BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017864
(365 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P29976|AROF_ARATH Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2
Length = 525
Score = 575 bits (1482), Expect = e-163, Method: Compositional matrix adjust.
Identities = 273/362 (75%), Positives = 312/362 (86%), Gaps = 2/362 (0%)
Query: 1 MALSNASSTLSSKSLYANTHTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPAKNS 60
MALSNASS LS++S+Y + Q +F+ HPA TKP+S V +TAVHAA+PA+N+
Sbjct: 1 MALSNASS-LSTRSIYGGDLSHRPSNRQSSFTFHPAVNTKPKS-VNLVTAVHAAEPARNA 58
Query: 61 AAVKESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARS 120
+VKES +S + + KW E WK KKALQLP+YP+ +LE+VLKT+E FPP+VFAGEAR+
Sbjct: 59 VSVKESVASSSSGALKWTPESWKLKKALQLPDYPNANELESVLKTIEAFPPIVFAGEARN 118
Query: 121 LEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGR 180
LEERLA+AA+G AFLLQGGDCAESFKEFNA NIRDTFRVLLQM +VL FGGQ+P+IKVGR
Sbjct: 119 LEERLADAAVGKAFLLQGGDCAESFKEFNATNIRDTFRVLLQMSIVLTFGGQVPVIKVGR 178
Query: 181 MAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLL 240
MAGQFAKPRSD FE K+GVKLPSYKGDNINGD FDEKSR+PDP R+IRAY QSAATLNLL
Sbjct: 179 MAGQFAKPRSDAFEEKDGVKLPSYKGDNINGDTFDEKSRIPDPNRMIRAYTQSAATLNLL 238
Query: 241 RSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTST 300
R+FATGGYAA+QRVTQWNLDF E SEQ DRYQELA+RVDEALGFM+A GL DHP MT+T
Sbjct: 239 RAFATGGYAAIQRVTQWNLDFVEQSEQADRYQELANRVDEALGFMSACGLGTDHPLMTTT 298
Query: 301 EFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLG 360
+F+TSHECLLLPYEQ+LTR DSTSG YYDCSAHM+W GERTRQLDGAHVEFLRGIANPLG
Sbjct: 299 DFYTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMVWCGERTRQLDGAHVEFLRGIANPLG 358
Query: 361 IK 362
IK
Sbjct: 359 IK 360
>sp|P37215|AROF_SOLLC Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Solanum lycopersicum PE=2 SV=1
Length = 511
Score = 565 bits (1456), Expect = e-160, Method: Compositional matrix adjust.
Identities = 272/343 (79%), Positives = 298/343 (86%), Gaps = 14/343 (4%)
Query: 20 HTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPAKNSAAVKESSSSPAKASGKWAL 79
H L + QP FSL P R PI+AVHAA+P+K AVK+ GKW+L
Sbjct: 19 HLLHNPTPQPRFSLFPTTQHGRR---HPISAVHAAEPSKT--AVKQ---------GKWSL 64
Query: 80 EGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGG 139
+ WKTKKALQLPEYPD+ +LE+VLKTLE PPLVFAGEARSLEE+L EAA+G AFLLQGG
Sbjct: 65 DSWKTKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGG 124
Query: 140 DCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGV 199
DCAESFKEFNANNIRDTFR+LLQM VVLMFGGQ+P+IKVGRMAGQFAKPRSDPFE NGV
Sbjct: 125 DCAESFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPFEEINGV 184
Query: 200 KLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNL 259
KLPSYKGDNINGD FDEKSR+PDP RLIRAY QSAATLNLLR+FATGGYAAMQRVT+WNL
Sbjct: 185 KLPSYKGDNINGDTFDEKSRIPDPHRLIRAYMQSAATLNLLRAFATGGYAAMQRVTEWNL 244
Query: 260 DFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTR 319
DF E+SEQGDRYQELAHRVDEALGFMAAAGLT+DHP M++T+FWTSHECLLLPYEQALTR
Sbjct: 245 DFVENSEQGDRYQELAHRVDEALGFMAAAGLTVDHPIMSTTDFWTSHECLLLPYEQALTR 304
Query: 320 RDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIK 362
DSTSG +YDCSAHM+WVGERTRQLDGAHVEFLRG+ANPLGIK
Sbjct: 305 EDSTSGLFYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIK 347
>sp|P27608|AROF_TOBAC Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1
Length = 542
Score = 564 bits (1454), Expect = e-160, Method: Compositional matrix adjust.
