Query 017862
Match_columns 365
No_of_seqs 123 out of 154
Neff 5.3
Searched_HMMs 46136
Date Fri Mar 29 04:04:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017862.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017862hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03180 reversibly glycosylat 100.0 2E-116 4E-121 854.4 25.5 341 9-349 3-345 (346)
2 PF03214 RGP: Reversibly glyco 100.0 1E-109 3E-114 804.5 22.9 337 13-350 4-347 (348)
3 PF03385 DUF288: Protein of un 100.0 5.1E-31 1.1E-35 258.7 8.8 107 240-349 1-110 (390)
4 PF00535 Glycos_transf_2: Glyc 97.7 1.6E-06 3.5E-11 72.5 -3.8 99 20-126 1-105 (169)
5 cd06433 GT_2_WfgS_like WfgS an 97.6 1.8E-05 3.8E-10 68.8 0.0 86 20-116 1-92 (202)
6 cd06421 CESA_CelA_like CESA_Ce 97.5 2.5E-05 5.4E-10 70.5 0.6 93 18-119 2-104 (234)
7 cd04196 GT_2_like_d Subfamily 97.5 2.3E-05 5E-10 69.4 -0.0 92 20-119 1-99 (214)
8 PRK10073 putative glycosyl tra 97.5 2.7E-05 5.8E-10 76.9 0.3 88 18-115 7-101 (328)
9 cd06434 GT2_HAS Hyaluronan syn 97.5 2.2E-05 4.7E-10 71.2 -0.4 95 18-124 1-102 (235)
10 cd06442 DPM1_like DPM1_like re 97.5 2E-05 4.2E-10 70.9 -1.1 87 21-116 1-95 (224)
11 cd06427 CESA_like_2 CESA_like_ 97.4 3.4E-05 7.3E-10 71.4 0.1 98 18-125 2-110 (241)
12 cd04195 GT2_AmsE_like GT2_AmsE 97.3 4.2E-05 9.1E-10 67.7 -0.4 96 20-124 1-105 (201)
13 COG0463 WcaA Glycosyltransfera 97.3 0.00019 4.1E-09 58.7 2.8 91 17-116 3-99 (291)
14 PRK10018 putative glycosyl tra 97.3 7.8E-05 1.7E-09 72.4 0.5 87 18-115 6-101 (279)
15 cd02510 pp-GalNAc-T pp-GalNAc- 97.2 7.2E-05 1.6E-09 71.7 -0.1 99 20-127 1-111 (299)
16 cd06423 CESA_like CESA_like is 97.2 8.2E-05 1.8E-09 61.8 -0.2 87 21-116 1-95 (180)
17 cd04184 GT2_RfbC_Mx_like Myxoc 97.2 9E-05 2E-09 65.5 -0.1 93 18-119 2-103 (202)
18 PLN02726 dolichyl-phosphate be 97.2 8.6E-05 1.9E-09 69.0 -0.3 93 17-118 9-112 (243)
19 cd04192 GT_2_like_e Subfamily 97.1 8.7E-05 1.9E-09 66.4 -0.5 87 21-117 1-100 (229)
20 cd02525 Succinoglycan_BP_ExoA 97.1 0.00012 2.7E-09 66.3 0.4 88 19-117 2-99 (249)
21 cd06420 GT2_Chondriotin_Pol_N 97.1 5.9E-05 1.3E-09 65.5 -1.8 86 21-115 1-95 (182)
22 cd02520 Glucosylceramide_synth 97.1 0.00018 4E-09 64.4 0.9 89 18-116 2-103 (196)
23 cd06439 CESA_like_1 CESA_like_ 97.0 0.00021 4.7E-09 65.6 1.0 92 17-118 29-128 (251)
24 cd02522 GT_2_like_a GT_2_like_ 97.0 0.00037 8.1E-09 62.4 2.4 84 19-116 1-89 (221)
25 cd06913 beta3GnTL1_like Beta 1 97.0 0.0002 4.2E-09 64.9 0.2 87 21-116 1-101 (219)
26 cd04188 DPG_synthase DPG_synth 96.9 0.00013 2.7E-09 65.8 -1.4 87 21-116 1-99 (211)
27 cd04186 GT_2_like_c Subfamily 96.9 0.00032 6.9E-09 59.1 0.5 85 21-115 1-90 (166)
28 cd04179 DPM_DPG-synthase_like 96.8 0.00019 4E-09 62.4 -1.2 87 21-116 1-96 (185)
29 PRK10063 putative glycosyl tra 96.8 0.00065 1.4E-08 64.4 1.8 88 18-115 2-98 (248)
30 TIGR03469 HonB hopene-associat 96.7 0.00092 2E-08 67.2 2.4 100 16-124 39-158 (384)
31 PRK11204 N-glycosyltransferase 96.7 0.00047 1E-08 69.2 0.3 92 18-118 55-153 (420)
32 cd04185 GT_2_like_b Subfamily 96.6 0.00034 7.4E-09 62.2 -0.9 86 21-115 1-95 (202)
33 cd06437 CESA_CaSu_A2 Cellulose 96.6 0.00099 2.1E-08 60.9 1.7 89 18-116 2-104 (232)
34 cd02526 GT2_RfbF_like RfbF is 96.5 0.00049 1.1E-08 62.4 -0.7 85 21-118 1-94 (237)
35 PRK10714 undecaprenyl phosphat 96.5 0.00062 1.3E-08 67.3 -0.3 93 16-115 5-106 (325)
36 cd06435 CESA_NdvC_like NdvC_li 96.5 0.00079 1.7E-08 61.3 0.4 91 20-119 1-104 (236)
37 cd04187 DPM1_like_bac Bacteria 96.5 0.00041 9E-09 60.7 -1.5 89 21-118 1-99 (181)
38 TIGR03472 HpnI hopanoid biosyn 96.4 0.001 2.2E-08 66.6 0.6 92 17-118 41-145 (373)
39 PTZ00260 dolichyl-phosphate be 96.4 0.0014 3.1E-08 65.0 1.4 92 16-115 69-178 (333)
40 PRK14583 hmsR N-glycosyltransf 96.3 0.00088 1.9E-08 68.6 -0.4 87 18-115 76-171 (444)
41 PF13641 Glyco_tranf_2_3: Glyc 96.3 0.00062 1.3E-08 61.6 -1.6 89 19-116 3-103 (228)
42 TIGR03111 glyc2_xrt_Gpos1 puta 96.2 0.0019 4.2E-08 66.1 1.3 90 18-116 50-148 (439)
43 cd02511 Beta4Glucosyltransfera 96.0 0.0014 3E-08 60.6 -0.5 83 19-116 2-88 (229)
44 cd06438 EpsO_like EpsO protein 95.9 0.0011 2.4E-08 58.6 -1.7 86 21-116 1-98 (183)
45 PRK13915 putative glucosyl-3-p 95.9 0.0025 5.5E-08 62.6 0.5 89 16-115 30-132 (306)
46 cd06436 GlcNAc-1-P_transferase 95.6 0.0047 1E-07 55.4 1.0 83 21-115 1-105 (191)
47 cd04190 Chitin_synth_C C-termi 94.9 0.0093 2E-07 55.8 0.8 70 21-118 1-92 (244)
48 TIGR03030 CelA cellulose synth 94.6 0.022 4.8E-07 62.2 3.0 102 18-119 132-248 (713)
49 KOG2977 Glycosyltransferase [G 94.0 0.032 6.9E-07 55.1 2.3 86 18-111 68-169 (323)
50 PF10111 Glyco_tranf_2_2: Glyc 93.8 0.018 4E-07 55.4 0.2 33 83-115 72-104 (281)
51 PRK11498 bcsA cellulose syntha 93.8 0.014 3E-07 65.1 -0.8 89 18-122 261-362 (852)
52 cd00761 Glyco_tranf_GTA_type G 92.0 0.077 1.7E-06 42.7 1.4 87 21-115 1-93 (156)
53 cd02514 GT13_GLCNAC-TI GT13_GL 91.0 0.19 4.2E-06 50.5 3.4 32 19-50 2-40 (334)
54 COG1215 Glycosyltransferases, 90.5 0.16 3.4E-06 50.7 2.2 89 17-116 54-154 (439)
55 TIGR01556 rhamnosyltran L-rham 89.3 0.062 1.3E-06 50.9 -1.7 34 85-118 56-92 (281)
56 COG1216 Predicted glycosyltran 89.0 0.12 2.6E-06 50.2 -0.0 90 17-116 3-101 (305)
57 cd04191 Glucan_BSP_ModH Glucan 86.3 0.21 4.5E-06 47.9 -0.2 56 208-268 168-227 (254)
58 KOG1476 Beta-1,3-glucuronyltra 83.3 1.5 3.3E-05 43.9 4.4 35 16-50 86-126 (330)
59 cd00218 GlcAT-I Beta1,3-glucur 81.9 0.82 1.8E-05 43.7 1.9 32 19-50 3-40 (223)
60 PRK05454 glucosyltransferase M 81.5 1.2 2.7E-05 48.9 3.3 94 14-115 121-236 (691)
61 PRK14716 bacteriophage N4 adso 74.4 1.3 2.8E-05 47.0 0.9 90 16-115 65-174 (504)
62 PF04583 Baculo_p74: Baculovir 65.0 3 6.4E-05 40.6 1.0 19 143-161 123-141 (249)
63 PLN02458 transferase, transfer 62.7 3.9 8.6E-05 41.4 1.4 32 19-50 114-153 (346)
64 KOG2978 Dolichol-phosphate man 59.3 10 0.00023 36.0 3.5 87 18-114 4-103 (238)
65 PRK14503 mannosyl-3-phosphogly 32.6 30 0.00065 35.7 2.2 94 17-114 51-175 (393)
66 TIGR02460 osmo_MPGsynth mannos 30.5 34 0.00074 35.2 2.1 94 17-114 50-174 (381)
67 PF09039 HTH_Tnp_Mu_2: Mu DNA 29.2 54 0.0012 27.9 2.9 37 288-324 30-66 (108)
68 PF09488 Osmo_MPGsynth: Mannos 24.9 37 0.00081 35.0 1.3 94 17-114 50-174 (381)
69 PF11341 DUF3143: Protein of u 24.5 15 0.00032 28.7 -1.3 22 151-172 41-63 (63)
70 PRK14502 bifunctional mannosyl 23.7 41 0.00089 37.4 1.5 94 17-114 55-179 (694)
71 KOG2492 CDK5 activator-binding 23.2 59 0.0013 34.3 2.4 60 239-299 395-466 (552)
72 PRK11234 nfrB bacteriophage N4 22.7 42 0.00092 37.4 1.3 34 17-50 63-102 (727)
No 1
>PLN03180 reversibly glycosylated polypeptide; Provisional
Probab=100.00 E-value=1.9e-116 Score=854.37 Aligned_cols=341 Identities=91% Similarity=1.555 Sum_probs=336.5
Q ss_pred CCCCCCCCCCeEEEEcCcCChhHHHHhhhccCCeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCcccCCCCCc
Q 017862 9 RPAVPLLKDELDIVIPTIRNLDFLEQWRPFFQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCISFKDS 88 (365)
Q Consensus 9 ~~~~~~~~~~i~IVItTI~~p~~l~~~r~~~~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~lP~~s~ 88 (365)
..+++++++++|||||||++++||++||++|+++|+|+|+|+|++++++.|+|+++++|+++||+++++.+.++|||+|+
T Consensus 3 ~~~~~~~~~evdIVi~TI~~~~fL~~~r~~l~~~h~iiV~d~D~~~~~~~~~G~d~~vy~r~d~~~~Lg~~~~~Ip~~~~ 82 (346)
T PLN03180 3 VSPAPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKEIKVPEGFDYELYNRNDINRILGPKASCISFKDS 82 (346)
T ss_pred CccCCCCCCcceEEEeccCchhHHHHHHHhcCcccEEEEecCCcccceeccCCCceeecCHHHHHhhhcccccccccCcc
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceeeEEEeeEEeeeecCCCcccCCCCCcccchhccccccccccCCcccccccccCCCCCCCcccccccCCCCCcchh
Q 017862 89 ACRCFGYMVSKKKYVYTIDDDCFVAKDPSGKEINALEQHIRNLLSPSTPFFFNTLYDPYRDGADFVRGYPFSLREGVPTA 168 (365)
Q Consensus 89 arrN~GYL~A~a~~I~~~DDDn~P~~d~~g~~~d~~~~h~~~l~~~~~~~~~N~ly~~f~~~~~wPRGyPl~~r~gv~~~ 168 (365)
+|||||||+|++||||+|||||+|++||.|+.+|+++||+.||.+|+||+|||+||+||+++++||||||||+|+||+|+
T Consensus 83 a~R~fGyL~s~~~yivsiDDD~~Pa~d~~g~~i~~~~qH~~NL~~pstp~~fNtLYdp~r~g~~fvRGYPfS~R~gv~va 162 (346)
T PLN03180 83 ACRCFGYLVSKKKYIFTIDDDCFVAKDPSGKLINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGVPTA 162 (346)
T ss_pred cchhhhheeecceEEEEECCCCCCCCCCccccccHHHHHHHhcCCCCCCceeecccccCccCCcccCCCCccccCCcceE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecccCCCCCccccccccCCCcccccccceeecCCCceeecccchhhhhhhcccchhhccccCCCCcCCccchhHHHH
Q 017862 169 VSHGLWLNIPDYDAPTQLVKPLERNTRFVDAIMTIPKGTLFPMCGMNLGFNRELIGPAMYFGLMGDGQPIGRYDDMWAGW 248 (365)
Q Consensus 169 iqqGL~~~~PDvDAi~rL~~~~~~~~~f~~a~vtl~~gt~~P~nsqNtaF~rea~gpa~~~~~m~~~~~~~R~~DIWrgy 248 (365)
||||||+|+|||||||||+++.++|++|++++||+|+|||+||||||||||||++|||||++||++|++++|++|||+||
T Consensus 163 iS~GLWln~PD~DA~t~l~k~~e~~t~yvdavvtip~gt~~pv~~~NlAF~ReligPA~y~g~m~~g~~i~R~dDiWsG~ 242 (346)
T PLN03180 163 VSHGLWLNIPDYDAPTQLVKPLERNTRYVDAVMTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGW 242 (346)
T ss_pred EecccccCCCcccchhhhccchhccceecccEEeccCCCEeecccchhhhhhhhcchhheecccCCCCcccchhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCeEEeecCeeeeccCCCCccchHHhhhhhhccccHHhhhhhCcCCCCCCCHHHHHHHHHHHHHHHH--HH
Q 017862 249 CSKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEELIPFFQSATLPKECTTVQKCYIELAKQVKAKL--VD 326 (365)
Q Consensus 249 ~~Qri~~~lG~~V~fg~P~v~~~r~h~~l~Dl~~E~~~~~~~~~li~fl~~~~~~~~~~~~~~c~~eL~~~~~~~l--~~ 326 (365)
|+|+||+|+|++|+||.|+|+|+|.||+|+||++|++|++++|+||+|||++++|+++.|+++||+||+++++++| ++
T Consensus 243 c~K~i~dhLG~gVktG~Pyv~h~k~~n~~~dL~~E~~Gi~l~E~i~~ff~~~~l~~~a~t~~~cy~ela~~vk~~l~~~d 322 (346)
T PLN03180 243 CAKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEEIIPFFQSVRLPKEAVTVEDCYIELAKQVKEKLGKVD 322 (346)
T ss_pred HHHHHHHHhCcceecCCceEecCCcccHHHHHHhhccCeechHHHHHHHHhccCCcccCcHHHHHHHHHHHHHhhccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 89
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCC
Q 017862 327 EYFIKLADAMVTWIEAWDELNPP 349 (365)
Q Consensus 327 ~~~~~~a~~m~~Wl~dl~~vg~~ 349 (365)
+||++.+++|++||++|+++|++
T Consensus 323 ~~f~~~a~~M~~Wi~~w~~l~~~ 345 (346)
T PLN03180 323 PYFTKLADAMVTWIEAWKELNSP 345 (346)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999986
No 2
>PF03214 RGP: Reversibly glycosylated polypeptide; InterPro: IPR004901 Alpha-1,4-glucan-protein synthase catalyses the reaction: protein + UDP-D-glucose = alpha-D-glucosyl-protein + UDP The enzyme has a possible role in the synthesis of cell wall polysaccharides in plants []. It is found associated with the cell wall, with the highest concentrations in the plasmodesmata. It is also located in the Golgi apparatus.; GO: 0008466 glycogenin glucosyltransferase activity, 0016758 transferase activity, transferring hexosyl groups, 0007047 cellular cell wall organization, 0030244 cellulose biosynthetic process, 0005618 cell wall, 0030054 cell junction
Probab=100.00 E-value=1.4e-109 Score=804.55 Aligned_cols=337 Identities=69% Similarity=1.224 Sum_probs=329.9
Q ss_pred CCCCCCeEEEEcCcC-Ch-hHHHHhhhccCCeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCcccCCCCCccc
Q 017862 13 PLLKDELDIVIPTIR-NL-DFLEQWRPFFQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSAC 90 (365)
Q Consensus 13 ~~~~~~i~IVItTI~-~p-~~l~~~r~~~~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~lP~~s~ar 90 (365)
+|+++|++|||+||+ ++ +||++||++|+++|||||+|+|+.++++.|+||+.++|+++|+++++|.+ ++|||++++|
T Consensus 4 ~~~~~~~divi~~~~~~l~~~~~~wr~~~~~~hliiv~d~~~~~~~~~p~g~~~~~y~~~di~~~lg~~-~~i~~~~~a~ 82 (348)
T PF03214_consen 4 EILDDEVDIVIPALRPNLTDFLEEWRPFFSPYHLIIVQDPDPNEEIKVPEGFDYEVYNRNDIERVLGAK-TLIPFKGDAC 82 (348)
T ss_pred ccccCcccEEeecccccHHHHHHHHHHhhcceeEEEEeCCCccccccCCcccceeeecHhhHHhhcCCc-ccccccccch
Confidence 789999999999999 88 99999999999999999999999999999999999999999999999988 8999999999
Q ss_pred cceeeEEEeeEEeeeecCCCcccCCCCCcccchhccccccccccCCcccccccccCCCCCCCcccccccCCCCCcchhee
Q 017862 91 RCFGYMVSKKKYVYTIDDDCFVAKDPSGKEINALEQHIRNLLSPSTPFFFNTLYDPYRDGADFVRGYPFSLREGVPTAVS 170 (365)
Q Consensus 91 rN~GYL~A~a~~I~~~DDDn~P~~d~~g~~~d~~~~h~~~l~~~~~~~~~N~ly~~f~~~~~wPRGyPl~~r~gv~~~iq 170 (365)
||||||+|++||||++||||+|++|+.|.+++.+.||+.|+..||||.|||+||+||+++++||||||||+|+||+|++|
T Consensus 83 R~fGyL~s~~~yivsiDDD~~P~~D~~g~~~~~v~qh~~~~~~~st~~~fNtLyd~~~e~~~f~RGyPfS~Regv~~~~s 162 (348)
T PF03214_consen 83 RNFGYLVSKKDYIVSIDDDCLPAKDDFGTHIDAVAQHVENLSTPSTPFFFNTLYDPYREGADFPRGYPFSLREGVDTAAS 162 (348)
T ss_pred hhhHhhhcccceEEEEccccccccCCccceehhhhccceeeeccCchhhhhhhcccccccCcccCCCCcccccCCceeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecccCCCCCccccccccCCCcccccccceeecCCCceeecccchhhhhhhcccchhhccccCCCCcCCccc---hhHHH
Q 017862 171 HGLWLNIPDYDAPTQLVKPLERNTRFVDAIMTIPKGTLFPMCGMNLGFNRELIGPAMYFGLMGDGQPIGRYD---DMWAG 247 (365)
Q Consensus 171 qGL~~~~PDvDAi~rL~~~~~~~~~f~~a~vtl~~gt~~P~nsqNtaF~rea~gpa~~~~~m~~~~~~~R~~---DIWrg 247 (365)
||||+|+|||||||||+++.+++++|+++++|+|+|||+|||||||||+||++||+||+++|+.++.++|++ |||+|
T Consensus 163 ~GLWln~PD~DA~t~l~~~~~r~~~~~d~~~~~p~gt~~pv~s~NlAf~Relip~~~~~~~~~~~~~~~R~d~~gDIWsG 242 (348)
T PF03214_consen 163 AGLWLNVPDLDAPTQLVKPTERNTRYVDAVLTIPRGTYLPVCSMNLAFDRELIPPAYYFPMMGNGWGIGRFDRFGDIWSG 242 (348)
T ss_pred cccccCCcccchhhhhccchhccccccCceEEecCCCEeecccchhhhhhhhcChheecccccCCCcccccccchhHHHH
Confidence 999999999999999999999999999999999999999999999999999998888888888888888888 99999
Q ss_pred HHHHHHHHHhCCeEEeecCeeeeccCCCCccchHHhhhhhhccccHHhhhhhCcCCCCCCCHHHHHHHHHHHHHHHH--H
Q 017862 248 WCSKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEELIPFFQSATLPKECTTVQKCYIELAKQVKAKL--V 325 (365)
Q Consensus 248 y~~Qri~~~lG~~V~fg~P~v~~~r~h~~l~Dl~~E~~~~~~~~~li~fl~~~~~~~~~~~~~~c~~eL~~~~~~~l--~ 325 (365)
||+|+||+|+|++|+||.|+|+|+|+|++|+||++|++|++++|+|++|||++++|+++.++++||+||+++++++| .
