Query 017856
Match_columns 365
No_of_seqs 456 out of 3286
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 06:02:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017856.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017856hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h87_A Kanadaptin; FHA domain 99.9 4.2E-22 1.4E-26 166.0 10.7 101 228-343 18-129 (130)
2 4hb9_A Similarities with proba 99.9 1.9E-21 6.6E-26 189.5 15.2 118 18-141 265-382 (412)
3 3va4_A Mediator of DNA damage 99.8 6.7E-21 2.3E-25 159.0 11.6 93 242-349 36-130 (132)
4 2pie_A E3 ubiquitin-protein li 99.8 2.1E-20 7.1E-25 157.5 11.6 105 225-345 4-117 (138)
5 3gqs_A Adenylate cyclase-like 99.8 3E-20 1E-24 149.5 11.3 99 228-345 2-102 (106)
6 1uht_A Expressed protein; FHA 99.8 4.3E-20 1.5E-24 151.5 12.0 93 230-336 12-105 (118)
7 3rp8_A Flavoprotein monooxygen 99.8 8.2E-20 2.8E-24 179.3 16.1 148 2-166 239-386 (407)
8 3po8_A RV0020C protein, putati 99.8 9.2E-20 3.1E-24 145.1 10.8 83 243-345 15-97 (100)
9 2xt9_B Putative signal transdu 99.8 1.3E-19 4.3E-24 148.0 11.8 96 227-344 8-104 (115)
10 2kb3_A Oxoglutarate dehydrogen 99.8 1.1E-19 3.6E-24 153.8 11.1 97 226-344 42-139 (143)
11 2jqj_A DNA damage response pro 99.8 1.1E-19 3.9E-24 155.3 11.0 97 232-347 20-124 (151)
12 2csw_A Ubiquitin ligase protei 99.8 4E-20 1.4E-24 157.0 7.3 95 225-335 12-111 (145)
13 3els_A PRE-mRNA leakage protei 99.8 6.5E-20 2.2E-24 157.6 8.6 101 228-336 29-146 (158)
14 1gxc_A CHK2, CDS1, serine/thre 99.8 3.1E-19 1.1E-23 152.3 11.9 103 225-345 24-141 (149)
15 2kfu_A RV1827 PThr 22; FHA dom 99.8 4.1E-19 1.4E-23 153.0 11.4 96 228-345 53-149 (162)
16 2jpe_A Nuclear inhibitor of pr 99.8 3.4E-20 1.2E-24 156.6 4.0 94 228-335 32-128 (140)
17 1r21_A Antigen KI-67; beta san 99.8 2E-19 6.7E-24 149.6 8.6 84 243-345 25-108 (128)
18 1mzk_A Kinase associated prote 99.8 8.3E-19 2.8E-23 147.9 12.5 94 231-336 8-113 (139)
19 1lgp_A Cell cycle checkpoint p 99.8 3.1E-19 1.1E-23 145.9 9.6 100 230-345 3-111 (116)
20 1dmz_A Protein (protein kinase 99.8 5.4E-19 1.9E-23 152.1 9.6 100 232-346 7-126 (158)
21 3oun_A Putative uncharacterize 99.8 4.8E-19 1.7E-23 151.3 8.6 80 243-342 77-156 (157)
22 2vou_A 2,6-dihydroxypyridine h 99.8 2E-18 6.8E-23 169.1 14.2 112 19-144 257-369 (397)
23 3elv_A PRE-mRNA leakage protei 99.8 5.8E-19 2E-23 156.3 8.8 101 228-336 76-193 (205)
24 3hx1_A SLR1951 protein; P74513 99.8 1.1E-18 3.8E-23 145.5 10.0 89 231-338 12-110 (131)
25 2xdo_A TETX2 protein; tetracyc 99.8 5.1E-18 1.7E-22 166.3 14.7 113 18-141 267-383 (398)
26 1qu5_A Protein kinase SPK1; FH 99.8 4.5E-19 1.5E-23 155.8 6.4 107 225-345 23-149 (182)
27 1g3g_A Protien kinase SPK1; FH 99.7 2E-18 6.8E-23 149.5 9.0 104 229-345 32-148 (164)
28 1wln_A Afadin; beta sandwich, 99.7 3.7E-18 1.3E-22 140.3 10.2 85 243-345 28-114 (120)
29 3c96_A Flavin-containing monoo 99.7 1.1E-17 3.8E-22 164.5 14.4 108 18-137 256-366 (410)
30 1g6g_A Protein kinase RAD53; b 99.7 1.4E-17 4.8E-22 138.2 11.5 79 256-345 37-120 (127)
31 3c4a_A Probable tryptophan hyd 99.7 1.4E-18 4.8E-23 169.4 5.0 132 19-167 222-353 (381)
32 2ff4_A Probable regulatory pro 99.7 2.2E-17 7.5E-22 162.0 10.9 88 244-350 299-386 (388)
33 2x3n_A Probable FAD-dependent 99.7 6.6E-17 2.3E-21 158.0 10.8 120 20-145 241-361 (399)
34 3fm8_A Kinesin-like protein KI 99.6 9.9E-16 3.4E-20 126.0 10.9 96 230-343 26-122 (124)
35 4ejq_A Kinesin-like protein KI 99.6 9.8E-16 3.3E-20 131.1 10.9 100 231-345 39-144 (154)
36 3alj_A 2-methyl-3-hydroxypyrid 99.6 3.9E-17 1.3E-21 158.8 1.2 107 22-138 236-345 (379)
37 3huf_A DNA repair and telomere 99.6 1.1E-15 3.7E-20 142.6 10.0 101 231-345 2-114 (325)
38 2qa2_A CABE, polyketide oxygen 99.6 1.1E-15 3.9E-20 154.5 11.1 80 58-144 272-351 (499)
39 2qa1_A PGAE, polyketide oxygen 99.6 1.6E-15 5.4E-20 153.5 11.1 80 58-144 271-350 (500)
40 1pn0_A Phenol 2-monooxygenase; 99.6 3E-15 1E-19 156.4 11.2 91 47-144 331-424 (665)
41 3fmw_A Oxygenase; mithramycin, 99.6 2.5E-15 8.5E-20 154.4 10.1 117 17-144 278-395 (570)
42 2r0c_A REBC; flavin adenine di 99.5 7.4E-15 2.5E-19 150.2 9.4 81 57-144 302-382 (549)
43 3ihg_A RDME; flavoenzyme, anth 99.5 2.6E-14 8.9E-19 145.3 13.1 78 58-142 295-372 (535)
44 3ihm_A Styrene monooxygenase A 99.5 9.9E-15 3.4E-19 144.7 8.4 109 19-138 254-373 (430)
45 1k0i_A P-hydroxybenzoate hydro 99.5 3E-14 1E-18 138.8 10.4 79 58-144 273-351 (394)
46 2dkh_A 3-hydroxybenzoate hydro 99.5 1.2E-14 4.3E-19 151.1 8.0 90 47-143 311-414 (639)
47 4a0e_A YSCD, type III secretio 99.4 7.8E-13 2.7E-17 107.4 8.9 96 229-346 3-99 (123)
48 3kt9_A Aprataxin; FHA domain, 99.4 3.4E-12 1.2E-16 100.8 10.8 94 230-343 4-99 (102)
49 3uv0_A Mutator 2, isoform B; F 99.4 9.4E-13 3.2E-17 102.0 6.7 67 254-335 20-93 (102)
50 3atr_A Conserved archaeal prot 99.3 1.9E-12 6.4E-17 128.9 6.8 84 55-144 273-356 (453)
51 3i6u_A CDS1, serine/threonine- 99.3 4.7E-12 1.6E-16 124.9 8.9 100 227-344 6-120 (419)
52 3e1t_A Halogenase; flavoprotei 99.3 1.1E-11 3.8E-16 125.4 9.7 111 21-138 248-364 (512)
53 2gmh_A Electron transfer flavo 99.2 3.1E-12 1.1E-16 131.7 5.2 110 21-137 304-419 (584)
54 3oz2_A Digeranylgeranylglycero 99.2 4.4E-11 1.5E-15 115.1 12.8 73 58-136 271-343 (397)
55 2brf_A Bifunctional polynucleo 99.2 6.3E-11 2.1E-15 94.5 11.0 98 228-344 7-106 (110)
56 3cgv_A Geranylgeranyl reductas 99.2 7.7E-11 2.6E-15 114.1 11.7 82 57-144 270-351 (397)
57 2pyx_A Tryptophan halogenase; 99.1 4.2E-11 1.4E-15 121.6 7.5 102 20-138 309-410 (526)
58 3i3l_A Alkylhalidase CMLS; fla 99.1 1.3E-10 4.5E-15 119.7 11.3 113 21-140 265-378 (591)
59 1yj5_C 5' polynucleotide kinas 99.1 4.7E-10 1.6E-14 92.6 10.5 97 229-344 8-106 (143)
60 4egx_A Kinesin-like protein KI 99.1 6.8E-10 2.3E-14 97.3 11.8 80 254-345 90-174 (184)
61 1ujx_A Polynucleotide kinase 3 99.1 2.1E-10 7.2E-15 92.5 6.3 98 229-345 15-114 (119)
62 2aqj_A Tryptophan halogenase, 99.0 2.2E-10 7.4E-15 116.6 4.6 69 59-137 325-393 (538)
63 3nix_A Flavoprotein/dehydrogen 98.9 1.7E-09 5.8E-14 105.7 9.5 107 20-135 244-351 (421)
64 2weu_A Tryptophan 5-halogenase 98.9 4.8E-10 1.6E-14 113.0 5.3 70 59-138 333-402 (511)
65 2e4g_A Tryptophan halogenase; 98.9 5.8E-10 2E-14 113.8 4.8 71 59-139 356-426 (550)
66 1wv3_A Similar to DNA segregat 98.7 7.4E-09 2.5E-13 94.5 5.9 65 255-335 92-162 (238)
67 2bry_A NEDD9 interacting prote 98.3 4.1E-07 1.4E-11 91.6 5.3 62 59-131 388-450 (497)
68 3kkj_A Amine oxidase, flavin-c 95.9 0.0062 2.1E-07 53.0 4.3 36 62-103 293-328 (336)
69 1yvv_A Amine oxidase, flavin-c 92.9 0.083 2.8E-06 48.9 4.4 35 63-103 294-328 (336)
70 1wv3_A Similar to DNA segregat 42.4 24 0.00083 31.2 4.4 34 254-295 20-54 (238)
71 3ega_A Pellino-2, protein pell 32.5 1.6E+02 0.0054 26.2 7.8 31 256-289 89-134 (263)
72 2l52_A Methanosarcina acetivor 32.5 19 0.00066 27.1 1.8 30 300-334 63-94 (99)
73 2cu3_A Unknown function protei 31.8 18 0.00062 24.8 1.4 14 320-333 45-58 (64)
74 2k9x_A Tburm1, uncharacterized 31.7 20 0.0007 27.8 1.8 27 304-333 70-96 (110)
75 3rpf_C Molybdopterin convertin 30.7 32 0.0011 24.2 2.7 25 304-334 45-69 (74)
76 2q5w_D Molybdopterin convertin 27.9 34 0.0012 24.0 2.4 23 304-333 49-71 (77)
77 1wgk_A Riken cDNA 2900073H19 p 27.9 23 0.00078 27.7 1.5 26 304-332 76-101 (114)
78 2g1e_A Hypothetical protein TA 25.7 36 0.0012 24.6 2.2 25 304-333 58-84 (90)
79 2hj1_A Hypothetical protein; s 24.1 41 0.0014 25.4 2.3 28 301-335 58-85 (97)
80 1ryj_A Unknown; beta/alpha pro 23.3 45 0.0016 23.2 2.3 22 304-332 42-63 (70)
81 3po0_A Small archaeal modifier 23.1 38 0.0013 24.6 1.9 25 303-334 60-84 (89)
82 1tyg_B YJBS; alpha beta barrel 23.0 36 0.0012 25.2 1.7 12 321-332 69-80 (87)
83 4g6h_A Rotenone-insensitive NA 22.1 1.1E+02 0.0039 29.7 5.8 37 62-101 363-399 (502)
84 3mml_A Allophanate hydrolase s 21.5 1.2E+02 0.004 28.1 5.3 32 299-335 78-109 (318)
85 1vjk_A Molybdopterin convertin 20.6 49 0.0017 24.6 2.1 23 304-333 70-92 (98)
86 2kl0_A Putative thiamin biosyn 20.2 30 0.001 24.5 0.8 25 304-333 33-59 (73)
No 1
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=99.87 E-value=4.2e-22 Score=165.98 Aligned_cols=101 Identities=23% Similarity=0.393 Sum_probs=82.2
Q ss_pred CCcEEEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEE-----------ECCEEEEE
Q 017856 228 NGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISY-----------KDGAFYLI 296 (365)
Q Consensus 228 ~~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~-----------~~~~~~i~ 296 (365)
...|.|....++. ....+.|. .+..++|||.+. |||++++++|||+||.|.+ .++.|+|+
T Consensus 18 ~~~~~L~v~k~g~-~~~~~~L~---~~~~~~IGR~~~-----~di~l~~~~VSr~HA~I~~r~~~~~~~~~~~~~~~~l~ 88 (130)
T 4h87_A 18 TAPYSLETLKGGT-ILGTRSLK---GTSYCLFGRLSG-----CDVCLEHPSVSRYHAVLQHRASGPDGECDSNGPGFYLY 88 (130)
T ss_dssp CSCCEEEEEETTE-EEEEEECT---TCSEEEEESSTT-----SSEECCCTTSCSSCEEEEEBCCCCCC------CCEEEE
T ss_pred CCCEEEEEEECCe-eeeeEEeC---CCceEEEcCCcC-----CCEEeCCCCcchhcEEEEEecccCccceeccCCcceEe
Confidence 4468787765443 33667776 234489999998 9999999999999999975 35679999
Q ss_pred EcCCCccceeeCCCCceeeecCCCcEEeCCCCEEEECCCceeEEEEE
Q 017856 297 DLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVK 343 (365)
Q Consensus 297 Dl~S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~ 343 (365)
||+|+|||||||+ +|.++.++.|++||+|+||..++ .|.++
T Consensus 89 Dl~StNGT~vNg~-----ri~~~~~~~L~~GD~I~~G~str-~yvl~ 129 (130)
T 4h87_A 89 DLGSTHGTFLNKT-----RIPPRTYCRVHVGHVVRFGGSTR-LFILQ 129 (130)
T ss_dssp ECSCSSCEEETTE-----ECCTTCCEECCTTCEEEETTCSE-EEEEE
T ss_pred eCCCCCceEECCE-----ECCCCceeECCCCCEEEECCceE-EEEEc
Confidence 9999999999999 99999999999999999999854 56654
No 2
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.86 E-value=1.9e-21 Score=189.50 Aligned_cols=118 Identities=25% Similarity=0.404 Sum_probs=104.7
Q ss_pred cchHHHHHHHhcCCCHHHHHHHHcCCccceEEeeeeccCCCCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHH
Q 017856 18 EGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVE 97 (365)
Q Consensus 18 ~~~~e~l~~~~~~w~p~~~~li~~~~~~~~~~~~~~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~ 97 (365)
+...+.+.+.|.+|+|.+.++++.++...+..+.++...+..+|+.|||+|||||||+|+|+.|||+|+||+||++|+++
T Consensus 265 ~~~~~~~~~~~~~~~p~~~~li~~~~~~~~~~~~~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~ 344 (412)
T 4hb9_A 265 EALCDLVQSRMISWDPSLHTLVQQSDMENISPLHLRSMPHLLPWKSSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQK 344 (412)
T ss_dssp HHHHHHHHHHTTTSCHHHHHHHHTSCTTCCEEEEEEECCCCCCCCCCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCChHHHHHHHhcccceeccchhccccccccccccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHH
Confidence 34467788889999999999999888777888888888888899999999999999999999999999999999999999
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 98 LEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAV 141 (365)
Q Consensus 98 L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~~~~ 141 (365)
|..+... ..+++.+|+.||++|++++..+++.|+++..
T Consensus 345 L~~~~~~------~~~~~~aL~~Ye~~R~~~~~~~~~~s~~~~~ 382 (412)
T 4hb9_A 345 LASVASG------HEELVKAISDYEQQMRAYANEIVGISLRSAQ 382 (412)
T ss_dssp HHHHHTT------SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcC------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9987542 2467899999999999999999999987654
No 3
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B
Probab=99.84 E-value=6.7e-21 Score=159.03 Aligned_cols=93 Identities=23% Similarity=0.284 Sum_probs=80.8
Q ss_pred ccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEE--CCEEEEEEcCCCccceeeCCCCceeeecCC
Q 017856 242 VSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVTDNEGRRYRVSSN 319 (365)
Q Consensus 242 ~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~--~~~~~i~Dl~S~nGT~vng~~~~~~~l~~~ 319 (365)
.++.+.|. ...++|||.++ |||+++++.|||.||+|.++ ++.|+|+|++|+|||||||. +++|.++
T Consensus 36 ~g~~~~L~----~~~~~IGR~~~-----~di~l~d~~VSr~HA~i~~~~~~~~~~l~Dl~S~NGT~vNg~---~i~l~~~ 103 (132)
T 3va4_A 36 PERDFPLY----LGKNVVGRSPD-----CSVALPFPSISKQHAVIEISAWNKAPILQDCGSLNGTQIVKP---PRVLPPG 103 (132)
T ss_dssp SCEEEEEC----SEEEEEESSTT-----SSEECCCTTSCTTCEEEEECSTTSCCEEEECSCSSCEEETTT---TEEECTT
T ss_pred CceEEEEC----CCCEEEccCCC-----CCEEeCCCCcChhHEEEEEEcCCCEEEEEECCCCCCeEECCE---EcccCCC
Confidence 44889999 44599999999 99999999999999999997 68899999999999999998 1227888
Q ss_pred CcEEeCCCCEEEECCCceeEEEEEEecCCC
Q 017856 320 FPARFRPSDTIEFGSDKKAIFRVKVIGTPP 349 (365)
Q Consensus 320 ~~~~L~~Gd~I~~G~~~~~~f~~~~~~~~p 349 (365)
.++.|++||+|+||+. .|+|.....+|
T Consensus 104 ~~~~L~~GD~I~lG~~---~l~f~~~~~p~ 130 (132)
T 3va4_A 104 VSHRLRDQELILFADF---PCQYHRLDVPP 130 (132)
T ss_dssp CCEECCTTCEEEETTE---EEEEEECCCCC
T ss_pred CEEECCCCCEEEECCE---EEEEEECCCCC
Confidence 9999999999999999 67777765544
No 4
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=99.83 E-value=2.1e-20 Score=157.54 Aligned_cols=105 Identities=18% Similarity=0.273 Sum_probs=88.6
Q ss_pred hccCCcEEEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCcc----ccccceEEEE-ECCEEEEEEcC
Q 017856 225 RAMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQ----VSKMHARISY-KDGAFYLIDLQ 299 (365)
Q Consensus 225 ~~~~~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~----VSr~Ha~i~~-~~~~~~i~Dl~ 299 (365)
++....|+|+..+... ..+.|. .+..++|||.+. |||+++++. |||.||+|.+ .++.|+|+|++
T Consensus 4 ~~~~~~w~l~~~G~~~---~~~~l~---~~~~~~IGR~~~-----~di~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~ 72 (138)
T 2pie_A 4 MAGGRSWCLRRVGMSA---GWLLLE---DGCEVTVGRGFG-----VTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNK 72 (138)
T ss_dssp GGGCEEEEEEETTCSS---CBEEEC---TTCCEEEESSSS-----SSEECCCSSCTTSSCSSCEEEEECTTSCEEEEECS
T ss_pred CCCCccEEEEEeCCCC---CEEEec---CCCeEEECCCCC-----CCEEeCCCCcCCCCChhHeEEEEcCCCcEEEEECC
Confidence 4556679999987664 567776 244699999998 999999998 9999999999 58889999999
Q ss_pred CCccceeeCCCCceeeecCCCcEEeCCCCEEEECCC----ceeEEEEEEe
Q 017856 300 SEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD----KKAIFRVKVI 345 (365)
Q Consensus 300 S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~----~~~~f~~~~~ 345 (365)
|+|||||||. +|.++.++.|++||+|+||.. ..+.|.++..
