BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>017863
MDQETQKSNRNDDNLSQVNCVISENSRYSVNRVALDTVAAANSVEAVSIGGGIDDFGSKT
DDPGSSRALVEAQEVVINHDTCTSRVIGENSSNPVDGVSLETVAVRNSEQNTGFTEENGR
LGLKIDKMVSSGAVVNAPETCNGQGTDERRQTDPESSGNSSHVGDVVVPVIVINSNQTAC
SGGENRDLEVKSNDLGSGKALVENSIRKMSKPETEKESCVIDMKCSAGGGKGFRENPDGE
RVCRICHLGSEQLLETTATASTTVNLIQLGCGCKDELGVAHSDCAEAWFKLKGNRLCEIC
GQSAKNITGVGDYRFMEEWNERRFIASSSASERGGCWRGQPFCNFLMACLVIAFVLPWFF
RVNMF

High Scoring Gene Products

Symbol, full name Information P value
AT2G34200 protein from Arabidopsis thaliana 9.4e-27
AT5G05830 protein from Arabidopsis thaliana 3.3e-24
AT5G59000 protein from Arabidopsis thaliana 1.0e-23
AT5G01070 protein from Arabidopsis thaliana 7.0e-22
AT2G37950 protein from Arabidopsis thaliana 3.0e-21
AT5G60580 protein from Arabidopsis thaliana 4.3e-09
SHA1
shoot apical meristem arrest 1
protein from Arabidopsis thaliana 5.6e-07
AT5G08750 protein from Arabidopsis thaliana 1.6e-06
AT3G09760 protein from Arabidopsis thaliana 4.5e-06
AT5G18760 protein from Arabidopsis thaliana 5.5e-06
AT3G06330 protein from Arabidopsis thaliana 7.6e-06
AT2G45530 protein from Arabidopsis thaliana 9.4e-06

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  017863
        (365 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2040949 - symbol:AT2G34200 species:3702 "Arabi...   301  9.4e-27   1
TAIR|locus:2166399 - symbol:AT5G05830 species:3702 "Arabi...   277  3.3e-24   1
TAIR|locus:2154523 - symbol:AT5G59000 "AT5G59000" species...   240  1.0e-23   2
TAIR|locus:2150084 - symbol:AT5G01070 species:3702 "Arabi...   255  7.0e-22   1
TAIR|locus:2065620 - symbol:AT2G37950 species:3702 "Arabi...   249  3.0e-21   1
TAIR|locus:2175158 - symbol:AT5G60580 species:3702 "Arabi...   163  4.3e-09   1
TAIR|locus:2160619 - symbol:SHA1 "shoot apical meristem a...   142  5.6e-07   1
TAIR|locus:505006592 - symbol:AT5G08750 species:3702 "Ara...   138  1.6e-06   1
TAIR|locus:2075064 - symbol:AT3G09760 species:3702 "Arabi...   136  4.5e-06   1
TAIR|locus:2144890 - symbol:AT5G18760 "AT5G18760" species...   134  5.5e-06   1
TAIR|locus:2081076 - symbol:AT3G06330 species:3702 "Arabi...   133  7.6e-06   1
TAIR|locus:2043664 - symbol:AT2G45530 species:3702 "Arabi...   127  9.4e-06   1


>TAIR|locus:2040949 [details] [associations]
            symbol:AT2G34200 species:3702 "Arabidopsis thaliana"
            [GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0008270 "zinc ion
            binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IDA]
            InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292 SMART:SM00744
            EMBL:CP002685 GO:GO:0016020 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 EMBL:AY247802 IPI:IPI00516519 RefSeq:NP_180967.2
            UniGene:At.47757 ProteinModelPortal:Q84RF4 SMR:Q84RF4
            EnsemblPlants:AT2G34200.1 GeneID:817981 KEGG:ath:AT2G34200
            TAIR:At2g34200 InParanoid:Q84RF4 OMA:RICRICH PhylomeDB:Q84RF4
            ProtClustDB:CLSN2915127 Genevestigator:Q84RF4 Uniprot:Q84RF4
        Length = 222

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 61/124 (49%), Positives = 79/124 (63%)

Query:   239 GERVCRICHLGSEQLLETTAT-ASTTVNLIQLGCGCKDELGVAHSDCAEAWFKLKGNRLC 297
             GER+CRICH GS+Q  E +    S +  LI++GC CK+ELG+AH  CAEAWFKL+GN +C
Sbjct:    98 GERICRICHFGSDQSPEASGDDKSVSPELIEIGCKCKNELGLAHFHCAEAWFKLRGNSVC 157

