCcceeeccccCC
Q 017851 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV--------MVGMGQKDAYVGDEAQSKRGILTLKYPIEHG 76 (365)
Q Consensus 5 ~~~~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~g 76 (365)
.+.++||||+||+++|+||+|++.|+.++||++++++.... ..+....++++|+++...+. ..+++|+++|
T Consensus 3 ~~~~~ivID~Gs~~~k~G~~~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~~~-~~~~~pi~~G 81 (418)
T 1k8k_A 3 GRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEKPT-YATKWPIRHG 81 (418)
T ss_dssp CCSCCEEEEECSSEEEEEETTCSSCSEEEESCEEECC-----------CCCTTGGGCEEEGGGGTSCTT-SEEECCEETT
T ss_pred CCCCeEEEECCCCeEEEeeCCCCCCCCcCCceEEEECcccccccccccccccccccCeEEChHHHhcCC-CEEeccccCC
Confidence 35689999999999999999999999999999998876421 11222345899999988764 8899999999
Q ss_pred ccCCHHHHHHHHHHhcccccccCCCCCceEEecCCCCCHHhHHHHHHHhhccCCCCceecccchhhhhhc---------C
Q 017851 77 IVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYA---------N 147 (365)
Q Consensus 77 ~i~~~~~~~~~l~~~~~~~L~~~~~~~~vvl~e~~~~~~~~r~~l~~~lfe~l~~~~v~~~~~~~~a~~~---------~ 147 (365)
.+.||+.++.+|+++|++.|++++.++++++++|++++...|+.+.+++||.+++++++++++|++|+|+ .
T Consensus 82 ~i~d~d~~e~i~~~~~~~~L~~~~~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~ 161 (418)
T 1k8k_A 82 IVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGER 161 (418)
T ss_dssp EESCHHHHHHHHHHHHHTTTCCCGGGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSC
T ss_pred EECCHHHHHHHHHHHHHhccCCCCCCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCC
Confidence 9999999999999999888999999999999999999999999999999999999999999999999988 3
Q ss_pred -----------CceEEEEeeCCeeCCCceEEecCcHHHHHHHHHHHHHhcCCCccchhHHHHHHHHhhccceeeccHHHH
Q 017851 148 -----------GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQE 216 (365)
Q Consensus 148 -----------~~t~v~pV~~g~~~~~~~~~~~~gG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~ 216 (365)
|.|+|+||++|+++.+++.+.++||++++++|.++|.+++..+....+.+.++++|+++|+++.++.++
T Consensus 162 ~~~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e 241 (418)
T 1k8k_A 162 TLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKE 241 (418)
T ss_dssp CCCEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHHH
T ss_pred CCeEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhcccHHHH
Confidence 678999999999999999999999999999999999998887765567789999999999999888776
Q ss_pred HHHhccC-CCcccEEEcCCCc-----EEeeCCcccccccccCCCccCCCCC-CChHHHHHHHHHhCChhHHHhhhccccc
Q 017851 217 LETAKTS-SAVEKSYELPDGQ-----VITIGAERFRCPEVLFQPSMIGMES-AGIHETTYNSIMKCDVDIRKDLYGNIVL 289 (365)
Q Consensus 217 ~~~~~~~-~~~~~~~~lpd~~-----~i~i~~~r~~~~E~LF~p~~~~~~~-~~l~~~I~~~i~~~~~d~r~~l~~nIvl 289 (365)
+++.... ......|.+||+. .+.++.+||.+||.||+|++++.+. .+|+++|.++|.+||+|+|+.+++||+|
T Consensus 242 ~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL 321 (418)
T 1k8k_A 242 FNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVL 321 (418)
T ss_dssp HHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEE
T ss_pred HHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEE
Confidence 6544221 1234689999998 8999999999999999999888774 7999999999999999999999999999
Q ss_pred ccCccCccChHHHHHHHHHhhC----------------CCCceEEEECCCCCccceeehhhhhhcccccccccccHhHHh
Q 017851 290 SGGSTMFPGIADRMSKEISALA----------------PSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKSEYD 353 (365)
Q Consensus 290 ~GG~s~i~g~~~RL~~el~~~~----------------~~~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~~~itr~ey~ 353 (365)
|||+|++|||.+||++||..+. |...+++|..+++|.+++|+|||++|++++|.++||||+||+
T Consensus 322 ~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl~~f~~~~itk~ey~ 401 (418)
T 1k8k_A 322 SGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYE 401 (418)
T ss_dssp ESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTSHHHHHHSEEHHHHH
T ss_pred eCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcCccHhheEEEHHHHh
Confidence 9999999999999999999875 566678999999999999999999999999999999999999
Q ss_pred hcCcccccccc
Q 017851 354 ESGPSIVHRKC 364 (365)
Q Consensus 354 e~G~~i~~~k~ 364 (365)
|+|+++++|||
T Consensus 402 e~G~~~~~~~~ 412 (418)
T 1k8k_A 402 EIGPSICRHNP 412 (418)
T ss_dssp HHCGGGGGCCC
T ss_pred hhCHHHHhhhc
Confidence 99999999976
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=5.3e-58 Score=445.29 Aligned_cols=350 Identities=21% Similarity=0.424 Sum_probs=289.2
Q ss_pred CCCCcEEEeCCCCcEEEeeeCCCCCCCCCCcceEeeCCCCc---------------------------------------
Q 017851 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV--------------------------------------- 45 (365)
Q Consensus 5 ~~~~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~--------------------------------------- 45 (365)
+...+|||.+||.++|+|+|.|..|. .+|++++++.....
T Consensus 38 ~~~~~IVIHpGS~~lRIG~AsD~~P~-~ip~~iA~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~k~rmr~~k 116 (655)
T 4am6_A 38 DPTATIVIHPGSNSIKIGFPKDDHPV-VVPNCVAVPKKWLDLENSEHVENVCLQREQSEEFNNIKSEMEKNFRERMRYYK 116 (655)
T ss_dssp CGGGEEEEECCSSEEEEECTTSSSCE-EEESCEEEEGGGSCCSSSCCCCTTCCCSCCCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCeEEEcCCCcceeeeecCCCCCc-ccceeEEeccccccCCCccccCccccchhhhHHHHHHHHHHHHHHHHHHhhcC
Confidence 44678999999999999999999998 77999987542100
Q ss_pred ----------------------cc---c-------CCCccccccchhhhc-cCcceeeccccCCccC----C-------H
Q 017851 46 ----------------------MV---G-------MGQKDAYVGDEAQSK-RGILTLKYPIEHGIVS----N-------W 81 (365)
Q Consensus 46 ----------------------~~---~-------~~~~~~~~g~~~~~~-~~~~~~~~p~~~g~i~----~-------~ 81 (365)
.. + ....+++||++|..+ +..+.+++|+++|+|. | |
T Consensus 117 ~r~~pn~~e~~~~fN~~~~Pe~i~~~nDp~~~~W~~~~~d~~VGdEA~~~~r~~l~l~~PI~~GvI~~~s~Dy~s~q~~W 196 (655)
T 4am6_A 117 RKVPGNAHEQVVSFNENSKPEIISEKNDPSPIEWIFDDSKLYYGSDALRCVDEKFVIRKPFRGGSFNVKSPYYKSLAELI 196 (655)
T ss_dssp CCCSTTCCSSTTCCEEEECSCCCCSSSSCCSCCCBCCTTSCEEHHHHHTBCTTTEEEECSEETTEECTTCSSCSSHHHHH
T ss_pred CCCCCCCHHHHHHhcCCCCCeECCCCCCccccccccCCCCEEEehHHhhCCccCeEEeccccCCEecccCCccccccccH
Confidence 00 0 012377899999884 6789999999999998 8 9
Q ss_pred HHHHHHHHHhccc-ccccCCC---CCceEEecCCCCCHHhHHHHHHHhhccCCCCceecccchhhhhhcC----------
Q 017851 82 DDMEKIWHHTFYN-ELRVAPE---EHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAN---------- 147 (365)
Q Consensus 82 ~~~~~~l~~~~~~-~L~~~~~---~~~vvl~e~~~~~~~~r~~l~~~lfe~l~~~~v~~~~~~~~a~~~~---------- 147 (365)
|.++.+|+|+|++ +|+++|. ++||++++|+++++..|+++++++||.|++++++++.++++|+|++
T Consensus 197 D~mE~Iw~y~f~~~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGLVVD 276 (655)
T 4am6_A 197 SDVTKLLEHALNSETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVVN 276 (655)
T ss_dssp HHHHHHHHHHHBSSSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEEEEE
T ss_pred HHHHHHHHHHhccccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceEEEc
Confidence 9999999999974 8999986 7999999999999999999999999999999999999999999987
Q ss_pred ---CceEEEEeeCCeeCCCceEEecCcHHHHHHHHHHHHHhcCC-----CccchhHHHHHHHHhhccceee-ccHHHHHH
Q 017851 148 ---GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGY-----SFTTTAEREIVRDMKEKLAYIA-LDYEQELE 218 (365)
Q Consensus 148 ---~~t~v~pV~~g~~~~~~~~~~~~gG~~l~~~l~~~l~~~~~-----~~~~~~~~~~~~~ik~~~~~v~-~~~~~~~~ 218 (365)
|.|+|+||++|+++.+++.++++||++++++|.++|.++++ ++....+.+++++||+++|||+ .++. .
T Consensus 277 iG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~Di~--~- 353 (655)
T 4am6_A 277 IGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVA--V- 353 (655)
T ss_dssp ECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGGGCC--S-
T ss_pred CCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCCCcchHHHHHHHHHheEEEcccchh--h-
Confidence 46899999999999999999999999999999999999987 4566778999999999999994 3321 0
Q ss_pred HhccCCCcccEE--EcCCC----cEEeeCCcccccccccCCCccCCC---------------------------------
Q 017851 219 TAKTSSAVEKSY--ELPDG----QVITIGAERFRCPEVLFQPSMIGM--------------------------------- 259 (365)
Q Consensus 219 ~~~~~~~~~~~~--~lpd~----~~i~i~~~r~~~~E~LF~p~~~~~--------------------------------- 259 (365)
....| ..|++ +.+.++.|||.+||.||.|.+++.
T Consensus 354 -------q~~~f~~r~P~~~~~ky~i~vgdErflaPe~lF~Pei~~~~~~~~~~~~~~~~~~~~s~d~y~~~~nd~~S~~ 426 (655)
T 4am6_A 354 -------QLYNFMNRSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLIRTSSHKNSSLEFQLPESRDLFTNELNDWNSLS 426 (655)
T ss_dssp -------EEEEEEECCSSSCEEEEEEEESSHHHHHHHGGGSTHHHHHTSCCCCCCHHHHTTSCCCBCTTTCCBCSCCCHH
T ss_pred -------hhhcceeccCCCCCcceEEEECCeehhCchhcCChhhcccccccccccchhhhhcCccccccCCCCCCccchh
Confidence 11122 33553 578999999999999999965210
Q ss_pred ----------------------------------------------CCCChHHHHHHHHH-hC-ChhHHH--hhhccccc
Q 017851 260 ----------------------------------------------ESAGIHETTYNSIM-KC-DVDIRK--DLYGNIVL 289 (365)
Q Consensus 260 ----------------------------------------------~~~~l~~~I~~~i~-~~-~~d~r~--~l~~nIvl 289 (365)
...+|..+|.++|. .| ..|.++ ++++||+|
T Consensus 427 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pLdkAIi~SIt~a~~~~d~~k~~~~y~nili 506 (655)
T 4am6_A 427 QFESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENFAPLEKAIVQSIANASITADVTRMNSFYSNILI 506 (655)
T ss_dssp HHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSCSCSCSSCCCCCCHHHHHHHHHHHHHHTSCGGGHHHHHTCEEE
T ss_pred HHhhhccccCCCCccHhhhhhhhhcccccccccccCCcccccccccccccHHHHHHHHHHhhhccccHHHHHHHhhcEEE
Confidence 02588999999998 34 235555 99999999
Q ss_pred ccCccCccChHHHHHHHHHhhCCC--------------------------------------------------------
Q 017851 290 SGGSTMFPGIADRMSKEISALAPS-------------------------------------------------------- 313 (365)
Q Consensus 290 ~GG~s~i~g~~~RL~~el~~~~~~-------------------------------------------------------- 313 (365)
+||+|+||||...|...|...-|.
T Consensus 507 vGggski~g~~~~L~dri~i~rp~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 586 (655)
T 4am6_A 507 VGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLTKEIKDLEGHYVNAPDKTEDENKQILQAQIKEKIVEELEEQH 586 (655)
T ss_dssp ESTTCCCTTHHHHHHHHHHHHSCSTTTBTTHHHHHHHHHHHHHHHHSTTCSCCSSSCCSSTTSTTHHHHHHHHHHHHHHH
T ss_pred EcCcccCccHHHHHHHHHHhhCcccccccccHHHHHHHHHhhhhhhhhhccccccccccchhhhhhhhhhhhhhhhhhhh
Confidence 999999999876665554432211
Q ss_pred -----------CceEEEECCCC---CccceeehhhhhhcccccccccccHhHHhhcCccccccccC
Q 017851 314 -----------SMKIKVVAPPE---RKYSVWIGGSILASLSTFQQMWIAKSEYDESGPSIVHRKCF 365 (365)
Q Consensus 314 -----------~~~v~v~~~~~---~~~~~w~Gasi~a~l~~~~~~~itr~ey~e~G~~i~~~k~~ 365 (365)
..+|+|..+|. |.+.+|+|||++|+++.|+++||||+||+|+|++||++||+
T Consensus 587 ~~~~~~~~~~~~~~i~V~~~p~~~d~~~~~W~GgSvla~l~~f~e~wIt~~Eyde~G~~il~~k~~ 652 (655)
T 4am6_A 587 QNIEHQNGNEHIFPVSIIPPPRDMNPALIIWKGASVLAQIKLVEELFITNSDWDVHGSRILQYKCI 652 (655)
T ss_dssp HHHHHTTSCCCBCCCCEECCCTTSCGGGHHHHHHHHHTTSHHHHHHCEEHHHHHHHGGGGGGTSCS
T ss_pred hhhhhccccCCceeeEEeCCccccCcceeEEecceeeeecccHhheeecHHHHhhhcchheEeccc
Confidence 13478888875 48999999999999999999999999999999999999985
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.97 E-value=4.8e-30 Score=240.30 Aligned_cols=294 Identities=15% Similarity=0.203 Sum_probs=225.9
Q ss_pred CcEEEeCCCCcEEEeeeCCCCCCCCCCcceEeeCCCCccccCCCccccccchhhhcc----CcceeeccccCCccCCHHH
Q 017851 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR----GILTLKYPIEHGIVSNWDD 83 (365)
Q Consensus 8 ~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~~~p~~~g~i~~~~~ 83 (365)
.+|+||+||.++++|++++. |...+||+++.+.+. .+.+++|+++.... ....+.+|+++|.+.+|+.