T Consensus 73 S~NGT~vNg~-----~l~~~~~~~L~~GD~I~lG~~~~~~~~~~f~~~~~ 117 (138)
T 2pie_A 73 SLNGVWLNRA-----RLEPLRVYSIHQGDYIQLGVPLENKENAEYEYEVT 117 (138)
T ss_dssp CSSCEEETTE-----ECCTTCCEECCTTCEEEESCCCTTCSSCSEEEEEE
T ss_pred CCCCeEECCE-----EcCCCCcEECCCCCEEEECCCCCCCceEEEEEEec
Confidence 9999999998 999989999999999999983 2445666654
No 5
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}
Probab=99.83 E-value=3e-20 Score=149.53 Aligned_cols=99 Identities=21% Similarity=0.433 Sum_probs=82.1
Q ss_pred CCcEEEEEcCCCCCccccEEEeecCCCCCEEEcCCC-CCCCCcceEEeCCccccccceEEEEE-CCEEEEEEcCCCccce
Q 017856 228 NGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSES-HEDFSRTSIVIPSAQVSKMHARISYK-DGAFYLIDLQSEHGTY 305 (365)
Q Consensus 228 ~~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~-~~~~~~~di~l~~~~VSr~Ha~i~~~-~~~~~i~Dl~S~nGT~ 305 (365)
.+.|.|....+.. .++.+.|. . +..++|||.+ . |||+++++.|||.||+|.++ ++.|+|+|++|+||||
T Consensus 2 ~~~~~L~v~~G~~-~g~~~~l~-~--~~~~~iGR~~~~-----~di~l~d~~vSr~Ha~i~~~~~~~~~l~Dl~S~nGt~ 72 (106)
T 3gqs_A 2 PSRFLLKVLAGAN-IGAEFHLD-S--GKTYIVGSDPQV-----ADIVLSDMSISRQHAKIIIGNDNSVLIEDLGSKNGVI 72 (106)
T ss_dssp -CEEEEEECC-CC-TTCEEEEC-T--TCEEEEESCTTT-----CSEECCCTTSCSSCEEEEECTTSCEEEEECSCSSCCE
T ss_pred CceEEEEEEeCCC-CcEEEEEC-C--CCEEEEeECCCc-----CCEEeCCCCcchhhcEEEECCCCcEEEEECcCCCCeE
Confidence 3578887765443 45889998 2 2358999999 6 99999999999999999999 7889999999999999
Q ss_pred eeCCCCceeeecCCCcEEeCCCCEEEECCCceeEEEEEEe
Q 017856 306 VTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 345 (365)
Q Consensus 306 vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~~~ 345 (365)
|||+ ++.+ ++.|++||+|+||.. .|+|...
T Consensus 73 vng~-----~i~~--~~~L~~Gd~i~~G~~---~~~~~~~ 102 (106)
T 3gqs_A 73 VEGR-----KIEH--QSTLSANQVVALGTT---LFLLVDY 102 (106)
T ss_dssp ETTE-----ECSS--EEECCTTCCEEETTE---EEEEEEE
T ss_pred ECCE-----ECCC--CeECCCCCEEEECCE---EEEEEcc
Confidence 9998 8864 579999999999998 6666543
No 6
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.82 E-value=4.3e-20 Score=151.46 Aligned_cols=93 Identities=22% Similarity=0.291 Sum_probs=79.6
Q ss_pred cEEEEEcCCCCCccccEEEeecCCCCCEEEcCC-CCCCCCcceEEeCCccccccceEEEEECCEEEEEEcCCCccceeeC
Q 017856 230 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSE-SHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTD 308 (365)
Q Consensus 230 ~w~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~-~~~~~~~~di~l~~~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT~vng 308 (365)
.|.|+..... ..++.+.|. . +..++|||. +. |||+++++.|||+||+|.++++.|+|+|++|+|||||||
T Consensus 12 ~l~L~v~~g~-~~g~~~~l~-~--~~~~~iGR~~~~-----~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGT~vng 82 (118)
T 1uht_A 12 SLRLVFVKGP-REGDALDYK-P--GSTIRVGRIVRG-----NEIAIKDAGISTKHLRIESDSGNWVIQDLGSSNGTLLNS 82 (118)
T ss_dssp EEEEEESSST-TTTCBCCBC-T--TCCEEEESSSTT-----CSEECCSSSSCTTCEEEEECSSSEEEECCCCSSCCEESS
T ss_pred eEEEEEEeCC-CCCcEEEEC-C--CCEEEEcCCCCC-----CCEEeCCCCCchHHeEEEEECCEEEEEECCCCCCeEECC
Confidence 4556554432 234778887 2 245999999 66 999999999999999999999999999999999999999
Q ss_pred CCCceeeecCCCcEEeCCCCEEEECCCc
Q 017856 309 NEGRRYRVSSNFPARFRPSDTIEFGSDK 336 (365)
Q Consensus 309 ~~~~~~~l~~~~~~~L~~Gd~I~~G~~~ 336 (365)
+ +|.++.++.|++||+|+||...
T Consensus 83 ~-----~l~~~~~~~L~~gd~i~lG~~~ 105 (118)
T 1uht_A 83 N-----ALDPETSVNLGDGDVIKLGEYT 105 (118)
T ss_dssp S-----BCCTTCEEECCTTEEEEETTTE
T ss_pred E-----ECCCCCeEEcCCCCEEEECCeE
Confidence 9 9998889999999999999993
No 7
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.82 E-value=8.2e-20 Score=179.33 Aligned_cols=148 Identities=32% Similarity=0.442 Sum_probs=120.5
Q ss_pred EEEEEeeCCCCCCCCCcchHHHHHHHhcCCCHHHHHHHHcCCccceEEeeeeccCCCCCccCCCEEEecccccccCCCCc
Q 017856 2 QWYAFHKEPAGGVDGPEGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLG 81 (365)
Q Consensus 2 ~W~~~~~~~~~~~~~~~~~~e~l~~~~~~w~p~~~~li~~~~~~~~~~~~~~~~~~~~~w~~grv~LiGDAAH~~~P~~G 81 (365)
+|++....+......++...+.+.+.|.+|.+.+.++++..++..+..+.++...+..+|+.|||+|||||||+|+|+.|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~G 318 (407)
T 3rp8_A 239 YFFFDVPLPAGLAEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPFSRLVRGRVALLGDAGHSTTPDIG 318 (407)
T ss_dssp EEEEEEECCTTCSCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCCCSCCEETTEEECGGGTCCCCGGGS
T ss_pred EEEEEeCCCcCCCCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecCCCCceecCCEEEEEcccccCCcchh
Confidence 46665554443334456778899999999999999999888766666678888777789999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCCChhHHhh
Q 017856 82 QGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLT 161 (365)
Q Consensus 82 qG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (365)
||+|+||+||..|+++|... . +...+|+.|+++|++++..++..++...++++...+. ...+|
T Consensus 319 qG~~~al~da~~La~~L~~~---------~-~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~-------~~~~R 381 (407)
T 3rp8_A 319 QGGCAAMEDAVVLGAVFRQT---------R-DIAAALREYEAQRCDRVRDLVLKARKRCDITHGKDMQ-------LTEAW 381 (407)
T ss_dssp CHHHHHHHHHHHHHHHHHSC---------C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHH-------HHHHH
T ss_pred hhHHHHHHHHHHHHHHHhcC---------C-CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCHH-------HHHHH
Confidence 99999999999999999853 2 5789999999999999999999999888877654332 34566
Q ss_pred hccCC
Q 017856 162 KFRIP 166 (365)
Q Consensus 162 ~~~~~ 166 (365)
+..+.
T Consensus 382 ~~~l~ 386 (407)
T 3rp8_A 382 YQELR 386 (407)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 65544
No 8
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A
Probab=99.81 E-value=9.2e-20 Score=145.10 Aligned_cols=83 Identities=24% Similarity=0.372 Sum_probs=74.2
Q ss_pred cccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEECCEEEEEEcCCCccceeeCCCCceeeecCCCcE
Q 017856 243 SQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPA 322 (365)
Q Consensus 243 ~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT~vng~~~~~~~l~~~~~~ 322 (365)
++.++|. ...++|||.+. |||+++++.|||.||+|.++++.|+|+|++|+|||||||. ++. ++
T Consensus 15 g~~~~l~----~~~~~IGR~~~-----~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~-----~i~---~~ 77 (100)
T 3po8_A 15 GRTYQLR----EGSNIIGRGQD-----AQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNA-----PVQ---EW 77 (100)
T ss_dssp CCEEECC----SEEEEEESSTT-----CSEECCCTTSCSSCEEEEECSSCEEEEECSCSSCCEETTE-----ECS---EE
T ss_pred CcEEEEC----CCCEEEeCCCC-----CCEECCCCCcChhhCEEEEeCCEEEEEECCCCCCEEECCE-----ECc---eE
Confidence 3889998 44599999998 9999999999999999999999999999999999999998 775 68
Q ss_pred EeCCCCEEEECCCceeEEEEEEe
Q 017856 323 RFRPSDTIEFGSDKKAIFRVKVI 345 (365)
Q Consensus 323 ~L~~Gd~I~~G~~~~~~f~~~~~ 345 (365)
.|++||+|+||.. .|+|+..
T Consensus 78 ~L~~gd~i~iG~~---~~~~~~~ 97 (100)
T 3po8_A 78 QLADGDVIRLGHS---EIIVRMH 97 (100)
T ss_dssp ECCTTCEEEETTE---EEEEEEE
T ss_pred ECCCCCEEEECCE---EEEEEEE
Confidence 9999999999998 5555543
No 9
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis}
Probab=99.81 E-value=1.3e-19 Score=147.98 Aligned_cols=96 Identities=24% Similarity=0.378 Sum_probs=80.5
Q ss_pred cCCcEEEEE-cCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEECCEEEEEEcCCCccce
Q 017856 227 MNGEWFLVP-SGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTY 305 (365)
Q Consensus 227 ~~~~w~l~~-~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT~ 305 (365)
+...+.|+. .+... ++.+.|. ...++|||.+. |||+++++.|||+||+|.++++.|+|+|++|+||||
T Consensus 8 p~~~~~L~v~~g~~~--g~~~~l~----~~~~~IGR~~~-----~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~ 76 (115)
T 2xt9_B 8 PSGSALLVVKRGPNA--GSRFLLD----QPTTSAGRHPD-----SDIFLDDVTVSRRHAEFRLEGGEFQVVDVGSLNGTY 76 (115)
T ss_dssp CCSCEEEEEEESTTT--TCEEEEC----SSEEEEESSTT-----SSEECCSTTSCSSCEEEEEETTEEEEEECSCSSCEE
T ss_pred CCCcEEEEEEeCCCC--CeEEEEC----CCCEEECCCCC-----CCEEeCCcccChhheEEEEECCEEEEEECCCCCCeE
Confidence 344455544 44443 3889998 55699999998 999999999999999999999999999999999999
Q ss_pred eeCCCCceeeecCCCcEEeCCCCEEEECCCceeEEEEEE
Q 017856 306 VTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 344 (365)
Q Consensus 306 vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~~ 344 (365)
|||. ++. ++.|++||+|+||.. .|+|..
T Consensus 77 vng~-----~i~---~~~L~~gd~i~iG~~---~l~~~~ 104 (115)
T 2xt9_B 77 VNRE-----PVD---SAVLANGDEVQIGKF---RLVFLT 104 (115)
T ss_dssp ETTE-----ECS---EEEECTTCEEEETTE---EEEEEC
T ss_pred ECCE-----Ecc---eEECCCCCEEEECCE---EEEEEe
Confidence 9998 886 689999999999998 566653
No 10
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A
Probab=99.81 E-value=1.1e-19 Score=153.81 Aligned_cols=97 Identities=23% Similarity=0.356 Sum_probs=81.4
Q ss_pred ccCCcEEEEEc-CCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEECCEEEEEEcCCCccc
Q 017856 226 AMNGEWFLVPS-GSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGT 304 (365)
Q Consensus 226 ~~~~~w~l~~~-~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT 304 (365)
.....|.|+.. +... +..+.|. ...++|||.+. |||+++++.|||+||+|.++++.|+|+|++|+|||
T Consensus 42 ~p~~~~~L~v~~G~~~--g~~~~L~----~~~~~IGR~~~-----~di~l~d~~VSr~Ha~I~~~~~~~~l~DlgS~NGT 110 (143)
T 2kb3_A 42 LPAGSALLVVKRGPNA--GARFLLD----QPTTTAGRHPE-----SDIFLDDVTVSRRHAEFRINEGEFEVVDVGSLNGT 110 (143)
T ss_dssp CSSSCEEEEEEESTTT--TCEEEEC----SSEEEESSCTT-----CSBCCCCSSCCSSSEEEEEETTEEEEEESCCSSCC
T ss_pred CCCccEEEEEEeCCCC--CeEEEeC----CCCeeccCCCC-----CCEEeCCCCcChhhEEEEEECCEEEEEECCCcCCe
Confidence 33445655554 4433 3889998 55699999998 99999999999999999999999999999999999
Q ss_pred eeeCCCCceeeecCCCcEEeCCCCEEEECCCceeEEEEEE
Q 017856 305 YVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 344 (365)
Q Consensus 305 ~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~~ 344 (365)
||||. ++. ++.|++||+|+||.. .|+|..
T Consensus 111 ~VNg~-----~i~---~~~L~~GD~I~iG~~---~l~f~~ 139 (143)
T 2kb3_A 111 YVNRE-----PRN---AQVMQTGDEIQIGKF---RLVFLA 139 (143)
T ss_dssp EETTE-----ECS---EEECCTTEEEEETTE---EEEEEE
T ss_pred EECCE-----Ecc---eEECCCCCEEEECCE---EEEEEe
Confidence 99998 886 689999999999998 566653
No 11
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*
Probab=99.81 E-value=1.1e-19 Score=155.30 Aligned_cols=97 Identities=22% Similarity=0.364 Sum_probs=80.0
Q ss_pred EEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEE--------ECCEEEEEEcCCCcc
Q 017856 232 FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISY--------KDGAFYLIDLQSEHG 303 (365)
Q Consensus 232 ~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~--------~~~~~~i~Dl~S~nG 303 (365)
.|+..+.+. ++.+.|. . +..++|||.+. |||+++++.|||.||+|.+ .++.|+|+|+ |+||
T Consensus 20 ~L~~~~~~~--g~~~~l~-~--~~~~~IGR~~~-----~di~l~d~~VSr~Ha~I~~~~~~~~~~~~~~~~l~Dl-S~NG 88 (151)
T 2jqj_A 20 HLVNLIPGK--EQKVEIT-N--RNVTTIGRSRS-----CDVILSEPDISTFHAEFHLLQMDVDNFQRNLINVIDK-SRNG 88 (151)
T ss_dssp EEEEEETTE--EEEEEEE-C--CSCEEEESSTT-----SSEECCCTTCCTTSEEEEEEEEEETTEEEEEEEEEEC-CSSC
T ss_pred EEEEecCCC--ceEEEEc-C--CCeEEeCCCCC-----CCEEECCCCCccccCEEEEecccCCcCcCCEEEEEEC-CCCC
Confidence 454544433 3788887 2 25599999998 9999999999999999999 7788999999 9999
Q ss_pred ceeeCCCCceeeecCCCcEEeCCCCEEEECCCceeEEEEEEecC
Q 017856 304 TYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGT 347 (365)
Q Consensus 304 T~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~~~~~ 347 (365)
|||||. +|.++ ++.|++||+|.||.+. .|+|.....
T Consensus 89 T~VNg~-----~i~~~-~~~L~~GD~I~lG~~~--~~~f~~~~~ 124 (151)
T 2jqj_A 89 TFINGN-----RLVKK-DYILKNGDRIVFGKSC--SFLFKYASS 124 (151)
T ss_dssp EEETTE-----ECCSS-CEEECSSEEEEETTTE--EEEEEECSS
T ss_pred eEECCE-----EcCCC-ceECCCCCEEEECCCc--EEEEEEcCC
Confidence 999999 99877 8999999999999952 455555543
No 12
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2
Probab=99.80 E-value=4e-20 Score=157.04 Aligned_cols=95 Identities=19% Similarity=0.294 Sum_probs=80.6
Q ss_pred hccCCcEEEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCcc----ccccceEEEEE-CCEEEEEEcC
Q 017856 225 RAMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQ----VSKMHARISYK-DGAFYLIDLQ 299 (365)
Q Consensus 225 ~~~~~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~----VSr~Ha~i~~~-~~~~~i~Dl~ 299 (365)
++....|+|+..+... ..+.|. .+..++|||.+. |||+++++. |||+||+|.++ ++.|+|+||+
T Consensus 12 ~~~~~~w~L~~~G~~~---~~~~l~---~~~~~~IGR~~~-----~di~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~ 80 (145)
T 2csw_A 12 RAGGRSWCLRRVGMSA---GWLLLE---DGCEVTVGRGFG-----VTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNK 80 (145)
T ss_dssp TTCSEEEEECCTTCSC---CBEECC---TTCCEEEESSTT-----SSEECCCSSCGGGSCTTCEEEEECTTSCEEEEBSS
T ss_pred CCCCccEEEEEeCCCC---CeEEeC---CCCcEEECCCCC-----CCEEECCCCcCCCCChhHeEEEEcCCCeEEEEECC
Confidence 3445679999444332 567775 145699999998 999999998 99999999995 8889999999
Q ss_pred CCccceeeCCCCceeeecCCCcEEeCCCCEEEECCC
Q 017856 300 SEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD 335 (365)
Q Consensus 300 S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~ 335 (365)
|+|||||||. +|.++.++.|++||+|+||..
T Consensus 81 S~NGT~vNg~-----~i~~~~~~~L~~GD~I~iG~~ 111 (145)
T 2csw_A 81 SLNGVWLNRA-----RLEPLRVYSIHQGDYIQLGVP 111 (145)
T ss_dssp CSSCEEESSC-----BCCBTCCEECCSSCCEEESCC
T ss_pred CCCCeEECCE-----ECCCCccEECCCCCEEEECCC
Confidence 9999999999 999888999999999999983
No 13
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae}
Probab=99.80 E-value=6.5e-20 Score=157.56 Aligned_cols=101 Identities=22% Similarity=0.307 Sum_probs=81.5
Q ss_pred CCcEEEEEcCCCCC---ccccEEEeecCCCCCEEEcCCCC----------CCCCcceEEeCCccccccceEEEEECCE--
Q 017856 228 NGEWFLVPSGSENV---VSQPIYLSVSHENEPYLIGSESH----------EDFSRTSIVIPSAQVSKMHARISYKDGA-- 292 (365)
Q Consensus 228 ~~~w~l~~~~~~~~---~~~~i~l~~~~~~~~~~IGR~~~----------~~~~~~di~l~~~~VSr~Ha~i~~~~~~-- 292 (365)
...|.|+...++.. ..+.+.|. .+..++|||.+. .....|||+++++.|||+||.|.+.++.
