BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017866
(365 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 124/233 (53%), Gaps = 33/233 (14%)
Query: 143 FYSVYCKRGRREAMED------RF-----SALVD------FQGHSKQAVFGIFDGHGGAK 185
Y V GRR MED RF S+L+D F H FG++DGHGG++
Sbjct: 13 LYGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFNPHLSAHFFGVYDGHGGSQ 72
Query: 186 AAEFAAENLDKNILEEVLRRDIE--------DQIEDAVKRGYLNTDSEF-----LKEDVY 232
A + E + + EE+++ E ++ + A+ ++ DSE E V
Sbjct: 73 VANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSEIETVAHAPETV- 131
Query: 233 GGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDL 292
GS V A++ + V+N GD RAV+ RG AL+ DH+P R+DE +RIE GG V
Sbjct: 132 -GSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAARIEAAGGKVIR 190
Query: 293 CHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWD 345
+G RV G LA+SR++GDR+LK +I +PE +R E + LILASDGLWD
Sbjct: 191 WNGA-RVFGVLAMSRSIGDRYLKPSVIPDPEVTSVRRVKEDDCLILASDGLWD 242
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 124/228 (54%), Gaps = 30/228 (13%)
Query: 142 GFYSVYCKRGRREAMEDRFS-----------ALVD--FQGHSKQAVFGIFDGHGGAKAAE 188
GF S+ C GRR MED S +++D F S FG++DGHGG++ A
Sbjct: 12 GFTSI-C--GRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVAN 68
Query: 189 FAAENLDKNILEEVLRR-----DIEDQIED---AVKRGYLNTDSEF---LKEDVYGGSCC 237
+ E + + EE+ + D + +E A+ +L DSE E V GS
Sbjct: 69 YCRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESVAPETV--GSTS 126
Query: 238 VTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTW 297
V A++ + V+N GD RAV+ RG A L+ DH+P REDE +RIE GG V +G
Sbjct: 127 VVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGA- 185
Query: 298 RVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWD 345
RV G LA+SR++GDR+LK II +PE ++ E + LILASDG+WD
Sbjct: 186 RVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWD 233
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 124/228 (54%), Gaps = 30/228 (13%)
Query: 142 GFYSVYCKRGRREAMEDRFS-----------ALVD--FQGHSKQAVFGIFDGHGGAKAAE 188
GF S+ C GRR MED S +++D F S FG++DGHGG++ A
Sbjct: 15 GFTSI-C--GRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVAN 71
Query: 189 FAAENLDKNILEEVLRR-----DIEDQIED---AVKRGYLNTDSEF---LKEDVYGGSCC 237
+ E + + EE+ + D + +E A+ +L DSE E V GS
Sbjct: 72 YCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIESVAPETV--GSTS 129
Query: 238 VTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTW 297
V A++ + V+N GD RAV+ RG A L+ DH+P REDE +RIE GG V +G
Sbjct: 130 VVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGA- 188
Query: 298 RVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWD 345
RV G LA+SR++GDR+LK II +PE ++ E + LILASDG+WD
Sbjct: 189 RVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWD 236
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 124/228 (54%), Gaps = 30/228 (13%)
Query: 142 GFYSVYCKRGRREAMEDRFS-----------ALVD--FQGHSKQAVFGIFDGHGGAKAAE 188
GF S+ C GRR MED S +++D F S FG++DGHGG++ A
Sbjct: 27 GFTSI-C--GRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVAN 83
Query: 189 FAAENLDKNILEEVLRR-----DIEDQIED---AVKRGYLNTDSEF---LKEDVYGGSCC 237
+ E + + EE+ + D + +E A+ +L DSE E V GS
Sbjct: 84 YCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIESVAPETV--GSTS 141
Query: 238 VTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTW 297
V A++ + V+N GD RAV+ RG A L+ DH+P REDE +RIE GG V +G
Sbjct: 142 VVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGA- 200
Query: 298 RVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWD 345
RV G LA+SR++GDR+LK II +PE ++ E + LILASDG+WD
