Query 017856
Match_columns 365
No_of_seqs 456 out of 3286
Neff 7.8
Searched_HMMs 13730
Date Mon Mar 25 06:02:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017856.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017856hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1uhta_ b.26.1.2 (A:) FHA doma 99.8 2.6E-21 1.9E-25 156.6 11.4 92 244-350 25-116 (118)
2 d2ff4a3 b.26.1.2 (A:284-382) P 99.8 2E-21 1.4E-25 152.5 10.3 92 230-344 6-97 (99)
3 d1mzka_ b.26.1.2 (A:) Kinase a 99.8 2E-20 1.4E-24 152.3 13.7 107 228-345 2-120 (122)
4 d2piea1 b.26.1.2 (A:13-139) Ub 99.8 4.2E-20 3.1E-24 150.8 11.2 102 228-345 3-113 (127)
5 d2affa1 b.26.1.2 (A:3-100) Ant 99.8 1.4E-19 1.1E-23 141.5 10.0 94 230-344 4-97 (98)
6 d1gxca_ b.26.1.2 (A:) Chk2 kin 99.7 6.2E-18 4.5E-22 136.1 11.7 94 232-343 4-111 (116)
7 d1lgpa_ b.26.1.2 (A:) Cell cyc 99.7 3.5E-18 2.6E-22 136.9 8.6 99 232-345 6-111 (113)
8 d2brfa1 b.26.1.2 (A:8-108) Pol 99.7 8.6E-18 6.3E-22 131.7 10.0 76 254-343 21-98 (101)
9 d1g6ga_ b.26.1.2 (A:) Phosphot 99.7 5.6E-18 4E-22 138.5 8.7 81 254-344 35-119 (127)
10 d1dmza_ b.26.1.2 (A:) Phosphot 99.7 7.8E-17 5.6E-21 136.4 11.2 100 232-345 7-125 (158)
11 d1wlna1 b.26.1.2 (A:8-114) Afa 99.6 3E-16 2.2E-20 124.2 10.3 84 244-343 22-105 (107)
12 d2g1la1 b.26.1.2 (A:498-599) K 99.6 2E-15 1.4E-19 118.4 10.6 79 246-343 19-101 (102)
13 d1pn0a1 c.3.1.2 (A:1-240,A:342 99.6 4.6E-16 3.3E-20 145.9 7.8 79 59-144 243-322 (360)
14 d3c96a1 c.3.1.2 (A:4-182,A:294 99.2 8.2E-12 6E-16 112.3 9.6 75 59-143 184-258 (288)
15 d2voua1 c.3.1.2 (A:2-163,A:292 97.7 5.1E-05 3.7E-09 66.3 9.2 73 61-143 167-239 (265)
16 d1k0ia1 c.3.1.2 (A:1-173,A:276 97.4 6.4E-05 4.7E-09 66.9 5.8 78 59-144 172-249 (292)
17 d1b5qa1 c.3.1.2 (A:5-293,A:406 97.3 7E-05 5.1E-09 63.7 4.7 41 60-100 303-344 (347)
18 d2gmha1 c.3.1.2 (A:4-236,A:336 95.7 0.0025 1.8E-07 59.3 3.6 67 58-126 239-305 (380)
19 d3c96a2 d.16.1.2 (A:183-293) M 95.0 0.02 1.5E-06 43.4 6.0 52 1-54 51-111 (111)
20 d2ivda1 c.3.1.2 (A:10-306,A:41 64.6 1.3 9.5E-05 36.7 2.1 69 22-98 277-345 (347)
21 d1dm9a_ d.66.1.3 (A:) Heat sho 33.4 14 0.001 26.5 3.1 38 302-347 30-67 (104)
22 d1z2la2 d.58.19.1 (A:213-329) 29.9 19 0.0014 25.7 3.4 35 65-101 7-42 (117)
23 d1d7ya1 c.3.1.5 (A:5-115,A:237 27.5 22 0.0016 27.1 3.6 36 63-98 140-180 (183)
24 d1tu2b2 b.84.2.2 (B:170-235) C 26.9 41 0.003 21.9 4.2 52 278-335 6-61 (66)
25 d1hcza2 b.84.2.2 (A:168-230) C 24.0 46 0.0034 21.4 4.0 53 277-335 6-59 (63)
26 d1tygb_ d.15.3.2 (B:) Thiamin 23.8 16 0.0012 23.6 1.7 24 301-332 36-59 (65)
27 d2cu3a1 d.15.3.2 (A:1-63) Unch 23.5 19 0.0014 23.2 2.0 24 301-332 34-57 (63)
28 d1xhca1 c.3.1.5 (A:1-103,A:226 22.1 35 0.0026 25.2 3.8 36 62-98 129-164 (167)
29 d1hh2p1 b.40.4.5 (P:127-198) S 20.5 51 0.0037 21.6 3.8 39 285-331 15-53 (72)
No 1
>d1uhta_ b.26.1.2 (A:) FHA domain containing protein At4G14490 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.85 E-value=2.6e-21 Score=156.62 Aligned_cols=92 Identities=21% Similarity=0.310 Sum_probs=78.0
Q ss_pred ccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEECCEEEEEEcCCCccceeeCCCCceeeecCCCcEE
Q 017856 244 QPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPAR 323 (365)
Q Consensus 244 ~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT~vng~~~~~~~l~~~~~~~ 323 (365)
+.+.|. . +..++|||.... |||+++++.|||+||+|.++++.|+|+|++|+|||||||. +|.++.+++
T Consensus 25 ~~~~l~-~--~~~~~iGR~~~~----~di~l~d~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT~vng~-----~l~~~~~~~ 92 (118)
T d1uhta_ 25 DALDYK-P--GSTIRVGRIVRG----NEIAIKDAGISTKHLRIESDSGNWVIQDLGSSNGTLLNSN-----ALDPETSVN 92 (118)
T ss_dssp CBCCBC-T--TCCEEEESSSTT----CSEECCSSSSCTTCEEEEECSSSEEEECCCCSSCCEESSS-----BCCTTCEEE
T ss_pred cEEEeC-C--CCEEEECCCCcC----CeEEeCccCcchheeEEEEECCEEEEEECCCcceeEECCE-----EcCCCcEEE
Confidence 778886 2 345899997533 9999999999999999999999999999999999999999 999899999
Q ss_pred eCCCCEEEECCCceeEEEEEEecCCCC
Q 017856 324 FRPSDTIEFGSDKKAIFRVKVIGTPPN 350 (365)
Q Consensus 324 L~~Gd~I~~G~~~~~~f~~~~~~~~p~ 350 (365)
|++||+|+||.. .|.+....+.|.