T Consensus 29 ~~~~~l~v~k~g~~~~~~~~~~~L~---~~~~~~IGR~~~~~~~~~~~~~n~~~~~Di~l~~~~VSr~HA~I~~~~~~~~ 105 (158)
T 3els_A 29 RTMYELVIYRKNDKDKGPWKRYDLN---GRSCYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGI 105 (158)
T ss_dssp SCCEEEEEEEGGGGGGCCSEEEECS---SCSEEEEEECCCC---------CCCCCCSEEECCTTSCSSCEEEEEEEETTE
T ss_pred CCceEEEEEeCCccCcccceEEEec---CCCceEeccccccccccccccccccccCCEEcCCCCCCcccEEEEEEccCCe
Confidence 45688887754431 34678887 244699999963 1112399999999999999999998655
Q ss_pred --EEEEEcCCCccceeeCCCCceeeecCCCcEEeCCCCEEEECCCc
Q 017856 293 --FYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDK 336 (365)
Q Consensus 293 --~~i~Dl~S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~~ 336 (365)
|+|+||+|+|||||||. +|.++.++.|++||+|+||..+
T Consensus 106 ~~~~l~Dl~StNGT~VNg~-----ri~~~~~~~L~~GD~I~~G~s~ 146 (158)
T 3els_A 106 LKCYVMDLDSSNGTCLNNV-----VIPGARYIELRSGDVLTLSEFE 146 (158)
T ss_dssp EEEEEEECSCSSCCEETTE-----ECCTTCCEECCTTEEEESSSCG
T ss_pred eEEEEEeCCCCCccEECCE-----EcCCCceEEcCCCCEEEECCCC
Confidence 99999999999999999 9999889999999999999764
No 14
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=99.80 E-value=3.1e-19 Score=152.26 Aligned_cols=103 Identities=19% Similarity=0.260 Sum_probs=84.1
Q ss_pred hccCCcE-EEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCcc---------ccccceEEEEECC---
Q 017856 225 RAMNGEW-FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQ---------VSKMHARISYKDG--- 291 (365)
Q Consensus 225 ~~~~~~w-~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~---------VSr~Ha~i~~~~~--- 291 (365)
++....| .|++...+ ...+.|. ...++|||.+. |||+++++. |||.||+|.+.++
T Consensus 24 ~~~~~~w~~L~~~~~~---~~~i~L~----~~~~~IGR~~~-----~di~l~d~~~~~~~~~~~VSr~Ha~I~~~~~~~~ 91 (149)
T 1gxc_A 24 EPTPAPWARLWALQDG---FANLECV----NDNYWFGRDKS-----CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKN 91 (149)
T ss_dssp -----CCEEEEECSTT---CCCEEEC----SSEEEEESSTT-----CSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTS
T ss_pred CCCCCeeEEEEEcCCC---CceEEEC----CCCEEecCCCC-----CCEEECCccccccccCCcCchhheEEEEECCCCc
Confidence 3444557 66666533 2568998 55699999998 999999985 9999999999866
Q ss_pred --EEEEEEcCCCccceeeCCCCceeeecCCCcEEeCCCCEEEECCCceeEEEEEEe
Q 017856 292 --AFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 345 (365)
Q Consensus 292 --~~~i~Dl~S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~~~ 345 (365)
.|+|+|+ |+|||||||. +|.++.++.|++||+|.||......|.|.-.
T Consensus 92 ~~~~~i~D~-StNGT~VNg~-----~i~~~~~~~L~~GD~I~lG~~~~~~f~f~d~ 141 (149)
T 1gxc_A 92 SYIAYIEDH-SGNGTFVNTE-----LVGKGKRRPLNNNSEIALSLSRNKVFVFFDL 141 (149)
T ss_dssp SEEEEEEEC-CSSCEEETTE-----ECCTTCEEECCTTEEEEESSTTCEEEEEEET
T ss_pred eeEEEEEEC-CCCCeEECCE-----ECCCCCeEECCCCCEEEECCCCCeEEEEEEC
Confidence 8999996 9999999999 9999999999999999999976667887654
No 15
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A
Probab=99.79 E-value=4.1e-19 Score=153.02 Aligned_cols=96 Identities=23% Similarity=0.348 Sum_probs=80.5
Q ss_pred CCcEEEE-EcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEECCEEEEEEcCCCcccee
Q 017856 228 NGEWFLV-PSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYV 306 (365)
Q Consensus 228 ~~~w~l~-~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT~v 306 (365)
...|+|+ ..+... ++.+.|. ...++|||.+. |||+|+++.|||+||+|.++++.|+|+|++|+|||||
T Consensus 53 ~~~~~L~v~~G~~~--g~~~~L~----~~~~~IGR~~~-----~di~l~d~~VSr~HA~I~~~~~~~~l~DlgS~NGT~V 121 (162)
T 2kfu_A 53 PGSALLVVKRGPNA--GSRFLLD----QAITSAGRHPD-----SDIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYV 121 (162)
T ss_dssp SSCCEEEEEESTTC--SCEEETT----SSEEEEESCSS-----SSEESTTTSSSSCSEEEEEETTEEEEECCCCSSCEEE
T ss_pred CccEEEEEEeCCCC--CeEEEEC----CCCEEECCCCC-----CCEEECCCCcChhhEEEEEECCEEEEEECCCCCCeEE
Confidence 3345444 444443 3788888 55599999998 9999999999999999999999999999999999999
Q ss_pred eCCCCceeeecCCCcEEeCCCCEEEECCCceeEEEEEEe
Q 017856 307 TDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 345 (365)
Q Consensus 307 ng~~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~~~ 345 (365)
||. ++. ++.|++||+|+||.. .|+|...
T Consensus 122 Ng~-----~i~---~~~L~~GD~I~iG~~---~l~f~~~ 149 (162)
T 2kfu_A 122 NRE-----PVD---SAVLANGDEVQIGKF---RLVFLTG 149 (162)
T ss_dssp TTB-----CCS---EEECCSSCEEEETTE---EEEEECS
T ss_pred CCE-----Ecc---eEECCCCCEEEECCE---EEEEEeC
Confidence 998 775 589999999999998 5666654
No 16
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus}
Probab=99.79 E-value=3.4e-20 Score=156.61 Aligned_cols=94 Identities=23% Similarity=0.443 Sum_probs=80.6
Q ss_pred CCcEEEEEcCCCCCccccEEEeecCCCC-CEEEcCCCCCCCCcceEEeCCccccccceEEEEEC--CEEEEEEcCCCccc
Q 017856 228 NGEWFLVPSGSENVVSQPIYLSVSHENE-PYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD--GAFYLIDLQSEHGT 304 (365)
Q Consensus 228 ~~~w~l~~~~~~~~~~~~i~l~~~~~~~-~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~--~~~~i~Dl~S~nGT 304 (365)
...|.|+...+.. ..+.+.|. .. .++|||.+.. |||+++++.|||+||+|.+++ +.|+|+||+|+|||
T Consensus 32 ~~~~~L~v~~g~~-~g~~~~l~----~~~~~~IGR~~~~----~di~l~d~~VSr~Ha~i~~~~~~~~~~l~Dl~S~NGT 102 (140)
T 2jpe_A 32 PPGLHLDVVKGDK-LIEKLIID----EKKYYLFGRNPDL----CDFTIDHQSCSRVHAALVYHKHLKRVFLIDLNSTHGT 102 (140)
T ss_dssp CSSCBEEEESSSS-EEEEECCS----SCSBCCBSSCTTT----SSSCCCCSSSCTTSBEEEEBSSSCCEEEECCSCSSCE
T ss_pred CcCEEEEEEcCCC-cceEEEeC----CCCeEEecCCCcc----CCEEeCCCCcChhheEEEEECCCCcEEEEECCCCCCe
Confidence 3457666654332 34678887 43 4999999975 999999999999999999997 89999999999999
Q ss_pred eeeCCCCceeeecCCCcEEeCCCCEEEECCC
Q 017856 305 YVTDNEGRRYRVSSNFPARFRPSDTIEFGSD 335 (365)
Q Consensus 305 ~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~ 335 (365)
||||. +|.++.++.|++||+|+||..
T Consensus 103 ~vNg~-----~l~~~~~~~L~~gd~i~~G~~ 128 (140)
T 2jpe_A 103 FLGHI-----RLEPHKPQQIPIDSTVSFGAS 128 (140)
T ss_dssp ESSSC-----EECSSSCCEECTTCCBBCSSC
T ss_pred EECCE-----ECCCCccEECCCCCEEEECCc
Confidence 99999 999988999999999999998
No 17
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A*
Probab=99.79 E-value=2e-19 Score=149.62 Aligned_cols=84 Identities=25% Similarity=0.278 Sum_probs=76.0
Q ss_pred cccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEECCEEEEEEcCCCccceeeCCCCceeeecCCCcE
Q 017856 243 SQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPA 322 (365)
Q Consensus 243 ~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT~vng~~~~~~~l~~~~~~ 322 (365)
++.+.|. ...++|||.++ |||+++++.|||.||+|.++++.|+|+|++|+|||||||. ++. .++
T Consensus 25 g~~~~l~----~~~~~IGR~~~-----~di~l~d~~VSr~Ha~i~~~~~~~~l~Dl~S~nGt~vNg~-----~i~--~~~ 88 (128)
T 1r21_A 25 GPHFPLS----LSTCLFGRGIE-----CDIRIQLPVVSKQHCKIEIHEQEAILHNFSSTNPTQVNGS-----VID--EPV 88 (128)
T ss_dssp EEEEECC----SSEEEEESSTT-----SSEECCCTTSCTTCEEEEECSSCEEECCCCSSSCCEETTE-----ECS--SCE
T ss_pred ceEEEEC----CCCEEECCCCC-----CCEEECCCCCChhHEEEEEECCEEEEEECCCCCCEEECCE-----ECC--CcE
Confidence 4788888 55699999999 9999999999999999999999999999999999999998 886 478
Q ss_pred EeCCCCEEEECCCceeEEEEEEe
Q 017856 323 RFRPSDTIEFGSDKKAIFRVKVI 345 (365)
Q Consensus 323 ~L~~Gd~I~~G~~~~~~f~~~~~ 345 (365)
.|++||+|.||.. .|+|...
T Consensus 89 ~L~~Gd~i~iG~~---~~~~~~~ 108 (128)
T 1r21_A 89 RLKHGDVITIIDR---SFRYENE 108 (128)
T ss_dssp ECCTTEEEECSSC---EEEEEEC
T ss_pred EcCCCCEEEECCE---EEEEEeC
Confidence 9999999999988 6777664
No 18
>1mzk_A Kinase associated protein phosphatase; beta sandwich, hydrolase; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.79 E-value=8.3e-19 Score=147.87 Aligned_cols=94 Identities=23% Similarity=0.396 Sum_probs=76.9
Q ss_pred EEEEEcCCCCCccccEEEeecCC--CCCEEEcCCCCCCCCcceEEeCCccccccceEEEEECC--EEEEEEcCCCcccee
Q 017856 231 WFLVPSGSENVVSQPIYLSVSHE--NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDG--AFYLIDLQSEHGTYV 306 (365)
Q Consensus 231 w~l~~~~~~~~~~~~i~l~~~~~--~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~~--~~~i~Dl~S~nGT~v 306 (365)
+.|+.... ...++.+.|. ... +..++|||.+. |||+++++.|||+||+|.++++ .|+|+|++|+|||||
T Consensus 8 ~~L~v~~G-~~~g~~~~l~-~~~~~~~~~~IGR~~~-----~di~l~d~~VSr~Ha~i~~~~~~~~~~l~DlgS~NGT~v 80 (139)
T 1mzk_A 8 LFLEVIAG-PAIGLQHAVN-STSSSKLPVKLGRVSP-----SDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLV 80 (139)
T ss_dssp EEEEECSS-TTCSCEEEEC-TTCSTTCSEEEESSSS-----CSEECCCTTSSSEEEEEEEETTTTEEEEEETTCSSCCEE
T ss_pred EEEEEEeC-CCCCeEEEec-CCCCccceEEeeCCCC-----CCEEeCCCCCChHHcEEEEECCCCEEEEEECCCCCCEEE
Confidence 44444432 2234788887 321 13699999999 9999999999999999999964 799999999999999
Q ss_pred eCCCCceeeecC--------CCcEEeCCCCEEEECCCc
Q 017856 307 TDNEGRRYRVSS--------NFPARFRPSDTIEFGSDK 336 (365)
Q Consensus 307 ng~~~~~~~l~~--------~~~~~L~~Gd~I~~G~~~ 336 (365)
||. ++.+ +.++.|++||+|+||...
T Consensus 81 Ng~-----~i~~~~~~~~~~~~~~~L~~GD~I~iG~~~ 113 (139)
T 1mzk_A 81 NSH-----SISHPDLGSRKWGNPVELASDDIITLGTTT 113 (139)
T ss_dssp TTE-----ESSCCCTTTCCCCCCEECCTTEEEECSSSC
T ss_pred CCE-----ECcCcccccccCCceEECCCCCEEEECCEE
Confidence 998 8873 678999999999999993
No 19
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A
Probab=99.79 E-value=3.1e-19 Score=145.86 Aligned_cols=100 Identities=24% Similarity=0.356 Sum_probs=84.2
Q ss_pred cE-EEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCc-cccccceEEEEE--CCEEEEEEcCCCccce
Q 017856 230 EW-FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSA-QVSKMHARISYK--DGAFYLIDLQSEHGTY 305 (365)
Q Consensus 230 ~w-~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~-~VSr~Ha~i~~~--~~~~~i~Dl~S~nGT~ 305 (365)
.| .|++...+. ....+.|. ...++|||.+. |||++++. .|||.||+|.++ ++.|+|+| +|+||||
T Consensus 3 ~wg~L~~~~~~~-~~~~~~l~----~~~~~iGR~~~-----~di~l~~~~~vSr~Ha~i~~~~~~~~~~l~D-~S~NGt~ 71 (116)
T 1lgp_A 3 PWGRLLRLGAEE-GEPHVLLR----KREWTIGRRRG-----CDLSFPSNKLVSGDHCRIVVDEKSGQVTLED-TSTSGTV 71 (116)
T ss_dssp CCEEECCTTCCS-SSCCEEEC----SSEEEEESSTT-----SSEECTTCTTSCTTCEEEEECTTTCCEEEEE-CSSSCCC
T ss_pred CEEEEEEeCCCC-CccEEEEC----CCCEEECCCCC-----CCEEeCCCCCCChhHeEEEEECCCCeEEEEE-CCcCCcE
Confidence 46 677765432 34789998 55699999998 99999875 999999999997 78899999 9999999
Q ss_pred eeCCCCceeeecCCCcEEeCCCCEEEECCCc-----eeEEEEEEe
Q 017856 306 VTDNEGRRYRVSSNFPARFRPSDTIEFGSDK-----KAIFRVKVI 345 (365)
Q Consensus 306 vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~~-----~~~f~~~~~ 345 (365)
|||. +|.++.++.|++||+|.||..+ .+.|.|...
T Consensus 72 vng~-----~l~~~~~~~L~~GD~i~~G~~~~~~~~~~~f~f~~~ 111 (116)
T 1lgp_A 72 INKL-----KVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLYESL 111 (116)
T ss_dssp CCCC-----CCCCSSCCCCCTTCEEEEECCSSCGGGCEEEECCCS
T ss_pred ECCE-----EcCCCCcEECCCCCEEEEeccCCCCCceEEEEEEcc
Confidence 9999 9998889999999999999864 456776544
No 20
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A*
Probab=99.78 E-value=5.4e-19 Score=152.11 Aligned_cols=100 Identities=17% Similarity=0.283 Sum_probs=82.7
Q ss_pred EEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEEC---------------CEEEEE
Q 017856 232 FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD---------------GAFYLI 296 (365)
Q Consensus 232 ~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~---------------~~~~i~ 296 (365)
.|.|..+.. ..+.|.|. .. ..+++|||.+. |||+++++.|||.||+|.+.+ +.|+|+
T Consensus 7 ~L~p~~~~~-~~~~i~L~-~~-~~~~~IGR~~~-----~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~~~~~~~~~~~l~ 78 (158)
T 1dmz_A 7 TLKPLPDSI-IQESLEIQ-QG-VNPFFIGRSED-----CNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYC 78 (158)
T ss_dssp EEEECTTSS-CCCCEEET-TS-CSCEEEESSTT-----SSEECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEEEEE
T ss_pred EEEeCCCCc-cceEEEEc-CC-CceEEECCCCC-----CCEEeCCCCcChHHeEEEEecCccccccccccccccccEEEE
Confidence 466665443 34778887 21 23499999998 999999999999999999976 789999
Q ss_pred EcCCCccceeeCCCCceeeecCCCcEEeCCCCEEEE-----CCCceeEEEEEEec
Q 017856 297 DLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEF-----GSDKKAIFRVKVIG 346 (365)
Q Consensus 297 Dl~S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~-----G~~~~~~f~~~~~~ 346 (365)
|+ |+|||||||. +|.++.++.|++||+|+| |.. .+.|++....
T Consensus 79 Dl-StNGT~VNg~-----ri~~~~~~~L~~GD~I~l~~d~~G~~-~l~f~~~~~~ 126 (158)
T 1dmz_A 79 HT-GTNVSYLNNN-----RMIQGTKFLLQDGDEIKIIWDKNNKF-VIGFKVEIND 126 (158)
T ss_dssp EC-STTCCEETTE-----ECCSSEEEECCSSCCEESCCCTTTTC-CCCEEEECSC
T ss_pred EC-CcCCeEECCE-----EcCCCceEEcCCCCEEEEeecCCCCE-EEEEEEEeCC
Confidence 99 9999999999 999888999999999999 887 4467766543
No 21
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis}
Probab=99.77 E-value=4.8e-19 Score=151.27 Aligned_cols=80 Identities=25% Similarity=0.377 Sum_probs=72.8
Q ss_pred cccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEECCEEEEEEcCCCccceeeCCCCceeeecCCCcE
Q 017856 243 SQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPA 322 (365)
Q Consensus 243 ~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT~vng~~~~~~~l~~~~~~ 322 (365)
.+.+.|. ...++|||.++ |||+|+++.|||.||+|.++++.|+|+|++|+||||||++ +|. +.