Sbjct: 201 RVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWD 248
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 123/244 (50%), Gaps = 51/244 (20%)
Query: 150 RGRREAMEDRFSA------------LVDFQG------HSKQAVFGIFDGHGGAKAAEFAA 191
+G R MED F+ + D +G H FG++DGHGG K A++
Sbjct: 35 QGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCR 94
Query: 192 ENLDKNILEEVLR-RD-------------------------IEDQIEDAVKRGYLNTDSE 225
+ L + EE+ R +D ++ +IE + R + + +
Sbjct: 95 DRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDK 154
Query: 226 FLK----EDVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKS 281
L+ E V GS V AL+ + +VVSN GD RAV+ RG A L+ DH+P REDE +
Sbjct: 155 VLEAVASETV--GSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYA 212
Query: 282 RIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASD 341
RIE GG V G RV G LA+SR++GDR+LK ++I EPE + E E LILASD
Sbjct: 213 RIENAGGKVIQWQGA-RVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASD 271
Query: 342 GLWD 345
GLWD
Sbjct: 272 GLWD 275
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 123/244 (50%), Gaps = 51/244 (20%)
Query: 150 RGRREAMEDRFSA------------LVDFQG------HSKQAVFGIFDGHGGAKAAEFAA 191
+G R MED F+ + D +G H FG++DGHGG K A++
Sbjct: 26 QGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCR 85
Query: 192 ENLDKNILEEVLR-RD-------------------------IEDQIEDAVKRGYLNTDSE 225
+ L + EE+ R +D ++ +IE + R + + +
Sbjct: 86 DRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDK 145
Query: 226 FLK----EDVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKS 281
L+ E V GS V AL+ + +VVSN GD RAV+ RG A L+ DH+P REDE +
Sbjct: 146 VLEAVASETV--GSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYA 203
Query: 282 RIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASD 341
RIE GG V G RV G LA+SR++GDR+LK ++I EPE + E E LILASD
Sbjct: 204 RIENAGGKVIQWQGA-RVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASD 262
Query: 342 GLWD 345
GLWD
Sbjct: 263 GLWD 266
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 123/244 (50%), Gaps = 51/244 (20%)
Query: 150 RGRREAMEDRFSA------------LVDFQG------HSKQAVFGIFDGHGGAKAAEFAA 191
+G R MED F+ + D +G H FG++DGHGG K A++
Sbjct: 11 QGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCR 70
Query: 192 ENLDKNILEEVLR-RD-------------------------IEDQIEDAVKRGYLNTDSE 225
+ L + EE+ R +D ++ +IE + R + + +
Sbjct: 71 DRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDK 130
Query: 226 FLK----EDVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKS 281
L+ E V GS V AL+ + +VVSN GD RAV+ RG A L+ DH+P REDE +
Sbjct: 131 VLEAVASETV--GSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYA 188
Query: 282 RIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASD 341
RIE GG V G RV G LA+SR++GDR+LK ++I EPE + E E LILASD
Sbjct: 189 RIENAGGKVIQWQGA-RVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASD 247
Query: 342 GLWD 345
GLWD
Sbjct: 248 GLWD 251
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 123/244 (50%), Gaps = 51/244 (20%)
Query: 150 RGRREAMEDRFSA------------LVDFQG------HSKQAVFGIFDGHGGAKAAEFAA 191
+G R MED F+ + D +G H FG++DGHGG K A++
Sbjct: 28 QGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCR 87
Query: 192 ENLDKNILEEVLR-RD-------------------------IEDQIEDAVKRGYLNTDSE 225
+ L + EE+ R +D ++ +IE + R + + +
Sbjct: 88 DRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDK 147
Query: 226 FLK----EDVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKS 281
L+ E V GS V AL+ + +VVSN GD RAV+ RG A L+ DH+P REDE +
Sbjct: 148 VLEAVASETV--GSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYA 205