T Consensus 4 ~~igIDlGT~~s~v~~~~~~-~~~~~PS~v~~~~~~-------~~~~~vG~~A~~~~~~~~~~~~~~~p~~~g~i~~~~~ 75 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG-IVVNEPSVIAIDSTT-------GEILKVGLEAKNMIGKTPATIKAIRPMRDGVIADYTV 75 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE-EEEEEESCEEEETTT-------CCEEEESHHHHTTTTCCCTTEEEECCEETTEESSHHH
T ss_pred ceEEEEcCcCcEEEEECCCC-EEEeeCcEEEEecCC-------CcEEEEcHHHHHhcccCCCCeEEEecCCCCeeCChHH
Confidence 57999999999999998875 666689999876531 23457999987653 3455689999999999999
Q ss_pred HHHHHHHhccccccc-C-CCCCceEEecCCCCCHHhHHHHHHHhhccCCCCceecccchhhhhhcC--------------
Q 017851 84 MEKIWHHTFYNELRV-A-PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAN-------------- 147 (365)
Q Consensus 84 ~~~~l~~~~~~~L~~-~-~~~~~vvl~e~~~~~~~~r~~l~~~lfe~l~~~~v~~~~~~~~a~~~~-------------- 147 (365)
.+++|.+++. ++.. . +...+++++.|..++...|+.+.+ +++..|++.+.++++|.+|++++
T Consensus 76 ~~~i~~~~l~-~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~-a~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvD 153 (344)
T 1jce_A 76 ALVMLRYFIN-KAKGGMNLFKPRVVIGVPIGITDVERRAILD-AGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVD 153 (344)
T ss_dssp HHHHHHHHHH-HHHTSCCSCCCEEEEEECTTCCHHHHHHHHH-HHHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEE
T ss_pred HHHHHHHHHH-HHhhccccCCCeEEEEECCCCCHHHHHHHHH-HHHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEE
Confidence 9999999984 4322 2 446899999999999999998888 57999999999999999998875
Q ss_pred ---CceEEEEeeCCeeCCCceEEecCcHHHHHHHHHHHHHhc-CCCccchhHHHHHHHHhhccceeeccHHHHHHHhccC
Q 017851 148 ---GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER-GYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTS 223 (365)
Q Consensus 148 ---~~t~v~pV~~g~~~~~~~~~~~~gG~~l~~~l~~~l~~~-~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~ 223 (365)
|.|+++++..|.++. ....++||.++++.|.+++.++ +..+ ....+|++|+++|+...+...+
T Consensus 154 iGggttdvsv~~~~~~~~--~~~~~lGG~~id~~l~~~l~~~~~~~~----~~~~ae~~K~~l~~~~~~~~~~------- 220 (344)
T 1jce_A 154 IGGGTTEVAVISLGSIVT--WESIRIAGDEMDEAIVQYVRETYRVAI----GERTAERVKIEIGNVFPSKEND------- 220 (344)
T ss_dssp ECSSCEEEEEEETTEEEE--EEEESCSHHHHHHHHHHHHHHHHCEEC----CHHHHHHHHHHHCBCSCCHHHH-------
T ss_pred eCCCeEEEEEEEcCCEEe--eCCCCccChhHHHHHHHHHHHHhCccc----CHHHHHHHHHHHhccCccccCC-------
Confidence 578899999988763 4678999999999999998764 2211 3567899999999875443211
Q ss_pred CCcccEEEc-----CCCc--EEeeCCcccccccccCCCccCCCCCCChHHHHHHHHHhCChhHHHhhh-cccccccCccC
Q 017851 224 SAVEKSYEL-----PDGQ--VITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLY-GNIVLSGGSTM 295 (365)
Q Consensus 224 ~~~~~~~~l-----pd~~--~i~i~~~r~~~~E~LF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~-~nIvl~GG~s~ 295 (365)
...+.+ .+|. .+.++.+++. .+|.|. ...+.+.|.++|++++.++++.++ ++|+|+||+|+
T Consensus 221 ---~~~~~~~~~~~~~g~~~~~~i~~~~~~---~~~~~~-----~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~ 289 (344)
T 1jce_A 221 ---ELETTVSGIDLSTGLPRKLTLKGGEVR---EALRSV-----VVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSL 289 (344)
T ss_dssp ---HCEEEEEEEETTTTEEEEEEEEHHHHH---HHTHHH-----HHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGC
T ss_pred ---cceEEEeccccCCCCceeEEEeHHHHH---HHHHHH-----HHHHHHHHHHHHHhCCchhccchhhCcEEEECcccc
Confidence 112222 3554 4555555443 344442 134788999999999998888888 79999999999
Q ss_pred ccChHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhhcc-cccc
Q 017851 296 FPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL-STFQ 343 (365)
Q Consensus 296 i~g~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l-~~~~ 343 (365)
+|||.++|++++.. ++..+.+|.+++|.||++++.. +.|+
T Consensus 290 ~p~l~~~l~~~~~~--------~v~~~~~p~~ava~Gaa~~a~~~~~~~ 330 (344)
T 1jce_A 290 LRGLDTLLQKETGI--------SVIRSEEPLTAVAKGAGMVLDKVNILK 330 (344)
T ss_dssp SBTHHHHHHHHHSS--------CEEECSSTTTHHHHHHHHGGGCHHHHT
T ss_pred chHHHHHHHHHHCC--------CccccCChHHHHHHHHHHHHhChHHHH
Confidence 99999999999841 3444668899999999999974 5443
No 9
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.77 E-value=1.8e-19 Score=176.78 Aligned_cols=283 Identities=16% Similarity=0.226 Sum_probs=184.7
Q ss_pred CcEEEeCCCCcEEEeeeCCCCCCCC--------CCcceEeeCCCCccccCCCccccccchhhhcc--Cc---ceeec---
Q 017851 8 QPLVCDNGTGMVKAGFAGDDAPRAV--------FPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR--GI---LTLKY--- 71 (365)
Q Consensus 8 ~~vViD~Gs~~ik~G~ag~~~P~~~--------~ps~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~---~~~~~--- 71 (365)
++|.||+||.++++|++.+..|..+ +||+++.. ..+.++|+++.... +. ..+++
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~----------~~~~~vG~~A~~~~~~~p~~~~~~Kr~lg 72 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFK----------NGERLVGEVAKRQAITNPNTIISIKRHMG 72 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEES----------SSSEEESHHHHTTTTTCSSEEECGGGTTT
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEEC----------CCcEEECHHHHHhHHhCCCcHHHHHHhcC
Confidence 5799999999999999987777655 67777661 22457888875542 11 11222
Q ss_pred -ccc---CCccCCHHHHHHHHHHhcccccc------cCCCCCceEEecCCCCCHHhHHHHHHHhhccCCCCceecccchh
Q 017851 72 -PIE---HGIVSNWDDMEKIWHHTFYNELR------VAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAV 141 (365)
Q Consensus 72 -p~~---~g~i~~~~~~~~~l~~~~~~~L~------~~~~~~~vvl~e~~~~~~~~r~~l~~~lfe~l~~~~v~~~~~~~ 141 (365)
|++ +|. +|+ .++++.+++ ++|. .......++++.|..++...|+.+.+. ++..|++.+.++.+|.
T Consensus 73 ~p~~~~~~g~--~~~-~~ei~a~~L-~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a-~~~AGl~~~~li~Ep~ 147 (509)
T 2v7y_A 73 TDYKVEIEGK--QYT-PQEISAIIL-QYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDA-GRIAGLEVERIINEPT 147 (509)
T ss_dssp SCCCEEETTE--EEC-HHHHHHHHH-HHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHH
T ss_pred CCcEEEECCE--EEc-HHHHHHHHH-HHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEecCHH
Confidence 665 564 333 334444444 2221 123346899999999999999888775 5889999999999999
Q ss_pred hhhhcC-----------------CceEEEEee--CCee-CCCceEEecCcHHHHHHHHHHHHHhc-----CCCccchh--
Q 017851 142 LSLYAN-----------------GVSHTVPIY--EGYA-LPHAILRLDLAGRDLTDALMKILTER-----GYSFTTTA-- 194 (365)
Q Consensus 142 ~a~~~~-----------------~~t~v~pV~--~g~~-~~~~~~~~~~gG~~l~~~l~~~l~~~-----~~~~~~~~-- 194 (365)
+|++++ |.+.++.+. +|.. +.......++||.++++.|.+++.++ +.++....
T Consensus 148 AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~ 227 (509)
T 2v7y_A 148 AAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMA 227 (509)
T ss_dssp HHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCHHH
T ss_pred HHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCHHH
Confidence 998765 445555443 3543 22223446899999999999888653 43332210
Q ss_pred ---HHHHHHHHhhccceeeccHHHHHHHhccCCCcccEEEcC------CC---cEEeeCCcccccccccCCCccCCCCCC
Q 017851 195 ---EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP------DG---QVITIGAERFRCPEVLFQPSMIGMESA 262 (365)
Q Consensus 195 ---~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp------d~---~~i~i~~~r~~~~E~LF~p~~~~~~~~ 262 (365)
-...+|.+|+.++... ...+.+| +| ..+.++.+.| |-+|.|-+ .
T Consensus 228 ~~~l~~~aE~~K~~ls~~~----------------~~~i~l~~~~~~~~G~~~~~~~itr~~f---e~l~~~~~-----~ 283 (509)
T 2v7y_A 228 LQRLKDAAEKAKKELSGVT----------------QTQISLPFISANENGPLHLEMTLTRAKF---EELSAHLV-----E 283 (509)
T ss_dssp HHHHHHHHHHHHHHTTTCS----------------EEEEEEEEEEEETTEEEEEEEEEEHHHH---HHHTHHHH-----H
T ss_pred HHHHHHHHHHHHHhcCCCC----------------cEEEEEeccccCCCCCeeEEEEEEHHHH---HHHHHHHH-----H
Confidence 1345677777766431 1122222 23 2234444333 23444321 2
Q ss_pred ChHHHHHHHHHhCChhHHHhhhcccccccCccCccChHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhhcc
Q 017851 263 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 339 (365)
Q Consensus 263 ~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 339 (365)
.+.+.|.++|+.+.. .+..+++|+|+||+|++|++.++|++++.. .+..+.+|..++|.||+++|..
T Consensus 284 ~i~~~i~~~L~~a~~--~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~--------~~~~~~~p~~aVa~Gaa~~a~~ 350 (509)
T 2v7y_A 284 RTMGPVRQALQDAGL--TPADIDKVILVGGSTRIPAVQEAIKRELGK--------EPHKGVNPDEVVAIGAAIQGGV 350 (509)
T ss_dssp TTHHHHHHHHHHHTC--CGGGCSEEEEESGGGGCHHHHHHHHHHHSS--------CCBCCSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC--ChhHCcEEEEECCcccChHHHHHHHHHhCC--------CcCcCCCchhhhHhhHHHHHHH
Confidence 367888888887753 345678999999999999999999998832 2345678899999999999864
No 10
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.77 E-value=3.2e-18 Score=154.54 Aligned_cols=232 Identities=15% Similarity=0.114 Sum_probs=164.7
Q ss_pred CCcEEEeCCCCcEEEeeeCCCCCCCCCCcceEeeCCCCccccCCCccccccchhhhccCcceeeccccCCccCCHHHHHH
Q 017851 7 IQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEK 86 (365)
Q Consensus 7 ~~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~g~i~~~~~~~~ 86 (365)
.-.+.||+||.++|+.+..++. ..++. + .....|+++|.+.||+..+.
T Consensus 28 ~~~~gIDiGS~s~k~vi~~~~~------~~l~~-----------------~---------~~~~~~l~~g~i~d~~~~~~ 75 (272)
T 3h1q_A 28 PYKVGVDLGTADIVLVVTDQEG------IPVAG-----------------A---------LKWASVVKDGLVVDYIGAIQ 75 (272)
T ss_dssp CCEEEEECCSSEEEEEEECTTC------CEEEE-----------------E---------EEECCCCBTTBCTTHHHHHH
T ss_pred CEEEEEEcccceEEEEEECCCC------cEEEE-----------------E---------eecccccCCCEEEcHHHHHH
Confidence 4478999999999998853221 11111 0 12246889999999999999
Q ss_pred HHHHhccccccc-CCCCCceEEecCCCCCHHhHHHHHHHhhccCCCCceecccchhhhhhcC------------CceEEE
Q 017851 87 IWHHTFYNELRV-APEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAN------------GVSHTV 153 (365)
Q Consensus 87 ~l~~~~~~~L~~-~~~~~~vvl~e~~~~~~~~r~~l~~~lfe~l~~~~v~~~~~~~~a~~~~------------~~t~v~ 153 (365)
+|++++...... ......++++.|.......|+ .++.+++..|++...+..++.++++++ |.|.++
T Consensus 76 ~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~-~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~~~viDiGggst~~~ 154 (272)
T 3h1q_A 76 IVRELKAKVERLLGSELFQAATAIPPGTVGRNAE-ACGHVVAGAGLELVTLVDEPVAAARALGINDGIVVDIGGGTTGIA 154 (272)
T ss_dssp HHHHHHHHHHHHSSSCCCEEEEECCSCC---CTT-HHHHHHHHTTCEEEEEECHHHHHHHHHTCSSEEEEEECSSCEEEE
T ss_pred HHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHH-HHHHHHHHcCCeeeecccHHHHHHHHHcCCCEEEEEECCCcEEEE
Confidence 999998543332 223346667777665554444 666788999999999999999988765 678899
Q ss_pred EeeCCeeCCCceEEecCcHHHHHHHHHHHHHhcCCCccchhHHHHHHHHhhccceeeccHHHHHHHhccCCCcccEEEcC
Q 017851 154 PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP 233 (365)
Q Consensus 154 pV~~g~~~~~~~~~~~~gG~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp 233 (365)
++.+|.++ ....+++||.++++.+.+.+. .+.+.++++|++++.- +.+...
T Consensus 155 ~~~~g~~~--~~~~~~~Gg~~~~~~l~~~l~---------~~~~~ae~~k~~~~~~-----~~~~~~------------- 205 (272)
T 3h1q_A 155 VIEKGKIT--ATFDEPTGGTHLSLVLAGSYK---------IPFEEAETIKKDFSRH-----REIMRV------------- 205 (272)
T ss_dssp EEETTEEE--EECCBSCCHHHHHHHHHHHHT---------CCHHHHHHHHHSSTTH-----HHHHHH-------------
T ss_pred EEECCEEE--EEecCCCcHHHHHHHHHHHhC---------CCHHHHHHHHHhcCCH-----HHHHHH-------------
Confidence 99999887 346789999999999998874 1346788888876621 111110
Q ss_pred CCcEEeeCCcccccccccCCCccCCCCCCChHHHHHHHHHhCChhHHHhhhcccccccCccCccChHHHHHHHHHhhCCC
Q 017851 234 DGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPS 313 (365)
Q Consensus 234 d~~~i~i~~~r~~~~E~LF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~~~~ 313 (365)
.+.++ ..+.+.|.+++++++ ..++|+|+||+|++|||.++|++++.
T Consensus 206 --------------~~~~~---------~~i~~~i~~~l~~~~------~~~~ivL~GG~a~~~~l~~~l~~~l~----- 251 (272)
T 3h1q_A 206 --------------VRPVI---------EKMALIVKEVIKNYD------QTLPVYVVGGTAYLTGFSEEFSRFLG----- 251 (272)
T ss_dssp --------------HHHHH---------HHHHHHHHHHTTTSC------SSCCEEEESGGGGSTTHHHHHHHHHS-----
T ss_pred --------------HHHHH---------HHHHHHHHHHHHhcC------CCCEEEEECCccchhhHHHHHHHHhC-----
Confidence 01111 126677777777776 13589999999999999999999983
Q ss_pred CceEEEECCCCCccceeehhhhhh
Q 017851 314 SMKIKVVAPPERKYSVWIGGSILA 337 (365)
Q Consensus 314 ~~~v~v~~~~~~~~~~w~Gasi~a 337 (365)
.++..+.+|.++.|+||+++|
T Consensus 252 ---~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 252 ---KEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp ---SCCBCCSSGGGHHHHHHHTTC
T ss_pred ---CCccccCChHHHHHHHHHhcC
Confidence 244556789999999999875
No 11
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.70 E-value=3.5e-17 Score=155.06 Aligned_cols=228 Identities=13% Similarity=0.099 Sum_probs=148.0
Q ss_pred HHHHHHHHHHhcc---cccccCCCCCceEEecCCCCCHHhHHHHHHHhhccCCCCceecccchhhhhhcC----------
Q 017851 81 WDDMEKIWHHTFY---NELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAN---------- 147 (365)
Q Consensus 81 ~~~~~~~l~~~~~---~~L~~~~~~~~vvl~e~~~~~~~~r~~l~~~lfe~l~~~~v~~~~~~~~a~~~~---------- 147 (365)
.+....+|+++.. +.++ .....++++.|..++...|+.+.+. ++..|++.+.++.+|.+|++++
T Consensus 113 ~~i~~~~L~~l~~~a~~~~~--~~~~~~vitvP~~~~~~~r~~~~~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~ 189 (383)
T 1dkg_D 113 PQISAEVLKKMKKTAEDYLG--EPVTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRT 189 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHS--SCCCEEEECBCTTCCHHHHHHHHHH-HHHTTCEESCCCBHHHHHHHHHTCCC-CCEEE
T ss_pred HHHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEeccHHHHHHHHHhccCCCCcE
Confidence 3445555655542 1222 3346799999999999999888776 5889999999999999988754
Q ss_pred --------CceEEEEeeCC------eeCC-CceEEecCcHHHHHHHHHHHHHhc-----CCCccchh-----HHHHHHHH
Q 017851 148 --------GVSHTVPIYEG------YALP-HAILRLDLAGRDLTDALMKILTER-----GYSFTTTA-----EREIVRDM 202 (365)
Q Consensus 148 --------~~t~v~pV~~g------~~~~-~~~~~~~~gG~~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~i 202 (365)
|.|.++.+..+ .... ......++||.++++.|.+++.++ +..+.... -...+|++
T Consensus 190 ~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~ 269 (383)
T 1dkg_D 190 IAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKA 269 (383)
T ss_dssp EEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHH
Confidence 45566655432 2111 122346899999999999888754 44432210 13557788
Q ss_pred hhccceeeccHHHHHHHhccCCCcccEEEcCCC-c--EEeeCCcccccccccCCCccCCCCCCChHHHHHHHHHhCChhH
Q 017851 203 KEKLAYIALDYEQELETAKTSSAVEKSYELPDG-Q--VITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDI 279 (365)
Q Consensus 203 k~~~~~v~~~~~~~~~~~~~~~~~~~~~~lpd~-~--~i~i~~~r~~~~E~LF~p~~~~~~~~~l~~~I~~~i~~~~~d~ 279 (365)
|++++..... .-.....+..++| . .+.++.+.|. .+|.|.+ ..+.+.|.++|.+++.