Identities = 260/338 (76%), Positives = 293/338 (86%), Gaps = 12/338 (3%)
Query: 37 NTTKPRSLVQPITAVHAAQPAKNSAAVKESSSSPA------------KASGKWALEGWKT 84
N+TKP VQPI+A+H++ +KN + SS P+ +W +E WK+
Sbjct: 38 NSTKPVRFVQPISAIHSSDSSKNPIVSDKPSSKPSPPAATVTAAATTVTKTEWTVESWKS 97
Query: 85 KKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAES 144
KKALQLPEYP++ +L++VLKT+E+FPP+VFAGEARSLEERL EAAMG AFLLQGGDCAES
Sbjct: 98 KKALQLPEYPNQEELQSVLKTIEEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAES 157
Query: 145 FKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSY 204
FKEFNANNIRDTFR+LLQMG VLMFGGQMP+IKVGRMAGQFAKPRSD FE KNGVKLPSY
Sbjct: 158 FKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRSDNFEEKNGVKLPSY 217
Query: 205 KGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEH 264
+GDN+NGDAFD KSR PDP+RLIRAYCQSAATLNLLR+FATGGYAAMQR+ QWNLDF EH
Sbjct: 218 RGDNVNGDAFDAKSRTPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRINQWNLDFTEH 277
Query: 265 SEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTS 324
SEQGDRY+ELA+RVDEALGFMAAAGLT+DHP M +TEFWTSHECLLLPYEQ+LTR DSTS
Sbjct: 278 SEQGDRYRELANRVDEALGFMAAAGLTVDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTS 337
Query: 325 GQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIK 362
G YYDCSAH +WVGERTRQLDGAHVEFLRG+ANPLGIK
Sbjct: 338 GLYYDCSAHFIWVGERTRQLDGAHVEFLRGVANPLGIK 375
>sp|P37216|AROG_SOLLC Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic
OS=Solanum lycopersicum PE=2 SV=1
Length = 541
Score = 564 bits (1453), Expect = e-160, Method: Compositional matrix adjust.
Identities = 275/381 (72%), Positives = 307/381 (80%), Gaps = 26/381 (6%)
Query: 1 MALSNASST---LSSKSLYANTHTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPA 57
MALS ++T LS+KSL N L+S FS +TK VQPI AVH++
Sbjct: 1 MALSTNTTTNSLLSNKSLLQNQPLLSSPSKNAFFS---NKSTKTVRFVQPIAAVHSSDSN 57
Query: 58 KNSAAVKESSSSPAKASG----------------KWALEGWKTKKALQLPEYPDKAQLET 101
KN S P K+S +WA++ WK+KKALQLPEYPD+ +L +
Sbjct: 58 KNPIV----SDKPTKSSPPAATATTAPAPAVTKTEWAVDSWKSKKALQLPEYPDQEELRS 113
Query: 102 VLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLL 161
VLKT+++FPP+VFAGEARSLEERL EAAMG AFLLQGGDCAESFKEFNANNIRDTFR+LL
Sbjct: 114 VLKTIDEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILL 173
Query: 162 QMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVP 221
QMG VLMFGGQMP+IKVGRMAGQFAKPRSD FE K+GVKLPSY+GDN+NGDAFD KSR P
Sbjct: 174 QMGAVLMFGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTP 233
Query: 222 DPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEA 281
DP+RLIRAYCQSAATLNLLR+FATGGYAAMQR+ QWNLDF EHSEQGDRY+ELA RVDEA
Sbjct: 234 DPQRLIRAYCQSAATLNLLRAFATGGYAAMQRINQWNLDFTEHSEQGDRYRELASRVDEA 293
Query: 282 LGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERT 341
LGFM AAGLT+DHP M +TEFWTSHECLLLPYEQ+LTRRDSTSG +YDCSAH LWVGERT
Sbjct: 294 LGFMTAAGLTMDHPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLHYDCSAHFLWVGERT 353
Query: 342 RQLDGAHVEFLRGIANPLGIK 362
RQLDGAHVEFLRGIANPLGIK
Sbjct: 354 RQLDGAHVEFLRGIANPLGIK 374
>sp|P21357|AROF_SOLTU Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Solanum tuberosum GN=SHKA PE=1 SV=2
Length = 538
Score = 562 bits (1449), Expect = e-159, Method: Compositional matrix adjust.