Query: 282 RIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASD 341
RIE GG V G RV G LA+SR++GDR+LK ++I EPE + E E LILASD
Sbjct: 206 RIENAGGKVIQWQGA-RVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASD 264
Query: 342 GLWD 345
GLWD
Sbjct: 265 GLWD 268
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 123/244 (50%), Gaps = 51/244 (20%)
Query: 150 RGRREAMEDRFSA------------LVDFQG------HSKQAVFGIFDGHGGAKAAEFAA 191
+G R MED F+ + D +G H FG++DGHGG K A++
Sbjct: 22 QGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCR 81
Query: 192 ENLDKNILEEVLR-RD-------------------------IEDQIEDAVKRGYLNTDSE 225
+ L + EE+ R +D ++ +IE + R + + +
Sbjct: 82 DRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDK 141
Query: 226 FLK----EDVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKS 281
L+ E V GS V AL+ + +VVSN GD RAV+ RG A L+ DH+P REDE +
Sbjct: 142 VLEAVASETV--GSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYA 199
Query: 282 RIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASD 341
RIE GG V G RV G LA+SR++GDR+LK ++I EPE + E E LILASD
Sbjct: 200 RIENAGGKVIQWQGA-RVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASD 258
Query: 342 GLWD 345
GLWD
Sbjct: 259 GLWD 262
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 123/244 (50%), Gaps = 51/244 (20%)
Query: 150 RGRREAMEDRFSA------------LVDFQG------HSKQAVFGIFDGHGGAKAAEFAA 191
+G R MED F+ + D +G H FG++DGHGG K A++
Sbjct: 25 QGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCR 84
Query: 192 ENLDKNILEEVLR-RD-------------------------IEDQIEDAVKRGYLNTDSE 225
+ L + EE+ R +D ++ +IE + R + + +
Sbjct: 85 DRLHFALAEEIERIKDELSKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDK 144
Query: 226 FLK----EDVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKS 281
L+ E V GS V AL+ + +VVSN GD RAV+ RG A L+ DH+P REDE +
Sbjct: 145 VLEAVASETV--GSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYA 202
Query: 282 RIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASD 341
RIE GG V G RV G LA+SR++GDR+LK ++I EPE + E E LILASD
Sbjct: 203 RIENAGGKVIQWQGA-RVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASD 261
Query: 342 GLWD 345
GLWD
Sbjct: 262 GLWD 265
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 117/206 (56%), Gaps = 20/206 (9%)
Query: 151 GRREAMEDRFSALVDFQGHSKQAV-FGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIED 209
G+R+ EDRF DF + + + F ++DGHGG AA+F +++K I++ + + E
Sbjct: 17 GKRKENEDRF----DFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK---EK 69
Query: 210 QIEDAVKRGYLNTDSEF-----LKED---VYGGSCCVTALIQNGT-LVVSNAGDCRAVMS 260
+E + +L D F L D + G+ AL+++G LVV++ GD RA++
Sbjct: 70 NLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILC 129
Query: 261 RGGLAEALTSDHRPSREDEKSRIETMGGYVDLCH-GTWRVQGSLAVSRALGDRHLK-QWI 318
R G LT DH P R+DEK RI+ GG+V G V G LA++R++GD LK +
Sbjct: 130 RKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGV 189
Query: 319 IAEPETKIIRI-KPEYEFLILASDGL 343
IAEPETK I++ + FL+L +DG+
Sbjct: 190 IAEPETKRIKLHHADDSFLVLTTDGI 215
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 117/206 (56%), Gaps = 20/206 (9%)
Query: 151 GRREAMEDRFSALVDFQGHSKQAV-FGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIED 209
G+R+ EDRF DF + + + F ++DGHGG AA+F +++K I++ + + E
Sbjct: 131 GKRKENEDRF----DFAQLTDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPK---EK 183
Query: 210 QIEDAVKRGYLNTDSEF-----LKED---VYGGSCCVTALIQNGT-LVVSNAGDCRAVMS 260
+E + +L D F L D + G+ AL+++G LVV++ GD RA++
Sbjct: 184 NLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILC 243