T Consensus 270 K~~ls~~~~~----------~i~i~~~~~~~~G~~~~~~~it~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~-- 329 (383)
T 1dkg_D 270 KIELSSAQQT----------DVNLPYITADATGPKHMNIKVTRAKLE---SLVEDLV-----NRSIELLKVALQDAGL-- 329 (383)
T ss_dssp HHHTTSSSEE----------EEEEEEEEEETTEEEEEEEEEEHHHHH---HHSHHHH-----HHHHHHHHHHHHTTTC--
T ss_pred HHHhCCCCce----------EEEEecccccCCCCeeEEEEEeHHHHH---HHHHHHH-----HHHHHHHHHHHHHcCC--
Confidence 8877753200 0000111233344 2 2344444432 3444421 2367788888888753
Q ss_pred HHhhhcccccccCccCccChHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhhcc
Q 017851 280 RKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 339 (365)
Q Consensus 280 r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 339 (365)
.+..+++|+|+||+|++||+.++|++++.. ++..+.+|..++|.||+++|.+
T Consensus 330 ~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~--------~v~~~~~p~~ava~Gaa~~a~~ 381 (383)
T 1dkg_D 330 SVSDIDDVILVGGQTRMPMVQKKVAEFFGK--------EPRKDVNPDEAVAIGAAVQGGV 381 (383)
T ss_dssp CTTTCCEEEEESGGGGSHHHHHHHHHHHSS--------CCBCSSCTTTHHHHHHHHHTTT
T ss_pred CHhhCCEEEEecCccccHHHHHHHHHHhCC--------CCCCCcChHHHHHHHHHHHHHh
Confidence 345568999999999999999999999842 3455678999999999999865
No 12
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.68 E-value=1.9e-16 Score=150.50 Aligned_cols=287 Identities=16% Similarity=0.152 Sum_probs=169.9
Q ss_pred CCcEEEeCCCCcEEEeeeCCCCCCCC--------CCcceEeeCCCCccccCCCccccccchhhhc--cCcceeeccccCC
Q 017851 7 IQPLVCDNGTGMVKAGFAGDDAPRAV--------FPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK--RGILTLKYPIEHG 76 (365)
Q Consensus 7 ~~~vViD~Gs~~ik~G~ag~~~P~~~--------~ps~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~p~~~g 76 (365)
..+|.||+||.++++++..+..|..+ +||+++... ...++|+++... .......+.+++.
T Consensus 18 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~----------~~~~vG~~A~~~~~~~~~~~~~~~k~~ 87 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTD----------DERLIGDAAKNQVAANPQNTIFDIKRL 87 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECS----------SCEEESHHHHHTGGGCGGGEECCGGGT
T ss_pred CCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeC----------CcEEecHHHHHhhHhCcccCHHHHHHH
Confidence 45799999999999999977766533 255554422 245677766442 1111111112111
Q ss_pred c---------------------------------------cCCHHHHHHHHHHhcc---cccccCCCCCceEEecCCCCC
Q 017851 77 I---------------------------------------VSNWDDMEKIWHHTFY---NELRVAPEEHPILLTEAPLNP 114 (365)
Q Consensus 77 ~---------------------------------------i~~~~~~~~~l~~~~~---~~L~~~~~~~~vvl~e~~~~~ 114 (365)
. +.--+....+++++.. +.++ ..-..++++.|..++
T Consensus 88 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~--~~~~~~vitvP~~~~ 165 (394)
T 3qfu_A 88 IGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLG--TKVTHAVVTVPAYFN 165 (394)
T ss_dssp TTCCTTCHHHHHHHTTCSSEEEEETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCC
T ss_pred hCCCCCcHHHHHHhhcCCeEEEcCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcC--CCcceEEEEECCCCC
Confidence 1 1112333344444431 1222 334689999999999
Q ss_pred HHhHHHHHHHhhccCCCCceecccchhhhhhcC------------------CceEEEEe--eCCeeCCCc-eEEecCcHH
Q 017851 115 KANREKMTQIMFETFNAPAMYVAIQAVLSLYAN------------------GVSHTVPI--YEGYALPHA-ILRLDLAGR 173 (365)
Q Consensus 115 ~~~r~~l~~~lfe~l~~~~v~~~~~~~~a~~~~------------------~~t~v~pV--~~g~~~~~~-~~~~~~gG~ 173 (365)
...|+.+.+.+ +..|++.+.++.+|.+|++++ |.|.++.+ .++.....+ ....++||.
T Consensus 166 ~~~r~~~~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~ 244 (394)
T 3qfu_A 166 DAQRQATKDAG-TIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGE 244 (394)
T ss_dssp HHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHH
T ss_pred HHHHHHHHHHH-HHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChH
Confidence 99998776666 889999999999999998766 34433333 344322112 233689999
Q ss_pred HHHHHHHHHHHhc-----CCCccchhH-----HHHHHHHhhccceeeccHHHHHHHhccCCCcccEEEcC---CCcE--E
Q 017851 174 DLTDALMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELP---DGQV--I 238 (365)
Q Consensus 174 ~l~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp---d~~~--i 238 (365)
++++.|.+++.++ +........ ...++.+|+.+... ....+.++ ++.. +
T Consensus 245 ~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~----------------~~~~~~~~~~~~~~~~~~ 308 (394)
T 3qfu_A 245 DFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQ----------------MSTRIEIDSFVDGIDLSE 308 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTC----------------SEEEEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccC----------------CcEEEEEEeccCCceeEE
Confidence 9999999887531 222211000 12233444333211 11122221 3322 2
Q ss_pred eeCCcccccccccCCCccCCCCCCChHHHHHHHHHhCChhHHHhhhcccccccCccCccChHHHHHHHHHhhCCCCceEE
Q 017851 239 TIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIK 318 (365)
Q Consensus 239 ~i~~~r~~~~E~LF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~~~~~~~v~ 318 (365)
.++.+.| |-++.|. ...+.+.|.++|+++..+ ....++|+|+||+|++|++.++|++.+.. .+
T Consensus 309 ~i~r~~~---~~~~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~~~-------~~ 371 (394)
T 3qfu_A 309 TLTRAKF---EELNLDL-----FKKTLKPVEKVLQDSGLE--KKDVDDIVLVGGSTRIPKVQQLLESYFDG-------KK 371 (394)
T ss_dssp EEEHHHH---HHHHHHH-----HHHTHHHHHHHHHHHTCC--GGGCCEEEEESGGGGSHHHHHHHHHHTTT-------CC
T ss_pred EEEHHHH---HHHHHHH-----HHHHHHHHHHHHHHcCCC--HHHCCEEEEECCccccHHHHHHHHHHcCC-------CC
Confidence 2332222 2223321 123677788888877544 45678999999999999999999988832 24
Q ss_pred EECCCCCccceeehhhhhhcc
Q 017851 319 VVAPPERKYSVWIGGSILASL 339 (365)
Q Consensus 319 v~~~~~~~~~~w~Gasi~a~l 339 (365)
+..+.+|..++|.||+++|.+
T Consensus 372 v~~~~~p~~ava~Gaa~~a~~ 392 (394)
T 3qfu_A 372 ASKGINPDEAVAYGAAVQAGV 392 (394)
T ss_dssp CBCCSCTTTHHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHHh
Confidence 556678899999999999864
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.58 E-value=4.2e-15 Score=141.74 Aligned_cols=288 Identities=17% Similarity=0.174 Sum_probs=167.5
Q ss_pred CCCcEEEeCCCCcEEEeeeCCCCCCC--------CCCcceEeeCCCCccccCCCccccccchhhhcc--CcceeeccccC
Q 017851 6 DIQPLVCDNGTGMVKAGFAGDDAPRA--------VFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR--GILTLKYPIEH 75 (365)
Q Consensus 6 ~~~~vViD~Gs~~ik~G~ag~~~P~~--------~~ps~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~p~~~ 75 (365)
.+.+|-||+||.++++++..+..|.. .+||+++.. ....++|+++.... ......+.+++
T Consensus 22 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~----------~~~~~vG~~A~~~~~~~~~~~~~~~Kr 91 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT----------DTERLIGDAAKNQVAMNPTNTIFDAKR 91 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEEC----------SSCEEETHHHHHTTTTCSTTEECCGGG
T ss_pred cCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEEC----------CCCEEecHHHHHhhHhChhhhHHHHHH
Confidence 35689999999999999987665542 235544432 22456777664421 11112222222
Q ss_pred Ccc---------------------------------------CCHHHHHHHHHHhcc---cccccCCCCCceEEecCCCC
Q 017851 76 GIV---------------------------------------SNWDDMEKIWHHTFY---NELRVAPEEHPILLTEAPLN 113 (365)
Q Consensus 76 g~i---------------------------------------~~~~~~~~~l~~~~~---~~L~~~~~~~~vvl~e~~~~ 113 (365)
..- .-.+....+++++.. +.++ ..-..++++.|..+
T Consensus 92 ~lg~~~~~~~~~~~~~~~p~~~~~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~--~~~~~~vitvPa~~ 169 (404)
T 3i33_A 92 LIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLG--GKVHSAVITVPAYF 169 (404)
T ss_dssp TTTCCTTSHHHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHS--SCCCEEEEEECTTC
T ss_pred HhCCCCCcHHHHHHHhhCCceEEccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhc--cCCCcEEEEECCCC
Confidence 111 112333344444421 1222 23457999999999
Q ss_pred CHHhHHHHHHHhhccCCCCceecccchhhhhhcC---------------------CceEEEEe--eCCee-CCCceEEec
Q 017851 114 PKANREKMTQIMFETFNAPAMYVAIQAVLSLYAN---------------------GVSHTVPI--YEGYA-LPHAILRLD 169 (365)
Q Consensus 114 ~~~~r~~l~~~lfe~l~~~~v~~~~~~~~a~~~~---------------------~~t~v~pV--~~g~~-~~~~~~~~~ 169 (365)
+...|+.+.+. ++..|++.+.++.+|.+|++++ |.|.++.+ .+|.. +.......+
T Consensus 170 ~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~ 248 (404)
T 3i33_A 170 NDSQRQATKDA-GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTH 248 (404)
T ss_dssp CHHHHHHHHHH-HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETT
T ss_pred CHHHHHHHHHH-HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCC
Confidence 99999877665 7889999999999999998775 23344333 23322 122233468
Q ss_pred CcHHHHHHHHHHHHHhc-----CCCccchhH-----HHHHHHHhhccceeeccHHHHHHHhccCCCcccEEEc---CCCc
Q 017851 170 LAGRDLTDALMKILTER-----GYSFTTTAE-----REIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYEL---PDGQ 236 (365)
Q Consensus 170 ~gG~~l~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~l---pd~~ 236 (365)
+||.++++.+.+++.++ +..+..... ...++.+|+.++.. ....+.+ .++.
T Consensus 249 lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~----------------~~~~~~~~~~~~g~ 312 (404)
T 3i33_A 249 LGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSS----------------TQASIEIDSLYEGV 312 (404)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTS----------------SEEEEEEEEEETTE
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcC----------------cceEEEEeeccCCc
Confidence 99999999998887432 222211100 12334444443211 1111221 1232
Q ss_pred E--EeeCCcccccccccCCCccCCCCCCChHHHHHHHHHhCChhHHHhhhcccccccCccCccChHHHHHHHHHhhCCCC
Q 017851 237 V--ITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSS 314 (365)
Q Consensus 237 ~--i~i~~~r~~~~E~LF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~~~~~ 314 (365)
. +.++.+.| |-++.|. ...+.+.|.++|+.+..+ ....+.|+|+||+|++|++.++|++.+..
T Consensus 313 ~~~~~i~r~~~---~~~~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~~~----- 377 (404)
T 3i33_A 313 DFYTSITRARF---EELNADL-----FRGTLEPVEKALRDAKLD--KGQIQEIVLVGGSTRIPKIQKLLQDFFNG----- 377 (404)
T ss_dssp EEEEEEEHHHH---HHHTHHH-----HHHTHHHHHHHHHHHTCC--GGGCCEEEEESGGGGCHHHHHHHHHHTTT-----
T ss_pred eeEEEEcHHHH---HHHHHHH-----HHHHHHHHHHHHHHcCCC--HhhCCEEEEECCccccHHHHHHHHHHcCC-----
Confidence 2 23332222 2233331 123567777777765432 34568899999999999999999988732
Q ss_pred ceEEEECCCCCccceeehhhhhhcc
Q 017851 315 MKIKVVAPPERKYSVWIGGSILASL 339 (365)
Q Consensus 315 ~~v~v~~~~~~~~~~w~Gasi~a~l 339 (365)
.++..+.+|..+++.||+++|.+
T Consensus 378 --~~v~~~~~p~~ava~Gaa~~a~~ 400 (404)
T 3i33_A 378 --KELNKSINPDEAVAYGAAVQAAI 400 (404)
T ss_dssp --CCCBCSSCTTTHHHHHHHHHHHH
T ss_pred --CCCCCCcCHHHHHHHHHHHHHHH
Confidence 23455678899999999999865
No 14
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.40 E-value=9e-13 Score=131.62 Aligned_cols=203 Identities=16% Similarity=0.184 Sum_probs=129.5
Q ss_pred CCceEEecCCCCCHHhHHHHHHHhhccCCCCceecccchhhhhhcC------------------CceEEEEee------C
Q 017851 102 EHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAN------------------GVSHTVPIY------E 157 (365)
Q Consensus 102 ~~~vvl~e~~~~~~~~r~~l~~~lfe~l~~~~v~~~~~~~~a~~~~------------------~~t~v~pV~------~ 157 (365)
-..++++.|..+....|+.+.+. .+..|++.+.++.+|.+|++++ |.+.++.+. +
T Consensus 135 v~~~VitVPa~f~d~qr~a~~~A-~~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~ 213 (605)
T 2kho_A 135 VTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGE 213 (605)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTS
T ss_pred CcEEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCC
Confidence 35788999999998888866665 5668999999999999988765 334444443 3
Q ss_pred Cee-CCCceEEecCcHHHHHHHHHHHHHhc-----CCCccchh-----HHHHHHHHhhccceeeccHHHHHHHhccCCCc
Q 017851 158 GYA-LPHAILRLDLAGRDLTDALMKILTER-----GYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAV 226 (365)
Q Consensus 158 g~~-~~~~~~~~~~gG~~l~~~l~~~l~~~-----~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~ 226 (365)
|.. +.......++||.++++.|.+++.++ +.++.... -...+|.+|+.++...