Query:   298 EICGQSAKNITGVGDYRFMEEWNERRFIASSSASERGGCWRGQPFCNFLMACLVIAFVLP 357
             EICG +AKN+T     R ME+W+  R         RG   RGQ  C F++  L I  +L 
Sbjct:   158 EICGCTAKNVT----VRLMEDWSGERDNTLDGRRRRG---RGQSCCIFMVFLLTI-LLLH 209

Query:   358 WFFR 361
             WFF+
Sbjct:   210 WFFK 213


>TAIR|locus:2166399 [details] [associations]
            symbol:AT5G05830 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
            evidence=IEA;ISS] InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292
            SMART:SM00744 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB005237
            HOGENOM:HOG000238468 UniGene:At.66662 EMBL:BT006377 EMBL:AK227517
            IPI:IPI00516432 RefSeq:NP_196202.1 ProteinModelPortal:Q9FFJ5
            SMR:Q9FFJ5 PRIDE:Q9FFJ5 EnsemblPlants:AT5G05830.1 GeneID:830468
            KEGG:ath:AT5G05830 TAIR:At5g05830 eggNOG:NOG304565
            InParanoid:Q9FFJ5 OMA:KGNKICE PhylomeDB:Q9FFJ5
            ProtClustDB:CLSN2916385 Genevestigator:Q9FFJ5 Uniprot:Q9FFJ5
        Length = 204

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 69/200 (34%), Positives = 97/200 (48%)

Query:   173 INSNQTACSG-GENRDLEVKSNDLGSGKALVENSIRKMSKPETEKESCVIDMKCSAGGGK 231
             INS+ + C G GE R    +S    SG    E  I K  +  +    C +++    G  +
Sbjct:    17 INSS-SGCDGDGEPR----RS----SGAVEKEEEIVKDEERRSNASVCSVEIDLELGLPE 67

Query:   232 GFRENPDGERVCRICHLGSEQLLETTATASTTVNLIQLGCGCKDELGVAHSDCAEAWFKL 291
                     ER CRICH+  +      A   + V  I+LGC CK +L  AH  CAE WFK+
Sbjct:    68 KVVHLSQSERDCRICHMSLD-----AANLESGVP-IELGCSCKADLAAAHKHCAETWFKI 121

Query:   292 KGNRLCEICGQSAKNITGVGDYRFMEEWNERRFIASSSASERG-------GCWRGQPFCN 344
             KGN++CE+CG  A N+ G  +    E  NE   + + +    G         W+G  F N
Sbjct:   122 KGNKICEVCGSIAGNVVGSVEVESEESRNEANGVENLTLRTSGPRLVEGRSFWQGHRFLN 181

Query:   345 FLMACLVIAFVLPWFFRVNM 364
             FL+AC+V AFV+ W F  N+
Sbjct:   182 FLLACMVFAFVISWLFHFNV 201


>TAIR|locus:2154523 [details] [associations]
            symbol:AT5G59000 "AT5G59000" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA;ISS] InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292
            SMART:SM00744 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BT024612 IPI:IPI00541836
            RefSeq:NP_200708.1 UniGene:At.29249 ProteinModelPortal:Q2HIG9
            SMR:Q2HIG9 EnsemblPlants:AT5G59000.1 GeneID:836017
            KEGG:ath:AT5G59000 TAIR:At5g59000 eggNOG:NOG236315
            HOGENOM:HOG000238468 InParanoid:Q2HIG9 OMA:GRDCRIC PhylomeDB:Q2HIG9
            ProtClustDB:CLSN2914849 Genevestigator:Q2HIG9 Uniprot:Q2HIG9
        Length = 231

 Score = 240 (89.5 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
 Identities = 46/96 (47%), Positives = 56/96 (58%)

Query:   267 IQLGCGCKDELGVAHSDCAEAWFKLKGNRLCEICGQSAKNITGVGDYRFMEEWNERRFIA 326
             +QLGC CK +LGVAHS CAE WFK+KGN  CEICG  A N+ G             +  A
Sbjct:   130 LQLGCSCKGDLGVAHSKCAETWFKIKGNMTCEICGAMALNVAGEQSNPESTASTHSQAAA 189