T Consensus 77 g~~~~L~----~~~~~IGR~~~-----~dI~L~d~~VSr~HA~I~~~~~~~~l~DlgStNGT~VNG~-----~i~---~~ 139 (157)
T 3oun_A 77 GRTYQLR----EGSNIIGRGQD-----AQFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNA-----PVQ---EW 139 (157)
T ss_dssp CCEEECC----SEEEEEESSTT-----CSEECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTE-----ECS---EE
T ss_pred CeEEEEC----CCcEEEEeCCC-----CCEEeCCCCcChhHEEEEEECCEEEEEECCCCCCeEECCE-----ECc---eE
Confidence 3889998 44599999998 9999999999999999999999999999999999999998 885 68
Q ss_pred EeCCCCEEEECCCceeEEEE
Q 017856 323 RFRPSDTIEFGSDKKAIFRV 342 (365)
Q Consensus 323 ~L~~Gd~I~~G~~~~~~f~~ 342 (365)
.|++||+|+||.. .|+|
T Consensus 140 ~L~~GD~I~lG~~---~l~f 156 (157)
T 3oun_A 140 QLADGDVIRLGHS---EIIV 156 (157)
T ss_dssp ECCTTCEEEETTE---EEEE
T ss_pred ECCCCCEEEECCE---EEEE
Confidence 9999999999998 5554
No 22
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.77 E-value=2e-18 Score=169.14 Aligned_cols=112 Identities=21% Similarity=0.219 Sum_probs=92.3
Q ss_pred chHHHHHHHh-cCCCHHHHHHHHcCCccceEEeeeeccCCCCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHH
Q 017856 19 GKKERLLKIF-EGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVE 97 (365)
Q Consensus 19 ~~~e~l~~~~-~~w~p~~~~li~~~~~~~~~~~~~~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~ 97 (365)
...+++.+.+ ..|.+ +.++++.++. ...+++++. +.++|+.|||+|||||||+|+|+.|||+|+||+||+.|+++
T Consensus 257 ~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~-~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~ 332 (397)
T 2vou_A 257 HNLRQFHSKGESLFKP-FRDLVLNASS--PFVTVVADA-TVDRMVHGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEV 332 (397)
T ss_dssp HHHHHHHHHHTTSCHH-HHHHHHHCSS--CEEEEEEEB-CCSCSEETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhChH-HHHHHhccCC--cceeeeeee-cCCceecCcEEEEeccccccCCcchhhHHHHHHHHHHHHHH
Confidence 3345566666 46877 8888876642 346777776 45789999999999999999999999999999999999999
Q ss_pred HHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017856 98 LEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMAS 144 (365)
Q Consensus 98 L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~~~~~~~ 144 (365)
|... .+++.+|+.|+++|++++..++..|+....+++
T Consensus 333 L~~~----------~~~~~~L~~Ye~~R~~~~~~~~~~s~~~~~~~~ 369 (397)
T 2vou_A 333 FTKN----------HDLRGSLQSWETRQLQQGHAYLNKVKKMASRLQ 369 (397)
T ss_dssp HHHC----------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhcC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9741 356899999999999999999999988776654
No 23
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A
Probab=99.77 E-value=5.8e-19 Score=156.31 Aligned_cols=101 Identities=23% Similarity=0.329 Sum_probs=79.4
Q ss_pred CCcEEEEEcCCCC---CccccEEEeecCCCCCEEEcCCCCCC----------CCcceEEeCCccccccceEEEEEC--C-
Q 017856 228 NGEWFLVPSGSEN---VVSQPIYLSVSHENEPYLIGSESHED----------FSRTSIVIPSAQVSKMHARISYKD--G- 291 (365)
Q Consensus 228 ~~~w~l~~~~~~~---~~~~~i~l~~~~~~~~~~IGR~~~~~----------~~~~di~l~~~~VSr~Ha~i~~~~--~- 291 (365)
...|.|.....+. .....+.|. ....++|||.+..+ ...|||+|+++.|||+||.|.+.. +
T Consensus 76 ~~~~~L~v~k~g~k~~~~i~~~~L~---~~s~y~IGR~~~~~~~~~~~~~~e~~~cDIvL~dp~VSR~HA~I~~~~~~~~ 152 (205)
T 3elv_A 76 RTMYELVIYRKNDKDKGPWKRYDLN---GRSCYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGI 152 (205)
T ss_dssp SCCEEEEEEEGGGCTTCCSEEEECS---SCSEEEEEECCCC---------CCCCCCSEEECCTTSCTTCEEEEEEEETTE
T ss_pred CCceEEEEEeCCCcccccceEEEec---CCCceeecccccccccccccccccCccceEEeCCCCCCcccEEEEEecCCCc
Confidence 3458777764332 133678886 24569999996311 123999999999999999998873 2
Q ss_pred -EEEEEEcCCCccceeeCCCCceeeecCCCcEEeCCCCEEEECCCc
Q 017856 292 -AFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDK 336 (365)
Q Consensus 292 -~~~i~Dl~S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~~ 336 (365)
.|+|+||+|+|||||||. +|.++.++.|++||+|+||...
T Consensus 153 ~~~~l~DLgStNGTfVNG~-----rI~~~~~~~L~~GD~I~fG~s~ 193 (205)
T 3elv_A 153 LKCYVMDLDSSNGTCLNNV-----VIPGARYIELRSGDVLTLSEFE 193 (205)
T ss_dssp EEEEEEECSCSSCCEETTE-----ECCBTSCEECCTTCEEESSSSG
T ss_pred eeEEEEeCCCCCCCeECCE-----ECCCCceeECCCCCEEEECCCC
Confidence 499999999999999999 9998888999999999999864
No 24
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP}
Probab=99.77 E-value=1.1e-18 Score=145.52 Aligned_cols=89 Identities=26% Similarity=0.377 Sum_probs=73.3
Q ss_pred EEEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEE---CC--EEEEEEc-----CC
Q 017856 231 WFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK---DG--AFYLIDL-----QS 300 (365)
Q Consensus 231 w~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~---~~--~~~i~Dl-----~S 300 (365)
.+|+..+... .+.+.|. ...++|||.+. |||+++++.|||.||+|.+. ++ .|+|+|+ +|
T Consensus 12 ~~lvv~~~~~--~~~~~l~----~~~~~IGR~~~-----~di~l~d~~VSr~Ha~I~~~~~~~g~~~~~l~Dl~~~~~~S 80 (131)
T 3hx1_A 12 HILIILDDAG--RREVLLT----ETFYTIGRSPR-----ADIRIKSQFVSRIHAVLVRKSSDDVQAAYRIIDGDEDGQSS 80 (131)
T ss_dssp EEEEEEETTE--EEEEEEC----SSEEEEESSTT-----SSEECCCSSSCTTCEEEEEC------CCEEEEESCTTSCCC
T ss_pred eEEEEECCCC--cEEEEEC----CCCEEECCCCC-----CCEEECCCCcChhheEEEEEccCCCceEEEEEECCCCCCCC
Confidence 3444444433 3788898 55699999999 99999999999999999986 33 4999999 79
Q ss_pred CccceeeCCCCceeeecCCCcEEeCCCCEEEECCCcee
Q 017856 301 EHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKA 338 (365)
Q Consensus 301 ~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~ 338 (365)
+|||||||. ++. .+.|++||+|+||....+
T Consensus 81 ~NGT~vNg~-----~i~---~~~L~~GD~I~iG~~~~~ 110 (131)
T 3hx1_A 81 VNGLMINGK-----KVQ---EHIIQTGDEIVMGPQVSV 110 (131)
T ss_dssp SSCEEETTE-----EES---EEECCTTCEEECSTTCEE
T ss_pred CCceEECCE-----EeE---eEECCCCCEEEECCEEEE
Confidence 999999998 886 389999999999998443
No 25
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.76 E-value=5.1e-18 Score=166.28 Aligned_cols=113 Identities=23% Similarity=0.304 Sum_probs=94.8
Q ss_pred cchHHHHHHHhcCCCHHHHHHHHcCCccceEEeeeeccCCCCCccC-C--CEEEecccccccCCCCchhhhhHHHHHHHH
Q 017856 18 EGKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGR-G--RVTLLGDSVHAMQPNLGQGGCMAIEDGYQL 94 (365)
Q Consensus 18 ~~~~e~l~~~~~~w~p~~~~li~~~~~~~~~~~~~~~~~~~~~w~~-g--rv~LiGDAAH~~~P~~GqG~n~aieDa~~L 94 (365)
+..++.+.+.|.+|.+.+.+++... ..+..++++..+...+|.. + ||+|+|||||+|+|+.|||+|+||+||.+|
T Consensus 267 ~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rv~LiGDAAh~~~P~~GqG~n~ai~Da~~L 344 (398)
T 2xdo_A 267 NSVVDFLLKEFSDWDERYKELIHTT--LSFVGLATRIFPLEKPWKSKRPLPITMIGDAAHLMPPFAGQGVNSGLVDALIL 344 (398)
T ss_dssp HHHHHHHHHHTTTSCHHHHHHHHHC--SCCEEEEEEECCCCSCCCSCCSSCEEECTHHHHCCCCTTSCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCChHHHHHHhCc--ccceeeeeEeccCCCCcccCCCccEEEEeehhccCCCccCccHHHHHHHHHHH
Confidence 3446778888999999999999763 2456778887776678976 5 999999999999999999999999999999
Q ss_pred HHHHHHhhhhcCCCCCccc-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 95 AVELEKACKKSNESKTPID-IVSALKSYERARRLRVAVIHGLARSAAV 141 (365)
Q Consensus 95 a~~L~~~~~~~~~~~~~~~-~~~~l~~Ye~~R~~r~~~~~~~s~~~~~ 141 (365)
+++|... ..+ ++.+|+.|+++|++++..++..+.....
T Consensus 345 a~~L~~~---------~~~~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~ 383 (398)
T 2xdo_A 345 SDNLADG---------KFNSIEEAVKNYEQQMFIYGKEAQEESTQNEI 383 (398)
T ss_dssp HHHHHSC---------CSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhc---------cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999763 124 6899999999999999999988876543
No 26
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.76 E-value=4.5e-19 Score=155.77 Aligned_cols=107 Identities=16% Similarity=0.317 Sum_probs=84.0
Q ss_pred hccCCcEEEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEEC--------------
Q 017856 225 RAMNGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD-------------- 290 (365)
Q Consensus 225 ~~~~~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~-------------- 290 (365)
....+.|+.+...+.....+.|.|. . ...+++|||.+. |||+++++.|||.||+|.+.+
T Consensus 23 ~~~~g~~l~L~~~~~~~~~~~i~L~-~-~~~~~~IGR~~~-----~di~l~d~~VSr~HA~I~~~~~~~g~~~~e~~~~~ 95 (182)
T 1qu5_A 23 KKGNGRFLTLKPLPDSIIQESLEIQ-Q-GVNPFFIGRSED-----CNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQG 95 (182)
T ss_dssp CSSSSCCEEECCCTTSSSCSCCCBT-T-CCSSEEESSSTT-----SSSCCCCTTSCSSCEEEEEECCCCCSSCCSSCCCS
T ss_pred cCCCccEEEEEeCCCCCcceEEEEc-C-CCceEEECCCCC-----CCEEECCCCcChHHeEEEEecCccccccccccccc
Confidence 3444456544333332334678877 1 123499999998 999999999999999999987
Q ss_pred -CEEEEEEcCCCccceeeCCCCceeeecCCCcEEeCCCCEEEE-----CCCceeEEEEEEe
Q 017856 291 -GAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEF-----GSDKKAIFRVKVI 345 (365)
Q Consensus 291 -~~~~i~Dl~S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~-----G~~~~~~f~~~~~ 345 (365)
+.|+|+|+ |+|||||||. +|.++.++.|++||+|+| |.. .+.|++...
T Consensus 96 ~~~~~l~Dl-StNGT~VNg~-----ri~~~~~~~L~~GD~I~l~~d~~G~~-~l~f~~~~~ 149 (182)
T 1qu5_A 96 LDDIWYCHT-GTNVSYLNNN-----RMIQGTKFLLQDGDEIKIIWDKNNKF-VIGFKVEIN 149 (182)
T ss_dssp CCEEEECCC-SSSCCEETTE-----ECCSSEEEECCTTBCCEEEEEGGGTE-EEECCEEES
T ss_pred cceEEEEEC-CcCCeEECCE-----EcCCCcceEcCCCCEEEEEEcCCCCE-EEEEEEEeC
Confidence 89999999 9999999999 999888999999999999 887 445666554
No 27
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*
Probab=99.75 E-value=2e-18 Score=149.49 Aligned_cols=104 Identities=15% Similarity=0.217 Sum_probs=82.7
Q ss_pred CcEEEEEcCCCCCccccEEEeecC--------CCCCEEEcCCCCCCCCcceEEeCCc-cccccceEEEEE-CCEEEEEEc
Q 017856 229 GEWFLVPSGSENVVSQPIYLSVSH--------ENEPYLIGSESHEDFSRTSIVIPSA-QVSKMHARISYK-DGAFYLIDL 298 (365)
Q Consensus 229 ~~w~l~~~~~~~~~~~~i~l~~~~--------~~~~~~IGR~~~~~~~~~di~l~~~-~VSr~Ha~i~~~-~~~~~i~Dl 298 (365)
..|.|+...+. ..+..+.|. .. ....++|||.+. |||+++++ .|||.||+|.++ ++.|+|+|+
T Consensus 32 ~~~~L~v~~G~-~~g~~~~l~-~~~v~~~~~~~~~~~~IGR~~~-----~di~l~d~~~vSr~Ha~I~~~~~g~~~l~Dl 104 (164)
T 1g3g_A 32 IVCRVICTTGQ-IPIRDLSAD-ISQVLKEKRSIKKVWTFGRNPA-----CDYHLGNISRLSNKHFQILLGEDGNLLLNDI 104 (164)
T ss_dssp CCEEEECSSSS-SCCEEECCC-HHHHHHCSSSCCEEEEEESSSS-----SSEECCCCTTTTSSCEEEEECSTTCEEEEEC
T ss_pred ccEEEEEecCC-CCCeEEEec-cccccccccccCCcEEECCCCC-----CCEEeCCcCCcChhHEEEEECCCCCEEEEEC
Confidence 34666655433 333666665 22 012589999999 99999998 699999999995 899999999
Q ss_pred CCCccceeeCCCCceeeecCCCcEEeCCCCEEEECCC---ceeEEEEEEe
Q 017856 299 QSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD---KKAIFRVKVI 345 (365)
Q Consensus 299 ~S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~---~~~~f~~~~~ 345 (365)
|+|||||||. +|.++.++.|++||+|.||.. ..+.|.|...
T Consensus 105 -S~NGT~vNg~-----~i~~~~~~~L~~GD~I~iG~~~~~~~~~f~~~~~ 148 (164)
T 1g3g_A 105 -STNGTWLNGQ-----KVEKNSNQLLSQGDEITVGVGVESDILSLVIFIN 148 (164)
T ss_dssp -CSSCEEETTE-----EECTTEEEECCTTCEEEESCSSTTSCEEEEEEEC
T ss_pred -CCCCeEECCE-----EcCCCCceEcCCCCEEEECCCCCCCcEEEEEEeC
Confidence 9999999999 999888899999999999996 3556777665
No 28
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2
Probab=99.75 E-value=3.7e-18 Score=140.27 Aligned_cols=85 Identities=19% Similarity=0.298 Sum_probs=73.4
Q ss_pred cccEEEeecCCCCCEEEcCC--CCCCCCcceEEeCCccccccceEEEEECCEEEEEEcCCCccceeeCCCCceeeecCCC
Q 017856 243 SQPIYLSVSHENEPYLIGSE--SHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNF 320 (365)
Q Consensus 243 ~~~i~l~~~~~~~~~~IGR~--~~~~~~~~di~l~~~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT~vng~~~~~~~l~~~~ 320 (365)
...+.|. ...++|||. +. |||+++++.|||+||+|.++++.|+|+|++|+|||||||+ +|. +
T Consensus 28 ~~~~~L~----~~~~~IGr~r~~~-----~di~l~~~~vSr~Ha~i~~~~~~~~l~dl~S~ngt~vNg~-----~i~--~ 91 (120)
T 1wln_A 28 PKLYRLQ----LSVTEVGTEKFDD-----NSIQLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVDGQ-----RIS--E 91 (120)
T ss_dssp CCEEECC----SEEEECSSSCCST-----TCCCCCCTTCCSSCEEEEESSSCEEEEESCSSSCEEETSC-----BCS--S
T ss_pred cEEEEEC----CCCEEECCCCCCC-----CcEEECCCCCchhheEEEEcCCEEEEEECCCCCCEEECCE-----EcC--C
Confidence 4678888 445999974 45 9999999999999999999999999999999999999999 886 5
Q ss_pred cEEeCCCCEEEECCCceeEEEEEEe
Q 017856 321 PARFRPSDTIEFGSDKKAIFRVKVI 345 (365)
Q Consensus 321 ~~~L~~Gd~I~~G~~~~~~f~~~~~ 345 (365)
++.|++||+|.||... .|+|...
T Consensus 92 ~~~L~~GD~I~iG~~~--~~~f~~p 114 (120)
T 1wln_A 92 TTMLQSGMRLQFGTSH--VFKFVDP 114 (120)
T ss_dssp CEEECTTCEEEETTTE--EEEEECS
T ss_pred CEECCCCCEEEECCce--EEEEECC
Confidence 6899999999999952 6777643
No 29
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.74 E-value=1.1e-17 Score=164.46 Aligned_cols=108 Identities=40% Similarity=0.665 Sum_probs=93.7
Q ss_pred cchHHHHHHHhcCCCH---HHHHHHHcCCccceEEeeeeccCCCCCccCCCEEEecccccccCCCCchhhhhHHHHHHHH
Q 017856 18 EGKKERLLKIFEGWCD---NVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQL 94 (365)
Q Consensus 18 ~~~~e~l~~~~~~w~p---~~~~li~~~~~~~~~~~~~~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~L 94 (365)
....+++++.|.+|.+ .+.+++..+. .+..++++...+.++|+.|||+|||||||+|+|+.|||+|+||+||.+|
T Consensus 256 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~L 333 (410)
T 3c96_A 256 DGRLEDVLPFFADWDLGWFDIRDLLTRNQ--LILQYPMVDRDPLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIEL 333 (410)
T ss_dssp BCCHHHHHHHHTTCCBTTBCHHHHHHTCS--EEEEEEEEECCCCSCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHHHH
T ss_pred CCCHHHHHHHhcCCCCchhHHHHHHhcCc--ccceeecccCCCccccccCCEEEEecccCCCCCccchhHHHHHHHHHHH
Confidence 4567889999999864 4678887664 4667888887778899999999999999999999999999999999999
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 95 AVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 137 (365)
Q Consensus 95 a~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~ 137 (365)
+++|... .+.+.+|+.|+++|++++..++..++
T Consensus 334 a~~L~~~----------~~~~~~L~~Ye~~r~~~~~~~~~~s~ 366 (410)
T 3c96_A 334 AAALARN----------ADVAAALREYEEARRPTANKIILANR 366 (410)
T ss_dssp HHHHHHC----------SSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcc----------CCHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 9999763 24689999999999999999998887
No 30
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.73 E-value=1.4e-17 Score=138.16 Aligned_cols=79 Identities=20% Similarity=0.311 Sum_probs=70.9
Q ss_pred CEEEcCCCCCCCCcceEEeCCc-cccccceEEEEE-CCEEEEEEcCCCccceeeCCCCceeeecCCCcEEeCCCCEEEEC
Q 017856 256 PYLIGSESHEDFSRTSIVIPSA-QVSKMHARISYK-DGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFG 333 (365)
Q Consensus 256 ~~~IGR~~~~~~~~~di~l~~~-~VSr~Ha~i~~~-~~~~~i~Dl~S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G 333 (365)
.++|||.+. |||+++++ .|||.||.|.++ ++.|+|+|+ |+|||||||. ++.++.++.|++||+|+||
T Consensus 37 ~~~IGR~~~-----~di~l~~~~~vSr~Ha~i~~~~~g~~~l~Dl-S~NGT~vNg~-----~l~~~~~~~L~~Gd~I~lG 105 (127)
T 1g6g_A 37 VWTFGRNPA-----CDYHLGNISRLSNKHFQILLGEDGNLLLNDI-STNGTWLNGQ-----KVEKNSNQLLSQGDEITVG 105 (127)
T ss_dssp EEEEESSTT-----SSEECCSCTTSCSSCEEEEECTTSCEEEEEC-CSSCCEETTE-----ECCTTCCEECCTTCEEEEC
T ss_pred CEEECCCCC-----CCEEeCCCCCCChhHeEEEECCCCcEEEEEC-CcCCeEECCE-----EcCCCCeEEcCCCCEEEEC
Confidence 599999999 99999997 699999999994 889999999 9999999999 9999889999999999999
Q ss_pred CCc---eeEEEEEEe
Q 017856 334 SDK---KAIFRVKVI 345 (365)
Q Consensus 334 ~~~---~~~f~~~~~ 345 (365)
... .+.|.|+..