T Consensus 214 g~~~v~a~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~---------------- 277 (605)
T 2kho_A 214 KTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQ---------------- 277 (605)
T ss_dssp CEEEEEEEEEESSCSGGGTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSS----------------
T ss_pred CeEEEEEECCCCCccHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCC----------------
Confidence 432 11122345899999999998887643 33332210 0234566666555321
Q ss_pred ccEEEcC------CC-c--EEeeCCcccccccccCCCccCCCCCCChHHHHHHHHHhCChhHHHhhhcccccccCccCcc
Q 017851 227 EKSYELP------DG-Q--VITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFP 297 (365)
Q Consensus 227 ~~~~~lp------d~-~--~i~i~~~r~~~~E~LF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~ 297 (365)
...+.+| +| . .+.++.+.| |-++.|- ...+.+.|.++++.+.. ...-++.|+|+||+|++|
T Consensus 278 ~~~i~l~~~~~~~~G~~~~~~~itr~~f---e~l~~~~-----~~~i~~~i~~~L~~a~~--~~~~i~~VvLvGG~srip 347 (605)
T 2kho_A 278 QTDVNLPYITADATGPKHMNIKVTRAKL---ESLVEDL-----VNRSIEPLKVALQDAGL--SVSDIDDVILVGGQTRMP 347 (605)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEHHHH---HTTCCST-----TGGGTSHHHHHHHTTTC--CTTTCSEEEEESGGGGSH
T ss_pred ceEEEecccccCCCCceEEEEEEeHHHH---HHHHHHH-----HHHHHHHHHHHHHHcCC--ChhhCceEEEECCcccCh
Confidence 1122222 22 1 123333332 2334432 12367788888887742 234468899999999999
Q ss_pred ChHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhhcc
Q 017851 298 GIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 339 (365)
Q Consensus 298 g~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 339 (365)
++.++|++.+.. .+..+.+|..+++.||+++|..
T Consensus 348 ~v~~~l~~~fg~--------~~~~~~npd~aVA~GAa~~a~~ 381 (605)
T 2kho_A 348 MVQKKVAEFFGK--------EPRKDVNPDEAVAIGAAVQGGV 381 (605)
T ss_dssp HHHHHHHHHHSS--------CCBCSSCTTTHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCC--------CcCcCCCcchHHHHHHHHHHHH
Confidence 999999988831 2345667899999999999864
No 15
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.39 E-value=2.9e-12 Score=126.67 Aligned_cols=203 Identities=16% Similarity=0.194 Sum_probs=127.3
Q ss_pred CceEEecCCCCCHHhHHHHHHHhhccCCCCceecccchhhhhhcC-------------------CceEEEEee--CCee-
Q 017851 103 HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAN-------------------GVSHTVPIY--EGYA- 160 (365)
Q Consensus 103 ~~vvl~e~~~~~~~~r~~l~~~lfe~l~~~~v~~~~~~~~a~~~~-------------------~~t~v~pV~--~g~~- 160 (365)
..++++.|..++...|+.+.+ .++..|++.+.++.+|.+|++++ |.+.++.+. +|..
T Consensus 140 ~~~VitVPa~f~~~qr~a~~~-A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~ 218 (554)
T 1yuw_A 140 TNAVVTVPAYFNDSQRQATKD-AGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFE 218 (554)
T ss_dssp CEEEEEECTTCCHHHHHHHHH-HHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEE
T ss_pred CeEEEEECCCCCHHHHHHHHH-HHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEE
Confidence 578999999999988887766 56778999999999999988765 334444443 5643
Q ss_pred CCCceEEecCcHHHHHHHHHHHHHh-----cCCCccchh-----HHHHHHHHhhccceeeccHHHHHHHhccCCCcccEE
Q 017851 161 LPHAILRLDLAGRDLTDALMKILTE-----RGYSFTTTA-----EREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSY 230 (365)
Q Consensus 161 ~~~~~~~~~~gG~~l~~~l~~~l~~-----~~~~~~~~~-----~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~ 230 (365)
+........+||.++++.|.+++.. .+.++.... -...+|.+|+.++... ...+
T Consensus 219 v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~----------------~~~i 282 (554)
T 1yuw_A 219 VKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSST----------------QASI 282 (554)
T ss_dssp EEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSS----------------EEEE
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCc----------------eEEE
Confidence 2223344689999999999887753 233332111 0234556666554321 1222
Q ss_pred EcC---CCc--EEeeCCcccccccccCCCccCCCCCCChHHHHHHHHHhCChhHHHhhhcccccccCccCccChHHHHHH
Q 017851 231 ELP---DGQ--VITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSK 305 (365)
Q Consensus 231 ~lp---d~~--~i~i~~~r~~~~E~LF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~g~~~RL~~ 305 (365)
.++ +|. .+.++.+.| |-++.|- ...+.+.|.++++.+. +.+.-.+.|+|+||+|++|++.++|++
T Consensus 283 ~i~~~~~g~~~~~~ltr~~~---e~l~~~~-----~~~i~~~i~~~L~~a~--~~~~~i~~VvLvGG~srip~v~~~l~~ 352 (554)
T 1yuw_A 283 EIDSLYEGIDFYTSITRARF---EELNADL-----FRGTLDPVEKALRDAK--LDKSQIHDIVLVGGSTRIPKIQKLLQD 352 (554)
T ss_dssp EETTCSSSCCEEEEEEHHHH---HHHTHHH-----HHHTTHHHHHHHHHTT--CCGGGCCEEEEESGGGGCHHHHHHHHH
T ss_pred EEeeccCCceEEEEEEHHHH---HHHHHHH-----HHHHHHHHHHHHHHcC--CChhhCcEEEEECCcccChHHHHHHHH
Confidence 332 232 222332222 1223221 0124566777777653 223456889999999999999999998
Q ss_pred HHHhhCCCCceEEEECCCCCccceeehhhhhhcc
Q 017851 306 EISALAPSSMKIKVVAPPERKYSVWIGGSILASL 339 (365)
Q Consensus 306 el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 339 (365)
.+... ++..+.+|..+++.||+++|..
T Consensus 353 ~f~~~-------~v~~~~np~~aVA~Gaa~~a~~ 379 (554)
T 1yuw_A 353 FFNGK-------ELNKSINPDEAVAYGAAVQAAI 379 (554)
T ss_dssp HTTTC-------CCBCCSCTTTHHHHHHHHHHHH
T ss_pred HcCCC-------ccccCCCchhHHHHHHHHHHHH
Confidence 77421 3345668899999999999853
No 16
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.24 E-value=2.5e-11 Score=122.25 Aligned_cols=201 Identities=9% Similarity=0.168 Sum_probs=126.2
Q ss_pred CceEEecCCCCCHHhHHHHHHHhhccCCCCceecccchhhhhhcC------------------------CceEEEEe--e
Q 017851 103 HPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAN------------------------GVSHTVPI--Y 156 (365)
Q Consensus 103 ~~vvl~e~~~~~~~~r~~l~~~lfe~l~~~~v~~~~~~~~a~~~~------------------------~~t~v~pV--~ 156 (365)
..++++.|..++...|+.+.+ ..+..|++.+.++.+|.+|++++ |.+.++.+ .
T Consensus 139 ~~~VITVPa~f~~~qR~a~~~-Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~ 217 (675)
T 3d2f_A 139 TDVCIAVPPWYTEEQRYNIAD-AARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFK 217 (675)
T ss_dssp CEEEEEECTTCCHHHHHHHHH-HHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEE
T ss_pred ceEEEEECCCCCHHHHHHHHH-HHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEec
Confidence 578999999999988887666 45678999999999999887643 23334333 2
Q ss_pred CCee-CCCceEEecCcHHHHHHHHHHHHHh-----cCCCccchh-H----HHHHHHHhhccceeeccHHHHHHHhccCCC
Q 017851 157 EGYA-LPHAILRLDLAGRDLTDALMKILTE-----RGYSFTTTA-E----REIVRDMKEKLAYIALDYEQELETAKTSSA 225 (365)
Q Consensus 157 ~g~~-~~~~~~~~~~gG~~l~~~l~~~l~~-----~~~~~~~~~-~----~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~ 225 (365)
+|.. +........+||.++++.|.+++.. .+.++.... . ...++.+|+.++...
T Consensus 218 ~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~--------------- 282 (675)
T 3d2f_A 218 KGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANT--------------- 282 (675)
T ss_dssp TTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCS---------------
T ss_pred CCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCC---------------
Confidence 5643 2222234689999999999988853 233322110 0 234556666544210
Q ss_pred cccEEEcC---CCc--EEeeCCccc-ccccccCCCccCCCCCCChHHHHHHHHHhCChhHHHhhhcccccccCccCccCh
Q 017851 226 VEKSYELP---DGQ--VITIGAERF-RCPEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGI 299 (365)
Q Consensus 226 ~~~~~~lp---d~~--~i~i~~~r~-~~~E~LF~p~~~~~~~~~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~g~ 299 (365)
...+.++ ++. .+.++.+.| ...+.++. .+.+.|.+++..... ...-++.|+|+||+|++|++
T Consensus 283 -~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~---------~i~~~i~~~L~~a~l--~~~~I~~VvLvGGssriP~v 350 (675)
T 3d2f_A 283 -NAPFSVESVMNDVDVSSQLSREELEELVKPLLE---------RVTEPVTKALAQAKL--SAEEVDFVEIIGGTTRIPTL 350 (675)
T ss_dssp -EEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHT---------TTTHHHHHHHHHHTC--CGGGCCEEEEESGGGGSHHH
T ss_pred -ceEEEEeeeccCceEEEEEeHHHHHHHHHHHHH---------HHHHHHHHHHHHhCC--ChhhCcEEEEECCCccChHH
Confidence 1122222 121 233333322 22233333 366777777776532 12235789999999999999
Q ss_pred HHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhhcc
Q 017851 300 ADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 339 (365)
Q Consensus 300 ~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 339 (365)
.++|++.+.. .+..+.+|..++..||+++|..
T Consensus 351 ~~~l~~~fg~--------~~~~~~nPdeaVA~GAa~~a~~ 382 (675)
T 3d2f_A 351 KQSISEAFGK--------PLSTTLNQDEAIAKGAAFICAI 382 (675)
T ss_dssp HHHHHHHHTS--------CEECCSCTTTHHHHHHHHHHHH
T ss_pred HHHHHHhcCC--------CccccCCcchHHHHHHHHHHHH
Confidence 9999988731 3445678899999999998753
No 17
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.20 E-value=1.3e-11 Score=117.67 Aligned_cols=224 Identities=13% Similarity=0.138 Sum_probs=130.2
Q ss_pred HHHHHHHHHhcc---cccccCCCCCceEEecCCCCCHHhHHHHHHHhhccCCCCceecccchhhhhhcC-----------
Q 017851 82 DDMEKIWHHTFY---NELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAN----------- 147 (365)
Q Consensus 82 ~~~~~~l~~~~~---~~L~~~~~~~~vvl~e~~~~~~~~r~~l~~~lfe~l~~~~v~~~~~~~~a~~~~----------- 147 (365)
+....+|+++.. ..++ .....++++.|..+....|+.+.+. .+..|+..+.++.+|.+|++++
T Consensus 129 ev~~~~L~~l~~~a~~~~~--~~~~~~vitvPa~~~~~~r~~~~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~ 205 (409)
T 4gni_A 129 EIATRYLRRLVGAASEYLG--KKVTSAVITIPTNFTEKQKAALIAA-AAAADLEVLQLISEPAAAVLAYDARPEATISDK 205 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHT--SCCCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHTTC------CCE
T ss_pred HHHHHHHHHHHHHHHHHhC--CCCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEEcCHHHHHHHHhcccccCCCCC
Confidence 445556665542 2232 3446789999999998888765554 5667899999999999998776
Q ss_pred ---------CceEEEE--eeCCeeC-CCceEEecCcHHHHHHHHHHHHHhc-----C--CCccchh-H----HHHHHHHh
Q 017851 148 ---------GVSHTVP--IYEGYAL-PHAILRLDLAGRDLTDALMKILTER-----G--YSFTTTA-E----REIVRDMK 203 (365)
Q Consensus 148 ---------~~t~v~p--V~~g~~~-~~~~~~~~~gG~~l~~~l~~~l~~~-----~--~~~~~~~-~----~~~~~~ik 203 (365)
|.|.++. +.+|..- .......++||.++++.|.+++..+ + .+..... . ...+|.+|
T Consensus 206 ~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K 285 (409)
T 4gni_A 206 IIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTK 285 (409)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHH
Confidence 2333332 2233211 1111236899999999999888642 1 1111100 0 12344444
Q ss_pred hccceeeccHHHHHHHhccCCCcccEEEcC---CCcE--EeeCCcccccccccCCCccCCCCCCChHHHHHHHHHhCChh
Q 017851 204 EKLAYIALDYEQELETAKTSSAVEKSYELP---DGQV--ITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMKCDVD 278 (365)
Q Consensus 204 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~lp---d~~~--i~i~~~r~~~~E~LF~p~~~~~~~~~l~~~I~~~i~~~~~d 278 (365)
+.+..- ....+.++ ++.. +.++.+.| |-++.|- ...+.+.|.+++++...
T Consensus 286 ~~ls~~----------------~~~~i~i~~~~~~~~~~~~itr~~~---~~~~~~~-----~~~i~~~i~~~l~~~~~- 340 (409)
T 4gni_A 286 RALSRS----------------TNASFSVESLIDGLDFASTINRLRY---ETIARTV-----FEGFNRLVESAVKKAGL- 340 (409)
T ss_dssp HHHHHS----------------SEEEEEEEEEETTEEEEEEEEHHHH---HHHTHHH-----HHHHHHHHHHHHHHTTC-
T ss_pred HhCCCC----------------CceEEEeecccCCcceEEEeeHHHH---HHHHHHH-----HHHHHHHHHHHHHHcCC-
Confidence 433210 11112221 2222 22222211 2233331 11255666677766532
Q ss_pred HHHhhhcccccccCccCccChHHHHHHHHHhhCCCCceEEE------ECCCCCccceeehhhhhhccc
Q 017851 279 IRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKV------VAPPERKYSVWIGGSILASLS 340 (365)
Q Consensus 279 ~r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~~~~~~~v~v------~~~~~~~~~~w~Gasi~a~l~ 340 (365)
.....+.|+|+||+|++|++.++|++.+.. .+++ ....+|..++-.||++++...
T Consensus 341 -~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~------~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~ 401 (409)
T 4gni_A 341 -DPLDVDEVIMSGGTSNTPRIAANFRYIFPE------STRILAPSTDPSALNPSELQARGAALQASLI 401 (409)
T ss_dssp -CGGGCCEEEEESGGGGCHHHHHHHHHHSCT------TSEEESTTTCTTCCCTTTHHHHHHHHHHHHH
T ss_pred -CHHHCCEEEEECCccccHHHHHHHHHHcCC------ccccccccccCCCcCHHHHHHHHHHHHhhhh
Confidence 234468899999999999999999987732 2355 344678999999999998764
No 18
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.13 E-value=4.8e-10 Score=105.58 Aligned_cols=155 Identities=14% Similarity=0.204 Sum_probs=93.5
Q ss_pred HHhhccCCCCceecccchhhhhhcC-------------------CceEEEEeeCCeeCCCceEEecCcHHHHHHHHHHHH
Q 017851 123 QIMFETFNAPAMYVAIQAVLSLYAN-------------------GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKIL 183 (365)
Q Consensus 123 ~~lfe~l~~~~v~~~~~~~~a~~~~-------------------~~t~v~pV~~g~~~~~~~~~~~~gG~~l~~~l~~~l 183 (365)
.-+++..|++-..+..+|+++++++ |.|.++.+.+|.+.. ....++||.++++.+.+.+
T Consensus 157 ~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~--~~~~~~GG~~i~~~i~~~~ 234 (377)
T 2ych_A 157 LEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLA--VRVLTLSGKDFTEAIARSF 234 (377)
T ss_dssp HHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEE--EEEESCSHHHHHHHHHHHT
T ss_pred HHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEE--EEeeechHHHHHHHHHHHh
Confidence 3345778999999999999887653 577888889998763 4678999999999988743
Q ss_pred HhcCCCccchhHHHHHHHHhhccceeeccHHHHHHHhccCCCcccEEEcCCCcEEeeCCccc-ccccccCCCccCCCCCC
Q 017851 184 TERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERF-RCPEVLFQPSMIGMESA 262 (365)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~lpd~~~i~i~~~r~-~~~E~LF~p~~~~~~~~ 262 (365)
+. +.+.+|++|.++++...+..++ ...+.+|+ ..+.++.+.+ .+.+.++ .