Query: 261 RGGLAEALTSDHRPSREDEKSRIETMGGYVDLCH-GTWRVQGSLAVSRALGDRHLK-QWI 318
R G LT DH P R+DEK RI+ GG+V G V G LA++R++GD LK +
Sbjct: 244 RKGKPMKLTIDHTPERKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGV 303
Query: 319 IAEPETKIIRI-KPEYEFLILASDGL 343
IAEPETK I++ + FL+L +DG+
Sbjct: 304 IAEPETKRIKLHHADDSFLVLTTDGI 329
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 113/231 (48%), Gaps = 40/231 (17%)
Query: 150 RGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDK--NILEEVLRRDI 207
+G R + ED + +++F + + F ++DGHGGA+ A++ + +L +E R+
Sbjct: 31 QGWRISQEDAHNCILNFD--DQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRK-- 86
Query: 208 EDQIEDAVKRGYLNTDSEFLKEDVY--------------------GGSCCVTALIQNGTL 247
+ E A+K +L D+ L+E V G V AL+ L
Sbjct: 87 --EFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDL 144
Query: 248 VVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSR 307
V+NAGD R V+ R G A ++ DH+P E RIE GG V L RV G L +SR
Sbjct: 145 YVANAGDSRCVVCRNGKALEMSFDHKPEDTVEYQRIEKAGGRVTL---DGRVNGGLNLSR 201
Query: 308 ALGDRHLK---------QWIIAEPETKIIRIKPEYEFLILASDGLWDKVLS 349
A+GD K Q I A P+ + I + PE EF++LA DG+W+ + S
Sbjct: 202 AIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTS 252
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 111/230 (48%), Gaps = 34/230 (14%)
Query: 144 YSVYCKRGRREAMEDRFSALVDF-QGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEE- 201
Y + +G R MED +A+V G + F ++DGH G++ A + + +L ++I
Sbjct: 26 YGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNE 85
Query: 202 ----------VLRRDIEDQIEDAVKRGYLNTDSEFLKE--DVYGG-----SCCVTALIQN 244
L +E+ +++ ++ G+L D E+++ D+ G S V +I
Sbjct: 86 DFRAAGKSGSALELSVEN-VKNGIRTGFLKID-EYMRNFSDLRNGMDRSGSTAVGVMISP 143
Query: 245 GTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLA 304
+ N GD RAV+ R G T DH+P EK RI+ GG V + RV GSLA
Sbjct: 144 KHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMI----QRVNGSLA 199
Query: 305 VSRALGDRHLK---------QWIIAEPETKIIRIKPEYEFLILASDGLWD 345
VSRALGD K Q + EPE I E EF+ILA DG+WD
Sbjct: 200 VSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILAXDGIWD 249
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 109/227 (48%), Gaps = 32/227 (14%)
Query: 144 YSVYCKRGRREAMEDRFSALVDF-QGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEV 202
Y + +G R MED +A++ G + F ++DGH G++ A++ E+L +I
Sbjct: 24 YGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITN-- 81
Query: 203 LRRDIE--------DQIEDAVKRGYLNTDSEF--LKEDVYG----GSCCVTALIQNGTLV 248
+D + + +++ ++ G+L D + E +G GS V LI
Sbjct: 82 -NQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTY 140
Query: 249 VSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRA 308
N GD R ++ R T DH+PS EK RI+ GG V + RV GSLAVSRA
Sbjct: 141 FINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI----QRVNGSLAVSRA 196
Query: 309 LGDRHLK---------QWIIAEPETKII-RIKPEYEFLILASDGLWD 345
LGD K Q + EPE I R + + +F+ILA DG+WD
Sbjct: 197 LGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWD 243
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 109/227 (48%), Gaps = 32/227 (14%)
Query: 144 YSVYCKRGRREAMEDRFSALVDF-QGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEV 202
Y + +G R MED +A++ G + F ++DGH G++ A++ E+L +I
Sbjct: 24 YGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITN-- 81
Query: 203 LRRDIE--------DQIEDAVKRGYLNTDSEF--LKEDVYG----GSCCVTALIQNGTLV 248
+D + + +++ ++ G+L D + E +G GS V LI
Sbjct: 82 -NQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTY 140
Query: 249 VSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRA 308