T Consensus 106 ~~~~~~~i~f~~~~~ 120 (127)
T 1g6g_A 106 VGVESDILSLVIFIN 120 (127)
T ss_dssp TTSGGGCEEEEEEEC
T ss_pred CCccCceEEEEEEeC
Confidence 963 345766654
No 31
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.73 E-value=1.4e-18 Score=169.39 Aligned_cols=132 Identities=21% Similarity=0.261 Sum_probs=96.8
Q ss_pred chHHHHHHHhcCCCHHHHHHHHcCCccceEEeeeeccCCCCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHH
Q 017856 19 GKKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVEL 98 (365)
Q Consensus 19 ~~~e~l~~~~~~w~p~~~~li~~~~~~~~~~~~~~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L 98 (365)
..++.+.+.|++|.+.+ +++... . ..|+++...+..+|+.|||+|+|||||+|+|+.|||+|+||+||.+|+++|
T Consensus 222 ~~~~~l~~~~~~~~~~~-~l~~~~---~-~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L 296 (381)
T 3c4a_A 222 ASAEYVAKVFQAELGGH-GLVSQP---G-LGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKAL 296 (381)
T ss_dssp HHHHHHHHHTHHHHTTC-CCBCCT---T-TCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCCCc-hhhcCC---C-cceeeeccccCCCcccCCEEEEEccccccCCCccccHHHHHHHHHHHHHHH
Confidence 34566777777664432 333221 1 246677667778999999999999999999999999999999999999999
Q ss_pred HHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhhhcCCCChhHHhhhccCCC
Q 017856 99 EKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMASTYKAYLGVGLGPLSFLTKFRIPH 167 (365)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (365)
... .+++.+|+.|+++|++++..++..++....++.....++. .+|..+.|+..+..
T Consensus 297 ~~~----------~~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~--~~~~~~~r~~~~~~ 353 (381)
T 3c4a_A 297 CTE----------DGVPAALKRFEERALPLVQLFRGHADNSRVWFETVEERMH--LSSAEFVQSFDARR 353 (381)
T ss_dssp HHS----------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCC--------CHHHHGGGTT
T ss_pred hcc----------ccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhchhhhhc--CCHHHHHHHHhhcc
Confidence 763 2468999999999999999999999987766654433333 24555666665544
No 32
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=99.71 E-value=2.2e-17 Score=162.00 Aligned_cols=88 Identities=24% Similarity=0.307 Sum_probs=79.2
Q ss_pred ccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEECCEEEEEEcCCCccceeeCCCCceeeecCCCcEE
Q 017856 244 QPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPAR 323 (365)
Q Consensus 244 ~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT~vng~~~~~~~l~~~~~~~ 323 (365)
+.+.|. ...++|||.++ |||+++++.|||.||.|.++++.|+|+|++|+|||||||. ++. .++.
T Consensus 299 ~~~~l~----~~~~~iGR~~~-----~di~l~~~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~-----~i~--~~~~ 362 (388)
T 2ff4_A 299 RGYPLQ----AAATRIGRLHD-----NDIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHE-----RIR--SAVT 362 (388)
T ss_dssp CEEECC----SSEEEEESSTT-----SSEECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTE-----ECS--SEEE
T ss_pred cEEEEC----CCCEEEecCCC-----CeEEECCCccChhHeEEEEECCEEEEEECCCCCCeEECCE-----ECC--CceE
Confidence 789998 55699999999 9999999999999999999999999999999999999998 884 5799
Q ss_pred eCCCCEEEECCCceeEEEEEEecCCCC
Q 017856 324 FRPSDTIEFGSDKKAIFRVKVIGTPPN 350 (365)
Q Consensus 324 L~~Gd~I~~G~~~~~~f~~~~~~~~p~ 350 (365)
|++||+|+||.. .|+|......|.
T Consensus 363 L~~gd~i~~G~~---~~~~~~~~~~p~ 386 (388)
T 2ff4_A 363 LNDGDHIRICDH---EFTFQISAGTHG 386 (388)
T ss_dssp ECTTCEEEETTE---EEEEECSCCCCC
T ss_pred CCCCCEEEECCE---EEEEEeCCCCCC
Confidence 999999999998 777877655554
No 33
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.69 E-value=6.6e-17 Score=158.03 Aligned_cols=120 Identities=23% Similarity=0.276 Sum_probs=97.7
Q ss_pred hHHHHHHHhcCCCHHHH-HHHHcCCccceEEeeeeccCCCCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHH
Q 017856 20 KKERLLKIFEGWCDNVV-DLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVEL 98 (365)
Q Consensus 20 ~~e~l~~~~~~w~p~~~-~li~~~~~~~~~~~~~~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L 98 (365)
..+++.+.++.|.+.+. ..++...+..+..++++......+|+.|||+|+|||||.|+|+.|||+|+||+||..|+++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L 320 (399)
T 2x3n_A 241 RGESLRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADAL 320 (399)
T ss_dssp TSHHHHHHHHTTCCGGGHHHHHTCCCSTTCEECCCCCEECSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhhcCCcchhhHHhcCCccceEEechhhcccccccccCcEEEEechhccCCCcccccHHHHHHHHHHHHHHH
Confidence 45778888889988773 44555543245567777755667899999999999999999999999999999999999999
Q ss_pred HHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 017856 99 EKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMAST 145 (365)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~~~~~~~~ 145 (365)
....+. ..+++.+|+.|+++|++++..++..++...++++.
T Consensus 321 ~~~~~~------~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~ 361 (399)
T 2x3n_A 321 DLALRD------ACALEDALAGYQAERFPVNQAIVSYGHALATSLED 361 (399)
T ss_dssp HHHHTT------SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred Hhhhcc------cchHHHHHHHHHHHhccHHHHHHHHHHHhhhhhcc
Confidence 887431 13568999999999999999999999987766543
No 34
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*
Probab=99.64 E-value=9.9e-16 Score=126.02 Aligned_cols=96 Identities=23% Similarity=0.393 Sum_probs=75.4
Q ss_pred cEEEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEE-CCEEEEEEcCCCccceeeC
Q 017856 230 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK-DGAFYLIDLQSEHGTYVTD 308 (365)
Q Consensus 230 ~w~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~-~~~~~i~Dl~S~nGT~vng 308 (365)
.-+|+-..+.......+...+++ .++|||.++ |||+|+++.|||+||.|... ++.|+|+|++ +|||||||
T Consensus 26 ~PhLvnLn~Dp~~s~~l~y~L~~---~t~IGR~~~-----~DI~L~~~~Vs~~Ha~I~~~~~g~~~l~dl~-~ngt~VNG 96 (124)
T 3fm8_A 26 KCFLVNLNADPALNELLVYYLKE---HTLIGSANS-----QDIQLCGMGILPEHCIIDITSEGQVMLTPQK-NTRTFVNG 96 (124)
T ss_dssp -CEEEETTCCTTSSCCCEEECCS---EEEEESSTT-----CSEECCSTTCCSSCEEEEECTTSCEEEEECT-TCCEEETT
T ss_pred ccEEEEeCCCCccCceEEEECCC---CeEECCCCC-----CCEEECCCCeecceEEEEECCCCeEEEEECC-CCCEEECC
Confidence 44777766554433332222222 389999998 99999999999999999995 8889999995 79999999
Q ss_pred CCCceeeecCCCcEEeCCCCEEEECCCceeEEEEE
Q 017856 309 NEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVK 343 (365)
Q Consensus 309 ~~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~ 343 (365)
+ +|. +++.|++||+|.||... .|+|.
T Consensus 97 ~-----~V~--~~~~L~~GD~I~lG~~~--~FrFn 122 (124)
T 3fm8_A 97 S-----SVS--SPIQLHHGDRILWGNNH--FFRLN 122 (124)
T ss_dssp E-----ECC--SCEEECTTCEEEETTTE--EEEEE
T ss_pred E-----EcC--CcEECCCCCEEEECCCe--EEEEE
Confidence 9 886 57999999999999873 57775
No 35
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=99.63 E-value=9.8e-16 Score=131.12 Aligned_cols=100 Identities=22% Similarity=0.337 Sum_probs=75.7
Q ss_pred EEEEEcCCCCCcccc--EEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEECC----EEEEEEcCCCccc
Q 017856 231 WFLVPSGSENVVSQP--IYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDG----AFYLIDLQSEHGT 304 (365)
Q Consensus 231 w~l~~~~~~~~~~~~--i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~~----~~~i~Dl~S~nGT 304 (365)
-+|+-..+....+.. +.|. .+.++|||.... ..|||+|+++.|||+||.|.++++ .+++.|++|+|||
T Consensus 39 PhLvnLn~Dp~ls~~lvy~L~----~g~t~IGR~~~~--~~~DI~L~~~~Vs~~H~~i~~~~~~~~~~~~~~d~~S~ngt 112 (154)
T 4ejq_A 39 PHLVNLNEDPLMSECLLYYIK----DGITRVGREDGE--RRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPCEGADT 112 (154)
T ss_dssp CEEEECCCCTTCSSEEEEECC----SEEEEEECSSCS--SCCSEECCCTTCCSEEEEEEEECTTSSSCEEEEEECTTCCE
T ss_pred ceEEEecCCcccCceEEEEeC----CCCEEEcCCCCC--CCCCEEECCCCcccccEEEEEecCCCceeEEEEecCCCCce
Confidence 355555444332222 4455 445999997631 129999999999999999999853 5899999999999
Q ss_pred eeeCCCCceeeecCCCcEEeCCCCEEEECCCceeEEEEEEe
Q 017856 305 YVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 345 (365)
Q Consensus 305 ~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~~~ 345 (365)
||||. +|. .++.|++||+|.||... .|+|..+
T Consensus 113 ~VNG~-----~i~--~~~~L~~GD~I~~G~~~--~Frf~~P 144 (154)
T 4ejq_A 113 YVNGK-----KVT--EPSILRSGNRIIMGKSH--VFRFNHP 144 (154)
T ss_dssp EETTE-----ECC--SCEECCTTCEEEETTTE--EEEEECH
T ss_pred EECCE-----EcC--CceECCCCCEEEECCcE--EEEEcCh
Confidence 99998 885 57899999999999873 5777643
No 36
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.62 E-value=3.9e-17 Score=158.82 Aligned_cols=107 Identities=27% Similarity=0.452 Sum_probs=84.6
Q ss_pred HHHHHHhcCCCHHHH---HHHHcCCccceEEeeeeccCCCCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHH
Q 017856 22 ERLLKIFEGWCDNVV---DLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVEL 98 (365)
Q Consensus 22 e~l~~~~~~w~p~~~---~li~~~~~~~~~~~~~~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L 98 (365)
+++.+.|.+|.+.+. +++..+++..+..++++...+..+|+.|||+|+|||||.|+|+.|||+|+||+||..|+++|
T Consensus 236 ~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L 315 (379)
T 3alj_A 236 SSVPIDLEVWVEMFPFLEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDL 315 (379)
T ss_dssp TCSSCCHHHHHHHCGGGHHHHHHHHTCTTCCEEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCchhccHHHHHhhCCccceEEecccccCCCCCcccCcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHh
Confidence 444455555555444 66654432345667888766678999999999999999999999999999999999999998
Q ss_pred HHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 99 EKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 138 (365)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~ 138 (365)
... .+++.+|+.|+++|++++..++..+.+
T Consensus 316 ~~~----------~~~~~~l~~Y~~~r~~~~~~~~~~s~~ 345 (379)
T 3alj_A 316 EEG----------SSVEDALVAWETRIRPITDRCQALSGD 345 (379)
T ss_dssp TSS----------SCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccc----------cCHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 642 246889999999999999999988843
No 37
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=99.62 E-value=1.1e-15 Score=142.62 Aligned_cols=101 Identities=22% Similarity=0.317 Sum_probs=78.8
Q ss_pred EEEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEE-----------CCEEEEEEcC
Q 017856 231 WFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK-----------DGAFYLIDLQ 299 (365)
Q Consensus 231 w~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~-----------~~~~~i~Dl~ 299 (365)
|+|.+.++.. .++++.|. .++ ++|||..... .++|.++|++|||+||+|.+. ...++|+||+
T Consensus 2 WiL~~~~d~~-~Gkr~~L~-pg~---YlIGR~~~~~--~~lI~idD~SISRqHA~I~v~~v~~~dg~~~~~~~l~I~DLg 74 (325)
T 3huf_A 2 WIIEAEGDIL-KGKSRILF-PGT---YIVGRNVSDD--SSHIQVISKSISKRHARFTILTPSEKDYFTGGPCEFEVKDLD 74 (325)
T ss_dssp EEEEESTTTT-TTCCEEEC-SEE---EEEESSCCCB--TTEEECCCTTSCSSCEEEEECCCCHHHHHHCCCCCEEEEECS
T ss_pred cEEeccCccC-CCeEEEec-CCe---EEECCCCCcc--CceeecCCCCccccceEEEEecccccccccCCcceEEEEECC
Confidence 9999976432 34889998 444 9999998621 034688999999999999886 2369999999
Q ss_pred CCccceeeCCCCceeeecCCCcEEe-CCCCEEEECCCceeEEEEEEe
Q 017856 300 SEHGTYVTDNEGRRYRVSSNFPARF-RPSDTIEFGSDKKAIFRVKVI 345 (365)
Q Consensus 300 S~nGT~vng~~~~~~~l~~~~~~~L-~~Gd~I~~G~~~~~~f~~~~~ 345 (365)
|+|||||||+ ++.+ ....| .+||+|+||.... .|+++-.
T Consensus 75 SknGTfVNGe-----rI~~-~~~~L~~dgd~I~fG~~~~-~fRl~W~ 114 (325)
T 3huf_A 75 TKFGTKVNEK-----VVGQ-NGDSYKEKDLKIQLGKCPF-TINAYWR 114 (325)
T ss_dssp CSSCEEETTE-----ECCT-TCEEECSSEEEEEETTCSS-CEEEEEC
T ss_pred CCCCEEECCE-----ECCC-ceeeecCCCCEEEecCCcc-eEEEEEe
Confidence 9999999999 8964 45566 4799999999743 6776643
No 38
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.62 E-value=1.1e-15 Score=154.47 Aligned_cols=80 Identities=24% Similarity=0.313 Sum_probs=70.8
Q ss_pred CCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 58 IFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 137 (365)
Q Consensus 58 ~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~ 137 (365)
..+|+.|||+|+|||||.|+|+.|||+|+||+||++|+++|..+++. ...+.+|+.|+++|++++..++..++
T Consensus 272 a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g-------~~~~~~L~~Ye~eR~~~~~~~~~~s~ 344 (499)
T 2qa2_A 272 VSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSG-------RAPAGLLDTYHEERHPVGRRLLMNTQ 344 (499)
T ss_dssp CSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTT-------SSCTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHHcC-------CCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999987642 12368999999999999999999998
Q ss_pred HHHHHHh
Q 017856 138 SAAVMAS 144 (365)
Q Consensus 138 ~~~~~~~ 144 (365)
....+++
T Consensus 345 ~~~~l~~ 351 (499)
T 2qa2_A 345 AQGMLFL 351 (499)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 7666654
No 39
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.61 E-value=1.6e-15 Score=153.47 Aligned_cols=80 Identities=26% Similarity=0.320 Sum_probs=70.9
Q ss_pred CCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 58 IFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 137 (365)
Q Consensus 58 ~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~ 137 (365)
..+|+.|||+|+|||||.|+|+.|||+|+||+||.+|+++|..+++. ...+.+|+.|+++|++++..++..++
T Consensus 271 a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g-------~~~~~~L~~Y~~eR~~~~~~~~~~s~ 343 (500)
T 2qa1_A 271 VTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNG-------TATEELLDSYHSERHAVGKRLLMNTQ 343 (500)
T ss_dssp CSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTT-------SSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcC-------CCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999987642 12378999999999999999999998
Q ss_pred HHHHHHh
Q 017856 138 SAAVMAS 144 (365)
Q Consensus 138 ~~~~~~~ 144 (365)
....+++
T Consensus 344 ~~~~l~~ 350 (500)
T 2qa1_A 344 AQGLLFL 350 (500)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 7666654
No 40
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.59 E-value=3e-15 Score=156.45 Aligned_cols=91 Identities=22% Similarity=0.260 Sum_probs=76.0
Q ss_pred eEEeeeecc--CCCCCcc-CCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHH
Q 017856 47 ILRRDIYDR--TPIFTWG-RGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYER 123 (365)
Q Consensus 47 ~~~~~~~~~--~~~~~w~-~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~ 123 (365)
+..+.+|.. ...++|+ .|||+|+|||||.|+|++|||+|+||+||++|+++|..+++. ...+.+|+.|++
T Consensus 331 ~~~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g-------~a~~~lL~tYe~ 403 (665)
T 1pn0_A 331 LDWFTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTG-------RAKRDILKTYEE 403 (665)
T ss_dssp EEEEEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTT-------CBCGGGGHHHHH
T ss_pred EEEEEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHcC-------CCcHHHHHHHHH
Confidence 344555542 2357898 799999999999999999999999999999999999988652 123679999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 017856 124 ARRLRVAVIHGLARSAAVMAS 144 (365)
Q Consensus 124 ~R~~r~~~~~~~s~~~~~~~~ 144 (365)
+|++++..++..++...++++
T Consensus 404 eR~p~a~~~i~~s~~~~~l~~ 424 (665)
T 1pn0_A 404 ERQPFAQALIDFDHQFSRLFS 424 (665)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999987776654
No 41
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.59 E-value=2.5e-15 Score=154.40 Aligned_cols=117 Identities=20% Similarity=0.151 Sum_probs=87.4
Q ss_pred CcchHHHHHHHhcCCCHHHHHHHHcCCcc-ceEEeeeeccCCCCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHH
Q 017856 17 PEGKKERLLKIFEGWCDNVVDLILATDEE-AILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLA 95 (365)
Q Consensus 17 ~~~~~e~l~~~~~~w~p~~~~li~~~~~~-~~~~~~~~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La 95 (365)
...+.+++.+.+..+.+.. +...... ....+++... ...+|..|||+|+|||||.|+|+.|||+|+||+||.+|+
T Consensus 278 ~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~-~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La 353 (570)
T 3fmw_A 278 GPVTLEDLGAAVARVRGTP---LTLTEPVSWLSRFGDASR-QAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLG 353 (570)
T ss_dssp CCCCHHHHHHHTTSSSSCC---CCCCSCCEEEEEECCCCE-ECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHhhcc---cccceeeeeeEEeecccc-cccccccCCEEEEEecceecCCCcCcCHhHHHHHHHHHH
Confidence 3456788888887764321 1111111 2233333333 357899999999999999999999999999999999999
Q ss_pred HHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017856 96 VELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAAVMAS 144 (365)
Q Consensus 96 ~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~~~~~~~ 144 (365)
++|..+++. ...+.+|+.|+++|++++..++..++....+++
T Consensus 354 ~~La~~~~g-------~~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l~~ 395 (570)
T 3fmw_A 354 WKLAARVRG-------WGSEELLDTYHDERHPVAERVLLNTRAQLALMR 395 (570)
T ss_dssp HHHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHcC-------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999987642 234789999999999999999999987665543
No 42
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.55 E-value=7.4e-15 Score=150.16 Aligned_cols=81 Identities=23% Similarity=0.223 Sum_probs=64.9
Q ss_pred CCCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 57 PIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLA 136 (365)
Q Consensus 57 ~~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s 136 (365)
..++|+.|||+|+|||||.|+|+.|||+|+||+||++|+++|..+++.. ..+.+|+.|+++|+++++.+++.|
T Consensus 302 ~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~-------a~~~lL~~Y~~eR~~~a~~~~~~s 374 (549)
T 2r0c_A 302 VADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRGW-------AGPGLLATYEEERRPVAITSLEEA 374 (549)
T ss_dssp ECSCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHTC-------SCTTTTHHHHHHHHHHHHHHHHC-
T ss_pred hHHhhcCCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999999999876421 225789999999999999999999
Q ss_pred HHHHHHHh
Q 017856 137 RSAAVMAS 144 (365)
Q Consensus 137 ~~~~~~~~ 144 (365)
+....+++
T Consensus 375 ~~~~~~~~ 382 (549)
T 2r0c_A 375 NVNLRRTM 382 (549)
T ss_dssp --------
T ss_pred HHHHHhhc
Confidence 87666554
No 43
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.54 E-value=2.6e-14 Score=145.35 Aligned_cols=78 Identities=27% Similarity=0.425 Sum_probs=69.0
Q ss_pred CCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 58 IFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 137 (365)
Q Consensus 58 ~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~ 137 (365)
..+|..|||+|+|||||.|+|+.|||+|+||+||.+|+++|..+++.. ..+.+|++|+++|+++++.+++.|.