T Consensus 243 ~f~k~~~d~Lg~~V~~G~P~v~H~~a~~~~~dL~~E~~Gi~l~E~i~~f~q~v~Ls~~A~t~~dcy~ELA~~VkekLg~~ 322 (348)
T PF03214_consen 243 YFLKVICDHLGHGVKTGLPYVWHNKAHNAFDDLKKEVPGIELNEDILPFFQSVKLSKTAVTVEDCYRELAKQVKEKLGSV 322 (348)
T ss_pred HHHHHHHHHcCCccccCCceEEecCCCchHHHHHhhccchhhHHHHHHHHhccCCCcccccHHHHHHHHHHHHHHhccCc
Confidence 99999999999999999999999999999999999999999999999999999999889999999999999999999 7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCC
Q 017862 326 DEYFIKLADAMVTWIEAWDELNPPP 350 (365)
Q Consensus 326 ~~~~~~~a~~m~~Wl~dl~~vg~~~ 350 (365)
++||++.+++|++||++|+++|+++
T Consensus 323 dp~F~kvAdaMv~WI~AW~~lns~~ 347 (348)
T PF03214_consen 323 DPYFTKVADAMVAWIKAWKELNSGS 347 (348)
T ss_pred ChHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999875
No 3
>PF03385 DUF288: Protein of unknown function, DUF288; InterPro: IPR005049 This is a protein family of unknown function.
Probab=99.97 E-value=5.1e-31 Score=258.75 Aligned_cols=107 Identities=15% Similarity=0.252 Sum_probs=101.1
Q ss_pred ccchhHHHHHHHHHHHHhCCeEEeecCeeeeccC-CCCccchHHhhhhhhccccHHhhhhhCcCCCC-CCCHHHHHHHHH
Q 017862 240 RYDDMWAGWCSKVICDHLGLGVKTGLPYIWHSKA-SNPFVNLKKEYKGIYWQEELIPFFQSATLPKE-CTTVQKCYIELA 317 (365)
Q Consensus 240 R~~DIWrgy~~Qri~~~lG~~V~fg~P~v~~~r~-h~~l~Dl~~E~~~~~~~~~li~fl~~~~~~~~-~~~~~~c~~eL~ 317 (365)
|++|||||||+|||||.+|++|+|+||+|+|.|| |+|++||++|+++|+.+|+||+||++|+|+.. +.++++|+++|+
T Consensus 1 RvTDIWRSY~aQRLLW~~G~~VsF~PpnV~Q~RNaHdYLkDF~DEk~LY~~sG~LV~FL~~W~~~~~n~~~L~~~Il~L~ 80 (390)
T PF03385_consen 1 RVTDIWRSYWAQRLLWLSGGTVSFVPPNVVQFRNAHDYLKDFKDEKDLYEDSGRLVEFLHEWRCSKGNSSTLFECILDLY 80 (390)
T ss_pred CchhHHHHHHHHHHHHHcCCeEEEcCCceeecccccccccchHHHHHHHHhHHHHHHHHHhcCCCCCchhhHHHHHHHHH
Confidence 8999999999999999999999999999999999 99999999999999999999999999999743 457999999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHhcCCC
Q 017862 318 KQVKAKLVDEYF-IKLADAMVTWIEAWDELNPP 349 (365)
Q Consensus 318 ~~~~~~l~~~~~-~~~a~~m~~Wl~dl~~vg~~ 349 (365)
++|+++ +|| ++|+++|++||+||++||+.
T Consensus 81 ~~m~e~---GfW~~~Dv~L~~AWL~DL~sVGY~ 110 (390)
T PF03385_consen 81 VAMAEE---GFWGEEDVKLMQAWLQDLKSVGYK 110 (390)
T ss_pred HHHHHc---CCCcHHHHHHHHHHHHHHHHHHhh
Confidence 999998 455 78999999999999999985
No 4
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. This domain is found in a diverse family of glycosyl transferases that transfer the sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; PDB: 2Z87_A 2Z86_B 2D7R_A 2D7I_A 3CKN_A 3CKQ_A 3CKJ_A 3CKV_A 3CKO_A 2FFU_A ....
Probab=97.73 E-value=1.6e-06 Score=72.45 Aligned_cols=99 Identities=28% Similarity=0.317 Sum_probs=61.5
Q ss_pred EEEEcCcCCh----hHHHHhhhc-cCCeEEEEEecCCCCCCccCCCCcc-ccccchhhhhhhhcCCcccCCCCCccccce
Q 017862 20 DIVIPTIRNL----DFLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGFD-YELYNRNDINRILGPKASCISFKDSACRCF 93 (365)
Q Consensus 20 ~IVItTI~~p----~~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~~-~~~~~~~~qe~~l~~~~~~lP~~s~arrN~ 93 (365)
+|||||++++ ++|++++++ ...+++|||.|+ .+++... .+-+...+..-.+- ..--..+..+.+|.
T Consensus 1 Svvip~~n~~~~l~~~l~sl~~q~~~~~eiivvdd~------s~d~~~~~~~~~~~~~~~i~~i--~~~~n~g~~~~~n~ 72 (169)
T PF00535_consen 1 SVVIPTYNEAEYLERTLESLLKQTDPDFEIIVVDDG------STDETEEILEEYAESDPNIRYI--RNPENLGFSAARNR 72 (169)
T ss_dssp EEEEEESS-TTTHHHHHHHHHHHSGCEEEEEEEECS-------SSSHHHHHHHHHCCSTTEEEE--EHCCCSHHHHHHHH
T ss_pred CEEEEeeCCHHHHHHHHHHHhhccCCCEEEEEeccc------cccccccccccccccccccccc--cccccccccccccc
Confidence 6999999987 677777776 788999999999 6554422 11111100000000 00012356788899
Q ss_pred eeEEEeeEEeeeecCCCcccCCCCCcccchhcc
Q 017862 94 GYMVSKKKYVYTIDDDCFVAKDPSGKEINALEQ 126 (365)
Q Consensus 94 GYL~A~a~~I~~~DDDn~P~~d~~g~~~d~~~~ 126 (365)
|.-.|..+||+.+|||+.+.++++.+.++.+.+
T Consensus 73 ~~~~a~~~~i~~ld~D~~~~~~~l~~l~~~~~~ 105 (169)
T PF00535_consen 73 GIKHAKGEYILFLDDDDIISPDWLEELVEALEK 105 (169)
T ss_dssp HHHH--SSEEEEEETTEEE-TTHHHHHHHHHHH
T ss_pred cccccceeEEEEeCCCceEcHHHHHHHHHHHHh
Confidence 999999999999999999999765555555544
No 5
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=97.56 E-value=1.8e-05 Score=68.84 Aligned_cols=86 Identities=12% Similarity=0.116 Sum_probs=57.2
Q ss_pred EEEEcCcCCh----hHHHHhhhc-cCCeEEEEEecCCCCCCccCCCCcc-ccccchhhhhhhhcCCcccCCCCCccccce
Q 017862 20 DIVIPTIRNL----DFLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGFD-YELYNRNDINRILGPKASCISFKDSACRCF 93 (365)
Q Consensus 20 ~IVItTI~~p----~~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~~-~~~~~~~~qe~~l~~~~~~lP~~s~arrN~ 93 (365)
+|||||++++ +||+++.++ .+.+++|||.|. .++.... .+-+.. +... ....-..+....+|.
T Consensus 1 sivi~~~n~~~~l~~~l~sl~~q~~~~~evivvDd~------s~d~~~~~~~~~~~---~~~~--~~~~~~~g~~~a~n~ 69 (202)
T cd06433 1 SIITPTYNQAETLEETIDSVLSQTYPNIEYIVIDGG------STDGTVDIIKKYED---KITY--WISEPDKGIYDAMNK 69 (202)
T ss_pred CEEEeccchHHHHHHHHHHHHhCCCCCceEEEEeCC------CCccHHHHHHHhHh---hcEE--EEecCCcCHHHHHHH
Confidence 4899999988 566666554 677999999988 4444332 111111 1010 011112455677899
Q ss_pred eeEEEeeEEeeeecCCCcccCCC
Q 017862 94 GYMVSKKKYVYTIDDDCFVAKDP 116 (365)
Q Consensus 94 GYL~A~a~~I~~~DDDn~P~~d~ 116 (365)
|.-.|.++||+++|+|+.+.+++
T Consensus 70 ~~~~a~~~~v~~ld~D~~~~~~~ 92 (202)
T cd06433 70 GIALATGDIIGFLNSDDTLLPGA 92 (202)
T ss_pred HHHHcCCCEEEEeCCCcccCchH
Confidence 99989999999999999998864
No 6
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose. Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.
Probab=97.52 E-value=2.5e-05 Score=70.46 Aligned_cols=93 Identities=16% Similarity=0.134 Sum_probs=56.8
Q ss_pred CeEEEEcCcCCh-----hHHHHhhhc-cCC--eEEEEEecCCCCCCccCCCCcc-ccccchhhhhhhhcCCcccCCCC-C
Q 017862 18 ELDIVIPTIRNL-----DFLEQWRPF-FQA--YHLIIVQDGDPSKTIKVPEGFD-YELYNRNDINRILGPKASCISFK-D 87 (365)
Q Consensus 18 ~i~IVItTI~~p-----~~l~~~r~~-~~~--~~lVVV~D~~~~~~~ktP~g~~-~~~~~~~~qe~~l~~~~~~lP~~-s 87 (365)
.+.||||++++. ++|+++..+ .+. |++|||.|+ .+..... .+-+...++-..+.. -.+-+ .
T Consensus 2 ~vsviip~~n~~~~~l~~~l~sl~~q~~~~~~~eiivvdd~------s~d~t~~~~~~~~~~~~~~~~~~---~~~~~~~ 72 (234)
T cd06421 2 TVDVFIPTYNEPLEIVRKTLRAALAIDYPHDKLRVYVLDDG------RRPELRALAAELGVEYGYRYLTR---PDNRHAK 72 (234)
T ss_pred ceEEEEecCCCcHHHHHHHHHHHHhcCCCcccEEEEEEcCC------CchhHHHHHHHhhcccCceEEEe---CCCCCCc
Confidence 489999999964 455666554 455 899999998 5544332 111211110011110 01112 2
Q ss_pred ccccceeeEEEeeEEeeeecCCCcccCCCCCc
Q 017862 88 SACRCFGYMVSKKKYVYTIDDDCFVAKDPSGK 119 (365)
Q Consensus 88 ~arrN~GYL~A~a~~I~~~DDDn~P~~d~~g~ 119 (365)
.+..|.|.-.|..+||+++|+|+.+.++++.+
T Consensus 73 ~~~~n~~~~~a~~d~i~~lD~D~~~~~~~l~~ 104 (234)
T cd06421 73 AGNLNNALAHTTGDFVAILDADHVPTPDFLRR 104 (234)
T ss_pred HHHHHHHHHhCCCCEEEEEccccCcCccHHHH
Confidence 33468888888899999999999998864433
No 7
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=97.49 E-value=2.3e-05 Score=69.38 Aligned_cols=92 Identities=17% Similarity=0.147 Sum_probs=55.2
Q ss_pred EEEEcCcCCh----hHHHHhhhc-cCCeEEEEEecCCCCCCccCCCCcc-ccccchhhh-hhhhcCCcccCCCCCccccc
Q 017862 20 DIVIPTIRNL----DFLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGFD-YELYNRNDI-NRILGPKASCISFKDSACRC 92 (365)
Q Consensus 20 ~IVItTI~~p----~~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~~-~~~~~~~~q-e~~l~~~~~~lP~~s~arrN 92 (365)
+|||||+++. +||+++..+ .+.+++|||.|+ .+....+ .+-+..... ..... ..--..+.....|
T Consensus 1 sIvIp~yn~~~~l~~~l~sl~~q~~~~~eiiVvddg------S~d~t~~~~~~~~~~~~~~~~~~--~~~~~~G~~~~~n 72 (214)
T cd04196 1 AVLMATYNGEKYLREQLDSILAQTYKNDELIISDDG------STDGTVEIIKEYIDKDPFIIILI--RNGKNLGVARNFE 72 (214)
T ss_pred CEEEEecCcHHHHHHHHHHHHhCcCCCeEEEEEeCC------CCCCcHHHHHHHHhcCCceEEEE--eCCCCccHHHHHH
Confidence 5899999987 566666554 468999999998 5444332 111111110 00000 0000123444556
Q ss_pred eeeEEEeeEEeeeecCCCcccCCCCCc
Q 017862 93 FGYMVSKKKYVYTIDDDCFVAKDPSGK 119 (365)
Q Consensus 93 ~GYL~A~a~~I~~~DDDn~P~~d~~g~ 119 (365)
.|+..|.++||+++|+|+...++++.+
T Consensus 73 ~g~~~~~g~~v~~ld~Dd~~~~~~l~~ 99 (214)
T cd04196 73 SLLQAADGDYVFFCDQDDIWLPDKLER 99 (214)
T ss_pred HHHHhCCCCEEEEECCCcccChhHHHH
Confidence 787777799999999999988864333
No 8
>PRK10073 putative glycosyl transferase; Provisional
Probab=97.49 E-value=2.7e-05 Score=76.95 Aligned_cols=88 Identities=30% Similarity=0.369 Sum_probs=60.8
Q ss_pred CeEEEEcCcCCh----hHHHHhhhc-cCCeEEEEEecCCCCCCccCCCCcc-ccccchhhhh-hhhcCCcccCCCCCccc
Q 017862 18 ELDIVIPTIRNL----DFLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGFD-YELYNRNDIN-RILGPKASCISFKDSAC 90 (365)
Q Consensus 18 ~i~IVItTI~~p----~~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~~-~~~~~~~~qe-~~l~~~~~~lP~~s~ar 90 (365)
.++||||+++.. +||+++..+ .+.+++|||.|+ .+....+ ++-|...+.. +++.. -..+-.+.
T Consensus 7 ~vSVIIP~yN~~~~L~~~l~Sl~~Qt~~~~EIIiVdDg------StD~t~~i~~~~~~~~~~i~vi~~----~n~G~~~a 76 (328)
T PRK10073 7 KLSIIIPLYNAGKDFRAFMESLIAQTWTALEIIIVNDG------STDNSVEIAKHYAENYPHVRLLHQ----ANAGVSVA 76 (328)
T ss_pred eEEEEEeccCCHHHHHHHHHHHHhCCCCCeEEEEEeCC------CCccHHHHHHHHHhhCCCEEEEEC----CCCChHHH
Confidence 599999999977 566666555 678999999999 5544333 2222221111 11111 12456778
Q ss_pred cceeeEEEeeEEeeeecCCCcccCC
Q 017862 91 RCFGYMVSKKKYVYTIDDDCFVAKD 115 (365)
Q Consensus 91 rN~GYL~A~a~~I~~~DDDn~P~~d 115 (365)
||.|.-.|.++||.++|+|....++
T Consensus 77 rN~gl~~a~g~yi~flD~DD~~~p~ 101 (328)
T PRK10073 77 RNTGLAVATGKYVAFPDADDVVYPT 101 (328)
T ss_pred HHHHHHhCCCCEEEEECCCCccChh
Confidence 9999999999999999999998775
No 9
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan. Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.
Probab=97.48 E-value=2.2e-05 Score=71.21 Aligned_cols=95 Identities=13% Similarity=0.111 Sum_probs=56.4
Q ss_pred CeEEEEcCcCCh-h----HHHHhhhccCCeEEEEEecCCCCCCccCCCCcccccc--chhhhhhhhcCCcccCCCCCccc
Q 017862 18 ELDIVIPTIRNL-D----FLEQWRPFFQAYHLIIVQDGDPSKTIKVPEGFDYELY--NRNDINRILGPKASCISFKDSAC 90 (365)
Q Consensus 18 ~i~IVItTI~~p-~----~l~~~r~~~~~~~lVVV~D~~~~~~~ktP~g~~~~~~--~~~~qe~~l~~~~~~lP~~s~ar 90 (365)
+++||||+++++ + ||+.+..+. .+++|||.|. .+.+... .+ .........-.... .+-...
T Consensus 1 ~isVvIp~~ne~~~~l~~~l~sl~~q~-~~eiivvdd~------s~d~~~~--~l~~~~~~~~~~v~~~~~---~g~~~a 68 (235)
T cd06434 1 DVTVIIPVYDEDPDVFRECLRSILRQK-PLEIIVVTDG------DDEPYLS--ILSQTVKYGGIFVITVPH---PGKRRA 68 (235)
T ss_pred CeEEEEeecCCChHHHHHHHHHHHhCC-CCEEEEEeCC------CChHHHH--HHHhhccCCcEEEEecCC---CChHHH
Confidence 478999999976 4 555555444 8899999998 3332211 10 00000000000000 122334
Q ss_pred cceeeEEEeeEEeeeecCCCcccCCCCCcccchh
Q 017862 91 RCFGYMVSKKKYVYTIDDDCFVAKDPSGKEINAL 124 (365)
Q Consensus 91 rN~GYL~A~a~~I~~~DDDn~P~~d~~g~~~d~~ 124 (365)
.|.|...|.++||+++|+|+.+.++++.+.+..+
T Consensus 69 ~n~g~~~a~~d~v~~lD~D~~~~~~~l~~l~~~~ 102 (235)
T cd06434 69 LAEGIRHVTTDIVVLLDSDTVWPPNALPEMLKPF 102 (235)
T ss_pred HHHHHHHhCCCEEEEECCCceeChhHHHHHHHhc
Confidence 5678777889999999999999997655444444
No 10
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1. Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,
Probab=97.45 E-value=2e-05 Score=70.85 Aligned_cols=87 Identities=15% Similarity=0.203 Sum_probs=57.5
Q ss_pred EEEcCcCCh----hHHHHhhhcc--CCeEEEEEecCCCCCCccCCCCcc-ccccchhhhh-hhhcCCcccCCCCCccccc
Q 017862 21 IVIPTIRNL----DFLEQWRPFF--QAYHLIIVQDGDPSKTIKVPEGFD-YELYNRNDIN-RILGPKASCISFKDSACRC 92 (365)
Q Consensus 21 IVItTI~~p----~~l~~~r~~~--~~~~lVVV~D~~~~~~~ktP~g~~-~~~~~~~~qe-~~l~~~~~~lP~~s~arrN 92 (365)
||||+++++ .+|+++.++. ..+++|||.|. .+..... ..-+....-. .++. .--+.+...++|
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~~~eiiiVDd~------S~d~t~~~~~~~~~~~~~i~~~~---~~~n~G~~~a~n 71 (224)
T cd06442 1 IIIPTYNERENIPELIERLDAALKGIDYEIIVVDDN------SPDGTAEIVRELAKEYPRVRLIV---RPGKRGLGSAYI 71 (224)
T ss_pred CeEeccchhhhHHHHHHHHHHhhcCCCeEEEEEeCC------CCCChHHHHHHHHHhCCceEEEe---cCCCCChHHHHH
Confidence 799999987 5666666554 68999999998 5444433 1112111000 1111 112345567899
Q ss_pred eeeEEEeeEEeeeecCCCcccCCC
Q 017862 93 FGYMVSKKKYVYTIDDDCFVAKDP 116 (365)
Q Consensus 93 ~GYL~A~a~~I~~~DDDn~P~~d~ 116 (365)
.|...|..+||+++|+|+.+.+++
T Consensus 72 ~g~~~a~gd~i~~lD~D~~~~~~~ 95 (224)
T cd06442 72 EGFKAARGDVIVVMDADLSHPPEY 95 (224)
T ss_pred HHHHHcCCCEEEEEECCCCCCHHH
Confidence 999999999999999999988754
No 11
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot
Probab=97.42 E-value=3.4e-05 Score=71.36 Aligned_cols=98 Identities=9% Similarity=0.160 Sum_probs=62.1
Q ss_pred CeEEEEcCcCCh----hHHHHhhhc-c--CCeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCcccCC----CC
Q 017862 18 ELDIVIPTIRNL----DFLEQWRPF-F--QAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCIS----FK 86 (365)
Q Consensus 18 ~i~IVItTI~~p----~~l~~~r~~-~--~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~lP----~~ 86 (365)
.++||||++++. ++|+++..+ . ..+++|||.|. .++.... +........ ......++ .+
T Consensus 2 ~vsIiIp~~Ne~~~l~~~l~sl~~~~y~~~~~eiivVdd~------s~d~t~~--i~~~~~~~~--~~~i~~~~~~~~~G 71 (241)
T cd06427 2 VYTILVPLYKEAEVLPQLIASLSALDYPRSKLDVKLLLEE------DDEETIA--AARALRLPS--IFRVVVVPPSQPRT 71 (241)
T ss_pred eEEEEEecCCcHHHHHHHHHHHHhCcCCcccEEEEEEECC------CCchHHH--HHHHhccCC--CeeEEEecCCCCCc
Confidence 479999999987 677776654 2 34899999887 4443322 111100000 00011111 33
Q ss_pred CccccceeeEEEeeEEeeeecCCCcccCCCCCcccchhc
Q 017862 87 DSACRCFGYMVSKKKYVYTIDDDCFVAKDPSGKEINALE 125 (365)
Q Consensus 87 s~arrN~GYL~A~a~~I~~~DDDn~P~~d~~g~~~d~~~ 125 (365)
-.+++|.|+..|..+||+++|+|+.+.++++.+.+..+.