T Consensus 93 L~~Gd~i~lG~~---~~~~v~~~~~p~ 116 (118)
T d1uhta_ 93 LGDGDVIKLGEY---TSILVNFVSGPS 116 (118)
T ss_dssp CCTTEEEEETTT---EEEEEEEECSSC
T ss_pred CCCCCEEEECCE---EEEEEEecCCCC
Confidence 999999999998 444444334443
No 2
>d2ff4a3 b.26.1.2 (A:284-382) Probable regulatory protein EmbR, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.85 E-value=2e-21 Score=152.50 Aligned_cols=92 Identities=25% Similarity=0.308 Sum_probs=79.9
Q ss_pred cEEEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEECCEEEEEEcCCCccceeeCC
Q 017856 230 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDN 309 (365)
Q Consensus 230 ~w~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT~vng~ 309 (365)
-++|.....+ +.++|. ...++|||.++ |||+++++.|||.||.|.++++.|+|+|++|+|||||||.
T Consensus 6 ~~~l~~~~~G----~~~~l~----~~~~~IGR~~~-----~di~l~d~~VSr~Ha~i~~~~~~~~i~Dl~S~nGt~vNg~ 72 (99)
T d2ff4a3 6 VAYLHDIASG----RGYPLQ----AAATRIGRLHD-----NDIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHE 72 (99)
T ss_dssp CCEEEETTTC----CEEECC----SSEEEEESSTT-----SSEECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTE
T ss_pred EEEEEcCCCC----CEEEEC----CCCEEEeeCcC-----CCEEECCccccceeEEEEEeCCEEEEEECCCcCCCeECCE
Confidence 4566665543 789998 55699999998 9999999999999999999999999999999999999998
Q ss_pred CCceeeecCCCcEEeCCCCEEEECCCceeEEEEEE
Q 017856 310 EGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 344 (365)
Q Consensus 310 ~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~~ 344 (365)
++. .++.|++||+|+||+. .|+|++
T Consensus 73 -----~i~--~~~~L~~Gd~i~iG~~---~~~f~~ 97 (99)
T d2ff4a3 73 -----RIR--SAVTLNDGDHIRICDH---EFTFQI 97 (99)
T ss_dssp -----ECS--SEEEECTTCEEEETTE---EEEEEC
T ss_pred -----EcC--CceECCCCCEEEECCE---EEEEEE
Confidence 885 4689999999999998 566654
No 3
>d1mzka_ b.26.1.2 (A:) Kinase associated protein phosphatase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.83 E-value=2e-20 Score=152.33 Aligned_cols=107 Identities=21% Similarity=0.373 Sum_probs=86.5
Q ss_pred CCcEEEEEcCCCCCccccEEEeecCC--CCCEEEcCCCCCCCCcceEEeCCccccccceEEEEE--CCEEEEEEcCCCcc
Q 017856 228 NGEWFLVPSGSENVVSQPIYLSVSHE--NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHG 303 (365)
Q Consensus 228 ~~~w~l~~~~~~~~~~~~i~l~~~~~--~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~--~~~~~i~Dl~S~nG 303 (365)
...|+++..-.+...+..+.+. ... ..+++|||.++ |||+++|+.|||.||.|.++ ++.|+|+|++|+||
T Consensus 2 g~~~l~L~vi~Gp~~g~~~~l~-~~~~~~~~~~IGR~~~-----~di~l~d~~vSr~Ha~i~~~~~~~~~~v~DlgS~nG 75 (122)
T d1mzka_ 2 GSSWLFLEVIAGPAIGLQHAVN-STSSSKLPVKLGRVSP-----SDLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNG 75 (122)
T ss_dssp CSEEEEEEECSSTTCSCEEEEC-TTCSTTCSEEEESSSS-----CSEECCCTTSSSEEEEEEEETTTTEEEEEETTCSSC
T ss_pred CCceEEEEEEECCCCCcEEEec-CCCCCcCCEEecCCCC-----CCEEECCCCcCccceEEEEeCCCCEEEEeeCCCCCc
Confidence 3568777766555555677775 222 34589999998 99999999999999999997 46899999999999
Q ss_pred ceeeCCCCceeee--------cCCCcEEeCCCCEEEECCCceeEEEEEEe
Q 017856 304 TYVTDNEGRRYRV--------SSNFPARFRPSDTIEFGSDKKAIFRVKVI 345 (365)
Q Consensus 304 T~vng~~~~~~~l--------~~~~~~~L~~Gd~I~~G~~~~~~f~~~~~ 345 (365)
|||||. +| .++.+++|++||+|+||..+.+.+++...
T Consensus 76 T~vNg~-----~i~~~~~~~~~~g~~~~L~~gd~i~iG~~~~~~v~~~~~ 120 (122)
T d1mzka_ 76 TLVNSH-----SISHPDLGSRKWGNPVELASDDIITLGTTTKVYVRISSQ 120 (122)
T ss_dssp CEETTE-----ESSCCCTTTCCCCCCEECCTTEEEECSSSCEEEEEEEEC
T ss_pred eEECCE-----ECcccccccccCCceEEcCCCCEEEECCeEEEEEEEecC
Confidence 999998 66 45678999999999999997666666554
No 4
>d2piea1 b.26.1.2 (A:13-139) Ubiquitin ligase protein RNF8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.81 E-value=4.2e-20 Score=150.82 Aligned_cols=102 Identities=18% Similarity=0.299 Sum_probs=85.2
Q ss_pred CCcEEEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCcc----ccccceEEEEE-CCEEEEEEcCCCc
Q 017856 228 NGEWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQ----VSKMHARISYK-DGAFYLIDLQSEH 302 (365)
Q Consensus 228 ~~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~----VSr~Ha~i~~~-~~~~~i~Dl~S~n 302 (365)
...|+|...+... ..+.|. .+..++|||..+ |+++++++. |||.||+|.++ ++.|+|+|++|+|
T Consensus 3 ~~~w~L~r~g~~~---~~~~l~---~~~~~tiGR~~~-----~~~~l~~~~~~~~VSR~Ha~i~~~~~g~~~l~D~~S~N 71 (127)
T d2piea1 3 GRSWCLRRVGMSA---GWLLLE---DGCEVTVGRGFG-----VTYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKSLN 71 (127)
T ss_dssp CEEEEEEETTCSS---CBEEEC---TTCCEEEESSSS-----SSEECCCSSCTTSSCSSCEEEEECTTSCEEEEECSCSS
T ss_pred CceEEEEEccCCC---CeEEcC---CCCEEEeccCCC-----ccEEECCCCcccccchhheEEEECCCCeEEEEECCCcC
Confidence 4579999987653 456665 255699999998 999998775 99999999997 6789999999999
Q ss_pred cceeeCCCCceeeecCCCcEEeCCCCEEEECC----CceeEEEEEEe
Q 017856 303 GTYVTDNEGRRYRVSSNFPARFRPSDTIEFGS----DKKAIFRVKVI 345 (365)
Q Consensus 303 GT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~----~~~~~f~~~~~ 345 (365)
||||||. +|.++.++.|++||+|+||. ...+.|.+++.