T Consensus 235 ---~~------~~~~aE~~K~~~~~~~~~~~~~----------~~~i~~~~-~~~~i~~~~~~~~i~~~~---------~ 285 (377)
T 2ych_A 235 ---NL------DLLAAEEVKRTYGMATLPTEDE----------ELLLDFDA-ERERYSPGRIYDAIRPVL---------V 285 (377)
T ss_dssp ---TC------CHHHHHHHHHHTC------------------------------------CHHHHHHHHH---------H
T ss_pred ---CC------CHHHHHHHHhhccccccccccc----------cccccccc-ccccCCHHHHHHHHHHHH---------H
Confidence 22 2467899999888764321100 01112222 1222222111 1111111 1
Q ss_pred ChHHHHHHHHHhCChhHHHhhhcccccccCccCccChHHHHHHHHH
Q 017851 263 GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEIS 308 (365)
Q Consensus 263 ~l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~g~~~RL~~el~ 308 (365)
.+.+.|.++++.++...+....++|+||||+|++||+.++|.+++.
T Consensus 286 ~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~ 331 (377)
T 2ych_A 286 ELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLG 331 (377)
T ss_dssp HHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhC
Confidence 2556666777665545556678999999999999999999999984
No 19
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.12 E-value=7.6e-11 Score=109.73 Aligned_cols=167 Identities=13% Similarity=0.081 Sum_probs=111.8
Q ss_pred CcEEEeCCCCcEEEeeeCCCCCCCCCCcceEeeCCCCcccc--------C------CCccccccchhhhccCcceeeccc
Q 017851 8 QPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG--------M------GQKDAYVGDEAQSKRGILTLKYPI 73 (365)
Q Consensus 8 ~~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~~~~--------~------~~~~~~~g~~~~~~~~~~~~~~p~ 73 (365)
-.+-||+|+.++|+-. ++.. ...+||.++.........+ . ..+.+.+|+++. +|+
T Consensus 22 ~~igiDlG~~~tkv~~-~~g~-~~~~PSvva~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~vG~~A~---------~~l 90 (346)
T 2fsj_A 22 VVVGLDVGYGDTKVIG-VDGK-RIIFPSRWAVTETESWGIGGKIPVLSTDGGQTKFIYGKYASGNNIR---------VPQ 90 (346)
T ss_dssp EEEEEEECSSEEEEEC-GGGC-EEEEESCEEEECCSCC----CCCCBBSSTTSSEEEEGGGCCSSCCB---------CCS
T ss_pred EEEEEecCCcceeEEe-cCCC-EEEecceeeeccccccCcCcceEEEEecccccccCCcEEEEcccee---------ccc
Confidence 3589999999999864 3322 3468888876554321000 0 135667887663 899
Q ss_pred cCCccCCHHHHHHHHHHhccccc-ccCCCCCceE--EecCCCCCHHhHHHHHHHhhcc-------------CCCCceecc
Q 017851 74 EHGIVSNWDDMEKIWHHTFYNEL-RVAPEEHPIL--LTEAPLNPKANREKMTQIMFET-------------FNAPAMYVA 137 (365)
Q Consensus 74 ~~g~i~~~~~~~~~l~~~~~~~L-~~~~~~~~vv--l~e~~~~~~~~r~~l~~~lfe~-------------l~~~~v~~~ 137 (365)
+.|.+.+ +..+.++.+.+.+.. ........++ ++.|.......|+.+.+.+... +++..+.++
T Consensus 91 ~~~~~~~-~~~~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li 169 (346)
T 2fsj_A 91 GDGRLAS-KEAFPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMR 169 (346)
T ss_dssp STTCTTS-TTTHHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEE
T ss_pred CCCcccC-hhHHHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEE
Confidence 9999988 777777777764332 1112234688 8888877777777777765542 235779999
Q ss_pred cchhhhhhcC--------------------CceEEEEee--CCeeCCCceEEecCcHHHHHHHHHHHHHhc
Q 017851 138 IQAVLSLYAN--------------------GVSHTVPIY--EGYALPHAILRLDLAGRDLTDALMKILTER 186 (365)
Q Consensus 138 ~~~~~a~~~~--------------------~~t~v~pV~--~g~~~~~~~~~~~~gG~~l~~~l~~~l~~~ 186 (365)
++|.+|++++ |.|.++.+. +|.++......+++||.++++.+.+.++++
T Consensus 170 ~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lGg~~i~~~I~~~i~~~ 240 (346)
T 2fsj_A 170 PQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKE 240 (346)
T ss_dssp ETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCCHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchhHHHHHHHHHHHHHHH
Confidence 9999888751 445666665 676655556788999999999988877643
No 20
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.08 E-value=2.1e-10 Score=114.53 Aligned_cols=224 Identities=15% Similarity=0.137 Sum_probs=125.0
Q ss_pred HHHHHHHHHhcc---cccccCCCCCceEEecCCCCCHHhHHHHHHHhhccCCCCceecccchhhhhhcC-----------
Q 017851 82 DDMEKIWHHTFY---NELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYAN----------- 147 (365)
Q Consensus 82 ~~~~~~l~~~~~---~~L~~~~~~~~vvl~e~~~~~~~~r~~l~~~lfe~l~~~~v~~~~~~~~a~~~~----------- 147 (365)
+....+|+++.. ..++. .-..++++.|..++...|+.+ +-..+..|++.+.++.+|.+|++++
T Consensus 114 ei~a~iL~~lk~~ae~~lg~--~v~~~VITVPa~f~~~qr~a~-~~Aa~~AGl~v~~li~EP~AAAlaygl~~~~~~~~v 190 (605)
T 4b9q_A 114 QISAEVLKKMKKTAEDYLGE--PVTEAVITVPAYFNDAQRQAT-KDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTI 190 (605)
T ss_dssp HHHHHHHHHHHHHHHHHHTS--CCCEEEEEECTTCCHHHHHHH-HHHHHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEE
T ss_pred HHHHHHHHHHHHHHHHHhCC--CCCeEEEEECCCCCHHHHHHH-HHHHHHcCCceEEEeCcHHHHHHHhhhhccCCCCEE
Confidence 444455555532 23332 335789999999998888754 5556678999999999999988765
Q ss_pred -------CceEEEEeeC------Cee-CCCceEEecCcHHHHHHHHHHHHHhc-----CCCccchhH-----HHHHHHHh
Q 017851 148 -------GVSHTVPIYE------GYA-LPHAILRLDLAGRDLTDALMKILTER-----GYSFTTTAE-----REIVRDMK 203 (365)
Q Consensus 148 -------~~t~v~pV~~------g~~-~~~~~~~~~~gG~~l~~~l~~~l~~~-----~~~~~~~~~-----~~~~~~ik 203 (365)
|.+.++.+.- |.. +........+||.++++.+.+++..+ +.+...... ...++.+|
T Consensus 191 lV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K 270 (605)
T 4b9q_A 191 AVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAK 270 (605)
T ss_dssp EEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHH
T ss_pred EEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHH
Confidence 2333333321 111 11112235789999999998887642 222221100 22344455
Q ss_pred hccceeeccHHHHHHHhccCCCcccEEEcCC--C-c--EEeeCCccc-ccccccCCCccCCCCCCChHHHHHHHHHhCCh
Q 017851 204 EKLAYIALDYEQELETAKTSSAVEKSYELPD--G-Q--VITIGAERF-RCPEVLFQPSMIGMESAGIHETTYNSIMKCDV 277 (365)
Q Consensus 204 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~lpd--~-~--~i~i~~~r~-~~~E~LF~p~~~~~~~~~l~~~I~~~i~~~~~ 277 (365)
..++.... .....++...+ | . .+.++...| ...+.++. .+.+.|.++++....
T Consensus 271 ~~Ls~~~~------------~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~---------~i~~~v~~~L~~a~~ 329 (605)
T 4b9q_A 271 IELSSAQQ------------TDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN---------RSIEPLKVALQDAGL 329 (605)
T ss_dssp HHTTTCSE------------EEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHH---------HTTHHHHHHHHHTTC
T ss_pred HhcCcCCC------------eEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHH---------HHHHHHHHHHHHcCC
Confidence 44332110 00011111111 1 1 122222211 11222222 245556666665432
Q ss_pred hHHHhhhcccccccCccCccChHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhhcc
Q 017851 278 DIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 339 (365)
Q Consensus 278 d~r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 339 (365)
...-.+.|+|+||+|++|++.++|.+.+.. .+..+.+|..++-.||+++|..
T Consensus 330 --~~~~i~~VvLvGG~sriP~v~~~l~~~fg~--------~~~~~~nPdeaVA~GAai~a~~ 381 (605)
T 4b9q_A 330 --SVSDIDDVILVGGQTRMPMVQKKVAEFFGK--------EPRKDVNPDEAVAIGAAVQGGV 381 (605)
T ss_dssp --CGGGCSEEEEESGGGGSHHHHHHHHHHHTS--------CCCSSSCTTTHHHHHHHHHHHH
T ss_pred --CHHHCcEEEEeCCccCchHHHHHHHHHhcc--------CcCCCcChhHHHHHhHHHHHHH
Confidence 223357899999999999999999988732 2344557888999999998854
No 21
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=98.88 E-value=1.9e-08 Score=95.80 Aligned_cols=187 Identities=11% Similarity=0.122 Sum_probs=114.1
Q ss_pred HHhHHHHHHHhhccCCCCceecccchhhhhhcC-----------------CceEEEEeeCCeeCCCceEEecCcHHHHHH
Q 017851 115 KANREKMTQIMFETFNAPAMYVAIQAVLSLYAN-----------------GVSHTVPIYEGYALPHAILRLDLAGRDLTD 177 (365)
Q Consensus 115 ~~~r~~l~~~lfe~l~~~~v~~~~~~~~a~~~~-----------------~~t~v~pV~~g~~~~~~~~~~~~gG~~l~~ 177 (365)
+...+.+.++ ++..|..-..++.+|+++++++ |.|.++.+.+|.+.. ....++||+++++
T Consensus 167 ~~~v~n~~~~-~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~~--~~~i~~GG~~it~ 243 (419)
T 4a2a_A 167 LKVYEMFYNF-LQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIK--ISYVPVGMKHVIK 243 (419)
T ss_dssp HHHHHHHHHH-HHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEEE--EEEESCCHHHHHH
T ss_pred HHHHHHHHHH-HHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEEE--EEecccHHHHHHH
Confidence 3444444444 5667888888999999988765 677888888998763 4678999999999
Q ss_pred HHHHHHHhcCCCccchhHHHHHHHHhhccceeeccHHHHHHHhccCCCcccEEEcCC--C-cEEeeCCc-ccccccccCC
Q 017851 178 ALMKILTERGYSFTTTAEREIVRDMKEKLAYIALDYEQELETAKTSSAVEKSYELPD--G-QVITIGAE-RFRCPEVLFQ 253 (365)
Q Consensus 178 ~l~~~l~~~~~~~~~~~~~~~~~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~lpd--~-~~i~i~~~-r~~~~E~LF~ 253 (365)
.+.+.+.. ..+.+|.+|.+++...... .....+++|. + ....++.. ...+.+..+.
T Consensus 244 dIa~~l~~---------~~~~AE~iK~~~g~a~~~~-----------~~~~~i~v~~~~~~~~~~is~~~l~~ii~p~ve 303 (419)
T 4a2a_A 244 DVSAVLDT---------SFEESERLIITHGNAVYND-----------LKEEEIQYRGLDGNTIKTTTAKKLSVIIHARLR 303 (419)
T ss_dssp HHHHHHTC---------CHHHHHHHHHHHCCSCCTT-----------CCCCEEEEECTTSCSEEEEEHHHHHHHHHHHHH
T ss_pred HHHHHHCC---------CHHHHHHHHHHhccCcccC-----------CCCceEEEeecCCccceEEcHHHHHHHHHHHHH
Confidence 99887631 3577899999876542110 1112233332 1 11222211 1111222222
Q ss_pred CccCCCCCCChHHHHHHHHHhCCh---hH-HHhhhcccccccCccCccChHHHHHHHHHhhCCCCceEEEEC-----C--
Q 017851 254 PSMIGMESAGIHETTYNSIMKCDV---DI-RKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVA-----P-- 322 (365)
Q Consensus 254 p~~~~~~~~~l~~~I~~~i~~~~~---d~-r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~~~~~~~v~v~~-----~-- 322 (365)
.+.+.|.++|+.... +. ...+.+.|+||||+|++||+.+.+++.+.. .+++.. |
T Consensus 304 ---------ei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~------~vri~~~~~~~p~~ 368 (419)
T 4a2a_A 304 ---------EIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKS------PVRTGCYANSDRPS 368 (419)
T ss_dssp ---------HHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTS------CEEECCGGGSSSCC
T ss_pred ---------HHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCC------CeEEEecCCCCchh
Confidence 255666677766542 22 345678899999999999999999998842 455544 2
Q ss_pred --------CCCccceeehhhhhhcc
Q 017851 323 --------PERKYSVWIGGSILASL 339 (365)
Q Consensus 323 --------~~~~~~~w~Gasi~a~l 339 (365)
.+|.|+.-.|-.+++..
T Consensus 369 ~~~~~~~~~~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 369 IINADEVANDPSFAAAFGNVFAVSE 393 (419)
T ss_dssp CBTCHHHHTCGGGHHHHHTTCC---
T ss_pred ccCcccccCCchHHHHHHHHHHHhh
Confidence 35778877777766644
No 22
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=98.61 E-value=9.3e-09 Score=94.88 Aligned_cols=271 Identities=14% Similarity=0.110 Sum_probs=148.8
Q ss_pred CCCcEEEeCCCCcEEEeee--C---CCCCCCCCCcceEeeCCCC-------ccccCCCccccccchhhhccCcceeeccc
Q 017851 6 DIQPLVCDNGTGMVKAGFA--G---DDAPRAVFPSIVGRPRHTG-------VMVGMGQKDAYVGDEAQSKRGILTLKYPI 73 (365)
Q Consensus 6 ~~~~vViD~Gs~~ik~G~a--g---~~~P~~~~ps~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~p~ 73 (365)
+.-.|-||+|-+++|+-.. + +..-+..|||.++...... .....+.+.+++|+.+... -.
T Consensus 6 ~~~iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG~~a~~~--------~~ 77 (329)
T 4apw_A 6 NEYVMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIGEQGVED--------SS 77 (329)
T ss_dssp CEEEEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEESCCSSSC--------SG
T ss_pred CceEEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeCcccccc--------cc
Confidence 3446789999999998653 2 1223456888887544321 1123456778888765311 01
Q ss_pred cCCccCCHHHHHHHHHHhcccccccC-CCCCceEEecCCCCCH--HhHHHHHHHhhcc-------------CCCCceecc
Q 017851 74 EHGIVSNWDDMEKIWHHTFYNELRVA-PEEHPILLTEAPLNPK--ANREKMTQIMFET-------------FNAPAMYVA 137 (365)
Q Consensus 74 ~~g~i~~~~~~~~~l~~~~~~~L~~~-~~~~~vvl~e~~~~~~--~~r~~l~~~lfe~-------------l~~~~v~~~ 137 (365)
.... +-+....++..++.+.+... ..+-.+++..|...-. ..|+.+.+.+-.. +.+..|.+.