T Consensus 72 ~~~a~n~g~~~a~gd~i~~~DaD~~~~~~~l~~~~~~~~ 110 (241)
T cd06427 72 KPKACNYALAFARGEYVVIYDAEDAPDPDQLKKAVAAFA 110 (241)
T ss_pred hHHHHHHHHHhcCCCEEEEEcCCCCCChHHHHHHHHHHH
Confidence 457889999999999999999999999876555444443
No 12
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=97.33 E-value=4.2e-05 Score=67.69 Aligned_cols=96 Identities=15% Similarity=0.182 Sum_probs=57.8
Q ss_pred EEEEcCcCCh------hHHHHhhhc-cCCeEEEEEecCCCCCCccCCCCcc--ccccchhhhhhhhcCCcccCCCCCccc
Q 017862 20 DIVIPTIRNL------DFLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGFD--YELYNRNDINRILGPKASCISFKDSAC 90 (365)
Q Consensus 20 ~IVItTI~~p------~~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~~--~~~~~~~~qe~~l~~~~~~lP~~s~ar 90 (365)
.|||||+++. +||+++..+ .+.+++|||.|. ...++-. .+-|.....-+++-.. -..+....
T Consensus 1 sviip~~n~~~~~~l~~~l~Sl~~q~~~~~eiiivdd~------ss~d~t~~~~~~~~~~~~i~~i~~~---~n~G~~~a 71 (201)
T cd04195 1 SVLMSVYIKEKPEFLREALESILKQTLPPDEVVLVKDG------PVTQSLNEVLEEFKRKLPLKVVPLE---KNRGLGKA 71 (201)
T ss_pred CEEEEccccchHHHHHHHHHHHHhcCCCCcEEEEEECC------CCchhHHHHHHHHHhcCCeEEEEcC---ccccHHHH
Confidence 4899999752 566666555 457899999998 4222211 1111111000000000 01345778
Q ss_pred cceeeEEEeeEEeeeecCCCcccCCCCCcccchh
Q 017862 91 RCFGYMVSKKKYVYTIDDDCFVAKDPSGKEINAL 124 (365)
Q Consensus 91 rN~GYL~A~a~~I~~~DDDn~P~~d~~g~~~d~~ 124 (365)
+|.|...|.++||+++|+|..+.++.+...+..+
T Consensus 72 ~N~g~~~a~gd~i~~lD~Dd~~~~~~l~~~~~~~ 105 (201)
T cd04195 72 LNEGLKHCTYDWVARMDTDDISLPDRFEKQLDFI 105 (201)
T ss_pred HHHHHHhcCCCEEEEeCCccccCcHHHHHHHHHH
Confidence 9999999999999999999999886444333333
No 13
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=97.27 E-value=0.00019 Score=58.72 Aligned_cols=91 Identities=21% Similarity=0.280 Sum_probs=59.3
Q ss_pred CCeEEEEcCcCCh----hHHHHhhhc-cCCeEEEEEecCCCCCCccCCCCcc-ccccchhhhhhhhcCCcccCCCCCccc
Q 017862 17 DELDIVIPTIRNL----DFLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGFD-YELYNRNDINRILGPKASCISFKDSAC 90 (365)
Q Consensus 17 ~~i~IVItTI~~p----~~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~~-~~~~~~~~qe~~l~~~~~~lP~~s~ar 90 (365)
-.+.|||||+++. .+|++..++ ...+++|||.|+ .+..+-+ ..-+.... ..... ....-..+-...
T Consensus 3 ~~~siiip~~n~~~~l~~~l~s~~~q~~~~~eiivvddg------s~d~t~~~~~~~~~~~-~~~~~-~~~~~~~g~~~~ 74 (291)
T COG0463 3 PKVSVVIPTYNEEEYLPEALESLLNQTYKDFEIIVVDDG------STDGTTEIAIEYGAKD-VRVIR-LINERNGGLGAA 74 (291)
T ss_pred ccEEEEEeccchhhhHHHHHHHHHhhhhcceEEEEEeCC------CCCChHHHHHHHhhhc-ceEEE-eecccCCChHHH
Confidence 4689999999988 566666555 455899999998 5544322 11121111 00100 001112556778
Q ss_pred cceeeEEEeeEEeeeecCCCcccCCC
Q 017862 91 RCFGYMVSKKKYVYTIDDDCFVAKDP 116 (365)
Q Consensus 91 rN~GYL~A~a~~I~~~DDDn~P~~d~ 116 (365)
+|.|+.++..+||.++|.|.. +++.
T Consensus 75 ~~~~~~~~~~~~~~~~d~d~~-~~~~ 99 (291)
T COG0463 75 RNAGLEYARGDYIVFLDADDQ-HPPE 99 (291)
T ss_pred HHhhHHhccCCEEEEEccCCC-CCHH
Confidence 888999999999999999999 8863
No 14
>PRK10018 putative glycosyl transferase; Provisional
Probab=97.26 E-value=7.8e-05 Score=72.40 Aligned_cols=87 Identities=20% Similarity=0.306 Sum_probs=57.5
Q ss_pred CeEEEEcCcCCh----hHHHHhhhc-cCCeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCccc----CCCCCc
Q 017862 18 ELDIVIPTIRNL----DFLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASC----ISFKDS 88 (365)
Q Consensus 18 ~i~IVItTI~~p----~~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~----lP~~s~ 88 (365)
.++|||||+++. ++|+++..+ .+.|++|||.|+ .+ +.+ . ..+..++.-.....+ -..+..
T Consensus 6 ~VSVIip~yN~~~~l~~~l~Svl~Qt~~~~EiIVVDDg------S~--~~~--~-~~~~~~~~~~~ri~~i~~~~n~G~~ 74 (279)
T PRK10018 6 LISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDC------ST--SWE--Q-LQQYVTALNDPRITYIHNDINSGAC 74 (279)
T ss_pred EEEEEEEeCCCHHHHHHHHHHHHhCCCCCeEEEEEECC------CC--CHH--H-HHHHHHHcCCCCEEEEECCCCCCHH
Confidence 489999999988 455555444 788999999998 33 111 1 001111110111111 124556
Q ss_pred cccceeeEEEeeEEeeeecCCCcccCC
Q 017862 89 ACRCFGYMVSKKKYVYTIDDDCFVAKD 115 (365)
Q Consensus 89 arrN~GYL~A~a~~I~~~DDDn~P~~d 115 (365)
+.+|.|.-.|.++||.++|+|....++
T Consensus 75 ~a~N~gi~~a~g~~I~~lDaDD~~~p~ 101 (279)
T PRK10018 75 AVRNQAIMLAQGEYITGIDDDDEWTPN 101 (279)
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCcc
Confidence 789999999999999999999998875
No 15
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans. UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.
Probab=97.22 E-value=7.2e-05 Score=71.73 Aligned_cols=99 Identities=12% Similarity=0.057 Sum_probs=62.0
Q ss_pred EEEEcCcCCh-----hHHHHhhhccC---CeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCcccC----CCCC
Q 017862 20 DIVIPTIRNL-----DFLEQWRPFFQ---AYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCI----SFKD 87 (365)
Q Consensus 20 ~IVItTI~~p-----~~l~~~r~~~~---~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~l----P~~s 87 (365)
+|||||+++. +||+++.++.. .+++|||.|. .+..... .......+.. ....++| +.+-
T Consensus 1 SIIIp~~N~~~~~l~~~l~Sl~~~~~~~~~~EIIvVDd~------S~d~t~~--~~~~~~~~~~-~~~v~vi~~~~n~G~ 71 (299)
T cd02510 1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDF------SDKPELK--LLLEEYYKKY-LPKVKVLRLKKREGL 71 (299)
T ss_pred CEEEEEecCcHHHHHHHHHHHHhcCchhcCCEEEEEECC------CCchHHH--HHHHHHHhhc-CCcEEEEEcCCCCCH
Confidence 5999999977 45565555432 3599999998 3332211 1111000000 0111221 2445
Q ss_pred ccccceeeEEEeeEEeeeecCCCcccCCCCCcccchhccc
Q 017862 88 SACRCFGYMVSKKKYVYTIDDDCFVAKDPSGKEINALEQH 127 (365)
Q Consensus 88 ~arrN~GYL~A~a~~I~~~DDDn~P~~d~~g~~~d~~~~h 127 (365)
.+.+|.|.-.|.++||+++|+|+.+.++|+...++.+.++
T Consensus 72 ~~a~N~g~~~A~gd~i~fLD~D~~~~~~wL~~ll~~l~~~ 111 (299)
T cd02510 72 IRARIAGARAATGDVLVFLDSHCEVNVGWLEPLLARIAEN 111 (299)
T ss_pred HHHHHHHHHHccCCEEEEEeCCcccCccHHHHHHHHHHhC
Confidence 6789999999999999999999999988876666655543
No 16
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily. The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the
Probab=97.18 E-value=8.2e-05 Score=61.82 Aligned_cols=87 Identities=17% Similarity=0.272 Sum_probs=55.2
Q ss_pred EEEcCcCCh----hHHHHhhhc-cCCeEEEEEecCCCCCCccCCCCccccccchhhhh---hhhcCCcccCCCCCccccc
Q 017862 21 IVIPTIRNL----DFLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDIN---RILGPKASCISFKDSACRC 92 (365)
Q Consensus 21 IVItTI~~p----~~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe---~~l~~~~~~lP~~s~arrN 92 (365)
|||||++++ ++|+++..+ .+.+++|||.|. .+..... ......++ .... ...-=..+-...+|
T Consensus 1 Viip~~n~~~~l~~~l~sl~~q~~~~~~iivvdd~------s~d~t~~--~~~~~~~~~~~~~~~-~~~~~~~g~~~~~n 71 (180)
T cd06423 1 IIVPAYNEEAVIERTIESLLALDYPKLEVIVVDDG------STDDTLE--ILEELAALYIRRVLV-VRDKENGGKAGALN 71 (180)
T ss_pred CeecccChHHHHHHHHHHHHhCCCCceEEEEEeCC------CccchHH--HHHHHhccccceEEE-EEecccCCchHHHH
Confidence 789999988 566666554 478999999998 4433322 11111000 0000 00111244567788
Q ss_pred eeeEEEeeEEeeeecCCCcccCCC
Q 017862 93 FGYMVSKKKYVYTIDDDCFVAKDP 116 (365)
Q Consensus 93 ~GYL~A~a~~I~~~DDDn~P~~d~ 116 (365)
.|+-.+..+||.++|+|..+.+++
T Consensus 72 ~~~~~~~~~~i~~~D~D~~~~~~~ 95 (180)
T cd06423 72 AGLRHAKGDIVVVLDADTILEPDA 95 (180)
T ss_pred HHHHhcCCCEEEEECCCCCcChHH
Confidence 898888899999999999998753
No 17
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis. The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.
Probab=97.17 E-value=9e-05 Score=65.46 Aligned_cols=93 Identities=17% Similarity=0.181 Sum_probs=57.6
Q ss_pred CeEEEEcCcCCh-----hHHHHhhhc-cCCeEEEEEecCCCCCCccCCCCcc--ccccchhhhhh-hhcCCcccCCCCCc
Q 017862 18 ELDIVIPTIRNL-----DFLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGFD--YELYNRNDINR-ILGPKASCISFKDS 88 (365)
Q Consensus 18 ~i~IVItTI~~p-----~~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~~--~~~~~~~~qe~-~l~~~~~~lP~~s~ 88 (365)
.++||||++++. .||+++.++ ...+++|||.|+ .++.+.. .+-+...+... +.... -..+-.
T Consensus 2 ~vsiii~~~n~~~~~l~~~l~sl~~q~~~~~eiivvd~g------s~d~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~ 72 (202)
T cd04184 2 LISIVMPVYNTPEKYLREAIESVRAQTYPNWELCIADDA------STDPEVKRVLKKYAAQDPRIKVVFRE---ENGGIS 72 (202)
T ss_pred eEEEEEecccCcHHHHHHHHHHHHhCcCCCeEEEEEeCC------CCChHHHHHHHHHHhcCCCEEEEEcc---cCCCHH
Confidence 489999999976 566777655 567899999988 3332211 00010000000 00000 012334
Q ss_pred cccceeeEEEeeEEeeeecCCCcccCCCCCc
Q 017862 89 ACRCFGYMVSKKKYVYTIDDDCFVAKDPSGK 119 (365)
Q Consensus 89 arrN~GYL~A~a~~I~~~DDDn~P~~d~~g~ 119 (365)
..+|.|+-.|..+||.++|+|+.+.++++.+
T Consensus 73 ~a~n~g~~~a~~d~i~~ld~D~~~~~~~l~~ 103 (202)
T cd04184 73 AATNSALELATGEFVALLDHDDELAPHALYE 103 (202)
T ss_pred HHHHHHHHhhcCCEEEEECCCCcCChHHHHH
Confidence 6689999989999999999999998864433
No 18
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase
Probab=97.16 E-value=8.6e-05 Score=68.97 Aligned_cols=93 Identities=13% Similarity=0.088 Sum_probs=56.4
Q ss_pred CCeEEEEcCcCCh----hHHHHhhhc---cCCeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCcccC----CC
Q 017862 17 DELDIVIPTIRNL----DFLEQWRPF---FQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCI----SF 85 (365)
Q Consensus 17 ~~i~IVItTI~~p----~~l~~~r~~---~~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~l----P~ 85 (365)
-+++||||++++. .+++.+++. ...+++|||.|+ .+..+.+ +.... +++........+ ..
T Consensus 9 ~~vsVvIp~yne~~~l~~~l~~l~~~~~~~~~~eiivvDdg------S~D~t~~--i~~~~-~~~~~~~~v~~~~~~~n~ 79 (243)
T PLN02726 9 MKYSIIVPTYNERLNIALIVYLIFKALQDVKDFEIIVVDDG------SPDGTQD--VVKQL-QKVYGEDRILLRPRPGKL 79 (243)
T ss_pred ceEEEEEccCCchhhHHHHHHHHHHHhccCCCeEEEEEeCC------CCCCHHH--HHHHH-HHhcCCCcEEEEecCCCC
Confidence 4699999999977 344455443 347899999998 4433322 11110 000000111111 13
Q ss_pred CCccccceeeEEEeeEEeeeecCCCcccCCCCC
Q 017862 86 KDSACRCFGYMVSKKKYVYTIDDDCFVAKDPSG 118 (365)
Q Consensus 86 ~s~arrN~GYL~A~a~~I~~~DDDn~P~~d~~g 118 (365)
+..+..|.|...|.++||+++|.|+.+.++++.
T Consensus 80 G~~~a~n~g~~~a~g~~i~~lD~D~~~~~~~l~ 112 (243)
T PLN02726 80 GLGTAYIHGLKHASGDFVVIMDADLSHHPKYLP 112 (243)
T ss_pred CHHHHHHHHHHHcCCCEEEEEcCCCCCCHHHHH
Confidence 345567778878889999999999998775433
No 19
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=97.14 E-value=8.7e-05 Score=66.39 Aligned_cols=87 Identities=14% Similarity=0.224 Sum_probs=52.8
Q ss_pred EEEcCcCCh----hHHHHhhhc-cCC--eEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCcccCCCC------C
Q 017862 21 IVIPTIRNL----DFLEQWRPF-FQA--YHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCISFK------D 87 (365)
Q Consensus 21 IVItTI~~p----~~l~~~r~~-~~~--~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~lP~~------s 87 (365)
|||||++++ +||+++..+ .+. +++|||.|. .+....+ +.. .+....+.....++.. -
T Consensus 1 viip~~n~~~~l~~~l~sl~~q~~~~~~~eiivvdd~------s~d~t~~--~~~--~~~~~~~~~v~~~~~~~~~~~g~ 70 (229)
T cd04192 1 VVIAARNEAENLPRLLQSLSALDYPKEKFEVILVDDH------STDGTVQ--ILE--FAAAKPNFQLKILNNSRVSISGK 70 (229)
T ss_pred CEEEecCcHHHHHHHHHHHHhCCCCCCceEEEEEcCC------CCcChHH--HHH--HHHhCCCcceEEeeccCcccchh
Confidence 799999988 577776555 455 899999998 4443322 111 0111111122233222 1
Q ss_pred ccccceeeEEEeeEEeeeecCCCcccCCCC
Q 017862 88 SACRCFGYMVSKKKYVYTIDDDCFVAKDPS 117 (365)
Q Consensus 88 ~arrN~GYL~A~a~~I~~~DDDn~P~~d~~ 117 (365)
....|.|.-.|.++||+++|+|+.+.++++
T Consensus 71 ~~a~n~g~~~~~~d~i~~~D~D~~~~~~~l 100 (229)
T cd04192 71 KNALTTAIKAAKGDWIVTTDADCVVPSNWL 100 (229)
T ss_pred HHHHHHHHHHhcCCEEEEECCCcccCHHHH
Confidence 223466666667999999999999988543
No 20
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
Probab=97.12 E-value=0.00012 Score=66.27 Aligned_cols=88 Identities=19% Similarity=0.275 Sum_probs=54.5
Q ss_pred eEEEEcCcCCh----hHHHHhhhc-c--CCeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCcccC---CCCCc
Q 017862 19 LDIVIPTIRNL----DFLEQWRPF-F--QAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCI---SFKDS 88 (365)
Q Consensus 19 i~IVItTI~~p----~~l~~~r~~-~--~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~l---P~~s~ 88 (365)
++|||||++++ ++|+.+.++ . ..+++|||.|. .+.+..+ .+....++ .....++ ..+..