Identities = 274/381 (71%), Positives = 310/381 (81%), Gaps = 26/381 (6%)
Query: 1 MALSNASST---LSSKSLYANTHTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPA 57
MALS+ S+T L ++SL N L S FS N+TK VQPI+AVH++
Sbjct: 1 MALSSTSTTNSLLPNRSLVQNQPLLPSPLKNAFFS---NNSTKTVRFVQPISAVHSS--- 54
Query: 58 KNSAAVKESSSSPAKASG----------------KWALEGWKTKKALQLPEYPDKAQLET 101
+S + S P+K+S +WA++ WK+KKALQLPEYP++ +L +
Sbjct: 55 -DSNKIPIVSDKPSKSSPPAATATTAPAPAVTKTEWAVDSWKSKKALQLPEYPNQEELRS 113
Query: 102 VLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLL 161
VLKT+++FPP+VFAGEARSLEERL EAAMG AFLLQGGDCAESFKEFNANNIRDTFR+LL
Sbjct: 114 VLKTIDEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILL 173
Query: 162 QMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVP 221
QMG VLMFGGQMP+IKVGRMAGQFAKPRSD FE K+GVKLPSY+GDN+NGDAFD KSR P
Sbjct: 174 QMGAVLMFGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTP 233
Query: 222 DPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEA 281
DP+RLIRAYCQSAATLNLLR+FATGGYAAMQR+ QWNLDF EHSEQGDRY+ELA RVDEA
Sbjct: 234 DPQRLIRAYCQSAATLNLLRAFATGGYAAMQRINQWNLDFTEHSEQGDRYRELASRVDEA 293
Query: 282 LGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERT 341
LGFM AAGLT+DHP M +TEFWTSHECLLLPYEQ+LTRRDSTSG YYDCSAH LWVGERT
Sbjct: 294 LGFMTAAGLTMDHPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLYYDCSAHFLWVGERT 353
Query: 342 RQLDGAHVEFLRGIANPLGIK 362
RQLDGAHVEFLRGIANPLGIK
Sbjct: 354 RQLDGAHVEFLRGIANPLGIK 374
>sp|P37822|AROG_SOLTU Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic
OS=Solanum tuberosum GN=SHKB PE=2 SV=1
Length = 511
Score = 560 bits (1444), Expect = e-159, Method: Compositional matrix adjust.
Identities = 270/343 (78%), Positives = 296/343 (86%), Gaps = 14/343 (4%)
Query: 20 HTLASKPHQPNFSLHPANTTKPRSLVQPITAVHAAQPAKNSAAVKESSSSPAKASGKWAL 79
H L + QP FSL P R PI+AVHAA+P+K AVK+ GKW+L
Sbjct: 19 HLLHNPLPQPRFSLFPTTQHGRR---HPISAVHAAEPSKT--AVKQ---------GKWSL 64
Query: 80 EGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGG 139
+ WKTKKALQLPEYPD+ +LE+VLKTLE PPLVFAGEARSLEE+L EAA+G AFLLQGG
Sbjct: 65 DSWKTKKALQLPEYPDEKELESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGG 124
Query: 140 DCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGV 199
DCAESFKEFNANNIRDTFR+LLQM VVLMFGGQ+P+IKVGRMAGQFAKPRSDP E NGV
Sbjct: 125 DCAESFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPLEEINGV 184
Query: 200 KLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNL 259
KLPSYKGDNINGD FDEKSR+PDP RLIRAY QSAATLNLLR+FATGGYAAMQRVT+WNL
Sbjct: 185 KLPSYKGDNINGDTFDEKSRIPDPHRLIRAYMQSAATLNLLRAFATGGYAAMQRVTEWNL 244
Query: 260 DFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTR 319
DF E+ EQGDRYQELAHRVDEALGFMAAAGLT+DHP M++T+FWTSHECLLLPYEQALTR
Sbjct: 245 DFVENCEQGDRYQELAHRVDEALGFMAAAGLTVDHPIMSTTDFWTSHECLLLPYEQALTR 304
Query: 320 RDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIK 362
DSTSG +YDCSAHM+WVGERTRQLDGAHVEFLRG+ANPLGIK
Sbjct: 305 EDSTSGLFYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIK 347
>sp|Q00218|AROG_ARATH Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic
OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2
Length = 507
Score = 550 bits (1418), Expect = e-156, Method: Compositional matrix adjust.