T Consensus 295 a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~-------~~~~lL~~Ye~eR~p~a~~~~~~s~ 367 (535)
T 3ihg_A 295 AERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQ-------AGAGLLDTYEDERKVAAELVVAEAL 367 (535)
T ss_dssp ESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTS-------SCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECccccCCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhcCC-------CcHHHHHhhHHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999876421 2357899999999999999999998
Q ss_pred HHHHH
Q 017856 138 SAAVM 142 (365)
Q Consensus 138 ~~~~~ 142 (365)
...+.
T Consensus 368 ~~~~~ 372 (535)
T 3ihg_A 368 AIYAQ 372 (535)
T ss_dssp HHHHH
T ss_pred HhhHh
Confidence 75543
No 44
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.53 E-value=9.9e-15 Score=144.71 Aligned_cols=109 Identities=22% Similarity=0.204 Sum_probs=84.6
Q ss_pred chHHHHHHHhcCCCHHHHHHHHcCC------ccceE---EeeeeccCCCCCccCCCEEE-ecccccccCCCCchhhhhHH
Q 017856 19 GKKERLLKIFEGWCDNVVDLILATD------EEAIL---RRDIYDRTPIFTWGRGRVTL-LGDSVHAMQPNLGQGGCMAI 88 (365)
Q Consensus 19 ~~~e~l~~~~~~w~p~~~~li~~~~------~~~~~---~~~~~~~~~~~~w~~grv~L-iGDAAH~~~P~~GqG~n~ai 88 (365)
...+.+++.|++|.|.+.+++.... +..+. .++++ ..+..+|..||++| +|||||+|+|+.|||+|+||
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~GDAah~~~p~~g~G~~~a~ 332 (430)
T 3ihm_A 254 AFLDLMLEKLGKHHPSVAERIDPAEFDLANSSLDILQGGVVPAF-RDGHATLNNGKTIIGLGDIQATVDPVLGQGANMAS 332 (430)
T ss_dssp HHHHHHHHHHHHHCHHHHTTBCTTTCEESSSTTSEEEECCCCEE-BCSEEECTTSCEEEECGGGTEECCGGGCCHHHHHH
T ss_pred HHHHHHHHHHHHhCccHHHHHhhchhccccCccceeecceeecc-cccccccCCCCEEEEecCccccCCCchhhhHHHHH
Confidence 3356888889999999988886654 22222 23322 33567899999999 99999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHH-HHHHHHHHHHHH
Q 017856 89 EDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARR-LRVAVIHGLARS 138 (365)
Q Consensus 89 eDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~-~r~~~~~~~s~~ 138 (365)
+||.+|+++|... .+.+++|..|+.+|+ +++..+.+.++.
T Consensus 333 ~da~~l~~~l~~~----------~~~~~~~~~~~~~r~~~~~~~~~~~~~~ 373 (430)
T 3ihm_A 333 YAAWILGEEILAH----------SVYDLRFSEHLERRRQDRVLCATRWTNF 373 (430)
T ss_dssp HHHHHHHHHHHHC----------SCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc----------CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999874 135789999999998 666666655553
No 45
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.52 E-value=3e-14 Score=138.78 Aligned_cols=79 Identities=22% Similarity=0.191 Sum_probs=68.9
Q ss_pred CCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 58 IFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 137 (365)
Q Consensus 58 ~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~ 137 (365)
..+|+.|||+|+|||||+|+|+.|||+|+||+||.+|+++|....+. +.+.+|+.|+++|++++..++..++
T Consensus 273 ~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~--------~~~~~L~~Y~~~r~~~~~~~~~~s~ 344 (394)
T 1k0i_A 273 VEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYRE--------GRGELLERYSAICLRRIWKAERFSW 344 (394)
T ss_dssp EECSEETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHH--------CCGGGGGGHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhcc--------CchHHHHHHHHHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999876432 1256899999999999999999988
Q ss_pred HHHHHHh
Q 017856 138 SAAVMAS 144 (365)
Q Consensus 138 ~~~~~~~ 144 (365)
....+++
T Consensus 345 ~~~~~~~ 351 (394)
T 1k0i_A 345 WMTSVLH 351 (394)
T ss_dssp HHHHHHS
T ss_pred HHHHHhc
Confidence 7666654
No 46
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.51 E-value=1.2e-14 Score=151.11 Aligned_cols=90 Identities=22% Similarity=0.338 Sum_probs=72.5
Q ss_pred eEEeeeeccC--CCCCcc------------CCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhhhcCCCCCcc
Q 017856 47 ILRRDIYDRT--PIFTWG------------RGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPI 112 (365)
Q Consensus 47 ~~~~~~~~~~--~~~~w~------------~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~ 112 (365)
+..+.+|... ...+|. .|||+|+|||||.|+|+.|||+|+||+||++|+++|..+++. .
T Consensus 311 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g-------~ 383 (639)
T 2dkh_A 311 VPWWSVYEIGQRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRK-------Q 383 (639)
T ss_dssp EEEEEEECCCCEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTT-------S
T ss_pred eeEEEecccccchhhhhhccccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcC-------C
Confidence 3445555432 246777 899999999999999999999999999999999999988642 1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 113 DIVSALKSYERARRLRVAVIHGLARSAAVMA 143 (365)
Q Consensus 113 ~~~~~l~~Ye~~R~~r~~~~~~~s~~~~~~~ 143 (365)
..+.+|+.|+++|+++++.++..++...+++
T Consensus 384 a~~~lL~~Ye~eR~~~a~~~~~~s~~~~~~~ 414 (639)
T 2dkh_A 384 CAPELLHTYSSERQVVAQQLIDFDREWAKMF 414 (639)
T ss_dssp BCGGGGHHHHHHHHHHHHHHHHHHHHSCC--
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2357999999999999999999887655444
No 47
>4a0e_A YSCD, type III secretion protein; transport protein, SAD phasing, type III secretion system; 2.04A {Yersinia pestis} PDB: 4d9v_A
Probab=99.40 E-value=7.8e-13 Score=107.36 Aligned_cols=96 Identities=16% Similarity=0.280 Sum_probs=79.0
Q ss_pred CcEEEEEcCCCCCccccEEEeecCCCCCEEEcCCC-CCCCCcceEEeCCccccccceEEEEECCEEEEEEcCCCccceee
Q 017856 229 GEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSES-HEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVT 307 (365)
Q Consensus 229 ~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~-~~~~~~~di~l~~~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT~vn 307 (365)
..|-|...... ..+..++|. ...++||.++ . |||+|.|+.||+.||+|.+.+++|+|+ +|+||||+|
T Consensus 3 ~~~klrvlsG~-~~G~~l~L~----~~~~~IGs~~~~-----~DLvL~D~~Vs~~H~~L~~~~~g~~L~--~s~ngt~vd 70 (123)
T 4a0e_A 3 GSWVCRFYQGK-HRGVEVELP----HGRCVFGSDPLQ-----SDIVLSDSEIAPVHLVLMVDEEGIRLT--DSAEPLLQE 70 (123)
T ss_dssp CCEEEEECSGG-GTTCEEEEC----SEEEEEESCTTT-----CSEECCCTTSCSSCEEEEEETTEEEEE--EESSCCEET
T ss_pred ceEEEEEecCC-CCCcEEEcC----CCcEEECCCCCC-----CCEEEeCCCccceeEEEEECCCeEEEE--eccCCEEEC
Confidence 45755444322 234789998 5569999999 8 999999999999999999999999998 699999999
Q ss_pred CCCCceeeecCCCcEEeCCCCEEEECCCceeEEEEEEec
Q 017856 308 DNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIG 346 (365)
Q Consensus 308 g~~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~~~~ 346 (365)
|. ++..+ ..|.+|+.|++|.. .|+|-...
T Consensus 71 G~-----~v~~~--~~L~~g~~l~lG~~---~l~~~~~~ 99 (123)
T 4a0e_A 71 GL-----PVPLG--TLLRAGSCLEVGFL---LWTFVAVG 99 (123)
T ss_dssp TE-----ECCTT--CBCCTTSCEEETTE---EEEEEETT
T ss_pred CE-----Ecccc--cccCCCCEEEEccE---EEEEEcCC
Confidence 98 77644 38999999999999 77776653
No 48
>3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0
Probab=99.37 E-value=3.4e-12 Score=100.75 Aligned_cols=94 Identities=17% Similarity=0.258 Sum_probs=76.8
Q ss_pred cEEEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEE--CCEEEEEEcCCCccceee
Q 017856 230 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVT 307 (365)
Q Consensus 230 ~w~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~--~~~~~i~Dl~S~nGT~vn 307 (365)
..+|++..+. ..+|.|. . +.+++|||++. +. +.|..+||+|+.|..+ ++.+.|+|++ +|+|+||
T Consensus 4 ~c~L~~~~~~---~~~I~L~-~--g~~v~iGR~p~-----t~--I~DkrcSR~h~~L~~~~~~g~v~vk~lg-~Np~~vn 69 (102)
T 3kt9_A 4 VCWLVRQDSR---HQRIRLP-H--LEAVVIGRGPE-----TK--ITDKKCSRQQVQLKAECNKGYVKVKQVG-VNPTSID 69 (102)
T ss_dssp EEEEEETTST---TCEEECC-B--TCEEEECSSTT-----TC--CCCTTSCSSCEEEEEETTTTEEEEEECS-SSCCEET
T ss_pred eEEEEecCCC---CCcEEcC-C--CCcEEeccCCc-----cc--cccCcccCcceEEEEecCCCEEEEEECc-CCCCeEC
Confidence 4678887643 2779998 3 34467899998 54 4799999999999998 5678999985 9999999
Q ss_pred CCCCceeeecCCCcEEeCCCCEEEECCCceeEEEEE
Q 017856 308 DNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVK 343 (365)
Q Consensus 308 g~~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~ 343 (365)
|. ++.++..+.|++||+|.+-.. ...|++.
T Consensus 70 g~-----~l~k~~~~~L~~GD~l~Ll~~-~~~~~v~ 99 (102)
T 3kt9_A 70 SV-----VIGKDQEVKLQPGQVLHMVNE-LYPYIVE 99 (102)
T ss_dssp TE-----ECCBTCEEEECTTCCEEEETT-EEEEEEE
T ss_pred CE-----EcCCCCeEEeCCCCEEEEccC-CceEEEE
Confidence 98 999999999999999999998 2245444
No 49
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster}
Probab=99.36 E-value=9.4e-13 Score=102.03 Aligned_cols=67 Identities=18% Similarity=0.261 Sum_probs=58.5
Q ss_pred CCCEEEcCCCCCCCCcceEEeCCccccccceEEEEECCEEEEEEcCCCccc-eeeCCCCceeeecCCCcEEeCCCCE---
Q 017856 254 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGT-YVTDNEGRRYRVSSNFPARFRPSDT--- 329 (365)
Q Consensus 254 ~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT-~vng~~~~~~~l~~~~~~~L~~Gd~--- 329 (365)
...+.|||++. |++++++++||+.||.|...+.+.++. .|+||| ||||. ++ .++.|.+||.
T Consensus 20 ~~~~rIGR~~~-----~~l~LddpsVs~~HAti~~~~~G~~~l--~S~nGtVFVNGq-----rv---~~~~I~~gDtI~g 84 (102)
T 3uv0_A 20 DTIYRIGRQKG-----LEISIADESMELAHATACILRRGVVRL--AALVGKIFVNDQ-----EE---TVVDIGMENAVAG 84 (102)
T ss_dssp TCCEEEESSTT-----STEECCCTTSCTTCEEEEEEETTEEEE--EESSSCEEETTE-----EE---SEEEECGGGCBTT
T ss_pred CcEEEEcCCCC-----CcEEECCcccccceEEEEecCCceEEE--EeccCcEEECCE-----Ee---eeEEccCCccccc
Confidence 56799999999 999999999999999998875545552 299995 99998 88 4799999999
Q ss_pred ---EEECCC
Q 017856 330 ---IEFGSD 335 (365)
Q Consensus 330 ---I~~G~~ 335 (365)
++||+.
T Consensus 85 ~v~lrFGnv 93 (102)
T 3uv0_A 85 KVKLRFGNV 93 (102)
T ss_dssp EEEEEETTE
T ss_pred EEEEEecCE
Confidence 899998
No 50
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.30 E-value=1.9e-12 Score=128.95 Aligned_cols=84 Identities=19% Similarity=0.201 Sum_probs=70.7
Q ss_pred cCCCCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHH
Q 017856 55 RTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHG 134 (365)
Q Consensus 55 ~~~~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~ 134 (365)
..+.++|+.||++|+|||||.|+|+.|||+|+||+||..|+++|.+.+.... ...++|+.|+++|++++...+.
T Consensus 273 ~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~------~~~~~L~~Y~~~r~~~~~~~~~ 346 (453)
T 3atr_A 273 RRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGD------FSASGLWDMNICYVNEYGAKQA 346 (453)
T ss_dssp SSCCSCSEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTC------CSTTTTTHHHHHHHHHTHHHHH
T ss_pred CCCCCceecCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcCC------ccHHHHHHHHHHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999999999988654210 1146899999999999999998
Q ss_pred HHHHHHHHHh
Q 017856 135 LARSAAVMAS 144 (365)
Q Consensus 135 ~s~~~~~~~~ 144 (365)
.++...++..
T Consensus 347 ~~~~~~~~~~ 356 (453)
T 3atr_A 347 SLDIFRRFLQ 356 (453)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 8877666543
No 51
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.29 E-value=4.7e-12 Score=124.87 Aligned_cols=100 Identities=19% Similarity=0.256 Sum_probs=80.4
Q ss_pred cCCcE-EEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccc---------cccceEEEEE--CC---
Q 017856 227 MNGEW-FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQV---------SKMHARISYK--DG--- 291 (365)
Q Consensus 227 ~~~~w-~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~V---------Sr~Ha~i~~~--~~--- 291 (365)
....| .|++...+. ..+.|. ...++|||++. ||++++++.| ||+||.|.++ ++
T Consensus 6 ~~~~~g~l~~~~~~~---~~~~l~----~~~~~iGR~~~-----~~~~~~~~~~~~~~~~~~vS~~H~~i~~~~~~~~~~ 73 (419)
T 3i6u_A 6 TPAPWARLWALQDGF---ANLECV----NDNYWFGRDKS-----CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSY 73 (419)
T ss_dssp CCCCSEEEEECSSSS---CCEEEC----SSEEEEESSTT-----SSEETTCTTGGGCSGGGGSCTTCEEEECCEETTTEE
T ss_pred cCCCceEeeecCCCC---CceEec----CCCEEecCCCc-----cCEEECCcccccccccccccccceEEEEEcCCCCce
Confidence 33457 555555432 578888 55599999988 9999999865 9999999765 22
Q ss_pred EEEEEEcCCCccceeeCCCCceeeecCCCcEEeCCCCEEEECCCceeEEEEEE
Q 017856 292 AFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 344 (365)
Q Consensus 292 ~~~i~Dl~S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~~ 344 (365)
.|+|+| +|+||||||+. ++.++...+|.+||.|.||.+....|.+.-
T Consensus 74 ~~~i~D-~S~nGt~vn~~-----~~~~~~~~~l~~~d~i~~~~~~~~~~~~~~ 120 (419)
T 3i6u_A 74 IAYIED-HSGNGTFVNTE-----LVGKGKRRPLNNNSEIALSLSRNKVFVFFD 120 (419)
T ss_dssp CCEEEE-CCSSCEEETTE-----ECCTTCEEECCTTEEEEESSTTCEEEEEEE
T ss_pred EEEEEE-CCcCCceECcc-----cccCCCcccCCCCCEeeeeccccceEEEec
Confidence 299999 89999999998 999999999999999999998655665543
No 52
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.25 E-value=1.1e-11 Score=125.42 Aligned_cols=111 Identities=14% Similarity=0.192 Sum_probs=82.8
Q ss_pred HHHHHHHhcCCCHHHHHHHHcCCcc------ceEEeeeeccCCCCCccCCCEEEecccccccCCCCchhhhhHHHHHHHH
Q 017856 21 KERLLKIFEGWCDNVVDLILATDEE------AILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQL 94 (365)
Q Consensus 21 ~e~l~~~~~~w~p~~~~li~~~~~~------~~~~~~~~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~L 94 (365)
.++.++.+..|.|.+.+++...... .+...+.+.. +..+|..+||+|||||||.|+|+.|||+|+||+||..|
T Consensus 248 ~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~L 326 (512)
T 3e1t_A 248 HEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSY-CNTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLV 326 (512)
T ss_dssp HHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEEESCCE-EESCSBCSSEEECGGGTEECCSTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCchHHHHHhcCccccccccccceeeccccc-cccccccCCEEEEechhhcCCCccccCHHHHHHHHHHH
Confidence 4455555556889988888654311 0111111111 23578889999999999999999999999999999999
Q ss_pred HHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 95 AVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 138 (365)
Q Consensus 95 a~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~ 138 (365)
+++|...+.. ..+...+|+.|++.|+++...+..+...
T Consensus 327 a~~L~~~l~~------~~~~~~aL~~Ye~~~~~~~~~~~~~~~~ 364 (512)
T 3e1t_A 327 ARAINTCLAG------EMSEQRCFEEFERRYRREYGNFYQFLVA 364 (512)
T ss_dssp HHHHHHHTTT------CSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC------CccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999887532 2456889999999999999988877664
No 53
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.25 E-value=3.1e-12 Score=131.72 Aligned_cols=110 Identities=14% Similarity=-0.001 Sum_probs=75.0
Q ss_pred HHHHHHHhcCCCHHHHHHHHcCCccceEEeeee--ccCCCCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHH
Q 017856 21 KERLLKIFEGWCDNVVDLILATDEEAILRRDIY--DRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVEL 98 (365)
Q Consensus 21 ~e~l~~~~~~w~p~~~~li~~~~~~~~~~~~~~--~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L 98 (365)
.+++.+... +|.+.++|+......+....++ ....+++|+.+|++|||||||.|+|+.|||+|+||+||..||++|
T Consensus 304 ~~~l~~~~~--~p~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L 381 (584)
T 2gmh_A 304 FREFQRWKH--HPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESI 381 (584)
T ss_dssp HHHHHHHTT--STTTHHHHTTCEEEEEEEEEEECCGGGGCCCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh--ChHHHHHhCCCeEEEecceEccCCCcccCCccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHH
Confidence 455544333 5777888764321111112232 233457899999999999999999999999999999999999999
Q ss_pred HHhhhhcCCCCCcccHHHH---HHHHHHHHHHH-HHHHHHHHH
Q 017856 99 EKACKKSNESKTPIDIVSA---LKSYERARRLR-VAVIHGLAR 137 (365)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~---l~~Ye~~R~~r-~~~~~~~s~ 137 (365)
..+++.. . ....++ |+.|+++|+++ +.+.+..++
T Consensus 382 ~~~~~~g----~-~~~~~a~~~L~~Ye~~r~~~~v~~~l~~~r 419 (584)
T 2gmh_A 382 FNQLTSE----N-LQSKTIGLHVTEYEDNLKNSWVWKELYSVR 419 (584)
T ss_dssp HHHHTCC----C-CCCSSSSCCCTHHHHHHHTSHHHHHHHHTT
T ss_pred HHHHHcC----C-cchhhhhhhHHHHHHHHHHhHHHHHHHHHh
Confidence 9875321 0 011343 89999999987 555544433
No 54
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.24 E-value=4.4e-11 Score=115.10 Aligned_cols=73 Identities=21% Similarity=0.186 Sum_probs=60.5
Q ss_pred CCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 58 IFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLA 136 (365)
Q Consensus 58 ~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s 136 (365)
..+|+.+||+|+|||||.++|+.|||+|+||+|+..||++|.++++.. ...+.+|+.|++.++++...-+...