Query:   327 SSSAS--ERGGCWRGQPFCNFLMACLVIAFVLPWFF 360
               S +  E  G W G+P  NFL+A +V AFV+ W F
Sbjct:   190 GQSLTQTEPRGIWHGRPVMNFLLAAMVFAFVVSWLF 225

 Score = 47 (21.6 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
 Identities = 9/18 (50%), Positives = 11/18 (61%)

Query:   234 RENPDGERVCRICHLGSE 251
             ++   G R CRICHL  E
Sbjct:    72 KKKKKGGRDCRICHLPLE 89


>TAIR|locus:2150084 [details] [associations]
            symbol:AT5G01070 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
            InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292 SMART:SM00744
            EMBL:CP002688 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
            IPI:IPI00938981 RefSeq:NP_001154689.1 UniGene:At.64221
            ProteinModelPortal:F4K7X6 SMR:F4K7X6 EnsemblPlants:AT5G01070.2
            GeneID:831898 KEGG:ath:AT5G01070 ArrayExpress:F4K7X6 Uniprot:F4K7X6
        Length = 206

 Score = 255 (94.8 bits), Expect = 7.0e-22, P = 7.0e-22
 Identities = 59/153 (38%), Positives = 81/153 (52%)

Query:   222 DMKCSAGGGKGFRENPDGERVCRICHLGSEQLLETTATASTTVNLIQLGCGCKDELGVAH 281
             D +  A G    R +P  E+ CRICHLG E      ++     + + LGC CKD+LG  H
Sbjct:    61 DTESVASGS--IRGSP--EKDCRICHLGLE------SSRHECGDPMVLGCSCKDDLGYVH 110

Query:   282 SDCAEAWFKLKGNRLCEICGQSAKNI----TGVGDYRF------MEEWNERRFIASSSAS 331
               CA+ WFK+KGN+ CEIC   A+N       +G          +E  N    +A+S + 
Sbjct:   111 KQCADTWFKIKGNKTCEICRSIAQNFFKVDNEIGQTTVETNVDDVEAGNTPTMVATSDSD 170

Query:   332 ERGGCWRGQPFCNFLMACLVIAFVLPWFFRVNM 364
             +R  C RG  F NFL+ C+V AFV+ WFF  N+
Sbjct:   171 DRRLC-RGNRFLNFLLTCMVCAFVISWFFHFNL 202


>TAIR|locus:2065620 [details] [associations]
            symbol:AT2G37950 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
            evidence=IEA;ISS] [GO:0009555 "pollen development" evidence=IMP]
            [GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
            InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292 SMART:SM00744
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009555 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 HOGENOM:HOG000238468
            EMBL:BT015932 EMBL:BT020500 IPI:IPI00547071 PIR:B84799
            RefSeq:NP_181331.1 UniGene:At.43950 ProteinModelPortal:Q5XEN4
            SMR:Q5XEN4 EnsemblPlants:AT2G37950.1 GeneID:818372
            KEGG:ath:AT2G37950 TAIR:At2g37950 eggNOG:NOG248960 OMA:FISWIFH
            PhylomeDB:Q5XEN4 ProtClustDB:CLSN2912914 Genevestigator:Q5XEN4
            Uniprot:Q5XEN4
        Length = 207

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 54/133 (40%), Positives = 75/133 (56%)

Query:   240 ERVCRICHLGSEQLLETTATASTTVNLIQLGCGCKDELGVAHSDCAEAWFKLKGNRLCEI 299
             E+ CRICHLG    +ET+   +     I+LGC CKD+L VAH  CAE WFK+KG++ CEI
Sbjct:    81 EKDCRICHLG----VETSGGGA-----IELGCSCKDDLAVAHRQCAETWFKIKGDKTCEI 131

Query:   300 CGQSAKNITGVGDY--RFMEEWNERRFIASSSASERGGC------WRGQPFCNFLMACLV 351
             C   A+N+ G  +     MEE  E R    ++A E GG       W+ Q   N ++AC+V
Sbjct:   132 CQSVARNVGGANEMVGSTMEE-RELRNGEETAAGEGGGATVVENRWQPQRVVNLVLACMV 190

Query:   352 IAFVLPWFFRVNM 364
               F + W F  ++
Sbjct:   191 FGFFISWIFHFHV 203