T Consensus 2 ~sIiip~~n~~~~l~~~l~sl~~q~~~~~~~evivvd~~------s~d~~~~--~~~~~~~~---~~~v~~i~~~~~~~~ 70 (249)
T cd02525 2 VSIIIPVRNEEKYIEELLESLLNQSYPKDLIEIIVVDGG------STDGTRE--IVQEYAAK---DPRIRLIDNPKRIQS 70 (249)
T ss_pred EEEEEEcCCchhhHHHHHHHHHhccCCCCccEEEEEeCC------CCccHHH--HHHHHHhc---CCeEEEEeCCCCCch
Confidence 78999999988 456666554 3 57899999887 3332211 11110000 0001111 11234
Q ss_pred cccceeeEEEeeEEeeeecCCCcccCCCC
Q 017862 89 ACRCFGYMVSKKKYVYTIDDDCFVAKDPS 117 (365)
Q Consensus 89 arrN~GYL~A~a~~I~~~DDDn~P~~d~~ 117 (365)
..+|.|.-.|..+||.++|+|+.+.++++
T Consensus 71 ~a~N~g~~~a~~d~v~~lD~D~~~~~~~l 99 (249)
T cd02525 71 AGLNIGIRNSRGDIIIRVDAHAVYPKDYI 99 (249)
T ss_pred HHHHHHHHHhCCCEEEEECCCccCCHHHH
Confidence 56899988888999999999999977543
No 21
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm
Probab=97.11 E-value=5.9e-05 Score=65.53 Aligned_cols=86 Identities=22% Similarity=0.297 Sum_probs=52.7
Q ss_pred EEEcCcCCh----hHHHHhhhc-cCCeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCccc--C--CCCCcccc
Q 017862 21 IVIPTIRNL----DFLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASC--I--SFKDSACR 91 (365)
Q Consensus 21 IVItTI~~p----~~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~--l--P~~s~arr 91 (365)
||||+++++ ++|+++.++ ...+++|||.|. .+..... +.. +..+......... - .++..+.+
T Consensus 1 ivip~~n~~~~l~~~l~sl~~q~~~~~eiivvdd~------s~d~t~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (182)
T cd06420 1 LIITTYNRPEALELVLKSVLNQSILPFEVIIADDG------STEETKE--LIE-EFKSQFPIPIKHVWQEDEGFRKAKIR 71 (182)
T ss_pred CEEeecCChHHHHHHHHHHHhccCCCCEEEEEeCC------CchhHHH--HHH-HHHhhcCCceEEEEcCCcchhHHHHH
Confidence 799999988 455666554 478999999998 3332211 110 0000000000000 0 12334567
Q ss_pred ceeeEEEeeEEeeeecCCCcccCC
Q 017862 92 CFGYMVSKKKYVYTIDDDCFVAKD 115 (365)
Q Consensus 92 N~GYL~A~a~~I~~~DDDn~P~~d 115 (365)
|.|.-.|.++||+++|+|+.|.++
T Consensus 72 n~g~~~a~g~~i~~lD~D~~~~~~ 95 (182)
T cd06420 72 NKAIAAAKGDYLIFIDGDCIPHPD 95 (182)
T ss_pred HHHHHHhcCCEEEEEcCCcccCHH
Confidence 999988999999999999999774
No 22
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis. UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.
Probab=97.07 E-value=0.00018 Score=64.40 Aligned_cols=89 Identities=13% Similarity=0.094 Sum_probs=54.4
Q ss_pred CeEEEEcCcCCh----hHHHHhhhc-cCCeEEEEEecCCCCCCccCCCCcc-ccccchhhhhhhhcCCcccC----CCCC
Q 017862 18 ELDIVIPTIRNL----DFLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGFD-YELYNRNDINRILGPKASCI----SFKD 87 (365)
Q Consensus 18 ~i~IVItTI~~p----~~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~~-~~~~~~~~qe~~l~~~~~~l----P~~s 87 (365)
.++||||++++. ++|+++.++ .+.+++|||.|. .+..... .+-+..... .....++ +.+.
T Consensus 2 ~vsviip~~n~~~~l~~~L~sl~~q~~~~~eiivVdd~------s~d~t~~~~~~~~~~~~----~~~~~~~~~~~~~g~ 71 (196)
T cd02520 2 GVSILKPLCGVDPNLYENLESFFQQDYPKYEILFCVQD------EDDPAIPVVRKLIAKYP----NVDARLLIGGEKVGI 71 (196)
T ss_pred CeEEEEecCCCCccHHHHHHHHHhccCCCeEEEEEeCC------CcchHHHHHHHHHHHCC----CCcEEEEecCCcCCC
Confidence 379999999966 677777665 577999999998 5543322 111111100 0000111 1111
Q ss_pred -cc--ccceeeEEEeeEEeeeecCCCcccCCC
Q 017862 88 -SA--CRCFGYMVSKKKYVYTIDDDCFVAKDP 116 (365)
Q Consensus 88 -~a--rrN~GYL~A~a~~I~~~DDDn~P~~d~ 116 (365)
.+ ..|.|+-.|..+||+++|+|+.+.+++
T Consensus 72 ~~~~~~~n~g~~~a~~d~i~~~D~D~~~~~~~ 103 (196)
T cd02520 72 NPKVNNLIKGYEEARYDILVISDSDISVPPDY 103 (196)
T ss_pred CHhHHHHHHHHHhCCCCEEEEECCCceEChhH
Confidence 11 235677777899999999999987753
No 23
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily. This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.
Probab=97.03 E-value=0.00021 Score=65.63 Aligned_cols=92 Identities=16% Similarity=0.207 Sum_probs=57.2
Q ss_pred CCeEEEEcCcCCh----hHHHHhhhc-cCC--eEEEEEecCCCCCCccCCCCcc-ccccchhhhhhhhcCCcccCCCCCc
Q 017862 17 DELDIVIPTIRNL----DFLEQWRPF-FQA--YHLIIVQDGDPSKTIKVPEGFD-YELYNRNDINRILGPKASCISFKDS 88 (365)
Q Consensus 17 ~~i~IVItTI~~p----~~l~~~r~~-~~~--~~lVVV~D~~~~~~~ktP~g~~-~~~~~~~~qe~~l~~~~~~lP~~s~ 88 (365)
-.+.||||++++. +||+++.++ .+. +++|||.|. .+..... ..-+... .-.+.-... ..+..
T Consensus 29 ~~isVvip~~n~~~~l~~~l~si~~q~~~~~~~eiivvdd~------s~d~t~~~~~~~~~~-~v~~i~~~~---~~g~~ 98 (251)
T cd06439 29 PTVTIIIPAYNEEAVIEAKLENLLALDYPRDRLEIIVVSDG------STDGTAEIAREYADK-GVKLLRFPE---RRGKA 98 (251)
T ss_pred CEEEEEEecCCcHHHHHHHHHHHHhCcCCCCcEEEEEEECC------CCccHHHHHHHHhhC-cEEEEEcCC---CCChH
Confidence 3499999999987 566666554 333 899999998 5443322 1111111 000111001 13445
Q ss_pred cccceeeEEEeeEEeeeecCCCcccCCCCC
Q 017862 89 ACRCFGYMVSKKKYVYTIDDDCFVAKDPSG 118 (365)
Q Consensus 89 arrN~GYL~A~a~~I~~~DDDn~P~~d~~g 118 (365)
..+|.|+-.|..+||+++|+|+.+.++++.
T Consensus 99 ~a~n~gi~~a~~d~i~~lD~D~~~~~~~l~ 128 (251)
T cd06439 99 AALNRALALATGEIVVFTDANALLDPDALR 128 (251)
T ss_pred HHHHHHHHHcCCCEEEEEccccCcCHHHHH
Confidence 567888888889999999999999875433
No 24
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function. Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=97.02 E-value=0.00037 Score=62.40 Aligned_cols=84 Identities=17% Similarity=0.224 Sum_probs=56.1
Q ss_pred eEEEEcCcCCh----hHHHHhhhc-cCCeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCcccCCCCCccccce
Q 017862 19 LDIVIPTIRNL----DFLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCF 93 (365)
Q Consensus 19 i~IVItTI~~p----~~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~lP~~s~arrN~ 93 (365)
++||||+++++ ++|+++..+ ...+++|||.|. .+.+... +... ........+.+....+|.
T Consensus 1 vsvii~~~n~~~~l~~~l~sl~~q~~~~~evivvdd~------s~d~~~~--~~~~------~~~~~~~~~~g~~~a~n~ 66 (221)
T cd02522 1 LSIIIPTLNEAENLPRLLASLRRLNPLPLEIIVVDGG------STDGTVA--IARS------AGVVVISSPKGRARQMNA 66 (221)
T ss_pred CEEEEEccCcHHHHHHHHHHHHhccCCCcEEEEEeCC------CCccHHH--HHhc------CCeEEEeCCcCHHHHHHH
Confidence 57999999987 566776655 367999999887 4433322 1111 000000112344566799
Q ss_pred eeEEEeeEEeeeecCCCcccCCC
Q 017862 94 GYMVSKKKYVYTIDDDCFVAKDP 116 (365)
Q Consensus 94 GYL~A~a~~I~~~DDDn~P~~d~ 116 (365)
|...|..+||+++|+|+.+.+++
T Consensus 67 g~~~a~~~~i~~~D~D~~~~~~~ 89 (221)
T cd02522 67 GAAAARGDWLLFLHADTRLPPDW 89 (221)
T ss_pred HHHhccCCEEEEEcCCCCCChhH
Confidence 98888899999999999997753
No 25
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine . This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.
Probab=96.97 E-value=0.0002 Score=64.95 Aligned_cols=87 Identities=13% Similarity=0.187 Sum_probs=55.1
Q ss_pred EEEcCcCCh----hHHHHhhhc-cC-CeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCcccC--------CCC
Q 017862 21 IVIPTIRNL----DFLEQWRPF-FQ-AYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCI--------SFK 86 (365)
Q Consensus 21 IVItTI~~p----~~l~~~r~~-~~-~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~l--------P~~ 86 (365)
||||++++. +||+++..+ .+ .+++|||.|. .+..... +... ..++........+ ..+
T Consensus 1 ViIp~yn~~~~l~~~l~sl~~q~~~~~~eiiVvDd~------S~d~t~~--i~~~-~~~~~~~~~~~~~~~~~~~~~~~G 71 (219)
T cd06913 1 IILPVHNGEQWLDECLESVLQQDFEGTLELSVFNDA------STDKSAE--IIEK-WRKKLEDSGVIVLVGSHNSPSPKG 71 (219)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCCCCCEEEEEEeCC------CCccHHH--HHHH-HHHhCcccCeEEEEecccCCCCcc
Confidence 799999987 566666554 34 6999999998 5444332 1111 1111111111111 123
Q ss_pred CccccceeeEEEeeEEeeeecCCCcccCCC
Q 017862 87 DSACRCFGYMVSKKKYVYTIDDDCFVAKDP 116 (365)
Q Consensus 87 s~arrN~GYL~A~a~~I~~~DDDn~P~~d~ 116 (365)
-.+.||.|.-.|..+||.++|+|..+.+++
T Consensus 72 ~~~a~N~g~~~a~gd~i~~lD~D~~~~~~~ 101 (219)
T cd06913 72 VGYAKNQAIAQSSGRYLCFLDSDDVMMPQR 101 (219)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCccCChhH
Confidence 446789999888899999999999988864
No 26
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation. UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.
Probab=96.94 E-value=0.00013 Score=65.81 Aligned_cols=87 Identities=20% Similarity=0.282 Sum_probs=57.7
Q ss_pred EEEcCcCCh----hHHHHhhhcc-----CCeEEEEEecCCCCCCccCCCCcc-ccccchhhhh--hhhcCCcccCCCCCc
Q 017862 21 IVIPTIRNL----DFLEQWRPFF-----QAYHLIIVQDGDPSKTIKVPEGFD-YELYNRNDIN--RILGPKASCISFKDS 88 (365)
Q Consensus 21 IVItTI~~p----~~l~~~r~~~-----~~~~lVVV~D~~~~~~~ktP~g~~-~~~~~~~~qe--~~l~~~~~~lP~~s~ 88 (365)
||||++++. +||+++.++. ..+++|||.|+ .+..... ..-+...... ++.. .--+.+..
T Consensus 1 iiip~yN~~~~l~~~l~~l~~~~~~~~~~~~eiivvdd~------S~D~t~~~~~~~~~~~~~~i~~i~---~~~n~G~~ 71 (211)
T cd04188 1 VVIPAYNEEKRLPPTLEEAVEYLEERPSFSYEIIVVDDG------SKDGTAEVARKLARKNPALIRVLT---LPKNRGKG 71 (211)
T ss_pred CEEcccChHHHHHHHHHHHHHHHhccCCCCEEEEEEeCC------CCCchHHHHHHHHHhCCCcEEEEE---cccCCCcH
Confidence 799999966 6778876653 58999999998 5444332 1111111100 0111 11235677
Q ss_pred cccceeeEEEeeEEeeeecCCCcccCCC
Q 017862 89 ACRCFGYMVSKKKYVYTIDDDCFVAKDP 116 (365)
Q Consensus 89 arrN~GYL~A~a~~I~~~DDDn~P~~d~ 116 (365)
+..|.|+..|..+||+++|.|..+.+++
T Consensus 72 ~a~~~g~~~a~gd~i~~ld~D~~~~~~~ 99 (211)
T cd04188 72 GAVRAGMLAARGDYILFADADLATPFEE 99 (211)
T ss_pred HHHHHHHHHhcCCEEEEEeCCCCCCHHH
Confidence 7888999999999999999999988753
No 27
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=96.85 E-value=0.00032 Score=59.14 Aligned_cols=85 Identities=18% Similarity=0.199 Sum_probs=54.2
Q ss_pred EEEcCcCCh----hHHHHhhhc-cCCeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCcccCCCCCccccceee
Q 017862 21 IVIPTIRNL----DFLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGY 95 (365)
Q Consensus 21 IVItTI~~p----~~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~lP~~s~arrN~GY 95 (365)
||||+++++ ++|+++..+ .+.+++|||.|+ .+++..+ .......+...- ..--..+....+|.|.
T Consensus 1 vii~~~~~~~~l~~~l~sl~~~~~~~~~iiivdd~------s~~~~~~--~~~~~~~~~~~~--~~~~~~g~~~a~n~~~ 70 (166)
T cd04186 1 IIIVNYNSLEYLKACLDSLLAQTYPDFEVIVVDNA------STDGSVE--LLRELFPEVRLI--RNGENLGFGAGNNQGI 70 (166)
T ss_pred CEEEecCCHHHHHHHHHHHHhccCCCeEEEEEECC------CCchHHH--HHHHhCCCeEEE--ecCCCcChHHHhhHHH
Confidence 689999988 455666554 368899999998 4444322 000000000000 0011245667788888
Q ss_pred EEEeeEEeeeecCCCcccCC
Q 017862 96 MVSKKKYVYTIDDDCFVAKD 115 (365)
Q Consensus 96 L~A~a~~I~~~DDDn~P~~d 115 (365)
-.|..+||+++|||+.+.++
T Consensus 71 ~~~~~~~i~~~D~D~~~~~~ 90 (166)
T cd04186 71 REAKGDYVLLLNPDTVVEPG 90 (166)
T ss_pred hhCCCCEEEEECCCcEECcc
Confidence 88889999999999999775
No 28
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the ex
Probab=96.82 E-value=0.00019 Score=62.41 Aligned_cols=87 Identities=20% Similarity=0.300 Sum_probs=57.2
Q ss_pred EEEcCcCCh----hHHHHhhhcc---CCeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcC--CcccCCCCCcccc
Q 017862 21 IVIPTIRNL----DFLEQWRPFF---QAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGP--KASCISFKDSACR 91 (365)
Q Consensus 21 IVItTI~~p----~~l~~~r~~~---~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~--~~~~lP~~s~arr 91 (365)
||||+++++ +||+++.++. ..+++|||.|. .+..... +... ..++.... ...--+.+-.+.+
T Consensus 1 iii~~~n~~~~l~~~l~sl~~~~~~~~~~eiivvd~~------s~d~~~~--~~~~-~~~~~~~~~~~~~~~n~G~~~a~ 71 (185)
T cd04179 1 VVIPAYNEEENIPELVERLLAVLEEGYDYEIIVVDDG------STDGTAE--IARE-LAARVPRVRVIRLSRNFGKGAAV 71 (185)
T ss_pred CeecccChHhhHHHHHHHHHHHhccCCCEEEEEEcCC------CCCChHH--HHHH-HHHhCCCeEEEEccCCCCccHHH
Confidence 689999987 6788877664 48999999998 4433322 1111 11111000 0011124567888
Q ss_pred ceeeEEEeeEEeeeecCCCcccCCC
Q 017862 92 CFGYMVSKKKYVYTIDDDCFVAKDP 116 (365)
Q Consensus 92 N~GYL~A~a~~I~~~DDDn~P~~d~ 116 (365)
|.|...|..+||+++|+|+.+.+++
T Consensus 72 n~g~~~a~gd~i~~lD~D~~~~~~~ 96 (185)
T cd04179 72 RAGFKAARGDIVVTMDADLQHPPED 96 (185)
T ss_pred HHHHHHhcCCEEEEEeCCCCCCHHH
Confidence 9999999999999999999987754
No 29
>PRK10063 putative glycosyl transferase; Provisional
Probab=96.75 E-value=0.00065 Score=64.42 Aligned_cols=88 Identities=15% Similarity=0.124 Sum_probs=56.0
Q ss_pred CeEEEEcCcCCh----hHHHHhhhc----cCCeEEEEEecCCCCCCccCCCCcc-ccccchhhhhhhhcCCcccCCCCCc
Q 017862 18 ELDIVIPTIRNL----DFLEQWRPF----FQAYHLIIVQDGDPSKTIKVPEGFD-YELYNRNDINRILGPKASCISFKDS 88 (365)
Q Consensus 18 ~i~IVItTI~~p----~~l~~~r~~----~~~~~lVVV~D~~~~~~~ktP~g~~-~~~~~~~~qe~~l~~~~~~lP~~s~ 88 (365)
.++|||||+++. ++|+++.++ ...+++|||.|+ .+..+.+ .+-+....+-++.. .-..+-+
T Consensus 2 ~vSVIi~~yN~~~~l~~~l~sl~~~~~~~~~~~EiIVvDdg------StD~t~~i~~~~~~~~~i~~i~----~~~~G~~ 71 (248)
T PRK10063 2 LLSVITVAFRNLEGIVKTHASLRHLAQDPGISFEWIVVDGG------SNDGTREFLENLNGIFNLRFVS----EPDNGIY 71 (248)
T ss_pred eEEEEEEeCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEECc------CcccHHHHHHHhcccCCEEEEE----CCCCCHH
Confidence 479999999977 566666432 357999999998 4433322 11111100001111 1124567
Q ss_pred cccceeeEEEeeEEeeeecCCCcccCC
Q 017862 89 ACRCFGYMVSKKKYVYTIDDDCFVAKD 115 (365)
Q Consensus 89 arrN~GYL~A~a~~I~~~DDDn~P~~d 115 (365)
+.+|.|.-.|..+||+++|.|....++
T Consensus 72 ~A~N~Gi~~a~g~~v~~ld~DD~~~~~ 98 (248)
T PRK10063 72 DAMNKGIAMAQGRFALFLNSGDIFHQD 98 (248)
T ss_pred HHHHHHHHHcCCCEEEEEeCCcccCcC
Confidence 789999999999999999977776663
No 30
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.
Probab=96.68 E-value=0.00092 Score=67.19 Aligned_cols=100 Identities=14% Similarity=0.150 Sum_probs=60.5
Q ss_pred CCCeEEEEcCcCCh----hHHHHhhhc-cC-CeEEEEEecCCCCCCccCCCCcc-ccccchhhhhhhhcCCcccC-----
Q 017862 16 KDELDIVIPTIRNL----DFLEQWRPF-FQ-AYHLIIVQDGDPSKTIKVPEGFD-YELYNRNDINRILGPKASCI----- 83 (365)
Q Consensus 16 ~~~i~IVItTI~~p----~~l~~~r~~-~~-~~~lVVV~D~~~~~~~ktP~g~~-~~~~~~~~qe~~l~~~~~~l----- 83 (365)
.-.++||||++++. +||+++.++ .+ .+++|||.|. .+..+.+ .+-+...... .....++
T Consensus 39 ~p~VSVIIpa~Ne~~~L~~~L~sL~~q~yp~~~eIIVVDd~------StD~T~~i~~~~~~~~~~---~~~i~vi~~~~~ 109 (384)
T TIGR03469 39 WPAVVAVVPARNEADVIGECVTSLLEQDYPGKLHVILVDDH------STDGTADIARAAARAYGR---GDRLTVVSGQPL 109 (384)
T ss_pred CCCEEEEEecCCcHhHHHHHHHHHHhCCCCCceEEEEEeCC------CCCcHHHHHHHHHHhcCC---CCcEEEecCCCC
Confidence 34699999999977 677777655 33 6899999998 5544433 1111111000 0011111
Q ss_pred CCC---CccccceeeEEEe-----eEEeeeecCCCcccCCCCCcccchh
Q 017862 84 SFK---DSACRCFGYMVSK-----KKYVYTIDDDCFVAKDPSGKEINAL 124 (365)
Q Consensus 84 P~~---s~arrN~GYL~A~-----a~~I~~~DDDn~P~~d~~g~~~d~~ 124 (365)
|.+ -....|.|.-.|. .+||+++|+|+.+.++++.+.+..+
T Consensus 110 ~~g~~Gk~~A~n~g~~~A~~~~~~gd~llflDaD~~~~p~~l~~lv~~~ 158 (384)
T TIGR03469 110 PPGWSGKLWAVSQGIAAARTLAPPADYLLLTDADIAHGPDNLARLVARA 158 (384)
T ss_pred CCCCcchHHHHHHHHHHHhccCCCCCEEEEECCCCCCChhHHHHHHHHH
Confidence 111 1124577888888 8999999999999887544444333
No 31
>PRK11204 N-glycosyltransferase; Provisional
Probab=96.67 E-value=0.00047 Score=69.24 Aligned_cols=92 Identities=14% Similarity=0.292 Sum_probs=57.6
Q ss_pred CeEEEEcCcCCh----hHHHHhhhc-cCCeEEEEEecCCCCCCccCCCCcc-ccccchhhhh-hhhcCCcccCCCCCccc
Q 017862 18 ELDIVIPTIRNL----DFLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGFD-YELYNRNDIN-RILGPKASCISFKDSAC 90 (365)
Q Consensus 18 ~i~IVItTI~~p----~~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~~-~~~~~~~~qe-~~l~~~~~~lP~~s~ar 90 (365)
.++||||++++. +|++++.++ .+.+++|||.|+ .+++..+ .+-+.....+ +...... .-+-...