T Consensus 72 Gt~lNg~-----~l~~~~~~~L~~GD~I~iG~p~~~~~~~~f~~~~~ 113 (127)
T d2piea1 72 GVWLNRA-----RLEPLRVYSIHQGDYIQLGVPLENKENAEYEYEVT 113 (127)
T ss_dssp CEEETTE-----ECCTTCCEECCTTCEEEESCCCTTCSSCSEEEEEE
T ss_pred CeEECCE-----EccCCceeEcCCCCEEEeCCCCCCCcceEEEEEeC
Confidence 9999999 99999999999999999994 33445777664
No 5
>d2affa1 b.26.1.2 (A:3-100) Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=1.4e-19 Score=141.52 Aligned_cols=94 Identities=22% Similarity=0.265 Sum_probs=80.0
Q ss_pred cEEEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEECCEEEEEEcCCCccceeeCC
Q 017856 230 EWFLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDN 309 (365)
Q Consensus 230 ~w~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT~vng~ 309 (365)
+++++..+... ++.++|. ...++|||++. |||+++++.||+.||.|.++++.|+|+|++|+|||||||.
T Consensus 4 ~~i~i~~~g~~--g~~~~L~----~~~~~IGr~~~-----~di~l~~~~is~~Ha~i~~~~~~~~i~d~~s~ng~~vNg~ 72 (98)
T d2affa1 4 RLVTIKRSGVD--GPHFPLS----LSTCLFGRGIE-----CDIRIQLPVVSKQHCKIEIHEQEAILHNFSSTNPTQVNGS 72 (98)
T ss_dssp EEEEECTTSCE--EEEEECC----SSEEEEESSTT-----SSEEECCTTSCSSBEEEEECSSCEEEEECCSSSCCEETTE
T ss_pred EEEEEEcCCCC--ceEEEEC----CCCEEEeeCCC-----CCEEeCCCCcCceeEEEEEeCCEEEEEECCCcccceECCE
Confidence 34444444443 4889998 55699999999 9999999999999999999999999999999999999998
Q ss_pred CCceeeecCCCcEEeCCCCEEEECCCceeEEEEEE
Q 017856 310 EGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKV 344 (365)
Q Consensus 310 ~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~~ 344 (365)
++. .+++|++||+|+||+. .|+|+.
T Consensus 73 -----~l~--~~~~L~~Gd~I~iG~~---~~~fe~ 97 (98)
T d2affa1 73 -----VID--EPVRLKHGDVITIIDR---SFRYEN 97 (98)
T ss_dssp -----ECS--SCEEECTTCEEEETTE---EEEEEE
T ss_pred -----ECC--CceECCCCCEEEECCE---EEEEEe
Confidence 874 4689999999999988 677753
No 6
>d1gxca_ b.26.1.2 (A:) Chk2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=6.2e-18 Score=136.12 Aligned_cols=94 Identities=19% Similarity=0.217 Sum_probs=77.9
Q ss_pred EEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCc---------cccccceEEEEE-----CCEEEEEE
Q 017856 232 FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSA---------QVSKMHARISYK-----DGAFYLID 297 (365)
Q Consensus 232 ~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~---------~VSr~Ha~i~~~-----~~~~~i~D 297 (365)
-|++.+.. ...+.|. +..++|||++. ||++++++ .|||.||+|.++ ++.++|.|
T Consensus 4 rL~~~~~~---~~~~~L~----~~~~~iGR~~~-----cdi~l~~~~~~~~~~~~~ISr~H~~I~~~~~~~~~~~~~i~d 71 (116)
T d1gxca_ 4 RLWALQDG---FANLECV----NDNYWFGRDKS-----CEYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAYIED 71 (116)
T ss_dssp EEEECSTT---CCCEEEC----SSEEEEESSTT-----CSEECCCGGGGGSSGGGGSCTTCEEEEEEECTTSSEEEEEEE
T ss_pred EEEecCCC---CceEEeC----CCCEEeeeCCC-----CCeEecCCccccccccceEecceEEEEEecccCCCCEEEEEC
Confidence 56676654 2679998 45599999998 99999886 699999999886 22367777
Q ss_pred cCCCccceeeCCCCceeeecCCCcEEeCCCCEEEECCCceeEEEEE
Q 017856 298 LQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVK 343 (365)
Q Consensus 298 l~S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~ 343 (365)
+ |+|||||||. +|.++.++.|++||+|+||......|.|.
T Consensus 72 ~-S~NGT~vN~~-----~i~~~~~~~L~~gD~I~ig~~~~~~f~f~ 111 (116)
T d1gxca_ 72 H-SGNGTFVNTE-----LVGKGKRRPLNNNSEIALSLSRNKVFVFF 111 (116)
T ss_dssp C-CSSCEEETTE-----ECCTTCEEECCTTEEEEESSTTCEEEEEE
T ss_pred C-CccCceECCE-----EcCCCCEEECCCCCEEEECCCEeEEEEEE
Confidence 5 9999999999 99999999999999999999866567665
No 7
>d1lgpa_ b.26.1.2 (A:) Cell cycle checkpoint protein Chfr {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=3.5e-18 Score=136.94 Aligned_cols=99 Identities=18% Similarity=0.256 Sum_probs=76.4
Q ss_pred EEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeC-CccccccceEEEEE-CCEEEEEEcCCCccceeeCC
Q 017856 232 FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIP-SAQVSKMHARISYK-DGAFYLIDLQSEHGTYVTDN 309 (365)
Q Consensus 232 ~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~-~~~VSr~Ha~i~~~-~~~~~i~Dl~S~nGT~vng~ 309 (365)
.|+..+... ....+.+. +..++|||.+. ||+++. ++.|||.||+|.++ ++.+++.|.+|+|||||||.