Identities = 265/363 (73%), Positives = 298/363 (82%), Gaps = 27/363 (7%)
Query: 1 MALSNASSTLSSKSLYANTHTLASKPHQP-NFSLHPANTTKPRSLVQPITAVHAAQPAKN 59
M NASS L++KS H P +P +FS P+ AVH+ P K
Sbjct: 1 MVTLNASSPLTTKSFLPYRHA----PRRPISFS--------------PVFAVHSTDPKK- 41
Query: 60 SAAVKESSSSPAKASGKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEAR 119
S+ A AS KW+LE WK+KKALQLP+YPD+ +++VL+TL FPP+VFAGEAR
Sbjct: 42 -------STQSASASVKWSLESWKSKKALQLPDYPDQKDVDSVLQTLSSFPPIVFAGEAR 94
Query: 120 SLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVG 179
LE++L +AAMG AF+LQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQ+P+IKVG
Sbjct: 95 KLEDKLGQAAMGQAFMLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQLPVIKVG 154
Query: 180 RMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNL 239
RMAGQFAKPRSDPFE K+GVKLPSY+GDNINGDAFDEKSR+PDP R++RAY QS ATLNL
Sbjct: 155 RMAGQFAKPRSDPFEEKDGVKLPSYRGDNINGDAFDEKSRIPDPHRMVRAYTQSVATLNL 214
Query: 240 LRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTS 299
LR+FATGGYAAMQRV+QWNLDF +HSEQGDRY+ELA+RVDEALGFM AAGLT HP MT+
Sbjct: 215 LRAFATGGYAAMQRVSQWNLDFTQHSEQGDRYRELANRVDEALGFMGAAGLTSAHPIMTT 274
Query: 300 TEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPL 359
TEFWTSHECLLLPYEQALTR DSTSG YYDCSAHMLWVGERTRQLDGAHVEFLRGIANPL
Sbjct: 275 TEFWTSHECLLLPYEQALTREDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPL 334
Query: 360 GIK 362
GIK
Sbjct: 335 GIK 337
>sp|Q75LR2|AROF_ORYSJ Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2
Length = 554
Score = 541 bits (1395), Expect = e-153, Method: Compositional matrix adjust.
Identities = 256/343 (74%), Positives = 290/343 (84%), Gaps = 28/343 (8%)
Query: 48 ITAVHAAQPAKNS-----AAVKESSSSPAK-----------------------ASGKWAL 79
+ AVHAA+P+KN +A K SS S A A +WA+
Sbjct: 38 VRAVHAAEPSKNPPVGVPSAAKTSSPSVAAPEKAPVAAAPAPVAPAPAATKQVAPARWAV 97
Query: 80 EGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGG 139
+ W+TKKALQLPEYP+ A+LE VLKT+E FPP+VFAGEAR LEERLA+AAMG AFLLQGG
Sbjct: 98 DSWRTKKALQLPEYPNAAELEAVLKTIEAFPPIVFAGEARHLEERLADAAMGRAFLLQGG 157
Query: 140 DCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGV 199
DCAESFKEFN NNIRDTFRVLLQM VL FGGQMP+IKVGRMAGQFAKPRS+ FE ++GV
Sbjct: 158 DCAESFKEFNGNNIRDTFRVLLQMSAVLTFGGQMPVIKVGRMAGQFAKPRSEAFEERDGV 217
Query: 200 KLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNL 259
KLPSY+GDNINGDAF+EKSR+PDP+R++RAY QSAATLNLLR+FATGGYAAMQRVTQWNL
Sbjct: 218 KLPSYRGDNINGDAFNEKSRIPDPQRMVRAYAQSAATLNLLRAFATGGYAAMQRVTQWNL 277
Query: 260 DFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTR 319
DF +HSEQGDRY+ELAHRVDEALGFM+AAGLT+DHP MTST+FWTSHECLLLPYEQ+LTR
Sbjct: 278 DFTQHSEQGDRYRELAHRVDEALGFMSAAGLTVDHPLMTSTDFWTSHECLLLPYEQSLTR 337
Query: 320 RDSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIK 362
+DST+G +YDCSAHMLWVGERTRQLDGAHVEFLRG+ANPLGIK
Sbjct: 338 QDSTTGHFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIK 380
>sp|Q75W16|AROG_ORYSJ Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic
OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1
Length = 539
Score = 541 bits (1394), Expect = e-153, Method: Compositional matrix adjust.