T Consensus 271 ~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~------~~~~~~L~~Ye~~~~~~~~~~~~~~ 343 (397)
T 3oz2_A 271 KMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESN------DYSPQMMQKYEKLIKERFERKHLRN 343 (397)
T ss_dssp CSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHT------CCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcC------CccHHHHHHHHHHHHHHHHHHHHHH
Confidence 356788999999999999999999999999999999999999886542 1236899999999888775544333
No 55
>2brf_A Bifunctional polynucleotide phosphatase/kinase; hydrolase/transferase, FHA, forkhead-associated, PNKP, PNK, polynucleotide kinase 3' phosphatase; 1.40A {Homo sapiens} SCOP: b.26.1.2 PDB: 2w3o_A* 1yjm_A*
Probab=99.23 E-value=6.3e-11 Score=94.47 Aligned_cols=98 Identities=13% Similarity=0.239 Sum_probs=75.8
Q ss_pred CCcEEEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEE--CCEEEEEEcCCCccce
Q 017856 228 NGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTY 305 (365)
Q Consensus 228 ~~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~--~~~~~i~Dl~S~nGT~ 305 (365)
....+|+|..++ . ..|.|. .. .+.++|||++. . .+.|..+||+|+.|..+ ++.+.|+|+ ++|+|+
T Consensus 7 ~~~c~L~~~~~~-~--~~I~Lp-~~-~g~~viGR~p~-----t--~I~DkrcSR~hv~L~ad~~~~~v~vk~l-G~Np~~ 73 (110)
T 2brf_A 7 PGRLWLESPPGE-A--PPIFLP-SD-GQALVLGRGPL-----T--QVTDRKCSRTQVELVADPETRTVAVKQL-GVNPST 73 (110)
T ss_dssp -CEEEEECSTTS-S--CCEECC-ST-TCCEEECSBTT-----T--TBCCTTSCSSCEEEEEETTTTEEEEEEC-SSSCCE
T ss_pred CcEEEEEeCCCC-C--CcEEec-cC-CCCEEEcCCCC-----c--ccccccceeeeEEEEEecCCCEEEEEEc-ccCCcE
Confidence 345677777643 2 578883 11 46699999998 2 47899999999999987 688999997 599999
Q ss_pred eeCCCCceeeecCCCcEEeCCCCEEEECCCceeEEEEEE
Q 017856 306 VTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 344 (365)
Q Consensus 306 vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~~ 344 (365)
+||. +|.++..+.|++||.|.|=.. ...|++..
T Consensus 74 vng~-----~l~k~~~~~L~~GD~leLl~g-~y~~~v~f 106 (110)
T 2brf_A 74 TGTQ-----ELKPGLEGSLGVGDTLYLVNG-LHPLTLRW 106 (110)
T ss_dssp EC-C-----BCCTTCEEEEETTCEEEEETT-EEEEEEEE
T ss_pred ECCE-----EcCCCCEEEecCCCEEEEccC-CeEEEEEe
Confidence 9998 999999999999999999666 22455554
No 56
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.19 E-value=7.7e-11 Score=114.07 Aligned_cols=82 Identities=20% Similarity=0.142 Sum_probs=69.8
Q ss_pred CCCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 57 PIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLA 136 (365)
Q Consensus 57 ~~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s 136 (365)
+..+|..+|++|+|||||.|+|+.|||+|+|++||..|+++|.+.+... .....+|+.|++.|+++....+..+
T Consensus 270 ~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~------~~~~~~l~~Y~~~~~~~~~~~~~~~ 343 (397)
T 3cgv_A 270 VKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESN------DYSPQMMQKYEKLIKERFERKHLRN 343 (397)
T ss_dssp CCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHT------CCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcC------CccHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999999998875421 1236899999999999999888888
Q ss_pred HHHHHHHh
Q 017856 137 RSAAVMAS 144 (365)
Q Consensus 137 ~~~~~~~~ 144 (365)
+...+++.
T Consensus 344 ~~~~~~~~ 351 (397)
T 3cgv_A 344 WVAKEKLA 351 (397)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 87665543
No 57
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.14 E-value=4.2e-11 Score=121.55 Aligned_cols=102 Identities=8% Similarity=-0.053 Sum_probs=73.9
Q ss_pred hHHHHHHHhcCCCHHHHHHHHcCCccceEEeeeeccCCCCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHH
Q 017856 20 KKERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELE 99 (365)
Q Consensus 20 ~~e~l~~~~~~w~p~~~~li~~~~~~~~~~~~~~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~ 99 (365)
..+.+.+.+..|.+.+ ...+ ...+++.... ..+|..|||+|||||||.|+|+.|||+|+||+||..|+++|.
T Consensus 309 ~~~~l~~~l~~~~~~l----~~~~---~~~~~~~~~~-~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~ 380 (526)
T 2pyx_A 309 AQKTLFNYLGVDGAAA----DKLE---PRQLAINPGY-RAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLP 380 (526)
T ss_dssp HHHHHHHHHTCCHHHH----HHCC---CEEEECCCEE-ESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhcCccc----ccCC---ceEEecccCc-cccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhh
Confidence 3456677777764432 2222 2223333222 356778999999999999999999999999999999999885
Q ss_pred HhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 100 KACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 138 (365)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~ 138 (365)
.. ....+.+|+.|+++|+++.+.+..+...
T Consensus 381 ~~---------~~~~~~~l~~Y~~~~~~~~~~~~~~~~~ 410 (526)
T 2pyx_A 381 PN---------RMVMDTISARVNERYQQHWQQIIDFLKL 410 (526)
T ss_dssp SC---------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hc---------CCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 1235789999999999999888775543
No 58
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.14 E-value=1.3e-10 Score=119.68 Aligned_cols=113 Identities=14% Similarity=0.180 Sum_probs=85.3
Q ss_pred HHHHHHHhcCCCHHHHHHHHcCCc-cceEEeeeeccCCCCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHH
Q 017856 21 KERLLKIFEGWCDNVVDLILATDE-EAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELE 99 (365)
Q Consensus 21 ~e~l~~~~~~w~p~~~~li~~~~~-~~~~~~~~~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~ 99 (365)
.+++.+.+..+.|.+.+.+..... ......+.+.. ...+|..+|++|||||||.|+|+.|||+|+|++||..|+++|.
T Consensus 265 ~~~~~~~l~~~~p~l~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~ 343 (591)
T 3i3l_A 265 ADAFYSSTLAKCAKAMDILGGAEQVDEVRIVQDWSY-DTEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAID 343 (591)
T ss_dssp HHHHHHHHHTTCHHHHHHHTTCEECSCCEEEEEEEE-EESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHhcCccccCceEeccccc-chhhcccCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHH
Confidence 355666667778888888764321 11222222222 2357889999999999999999999999999999999999998
Q ss_pred HhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 100 KACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAA 140 (365)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~~~ 140 (365)
..+.. ....+.+++.|++.|+++...++.+....-
T Consensus 344 ~~l~~------~~~~~~al~~Y~~~~~~~~~~i~~~~~~~Y 378 (591)
T 3i3l_A 344 RITRH------GDEKDAVHAWYNRTYREAYEQYHQFLASFY 378 (591)
T ss_dssp HHHHC------GGGHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhC------CchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87542 234578999999999999999988877533
No 59
>1yj5_C 5' polynucleotide kinase-3' phosphatase FHA domai; beta sandwich, P-loop, transferase; 2.80A {Mus musculus} SCOP: b.26.1.2
Probab=99.10 E-value=4.7e-10 Score=92.63 Aligned_cols=97 Identities=11% Similarity=0.203 Sum_probs=76.6
Q ss_pred CcEEEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEE--CCEEEEEEcCCCcccee
Q 017856 229 GEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYV 306 (365)
Q Consensus 229 ~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~--~~~~~i~Dl~S~nGT~v 306 (365)
+..+|++..++ . ..|.|. .. .+.++|||++. ..|.|..+||+|+.|..+ ++.+.|+++ ++|+|+|
T Consensus 8 ~~c~L~p~d~~-~--~~I~Lp-~~-~g~vvIGRgPe-------t~ItDkRcSR~qv~L~ad~~~g~V~Vk~l-G~NP~~v 74 (143)
T 1yj5_C 8 GRLWLQSPTGG-P--PPIFLP-SD-GQALVLGRGPL-------TQVTDRKCSRNQVELIADPESRTVAVKQL-GVNPSTV 74 (143)
T ss_dssp EEEEEECCTTS-C--CCEECC-TT-TCEEEECSBTT-------TTBCCSSSCSSCEEEEEETTTTEEEEEEC-SSSCCEE
T ss_pred CeEEEEecCCC-C--CcEEec-cC-CCCEEEcCCCc-------cccccccccceeEEEEEecCCCeEEEEEc-ccCCcEE
Confidence 35677777644 2 578883 11 45699999998 357899999999999987 678999998 4799999
Q ss_pred eCCCCceeeecCCCcEEeCCCCEEEECCCceeEEEEEE
Q 017856 307 TDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 344 (365)
Q Consensus 307 ng~~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~~ 344 (365)
||. +|.++..+.|++||.|.|=... ..|+|..
T Consensus 75 ng~-----~L~k~~~~~L~~GD~LeLl~g~-y~f~V~f 106 (143)
T 1yj5_C 75 GVH-----ELKPGLSGSLSLGDVLYLVNGL-YPLTLRW 106 (143)
T ss_dssp TTE-----ECCTTCEEEECTTCEEESSSSC-SEEEEEE
T ss_pred CCE-----EecCCCEEEecCCCEEEEecCC-ceEEEEe
Confidence 998 9999999999999999976652 2566554
No 60
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=99.09 E-value=6.8e-10 Score=97.35 Aligned_cols=80 Identities=23% Similarity=0.347 Sum_probs=64.9
Q ss_pred CCCEEEcCCCCCCCCcceEEeCCccccccceEEEEEC-----CEEEEEEcCCCccceeeCCCCceeeecCCCcEEeCCCC
Q 017856 254 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD-----GAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSD 328 (365)
Q Consensus 254 ~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~-----~~~~i~Dl~S~nGT~vng~~~~~~~l~~~~~~~L~~Gd 328 (365)
.+.++|||.... ..|||+|..+.|++.||.|..++ +.++|.++ +.+.|||||. +|. .++.|++||
T Consensus 90 ~g~t~VGr~~~~--~~~dI~L~G~~I~~~Hc~i~~~~~~~~~~~vtl~p~-~~a~t~VNG~-----~I~--~~~~L~~GD 159 (184)
T 4egx_A 90 DGITRVGREDGE--RRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPC-EGADTYVNGK-----KVT--EPSILRSGN 159 (184)
T ss_dssp SEEEEEECSSSS--SCCSEECCSTTCCSEEEEEEEECCSSCSCEEEEEEC-TTCCEEETTE-----ECC--SCEECCTTC
T ss_pred CCcCcCCCCCcC--CCCeEEECccccccccEEEEEcCCCCceEEEEEeeC-CCCeEEEcCE-----Ecc--ccEEcCCCC
Confidence 344899997542 12899999999999999999873 45888885 6788999998 885 689999999
Q ss_pred EEEECCCceeEEEEEEe
Q 017856 329 TIEFGSDKKAIFRVKVI 345 (365)
Q Consensus 329 ~I~~G~~~~~~f~~~~~ 345 (365)
+|.||... .|+|..+
T Consensus 160 rI~lG~~h--~Frfn~P 174 (184)
T 4egx_A 160 RIIMGKSH--VFRFNHP 174 (184)
T ss_dssp EEEETTTE--EEEEECH
T ss_pred EEEECCCC--EEEECCh
Confidence 99999983 5888654
No 61
>1ujx_A Polynucleotide kinase 3'-phosphatase; DNA repair, FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif; NMR {Mus musculus} SCOP: b.26.1.2
Probab=99.05 E-value=2.1e-10 Score=92.54 Aligned_cols=98 Identities=11% Similarity=0.200 Sum_probs=76.4
Q ss_pred CcEEEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEE--CCEEEEEEcCCCcccee
Q 017856 229 GEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYV 306 (365)
Q Consensus 229 ~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~--~~~~~i~Dl~S~nGT~v 306 (365)
...+|+|..... ..|.|. . ....++|||++. ..+.|..+||+|+.|..+ ++.+.|++++ +|+|+|
T Consensus 15 ~~c~L~~~~~~~---~~I~Lp-~-~~g~~viGRgp~-------t~I~DkrcSR~qv~L~ad~~~~~v~vk~lG-~NP~~v 81 (119)
T 1ujx_A 15 GRLWLQSPTGGP---PPIFLP-S-DGQALVLGRGPL-------TQVTDRKCSRNQVELIADPESRTVAVKQLG-VNPSTV 81 (119)
T ss_dssp CCEEEECCSSSC---CCCCCC-T-TSCCEEESBBTT-------TTBCCTTSCTTSEEEEEETTTTEEEEEECS-SSCCBS
T ss_pred ceEEEEeCCCCC---CcEEec-c-CCCCEEEcCCCC-------cccccccccceeEEEEEecCCCEEEEEEcc-cCCcEE
Confidence 356788876441 467773 1 135699999998 257899999999999987 6889999974 799999
Q ss_pred eCCCCceeeecCCCcEEeCCCCEEEECCCceeEEEEEEe
Q 017856 307 TDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVI 345 (365)
Q Consensus 307 ng~~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~~~ 345 (365)
|+. +|.++..+.|++||.|.|=... ..|+|...
T Consensus 82 ng~-----~l~k~~~~~L~~GD~l~Ll~g~-y~~~v~f~ 114 (119)
T 1ujx_A 82 GVQ-----ELKPGLSGSLSLGDVLYLVNGL-YPLTLRWS 114 (119)
T ss_dssp SSS-----BCCTTCEEEEETTCCCBCBTTB-SCCEEEEC
T ss_pred CCE-----EecCCCEEEecCCCEEEEecCC-eEEEEEec
Confidence 999 9999999999999999976652 14555544
No 62
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.98 E-value=2.2e-10 Score=116.57 Aligned_cols=69 Identities=10% Similarity=-0.037 Sum_probs=58.8
Q ss_pred CCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 59 FTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 137 (365)
Q Consensus 59 ~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~ 137 (365)
.+|..|||+|||||||.|+|+.|||+|+||+||..|+++|... ...+.+|+.|++.|+++.+.+..+..
T Consensus 325 ~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~~----------~~~~~~l~~Y~~~~~~~~~~~~~~~~ 393 (538)
T 2aqj_A 325 KRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPDT----------SFDPRLSDAFNAEIVHMFDDCRDFVQ 393 (538)
T ss_dssp SCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCBT----------TCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhcc----------CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677899999999999999999999999999999999887521 12368999999999999888776444
No 63
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.95 E-value=1.7e-09 Score=105.69 Aligned_cols=107 Identities=11% Similarity=0.082 Sum_probs=76.1
Q ss_pred hHHHHHHHhcCCCHHHHHHHHcCCcc-ceEEeeeeccCCCCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHH
Q 017856 20 KKERLLKIFEGWCDNVVDLILATDEE-AILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVEL 98 (365)
Q Consensus 20 ~~e~l~~~~~~w~p~~~~li~~~~~~-~~~~~~~~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L 98 (365)
..+++++.+..+.|.+.+.+...... .+..++.+... ..+|..++++|+|||||.++|+.|||+|+|++||..|+++|
T Consensus 244 ~~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l 322 (421)
T 3nix_A 244 TPEERMRAMIANEGHIAERFKSEEFLFEPRTIEGYAIS-ASKLYGDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLA 322 (421)
T ss_dssp CHHHHHHHHHHTCTTTHHHHTTCCBSSCCEEEECCCBE-ESCSEETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCcHHHHHHhcCccccCceeeccccee-eeeeccCCEEEecccccccCCcccccHHHHHHHHHHHHHHH
Confidence 44555556555677777777655422 23334443332 35788899999999999999999999999999999999999
Q ss_pred HHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHH
Q 017856 99 EKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGL 135 (365)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~ 135 (365)
.+.+... . ...++.|++.++.....+...
T Consensus 323 ~~~~~~~-----~---~~~~~~y~~~~~~~~~~~~~~ 351 (421)
T 3nix_A 323 VQFLKGE-----E---VNWEKDFVEHMMQGIDTFRSF 351 (421)
T ss_dssp HHHHTTC-----C---CCHHHHTHHHHHHHHHHHHHH
T ss_pred HHHhcCC-----c---hhHHHHHHHHHHHHHHHHHHH
Confidence 8875421 1 136678888887766555433
No 64
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.94 E-value=4.8e-10 Score=113.02 Aligned_cols=70 Identities=11% Similarity=-0.072 Sum_probs=59.9
Q ss_pred CCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 59 FTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 138 (365)
Q Consensus 59 ~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~ 138 (365)
++|..|||+|||||||.|+|+.|||+|+|++||..|+++|... ...+.+|+.|++.|+++...+..+...
T Consensus 333 ~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~~----------~~~~~~l~~Y~~~~~~~~~~~~~~~~~ 402 (511)
T 2weu_A 333 ERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPGE----------RWDPVLISAYNERMAHMVDGVKEFLVL 402 (511)
T ss_dssp SCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCCT----------TCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhccC----------CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677899999999999999999999999999999999988531 123689999999999999888876554
No 65
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.91 E-value=5.8e-10 Score=113.80 Aligned_cols=71 Identities=13% Similarity=0.041 Sum_probs=60.7
Q ss_pred CCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 59 FTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 138 (365)
Q Consensus 59 ~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~ 138 (365)
.+|..+|++|||||||.|+|+.|||+|+|++||..|+++|... ...+.+|+.|+++|+++...+..+...
T Consensus 356 ~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~~----------~~~~~~l~~Y~~~~~~~~~~i~~~~~~ 425 (550)
T 2e4g_A 356 RRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPDK----------SLNPVLTARFNREIETMFDDTRDFIQA 425 (550)
T ss_dssp SCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCCT----------TCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhcccc----------CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567799999999999999999999999999999999887421 134689999999999999988877665
Q ss_pred H
Q 017856 139 A 139 (365)
Q Consensus 139 ~ 139 (365)
.
T Consensus 426 ~ 426 (550)
T 2e4g_A 426 H 426 (550)
T ss_dssp H
T ss_pred H
Confidence 3
No 66
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=98.75 E-value=7.4e-09 Score=94.51 Aligned_cols=65 Identities=17% Similarity=0.159 Sum_probs=55.9
Q ss_pred CCEEEcCCCCCCCCcceEEeCCccccccceEEEEE--C--CEEEEEEcCCCccc-eeeCCCCceeeecCCCcEEeC-CCC
Q 017856 255 EPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--D--GAFYLIDLQSEHGT-YVTDNEGRRYRVSSNFPARFR-PSD 328 (365)
Q Consensus 255 ~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~--~--~~~~i~Dl~S~nGT-~vng~~~~~~~l~~~~~~~L~-~Gd 328 (365)
..++|||.+. |||++++. + |+.+.++ + +.|+|+|++|+||| ||||. ++. ....|+ .||
T Consensus 92 ~~itIG~~~~-----~dI~l~~~-~---~~~~~~~~~~~~~~~~l~~l~s~ngtvyvNg~-----~i~--~~~~L~~~GD 155 (238)
T 1wv3_A 92 DTMTIGPNAY-----DDMVIQSL-M---NAIIIKDFQSIQESQYVRIVHDKNTDVYINYE-----LQE--QLTNKAYIGD 155 (238)
T ss_dssp SEEEEESSTT-----SSEECTTC-S---SCEEEECGGGHHHHCEEEEECCTTCCEEETTE-----ECC--SSEEEEETTC
T ss_pred ceEEEeCCCC-----CeEEeCCC-e---eEEEEecccCcCCcEEEEEccCCCCCEEECCE-----Eec--cceeccCCcC
Confidence 3699999998 99999888 3 6877777 3 58999999999997 99998 775 457899 999
Q ss_pred EEEECCC
Q 017856 329 TIEFGSD 335 (365)
Q Consensus 329 ~I~~G~~ 335 (365)
.|.+|..