T Consensus 6 ~Li~~~~~~-~~~~~~l~----~~~~~iGR~~~-----~di~l~d~~~iSr~Ha~I~~~~~~~~~~~~d~S~nGT~vNg~ 75 (113)
T d1lgpa_ 6 RLLRLGAEE-GEPHVLLR----KREWTIGRRRG-----CDLSFPSNKLVSGDHCRIVVDEKSGQVTLEDTSTSGTVINKL 75 (113)
T ss_dssp EECCTTCCS-SSCCEEEC----SSEEEEESSTT-----SSEECTTCTTSCTTCEEEEECTTTCCEEEEECSSSCCCCCCC
T ss_pred EEEEECCCC-CceEEEeC----CCCEeeCCCCC-----CCeEecCCCCcChHHeEEEEccceeeEEecCCCceeeEECCE
Confidence 444444332 23567787 55699999998 999996 57999999999997 45555555579999999999
Q ss_pred CCceeeecCCCcEEeCCCCEEEECCC-----ceeEEEEEEe
Q 017856 310 EGRRYRVSSNFPARFRPSDTIEFGSD-----KKAIFRVKVI 345 (365)
Q Consensus 310 ~~~~~~l~~~~~~~L~~Gd~I~~G~~-----~~~~f~~~~~ 345 (365)
+|.++.++.|++||+|+|+.. ..+.|+|+..
T Consensus 76 -----~i~~~~~~~L~~GD~I~i~~~~~~~~~~~~f~~e~~ 111 (113)
T d1lgpa_ 76 -----KVVKKQTCPLQTGDVIYLVYRKNEPEHNVAYLYESL 111 (113)
T ss_dssp -----CCCCSSCCCCCTTCEEEEECCSSCGGGCEEEECCCS
T ss_pred -----EcCCCceEECCCCCEEEEeecCCCccccEEEEEEcc
Confidence 999999999999999999853 2346666543
No 8
>d2brfa1 b.26.1.2 (A:8-108) Polynucleotide kinase 3'-phosphatase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=8.6e-18 Score=131.74 Aligned_cols=76 Identities=8% Similarity=0.161 Sum_probs=62.4
Q ss_pred CCCEEEcCCCCCCCCcceEEeCCccccccceEEEEE--CCEEEEEEcCCCccceeeCCCCceeeecCCCcEEeCCCCEEE
Q 017856 254 NEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK--DGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIE 331 (365)
Q Consensus 254 ~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~--~~~~~i~Dl~S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~ 331 (365)
+..++|||+++ |+ |.++.|||+||+|.++ ++.|++.|+ |+|||||||. +|.++.++.|++||+|+
T Consensus 21 ~~~~~iGR~~~-----~~--i~d~~vSr~Ha~i~~~~~~~~~~v~~~-s~Ngt~vNg~-----~l~~~~~~~L~~GD~i~ 87 (101)
T d2brfa1 21 GQALVLGRGPL-----TQ--VTDRKCSRTQVELVADPETRTVAVKQL-GVNPSTTGTQ-----ELKPGLEGSLGVGDTLY 87 (101)
T ss_dssp TCCEEECSBTT-----TT--BCCTTSCSSCEEEEEETTTTEEEEEEC-SSSCCEEC-C-----BCCTTCEEEEETTCEEE
T ss_pred CCeEEcccCcc-----cc--ccCCCcChhheEEEeccCceeEEEEcC-CCcceEEEEE-----EeccceeeECCCCCEEE
Confidence 45699999877 66 4689999999999987 555677776 8899999999 99999999999999999
Q ss_pred ECCCceeEEEEE
Q 017856 332 FGSDKKAIFRVK 343 (365)
Q Consensus 332 ~G~~~~~~f~~~ 343 (365)
||+. ...|.++
T Consensus 88 l~~~-~~~y~v~ 98 (101)
T d2brfa1 88 LVNG-LHPLTLR 98 (101)
T ss_dssp EETT-EEEEEEE
T ss_pred EcCC-eEEEEEE
Confidence 9988 2244444
No 9
>d1g6ga_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.72 E-value=5.6e-18 Score=138.50 Aligned_cols=81 Identities=16% Similarity=0.256 Sum_probs=69.6
Q ss_pred CCCEEEcCCCCCCCCcceEEeCC-ccccccceEEEEECCEEEEEEcCCCccceeeCCCCceeeecCCCcEEeCCCCEEEE
Q 017856 254 NEPYLIGSESHEDFSRTSIVIPS-AQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEF 332 (365)
Q Consensus 254 ~~~~~IGR~~~~~~~~~di~l~~-~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~ 332 (365)
...++|||++. ||+++.+ +.|||+||+|.++++.+++.|++|+|||||||. ++.++.+++|++||+|+|
T Consensus 35 ~~~~~iGR~~~-----~d~~l~d~~~VSr~Ha~i~~~~~~~~~~d~~S~NGT~vNg~-----~l~~~~~~~L~~GD~I~i 104 (127)
T d1g6ga_ 35 KKVWTFGRNPA-----CDYHLGNISRLSNKHFQILLGEDGNLLLNDISTNGTWLNGQ-----KVEKNSNQLLSQGDEITV 104 (127)
T ss_dssp CEEEEEESSTT-----SSEECCSCTTSCSSCEEEEECTTSCEEEEECCSSCCEETTE-----ECCTTCCEECCTTCEEEE
T ss_pred CccEEEccCcc-----cCccCCCcchhhHHHHHeeecccEEEEEECCCcceeEECCE-----EecCCCEEEcCCCCEEEE
Confidence 44589999998 9999975 799999999999987788888899999999999 999999999999999999
Q ss_pred CCCc---eeEEEEEE
Q 017856 333 GSDK---KAIFRVKV 344 (365)
Q Consensus 333 G~~~---~~~f~~~~ 344 (365)
|... .+.|.+.+
T Consensus 105 G~~~~~~~v~~~~~~ 119 (127)
T d1g6ga_ 105 GVGVESDILSLVIFI 119 (127)
T ss_dssp CTTSGGGCEEEEEEE
T ss_pred CCCCCCceEEEEEEE
Confidence 9642 34455544
No 10
>d1dmza_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.68 E-value=7.8e-17 Score=136.36 Aligned_cols=100 Identities=18% Similarity=0.294 Sum_probs=79.9
Q ss_pred EEEEcCCCCCccccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEEC---------------CEEEEE
Q 017856 232 FLVPSGSENVVSQPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKD---------------GAFYLI 296 (365)
Q Consensus 232 ~l~~~~~~~~~~~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~---------------~~~~i~ 296 (365)
.|.|..+. ...+.+.|. .+ ..+++|||++. ||++++++.|||.||.|.++. +.++|.