T Consensus 78 ~~~k--~~~~~~~L~l~Aia~~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~ 155 (329)
T 4apw_A 78 ETSK--TNLIHKLAAYTAITQVLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIK 155 (329)
T ss_dssp GGCC--CTTHHHHHHHHHHHTTCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEE
T ss_pred cCCc--CchhHHHHHHHHHHHHhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEE
Confidence 1111 22234444445543334322 1223455555544332 2466666666531 224678999
Q ss_pred cchhhhhhcC----------------CceEEEEeeCCeeCCCceEEecCcHHHHHHHHHHHHHh-c-CCCccchhHHHHH
Q 017851 138 IQAVLSLYAN----------------GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE-R-GYSFTTTAEREIV 199 (365)
Q Consensus 138 ~~~~~a~~~~----------------~~t~v~pV~~g~~~~~~~~~~~~gG~~l~~~l~~~l~~-~-~~~~~~~~~~~~~ 199 (365)
|+++.++|.. |.|.++.+.+|.+.......+++||..+++.+.+.+++ + +..+. ...+
T Consensus 156 pe~~ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G~~~~~~~i~~~l~~~~~g~~i~----~~~~ 231 (329)
T 4apw_A 156 AEGSGVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHGVKDLIIRVGDALTDLNNGNLIT----NEQA 231 (329)
T ss_dssp EHHHHHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHTSSSSCSSCSCTT----SBTT
T ss_pred eccHHHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhHHHHHHHHHHHHHHhhccCCCCC----HHHH
Confidence 9999888754 56788888889887766678899999999999888765 2 22211 1223
Q ss_pred HHHhhccceeeccHHHHHHHhccCCCcccEEEcCCCcEEeeCCcccccccccCCCccCCCCCCChHHHHHHHHHh--CCh
Q 017851 200 RDMKEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHETTYNSIMK--CDV 277 (365)
Q Consensus 200 ~~ik~~~~~v~~~~~~~~~~~~~~~~~~~~~~lpd~~~i~i~~~r~~~~E~LF~p~~~~~~~~~l~~~I~~~i~~--~~~ 277 (365)
+++|.. +.... .+....+..+ .+.+.+- .+.+.|.+.+++ +|+
T Consensus 232 e~i~~~-g~~~~----------------------g~~~~~~~~~--~i~~~~~----------e~~~~I~~~i~~~~~~~ 276 (329)
T 4apw_A 232 ESALNN-GYMKK----------------------GGEIDTESST--VIKKVKE----------KFLKDAIKLIEKRGFKL 276 (329)
T ss_dssp TTCSSS-CSSCE----------------------ECTTCCSTTH--HHHHHHH----------HHHHHHHHHHHHHTCCT
T ss_pred HHHHhc-CCccc----------------------CCcchhHHHH--HHHHHHH----------HHHHHHHHHHHHcCCCH
Confidence 333332 11000 0000000000 0000000 123334444443 343
Q ss_pred hHHHhhhcccccccCccCccChHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhhcc
Q 017851 278 DIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 339 (365)
Q Consensus 278 d~r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 339 (365)
+ +...|+||||+|.+ +.+.|++++ + .++...++|.++.-.|+-.++..
T Consensus 277 ~----~~~~IvltGGGA~l--~~~~l~~~~----~----~~v~v~~~P~~a~a~G~~~~~~~ 324 (329)
T 4apw_A 277 D----QLDSLIFIGGTTQK--LKEQISKTY----P----NNSIITNNSQWTTCEGLYKVAVA 324 (329)
T ss_dssp T----SCSEEEEESTTHHH--HHHHHHHHS----T----TCEECCSSGGGHHHHHHHHHHHH
T ss_pred H----HccEEEEECChHHH--HHHHHHHHc----C----CCCEecCCChhhHHHHHHHHHhh
Confidence 3 36889999999998 445555544 2 13445678999999998877654
No 23
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=98.57 E-value=4.2e-08 Score=90.16 Aligned_cols=166 Identities=11% Similarity=0.132 Sum_probs=92.0
Q ss_pred ccCCCCceecccchhhhhhcC-----------------CceEEEEeeCCee-CCCceEEecCcHHHHHHHHHHHHHhcCC
Q 017851 127 ETFNAPAMYVAIQAVLSLYAN-----------------GVSHTVPIYEGYA-LPHAILRLDLAGRDLTDALMKILTERGY 188 (365)
Q Consensus 127 e~l~~~~v~~~~~~~~a~~~~-----------------~~t~v~pV~~g~~-~~~~~~~~~~gG~~l~~~l~~~l~~~~~ 188 (365)
+.+++..+.++++|++|+++. |.|.++.+.+|.+ +..+....++||.++++.+.+.+.+++.
T Consensus 136 ~~~~i~~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~~~ 215 (320)
T 2zgy_A 136 DTFTIKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLGVSLVTSAVKDALSLART 215 (320)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCCTHHHHHHHHHHTTCCSB
T ss_pred cEEEEEEEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCccccHHHHHHHHHHHHHHcCC
Confidence 455678899999999988764 5667777777765 3333466799999999999999875532
Q ss_pred CccchhHHHHHHHH-hhccceeeccHHHHHHHhccCCCcccEEEcCCCcEEeeCCcccccccccCCCccCCCCCCChHHH
Q 017851 189 SFTTTAEREIVRDM-KEKLAYIALDYEQELETAKTSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMESAGIHET 267 (365)
Q Consensus 189 ~~~~~~~~~~~~~i-k~~~~~v~~~~~~~~~~~~~~~~~~~~~~lpd~~~i~i~~~r~~~~E~LF~p~~~~~~~~~l~~~ 267 (365)
.+ ....++++ |.+...+ +... .. ..|.. +. +.....+..+ ..+.+.
T Consensus 216 ~i----~~~~ae~~lk~~~~~~---~~~~--~i----------~~~~~--~~---~~~~~i~~~~---------~~~~~~ 262 (320)
T 2zgy_A 216 KG----SSYLADDIIIHRKDNN---YLKQ--RI----------NDENK--IS---IVTEAMNEAL---------RKLEQR 262 (320)
T ss_dssp GG----GHHHHHHHHHTTTCHH---HHHH--HS----------SSSCT--HH---HHHHHHHHHH---------HHHHHH
T ss_pred CC----CHHHHHHHHHHhhhhh---cccc--ee----------cCchh--hH---HHHHHHHHHH---------HHHHHH
Confidence 22 23456666 5542100 0000 00 00000 00 0000000000 012333
Q ss_pred HHHHHHhCChhHHHhhhcccccccCccCccChHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhhc
Q 017851 268 TYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS 338 (365)
Q Consensus 268 I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 338 (365)
|.+.+++. .-.+.|+||||+|.+ +.+.|. +..+.. .-++..+.+|.++.-.|+.+++.
T Consensus 263 i~~~i~~~------~~~~~vvl~GGga~l--l~~~l~----~~~~~~-~~~~~~~~~P~~a~A~G~~~~~~ 320 (320)
T 2zgy_A 263 VLNTLNEF------SGYTHVMVIGGGAEL--ICDAVK----KHTQIR-DERFFKTNNSQYDLVNGMYLIGN 320 (320)
T ss_dssp HHHHHTTC------CCCCEEEEESTTHHH--HHHHHH----HTSCCC-GGGEECCSCGGGHHHHHHHHHHC
T ss_pred HHHHHHhh------cCCCeEEEECChHHH--HHHHHH----HHhCCC-CCceeeCCCcHHHHHHHHHHhcC
Confidence 44444332 123779999999987 544444 333321 00345567899999999988763
No 24
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=98.37 E-value=3.9e-07 Score=84.79 Aligned_cols=172 Identities=12% Similarity=0.152 Sum_probs=102.6
Q ss_pred cEEEeCCCCcEEEeeeCCCCCCCCCCcceEeeCCCCc---------------cccCCCcc-ccccchhhhccCcceeecc
Q 017851 9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV---------------MVGMGQKD-AYVGDEAQSKRGILTLKYP 72 (365)
Q Consensus 9 ~vViD~Gs~~ik~G~ag~~~P~~~~ps~~~~~~~~~~---------------~~~~~~~~-~~~g~~~~~~~~~~~~~~p 72 (365)
.|=+|+|-+++|+ ..++ . ...|||.++...+... ....+... +++|+.+....... .+.
T Consensus 6 iigiD~G~~~~K~-~~~~-~-~~~fPS~v~~~~~~~~~l~~~~~~~~~~~~v~v~~~~~~~y~vG~~A~~~~~~~--~~~ 80 (355)
T 3js6_A 6 VMALDFGNGFVKG-KIND-E-KFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTNTG--KDT 80 (355)
T ss_dssp EEEEEECSSEEEE-EETT-E-EEEEESEEEECCSSCCSSTTTSCCCCSCEEEEETTCTTCCEEESTTHHHHCSCC--EEC
T ss_pred EEEEEcCCCcEEE-ecCC-e-EEEeceeeeecccCcccccccccCCCCceEEEEecCCeEEEEEchhhhhcCccc--ccc
Confidence 5779999999996 4444 2 4578998875433211 01123456 88998875432111 121
Q ss_pred c-cCCccCCHHHHHHHHHHhcc---cccccCCCCCceEEecCCCCCHHhH-HHHHHHhhcc-----------CCCCceec
Q 017851 73 I-EHGIVSNWDDMEKIWHHTFY---NELRVAPEEHPILLTEAPLNPKANR-EKMTQIMFET-----------FNAPAMYV 136 (365)
Q Consensus 73 ~-~~g~i~~~~~~~~~l~~~~~---~~L~~~~~~~~vvl~e~~~~~~~~r-~~l~~~lfe~-----------l~~~~v~~ 136 (365)
+ ......+-+ ...++...+. +.+..+..+-.+++..|.-.-...| +.+.+.+-.. +.+..|.+
T Consensus 81 ~~~~~k~~~~~-~~iL~l~Ala~~~~~~~~~~~~~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v 159 (355)
T 3js6_A 81 ASTNDRYDIKS-FKDLVECSIGLLAREVPEEVVNVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKI 159 (355)
T ss_dssp CCSTTGGGSHH-HHHHHHHHHHHHHTTSCSSEEEEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEE
T ss_pred cccCCcccCHH-HHHHHHHHHHHHHHhccCCCceEEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEE
Confidence 2 223332222 2222222221 1111011123577777766555555 4677766532 22378999
Q ss_pred ccchhhhhhcC-----------------------CceEEEEeeCCeeCCCceEEecCcHHHHHHHHHHHHHhc
Q 017851 137 AIQAVLSLYAN-----------------------GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTER 186 (365)
Q Consensus 137 ~~~~~~a~~~~-----------------------~~t~v~pV~~g~~~~~~~~~~~~gG~~l~~~l~~~l~~~ 186 (365)
+|+|++|+++. |.|.++.+.+|.+.......+++||..+++.+.+.++++
T Consensus 160 ~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~ 232 (355)
T 3js6_A 160 VAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTYQNMKRVEEESFVINKGTIDFYKRIASHVSKK 232 (355)
T ss_dssp EEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHHTC--
T ss_pred EeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEEcCCEEccccccCcchHHHHHHHHHHHHHHHh
Confidence 99999998862 456677777888887777889999999999999998865
No 25
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=96.50 E-value=0.0012 Score=63.24 Aligned_cols=62 Identities=16% Similarity=0.165 Sum_probs=47.1
Q ss_pred cchhhhhhcC-----------------CceEEEEeeCCeeCCCceEEecCcHHHHHHHHHHHHHhcCCCccchhHHHHHH
Q 017851 138 IQAVLSLYAN-----------------GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVR 200 (365)
Q Consensus 138 ~~~~~a~~~~-----------------~~t~v~pV~~g~~~~~~~~~~~~gG~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 200 (365)
-++++|.+++ |.|++.-+.+|..+ ....++.||.+++..+..-|.- .+...+|
T Consensus 390 ~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv--~a~~ip~gG~~VT~DIA~~Lgt--------~d~~~AE 459 (610)
T 2d0o_A 390 AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDI--IATHLAGAGDMVTMIIARELGL--------EDRYLAE 459 (610)
T ss_dssp EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCE--EEEEEECSHHHHHHHHHHHHTC--------CCHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE--EEEEeccchHHHHHHHHHHhCC--------CCHHHHH
Confidence 5677777765 67787777777666 4477899999999999988842 2368899
Q ss_pred HHhhccceee
Q 017851 201 DMKEKLAYIA 210 (365)
Q Consensus 201 ~ik~~~~~v~ 210 (365)
+||. ++...
T Consensus 460 rIK~-YG~A~ 468 (610)
T 2d0o_A 460 EIKK-YPLAK 468 (610)
T ss_dssp HHHH-SCEEE
T ss_pred Hhcc-cCcee
Confidence 9999 76653
No 26
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=96.43 E-value=0.0028 Score=60.91 Aligned_cols=62 Identities=11% Similarity=0.160 Sum_probs=46.8
Q ss_pred cchhhhhhcC-----------------CceEEEEeeCCeeCCCceEEecCcHHHHHHHHHHHHHhcCCCccchhHHHHHH
Q 017851 138 IQAVLSLYAN-----------------GVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVR 200 (365)
Q Consensus 138 ~~~~~a~~~~-----------------~~t~v~pV~~g~~~~~~~~~~~~gG~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 200 (365)
-+|++|.+++ |.|++.-+.+|..+ +...++.||.+++..+..-|.- .+...+|
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv--~a~~ip~gG~~VT~DIA~~Lg~--------~d~~~AE 461 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQI--TAVHLAGAGNMVSLLIKTELGL--------EDLSLAE 461 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCE--EEEEEECCHHHHHHHHHHHHTC--------SCHHHHH
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE--EEEEeccchHHHHHHHHHHhCC--------CCHHHHH
Confidence 5677777765 67777777777665 4477899999999999988842 2368899
Q ss_pred HHhhccceee
Q 017851 201 DMKEKLAYIA 210 (365)
Q Consensus 201 ~ik~~~~~v~ 210 (365)
+||. ++...
T Consensus 462 rIK~-YG~A~ 470 (607)
T 1nbw_A 462 AIKK-YPLAK 470 (607)
T ss_dssp HHHH-SCEEE
T ss_pred Hhcc-cCcee
Confidence 9999 76553
No 27
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=95.77 E-value=0.0032 Score=55.95 Aligned_cols=51 Identities=25% Similarity=0.448 Sum_probs=41.7
Q ss_pred HHhhhcccccccCccCccChHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhhc
Q 017851 280 RKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS 338 (365)
Q Consensus 280 r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 338 (365)
+....++|+++||.|..|+++++|++.+. .++..|++|.+..-+||+++|.
T Consensus 203 ~~~~~~~vvl~GGva~n~~lr~~l~~~~g--------~~~~~p~~p~~~~A~GAAl~A~ 253 (276)
T 4ehu_A 203 RIGVQRNVVMVGGVARNSGIVRAMAREIN--------TEIIVPDIPQLTGALGAALYAF 253 (276)
T ss_dssp HHCCCSSEEEESGGGGCHHHHHHHHHHHT--------SCEECCSSGGGHHHHHHHHHHH
T ss_pred hcccCCeEEEecCccchHHHHHHHHHHHC--------CCeeeCCCcchHHHHHHHHHHH
Confidence 34456789999999999999999987762 3567778889988899999883
No 28
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=90.06 E-value=0.13 Score=45.67 Aligned_cols=49 Identities=18% Similarity=0.018 Sum_probs=40.4
Q ss_pred hcccccccC-ccCccChHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhh
Q 017851 284 YGNIVLSGG-STMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILA 337 (365)
Q Consensus 284 ~~nIvl~GG-~s~i~g~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a 337 (365)
.++|+++|| .+..|++.++|.+.+... ..++..++++++..-+||++++
T Consensus 237 i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~-----~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 237 TENIVYIGSSFHNNALLRKVVEDYTVLR-----GCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp CCEEEEESGGGTTCHHHHHHHHHHHHHT-----TCEEEECTTGGGHHHHHHHHTC
T ss_pred CCeEEEeCCchhcCHHHHHHHHHHHhhC-----CceEEECCCccHHHHHHHHHhC
Confidence 457999999 999999999999776442 3467778889999999999875
No 29
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=84.25 E-value=0.22 Score=43.88 Aligned_cols=48 Identities=17% Similarity=0.383 Sum_probs=38.8
Q ss_pred hcccccccCccCccChHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhhcc
Q 017851 284 YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 339 (365)
Q Consensus 284 ~~nIvl~GG~s~i~g~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 339 (365)
-+.|+++||.++.+++.+.+.+.|.. +|..++.+.+..-+||+++|..