T Consensus 55 ~vsViIp~yne~~~i~~~l~sl~~q~yp~~eiiVvdD~------s~d~t~~~l~~~~~~~~~v~~i~~~~---n~Gka~a 125 (420)
T PRK11204 55 GVSILVPCYNEGENVEETISHLLALRYPNYEVIAINDG------SSDNTGEILDRLAAQIPRLRVIHLAE---NQGKANA 125 (420)
T ss_pred CEEEEEecCCCHHHHHHHHHHHHhCCCCCeEEEEEECC------CCccHHHHHHHHHHhCCcEEEEEcCC---CCCHHHH
Confidence 499999999987 566666544 568999999998 5554432 1111110000 0000000 1223445
Q ss_pred cceeeEEEeeEEeeeecCCCcccCCCCC
Q 017862 91 RCFGYMVSKKKYVYTIDDDCFVAKDPSG 118 (365)
Q Consensus 91 rN~GYL~A~a~~I~~~DDDn~P~~d~~g 118 (365)
.|.|.-.|..+||+.+|+|+.+.++.+.
T Consensus 126 ln~g~~~a~~d~i~~lDaD~~~~~d~L~ 153 (420)
T PRK11204 126 LNTGAAAARSEYLVCIDGDALLDPDAAA 153 (420)
T ss_pred HHHHHHHcCCCEEEEECCCCCCChhHHH
Confidence 6788777889999999999999886433
No 32
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
Probab=96.64 E-value=0.00034 Score=62.18 Aligned_cols=86 Identities=15% Similarity=0.148 Sum_probs=50.7
Q ss_pred EEEcCcCCh----hHHHHhhhc-cCCeEEEEEecCCCCCCccCCCCcc-ccccchhhhhhhhcCCcccCCCCCcccccee
Q 017862 21 IVIPTIRNL----DFLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGFD-YELYNRNDINRILGPKASCISFKDSACRCFG 94 (365)
Q Consensus 21 IVItTI~~p----~~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~~-~~~~~~~~qe~~l~~~~~~lP~~s~arrN~G 94 (365)
|||||+++. +||+++.++ .+.+++|||.|. .+..... ..-+.....-..+. .--+.+....+|.|
T Consensus 1 viI~~~n~~~~l~~~l~sl~~q~~~~~eiiivD~~------s~d~t~~~~~~~~~~~~i~~~~---~~~n~g~~~~~n~~ 71 (202)
T cd04185 1 AVVVTYNRLDLLKECLDALLAQTRPPDHIIVIDNA------STDGTAEWLTSLGDLDNIVYLR---LPENLGGAGGFYEG 71 (202)
T ss_pred CEEEeeCCHHHHHHHHHHHHhccCCCceEEEEECC------CCcchHHHHHHhcCCCceEEEE---CccccchhhHHHHH
Confidence 689999987 566666655 457899999988 4443322 11111000000000 00123334456777
Q ss_pred eEEEe---eEEeeeecCCCcccCC
Q 017862 95 YMVSK---KKYVYTIDDDCFVAKD 115 (365)
Q Consensus 95 YL~A~---a~~I~~~DDDn~P~~d 115 (365)
...|. .+|++++|+|+.+.++
T Consensus 72 ~~~a~~~~~d~v~~ld~D~~~~~~ 95 (202)
T cd04185 72 VRRAYELGYDWIWLMDDDAIPDPD 95 (202)
T ss_pred HHHHhccCCCEEEEeCCCCCcChH
Confidence 66553 7899999999999885
No 33
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex. Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we
Probab=96.58 E-value=0.00099 Score=60.89 Aligned_cols=89 Identities=16% Similarity=0.240 Sum_probs=52.2
Q ss_pred CeEEEEcCcCCh----hHHHHhhhc-c--CCeEEEEEecCCCCCCccCCCCccccccchhhhhhhh--cCCcccCCC---
Q 017862 18 ELDIVIPTIRNL----DFLEQWRPF-F--QAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRIL--GPKASCISF--- 85 (365)
Q Consensus 18 ~i~IVItTI~~p----~~l~~~r~~-~--~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l--~~~~~~lP~--- 85 (365)
.+.||||++++. +||+++..+ . ..+++|||.|. .+ .... +.. +.++... +.....+..
T Consensus 2 ~vSViIp~yNe~~~l~~~L~sl~~q~~~~~~~eIiVvD~s------~D-~t~~--~~~-~~~~~~~~~~~~i~~~~~~~~ 71 (232)
T cd06437 2 MVTVQLPVFNEKYVVERLIEAACALDYPKDRLEIQVLDDS------TD-ETVR--LAR-EIVEEYAAQGVNIKHVRRADR 71 (232)
T ss_pred ceEEEEecCCcHHHHHHHHHHHHhcCCCccceEEEEEECC------CC-cHHH--HHH-HHHHHHhhcCCceEEEECCCC
Confidence 389999999988 566666544 2 34788888665 22 1222 100 0011110 111111111
Q ss_pred -C-CccccceeeEEEeeEEeeeecCCCcccCCC
Q 017862 86 -K-DSACRCFGYMVSKKKYVYTIDDDCFVAKDP 116 (365)
Q Consensus 86 -~-s~arrN~GYL~A~a~~I~~~DDDn~P~~d~ 116 (365)
+ ....+|.|.-.|..+||+++|.|+.+.+++
T Consensus 72 ~G~k~~a~n~g~~~a~~~~i~~~DaD~~~~~~~ 104 (232)
T cd06437 72 TGYKAGALAEGMKVAKGEYVAIFDADFVPPPDF 104 (232)
T ss_pred CCCchHHHHHHHHhCCCCEEEEEcCCCCCChHH
Confidence 1 134578898888899999999999998864
No 34
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
Probab=96.52 E-value=0.00049 Score=62.42 Aligned_cols=85 Identities=13% Similarity=0.070 Sum_probs=51.4
Q ss_pred EEEcCcCCh-h----HHHHhhhccCCeEEEEEecCCCCCCccCCCCccccccchhhhhh-hhcCCcccCCCCCcccccee
Q 017862 21 IVIPTIRNL-D----FLEQWRPFFQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINR-ILGPKASCISFKDSACRCFG 94 (365)
Q Consensus 21 IVItTI~~p-~----~l~~~r~~~~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~-~l~~~~~~lP~~s~arrN~G 94 (365)
+||||+++. + ||+++.++ .+++|||.|. .+++......+ .+... ++-... ..+-.+.+|.|
T Consensus 1 ~vI~~yn~~~~~l~~~l~sl~~q--~~~iivvDn~------s~~~~~~~~~~--~~~~i~~i~~~~---n~G~~~a~N~g 67 (237)
T cd02526 1 AVVVTYNPDLSKLKELLAALAEQ--VDKVVVVDNS------SGNDIELRLRL--NSEKIELIHLGE---NLGIAKALNIG 67 (237)
T ss_pred CEEEEecCCHHHHHHHHHHHhcc--CCEEEEEeCC------CCccHHHHhhc--cCCcEEEEECCC---ceehHHhhhHH
Confidence 589999966 4 55554443 6899999887 44332111111 00000 011001 24456778888
Q ss_pred eEEEee---EEeeeecCCCcccCCCCC
Q 017862 95 YMVSKK---KYVYTIDDDCFVAKDPSG 118 (365)
Q Consensus 95 YL~A~a---~~I~~~DDDn~P~~d~~g 118 (365)
.-.|.. +||+++|+|+.+.++++.
T Consensus 68 ~~~a~~~~~d~v~~lD~D~~~~~~~l~ 94 (237)
T cd02526 68 IKAALENGADYVLLFDQDSVPPPDMVE 94 (237)
T ss_pred HHHHHhCCCCEEEEECCCCCcCHhHHH
Confidence 888765 999999999999886433
No 35
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional
Probab=96.49 E-value=0.00062 Score=67.29 Aligned_cols=93 Identities=12% Similarity=0.216 Sum_probs=57.9
Q ss_pred CCCeEEEEcCcCCh----hHHHHhhhc----cCCeEEEEEecCCCCCCccCCCCccc-cccchhhhhhhhcCCcccCCCC
Q 017862 16 KDELDIVIPTIRNL----DFLEQWRPF----FQAYHLIIVQDGDPSKTIKVPEGFDY-ELYNRNDINRILGPKASCISFK 86 (365)
Q Consensus 16 ~~~i~IVItTI~~p----~~l~~~r~~----~~~~~lVVV~D~~~~~~~ktP~g~~~-~~~~~~~qe~~l~~~~~~lP~~ 86 (365)
..+++||||++++. ++++++.+. ...+++|||.|+ .+..+++. .-+......++.. ....-.++
T Consensus 5 ~~~vSVVIP~yNE~~~i~~~l~~l~~~~~~~~~~~EIIvVDDg------S~D~T~~il~~~~~~~~~~v~~-i~~~~n~G 77 (325)
T PRK10714 5 IKKVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDG------SSDNSAEMLVEAAQAPDSHIVA-ILLNRNYG 77 (325)
T ss_pred CCeEEEEEcccCchhhHHHHHHHHHHHHHhCCCCEEEEEEeCC------CCCcHHHHHHHHHhhcCCcEEE-EEeCCCCC
Confidence 34699999999987 566665432 357999999998 44433321 1111000000100 00011355
Q ss_pred CccccceeeEEEeeEEeeeecCCCcccCC
Q 017862 87 DSACRCFGYMVSKKKYVYTIDDDCFVAKD 115 (365)
Q Consensus 87 s~arrN~GYL~A~a~~I~~~DDDn~P~~d 115 (365)
..++.+.|+..|.++||+.+|.|....++
T Consensus 78 ~~~A~~~G~~~A~gd~vv~~DaD~q~~p~ 106 (325)
T PRK10714 78 QHSAIMAGFSHVTGDLIITLDADLQNPPE 106 (325)
T ss_pred HHHHHHHHHHhCCCCEEEEECCCCCCCHH
Confidence 66778889989999999999999997664
No 36
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=96.48 E-value=0.00079 Score=61.30 Aligned_cols=91 Identities=12% Similarity=0.172 Sum_probs=53.5
Q ss_pred EEEEcCcCCh-h----HHHHhhhc-cCCeEEEEEecCCCCCCccCCCCc-c-c-cccchhhhhhhhcCCcccC-CCCC-c
Q 017862 20 DIVIPTIRNL-D----FLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGF-D-Y-ELYNRNDINRILGPKASCI-SFKD-S 88 (365)
Q Consensus 20 ~IVItTI~~p-~----~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~-~-~-~~~~~~~qe~~l~~~~~~l-P~~s-~ 88 (365)
+||||++++. + +|+.+..+ .+.+++|||.|. .+.... . . ++....+ .++. ....- ..+. .
T Consensus 1 siiip~~ne~~~~l~~~l~sl~~q~~~~~eiiVvdd~------s~D~t~~~~i~~~~~~~~-~~i~--~i~~~~~~G~~~ 71 (236)
T cd06435 1 SIHVPCYEEPPEMVKETLDSLAALDYPNFEVIVIDNN------TKDEALWKPVEAHCAQLG-ERFR--FFHVEPLPGAKA 71 (236)
T ss_pred CeeEeeCCCcHHHHHHHHHHHHhCCCCCcEEEEEeCC------CCchhHHHHHHHHHHHhC-CcEE--EEEcCCCCCCch
Confidence 5899999974 4 55555444 467999999988 443321 1 0 0100000 0000 00000 1222 5
Q ss_pred cccceeeEEEe--eEEeeeecCCCcccCCCCCc
Q 017862 89 ACRCFGYMVSK--KKYVYTIDDDCFVAKDPSGK 119 (365)
Q Consensus 89 arrN~GYL~A~--a~~I~~~DDDn~P~~d~~g~ 119 (365)
+..|.|.-.|. .+||+++|+|+.+.++++..
T Consensus 72 ~a~n~g~~~a~~~~d~i~~lD~D~~~~~~~l~~ 104 (236)
T cd06435 72 GALNYALERTAPDAEIIAVIDADYQVEPDWLKR 104 (236)
T ss_pred HHHHHHHHhcCCCCCEEEEEcCCCCcCHHHHHH
Confidence 66899988776 69999999999998865443
No 37
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1. A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.
Probab=96.46 E-value=0.00041 Score=60.71 Aligned_cols=89 Identities=19% Similarity=0.269 Sum_probs=53.7
Q ss_pred EEEcCcCCh----hHHHHhhhc----cCCeEEEEEecCCCCCCccCCCCccc-cccchhhhh-hhhcCCcccCCCCCccc
Q 017862 21 IVIPTIRNL----DFLEQWRPF----FQAYHLIIVQDGDPSKTIKVPEGFDY-ELYNRNDIN-RILGPKASCISFKDSAC 90 (365)
Q Consensus 21 IVItTI~~p----~~l~~~r~~----~~~~~lVVV~D~~~~~~~ktP~g~~~-~~~~~~~qe-~~l~~~~~~lP~~s~ar 90 (365)
|||||+++. ++|+.++.+ ...+++|||.|. .+...-.. .-+.....+ ..+.. .-+.+..+.
T Consensus 1 viIp~~n~~~~l~~~l~sl~~~~~~~~~~~eiivvdd~------s~d~t~~~~~~~~~~~~~i~~i~~---~~n~G~~~a 71 (181)
T cd04187 1 IVVPVYNEEENLPELYERLKAVLESLGYDYEIIFVDDG------STDRTLEILRELAARDPRVKVIRL---SRNFGQQAA 71 (181)
T ss_pred CEEeecCchhhHHHHHHHHHHHHHhcCCCeEEEEEeCC------CCccHHHHHHHHHhhCCCEEEEEe---cCCCCcHHH
Confidence 689999987 455666544 357899999988 44332110 001100000 00110 113455566
Q ss_pred cceeeEEEeeEEeeeecCCCcccCCCCC
Q 017862 91 RCFGYMVSKKKYVYTIDDDCFVAKDPSG 118 (365)
Q Consensus 91 rN~GYL~A~a~~I~~~DDDn~P~~d~~g 118 (365)
.|.|...|..+||+++|+|+.+.++++.
T Consensus 72 ~n~g~~~a~~d~i~~~D~D~~~~~~~l~ 99 (181)
T cd04187 72 LLAGLDHARGDAVITMDADLQDPPELIP 99 (181)
T ss_pred HHHHHHhcCCCEEEEEeCCCCCCHHHHH
Confidence 7778888889999999999998775433
No 38
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI. This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano
Probab=96.40 E-value=0.001 Score=66.60 Aligned_cols=92 Identities=10% Similarity=0.072 Sum_probs=53.3
Q ss_pred CCeEEEEcCcCCh----hHHHHhhhc-cCCeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCcccC----CC--
Q 017862 17 DELDIVIPTIRNL----DFLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCI----SF-- 85 (365)
Q Consensus 17 ~~i~IVItTI~~p----~~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~l----P~-- 85 (365)
-.++||||++++. +||+++..+ .+.+++|||.|. .+....+ +... -+++........+ |.
T Consensus 41 p~VSViiP~~nee~~l~~~L~Sl~~q~Yp~~EIivvdd~------s~D~t~~--iv~~-~~~~~p~~~i~~v~~~~~~G~ 111 (373)
T TIGR03472 41 PPVSVLKPLHGDEPELYENLASFCRQDYPGFQMLFGVQD------PDDPALA--VVRR-LRADFPDADIDLVIDARRHGP 111 (373)
T ss_pred CCeEEEEECCCCChhHHHHHHHHHhcCCCCeEEEEEeCC------CCCcHHH--HHHH-HHHhCCCCceEEEECCCCCCC
Confidence 3499999999965 788877655 577999998877 4433222 1110 0111111111111 11
Q ss_pred --CCccccceeeEEEeeEEeeeecCCCcccCCCCC
Q 017862 86 --KDSACRCFGYMVSKKKYVYTIDDDCFVAKDPSG 118 (365)
Q Consensus 86 --~s~arrN~GYL~A~a~~I~~~DDDn~P~~d~~g 118 (365)
|-.++.| +.-.|..|||+++|+|+.+.++++.
T Consensus 112 ~~K~~~l~~-~~~~a~ge~i~~~DaD~~~~p~~L~ 145 (373)
T TIGR03472 112 NRKVSNLIN-MLPHARHDILVIADSDISVGPDYLR 145 (373)
T ss_pred ChHHHHHHH-HHHhccCCEEEEECCCCCcChhHHH
Confidence 1122333 2445568999999999999886433
No 39
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional
Probab=96.36 E-value=0.0014 Score=65.02 Aligned_cols=92 Identities=23% Similarity=0.354 Sum_probs=58.5
Q ss_pred CCCeEEEEcCcCCh----hHHHHhhhccC---------CeEEEEEecCCCCCCccCCCCccc-cccchhhhhhhhcCCcc
Q 017862 16 KDELDIVIPTIRNL----DFLEQWRPFFQ---------AYHLIIVQDGDPSKTIKVPEGFDY-ELYNRNDINRILGPKAS 81 (365)
Q Consensus 16 ~~~i~IVItTI~~p----~~l~~~r~~~~---------~~~lVVV~D~~~~~~~ktP~g~~~-~~~~~~~qe~~l~~~~~ 81 (365)
.-.++||||++++. ++|++..+++. .+++|||.|+ .+..+.+. .-+..... -......
T Consensus 69 ~~~isVVIP~yNe~~~i~~~L~~l~~~~~~~~~~~~~~~~EIIVVDDg------StD~T~~i~~~~~~~~~--~~~~~i~ 140 (333)
T PTZ00260 69 DVDLSIVIPAYNEEDRLPKMLKETIKYLESRSRKDPKFKYEIIIVNDG------SKDKTLKVAKDFWRQNI--NPNIDIR 140 (333)
T ss_pred CeEEEEEEeeCCCHHHHHHHHHHHHHHHHhhhccCCCCCEEEEEEeCC------CCCchHHHHHHHHHhcC--CCCCcEE
Confidence 34599999999976 56666544332 6999999998 55444331 11211110 0000011
Q ss_pred c----CCCCCccccceeeEEEeeEEeeeecCCCcccCC
Q 017862 82 C----ISFKDSACRCFGYMVSKKKYVYTIDDDCFVAKD 115 (365)
Q Consensus 82 ~----lP~~s~arrN~GYL~A~a~~I~~~DDDn~P~~d 115 (365)
+ -+.+..+..|.|+..|.++||+.+|.|+....+
T Consensus 141 vi~~~~N~G~~~A~~~Gi~~a~gd~I~~~DaD~~~~~~ 178 (333)
T PTZ00260 141 LLSLLRNKGKGGAVRIGMLASRGKYILMVDADGATDID 178 (333)
T ss_pred EEEcCCCCChHHHHHHHHHHccCCEEEEEeCCCCCCHH
Confidence 1 124566778889998999999999999987765
No 40
>PRK14583 hmsR N-glycosyltransferase; Provisional
Probab=96.31 E-value=0.00088 Score=68.60 Aligned_cols=87 Identities=15% Similarity=0.296 Sum_probs=56.5
Q ss_pred CeEEEEcCcCCh----hHHHHhhhc-cCCeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCcccC----CCCCc
Q 017862 18 ELDIVIPTIRNL----DFLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCI----SFKDS 88 (365)
Q Consensus 18 ~i~IVItTI~~p----~~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~l----P~~s~ 88 (365)
.++|+||++++. ++|+++.++ .+++++|||.|+ .+.+... ......++ ......+ +.+-.