T Consensus 7 ~L~~l~~~-~~~~~i~i~-~~-~~~~~iGR~~~-----~d~~i~~~~vS~~H~~I~~~~~~~~~~~~~~~~~~~~~~~l~ 78 (158)
T d1dmza_ 7 TLKPLPDS-IIQESLEIQ-QG-VNPFFIGRSED-----CNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYC 78 (158)
T ss_dssp EEEECTTS-SCCCCEEET-TS-CSCEEEESSTT-----SSEECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEEEEE
T ss_pred EEEEccCC-CcceeEEEc-cC-CCcEEecCCcC-----ccEEECCCcccCcceEEEEeccccccccccccccCCCcEEEE
Confidence 45555533 334888887 21 24699999988 999999999999999998862 468999
Q ss_pred EcCCCccceeeCCCCceeeecCCCcEEeCCCCEEEECCC----ceeEEEEEEe
Q 017856 297 DLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD----KKAIFRVKVI 345 (365)
Q Consensus 297 Dl~S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~----~~~~f~~~~~ 345 (365)
|+ |+|||||||. +|.++.++.|++||+|.||.. ..+.|++...
T Consensus 79 D~-S~NGt~vN~~-----~~~~~~~~~l~~gD~i~~~~~~~~~~~i~f~~~~~ 125 (158)
T d1dmza_ 79 HT-GTNVSYLNNN-----RMIQGTKFLLQDGDEIKIIWDKNNKFVIGFKVEIN 125 (158)
T ss_dssp EC-STTCCEETTE-----ECCSSEEEECCSSCCEESCCCTTTTCCCCEEEECS
T ss_pred ec-CCCCeEECCE-----EcCCCceEECCCCCEEEEccCCCcceEEEEEEEec
Confidence 98 9999999999 999999999999999999842 2345666654
No 11
>d1wlna1 b.26.1.2 (A:8-114) Afadin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.65 E-value=3e-16 Score=124.19 Aligned_cols=84 Identities=19% Similarity=0.328 Sum_probs=70.6
Q ss_pred ccEEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEECCEEEEEEcCCCccceeeCCCCceeeecCCCcEE
Q 017856 244 QPIYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPAR 323 (365)
Q Consensus 244 ~~i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~~~~~~i~Dl~S~nGT~vng~~~~~~~l~~~~~~~ 323 (365)
..+.|. .+.++|||.... .|||+|.++.||++||+|.++++.++|+|++|+|||||||+ ++. +++.
T Consensus 22 ~~~~l~----~~~~~iG~~rs~---~~dI~L~~~~Vs~~Ha~i~~~~~~~~l~d~~s~~gt~vng~-----~v~--~~~~ 87 (107)
T d1wlna1 22 KLYRLQ----LSVTEVGTEKFD---DNSIQLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVDGQ-----RIS--ETTM 87 (107)
T ss_dssp CEEECC----SEEEECSSSCCS---TTCCCCCCTTCCSSCEEEEESSSCEEEEESCSSSCEEETSC-----BCS--SCEE
T ss_pred EEEEEC----CCCEEECCCCCC---CCcEEECCcceeeeEEEEEEcccccEEecCCCCcceEEccc-----ccc--ceeE
Confidence 445677 455999975321 19999999999999999999999999999999999999999 875 4689
Q ss_pred eCCCCEEEECCCceeEEEEE
Q 017856 324 FRPSDTIEFGSDKKAIFRVK 343 (365)
Q Consensus 324 L~~Gd~I~~G~~~~~~f~~~ 343 (365)
|++||+|+||... .|+|.
T Consensus 88 L~~gd~i~iG~~~--~Frf~ 105 (107)
T d1wlna1 88 LQSGMRLQFGTSH--VFKFV 105 (107)
T ss_dssp ECTTCEEEETTTE--EEEEE
T ss_pred CCCCCEEEECCce--EEEEe
Confidence 9999999999882 47764
No 12
>d2g1la1 b.26.1.2 (A:498-599) Kinesin-like protein kif1c {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.60 E-value=2e-15 Score=118.44 Aligned_cols=79 Identities=15% Similarity=0.260 Sum_probs=67.2
Q ss_pred EEEeecCCCCCEEEcCCCCCCCCcceEEeCCccccccceEEEEE----CCEEEEEEcCCCccceeeCCCCceeeecCCCc
Q 017856 246 IYLSVSHENEPYLIGSESHEDFSRTSIVIPSAQVSKMHARISYK----DGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFP 321 (365)
Q Consensus 246 i~l~~~~~~~~~~IGR~~~~~~~~~di~l~~~~VSr~Ha~i~~~----~~~~~i~Dl~S~nGT~vng~~~~~~~l~~~~~ 321 (365)
+.|. ...++|||. . |||++.++.||++||+|.+. +..+++.|++|+|||||||. +|. ++
T Consensus 19 y~l~----~~~~~iGr~-~-----~dI~l~~~~vs~~Ha~i~~~~~~~~~~~~i~d~~s~~gt~VNg~-----~i~--~~ 81 (102)
T d2g1la1 19 YHIK----DGVTRVGQV-D-----MDIKLTGQFIREQHCLFRSIPQPDGEVVVTLEPCEGAETYVNGK-----LVT--EP 81 (102)
T ss_dssp EECC----SEEEEEESS-S-----CSEECCCTTCCSEEEEEEEEECTTSCEEEEEEECTTCCEEETTE-----ECC--SC
T ss_pred EEcC----CCcEECCCC-C-----cCEEecccceeeeeeEEEEEEcCCCcEEEEecCCCCCCeEECCe-----Ecc--ce
Confidence 5566 555999994 5 99999999999999999875 34699999999999999998 885 57
Q ss_pred EEeCCCCEEEECCCceeEEEEE
Q 017856 322 ARFRPSDTIEFGSDKKAIFRVK 343 (365)
Q Consensus 322 ~~L~~Gd~I~~G~~~~~~f~~~ 343 (365)
+.|++||+|.||... .|+|.
T Consensus 82 ~~L~~gD~I~~G~~~--~frf~ 101 (102)
T d2g1la1 82 LVLKSGNRIVMGKNH--VFRFN 101 (102)
T ss_dssp EECCTTCEEEETTTE--EEEEE
T ss_pred eEcCCCCEEEECCCE--EEEEc
Confidence 999999999999973 47764
No 13
>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}
Probab=99.60 E-value=4.6e-16 Score=145.93 Aligned_cols=79 Identities=24% Similarity=0.314 Sum_probs=68.6
Q ss_pred CCcc-CCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 59 FTWG-RGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLAR 137 (365)
Q Consensus 59 ~~w~-~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~ 137 (365)
.+|. .|||+|+|||||+|+|+.|||+|+||+||..|+++|....+. ...+.+|++|+++|++++..++..++
T Consensus 243 ~~~~~~grv~LvGDAAH~~~P~~GqG~n~al~Da~~La~~l~~~~~~-------~~~~~~L~~Y~~~R~~~~~~~~~~s~ 315 (360)
T d1pn0a1 243 EKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTG-------RAKRDILKTYEEERQPFAQALIDFDH 315 (360)
T ss_dssp SCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTT-------CBCGGGGHHHHHHHHHHHHHHHHHHH
T ss_pred hheeecCcEEEccCcccccccccCCCCcccHHHHHHHHHHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4565 589999999999999999999999999999999999887542 22367899999999999999999999
Q ss_pred HHHHHHh
Q 017856 138 SAAVMAS 144 (365)
Q Consensus 138 ~~~~~~~ 144 (365)
...++++
T Consensus 316 ~~~~~~~ 322 (360)
T d1pn0a1 316 QFSRLFS 322 (360)
T ss_dssp HHHHHHH
T ss_pred HHHHHHC
Confidence 8777764
No 14
>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.24 E-value=8.2e-12 Score=112.32 Aligned_cols=75 Identities=41% Similarity=0.608 Sum_probs=67.3
Q ss_pred CCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 59 FTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 138 (365)
Q Consensus 59 ~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~ 138 (365)
..|..++++++|||+|+++|+.|||+|++|+|+..|+++|.+. .+...+|+.|++.|++++..++..++.