>TAIR|locus:2175158 [details] [associations]
            symbol:AT5G60580 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
            evidence=IEA;ISS] InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292
            SMART:SM00744 EMBL:CP002688 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 IPI:IPI00541814 RefSeq:NP_001032112.1
            RefSeq:NP_851232.1 UniGene:At.24411 ProteinModelPortal:F4K0E2
            SMR:F4K0E2 EnsemblPlants:AT5G60580.2 EnsemblPlants:AT5G60580.4
            GeneID:836179 KEGG:ath:AT5G60580 OMA:SMTASTM PhylomeDB:F4K0E2
            Uniprot:F4K0E2
        Length = 494

 Score = 163 (62.4 bits), Expect = 4.3e-09, P = 4.3e-09
 Identities = 43/126 (34%), Positives = 58/126 (46%)

Query:   186 RDLEVKSNDLGSGKALVENSIRKMSKPETEKESCVIDMKCSAGG---GKGFREN-PDGER 241
             R   V  ND       +++  R +      KE  V      AG    G    E+ P+ E 
Sbjct:   196 RSRSVPLNDKELSLKGMDSFFRVIPSTPRVKEGDVFSNASEAGNTETGDADGEDIPEDEA 255

Query:   242 VCRICHLGSEQLLETTATASTTVNLIQLGCGCKDELGVAHSDCAEAWFKLKGNRLCEICG 301
             VCRIC      L+E      T    +++ C CK EL +AH DCA  WF +KGN+ CE+C 
Sbjct:   256 VCRIC------LVELCEGGET----LKMECSCKGELALAHKDCALKWFTIKGNKTCEVCK 305

Query:   302 QSAKNI 307
             Q  KN+
Sbjct:   306 QEVKNL 311


>TAIR|locus:2160619 [details] [associations]
            symbol:SHA1 "shoot apical meristem arrest 1" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0010492
            "maintenance of shoot apical meristem identity" evidence=IMP]
            [GO:0048507 "meristem development" evidence=IMP] [GO:0000023
            "maltose metabolic process" evidence=RCA] [GO:0000165 "MAPK
            cascade" evidence=RCA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
            membrane" evidence=RCA] [GO:0009617 "response to bacterium"
            evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
            acid mediated signaling pathway" evidence=RCA] [GO:0009867
            "jasmonic acid mediated signaling pathway" evidence=RCA]
            [GO:0010310 "regulation of hydrogen peroxide metabolic process"
            evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
            response" evidence=RCA] [GO:0019252 "starch biosynthetic process"
            evidence=RCA] [GO:0031348 "negative regulation of defense response"
            evidence=RCA] [GO:0035304 "regulation of protein dephosphorylation"
            evidence=RCA] [GO:0043085 "positive regulation of catalytic
            activity" evidence=RCA] InterPro:IPR011016 Pfam:PF12906
            PROSITE:PS51292 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010492
            UniGene:At.49213 UniGene:At.8706 EMBL:BT002521 EMBL:BT008456
            IPI:IPI00529986 RefSeq:NP_201183.2 ProteinModelPortal:Q8GUG6
            SMR:Q8GUG6 IntAct:Q8GUG6 EnsemblPlants:AT5G63780.1 GeneID:836498
            KEGG:ath:AT5G63780 TAIR:At5g63780 eggNOG:NOG331235
            HOGENOM:HOG000083721 InParanoid:Q8GUG6 OMA:FICTNDI PhylomeDB:Q8GUG6
            ProtClustDB:CLSN2689553 ArrayExpress:Q8GUG6 Genevestigator:Q8GUG6
            Uniprot:Q8GUG6
        Length = 367

 Score = 142 (55.0 bits), Expect = 5.6e-07, P = 5.6e-07
 Identities = 41/112 (36%), Positives = 59/112 (52%)

Query:   199 KALVENSIRKMSKP-ETEKESCVIDMKCSAGGGKGFRE--NPDGERVCRICHLGSEQLLE 255
             K+ V+ +   +SK  E+E ++ V+    S G   GF E  +PD E    IC    E  ++
Sbjct:    74 KSNVDGTADDVSKATESELKNSVVK---SNGRESGFIELTSPDAEVF--ICTNDIEMGIQ 128

Query:   256 TTATASTTVNLIQLGCGCKDELGVAHSDCAEAWFKLKGNRLCEICGQSAKNI 307
                 A     L++LGC CK+EL + H  CA  WF   G+ +CEICG  A+NI
Sbjct:   129 QHQDA-----LLELGCSCKNELALVHYACALKWFLNHGSTVCEICGHPAENI 175