Identities = 254/328 (77%), Positives = 290/328 (88%), Gaps = 13/328 (3%)
Query: 48 ITAVHAAQPAKNSAAVKESS--SSPAKAS---------GKWALEGWKTKKALQLPEYPDK 96
++AVHAA PAK++ V+ ++ SSP+ + GKW ++ WK KKALQLPEYP +
Sbjct: 38 VSAVHAADPAKSNGPVQAAAKASSPSTVAAPEKKPVGLGKWTVDSWKAKKALQLPEYPSQ 97
Query: 97 AQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDT 156
+L++VLKT+E FPP+VFAGEAR LEERLA+AAMG AF+LQGGDCAESFKEFNANNIRDT
Sbjct: 98 EELDSVLKTIETFPPVVFAGEARHLEERLADAAMGRAFVLQGGDCAESFKEFNANNIRDT 157
Query: 157 FRVLLQMGVVLMFGGQMPIIKV-GRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFD 215
FR+LLQMG VLMFGGQMP++KV GRMAGQFAKPRSD FE ++GVKLPSY+GDNINGD FD
Sbjct: 158 FRILLQMGAVLMFGGQMPVVKVVGRMAGQFAKPRSDSFEERDGVKLPSYRGDNINGDTFD 217
Query: 216 EKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDR-YQEL 274
EKSRVPDP+R+IRAY QS ATLNLLR+FATGGYAAMQRVTQWNLDF +HSEQGDR Y+EL
Sbjct: 218 EKSRVPDPQRMIRAYAQSVATLNLLRAFATGGYAAMQRVTQWNLDFMDHSEQGDRRYREL 277
Query: 275 AHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHM 334
AHRVDEALGFM AAGLT+DHP MT+T+FWTSHECLLLPYEQ+LTR DSTSG +YDCSAHM
Sbjct: 278 AHRVDEALGFMTAAGLTVDHPIMTTTDFWTSHECLLLPYEQSLTREDSTSGLFYDCSAHM 337
Query: 335 LWVGERTRQLDGAHVEFLRGIANPLGIK 362
LWVGERTRQLDGAHVEFLRG+ANPLGIK
Sbjct: 338 LWVGERTRQLDGAHVEFLRGVANPLGIK 365
>sp|A0MH68|AROF_CATRO Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic
OS=Catharanthus roseus GN=DHS1 PE=2 SV=2
Length = 493
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/376 (57%), Positives = 255/376 (67%), Gaps = 52/376 (13%)
Query: 1 MALSNASSTLSSKSLYANTHTLASKPHQPNFSLHPANTT---KPRSLVQPITA-VHAAQP 56
MA+SN +S L+SK L + KPHQP + +TT KPRS +PI+A VH QP
Sbjct: 1 MAMSN-TSALASKLLPS------CKPHQPTLTFFSPSTTCQKKPRS-SRPISAAVHVTQP 52
Query: 57 AKNSAAVKESSSSPAKAS---GKWALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLV 113
K + ++++ + S G W E WK+KKALQLPEYPD+ +L+ VLKT+E FPPLV
Sbjct: 53 PKTP--ISSATATKRRLSLLNGVW--ESWKSKKALQLPEYPDEGKLDGVLKTIEAFPPLV 108
Query: 114 FAGEARSLEERLAEAAMGNAFLLQGGDCAESFKE-------FNANNIRDTFRVLLQMGVV 166
FAGEARSLEE+LA+AAMGNAFLLQGGDCAESFKE + N D R
Sbjct: 109 FAGEARSLEEKLAQAAMGNAFLLQGGDCAESFKELMPLYSRYFQNTASDECR-------- 160
Query: 167 LMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERL 226
L FGGQ P+IKVGRMAGQFAKPR DPFE K+G+ L G + +A+ + ++ L
Sbjct: 161 LTFGGQCPVIKVGRMAGQFAKPRLDPFEEKDGLWLSGANGWPVAWEAYCKLQQLSPSRAL 220
Query: 227 IRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMA 286
+ C A + + +LDF EHSEQGDRYQELAHRVDEALGFM
Sbjct: 221 LLVVCCYAESHPM------------------DLDFVEHSEQGDRYQELAHRVDEALGFMD 262
Query: 287 AAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQLDG 346
A GLT+DHP M +TEFWTSHECLLLPYEQALTR DSTSG +YDCSAHMLWVGERTRQLDG
Sbjct: 263 ACGLTVDHPIMATTEFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMLWVGERTRQLDG 322
Query: 347 AHVEFLRGIANPLGIK 362
AHVEFLRG+ANPLGIK
Sbjct: 323 AHVEFLRGVANPLGIK 338
>sp|P80574|AROF_STRCO Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Streptomyces
coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=aroH
PE=1 SV=3
Length = 450
Score = 333 bits (855), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 156/283 (55%), Positives = 199/283 (70%), Gaps = 2/283 (0%)
Query: 82 WKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDC 141
W+ A Q PEYPD L V+ LE +PPLVFAGE L R+A A G AFLLQGGDC