T Consensus 209 ~~~i~~~GG~a~n~~~~~~~~~~lg~--------~v~~p~~~~~~~AlGAAl~A~~ 256 (270)
T 1hux_A 209 VKDVVMTGGVAQNYGVRGALEEGLGV--------EIKTSPLAQYNGALGAALYAYK 256 (270)
T ss_dssp CSSEEEESGGGGCHHHHHHHHHHHCS--------CEECCGGGGGHHHHHHHHHHHH
T ss_pred CCeEEEeCccccCHHHHHHHHHHHCC--------CeEeCCCcchHhHHHHHHHHHH
Confidence 36799999999999999999888832 4566767787788899998854
No 30
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=76.75 E-value=1.2 Score=40.81 Aligned_cols=56 Identities=9% Similarity=0.070 Sum_probs=40.8
Q ss_pred HHhhhcccccccC-ccCccChHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhh
Q 017851 280 RKDLYGNIVLSGG-STMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILA 337 (365)
Q Consensus 280 r~~l~~nIvl~GG-~s~i~g~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a 337 (365)
++.=.++|+++|| .++.|++.+.|.+.|.---.. .+++.-++++++..-+||.+.+
T Consensus 302 ~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g--~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 302 LNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKG--QLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp HHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTT--SCCEEEETTTTCHHHHHHHHHH
T ss_pred HHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcC--CeeEEEcCCccHHHHHHHHHHh
Confidence 3444568999999 999999999999988532211 2345446667899899998764
No 31
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=67.02 E-value=3.5 Score=36.46 Aligned_cols=66 Identities=17% Similarity=0.239 Sum_probs=44.2
Q ss_pred hHHHHHHHHHhCChhHHHhhhcccccccCccCccChHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhhc
Q 017851 264 IHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS 338 (365)
Q Consensus 264 l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 338 (365)
|...+.+.+.-++++ .|+|.||.+..+.|.+++++.+...... .++|..+.....+.-+||+.++.
T Consensus 225 La~~i~~l~~~~~p~-------~IvlgGgi~~~~~~~~~l~~~l~~~~~~--~~~i~~s~lg~~a~~~GAa~l~~ 290 (297)
T 4htl_A 225 ICTGLYNLIYLFDPT-------HIFIGGGITSRPTFIAELKHHMESFGLR--DTIIETATHKNQAGLLGAVYHFL 290 (297)
T ss_dssp HHHHHHHHHHHHCCS-------EEEEESGGGGSTTHHHHHHHHHTTTCCT--TCEEEECSCTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC-------EEEEeCcccccHHHHHHHHHHHHHhccC--CCeEEECCcCChHHHHhHHHHHH
Confidence 444455555555543 3899999998888999999999866543 34454444445678889887663
No 32
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=63.50 E-value=2.6 Score=37.01 Aligned_cols=51 Identities=16% Similarity=0.289 Sum_probs=35.2
Q ss_pred ccccccCccCccChHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhh
Q 017851 286 NIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILA 337 (365)
Q Consensus 286 nIvl~GG~s~i~g~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a 337 (365)
.|+|.||.+..+-|.+++++.+.+.... ..+++..+.....+..+||+.++
T Consensus 236 ~ivlgG~~~~~~~~~~~l~~~l~~~~~~-~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 236 CVVVGGSVGLAEGYLALVETYLAQEPAA-FHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp EEEEEHHHHTSTTHHHHHHHHHTTSCGG-GCCEEEECSCSSCHHHHHHHHHH
T ss_pred EEEEeCcccccHHHHHHHHHHHHHhcCc-cCCEEEECCCCCchHHHHHHHHH
Confidence 4888888886788999999888875322 24455544444566778888765
No 33
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=62.37 E-value=4.8 Score=36.11 Aligned_cols=67 Identities=19% Similarity=0.176 Sum_probs=43.5
Q ss_pred hHHHHHHHHHhCChhHHHhhhcccccccCccCccChHHHHHHHHHhhCCC-CceEEEECCCCCccceeehhhhhh
Q 017851 264 IHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPS-SMKIKVVAPPERKYSVWIGGSILA 337 (365)
Q Consensus 264 l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~~~~-~~~v~v~~~~~~~~~~w~Gasi~a 337 (365)
|...+.+.+..++++ .|+|.||.+..+-|.+++++.+.+.... ..+++|..+.....+.-+||+.++
T Consensus 257 La~~i~~l~~~l~p~-------~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 257 LAICFGNIFTANDPH-------VVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp HHHHHHHHHHHHCCS-------EEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCC-------EEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 344444444444443 3888888888877888888888876532 234566555545667778888765
No 34
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=60.67 E-value=2.1 Score=37.72 Aligned_cols=67 Identities=13% Similarity=0.085 Sum_probs=40.2
Q ss_pred hHHHHHHHHHhCChhHHHhhhcccccccCccCccChHHHHHHHHHhhCCCC----ceEEEECCCCCccceeehhhhhh
Q 017851 264 IHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSS----MKIKVVAPPERKYSVWIGGSILA 337 (365)
Q Consensus 264 l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~~~~~----~~v~v~~~~~~~~~~w~Gasi~a 337 (365)
|...+...+..++++ .|+|.||.+..+-|.+++++.+.+..+.. .++++..+.....+..+||+.++
T Consensus 215 L~~~i~~l~~~l~p~-------~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~ 285 (292)
T 2gup_A 215 LAQGLLNIQYLIDPG-------VISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNW 285 (292)
T ss_dssp HHHHHHHHHHHHCCS-------EEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC-------EEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHH
Confidence 344444445544443 48888888776778888888877653211 22444444333456778888765
No 35
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=57.40 E-value=6.3 Score=36.16 Aligned_cols=67 Identities=12% Similarity=0.122 Sum_probs=41.4
Q ss_pred hHHHHHHHHHhCChhHHHhhhcccccccCccCc-cChHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhh
Q 017851 264 IHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMF-PGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILA 337 (365)
Q Consensus 264 l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i-~g~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a 337 (365)
|...+...+..++++ .|+|.||.+.. +-|.+++++.+.+.......++|........+...||+.++
T Consensus 302 La~~i~~l~~~ldP~-------~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~ 369 (380)
T 2hoe_A 302 FSIGLLNLIHLFGIS-------KIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHA 369 (380)
T ss_dssp HHHHHHHHHHHHCCC-------EEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC-------EEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHH
Confidence 344444444444443 48888888764 66888888888876543234555544333456778888765
No 36
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=56.16 E-value=4.6 Score=35.76 Aligned_cols=67 Identities=12% Similarity=0.061 Sum_probs=42.1
Q ss_pred hHHHHHHHHHhCChhHHHhhhcccccccCcc-Cc-cChHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhh
Q 017851 264 IHETTYNSIMKCDVDIRKDLYGNIVLSGGST-MF-PGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILA 337 (365)
Q Consensus 264 l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s-~i-~g~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a 337 (365)
|...+.+.+..++++ .|+|.||.+ .. +-|.+++++.+.+.........+..+.....+.-+||+.++
T Consensus 225 l~~~i~~l~~~~~p~-------~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 293 (302)
T 3vov_A 225 VGIGLASLVKAFDPG-------VVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTA 293 (302)
T ss_dssp HHHHHHHHHHHHCCS-------EEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCC-------EEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHH
Confidence 444444555544443 388888877 55 45889999999887643333335444444567778888776
No 37
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=54.19 E-value=4.5 Score=36.14 Aligned_cols=67 Identities=19% Similarity=0.214 Sum_probs=42.7
Q ss_pred hHHHHHHHHHhCChhHHHhhhcccccccCccCc-cChHHHHHHHHHhhCCCC--ceEEEECCCCCccceeehhhhhh
Q 017851 264 IHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMF-PGIADRMSKEISALAPSS--MKIKVVAPPERKYSVWIGGSILA 337 (365)
Q Consensus 264 l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i-~g~~~RL~~el~~~~~~~--~~v~v~~~~~~~~~~w~Gasi~a 337 (365)
|...|.+.+..++++ .|+|.||.+.. +-|.+++++.+.+..... .++++..+.....+..+||+.++
T Consensus 248 La~~i~~l~~~ldP~-------~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~ 317 (321)
T 3r8e_A 248 IGESLVNIVRVMDLN-------NILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLI 317 (321)
T ss_dssp HHHHHHHHHHHHCCC-------EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCC-------EEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHH
Confidence 344444444444443 38888888865 567888888888765421 23566655555667788988765
No 38
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=53.68 E-value=4.3 Score=36.19 Aligned_cols=52 Identities=19% Similarity=0.193 Sum_probs=34.6
Q ss_pred ccccccCccC-ccChHHHHHHHHHhhCCCC--ceEEEECCCCCccceeehhhhhh
Q 017851 286 NIVLSGGSTM-FPGIADRMSKEISALAPSS--MKIKVVAPPERKYSVWIGGSILA 337 (365)
Q Consensus 286 nIvl~GG~s~-i~g~~~RL~~el~~~~~~~--~~v~v~~~~~~~~~~w~Gasi~a 337 (365)
.|+|.||.+. .+-|.+++++.+.+..... ..+++..+.....+..+||+.++
T Consensus 265 ~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 319 (326)
T 2qm1_A 265 SVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLA 319 (326)
T ss_dssp EEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHG
T ss_pred EEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHH
Confidence 4888888875 5678888888888765321 13455544444556778988776
No 39
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=51.82 E-value=8 Score=34.27 Aligned_cols=67 Identities=19% Similarity=0.212 Sum_probs=44.6
Q ss_pred hHHHHHHHHHhCChhHHHhhhcccccccCccCccChHHHHHHHHHhhCCCC---------ceEEEECCCCCccceeehhh
Q 017851 264 IHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAPSS---------MKIKVVAPPERKYSVWIGGS 334 (365)
Q Consensus 264 l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~~~~~---------~~v~v~~~~~~~~~~w~Gas 334 (365)
|...|.+.+.-+++|. |+|-||.+..+.|-+++++.+.+..... .++.+..+.....+..+||+
T Consensus 212 La~~i~nl~~~ldPe~-------IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa 284 (302)
T 3epq_A 212 IAQALAQYILILAPXX-------IILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTL 284 (302)
T ss_dssp HHHHHHHHHHHTCCSC-------EEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHH
T ss_pred HHHHHHHHHHHHCchh-------hhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHH
Confidence 5556666666666654 8888888877668888888887754211 12345555555667788988
Q ss_pred hhh
Q 017851 335 ILA 337 (365)
Q Consensus 335 i~a 337 (365)
.++
T Consensus 285 ~l~ 287 (302)
T 3epq_A 285 VLA 287 (302)
T ss_dssp HHH
T ss_pred HHH
Confidence 776
No 40
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=49.28 E-value=9.5 Score=33.98 Aligned_cols=68 Identities=15% Similarity=0.087 Sum_probs=42.3
Q ss_pred hHHHHHHHHHhCChhHHHhhhcccccccCccCc-cChHHHHHHHHHhhCC-C--CceEEEECCCCCccceeehhhhhhc
Q 017851 264 IHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMF-PGIADRMSKEISALAP-S--SMKIKVVAPPERKYSVWIGGSILAS 338 (365)
Q Consensus 264 l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i-~g~~~RL~~el~~~~~-~--~~~v~v~~~~~~~~~~w~Gasi~a~ 338 (365)
|...|.+.+..++++ .|+|.||.+.. +-|.+++++.+.+... . ...++|..+.....+.-+||+.++.
T Consensus 240 La~~i~~l~~~l~p~-------~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l~~ 311 (321)
T 3vgl_A 240 AGAGLADLASLFDPS-------AFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLAR 311 (321)
T ss_dssp HHHHHHHHHHHHCCS-------EEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC-------EEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHHHH
Confidence 344444444444443 38888888775 3467888888887664 1 1245666555456777888876653
No 41
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=45.72 E-value=14 Score=32.85 Aligned_cols=58 Identities=17% Similarity=0.291 Sum_probs=37.4
Q ss_pred cccccCccCccC-hHHHHHHHHHhhCCC---CceEEEECCCCCccceeehhhhhhccccccc
Q 017851 287 IVLSGGSTMFPG-IADRMSKEISALAPS---SMKIKVVAPPERKYSVWIGGSILASLSTFQQ 344 (365)
Q Consensus 287 Ivl~GG~s~i~g-~~~RL~~el~~~~~~---~~~v~v~~~~~~~~~~w~Gasi~a~l~~~~~ 344 (365)
|+|-||.+..+. +.++|.+.+++.... ..++++..+.....+.-+||+.++--..|.+
T Consensus 243 IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~~~~~~ 304 (310)
T 3htv_A 243 VILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQRFLPQ 304 (310)
T ss_dssp EEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHHHHCC-
T ss_pred EEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHHHhhcc
Confidence 888888887654 577888887765521 1245666555456778899988774444443
No 42
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=45.27 E-value=7.7 Score=35.46 Aligned_cols=23 Identities=13% Similarity=0.432 Sum_probs=20.6
Q ss_pred cccccccCccCccChHHHHHHHH
Q 017851 285 GNIVLSGGSTMFPGIADRMSKEI 307 (365)
Q Consensus 285 ~nIvl~GG~s~i~g~~~RL~~el 307 (365)
+.|++|||++.-|-+.+||++.|
T Consensus 285 ~~v~vcGGGa~N~~Lm~~L~~~l 307 (371)
T 3qbx_A 285 EEVLVCGGGAFNTALMKRLAMLM 307 (371)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHC
T ss_pred ceEEEECCccCcHHHHHHHHHhC
Confidence 56999999999999999998776
No 43
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=41.08 E-value=13 Score=33.29 Aligned_cols=71 Identities=11% Similarity=0.090 Sum_probs=39.3
Q ss_pred hHHHHHHHHHhCChhHHHh-hhcccccccCccC-ccChHHHHHHHHHhhC--CC---CceEEEECCCCCccceeehhhhh
Q 017851 264 IHETTYNSIMKCDVDIRKD-LYGNIVLSGGSTM-FPGIADRMSKEISALA--PS---SMKIKVVAPPERKYSVWIGGSIL 336 (365)
Q Consensus 264 l~~~I~~~i~~~~~d~r~~-l~~nIvl~GG~s~-i~g~~~RL~~el~~~~--~~---~~~v~v~~~~~~~~~~w~Gasi~ 336 (365)
|...|...+..++++.... ---.|+|.||.+. .+-|.+++++.+.+.. +. ..++.+... .. ++.+||..+
T Consensus 245 La~~i~~l~~~~~p~~~~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~--~~-a~~~GAa~l 321 (347)
T 2ch5_A 245 LGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKL--RH-SSALGGASL 321 (347)
T ss_dssp HHHHHHHHGGGSCGGGGCSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEE--SS-CTHHHHHHH
T ss_pred HHHHHHHHHHHhcccccccCCCceEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEec--CC-ChHHHHHHH
Confidence 4445555555555541000 0014888888764 3667788888887764 22 223433333 24 677898877
Q ss_pred h
Q 017851 337 A 337 (365)
Q Consensus 337 a 337 (365)
+
T Consensus 322 a 322 (347)
T 2ch5_A 322 G 322 (347)
T ss_dssp H
T ss_pred H
Confidence 6
No 44
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=39.23 E-value=7.2 Score=34.82 Aligned_cols=52 Identities=13% Similarity=0.227 Sum_probs=30.0
Q ss_pred ccccccCccCccChHHHHHHHHHhhCC-CCceEEEECCCCCccceeehhhhhh
Q 017851 286 NIVLSGGSTMFPGIADRMSKEISALAP-SSMKIKVVAPPERKYSVWIGGSILA 337 (365)
Q Consensus 286 nIvl~GG~s~i~g~~~RL~~el~~~~~-~~~~v~v~~~~~~~~~~w~Gasi~a 337 (365)
.|+|.||.+....+-.++++.+++... ....++|..+.....+..+||+.++
T Consensus 272 ~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~a~~~GAa~la 324 (327)
T 2ap1_A 272 LLVIGGGLSNFTAITTQLAERLPRHLLPVARAPRIERARHGDAGGMRGAAFLH 324 (327)
T ss_dssp EEEEESGGGGSTHHHHSSGGGSGGGSCTTCCCCEEEECSCTTTHHHHHHHHTT
T ss_pred EEEEeChhhcchhHHHHHHHHHHHhhccccCCCEEEEcCCCCcHHHHHHHHHH
Confidence 388888887654444445555555433 1124555544434556778888765
No 45
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=38.21 E-value=12 Score=34.26 Aligned_cols=23 Identities=17% Similarity=0.518 Sum_probs=20.4
Q ss_pred cccccccCccCccChHHHHHHHH
Q 017851 285 GNIVLSGGSTMFPGIADRMSKEI 307 (365)
Q Consensus 285 ~nIvl~GG~s~i~g~~~RL~~el 307 (365)
..|++|||++.-|-+.+||++.|
T Consensus 291 ~~v~vcGGGa~N~~Lm~~L~~~l 313 (370)
T 3cqy_A 291 GELFVCGGGAFNAELMQRLAALL 313 (370)
T ss_dssp EEEEEESGGGGCHHHHHHHHHHC
T ss_pred CEEEEECCCcCCHHHHHHHHHhC
Confidence 36999999999999999998766
No 46
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=37.53 E-value=17 Score=33.28 Aligned_cols=51 Identities=18% Similarity=0.193 Sum_probs=35.2
Q ss_pred cccccccCccCccC-hHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhhcc
Q 017851 285 GNIVLSGGSTMFPG-IADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 339 (365)
Q Consensus 285 ~nIvl~GG~s~i~g-~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 339 (365)
+-|+|+||.+...- |.+++.+.+.... .+.|........+.-.||..++.-
T Consensus 297 ~~IvlgGgi~~~~~~l~~~i~~~l~~~~----~~~i~~~~~~~~a~~~GAa~l~~~ 348 (381)
T 1saz_A 297 DFIVLTGGLAHEKEFLVPWITKRVSFIA----PVLVFPGSNEEKALALSALRVLRG 348 (381)
T ss_dssp SEEEEEEGGGGCTTTHHHHHHHHHTTTS----CEEEEEBCCHHHHHHHHHHHHHTT
T ss_pred CEEEEeCcCccChHHHHHHHHHHHHhhc----CeEEEecCcchhHHHHHHHHHHcC
Confidence 34999999887655 8899998887754 355554443344677888777643
No 47
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=36.52 E-value=18 Score=34.23 Aligned_cols=51 Identities=12% Similarity=0.189 Sum_probs=39.9
Q ss_pred ccccccCccCccChHHHHHHHHHhhCCC------CceEEEECCCCCccceeehhhhhhcc
Q 017851 286 NIVLSGGSTMFPGIADRMSKEISALAPS------SMKIKVVAPPERKYSVWIGGSILASL 339 (365)
Q Consensus 286 nIvl~GG~s~i~g~~~RL~~el~~~~~~------~~~v~v~~~~~~~~~~w~Gasi~a~l 339 (365)
.|.+-||....|+|.+++++.++++++. ..+|.+.... -++=+||+++|.+
T Consensus 386 ~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~---dgsg~GAAl~aa~ 442 (457)
T 2yhx_A 386 HIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAI---DGXGAASXVIXSI 442 (457)
T ss_dssp EEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECC---CTTTHHHHHHHHH
T ss_pred EEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEECC---CchhhhHHHHHHH
Confidence 4778888877899999999999998753 3467776664 4578899998866
No 48
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=35.56 E-value=25 Score=33.13 Aligned_cols=50 Identities=16% Similarity=0.297 Sum_probs=36.9
Q ss_pred cccccCcc-CccChHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhhcc
Q 017851 287 IVLSGGST-MFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 339 (365)
Q Consensus 287 Ivl~GG~s-~i~g~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 339 (365)
|.+.||.. .-|.|.+++++.+++++....+|.+... ..++.+||+++|..