>TAIR|locus:505006592 [details] [associations]
            symbol:AT5G08750 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
            evidence=IEA;ISS] InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292
            SMART:SM00744 EMBL:CP002688 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 IPI:IPI00846907 RefSeq:NP_001078548.1
            UniGene:At.26266 ProteinModelPortal:F4KCH0 SMR:F4KCH0
            EnsemblPlants:AT5G08750.3 GeneID:830776 KEGG:ath:AT5G08750
            OMA:AILFVFW Uniprot:F4KCH0
        Length = 370

 Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 33/92 (35%), Positives = 49/92 (53%)

Query:   221 IDMKCSAGGGKGFRE--NPDGERVCRICHLGSEQLLETTATASTTVNLIQLGCGCKDELG 278
             +D + S     GF E  +PDGE    +C   +   +E  A       L++LGC CK++L 
Sbjct:    88 VDQRSSVVKSSGFIELISPDGEVF--VC---ANDDIEMGAWQHRD-KLLELGCSCKNDLA 141

Query:   279 VAHSDCAEAWFKLKGNRLCEICGQSAKNITGV 310
             + H  CA  WF   G+ +CEICG++ +NI  V
Sbjct:   142 LVHYACALKWFVNHGSTVCEICGKTTENIRTV 173


>TAIR|locus:2075064 [details] [associations]
            symbol:AT3G09760 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
            evidence=IEA;ISS] [GO:0006635 "fatty acid beta-oxidation"
            evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
            evidence=RCA] InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292
            SMART:SM00744 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 UniGene:At.66500
            HOGENOM:HOG000240594 eggNOG:KOG1609 EMBL:AY054231 EMBL:AY113176
            EMBL:DQ059112 IPI:IPI00520510 RefSeq:NP_566355.1 UniGene:At.26390
            ProteinModelPortal:Q940P1 SMR:Q940P1 PaxDb:Q940P1 PRIDE:Q940P1
            EnsemblPlants:AT3G09760.1 GeneID:820134 KEGG:ath:AT3G09760
            TAIR:At3g09760 InParanoid:Q940P1 OMA:AHSNPES PhylomeDB:Q940P1
            ProtClustDB:CLSN2688220 Genevestigator:Q940P1 Uniprot:Q940P1
        Length = 491

 Score = 136 (52.9 bits), Expect = 4.5e-06, P = 4.5e-06
 Identities = 27/76 (35%), Positives = 41/76 (53%)

Query:   232 GFRENPDGERVCRICHLGSEQLLETTATASTTVNLIQLGCGCKDELGVAHSDCAEAWFKL 291
             G  + P+ E VCRIC      L+E    +       ++ C C+ EL +AH +C   WF +
Sbjct:   255 GAEDVPEEEAVCRIC------LVELGEDSEA----FKMECLCRGELALAHKECTIKWFTI 304

Query:   292 KGNRLCEICGQSAKNI 307
             KGNR C++C Q  +N+
Sbjct:   305 KGNRTCDVCKQEVQNL 320


>TAIR|locus:2144890 [details] [associations]
            symbol:AT5G18760 "AT5G18760" species:3702 "Arabidopsis
            thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
            "zinc ion binding" evidence=IEA;ISS] [GO:0009507 "chloroplast"
            evidence=ISM] InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292
            SMART:SM00744 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BT025559 IPI:IPI00518282
            RefSeq:NP_197377.2 UniGene:At.31385 ProteinModelPortal:Q1H5A5
            SMR:Q1H5A5 PRIDE:Q1H5A5 EnsemblPlants:AT5G18760.1 GeneID:831994
            KEGG:ath:AT5G18760 TAIR:At5g18760 eggNOG:NOG269391
            HOGENOM:HOG000240594 InParanoid:Q1H5A5 OMA:NEANGDQ PhylomeDB:Q1H5A5
            ProtClustDB:CLSN2918192 Genevestigator:Q1H5A5 Uniprot:Q1H5A5
        Length = 411

 Score = 134 (52.2 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 36/121 (29%), Positives = 55/121 (45%)

Query:   235 ENPDGERVCRICHLGSEQLLETTATASTTVNLIQLGCGCKDELGVAHSDCAEAWFKLKGN 294
             E P+ E VCRIC       L+     +T    +++ C CK +L + H  CA  WF  KG 
Sbjct:   195 EIPEEEAVCRIC-------LDVCEEGNT----LKMECSCKGDLRLVHEHCAIKWFSTKGT 243