Sbjct: 15 WRDLPAAQQPEYPDTEALRAVIADLESYPPLVFAGECDQLRARMAAVAKGEAFLLQGGDC 74
Query: 142 AESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKL 201
AE+F +A++IR+ + LLQMG VL + +P++KVGR+AGQ++KPRS P E ++GV L
Sbjct: 75 AEAFDAVSADHIRNKLKTLLQMGAVLTYAASVPVVKVGRIAGQYSKPRSKPTETRDGVTL 134
Query: 202 PSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDF 261
P+Y+GD++NG F E +R+PDPERL R Y SA+TLNL+R+F TGGYA +++V WN DF
Sbjct: 135 PTYRGDSVNGFDFTEAARIPDPERLKRMYHASASTLNLVRAFTTGGYADLRQVHAWNQDF 194
Query: 262 AEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRD 321
+ S G RY++LA +D AL FM A G D + EF++SHE LLL YE ALTR D
Sbjct: 195 VKSSPSGQRYEQLAREIDNALNFMRACG--TDPAEFQTVEFFSSHEALLLDYESALTRVD 252
Query: 322 STSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKNG 364
S +GQ YD S HM+W+GERTRQLD AH+EF I NP+GIK G
Sbjct: 253 SRTGQLYDVSGHMVWIGERTRQLDHAHIEFASRIRNPIGIKLG 295
>sp|P80576|AROF_NEUCR Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=aro-8 PE=1 SV=2
Length = 481
Score = 248 bits (634), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 136/302 (45%), Positives = 179/302 (59%), Gaps = 17/302 (5%)
Query: 77 WALEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLL 136
WA + W++K Q PEYPDKA LE L+ PP+V E L E L + A G AFLL
Sbjct: 12 WAPDSWRSKPIKQCPEYPDKAALEKATNELKTLPPIVLPNEIIRLREHLRDVAQGKAFLL 71
Query: 137 QGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVK 196
QGGDCAE F + I ++LLQM +VL++G P++++GRMAGQ+AKPRS P E
Sbjct: 72 QGGDCAELFSYCQQDVIESKIKLLLQMSLVLLWGADKPVVRIGRMAGQYAKPRSSPVETI 131
Query: 197 NGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQ 256
NG ++PS++GD +NG F R DP RL+RAY S+ATLN +R G A +
Sbjct: 132 NGKEVPSFRGDILNG--FHPDERELDPNRLVRAYQYSSATLNYIRGAIGSGIADLHGPLD 189
Query: 257 WNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQA 316
W L +YQE R+ E L FM G + +++ E +TSHE LLL YE+
Sbjct: 190 WGLGHVRDPALKSKYQETVDRIQEMLRFMHTIGADQNE-KLSTVELFTSHEGLLLEYEEP 248
Query: 317 LTRR-----------DSTS---GQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIK 362
LTR DST+ +YY+ SAH LW+G+RTRQ+D AHVE+ RGIANP+G+K
Sbjct: 249 LTRLLNHPSVRSYPPDSTTPPKKEYYNTSAHFLWIGDRTRQIDHAHVEYFRGIANPIGVK 308
Query: 363 NG 364
G
Sbjct: 309 IG 310
>sp|O53512|AROG_MYCTU Phospho-2-dehydro-3-deoxyheptonate aldolase AroG OS=Mycobacterium
tuberculosis GN=aroG PE=1 SV=1
Length = 462
Score = 246 bits (628), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 129/289 (44%), Positives = 177/289 (61%), Gaps = 9/289 (3%)
Query: 79 LEGWKTKKALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQG 138
L+ K A Q P +P L + LE PP+ E L+E+LA+ A G AFLLQG
Sbjct: 26 LDAALAKPAAQQPTWPADQAL-AMRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQG 84
Query: 139 GDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNG 198
GDCAE+F + +IR R LLQM VVL +G MP++KV R+AGQ+AKPRS +
Sbjct: 85 GDCAETFMDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARIAGQYAKPRSADI---DA 141
Query: 199 VKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWN 258
+ L SY+GD ING A D +R DP RL+RAY ++A +NL+R+ + G A++ V WN
Sbjct: 142 LGLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLVRALTSSGLASLHLVHDWN 201
Query: 259 LDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALT 318
+F S G RY+ LA +D L FM+A G+ + + + E + SHE L+L YE+A+
Sbjct: 202 REFVRTSPAGARYEALATEIDRGLRFMSACGVADRN--LQTAEIYASHEALVLDYERAML 259