T Consensus 184 ~~~~~~~~~~~gda~h~~~p~~g~G~~~ai~d~~~l~~~l~~~----------~~~~~al~~y~~~r~pr~~~~~~~~~~ 253 (288)
T d3c96a1 184 PHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARN----------ADVAAALREYEEARRPTANKIILANRE 253 (288)
T ss_dssp SCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC----------SSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCcceecccccceeCCccccchhhhhhhHHHHHHHHhhC----------CCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678899999999999999999999999999999999999763 467899999999999999999999887
Q ss_pred HHHHH
Q 017856 139 AAVMA 143 (365)
Q Consensus 139 ~~~~~ 143 (365)
.....
T Consensus 254 ~~~~~ 258 (288)
T d3c96a1 254 REKEE 258 (288)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 66554
No 15
>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}
Probab=97.71 E-value=5.1e-05 Score=66.27 Aligned_cols=73 Identities=26% Similarity=0.330 Sum_probs=63.4
Q ss_pred ccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 61 WGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARSAA 140 (365)
Q Consensus 61 w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~~~ 140 (365)
+....+.+.||++|.+.|+.++|.+++++|+..|+..+... .+....|+.|+..|.++.+.++..++..+
T Consensus 167 ~~~~~~~~~~~~a~~~~p~~~~g~~~~~~d~~~l~~~l~~~----------~~~~~~l~~~~~~r~~~~~~~~~~~r~~g 236 (265)
T d2voua1 167 MVHGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTKN----------HDLRGSLQSWETRQLQQGHAYLNKVKKMA 236 (265)
T ss_dssp SEETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHHC----------SCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccceeeeccHHHHHHHHhhc----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44578999999999999999999999999999999998763 35678999999999999999988887665
Q ss_pred HHH
Q 017856 141 VMA 143 (365)
Q Consensus 141 ~~~ 143 (365)
.+.
T Consensus 237 ~~~ 239 (265)
T d2voua1 237 SRL 239 (265)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 16
>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}
Probab=97.44 E-value=6.4e-05 Score=66.94 Aligned_cols=78 Identities=22% Similarity=0.181 Sum_probs=62.0
Q ss_pred CCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017856 59 FTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARRLRVAVIHGLARS 138 (365)
Q Consensus 59 ~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~~r~~~~~~~s~~ 138 (365)
..|..++..++||++|.++|..|||.|.++.|+..|++.+...+... ....+..|...+..++...++.+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~p~~~~~~n~~~~d~~~l~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (292)
T d1k0ia1 172 ERMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREG--------RGELLERYSAICLRRIWKAERFSWW 243 (292)
T ss_dssp GGSEETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHHC--------CGGGGGGHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccceeeeeecCCccccccccccccccccccceeeEecCC--------CHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 45667999999999999999999999999999999999998876532 1356788888888887777666665
Q ss_pred HHHHHh
Q 017856 139 AAVMAS 144 (365)
Q Consensus 139 ~~~~~~ 144 (365)
...+.+
T Consensus 244 ~~~~~~ 249 (292)
T d1k0ia1 244 MTSVLH 249 (292)
T ss_dssp HHHHHS
T ss_pred HHHHhc
Confidence 444443
No 17
>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}
Probab=97.35 E-value=7e-05 Score=63.70 Aligned_cols=41 Identities=20% Similarity=0.156 Sum_probs=37.5
Q ss_pred CccCCCEEEecccccccCCCCchhh-hhHHHHHHHHHHHHHH
Q 017856 60 TWGRGRVTLLGDSVHAMQPNLGQGG-CMAIEDGYQLAVELEK 100 (365)
Q Consensus 60 ~w~~grv~LiGDAAH~~~P~~GqG~-n~aieDa~~La~~L~~ 100 (365)
.|..+||+++|||+|.+.|..++|+ ..|+++|..|+++|.+
T Consensus 303 ~~~~~~v~~~GD~~~~~~~~~~~gA~~sG~~aA~~l~~~~~~ 344 (347)
T d1b5qa1 303 RAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQK 344 (347)
T ss_dssp HCCBTTEEECSGGGCSSCTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCEEEEEccccCcCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 4778999999999999999999997 7789999999999975
No 18
>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}
Probab=95.74 E-value=0.0025 Score=59.28 Aligned_cols=67 Identities=19% Similarity=0.071 Sum_probs=50.3
Q ss_pred CCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHHHHhhhhcCCCCCcccHHHHHHHHHHHHH
Q 017856 58 IFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVELEKACKKSNESKTPIDIVSALKSYERARR 126 (365)
Q Consensus 58 ~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L~~~~~~~~~~~~~~~~~~~l~~Ye~~R~ 126 (365)
+++...++++|+||||..++|..|.|.+.||..+...|+.+.+++..... +...+..-+..|++..+
T Consensus 239 ip~l~~~G~lLVGDAAG~vnP~~g~GI~~Am~SG~lAAeai~~al~~~~~--~~~~~~~~~~~y~~~~~ 305 (380)
T d2gmha1 239 IPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENL--QSKTIGLHVTEYEDNLK 305 (380)
T ss_dssp CCCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCC--CCSSSSCCCTHHHHHHH
T ss_pred ccccccCCeeEEeccccccchhhcCCeeeeeccHHHHHHHHHHHHHcCCc--ccchhhhhhhhHHHHHH