T Consensus 76 ~vsViIP~yNE~~~i~~~l~sll~q~yp~~eIivVdDg------s~D~t~~--~~~~~~~~---~~~v~vv~~~~n~Gka 144 (444)
T PRK14583 76 LVSILVPCFNEGLNARETIHAALAQTYTNIEVIAINDG------SSDDTAQ--VLDALLAE---DPRLRVIHLAHNQGKA 144 (444)
T ss_pred cEEEEEEeCCCHHHHHHHHHHHHcCCCCCeEEEEEECC------CCccHHH--HHHHHHHh---CCCEEEEEeCCCCCHH
Confidence 499999999988 566666544 578999999998 5544322 11110000 0001111 12334
Q ss_pred cccceeeEEEeeEEeeeecCCCcccCC
Q 017862 89 ACRCFGYMVSKKKYVYTIDDDCFVAKD 115 (365)
Q Consensus 89 arrN~GYL~A~a~~I~~~DDDn~P~~d 115 (365)
...|.|...|..|||+.+|.|+.+.++
T Consensus 145 ~AlN~gl~~a~~d~iv~lDAD~~~~~d 171 (444)
T PRK14583 145 IALRMGAAAARSEYLVCIDGDALLDKN 171 (444)
T ss_pred HHHHHHHHhCCCCEEEEECCCCCcCHH
Confidence 456888888889999999999999885
No 41
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A.
Probab=96.27 E-value=0.00062 Score=61.55 Aligned_cols=89 Identities=18% Similarity=0.255 Sum_probs=43.5
Q ss_pred eEEEEcCcCCh----hHHHHhhhc-cCCeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCcccCCCCC------
Q 017862 19 LDIVIPTIRNL----DFLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCISFKD------ 87 (365)
Q Consensus 19 i~IVItTI~~p----~~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~lP~~s------ 87 (365)
+.||||+++++ ++|+++..+ .+++++|||.|. .+++..+ ... +-+++......++++...
T Consensus 3 v~Vvip~~~~~~~l~~~l~sl~~~~~~~~~v~vvd~~------~~~~~~~--~~~-~~~~~~~~~~v~vi~~~~~~g~~~ 73 (228)
T PF13641_consen 3 VSVVIPAYNEDDVLRRCLESLLAQDYPRLEVVVVDDG------SDDETAE--ILR-ALAARYPRVRVRVIRRPRNPGPGG 73 (228)
T ss_dssp EEEE--BSS-HHHHHHHHHHHTTSHHHTEEEEEEEE-------SSS-GCT--THH-HHHHTTGG-GEEEEE----HHHHH
T ss_pred EEEEEEecCCHHHHHHHHHHHHcCCCCCeEEEEEECC------CChHHHH--HHH-HHHHHcCCCceEEeecCCCCCcch
Confidence 78999999987 566655433 478999999987 4433321 100 001111111122222211
Q ss_pred -ccccceeeEEEeeEEeeeecCCCcccCCC
Q 017862 88 -SACRCFGYMVSKKKYVYTIDDDCFVAKDP 116 (365)
Q Consensus 88 -~arrN~GYL~A~a~~I~~~DDDn~P~~d~ 116 (365)
....|.|.-.+..+||+++|||+.+.+++
T Consensus 74 k~~a~n~~~~~~~~d~i~~lD~D~~~~p~~ 103 (228)
T PF13641_consen 74 KARALNEALAAARGDYILFLDDDTVLDPDW 103 (228)
T ss_dssp HHHHHHHHHHH---SEEEEE-SSEEE-CHH
T ss_pred HHHHHHHHHHhcCCCEEEEECCCcEECHHH
Confidence 12235666556699999999999997753
No 42
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111. Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).
Probab=96.18 E-value=0.0019 Score=66.12 Aligned_cols=90 Identities=19% Similarity=0.317 Sum_probs=55.4
Q ss_pred CeEEEEcCcCCh----hHHHHhhhc-c--CCeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCcccCCC--CCc
Q 017862 18 ELDIVIPTIRNL----DFLEQWRPF-F--QAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCISF--KDS 88 (365)
Q Consensus 18 ~i~IVItTI~~p----~~l~~~r~~-~--~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~lP~--~s~ 88 (365)
.++||||++++. +||+++..+ . +.+++|||.|+ .+.+..+ ++.. .+++...-....++- +-.
T Consensus 50 ~vsVIIP~yNe~~~l~~~l~sl~~q~yp~~~~eIiVVDd~------StD~T~~--il~~-~~~~~~~v~v~~~~~~~Gka 120 (439)
T TIGR03111 50 DITIIIPVYNSEDTLFNCIESIYNQTYPIELIDIILANNQ------STDDSFQ--VFCR-AQNEFPGLSLRYMNSDQGKA 120 (439)
T ss_pred CEEEEEEeCCChHHHHHHHHHHHhcCCCCCCeEEEEEECC------CChhHHH--HHHH-HHHhCCCeEEEEeCCCCCHH
Confidence 499999999988 566666554 3 34789999988 5544432 1110 011111111111222 223
Q ss_pred cccceeeEEEeeEEeeeecCCCcccCCC
Q 017862 89 ACRCFGYMVSKKKYVYTIDDDCFVAKDP 116 (365)
Q Consensus 89 arrN~GYL~A~a~~I~~~DDDn~P~~d~ 116 (365)
...|.|.-.|..+||+.+|.|+.|.++.
T Consensus 121 ~AlN~gl~~s~g~~v~~~DaD~~~~~d~ 148 (439)
T TIGR03111 121 KALNAAIYNSIGKYIIHIDSDGKLHKDA 148 (439)
T ss_pred HHHHHHHHHccCCEEEEECCCCCcChHH
Confidence 4568888888899999999999998753
No 43
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=96.04 E-value=0.0014 Score=60.56 Aligned_cols=83 Identities=18% Similarity=0.181 Sum_probs=53.0
Q ss_pred eEEEEcCcCCh----hHHHHhhhccCCeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCcccCCCCCcccccee
Q 017862 19 LDIVIPTIRNL----DFLEQWRPFFQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFG 94 (365)
Q Consensus 19 i~IVItTI~~p----~~l~~~r~~~~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~lP~~s~arrN~G 94 (365)
++|||||+++. +||+++..+. .++|||.|+ .+..+.+ +.. +...++. +.-..+-.+.+|+|
T Consensus 2 isvii~~~Ne~~~l~~~l~sl~~~~--~eiivvD~g------StD~t~~--i~~-~~~~~v~----~~~~~g~~~~~n~~ 66 (229)
T cd02511 2 LSVVIITKNEERNIERCLESVKWAV--DEIIVVDSG------STDRTVE--IAK-EYGAKVY----QRWWDGFGAQRNFA 66 (229)
T ss_pred EEEEEEeCCcHHHHHHHHHHHhccc--CEEEEEeCC------CCccHHH--HHH-HcCCEEE----ECCCCChHHHHHHH
Confidence 78999999987 4555554321 389999988 4433322 110 0000111 11113345788999
Q ss_pred eEEEeeEEeeeecCCCcccCCC
Q 017862 95 YMVSKKKYVYTIDDDCFVAKDP 116 (365)
Q Consensus 95 YL~A~a~~I~~~DDDn~P~~d~ 116 (365)
.-.|..+||+++|.|..+.++.
T Consensus 67 ~~~a~~d~vl~lDaD~~~~~~~ 88 (229)
T cd02511 67 LELATNDWVLSLDADERLTPEL 88 (229)
T ss_pred HHhCCCCEEEEEeCCcCcCHHH
Confidence 9889999999999999987753
No 44
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is predicted to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was predicted to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.
Probab=95.92 E-value=0.0011 Score=58.62 Aligned_cols=86 Identities=14% Similarity=0.174 Sum_probs=50.8
Q ss_pred EEEcCcCCh----hHHHHhhhc-c--CCeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCcccCCCCCccccce
Q 017862 21 IVIPTIRNL----DFLEQWRPF-F--QAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCF 93 (365)
Q Consensus 21 IVItTI~~p----~~l~~~r~~-~--~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~lP~~s~arrN~ 93 (365)
||||++++. ++|+++.++ . ..+++|||.|. .+...... ......+-+.- ...-..+-....|.
T Consensus 1 VvIp~~ne~~~i~~~l~sl~~~~~p~~~~eiivvdd~------s~D~t~~~--~~~~~~~~~~~--~~~~~~gk~~aln~ 70 (183)
T cd06438 1 ILIPAHNEEAVIGNTVRSLKAQDYPRELYRIFVVADN------CTDDTAQV--ARAAGATVLER--HDPERRGKGYALDF 70 (183)
T ss_pred CEEeccchHHHHHHHHHHHHhcCCCCcccEEEEEeCC------CCchHHHH--HHHcCCeEEEe--CCCCCCCHHHHHHH
Confidence 799999977 677777554 2 45899999998 44433221 10000000000 00001123344667
Q ss_pred eeEEEe-----eEEeeeecCCCcccCCC
Q 017862 94 GYMVSK-----KKYVYTIDDDCFVAKDP 116 (365)
Q Consensus 94 GYL~A~-----a~~I~~~DDDn~P~~d~ 116 (365)
|+..|. .+||+++|.|+.+.+++
T Consensus 71 g~~~a~~~~~~~d~v~~~DaD~~~~p~~ 98 (183)
T cd06438 71 GFRHLLNLADDPDAVVVFDADNLVDPNA 98 (183)
T ss_pred HHHHHHhcCCCCCEEEEEcCCCCCChhH
Confidence 766553 89999999999998864
No 45
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional
Probab=95.88 E-value=0.0025 Score=62.63 Aligned_cols=89 Identities=12% Similarity=0.242 Sum_probs=53.2
Q ss_pred CCCeEEEEcCcCCh----hHHHHhhhcc---CCeEEEEEecCCCCCCccCCCCccc-cccchhhhhhhhcCCcccC---C
Q 017862 16 KDELDIVIPTIRNL----DFLEQWRPFF---QAYHLIIVQDGDPSKTIKVPEGFDY-ELYNRNDINRILGPKASCI---S 84 (365)
Q Consensus 16 ~~~i~IVItTI~~p----~~l~~~r~~~---~~~~lVVV~D~~~~~~~ktP~g~~~-~~~~~~~qe~~l~~~~~~l---P 84 (365)
.-.++||||++++. ++|+++++++ ..+++|||.|+ .+..+.+. .-+.. +... ....+ +
T Consensus 30 ~~~vSVVIPayNee~~I~~~l~sl~~~~~~~~~~EIIVVDDg------StD~T~~ia~~~~~----~v~~-~~~~~~~~~ 98 (306)
T PRK13915 30 GRTVSVVLPALNEEETVGKVVDSIRPLLMEPLVDELIVIDSG------STDATAERAAAAGA----RVVS-REEILPELP 98 (306)
T ss_pred CCCEEEEEecCCcHHHHHHHHHHHHHHhccCCCcEEEEEeCC------CccHHHHHHHHhcc----hhhc-chhhhhccc
Confidence 34699999999987 6777776653 25799999998 44333221 00100 0000 00111 1
Q ss_pred --CCCccccceeeEEEeeEEeeeecCCCc-ccCC
Q 017862 85 --FKDSACRCFGYMVSKKKYVYTIDDDCF-VAKD 115 (365)
Q Consensus 85 --~~s~arrN~GYL~A~a~~I~~~DDDn~-P~~d 115 (365)
.+-.+..|.|+..|.++||+++|.|+. +.++
T Consensus 99 ~n~Gkg~A~~~g~~~a~gd~vv~lDaD~~~~~p~ 132 (306)
T PRK13915 99 PRPGKGEALWRSLAATTGDIVVFVDADLINFDPM 132 (306)
T ss_pred cCCCHHHHHHHHHHhcCCCEEEEEeCccccCCHH
Confidence 122234566777788999999999997 4453
No 46
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine. N-acetyl-glucosamine transferase is responsible for the synthesis of bacteria Poly-beta-1,6-N-acetyl-D-glucosamine (PGA). Poly-beta-1,6-N-acetyl-D-glucosamine is a homopolymer that serves as an adhesion for the maintenance of biofilm structural stability in diverse eubacteria. N-acetyl-glucosamine transferase is the product of gene pgaC. Genetic analysis indicated that all four genes of the pgaABCD locus were required for the PGA production, pgaC being a glycosyltransferase.
Probab=95.57 E-value=0.0047 Score=55.36 Aligned_cols=83 Identities=8% Similarity=0.118 Sum_probs=51.8
Q ss_pred EEEcCcCCh----hHHHHhhhccCCeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCcccC-------CCCCcc
Q 017862 21 IVIPTIRNL----DFLEQWRPFFQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCI-------SFKDSA 89 (365)
Q Consensus 21 IVItTI~~p----~~l~~~r~~~~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~l-------P~~s~a 89 (365)
||||++++. +||+++..+.+.+++|||.|. .++.......+... .....++ ..+-..
T Consensus 1 ViIp~~Ne~~~l~~~l~sl~~~~~~~eIivvdd~------S~D~t~~~~~~~~~------~~~v~~i~~~~~~~~~Gk~~ 68 (191)
T cd06436 1 VLVPCLNEEAVIQRTLASLLRNKPNFLVLVIDDA------SDDDTAGIVRLAIT------DSRVHLLRRHLPNARTGKGD 68 (191)
T ss_pred CEEeccccHHHHHHHHHHHHhCCCCeEEEEEECC------CCcCHHHHHhheec------CCcEEEEeccCCcCCCCHHH
Confidence 799999988 577776655578899999998 55443321111000 0111111 123345
Q ss_pred ccceeeEEEe-----------eEEeeeecCCCcccCC
Q 017862 90 CRCFGYMVSK-----------KKYVYTIDDDCFVAKD 115 (365)
Q Consensus 90 rrN~GYL~A~-----------a~~I~~~DDDn~P~~d 115 (365)
+.|.|+-.|. .+||+++|.|+.+.++
T Consensus 69 aln~g~~~~~~~~~~~g~~~~~d~v~~~DaD~~~~~~ 105 (191)
T cd06436 69 ALNAAYDQIRQILIEEGADPERVIIAVIDADGRLDPN 105 (191)
T ss_pred HHHHHHHHHhhhccccccCCCccEEEEECCCCCcCHh
Confidence 6777766553 2799999999999885
No 47
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin. Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.
Probab=94.92 E-value=0.0093 Score=55.79 Aligned_cols=70 Identities=14% Similarity=0.215 Sum_probs=46.6
Q ss_pred EEEcCcCCh-----hHHHHhhhc-cC----------CeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCcccCC
Q 017862 21 IVIPTIRNL-----DFLEQWRPF-FQ----------AYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCIS 84 (365)
Q Consensus 21 IVItTI~~p-----~~l~~~r~~-~~----------~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~lP 84 (365)
||||.+++. ++|+++..+ .+ .+++|||.|+ -+. ++ .|
T Consensus 1 v~ip~yNE~~~~i~~~l~sv~~q~y~~~~~~~~~~~~~evivv~Dg------s~d------------~~--~g------- 53 (244)
T cd04190 1 VCVTMYNEDEEELARTLDSILKNDYPFCARGGDSWKKIVVCVIFDG------AIK------------KN--RG------- 53 (244)
T ss_pred CEEeeecCCHHHHHHHHHHHHHhhHHHHhcCCCCccEEEEEEEeCC------ccc------------cc--Cc-------
Confidence 789999984 455555444 44 7899999999 222 00 00
Q ss_pred CCCc------cccceeeEEEeeEEeeeecCCCcccCCCCC
Q 017862 85 FKDS------ACRCFGYMVSKKKYVYTIDDDCFVAKDPSG 118 (365)
Q Consensus 85 ~~s~------arrN~GYL~A~a~~I~~~DDDn~P~~d~~g 118 (365)
|.+ ...|-|...|..+||+.+|.|+.+.++.+.
T Consensus 54 -k~~~~~~~~~~~~~~~~~a~~e~i~~~DaD~~~~~~~l~ 92 (244)
T cd04190 54 -KRDSQLWFFNYFCRVLFPDDPEFILLVDADTKFDPDSIV 92 (244)
T ss_pred -chHHHHHHHHHHHHHhhcCCCCEEEEECCCCcCCHhHHH
Confidence 111 122455667789999999999999886433
No 48
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming). Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.
Probab=94.63 E-value=0.022 Score=62.22 Aligned_cols=102 Identities=14% Similarity=0.217 Sum_probs=56.9
Q ss_pred CeEEEEcCcCCh-hHH----HHhhhc-c--CCeEEEEEecCCCCCCccCCCCcccccc-chhhhhhhhc-CCcccC--CC
Q 017862 18 ELDIVIPTIRNL-DFL----EQWRPF-F--QAYHLIIVQDGDPSKTIKVPEGFDYELY-NRNDINRILG-PKASCI--SF 85 (365)
Q Consensus 18 ~i~IVItTI~~p-~~l----~~~r~~-~--~~~~lVVV~D~~~~~~~ktP~g~~~~~~-~~~~qe~~l~-~~~~~l--P~ 85 (365)
.++|||||++++ +.+ ++...+ - +.++++||.|++.-...++|+.+..+.- ...+.+++-. .....+ |-
T Consensus 132 ~VsViIP~yNE~~~iv~~tl~s~~~~dYP~~~~eIiVvDDgStD~t~~~~~~~~~~~~~~~~~~~~l~~~~~v~yi~r~~ 211 (713)
T TIGR03030 132 TVDVFIPTYNEDLEIVATTVLAAKNMDYPADKFRVWILDDGGTDQKRNDPDPEQAEAAQRREELKEFCRKLGVNYITRPR 211 (713)
T ss_pred eeEEEEcCCCCCHHHHHHHHHHHHhCCCCccceEEEEEECcCCccccccchhhhhhhhhhHHHHHHHHHHcCcEEEECCC
Confidence 499999999987 444 343322 2 3789999999843333344433322110 1111111110 011111 22
Q ss_pred CC---ccccceeeEEEeeEEeeeecCCCcccCCCCCc
Q 017862 86 KD---SACRCFGYMVSKKKYVYTIDDDCFVAKDPSGK 119 (365)
Q Consensus 86 ~s---~arrN~GYL~A~a~~I~~~DDDn~P~~d~~g~ 119 (365)
+. ....|.|.-.|.++||..+|.|+.|.++.+..
T Consensus 212 n~~~KAgnLN~al~~a~gd~Il~lDAD~v~~pd~L~~ 248 (713)
T TIGR03030 212 NVHAKAGNINNALKHTDGELILIFDADHVPTRDFLQR 248 (713)
T ss_pred CCCCChHHHHHHHHhcCCCEEEEECCCCCcChhHHHH
Confidence 21 12246777777799999999999998864333
No 49
>KOG2977 consensus Glycosyltransferase [General function prediction only]
Probab=94.04 E-value=0.032 Score=55.11 Aligned_cols=86 Identities=16% Similarity=0.263 Sum_probs=58.5
Q ss_pred CeEEEEcCcCCh--------hHHHHhhh-ccC----CeEEEEEecCCCCCCccCCCCccccc-cc--hhhhhhhhcCCcc
Q 017862 18 ELDIVIPTIRNL--------DFLEQWRP-FFQ----AYHLIIVQDGDPSKTIKVPEGFDYEL-YN--RNDINRILGPKAS 81 (365)
Q Consensus 18 ~i~IVItTI~~p--------~~l~~~r~-~~~----~~~lVVV~D~~~~~~~ktP~g~~~~~-~~--~~~qe~~l~~~~~ 81 (365)
.+.||||+++++ ++++-+.+ ... +|++|||.|+ .+-.+-++++ |+ ..+++-......+
T Consensus 68 ~lsVIVpaynE~~ri~~mldeav~~le~ry~~~~~F~~eiiVvddg------s~d~T~~~a~k~s~K~~~d~irV~~l~~ 141 (323)
T KOG2977|consen 68 YLSVIVPAYNEEGRIGAMLDEAVDYLEKRYLSDKSFTYEIIVVDDG------STDSTVEVALKFSRKLGDDNIRVIKLKK 141 (323)
T ss_pred eeEEEEecCCcccchHHHHHHHHHHHHHHhccCCCCceeEEEeCCC------CchhHHHHHHHHHHHcCcceEEEeehhc
Confidence 689999999987 34433311 133 8999999999 7766655443 33 1222222333345
Q ss_pred cCCCCCccccceeeEEEeeEEeeeecCCCc
Q 017862 82 CISFKDSACRCFGYMVSKKKYVYTIDDDCF 111 (365)
Q Consensus 82 ~lP~~s~arrN~GYL~A~a~~I~~~DDDn~ 111 (365)
-.|.++..| -|.|.++.++|.+.|-|.-
T Consensus 142 nrgKGgAvR--~g~l~~rG~~ilfadAdGa 169 (323)
T KOG2977|consen 142 NRGKGGAVR--KGMLSSRGQKILFADADGA 169 (323)
T ss_pred cCCCCccee--hhhHhccCceEEEEcCCCC
Confidence 577888888 6899999999999998864
No 50
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ].