Query:   295 RLCEICGQSAKNITGVG-DYRFMEEWNERRFIASSSASERGGCWRGQPFCNFLMACLVIA 353
             R+C++C Q  +N+  +      + +   RR +   S SE      GQ F   ++   V  
Sbjct:   244 RICDVCRQEVRNLPVILLRVPTINQLTNRRELTQQS-SEPQSISVGQEFVVLVLISTVCY 302

Query:   354 F 354
             F
Sbjct:   303 F 303


>TAIR|locus:2081076 [details] [associations]
            symbol:AT3G06330 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005794 "Golgi apparatus"
            evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
            InterPro:IPR011016 Pfam:PF12906 PROSITE:PS51292 SMART:SM00744
            EMBL:CP002686 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
            EMBL:AC011623 GO:GO:0004842 HOGENOM:HOG000240594 EMBL:AF428443
            EMBL:AY133573 EMBL:DQ086840 IPI:IPI00545142 RefSeq:NP_566281.1
            UniGene:At.20572 UniGene:At.74200 ProteinModelPortal:Q9SQT6
            SMR:Q9SQT6 IntAct:Q9SQT6 PRIDE:Q9SQT6 EnsemblPlants:AT3G06330.1
            GeneID:819807 KEGG:ath:AT3G06330 TAIR:At3g06330 InParanoid:Q9SQT6
            OMA:HEACAMK PhylomeDB:Q9SQT6 ProtClustDB:CLSN2688112
            Genevestigator:Q9SQT6 Uniprot:Q9SQT6
        Length = 426

 Score = 133 (51.9 bits), Expect = 7.6e-06, P = 7.6e-06
 Identities = 35/123 (28%), Positives = 53/123 (43%)

Query:   185 NRDLEVKSNDLGSGKALVENSIRKMSKPETEKESCVIDMKCSAGGGKGFRENPDGERVCR 244
             N+D     +  G  K +V +      K     E+   D   S    +   E P+ E VCR
Sbjct:   161 NKDYSRSLSMPGRNKVIVRSISFDNHKARVSSETSA-DQVSSVPPEETDEEIPEEEAVCR 219

Query:   245 ICHLGSEQLLETTATASTTVNLIQLGCGCKDELGVAHSDCAEAWFKLKGNRLCEICGQSA 304
             IC       L+     +T    +++ C CK +L + H  CA  WF  KG R C++C Q  
Sbjct:   220 IC-------LDVCEEGNT----LKMECSCKGDLRLVHEACAMKWFSTKGTRTCDVCRQVV 268

Query:   305 KNI 307
             +N+
Sbjct:   269 QNL 271


>TAIR|locus:2043664 [details] [associations]
            symbol:AT2G45530 species:3702 "Arabidopsis thaliana"
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
            binding" evidence=IEA;ISS] InterPro:IPR011016 Pfam:PF12906
            PROSITE:PS51292 SMART:SM00744 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 EMBL:AC003680 EMBL:BT002381 EMBL:BT006278
            IPI:IPI00518588 PIR:T00866 RefSeq:NP_566045.1 UniGene:At.48594
            UniGene:At.70362 UniGene:At.75370 ProteinModelPortal:O64633
            SMR:O64633 EnsemblPlants:AT2G45530.1 GeneID:819161
            KEGG:ath:AT2G45530 TAIR:At2g45530 eggNOG:NOG244699
            HOGENOM:HOG000029131 InParanoid:O64633 OMA:SSHEQCR PhylomeDB:O64633
            ProtClustDB:CLSN2688943 ArrayExpress:O64633 Genevestigator:O64633
            Uniprot:O64633
        Length = 240

 Score = 127 (49.8 bits), Expect = 9.4e-06, P = 9.4e-06
 Identities = 22/43 (51%), Positives = 28/43 (65%)

Query:   266 LIQLGCGCKDELGVAHSDCAEAWFKLKGNRLCEICGQSAKNIT 308
             LI+LGC C+  L  AH  C +AWF+ KG+  CEIC   A N+T
Sbjct:    85 LIELGCQCRGGLAKAHRSCIDAWFRTKGSNQCEICQVVAVNVT 127


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.130   0.384    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      365       355   0.00080  117 3  11 23  0.45    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  12
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  243 KB (2131 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  30.84u 0.10s 30.94t   Elapsed:  00:00:01
  Total cpu time:  30.84u 0.10s 30.94t   Elapsed:  00:00:01
  Start:  Fri May 10 02:25:58 2013   End:  Fri May 10 02:25:59 2013

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