T Consensus 396 V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l~---~dgs~iGAAllA~~ 446 (451)
T 1bdg_A 396 VGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRLS---EDGSGKGAAAIAAS 446 (451)
T ss_dssp EEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEEC---TTHHHHHHHHHHTT
T ss_pred EEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEEC---CCccHHHHHHHHHH
Confidence 44556653 5789999999999988644556666644 56789999998865
No 49
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=33.47 E-value=12 Score=32.70 Aligned_cols=45 Identities=24% Similarity=0.086 Sum_probs=28.6
Q ss_pred ccccccCccCccChHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhhc
Q 017851 286 NIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILAS 338 (365)
Q Consensus 286 nIvl~GG~s~i~g~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~ 338 (365)
.|+|.||.+..+-|.++|++.+.+. ++.... ...++-.||..++.
T Consensus 242 ~IvlgGgv~~~~~~~~~l~~~~~~~-----~i~~~~---~~~~~~~GAa~la~ 286 (299)
T 2e2o_A 242 KVYLKGGMFRSNIYHKFFTLYLEKE-----GIISDL---GKRSPEIGAVILAY 286 (299)
T ss_dssp EEEEESGGGGSHHHHHHHHHHHHHT-----TCEEEC---CSCCHHHHHHHHHH
T ss_pred EEEEECCccCcHHHHHHHHHHCCCC-----eEeccC---CCCChHHHHHHHHH
Confidence 3888888776566777777776653 233322 24557788887763
No 50
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=32.55 E-value=24 Score=31.73 Aligned_cols=27 Identities=15% Similarity=0.299 Sum_probs=23.7
Q ss_pred hcccccccCccCccChHHHHHHHHHhh
Q 017851 284 YGNIVLSGGSTMFPGIADRMSKEISAL 310 (365)
Q Consensus 284 ~~nIvl~GG~s~i~g~~~RL~~el~~~ 310 (365)
.++|+++||.+.-..+.++|.+++...
T Consensus 250 ~~~vvlsGGVa~N~~L~~~L~~~l~~~ 276 (334)
T 3eno_A 250 KDEILMAGGVALNRRLRDMVTNMAREA 276 (334)
T ss_dssp CSEEEEESSGGGCHHHHHHHHHHHHHH
T ss_pred CCeEEEcCCHHHHHHHHHHHHHHHHHc
Confidence 468999999999999999999988653
No 51
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=31.85 E-value=13 Score=33.91 Aligned_cols=18 Identities=28% Similarity=0.412 Sum_probs=15.3
Q ss_pred CcEEEeCCCCcEEEeeeC
Q 017851 8 QPLVCDNGTGMVKAGFAG 25 (365)
Q Consensus 8 ~~vViD~Gs~~ik~G~ag 25 (365)
-.+.+|+|...+|+++..
T Consensus 30 ~~lgiDiGgt~i~~~l~d 47 (373)
T 2q2r_A 30 LTFVGDVGGTSARMGFVR 47 (373)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred eEEEEEEccccEEEEEEe
Confidence 358899999999999864
No 52
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=31.65 E-value=26 Score=31.37 Aligned_cols=35 Identities=23% Similarity=0.343 Sum_probs=27.5
Q ss_pred hcccccccCccCccChHHHHHHHHHhhCCCCceEEEECCC
Q 017851 284 YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPP 323 (365)
Q Consensus 284 ~~nIvl~GG~s~i~g~~~RL~~el~~~~~~~~~v~v~~~~ 323 (365)
.++|+++||.+.-..+.++|.+.+... .++++.++
T Consensus 245 ~~~vvlsGGVa~N~~l~~~l~~~l~~~-----g~~v~~p~ 279 (330)
T 2ivn_A 245 KDEVVLVGGVAANNRLREMLRIMTEDR-----GIKFFVPP 279 (330)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHH-----TCEEECCC
T ss_pred CCeEEEEccHHHHHHHHHHHHHHHHHc-----CCEEEecC
Confidence 468999999999999999999988653 23565554
No 53
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=27.99 E-value=30 Score=30.88 Aligned_cols=64 Identities=16% Similarity=0.146 Sum_probs=35.0
Q ss_pred hHHHHHHHHHhCChhHHHhhhcccccccCccCccChHHHHHHHHHhhCC-CCceEEEECCCCCccceeehhhhhh
Q 017851 264 IHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEISALAP-SSMKIKVVAPPERKYSVWIGGSILA 337 (365)
Q Consensus 264 l~~~I~~~i~~~~~d~r~~l~~nIvl~GG~s~i~g~~~RL~~el~~~~~-~~~~v~v~~~~~~~~~~w~Gasi~a 337 (365)
|..++.+.+..++++ .|+|.||.+ +-|.+.|++.+++... ....+++..+.... .+.+||+.++
T Consensus 272 La~~i~~l~~~l~P~-------~IvlgG~i~--~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~-~~~~GAa~l~ 336 (343)
T 2yhw_A 272 LGLGVVNILHTMNPS-------LVILSGVLA--SHYIHIVKDVIRQQALSSVQDVDVVVSDLVD-PALLGAASMV 336 (343)
T ss_dssp HHHHHHHHHHHTCCS-------EEEEESTTH--HHHHHHHHHHHHHHSCGGGTTCEEEECCCSC-HHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC-------EEEEeCCcH--HHHHHHHHHHHHHhcccccCCcEEEEccCCC-chHHHHHHHH
Confidence 334444444444443 488888775 5677778777776542 11233443332222 4568887765
No 54
>3d7j_A Uncharacterized protein SCO6650; T-fold, unknown function; 1.45A {Streptomyces coelicolor}
Probab=27.58 E-value=23 Score=27.86 Aligned_cols=50 Identities=14% Similarity=0.139 Sum_probs=30.6
Q ss_pred cCCccCCHHHHHHHHHHhcccccccCCCCCceEEecCCCC-CHHhHHHHHHHhhccC
Q 017851 74 EHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLN-PKANREKMTQIMFETF 129 (365)
Q Consensus 74 ~~g~i~~~~~~~~~l~~~~~~~L~~~~~~~~vvl~e~~~~-~~~~r~~l~~~lfe~l 129 (365)
+.|++.|+..++++++.+. +.| |+..+.-.|.+. ....-|.+++++++.+
T Consensus 65 ~~GmVvDF~~lK~~ik~i~-~~l-----DH~~Ln~~p~f~~~npTaEnlA~~i~~~L 115 (152)
T 3d7j_A 65 EDNIVVDIGLATQELGAVV-GAL-----NYRNLDNEPDFAGVNTSTEFLAKVIADRL 115 (152)
T ss_dssp TTSSSSCHHHHHHHHHHHH-HTT-----TTEEGGGCGGGTTSCCCHHHHHHHHHHHH
T ss_pred CCCEEEEHHHHHHHHHHHH-Hhc-----CCcccccccccCCCCCCHHHHHHHHHHHH
Confidence 5799999999999998875 333 222211112221 1223477888888866
No 55
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=26.37 E-value=21 Score=36.94 Aligned_cols=51 Identities=14% Similarity=0.300 Sum_probs=39.2
Q ss_pred cccccccCccCc-cChHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhhcc
Q 017851 285 GNIVLSGGSTMF-PGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 339 (365)
Q Consensus 285 ~nIvl~GG~s~i-~g~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 339 (365)
..|++-||.+.. |.|.+++++.++++.+. .++++... .-++-+||+++|..
T Consensus 408 ~~IvigGgV~~~~~~~~~~l~~~l~~~~~~-~~~~i~~a---~dgs~~GAA~laa~ 459 (917)
T 1cza_N 408 TTVGVDGSLYKTHPQYSRRFHKTLRRLVPD-SDVRFLLS---ESGSGKGAAMVTAV 459 (917)
T ss_dssp EEEEEECHHHHHCSSHHHHHHHHHHHHCTT-EEEEEEEC---TTCHHHHHHHHHHH
T ss_pred eEEEECCchhhccHHHHHHHHHHHHHhcCC-CceEEEEe---ccchHHHHHHHHHh
Confidence 357777777665 99999999999998754 46777665 45688899888865
No 56
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=23.98 E-value=33 Score=31.52 Aligned_cols=52 Identities=13% Similarity=0.118 Sum_probs=31.1
Q ss_pred ccccccCccCc-cChHHHHHHHHHhhCCCC--ceEEEECCCCCccceeehhhhhh
Q 017851 286 NIVLSGGSTMF-PGIADRMSKEISALAPSS--MKIKVVAPPERKYSVWIGGSILA 337 (365)
Q Consensus 286 nIvl~GG~s~i-~g~~~RL~~el~~~~~~~--~~v~v~~~~~~~~~~w~Gasi~a 337 (365)
.|+|.||.+.. +-|.+++++.+.+..... ..+.|........+..+||+++.
T Consensus 337 ~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~ 391 (406)
T 1z6r_A 337 KILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVK 391 (406)
T ss_dssp EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHH
T ss_pred EEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHH
Confidence 48888887653 557778887777653210 13455444333456778886553
No 57
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=23.51 E-value=34 Score=31.72 Aligned_cols=25 Identities=28% Similarity=0.243 Sum_probs=18.1
Q ss_pred CCCCCCCCcEEEeCCCCcEEEeeeC
Q 017851 1 MADTEDIQPLVCDNGTGMVKAGFAG 25 (365)
Q Consensus 1 ~~~~~~~~~vViD~Gs~~ik~G~ag 25 (365)
|++...+..+||..||.++|+++-.
T Consensus 12 ~~~~~~~~ILviN~GSSS~K~~lf~ 36 (415)
T 2e1z_A 12 MASNEFPVVLVINCGSSSIKFSVLD 36 (415)
T ss_dssp -----CCEEEEEEECSSEEEEEEEE
T ss_pred cccCCCCeEEEEECCchhheEEEEE
Confidence 7888888999999999999999653
No 58
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=21.80 E-value=43 Score=31.60 Aligned_cols=48 Identities=13% Similarity=0.120 Sum_probs=29.1
Q ss_pred hcccccccCccCccChHHHHHHHHHhhCCCCceEEEECCCCCccceeehhhhhhcc
Q 017851 284 YGNIVLSGGSTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASL 339 (365)
Q Consensus 284 ~~nIvl~GG~s~i~g~~~RL~~el~~~~~~~~~v~v~~~~~~~~~~w~Gasi~a~l 339 (365)
.+.|.++||.|+-+-+.+-+..-+ . ..|.+ ++....++-+||+++|..
T Consensus 387 ~~~i~~~GG~a~s~~~~Qi~Adv~-g-----~pV~~--~~~~e~~~alGAA~lA~~ 434 (484)
T 2itm_A 387 PQSVTLIGGGARSEYWRQMLADIS-G-----QQLDY--RTGGDVGPALGAARLAQI 434 (484)
T ss_dssp CSCEEEESGGGCCHHHHHHHHHHH-C-----CCEEE--ESCTTSCHHHHHHHHHHH
T ss_pred cceEEEEeccccCHHHHHHHHHHh-C-----CeEEe--CCCCCcccHHHHHHHHHH
Confidence 366999999998766655444333 1 13333 333334456788888754
No 59
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=21.54 E-value=33 Score=31.86 Aligned_cols=52 Identities=15% Similarity=0.132 Sum_probs=31.2
Q ss_pred ccccccCccCc-cChHHHHHHHHHhhCCC--CceEEEECCCCCccceeehhhhhhc
Q 017851 286 NIVLSGGSTMF-PGIADRMSKEISALAPS--SMKIKVVAPPERKYSVWIGGSILAS 338 (365)
Q Consensus 286 nIvl~GG~s~i-~g~~~RL~~el~~~~~~--~~~v~v~~~~~~~~~~w~Gasi~a~ 338 (365)
.|+|.||.+.. +-|.+++++.+.+.... ...++|..+..... ..+||+.++-
T Consensus 360 ~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~~-~~~GAa~l~~ 414 (429)
T 1z05_A 360 KILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYKQ-ATMPGAALIK 414 (429)
T ss_dssp EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSSC-TTHHHHHHHH
T ss_pred EEEEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCCc-cHHHHHHHHH
Confidence 48888887763 45777888777765321 01344544333344 7789887763
Done!