Query: 319 RR---DSTSGQYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKNG 364
R D Q +D SAH +W+GERTRQ+DGAH+ F + IANP+G+K G
Sbjct: 260 RLSDGDDGEPQLFDLSAHTVWIGERTRQIDGAHIAFAQVIANPVGVKLG 308
>sp|A0R033|AROG_MYCS2 Phospho-2-dehydro-3-deoxyheptonate aldolase AroG OS=Mycobacterium
smegmatis (strain ATCC 700084 / mc(2)155) GN=aroG PE=3
SV=1
Length = 464
Score = 246 bits (628), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 135/293 (46%), Positives = 182/293 (62%), Gaps = 15/293 (5%)
Query: 79 LEGWKTKKALQLPEY-PDKAQ-LETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLL 136
L+ K A+Q P + PD A+ + TVL E PP+ E L+ LA+ A G AFLL
Sbjct: 26 LDSALAKPAVQQPSWDPDAAKAMRTVL---ESVPPVTVPSEIEKLKGLLADVAQGKAFLL 82
Query: 137 QGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVK 196
QGGDCAE+F + +IR R LLQM VVL +G MP++KV R+AGQ+AKPRS
Sbjct: 83 QGGDCAETFVDNTEPHIRANIRTLLQMAVVLTYGASMPVVKVARIAGQYAKPRSSDV--- 139
Query: 197 NGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQ 256
+ + L SY+GD ING A D +R DP RL+RAY ++A +NL+R+ + G A++ V +
Sbjct: 140 DALGLKSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLMRALTSSGLASLHLVHE 199
Query: 257 WNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQA 316
WN +F S G RY+ LA +D L FM+A G+ + + + E + SHE L+L YE+A
Sbjct: 200 WNREFVRTSPAGARYEALAGEIDRGLNFMSACGVADRN--LQTAEIFASHEALVLDYERA 257
Query: 317 LTRRDS---TSG--QYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKNG 364
+ R + T G + YD SAH LW+GERTRQLDGAHV F IANP+G+K G
Sbjct: 258 MLRLSNPAETDGAAKLYDQSAHYLWIGERTRQLDGAHVAFAEVIANPIGVKLG 310
>sp|Q51789|PHZC_PSEFL Probable phospho-2-dehydro-3-deoxyheptonate aldolase OS=Pseudomonas
fluorescens GN=phzC PE=3 SV=1
Length = 400
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 129/279 (46%), Gaps = 47/279 (16%)
Query: 86 KALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESF 145
+ALQ P++ + +QL L D L+ + L LA A G A ++Q GDCAE
Sbjct: 12 EALQQPQWSEPSQLHDAQAYLRDSASLIRVEDILVLRATLARVAAGEAMIIQCGDCAEDM 71
Query: 146 KEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYK 205
E A+++ +L + Q P+++VGR+AGQFAKPRS+ E V+LP Y+
Sbjct: 72 DESAADHVTRKAALLDMLAGTFRLVTQQPVVRVGRIAGQFAKPRSNHSERIGDVELPVYR 131
Query: 206 GDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHS 265
GD +NG R D +RL+R GY A Q D +H
Sbjct: 132 GDMVNGRDAVLGHRQHDAQRLVR------------------GYRAAQ-------DIMQH- 165
Query: 266 EQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSG 325
LG+ +G +T + WTSHE L+L YE RRD G
Sbjct: 166 ----------------LGWKEPSG----QEQLTGSPAWTSHEMLVLDYELPQVRRDE-QG 204
Query: 326 QYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKNG 364
+ + S H W+GERTRQL GAHV L + NP+ K G
Sbjct: 205 RTFLGSTHWPWIGERTRQLTGAHVALLSEVLNPVACKVG 243
>sp|Q51517|PHZC_PSECL Probable phospho-2-dehydro-3-deoxyheptonate aldolase OS=Pseudomonas
chlororaphis GN=phzC PE=3 SV=1
Length = 400
Score = 135 bits (340), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/279 (32%), Positives = 128/279 (45%), Gaps = 47/279 (16%)
Query: 86 KALQLPEYPDKAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESF 145
+A Q P++ + +QL L D L+ + L LA A G A ++Q GDCAE
Sbjct: 12 EAFQQPQWSEPSQLHDAQAYLRDSASLIRVEDILVLRATLARVAAGEAMVIQSGDCAEDM 71
Query: 146 KEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYK 205
E +++ VL + Q P+++VGR+AGQFAKPRS+ E V+LP Y+
Sbjct: 72 DESTPDHVARKAAVLDILAGTFRLVTQQPVVRVGRIAGQFAKPRSNNNERIGDVELPVYR 131