T Consensus 156 ~I~ig~~ 162 (238)
T 1wv3_A 156 HIYVEGI 162 (238)
T ss_dssp EEEETTE
T ss_pred EEEECCE
Confidence 9999987
No 67
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.31 E-value=4.1e-07 Score=91.62 Aligned_cols=62 Identities=16% Similarity=0.139 Sum_probs=48.2
Q ss_pred CCccCCC-EEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHH
Q 017856 59 FTWGRGR-VTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAV 131 (365)
Q Consensus 59 ~~w~~gr-v~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~ 131 (365)
.+|..|| |+|+|||||...|..|||+|+||+||..|+++|....++ .....+| ++|++....
T Consensus 388 ~~~~~gRr~~l~Gda~~~~~~p~g~G~n~g~~~a~~l~~~l~~~~~g-------~~~~~~l----~~r~~~~~~ 450 (497)
T 2bry_A 388 EKHGARLLLGLVGDCLVEPFWPLGTGVARGFLAAFDAAWMVKRWAEG-------AGPLEVL----AERESLYQL 450 (497)
T ss_dssp EETTEEEEEEECGGGTBCCCGGGCCHHHHHHHHHHHHHHHHHHHHTT-------CCHHHHH----HHHHHHHTT
T ss_pred HhcCCcccceEeccccccCcCccccchhhHHHHHHHHHHHHHHHhCC-------CCccchh----hhHHHHhhh
Confidence 5788998 999999999544339999999999999999999987532 1234555 777776544
No 68
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.87 E-value=0.0062 Score=53.04 Aligned_cols=36 Identities=17% Similarity=-0.024 Sum_probs=32.2
Q ss_pred cCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhh
Q 017856 62 GRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACK 103 (365)
Q Consensus 62 ~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~ 103 (365)
..+||+|+|||++ |.|++.||.|+..+|+.|.+.++
T Consensus 293 ~~~~v~l~GDa~~------g~gv~~A~~sG~~aA~~I~~~L~ 328 (336)
T 3kkj_A 293 ADLGIYVCGDWCL------SGRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp TTTTEEECCGGGT------TSSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEecccC------CcCHHHHHHHHHHHHHHHHHHhh
Confidence 4799999999964 77999999999999999998865
No 69
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=92.86 E-value=0.083 Score=48.86 Aligned_cols=35 Identities=17% Similarity=-0.023 Sum_probs=30.7
Q ss_pred CCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhh
Q 017856 63 RGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACK 103 (365)
Q Consensus 63 ~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~ 103 (365)
.+|++|+|||+|. .|++.|++++..||+.|.+.+.
T Consensus 294 ~~rl~laGDa~~g------~gv~~a~~sg~~lA~~l~~~~~ 328 (336)
T 1yvv_A 294 DLGIYVCGDWCLS------GRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp TTTEEECCGGGTT------SSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEecCCCC------CCHHHHHHHHHHHHHHHHHHhh
Confidence 4999999999974 4999999999999999987743
No 70
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=42.38 E-value=24 Score=31.19 Aligned_cols=34 Identities=15% Similarity=0.310 Sum_probs=29.1
Q ss_pred CCCEEEcCCCCCCCCcceEEeCCccccccceEEEEEC-CEEEE
Q 017856 254 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD-GAFYL 295 (365)
Q Consensus 254 ~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~-~~~~i 295 (365)
...++||.... |+|.+++. ..|.+|.+++ +.|.|
T Consensus 20 ~~~~tiG~~~~-----~~itl~~~---~~~i~l~~~~~~~~~v 54 (238)
T 1wv3_A 20 GKTYTISEDER-----ADITLKSL---GEVIHLEQNNQGTWQA 54 (238)
T ss_dssp TCCEEEESCTT-----SSEECTTC---CCCEEEEECTTSCEEE
T ss_pred CcEEEECCCcc-----ceEEecCC---CccEEEEEccCCeEEE
Confidence 46799999999 99999877 7888999887 77887
No 71
>3ega_A Pellino-2, protein pellino homolog 2; FHA domain, E3 ubiquitin ligase, substrate binding phosphoprotein, protein binding; 1.80A {Homo sapiens} PDB: 3egb_A
Probab=32.51 E-value=1.6e+02 Score=26.20 Aligned_cols=31 Identities=16% Similarity=0.410 Sum_probs=22.6
Q ss_pred CEEEcCCCCCCCCcceEEe---------------CCccccccceEEEEE
Q 017856 256 PYLIGSESHEDFSRTSIVI---------------PSAQVSKMHARISYK 289 (365)
Q Consensus 256 ~~~IGR~~~~~~~~~di~l---------------~~~~VSr~Ha~i~~~ 289 (365)
-+-|||+.+.. .|.++ ...+|||.-|+|.++
T Consensus 89 MFQIGRste~p---IDFvV~dt~~g~~~~~~~~~~~StISRfACRI~~d 134 (263)
T 3ega_A 89 MFQVGRSTESP---IDFVVTDTISGSQNTDEAQITQSTISRFACRIVCD 134 (263)
T ss_dssp EEEEESCCSTT---CSEECCCC----------CCCCCCSCSSCEEEEEE
T ss_pred hhhhcCCCCCC---CCeEEeccccccccCCcCCcccchhhheeEEEEec
Confidence 37799988742 45553 245799999999987
No 72
>2l52_A Methanosarcina acetivorans SAMP1 homolog; beta-grAsp fold, protein binding, E1-like, SAMP activator, ELSA, adenylation, ubiquitin; NMR {Methanosarcina acetivorans}
Probab=32.48 E-value=19 Score=27.10 Aligned_cols=30 Identities=13% Similarity=0.228 Sum_probs=19.9
Q ss_pred CCccceeeCCCCceeeec--CCCcEEeCCCCEEEECC
Q 017856 300 SEHGTYVTDNEGRRYRVS--SNFPARFRPSDTIEFGS 334 (365)
Q Consensus 300 S~nGT~vng~~~~~~~l~--~~~~~~L~~Gd~I~~G~ 334 (365)
|.+-..||++ .+. .+....|++||+|.|=.
T Consensus 63 ~~~~v~VNg~-----~v~~~~~~~~~L~~gD~V~i~p 94 (99)
T 2l52_A 63 GSINILINGN-----NIRHLEGLETLLKDSDEIGILP 94 (99)
T ss_dssp SSCEEEETTS-----CGGGTTSTTSCCCTTEEEEEEC
T ss_pred cccEEEECCE-----EccccCCCCCCCCCCCEEEEEC
Confidence 3345778886 442 14467899999998743
No 73
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=31.83 E-value=18 Score=24.75 Aligned_cols=14 Identities=21% Similarity=0.207 Sum_probs=11.1
Q ss_pred CcEEeCCCCEEEEC
Q 017856 320 FPARFRPSDTIEFG 333 (365)
Q Consensus 320 ~~~~L~~Gd~I~~G 333 (365)
....|++||.|.|=
T Consensus 45 ~~~~L~dgD~v~i~ 58 (64)
T 2cu3_A 45 PDRPLRDGDVVEVV 58 (64)
T ss_dssp CCCCCCTTCEEEEE
T ss_pred CCcCCCCCCEEEEE
Confidence 34689999999873
No 74
>2k9x_A Tburm1, uncharacterized protein; unknown function; NMR {Trypanosoma brucei}
Probab=31.75 E-value=20 Score=27.77 Aligned_cols=27 Identities=22% Similarity=0.271 Sum_probs=19.1
Q ss_pred ceeeCCCCceeeecCCCcEEeCCCCEEEEC
Q 017856 304 TYVTDNEGRRYRVSSNFPARFRPSDTIEFG 333 (365)
Q Consensus 304 T~vng~~~~~~~l~~~~~~~L~~Gd~I~~G 333 (365)
++|||++ ..+..+..++|++||.|.|=
T Consensus 70 VLVNg~d---~e~l~gldt~L~dgD~V~fi 96 (110)
T 2k9x_A 70 VLVNSCD---AEVVGGMDYVLNDGDTVEFI 96 (110)
T ss_dssp EEESSSB---HHHHTSSCCCCCSSCEEEEE
T ss_pred EEECCee---eeccCCcccCCCCcCEEEEe
Confidence 6788861 12225667899999999883
No 75
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=30.65 E-value=32 Score=24.15 Aligned_cols=25 Identities=16% Similarity=0.304 Sum_probs=17.2
Q ss_pred ceeeCCCCceeeecCCCcEEeCCCCEEEECC
Q 017856 304 TYVTDNEGRRYRVSSNFPARFRPSDTIEFGS 334 (365)
Q Consensus 304 T~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~ 334 (365)
..||++ .+. +....|++||+|.|=.
T Consensus 45 vavN~~-----~v~-~~~~~l~~gDeV~i~P 69 (74)
T 3rpf_C 45 IALNDH-----LID-NLNTPLKDGDVISLLP 69 (74)
T ss_dssp EEESSS-----EEC-CTTCCCCTTCEEEEEC
T ss_pred EEECCE-----EcC-CCCcCCCCCCEEEEEC
Confidence 556775 433 3467899999998743
No 76
>2q5w_D Molybdopterin converting factor, subunit 1; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_B*
Probab=27.88 E-value=34 Score=23.98 Aligned_cols=23 Identities=22% Similarity=0.313 Sum_probs=16.3
Q ss_pred ceeeCCCCceeeecCCCcEEeCCCCEEEEC
Q 017856 304 TYVTDNEGRRYRVSSNFPARFRPSDTIEFG 333 (365)
Q Consensus 304 T~vng~~~~~~~l~~~~~~~L~~Gd~I~~G 333 (365)
..|||+ .+.. ...|++||+|.|=
T Consensus 49 v~vNg~-----~v~~--~~~L~~gD~V~i~ 71 (77)
T 2q5w_D 49 VAVNEE-----FVQK--SDFIQPNDTVALI 71 (77)
T ss_dssp EEETTE-----EECT--TSEECTTCEEEEE
T ss_pred EEECCE-----ECCC--CCCcCCCCEEEEE
Confidence 566775 5543 3689999999873
No 77
>1wgk_A Riken cDNA 2900073H19 protein; THis domain, ubiqutin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.3.3 PDB: 1xo3_A
Probab=27.87 E-value=23 Score=27.65 Aligned_cols=26 Identities=15% Similarity=0.439 Sum_probs=18.6
Q ss_pred ceeeCCCCceeeecCCCcEEeCCCCEEEE
Q 017856 304 TYVTDNEGRRYRVSSNFPARFRPSDTIEF 332 (365)
Q Consensus 304 T~vng~~~~~~~l~~~~~~~L~~Gd~I~~ 332 (365)
.+||+++ +++..+..++|++||.|.|
T Consensus 76 VlVN~~d---i~~l~gldt~L~dGDeV~i 101 (114)
T 1wgk_A 76 VLINDAD---WELLGELDYQLQDQDSILF 101 (114)
T ss_dssp EEESSSB---HHHHCTTTCBCCSSEEEEE
T ss_pred EEECCee---eeccCCcCcCCCCCCEEEE
Confidence 7788861 1122466789999999988
No 78
>2g1e_A Hypothetical protein TA0895; MOAD, molybdopterin, transferase; NMR {Thermoplasma acidophilum} PDB: 2k22_A
Probab=25.75 E-value=36 Score=24.62 Aligned_cols=25 Identities=16% Similarity=0.357 Sum_probs=17.1
Q ss_pred ceeeCCCCceeeec--CCCcEEeCCCCEEEEC
Q 017856 304 TYVTDNEGRRYRVS--SNFPARFRPSDTIEFG 333 (365)
Q Consensus 304 T~vng~~~~~~~l~--~~~~~~L~~Gd~I~~G 333 (365)
..||++ .+. .+....|++||+|.|=
T Consensus 58 v~vN~~-----~v~~~~~~~~~l~~gD~V~i~ 84 (90)
T 2g1e_A 58 ILVNGN-----NITSMKGLDTEIKDDDKIDLF 84 (90)
T ss_dssp EEESSS-----BGGGTCSSSCBCCTTCEEEEE
T ss_pred EEECCE-----EccccCCCCcCCCCCCEEEEe
Confidence 566775 443 1346789999999873
No 79
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=24.05 E-value=41 Score=25.43 Aligned_cols=28 Identities=11% Similarity=0.145 Sum_probs=21.1
Q ss_pred CccceeeCCCCceeeecCCCcEEeCCCCEEEECCC
Q 017856 301 EHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD 335 (365)
Q Consensus 301 ~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~ 335 (365)
.+-..|||+ .+. ....|++||.|.+=..
T Consensus 58 ~~~V~Vng~-----~v~--~d~~L~dGDRVEIyrp 85 (97)
T 2hj1_A 58 TNKIGIFSR-----PIK--LTDVLKEGDRIEIYRP 85 (97)
T ss_dssp TSEEEEEEC-----SCC--TTCBCCTTCEEEECCC
T ss_pred ccEEEEcCE-----ECC--CCccCCCCCEEEEEec
Confidence 456788996 554 4578999999988654
No 80
>1ryj_A Unknown; beta/alpha protein, structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.15.3.2
Probab=23.26 E-value=45 Score=23.16 Aligned_cols=22 Identities=18% Similarity=0.120 Sum_probs=14.6
Q ss_pred ceeeCCCCceeeecCCCcEEeCCCCEEEE
Q 017856 304 TYVTDNEGRRYRVSSNFPARFRPSDTIEF 332 (365)
Q Consensus 304 T~vng~~~~~~~l~~~~~~~L~~Gd~I~~ 332 (365)
..+|+. .+.+. ..|++||.|.|
T Consensus 42 vavN~~-----~v~~~--~~L~~gD~V~i 63 (70)
T 1ryj_A 42 VKKNGQ-----IVIDE--EEIFDGDIIEV 63 (70)
T ss_dssp EEETTE-----ECCTT--SBCCTTCEEEE
T ss_pred EEECCE-----ECCCc--ccCCCCCEEEE
Confidence 445664 44433 38999999976
No 81
>3po0_A Small archaeal modifier protein 1; ubiquitin-like protein, protein binding; 1.55A {Haloferax volcanii} PDB: 2l83_A
Probab=23.09 E-value=38 Score=24.59 Aligned_cols=25 Identities=4% Similarity=-0.015 Sum_probs=17.4
Q ss_pred cceeeCCCCceeeecCCCcEEeCCCCEEEECC
Q 017856 303 GTYVTDNEGRRYRVSSNFPARFRPSDTIEFGS 334 (365)
Q Consensus 303 GT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~ 334 (365)
-.+||++ .+.. ..+|++||+|.|=.
T Consensus 60 ~v~VN~~-----~v~~--~~~l~~gDeV~i~P 84 (89)
T 3po0_A 60 NVLRNGE-----AAAL--GEATAAGDELALFP 84 (89)
T ss_dssp EEEETTE-----ECCT--TSBCCTTCEEEEEC
T ss_pred EEEECCE-----ECCC--CcccCCCCEEEEEC
Confidence 4667776 5543 46899999998743
No 82
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=22.96 E-value=36 Score=25.18 Aligned_cols=12 Identities=25% Similarity=0.340 Sum_probs=10.3
Q ss_pred cEEeCCCCEEEE
Q 017856 321 PARFRPSDTIEF 332 (365)
Q Consensus 321 ~~~L~~Gd~I~~ 332 (365)
...|++||.|.|
T Consensus 69 ~~~L~dGD~Vei 80 (87)
T 1tyg_B 69 EVELCDRDVIEI 80 (87)
T ss_dssp TSBCCSSSEEEE
T ss_pred CcCCCCCCEEEE
Confidence 468999999986
No 83
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=22.12 E-value=1.1e+02 Score=29.70 Aligned_cols=37 Identities=27% Similarity=0.387 Sum_probs=29.4
Q ss_pred cCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHh
Q 017856 62 GRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKA 101 (365)
Q Consensus 62 ~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~ 101 (365)
...+|+-+||+|....|-.|| .|++-+..+|+.|...
T Consensus 363 ~~~~IfAiGD~a~~~~p~~a~---~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 363 GSNNIFAIGDNAFAGLPPTAQ---VAHQEAEYLAKNFDKM 399 (502)
T ss_dssp TCSSEEECGGGEESSSCCCHH---HHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcccCCCCCCchH---HHHHHHHHHHHHHHHH
Confidence 357999999999887776665 5788888888888765
No 84
>3mml_A Allophanate hydrolase subunit 2; structural genomics, PSI-2, protein structure initiative, tuberculosis structural genomics consortium; 2.50A {Mycobacterium smegmatis}
Probab=21.50 E-value=1.2e+02 Score=28.10 Aligned_cols=32 Identities=13% Similarity=0.164 Sum_probs=26.4
Q ss_pred CCCccceeeCCCCceeeecCCCcEEeCCCCEEEECCC
Q 017856 299 QSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD 335 (365)
Q Consensus 299 ~S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~ 335 (365)
|..-...|||+ .+....++.++.||+++||..
T Consensus 78 GA~~~~~ldg~-----~v~~~~~~~v~~G~~L~~g~~ 109 (318)
T 3mml_A 78 GADTDPAVNGI-----PFGTNSIHHVHDGQVISLGAP 109 (318)
T ss_dssp ESCCCCEETTE-----ECCTTSCEEECTTCEEECCCC
T ss_pred CCCCcceECCE-----EcCCCeEEEECCCCEEEeCCC
Confidence 34445668888 888889999999999999985
No 85
>1vjk_A Molybdopterin converting factor, subunit 1; structural genomics, PSI, protein structure INI southeast collaboratory for structural genomics; 1.51A {Pyrococcus furiosus} SCOP: d.15.3.1
Probab=20.62 E-value=49 Score=24.61 Aligned_cols=23 Identities=17% Similarity=0.218 Sum_probs=17.0
Q ss_pred ceeeCCCCceeeecCCCcEEeCCCCEEEEC
Q 017856 304 TYVTDNEGRRYRVSSNFPARFRPSDTIEFG 333 (365)
Q Consensus 304 T~vng~~~~~~~l~~~~~~~L~~Gd~I~~G 333 (365)
.+||++ .+. ...+|++||+|.|=
T Consensus 70 v~VNg~-----~v~--~~~~L~dGDeV~i~ 92 (98)
T 1vjk_A 70 IAVNGR-----YVS--WDEELKDGDVVGVF 92 (98)
T ss_dssp EEETTB-----CCC--TTCBCCTTCEEEEE
T ss_pred EEECCE-----ECC--CCCCCCCCCEEEEE
Confidence 677876 454 25789999999874
No 86
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=20.17 E-value=30 Score=24.54 Aligned_cols=25 Identities=16% Similarity=0.077 Sum_probs=16.7
Q ss_pred ceeeCCCCceeeecCC--CcEEeCCCCEEEEC
Q 017856 304 TYVTDNEGRRYRVSSN--FPARFRPSDTIEFG 333 (365)
Q Consensus 304 T~vng~~~~~~~l~~~--~~~~L~~Gd~I~~G 333 (365)
+.+||. -+++. ....|++||.|.+=
T Consensus 33 V~vNg~-----iVpr~~~~~~~L~dGD~veIv 59 (73)
T 2kl0_A 33 VALNYD-----VVPRGKWDETPVTAGDEIEIL 59 (73)
T ss_dssp EEESSS-----EECHHHHTTCBCCTTCEEEEE
T ss_pred EEECCE-----ECChHHcCcccCCCCCEEEEE
Confidence 556775 44432 24689999999873
Done!