Confidence 34666789999999999999999999999999999999999888754321 11122334566766544
No 19
>d3c96a2 d.16.1.2 (A:183-293) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}
Probab=95.01 E-value=0.02 Score=43.44 Aligned_cols=52 Identities=23% Similarity=0.429 Sum_probs=39.2
Q ss_pred CEEEEEeeCCC------CCCCCCcchHHHHHHHhcCCCHH---HHHHHHcCCccceEEeeeec
Q 017856 1 MQWYAFHKEPA------GGVDGPEGKKERLLKIFEGWCDN---VVDLILATDEEAILRRDIYD 54 (365)
Q Consensus 1 ~~W~~~~~~~~------~~~~~~~~~~e~l~~~~~~w~p~---~~~li~~~~~~~~~~~~~~~ 54 (365)
|+|.++...+. ......+++++++++.|++|++. +.+||++++ .+..|+++|
T Consensus 51 iN~Va~v~~~~~~~~~~~e~W~~~g~~~el~~~F~~W~~~~~di~~LI~~~~--~i~~wpl~D 111 (111)
T d3c96a2 51 VNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRNQ--LILQYPMVD 111 (111)
T ss_dssp EEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTCS--EEEEEEEEE
T ss_pred EEEEEEEecccccCCCCCCCcccccCHHHHHHHHcCCCCchhhHHHHHHhCc--ceeeccCCC
Confidence 46777764321 12234667899999999999885 889999887 688999875
No 20
>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}
Probab=64.57 E-value=1.3 Score=36.68 Aligned_cols=69 Identities=19% Similarity=0.132 Sum_probs=43.5
Q ss_pred HHHHHHhcCCCHHHHHHHHcCCccceEEeeeeccCCCCCccCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHH
Q 017856 22 ERLLKIFEGWCDNVVDLILATDEEAILRRDIYDRTPIFTWGRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVEL 98 (365)
Q Consensus 22 e~l~~~~~~w~p~~~~li~~~~~~~~~~~~~~~~~~~~~w~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L 98 (365)
..+.+++.++.|.+.+.+......... ..........+....+.++||+. .|.|++.+|+++..+|+.|
T Consensus 277 ~~~~~Ll~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~G~~~------~g~~~~~~~~~g~~~a~~~ 345 (347)
T d2ivda1 277 HATAKLLRPLDDALAALVAGIYNLGHL--ERVAAIDAALQRLPGLHLIGNAY------KGVGLNDCIRNAAQLADAL 345 (347)
T ss_dssp HHHHHHHTTTCHHHHHHHHTCCBTTHH--HHHHHHHHHHHTSTTEEECSTTT------SCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHhccCCCHHHHHHhhcceecCcc--cceecccccccCCCCEEEecccc------cCCCHHHHHHHHHHHHHHh
Confidence 456667888888888877643211000 00000000123456899999984 4889999999999998876
No 21
>d1dm9a_ d.66.1.3 (A:) Heat shock protein 15 kD {Escherichia coli [TaxId: 562]}
Probab=33.36 E-value=14 Score=26.48 Aligned_cols=38 Identities=11% Similarity=0.005 Sum_probs=25.0
Q ss_pred ccceeeCCCCceeeecCCCcEEeCCCCEEEECCCceeEEEEEEecC
Q 017856 302 HGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSDKKAIFRVKVIGT 347 (365)
Q Consensus 302 nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~~~~~f~~~~~~~ 347 (365)
+-..|||. ++.| ...+++||+|+|-.... .+.+++..-
T Consensus 30 G~V~vNg~-----~vKp--s~~vk~GDvI~i~~~~~-~~~i~V~~l 67 (104)
T d1dm9a_ 30 GKVHYNGQ-----RSKP--SKIVELNATLTLRQGND-ERTVIVKAI 67 (104)
T ss_dssp TCEEETTE-----ECCT--TCBCCTTCEEEEEETTE-EEEEEECEE
T ss_pred CCeeeCCe-----eccc--cccCCCCCEEEEEeCCe-EEEEEEEEc
Confidence 34677887 6655 36899999998866522 455555433
No 22
>d1z2la2 d.58.19.1 (A:213-329) Allantoate amidohydrolase AllC {Escherichia coli [TaxId: 562]}
Probab=29.92 E-value=19 Score=25.68 Aligned_cols=35 Identities=23% Similarity=0.125 Sum_probs=23.9
Q ss_pred CEEEecccccc-cCCCCchhhhhHHHHHHHHHHHHHHh
Q 017856 65 RVTLLGDSVHA-MQPNLGQGGCMAIEDGYQLAVELEKA 101 (365)
Q Consensus 65 rv~LiGDAAH~-~~P~~GqG~n~aieDa~~La~~L~~~ 101 (365)
+|.+.|-++|+ ..|. .+.+-++..|+.|...|.+.
T Consensus 7 ~v~~~G~~aHAGs~P~--~~~~~al~aaa~~~~~l~~~ 42 (117)
T d1z2la2 7 TVTLNGESNHAGTTPM--GYRRDTVYAFSRICHQSVEK 42 (117)
T ss_dssp EEEEECCCEETTTSCG--GGCCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCCCCcc--cccccHHHHHHHHHHHHHHH
Confidence 68899999997 8884 23445666666666655443
No 23
>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}
Probab=27.49 E-value=22 Score=27.09 Aligned_cols=36 Identities=28% Similarity=0.222 Sum_probs=27.4
Q ss_pred CCCEEEecccccccCCCCchh-----hhhHHHHHHHHHHHH
Q 017856 63 RGRVTLLGDSVHAMQPNLGQG-----GCMAIEDGYQLAVEL 98 (365)
Q Consensus 63 ~grv~LiGDAAH~~~P~~GqG-----~n~aieDa~~La~~L 98 (365)
..+|.-+||+|+..+|..|.. ++.|.+.+...|+.|
T Consensus 140 ~~~IyA~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~ni 180 (183)
T d1d7ya1 140 CPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHL 180 (183)
T ss_dssp STTEEECGGGEEEECTTTCSEEECCCHHHHHHHHHHHHHHH
T ss_pred ccccchhhhhhccceeeCCceechhHHHHHHHHHHHHHHHH
Confidence 468999999999988887753 456777777777655
No 24
>d1tu2b2 b.84.2.2 (B:170-235) Cytochrome f, small domain {Anabaena sp., strain PCC 7120 [TaxId: 1167]}
Probab=26.94 E-value=41 Score=21.89 Aligned_cols=52 Identities=21% Similarity=0.436 Sum_probs=36.4
Q ss_pred cccccceEEEEE---CCEE-EEEEcCCCccceeeCCCCceeeecCCCcEEeCCCCEEEECCC
Q 017856 278 QVSKMHARISYK---DGAF-YLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD 335 (365)
Q Consensus 278 ~VSr~Ha~i~~~---~~~~-~i~Dl~S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~ 335 (365)
+++..=..|..+ +|.+ +.....+.+|.-|.. .|++|-...++.||.|..|+.