Query: 206 GDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHS 265
GD +NG R D +RL+R Y SAA D +H
Sbjct: 132 GDMVNGREAVCGHRQHDAQRLVRGY--SAAR-----------------------DIMQH- 165
Query: 266 EQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSG 325
LG+ A+A ++ + WT+HE L+L YE R+D G
Sbjct: 166 ----------------LGWKASAS----QEQLSGSPAWTNHEMLVLDYELPQLRQDE-QG 204
Query: 326 QYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKNG 364
+ + S H W+GERTRQL GAHV L + NP+ K G
Sbjct: 205 RVFLGSTHWPWIGERTRQLTGAHVTLLSEVLNPVACKVG 243
>sp|A7IB61|HELS_METB6 Putative ski2-type helicase OS=Methanoregula boonei (strain 6A8)
GN=Mboo_2458 PE=3 SV=1
Length = 723
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 173 MPIIKVGRMAGQFAKPRSDPFE-----VKNGVKLPSYKGDNINGDAFDEKSRVPDPERLI 227
+P+ + +MAG+ +PR DP+ K ++P I +A D SR+ +P
Sbjct: 360 IPVSEYRQMAGRAGRPRLDPYGEAVLIAKEAEQVPELFEVYIEAEAEDVHSRIAEP---- 415
Query: 228 RAYCQSAATLNLLRSFATGGYAAMQRVTQW-NLDFAEHSEQGDRYQELAHR-VDEALGFM 285
+A ++L A+G +T++ N F H + R L HR +DEAL F+
Sbjct: 416 -----TALYTHVLSLVASGFAGTRGELTEFMNRSFYVHEHKQGR---LIHRAIDEALQFL 467
Query: 286 AAAGLTLD 293
A + ++
Sbjct: 468 ITAEMVVE 475
>sp|A4Z0U1|CH603_BRASO 60 kDa chaperonin 3 OS=Bradyrhizobium sp. (strain ORS278) GN=groL3
PE=3 SV=1
Length = 547
Score = 32.7 bits (73), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 52/178 (29%)
Query: 96 KAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRD 155
KAQ+E +T D+ + L+ERLA+ A G A + GG KE + + D
Sbjct: 350 KAQIE---ETTSDY-------DREKLQERLAKLAGGVAVIRVGGATEVEVKE-KKDRVED 398
Query: 156 TF---RVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKL----------- 201
R +Q G+V GG + +++ + G+ P SD V+ G+ +
Sbjct: 399 ALNATRAAVQEGIV--PGGGVALLRAKKAVGRITNPNSD---VQAGINIVLKALEAPMRQ 453
Query: 202 ----PSYKGDNINGDAFDEKSR------------------VPDPERLIRAYCQSAATL 237
+G + G +EKS + DP +++R Q A+++
Sbjct: 454 IAENAGVEGSIVVGKILEEKSETFGFDAQTEDYVDMVAKGIIDPAKVVRTALQDASSV 511
>sp|A5ECI7|CH601_BRASB 60 kDa chaperonin 1 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182) GN=groL1 PE=3 SV=1
Length = 547
Score = 32.3 bits (72), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 52/178 (29%)
Query: 96 KAQLETVLKTLEDFPPLVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRD 155
KAQ+E +T D+ + L+ERLA+ A G A + GG KE + + D
Sbjct: 350 KAQIE---ETTSDY-------DREKLQERLAKLAGGVAVIRVGGATEIEVKE-KKDRVED 398
Query: 156 TF---RVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKL----------- 201
R +Q G+V GG + +++ + G+ P SD V+ G+ +
Sbjct: 399 ALNATRAAVQEGIV--PGGGVALLRAKKAVGRITNPNSD---VQAGINIVLKALEAPVRQ 453
Query: 202 ----PSYKGDNINGDAFDEKSR------------------VPDPERLIRAYCQSAATL 237
+G + G +EKS + DP +++R Q A+++
Sbjct: 454 IAENAGVEGSLVVGKILEEKSETFGFDAQSEDYVDMVAKGIIDPAKVVRTALQDASSV 511
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,285,253
Number of Sequences: 539616
Number of extensions: 5655648
Number of successful extensions: 15262
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 15193
Number of HSP's gapped (non-prelim): 54
length of query: 365
length of database: 191,569,459
effective HSP length: 119
effective length of query: 246
effective length of database: 127,355,155
effective search space: 31329368130
effective search space used: 31329368130
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)