Probab=93.85 E-value=0.018 Score=55.37 Aligned_cols=33 Identities=24% Similarity=0.498 Sum_probs=30.2
Q ss_pred CCCCCccccceeeEEEeeEEeeeecCCCcccCC
Q 017862 83 ISFKDSACRCFGYMVSKKKYVYTIDDDCFVAKD 115 (365)
Q Consensus 83 lP~~s~arrN~GYL~A~a~~I~~~DDDn~P~~d 115 (365)
.+|+-..+||+|-..|.+++|+++|.||.|.++
T Consensus 72 ~~f~~a~arN~g~~~A~~d~l~flD~D~i~~~~ 104 (281)
T PF10111_consen 72 EPFSRAKARNIGAKYARGDYLIFLDADCIPSPD 104 (281)
T ss_pred CCcCHHHHHHHHHHHcCCCEEEEEcCCeeeCHH
Confidence 357889999999999999999999999999884
No 51
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional
Probab=93.75 E-value=0.014 Score=65.15 Aligned_cols=89 Identities=16% Similarity=0.197 Sum_probs=54.1
Q ss_pred CeEEEEcCcCCh-hHHHH----hhhc---cCCeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCCcccC--CCCC
Q 017862 18 ELDIVIPTIRNL-DFLEQ----WRPF---FQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKASCI--SFKD 87 (365)
Q Consensus 18 ~i~IVItTI~~p-~~l~~----~r~~---~~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~~~~l--P~~s 87 (365)
.++|+|||+|++ +.+++ ...+ .++++++||.|+ .+++.-+. .++ ++ ...+ |-+.
T Consensus 261 ~VsViIPtYNE~~~vv~~tI~a~l~~dYP~~k~EViVVDDg------S~D~t~~l-------a~~-~~--v~yI~R~~n~ 324 (852)
T PRK11498 261 TVDIFVPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDG------GREEFRQF-------AQE-VG--VKYIARPTHE 324 (852)
T ss_pred cEEEEEecCCCcHHHHHHHHHHHHhccCCCCceEEEEEeCC------CChHHHHH-------HHH-CC--cEEEEeCCCC
Confidence 499999999988 44442 2222 246899999999 55443210 000 11 1111 1111
Q ss_pred ---ccccceeeEEEeeEEeeeecCCCcccCCCCCcccc
Q 017862 88 ---SACRCFGYMVSKKKYVYTIDDDCFVAKDPSGKEIN 122 (365)
Q Consensus 88 ---~arrN~GYL~A~a~~I~~~DDDn~P~~d~~g~~~d 122 (365)
.+..|.|.-.+..|||+.+|.|+.|.++.+.+.+.
T Consensus 325 ~gKAGnLN~aL~~a~GEyIavlDAD~ip~pdfL~~~V~ 362 (852)
T PRK11498 325 HAKAGNINNALKYAKGEFVAIFDCDHVPTRSFLQMTMG 362 (852)
T ss_pred cchHHHHHHHHHhCCCCEEEEECCCCCCChHHHHHHHH
Confidence 22347777777899999999999998864443333
No 52
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it als
Probab=91.99 E-value=0.077 Score=42.72 Aligned_cols=87 Identities=17% Similarity=0.280 Sum_probs=50.9
Q ss_pred EEEcCcCCh----hHHHHhhhc-cCCeEEEEEecCCCCCCccCCCCccccccchhhhhhh-hcCCcccCCCCCcccccee
Q 017862 21 IVIPTIRNL----DFLEQWRPF-FQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRI-LGPKASCISFKDSACRCFG 94 (365)
Q Consensus 21 IVItTI~~p----~~l~~~r~~-~~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~-l~~~~~~lP~~s~arrN~G 94 (365)
||||+.+++ .+|+++.++ ...++++||.|. .+++... .......+.. .......-+.+....+|.|
T Consensus 1 iii~~~~~~~~l~~~l~s~~~~~~~~~~i~i~~~~------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 72 (156)
T cd00761 1 VIIPAYNEEPYLERCLESLLAQTYPNFEVIVVDDG------STDGTLE--ILEEYAKKDPRVIRVINEENQGLAAARNAG 72 (156)
T ss_pred CEEeecCcHHHHHHHHHHHHhCCccceEEEEEeCC------CCccHHH--HHHHHHhcCCCeEEEEecCCCChHHHHHHH
Confidence 689999987 455555444 358899999998 4443322 1111100000 0001122234445556666
Q ss_pred eEEEeeEEeeeecCCCcccCC
Q 017862 95 YMVSKKKYVYTIDDDCFVAKD 115 (365)
Q Consensus 95 YL~A~a~~I~~~DDDn~P~~d 115 (365)
...+..+|++.+|+|+.+.++
T Consensus 73 ~~~~~~d~v~~~d~D~~~~~~ 93 (156)
T cd00761 73 LKAARGEYILFLDADDLLLPD 93 (156)
T ss_pred HHHhcCCEEEEECCCCccCcc
Confidence 666678999999999998775
No 53
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. Alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (GLCNAC-T I , GNT-I) transfers N-acetyl-D-glucosamine from UDP to high-mannose glycoprotein N-oligosaccharide, an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides. The enzyme is an integral membrane protein localized to the Golgi apparatus. The catalytic domain is located at the C-terminus. These proteins are members of the glycosy transferase family 13.
Probab=91.04 E-value=0.19 Score=50.54 Aligned_cols=32 Identities=16% Similarity=0.357 Sum_probs=25.7
Q ss_pred eEEEEcCcCCh----hHHHHhhh---ccCCeEEEEEecC
Q 017862 19 LDIVIPTIRNL----DFLEQWRP---FFQAYHLIIVQDG 50 (365)
Q Consensus 19 i~IVItTI~~p----~~l~~~r~---~~~~~~lVVV~D~ 50 (365)
+-|||.++++| ++|+++.+ ..+.++|+|..|+
T Consensus 2 ~PVlv~ayNRp~~l~r~LesLl~~~p~~~~~~liIs~DG 40 (334)
T cd02514 2 IPVLVIACNRPDYLRRMLDSLLSYRPSAEKFPIIVSQDG 40 (334)
T ss_pred cCEEEEecCCHHHHHHHHHHHHhccccCCCceEEEEeCC
Confidence 45899999999 57777754 3568899999999
No 54
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=90.50 E-value=0.16 Score=50.73 Aligned_cols=89 Identities=22% Similarity=0.374 Sum_probs=55.2
Q ss_pred CCeEEEEcCcCCh-hHHHHh----hhc-cCCeEEEEEecCCCCCCccCCCCcc-ccccchhhhhhhhcCCcccC-C--CC
Q 017862 17 DELDIVIPTIRNL-DFLEQW----RPF-FQAYHLIIVQDGDPSKTIKVPEGFD-YELYNRNDINRILGPKASCI-S--FK 86 (365)
Q Consensus 17 ~~i~IVItTI~~p-~~l~~~----r~~-~~~~~lVVV~D~~~~~~~ktP~g~~-~~~~~~~~qe~~l~~~~~~l-P--~~ 86 (365)
-.++|+||+++++ +.+++. .++ .++++++||.|. .+.+.++ ++-+..+. +.....+ + -+
T Consensus 54 p~vsviiP~ynE~~~~~~~~l~s~~~~dyp~~evivv~d~------~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 122 (439)
T COG1215 54 PKVSVIIPAYNEEPEVLEETLESLLSQDYPRYEVIVVDDG------STDETYEILEELGAEY-----GPNFRVIYPEKKN 122 (439)
T ss_pred CceEEEEecCCCchhhHHHHHHHHHhCCCCCceEEEECCC------CChhHHHHHHHHHhhc-----CcceEEEeccccC
Confidence 5799999999988 365555 333 677899999997 5555544 21111111 0001111 1 11
Q ss_pred C--ccccceeeEEEeeEEeeeecCCCcccCCC
Q 017862 87 D--SACRCFGYMVSKKKYVYTIDDDCFVAKDP 116 (365)
Q Consensus 87 s--~arrN~GYL~A~a~~I~~~DDDn~P~~d~ 116 (365)
. ...=|.|+-.|..++|+.+|-|..|.+|.
T Consensus 123 ~gK~~al~~~l~~~~~d~V~~~DaD~~~~~d~ 154 (439)
T COG1215 123 GGKAGALNNGLKRAKGDVVVILDADTVPEPDA 154 (439)
T ss_pred ccchHHHHHHHhhcCCCEEEEEcCCCCCChhH
Confidence 1 23334556677799999999999999964
No 55
>TIGR01556 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.
Probab=89.32 E-value=0.062 Score=50.87 Aligned_cols=34 Identities=15% Similarity=-0.036 Sum_probs=26.5
Q ss_pred CCCccccceeeEEEe---eEEeeeecCCCcccCCCCC
Q 017862 85 FKDSACRCFGYMVSK---KKYVYTIDDDCFVAKDPSG 118 (365)
Q Consensus 85 ~~s~arrN~GYL~A~---a~~I~~~DDDn~P~~d~~g 118 (365)
.+..+..|.|.-+|. ++||+++|||+.|.++.+.
T Consensus 56 ~G~a~a~N~Gi~~a~~~~~d~i~~lD~D~~~~~~~l~ 92 (281)
T TIGR01556 56 QGIAGAQNQGLDASFRRGVQGVLLLDQDSRPGNAFLA 92 (281)
T ss_pred cchHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHH
Confidence 456778888866663 7999999999999876433
No 56
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=89.03 E-value=0.12 Score=50.20 Aligned_cols=90 Identities=20% Similarity=0.182 Sum_probs=50.2
Q ss_pred CCeEEEEcCcCCh----hHHHHhhhccCCeEEEEEecCCCCCCccCCCCccccccchh-hhh-hhhcCCcccCCCCCccc
Q 017862 17 DELDIVIPTIRNL----DFLEQWRPFFQAYHLIIVQDGDPSKTIKVPEGFDYELYNRN-DIN-RILGPKASCISFKDSAC 90 (365)
Q Consensus 17 ~~i~IVItTI~~p----~~l~~~r~~~~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~-~qe-~~l~~~~~~lP~~s~ar 90 (365)
-++.|||.|++.+ +||++++.+......||+.|. .++++-. +..... ..+ +++..... .+..+-
T Consensus 3 ~~i~~iiv~yn~~~~l~~~l~~l~~~~~~~~~iv~vDn------~s~d~~~-~~~~~~~~~~v~~i~~~~N---lG~agg 72 (305)
T COG1216 3 PKISIIIVTYNRGEDLVECLASLAAQTYPDDVIVVVDN------GSTDGSL-EALKARFFPNVRLIENGEN---LGFAGG 72 (305)
T ss_pred cceEEEEEecCCHHHHHHHHHHHhcCCCCCcEEEEccC------CCCCCCH-HHHHhhcCCcEEEEEcCCC---ccchhh
Confidence 4689999999988 788888777555555544443 2322211 111111 111 11111111 333444
Q ss_pred cceeeEEEeeE---EeeeecCCCcccCCC
Q 017862 91 RCFGYMVSKKK---YVYTIDDDCFVAKDP 116 (365)
Q Consensus 91 rN~GYL~A~a~---~I~~~DDDn~P~~d~ 116 (365)
=|.|-.+|.++ |++.+++|..+.++.
T Consensus 73 ~n~g~~~a~~~~~~~~l~LN~D~~~~~~~ 101 (305)
T COG1216 73 FNRGIKYALAKGDDYVLLLNPDTVVEPDL 101 (305)
T ss_pred hhHHHHHHhcCCCcEEEEEcCCeeeChhH
Confidence 45666666554 999999998877753
No 57
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan. Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.
Probab=86.30 E-value=0.21 Score=47.95 Aligned_cols=56 Identities=13% Similarity=-0.065 Sum_probs=33.6
Q ss_pred eeecccchhhhhhhcccchhhccccCCCC-cC---CccchhHHHHHHHHHHHHhCCeEEeecCee
Q 017862 208 LFPMCGMNLGFNRELIGPAMYFGLMGDGQ-PI---GRYDDMWAGWCSKVICDHLGLGVKTGLPYI 268 (365)
Q Consensus 208 ~~P~nsqNtaF~rea~gpa~~~~~m~~~~-~~---~R~~DIWrgy~~Qri~~~lG~~V~fg~P~v 268 (365)
..++++-|.+++|++| =..-.++..+|. .. .=.+|..-|+-++ ..|+.+++.+-.+
T Consensus 168 ~~~~~G~~~~~Rr~al-~~~~~~~~i~g~g~~~~~~l~eD~~l~~~~~----~~G~ri~~~~~~~ 227 (254)
T cd04191 168 EGNYWGHNAIIRVAAF-MEHCALPVLPGRPPFGGHILSHDFVEAALMR----RAGWEVRLAPDLE 227 (254)
T ss_pred ccCccceEEEEEHHHH-HHhcCCccccCCCCCCCCeecHHHHHHHHHH----HcCCEEEEccCCc
Confidence 4578899999999987 221111111111 11 2346888777655 4799999865444
No 58
>KOG1476 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 [Posttranslational modification, protein turnover, chaperones]
Probab=83.33 E-value=1.5 Score=43.95 Aligned_cols=35 Identities=26% Similarity=0.352 Sum_probs=27.9
Q ss_pred CCCeEEEEcCcCCh---hHHHHhhh---ccCCeEEEEEecC
Q 017862 16 KDELDIVIPTIRNL---DFLEQWRP---FFQAYHLIIVQDG 50 (365)
Q Consensus 16 ~~~i~IVItTI~~p---~~l~~~r~---~~~~~~lVVV~D~ 50 (365)
..-|-||.|||+++ ..|.++.. +.+++|.|||-|.
T Consensus 86 ~~~iivVTPTY~R~~q~~~LtRlanTL~~V~nLhWIVVEd~ 126 (330)
T KOG1476|consen 86 LPTIIVVTPTYVRPVQAAELTRLANTLRLVPNLHWIVVEDG 126 (330)
T ss_pred CccEEEEcccccchhHHHHHHHHHHHHhhcCCeeEEEEecC
Confidence 55688899999998 46666643 4789999999998
No 59
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=81.91 E-value=0.82 Score=43.72 Aligned_cols=32 Identities=25% Similarity=0.379 Sum_probs=26.0
Q ss_pred eEEEEcCcCCh---hHHHHhhh---ccCCeEEEEEecC
Q 017862 19 LDIVIPTIRNL---DFLEQWRP---FFQAYHLIIVQDG 50 (365)
Q Consensus 19 i~IVItTI~~p---~~l~~~r~---~~~~~~lVVV~D~ 50 (365)
|-||.|||.++ ..|.++.. +.++++-|||-|+
T Consensus 3 i~vVTPTy~R~~Q~~~LtRLa~TL~lVp~l~WIVVEd~ 40 (223)
T cd00218 3 IYVVTPTYARPVQKAELTRLAHTLRLVPPLHWIVVEDS 40 (223)
T ss_pred EEEECCCCccchhhHHHHHHHHHHhcCCceEEEEEeCC
Confidence 45788999988 57777744 3689999999998
No 60
>PRK05454 glucosyltransferase MdoH; Provisional
Probab=81.52 E-value=1.2 Score=48.93 Aligned_cols=94 Identities=14% Similarity=0.127 Sum_probs=53.5
Q ss_pred CCCCCeEEEEcCcCCh-h----HHHHhhh----c--cCCeEEEEEecCCCCCCccCCCCccccc--cchhhhh-----hh
Q 017862 14 LLKDELDIVIPTIRNL-D----FLEQWRP----F--FQAYHLIIVQDGDPSKTIKVPEGFDYEL--YNRNDIN-----RI 75 (365)
Q Consensus 14 ~~~~~i~IVItTI~~p-~----~l~~~r~----~--~~~~~lVVV~D~~~~~~~ktP~g~~~~~--~~~~~qe-----~~ 75 (365)
...-.+.||||++++. + .|++..+ + .++++++|+.|+ .+|+.+..+. +..-.++ ++
T Consensus 121 ~~~~~VaVliP~yNEd~~~v~~~L~a~~~Sl~~~~~~~~~e~~vLdD~------~d~~~~~~e~~~~~~L~~~~~~~~~i 194 (691)
T PRK05454 121 PPEARTAILMPIYNEDPARVFAGLRAMYESLAATGHGAHFDFFILSDT------RDPDIAAAEEAAWLELRAELGGEGRI 194 (691)
T ss_pred CCCCceEEEEeCCCCChHHHHHHHHHHHHHHHhcCCCCCEEEEEEECC------CChhHHHHHHHHHHHHHHhcCCCCcE
Confidence 3445699999999966 2 3443322 1 357999999999 7777654221 1110000 11
Q ss_pred hcCCcccCCCCCccccceeeEEEe----eEEeeeecCCCcccCC
Q 017862 76 LGPKASCISFKDSACRCFGYMVSK----KKYVYTIDDDCFVAKD 115 (365)
Q Consensus 76 l~~~~~~lP~~s~arrN~GYL~A~----a~~I~~~DDDn~P~~d 115 (365)
.. .+...-.+..+-|++..... .|||+..|-|..+.+|
T Consensus 195 ~y--r~R~~n~~~KaGNl~~~~~~~~~~~eyivvLDADs~m~~d 236 (691)
T PRK05454 195 FY--RRRRRNVGRKAGNIADFCRRWGGAYDYMVVLDADSLMSGD 236 (691)
T ss_pred EE--EECCcCCCccHHHHHHHHHhcCCCcCEEEEEcCCCCCCHH
Confidence 11 00001123344466644432 4999999999999985
No 61
>PRK14716 bacteriophage N4 adsorption protein B; Provisional
Probab=74.37 E-value=1.3 Score=46.97 Aligned_cols=90 Identities=11% Similarity=0.202 Sum_probs=51.0
Q ss_pred CCCeEEEEcCcCCh----hHHHHh-hhc-cCCeEEEEEecCCCCCCccCCCCcc-ccccchhhhhhhhcCCcccCCCCC-
Q 017862 16 KDELDIVIPTIRNL----DFLEQW-RPF-FQAYHLIIVQDGDPSKTIKVPEGFD-YELYNRNDINRILGPKASCISFKD- 87 (365)
Q Consensus 16 ~~~i~IVItTI~~p----~~l~~~-r~~-~~~~~lVVV~D~~~~~~~ktP~g~~-~~~~~~~~qe~~l~~~~~~lP~~s- 87 (365)
.-.++|+||.+++. ++|+.. .+. .++++++||.|. .++++.. .+.+.... ..-..-.+|-++
T Consensus 65 ~p~vaIlIPA~NE~~vI~~~l~s~L~~ldY~~~eIiVv~d~------ndd~T~~~v~~l~~~~----p~v~~vv~~~~gp 134 (504)
T PRK14716 65 EKRIAIFVPAWREADVIGRMLEHNLATLDYENYRIFVGTYP------NDPATLREVDRLAARY----PRVHLVIVPHDGP 134 (504)
T ss_pred CCceEEEEeccCchhHHHHHHHHHHHcCCCCCeEEEEEECC------CChhHHHHHHHHHHHC----CCeEEEEeCCCCC
Confidence 34599999999987 566653 222 478999999988 6666433 11111100 000000112221
Q ss_pred ---ccccceeeEEE------e---eEEeeeecCCCcccCC
Q 017862 88 ---SACRCFGYMVS------K---KKYVYTIDDDCFVAKD 115 (365)
Q Consensus 88 ---~arrN~GYL~A------~---a~~I~~~DDDn~P~~d 115 (365)
..+=|.|+-.+ . .++|+.+|-|+.++++
T Consensus 135 ~~Ka~aLN~~l~~~~~~e~~~G~~~d~vvi~DAD~~v~Pd 174 (504)
T PRK14716 135 TSKADCLNWIYQAIFAFERERGIRFAIIVLHDAEDVIHPL 174 (504)
T ss_pred CCHHHHHHHHHHHHHHhhhhcCCCcCEEEEEcCCCCcCcc
Confidence 22333344221 2 3999999999999996
No 62
>PF04583 Baculo_p74: Baculoviridae p74 conserved region; InterPro: IPR007663 Baculoviruses are distinct from other virus families in that there are two viral phenotypes: budded virus (BV) and occlusion-derived virus (ODV). BVs disseminate viral infection throughout the tissues of the host and ODVs transmit baculovirus between insect hosts. GFP tagging experiments implicate p74 as an ODV envelope protein [, ].; GO: 0019058 viral infectious cycle
Probab=65.02 E-value=3 Score=40.57 Aligned_cols=19 Identities=32% Similarity=0.551 Sum_probs=17.0
Q ss_pred cccCCCCCCCcccccccCC
Q 017862 143 LYDPYRDGADFVRGYPFSL 161 (365)
Q Consensus 143 ly~~f~~~~~wPRGyPl~~ 161 (365)
+++|||...+||||||=.+
T Consensus 123 ~WDPfGYnNMFPr~~ldDL 141 (249)
T PF04583_consen 123 FWDPFGYNNMFPREYLDDL 141 (249)
T ss_pred hcCcccccccCCCcchHHH
Confidence 4899999999999999665
No 63
>PLN02458 transferase, transferring glycosyl groups
Probab=62.69 E-value=3.9 Score=41.36 Aligned_cols=32 Identities=19% Similarity=0.247 Sum_probs=24.3
Q ss_pred eEEEEcCcC-Ch---hHHHHhhh---ccC-CeEEEEEecC
Q 017862 19 LDIVIPTIR-NL---DFLEQWRP---FFQ-AYHLIIVQDG 50 (365)
Q Consensus 19 i~IVItTI~-~p---~~l~~~r~---~~~-~~~lVVV~D~ 50 (365)
|-||.|||. ++ -.|.++.. +.+ +++.|||-|.