T Consensus 6 saaG~Is~I~~~~~~~G~~~~~v~I~t~~G~~v~e------~IP~GpeLiVseG~~Vkadqp 61 (66)
T d1tu2b2 6 AATGTISKIAKQEGEDGSVKYLVDIKTESGEVVSD------TIPAGPELIVSEGQAVTAGDA 61 (66)
T ss_dssp SCCEEEEEEEEEECSSSEEEEEEEEETTTTEEECC------EECSSCCBSCCTTCEECTTCB
T ss_pred cCCEEEEEEeeccccCCceEEEEEEecCCCCEEEE------ecCCCCeEEEcCCCEEecCCc
Confidence 344455566553 3442 334446889988876 688888899999999998875
No 25
>d1hcza2 b.84.2.2 (A:168-230) Cytochrome f, small domain {Turnip (Brassica rapa) [TaxId: 3711]}
Probab=23.95 E-value=46 Score=21.43 Aligned_cols=53 Identities=13% Similarity=0.239 Sum_probs=35.6
Q ss_pred ccccccceEEEEE-CCEEEEEEcCCCccceeeCCCCceeeecCCCcEEeCCCCEEEECCC
Q 017856 277 AQVSKMHARISYK-DGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIEFGSD 335 (365)
Q Consensus 277 ~~VSr~Ha~i~~~-~~~~~i~Dl~S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~G~~ 335 (365)
.+++..=..|... .|+|.|.=....+|.-|.. .|++|-...++.||.|..|+.
T Consensus 6 AsaaG~I~~I~~~ekGgy~vtI~~~~dg~~v~~------~IP~GpeLiVseG~~V~adqp 59 (63)
T d1hcza2 6 ATAGGIISKILRKEKGGYEITIVDASNERQVID------IIPRGLELLVSEGESIKLDQP 59 (63)
T ss_dssp CSSCEEEEEEEECTTSCEEEEEEETTTTEEEEE------EECTTCCBCCCTTCEECTTCB
T ss_pred CcCCEEEEEEEEcCCCCEEEEEEecCCCCEEEE------ecCCCCeEEEcCCCEEECCCc
Confidence 3445555566655 4556553323567766655 588888899999999998875
No 26
>d1tygb_ d.15.3.2 (B:) Thiamin biosynthesis sulfur carrier protein ThiS {Bacillus subtilis [TaxId: 1423]}
Probab=23.76 E-value=16 Score=23.60 Aligned_cols=24 Identities=13% Similarity=0.191 Sum_probs=16.0
Q ss_pred CccceeeCCCCceeeecCCCcEEeCCCCEEEE
Q 017856 301 EHGTYVTDNEGRRYRVSSNFPARFRPSDTIEF 332 (365)
Q Consensus 301 ~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~ 332 (365)
-||.+|... .-..+.|++||.|.+
T Consensus 36 vN~~iv~k~--------~~~~~~L~~gD~IEI 59 (65)
T d1tygb_ 36 RNKEIIGKE--------RYHEVELCDRDVIEI 59 (65)
T ss_dssp ETTEEECGG--------GTTTSBCCSSSEEEE
T ss_pred ECCEEcCHH--------HcCcccCCCCCEEEE
Confidence 355666544 224678999999975
No 27
>d2cu3a1 d.15.3.2 (A:1-63) Uncharacterised protein TTHA0675 {Thermus thermophilus [TaxId: 274]}
Probab=23.51 E-value=19 Score=23.17 Aligned_cols=24 Identities=13% Similarity=0.018 Sum_probs=16.4
Q ss_pred CccceeeCCCCceeeecCCCcEEeCCCCEEEE
Q 017856 301 EHGTYVTDNEGRRYRVSSNFPARFRPSDTIEF 332 (365)
Q Consensus 301 ~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~~ 332 (365)
-||.+|... .-..+.|++||.|.+
T Consensus 34 vN~~ivpr~--------~~~~~~l~~gD~iEI 57 (63)
T d2cu3a1 34 LNEEAFLGL--------EVPDRPLRDGDVVEV 57 (63)
T ss_dssp ETTEEEEGG--------GCCCCCCCTTCEEEE
T ss_pred ECCEEcCHH--------HcCcccCCCCCEEEE
Confidence 466666544 234678999999976
No 28
>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}
Probab=22.11 E-value=35 Score=25.19 Aligned_cols=36 Identities=25% Similarity=0.151 Sum_probs=26.4
Q ss_pred cCCCEEEecccccccCCCCchhhhhHHHHHHHHHHHH
Q 017856 62 GRGRVTLLGDSVHAMQPNLGQGGCMAIEDGYQLAVEL 98 (365)
Q Consensus 62 ~~grv~LiGDAAH~~~P~~GqG~n~aieDa~~La~~L 98 (365)
...+|.-+||++..-.+..| +...|++-|..+++.|
T Consensus 129 ~~~~i~aiGD~~~~~~~~~~-~~~~a~~~a~~~a~~i 164 (167)
T d1xhca1 129 SAKDVYAIGDCAEYSGIIAG-TAKAAMEQARVLADIL 164 (167)
T ss_dssp SSTTEEECGGGEEBTTBCCC-SHHHHHHHHHHHHHHH
T ss_pred cCCCeEEeeecccCCCeEEC-hHHHHHHHHHHHHHHc
Confidence 35789999999876555554 4456888888888766
No 29
>d1hh2p1 b.40.4.5 (P:127-198) S1 domain of NusA {Thermotoga maritima [TaxId: 2336]}
Probab=20.50 E-value=51 Score=21.59 Aligned_cols=39 Identities=8% Similarity=0.102 Sum_probs=22.0
Q ss_pred EEEEECCEEEEEEcCCCccceeeCCCCceeeecCCCcEEeCCCCEEE
Q 017856 285 RISYKDGAFYLIDLQSEHGTYVTDNEGRRYRVSSNFPARFRPSDTIE 331 (365)
Q Consensus 285 ~i~~~~~~~~i~Dl~S~nGT~vng~~~~~~~l~~~~~~~L~~Gd~I~ 331 (365)
.+...+....+.|++..-|..-... .+ |++ ..+.||.|+
T Consensus 15 ~V~r~~~~~~~Vdlg~~eaiLp~~e-----qi-p~E--~~~~Gdrik 53 (72)
T d1hh2p1 15 EVIRVMGEWADIRIGKLETRLPKKE-----WI-PGE--EIKAGDLVK 53 (72)
T ss_dssp EEEEECSSEEEEEETTEEEEEEGGG-----SC-TTC--CCCTTCEEE
T ss_pred EEEEEcCCCEEEEECCcEEECCHHH-----cC-CCC--CCCCCCEEE
Confidence 3444456677889986666554443 33 232 355666654
Done!