T Consensus 114 IivVTPTY~rR~~Q~a~LTRLahTL~lVp~pL~WIVVEd~ 153 (346)
T PLN02458 114 VIIVTPISTKDRYQGVLLRRLANTLRLVPPPLLWIVVEGQ 153 (346)
T ss_pred EEEECCCCCCcchhHHHHHHHHHHHhcCCCCceEEEEeCC
Confidence 677778896 67 57777754 355 8999999987
No 64
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]
Probab=59.33 E-value=10 Score=35.97 Aligned_cols=87 Identities=16% Similarity=0.249 Sum_probs=48.4
Q ss_pred CeEEEEcCcCCh---h-HHHHhhh----ccCCeEEEEEecCCCCCCccCCCCccccccchhhhhhhhcCC-cccCCCCCc
Q 017862 18 ELDIVIPTIRNL---D-FLEQWRP----FFQAYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPK-ASCISFKDS 88 (365)
Q Consensus 18 ~i~IVItTI~~p---~-~l~~~r~----~~~~~~lVVV~D~~~~~~~ktP~g~~~~~~~~~~qe~~l~~~-~~~lP~~s~ 88 (365)
+..|++|||++. . ++.-... .-..|++|+|.|. .|+|=.. ..++.|++.|.. .-++|-..-
T Consensus 4 kYsvilPtYnEk~Nlpi~~~li~~~~~e~~~~~eiIivDD~-------SpDGt~~---~a~~L~k~yg~d~i~l~pR~~k 73 (238)
T KOG2978|consen 4 KYSVILPTYNEKENLPIITRLIAKYMSEEGKKYEIIIVDDA-------SPDGTQE---VAKALQKIYGEDNILLKPRTKK 73 (238)
T ss_pred ceeEEeccccCCCCCeeeHHHHHhhhhhhcCceEEEEEeCC-------CCCccHH---HHHHHHHHhCCCcEEEEeccCc
Confidence 578999999965 2 2222222 2568999999995 6776220 112223333322 333333211
Q ss_pred ----cccceeeEEEeeEEeeeecCCCcccC
Q 017862 89 ----ACRCFGYMVSKKKYVYTIDDDCFVAK 114 (365)
Q Consensus 89 ----arrN~GYL~A~a~~I~~~DDDn~P~~ 114 (365)
++=--|.-.|..+||+-+|.|-.-++
T Consensus 74 lGLgtAy~hgl~~a~g~fiviMDaDlsHhP 103 (238)
T KOG2978|consen 74 LGLGTAYIHGLKHATGDFIVIMDADLSHHP 103 (238)
T ss_pred ccchHHHHhhhhhccCCeEEEEeCccCCCc
Confidence 11111334455799999999988666
No 65
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional
Probab=32.55 E-value=30 Score=35.68 Aligned_cols=94 Identities=19% Similarity=0.338 Sum_probs=56.5
Q ss_pred CCeEEEEcCcCCh-hHHHHh-hhccCCeEEEEEecCCCCCCccCCCCcccc-----ccch-hhhhhhh------------
Q 017862 17 DELDIVIPTIRNL-DFLEQW-RPFFQAYHLIIVQDGDPSKTIKVPEGFDYE-----LYNR-NDINRIL------------ 76 (365)
Q Consensus 17 ~~i~IVItTI~~p-~~l~~~-r~~~~~~~lVVV~D~~~~~~~ktP~g~~~~-----~~~~-~~qe~~l------------ 76 (365)
++..||||.-++. ..|+-- +..-.++-+|||.... ..-++.|..| .|.. .+++.+.
T Consensus 51 ~~mAIVVP~KdE~l~lleGVL~gIPh~c~iIvVSNS~----r~~~d~f~~E~dlv~~f~~~t~r~~i~vHQkDp~la~Af 126 (393)
T PRK14503 51 GRMAIVVPVKNERLKLLEGVLKGIPHECPIIVVSNSK----REPPDRFKLEVDLVRHFYRLTQRPIIIVHQKDPGLAEAL 126 (393)
T ss_pred hCcEEEEEcCCCchhHHhhHhhcCCCCCeEEEEeCCC----CCCchHHHHHHHHHHHHHhhhcCceEEEEcCCHHHHHHH
Confidence 4588999999865 666643 3345778888898771 1124445522 1222 2222111
Q ss_pred --cCCcccCCCCCccccc------eeeEEEe---eEEeeeecCCCcccC
Q 017862 77 --GPKASCISFKDSACRC------FGYMVSK---KKYVYTIDDDCFVAK 114 (365)
Q Consensus 77 --~~~~~~lP~~s~arrN------~GYL~A~---a~~I~~~DDDn~P~~ 114 (365)
.-+..++--++.-|.- +|-|.|+ ++||=|+|-||...+
T Consensus 127 ~~aGyp~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDADNyiPG 175 (393)
T PRK14503 127 KEAGYPYILDENGLVRSGKGEGMIIGLLLAKALGARYVGFVDADNYIPG 175 (393)
T ss_pred HHcCChhhhCCCCceecCcchHHHHHHHHHHHhCCCeEeEeecccCCCc
Confidence 1234555545544433 5677776 899999999999766
No 66
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase. This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together mannosyl-3-phosphoglycerate phosphatase (MPGP) comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus, this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.
Probab=30.49 E-value=34 Score=35.15 Aligned_cols=94 Identities=20% Similarity=0.312 Sum_probs=56.5
Q ss_pred CCeEEEEcCcCCh-hHHHHh-hhccCCeEEEEEecCCCCCCccCCCCcccc-----ccch-hhhhhhh------------
Q 017862 17 DELDIVIPTIRNL-DFLEQW-RPFFQAYHLIIVQDGDPSKTIKVPEGFDYE-----LYNR-NDINRIL------------ 76 (365)
Q Consensus 17 ~~i~IVItTI~~p-~~l~~~-r~~~~~~~lVVV~D~~~~~~~ktP~g~~~~-----~~~~-~~qe~~l------------ 76 (365)
++..||||.-++. ..|+-- +..-.++-+|||.... ..-++.|..+ .|.. .+++.+.
T Consensus 50 ~~maIVVP~KdE~l~lleGVL~gIPh~c~iIvVSNS~----r~~~d~f~~E~d~~~~f~~~t~r~~i~vHQkDp~la~Af 125 (381)
T TIGR02460 50 GKTAIVVPVKNEKLHLLEGVLSGIPHECPIIIVSNSK----REPPDRFKMEVDLIRHFSNLTHRKIIIIHQKDPALAEAF 125 (381)
T ss_pred hCcEEEEEcCCCchhHHhhHhhcCCCCCeEEEEeCCC----CCChhHHHHHHHHHHHHHHhhcCceEEEEcCCHHHHHHH
Confidence 4588999999866 666643 3345778888898871 1124445522 1222 2222111
Q ss_pred --cCCcccCCCCCccccc------eeeEEEe---eEEeeeecCCCcccC
Q 017862 77 --GPKASCISFKDSACRC------FGYMVSK---KKYVYTIDDDCFVAK 114 (365)
Q Consensus 77 --~~~~~~lP~~s~arrN------~GYL~A~---a~~I~~~DDDn~P~~ 114 (365)
.-+..++--++.-|.- +|-|.|+ ++||=|+|-||...+
T Consensus 126 ~~~gy~~il~~~g~VR~GKgEGMiiG~lLAk~~g~~YVGFiDaDNyiPG 174 (381)
T TIGR02460 126 KEVGYTSILGENGRVRSGKGEGMLLGLLLAKAIGAEYVGFVDADNYFPG 174 (381)
T ss_pred HHcCchhhhCCCCceecCcchHHHHHHHHHHHhCCceEeEeecccCCCc
Confidence 1234555444444432 5567776 899999999999766
No 67
>PF09039 HTH_Tnp_Mu_2: Mu DNA binding, I gamma subdomain; InterPro: IPR015126 This domain is responsible for binding the DNA attachment sites at each end of the Mu genome. They adopt a secondary structure comprising a four helix bundle tightly packed around a hydrophobic core consisting of aliphatic and aromatic amino acid residues. Helices 1 and 2 are oriented antiparallel to each other. Helix 3 crosses helices 1 and 2 at angles of 60 and 120 degrees, respectively. Excluding the C-terminal helix 4, the fold of the I-gamma subdomain is remarkably similar to that of the homeodomain family of helix-turn-helix DNA-binding proteins, although their amino acid sequences are completely unrelated []. ; PDB: 2EZL_A 2EZH_A 2EZI_A 2EZK_A.
Probab=29.16 E-value=54 Score=27.89 Aligned_cols=37 Identities=30% Similarity=0.393 Sum_probs=26.8
Q ss_pred hccccHHhhhhhCcCCCCCCCHHHHHHHHHHHHHHHH
Q 017862 288 YWQEELIPFFQSATLPKECTTVQKCYIELAKQVKAKL 324 (365)
Q Consensus 288 ~~~~~li~fl~~~~~~~~~~~~~~c~~eL~~~~~~~l 324 (365)
+.++++++||.+.=+-.+..++..||..|....++++
T Consensus 30 ~~~~eaw~~fksdYLr~e~Ps~~~cyrr~~~~a~~~G 66 (108)
T PF09039_consen 30 EIDEEAWEFFKSDYLRPEKPSFSACYRRLKRAAKENG 66 (108)
T ss_dssp -S-HHHHHHHHHHHTSTT---HHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHcCccCCCHHHHHHHHHHHHHHcC
Confidence 3467899999996554568899999999999988885
No 68
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis. Mannosylglycerate is a compatible solute that tends to be restricted to extreme thermophiles of archaea and bacteria. Note that in Rhodothermus marinus (Rhodothermus obamensis), this pathway is one of two; the other is condensation of GDP-mannose with D-glycerate by mannosylglycerate synthase.; GO: 0050504 mannosyl-3-phosphoglycerate synthase activity, 0051479 mannosylglycerate biosynthetic process, 0005737 cytoplasm; PDB: 2WVM_A 2WVL_A 2WVK_A 2ZU7_B 2ZU9_B 2ZU8_A.
Probab=24.86 E-value=37 Score=34.95 Aligned_cols=94 Identities=18% Similarity=0.317 Sum_probs=46.8
Q ss_pred CCeEEEEcCcCCh-hHHHHh-hhccCCeEEEEEecCCCCCCccCCCCccc--cc---c-chhhhhhhh------------
Q 017862 17 DELDIVIPTIRNL-DFLEQW-RPFFQAYHLIIVQDGDPSKTIKVPEGFDY--EL---Y-NRNDINRIL------------ 76 (365)
Q Consensus 17 ~~i~IVItTI~~p-~~l~~~-r~~~~~~~lVVV~D~~~~~~~ktP~g~~~--~~---~-~~~~qe~~l------------ 76 (365)
++..||||.-++. ..|+-- +..-.++-+|||..... .-+..|.. +. | +..+++.+.
T Consensus 50 ~~maIVVP~KnE~l~lleGVL~gIPh~C~IIvVSNS~r----~~~d~f~~E~d~l~~f~~~t~r~~~~vHQkDp~lA~Af 125 (381)
T PF09488_consen 50 SKMAIVVPCKNEKLKLLEGVLSGIPHDCLIIVVSNSSR----EPVDRFKMEVDLLKHFCRLTRRQIIIVHQKDPGLAEAF 125 (381)
T ss_dssp TTEEEEEEESS--HHHHHHHHHCS-TTSEEEEEE---C----SSSCHHHHHHHHHHHHHHHCT--EEEEETT-HHHHHHH
T ss_pred hCcEEEEECCCCchhhhhhhhhcCCCCCeEEEEECCCC----CCccHHHHHHHHHHHHHHhhcCceEEEecCCHHHHHHH
Confidence 4688999999965 666643 44457788888987611 11233442 21 2 222222110
Q ss_pred --cCCcccCCCCCccccc------eeeEEEe---eEEeeeecCCCcccC
Q 017862 77 --GPKASCISFKDSACRC------FGYMVSK---KKYVYTIDDDCFVAK 114 (365)
Q Consensus 77 --~~~~~~lP~~s~arrN------~GYL~A~---a~~I~~~DDDn~P~~ 114 (365)
.-+..++--++--|.- +|-|.|+ ++||=|+|-||...+
T Consensus 126 ~~aGy~~il~~~g~VR~GKgEGMiiGillAk~~g~~YVGFvDADNyiPG 174 (381)
T PF09488_consen 126 KEAGYPEILDEDGLVRNGKGEGMIIGILLAKAPGKRYVGFVDADNYIPG 174 (381)
T ss_dssp HHTT--TTB-TTSSB-SSHHHHHHHHHHHHHHTT-SEEEE--TTBS-HH
T ss_pred HHcCcHHHhCCCCceecCchHHHHHHHHHHHhcCCceEeEeeccCCCcc
Confidence 1235555555554432 5677777 899999999999766
No 69
>PF11341 DUF3143: Protein of unknown function (DUF3143); InterPro: IPR021489 This family of proteins has no known function.
Probab=24.52 E-value=15 Score=28.70 Aligned_cols=22 Identities=45% Similarity=0.819 Sum_probs=19.4
Q ss_pred CCcccccccCC-CCCcchheeee
Q 017862 151 ADFVRGYPFSL-REGVPTAVSHG 172 (365)
Q Consensus 151 ~~wPRGyPl~~-r~gv~~~iqqG 172 (365)
..=-|.|||+. |+-++.||.+|
T Consensus 41 ~~~~rsF~YsLSR~DvE~Ai~~G 63 (63)
T PF11341_consen 41 QDIQRSFPYSLSREDVEAAIFSG 63 (63)
T ss_pred cccEEeccCcCCHHHHHHHHhcC
Confidence 67789999999 88899988876
No 70
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=23.72 E-value=41 Score=37.38 Aligned_cols=94 Identities=16% Similarity=0.269 Sum_probs=56.0
Q ss_pred CCeEEEEcCcCCh-hHHHHh-hhccCCeEEEEEecCCCCCCccCCCCcccc-----ccch-hhhhhhh------------
Q 017862 17 DELDIVIPTIRNL-DFLEQW-RPFFQAYHLIIVQDGDPSKTIKVPEGFDYE-----LYNR-NDINRIL------------ 76 (365)
Q Consensus 17 ~~i~IVItTI~~p-~~l~~~-r~~~~~~~lVVV~D~~~~~~~ktP~g~~~~-----~~~~-~~qe~~l------------ 76 (365)
++..||||.-.+. ..|+-- +..-.++-+|||.... ...++-|..| .|.. .+++.+.
T Consensus 55 ~~~aivvp~k~e~~~~~~gvl~~ip~~c~ii~vsns~----r~~~d~~~~e~~~~~~~~~~~~~~~~~vhq~dp~~a~a~ 130 (694)
T PRK14502 55 KKMAIVLPIKDEDLKVFEGVLSGIPHDCLMIVISNSS----KQEVDNFKNEKDIVNRFCRITHRQAIVVHQKNPELANAI 130 (694)
T ss_pred hCcEEEEEcCCCchhHHhhHhhcCCCCCeEEEEeCCC----CCchHHHHHHHHHHHHHHHhhcCceEEEEcCCHHHHHHH
Confidence 4578999999866 666643 3345778888998871 1123445522 1222 2222111
Q ss_pred --cCCcccCCCCCccccc------eeeEEEe---eEEeeeecCCCcccC
Q 017862 77 --GPKASCISFKDSACRC------FGYMVSK---KKYVYTIDDDCFVAK 114 (365)
Q Consensus 77 --~~~~~~lP~~s~arrN------~GYL~A~---a~~I~~~DDDn~P~~ 114 (365)
.-+..++--++.-|.- +|-|.|+ ++||=|+|-||...+
T Consensus 131 ~~~g~~~~~~~~~~vr~gk~egm~~g~~la~~~g~~yvgfidadny~pg 179 (694)
T PRK14502 131 ADAGYPELLGEDGLIRSGKAEGMILGIILTMFSGRDYVGFIDTDNYIPG 179 (694)
T ss_pred HHcCChhhhCCCCceecCcchHHHHHHHHHHhcCCceEeEeeccCCCCc
Confidence 1234455444444432 5667776 899999999999766
No 71
>KOG2492 consensus CDK5 activator-binding protein [Signal transduction mechanisms]
Probab=23.23 E-value=59 Score=34.31 Aligned_cols=60 Identities=27% Similarity=0.389 Sum_probs=46.3
Q ss_pred CccchhHHHHHHH---------HHHHHhCCeEEeecCeeeecc--C-CCCccchHHhhhhhhccccHHhhhhh
Q 017862 239 GRYDDMWAGWCSK---------VICDHLGLGVKTGLPYIWHSK--A-SNPFVNLKKEYKGIYWQEELIPFFQS 299 (365)
Q Consensus 239 ~R~~DIWrgy~~Q---------ri~~~lG~~V~fg~P~v~~~r--~-h~~l~Dl~~E~~~~~~~~~li~fl~~ 299 (365)
+-..|...|||.- -++..+|..|.|+.+|..+.+ + |++++|-.+|++.=. ..+|+.||.+
T Consensus 395 glssdfitgfCgeTeedhq~t~sLlrqVgYdv~~lFaysmR~kT~ay~r~~ddvpeeVKnrr-l~~Li~~Fre 466 (552)
T KOG2492|consen 395 GLSSDFITGFCGETEEDHQYTVSLLRQVGYDVVFLFAYSMREKTRAYHRLKDDVPEEVKNRR-LFELITFFRE 466 (552)
T ss_pred cceeeeEecccCCChHHHHHHHHHHHHhccCeeeeEEeeecccchhhhhhcccccHHHHHHH-HHHHHHHHHH
Confidence 4456888888864 489999999999999999877 7 999999988887543 3345555544
No 72
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional
Probab=22.69 E-value=42 Score=37.41 Aligned_cols=34 Identities=18% Similarity=0.337 Sum_probs=25.1
Q ss_pred CCeEEEEcCcCCh----hHHHHhh-h-ccCCeEEEEEecC
Q 017862 17 DELDIVIPTIRNL----DFLEQWR-P-FFQAYHLIIVQDG 50 (365)
Q Consensus 17 ~~i~IVItTI~~p----~~l~~~r-~-~~~~~~lVVV~D~ 50 (365)
.-+.|+||.+|+. +.++.+. . ..++++++|+.|.
T Consensus 63 ~~vsIlVPa~nE~~vi~~~i~~ll~~ldYP~~eI~vi~~~ 102 (727)
T PRK11234 63 KPLAIMVPAWNETGVIGNMAELAATTLDYENYHIFVGTYP 102 (727)
T ss_pred CCEEEEEecCcchhhHHHHHHHHHHhCCCCCeEEEEEecC
Confidence 3499999999988 4455432 2 2578999999877
Done!