N GD R ++ R T DH+PS EK RI+ GG V + RV GSLAVSRA
Sbjct: 141 FINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMI----QRVNGSLAVSRA 196
Query: 309 LGDRHLK---------QWIIAEPETKII-RIKPEYEFLILASDGLWD 345
LGD K Q + EPE I R + + +F+ILA DG+WD
Sbjct: 197 LGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWD 243
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 114/250 (45%), Gaps = 53/250 (21%)
Query: 145 SVYCKRGRREAMEDRFSALVDF-QGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILE--- 200
+++ G R+ EDRF+ G A FG+FDG G +FA+EN+ ++
Sbjct: 25 AIFTDIGGRKHQEDRFTLCPQLVPGRDDCAFFGVFDGTVG----DFASENVKDLVVPQLI 80
Query: 201 ---------EVLRRDIEDQ---------IEDAVKRGYLNTDSEFLK-----EDVYGGSCC 237
E LR D+ ++ AV Y N D+E +K Y S
Sbjct: 81 SSPAWQEVTEXLRSDVPATEVDEKLPQLLDQAVDDXYKNADNELVKXCEQLNKDYASSTS 140
Query: 238 VTALIQNGTLVVSNAGDCR---AVMSRGGL-AEALTSDHRPSREDEKSRIETMGGYVDLC 293
VTA++ G + V + GD R V + GL E LT DH+P EK RI GG V+
Sbjct: 141 VTAVLAKGFVAVGHLGDSRIAXGVETPNGLNCEFLTVDHKPDXPHEKLRIXRNGGSVEYL 200
Query: 294 H----------GTWRVQGS-------LAVSRALGDRHLKQWIIA-EPETKIIRIKPEYEF 335
H G + + S L SRA G + LK + ++ +P+ +++R+ P++
Sbjct: 201 HNHNNKPFIRGGDFSFRKSRGEQPXQLQYSRAFGGKDLKXYGLSNQPDVRVVRVTPQHRV 260
Query: 336 LILASDGLWD 345
ILA+DGLWD
Sbjct: 261 XILATDGLWD 270
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 228 KEDVYGGSCCVTALIQNGTLVVSNAGDCRAVM--SRGGLAEALTSDHRPSREDEKSRIET 285
++ + GS VTA+ N GD RA + S GGL L+ DH+P+ E SRIE
Sbjct: 165 QKTIPAGSFLVTAI---------NIGDSRATLIHSDGGLTR-LSKDHKPNHPTEASRIEK 214
Query: 286 MGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPE 332
GG V+ RV G LA+SRA GD K PE + + P+
Sbjct: 215 AGGSVE-TFDVPRVDGVLALSRAFGDSDFKXNPNLPPEEQKVIAVPD 260
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 14/107 (13%)
Query: 151 GRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNI--LEEVLRRDIE 208
GRR ED + +FDGH G +++ A++ K++ L E +
Sbjct: 22 GRRPTDEDAILVSAPATSRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLSEFTFAE-- 79
Query: 209 DQIEDAVKRGYLNTDSEFLK----EDVYGGSCCVTALIQNGTLVVSN 251
VK+ L+ D+E ++ + V G + + A+ + VV N
Sbjct: 80 ------VKKACLSLDAEIIRKLGPKHVAGSTGIIVAIERLSAPVVEN 120
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 48/223 (21%)
Query: 166 FQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNIL--------EEVLRRDIEDQIEDAVKR 217
F+ + ++G+F+G+ G + F A+ L +L E R + Q D V+R
Sbjct: 58 FRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVER 117
Query: 218 GYLNTDSEFLKE--------------DVYGGSCCVTALIQNGTLVVSNAGDCRAVMSR-- 261
+L + + L E ++ GG+ V A++ N L V+N G RA++ +
Sbjct: 118 SFLESIDDALAEKASLQLERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKST 177
Query: 262 --GGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSL---AVSRALGDRHLK- 315
G L DH EDE R+ +G L G + G + +R +GD +K
Sbjct: 178 VDGLQVTQLNVDHTTENEDELFRLSQLG----LDAGKIKQVGIICGQESTRRIGDYKVKY 233
Query: 316 -------------QWIIAEPETKIIR-IKPEYEFLILASDGLW 344
+ IIAEPE + + FL+L S+GL+
Sbjct: 234 GYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLY 276
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 101/264 (38%), Gaps = 70/264 (26%)
Query: 144 YSVYCKRGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNIL---- 199
YS K ED + + F+ + ++G+F+G+ G + F A+ L +L
Sbjct: 37 YSADGKGTESHPPEDSW---LKFRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQL 93
Query: 200 ----EEVLRRDIEDQIEDAVKRGYLNTDSEFLKE-------------------------- 229
E R + Q D V+R +L + + L E
Sbjct: 94 NAEHAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILE 153
Query: 230 -------DVYGGSCCVTALIQNGTLVVSNAGDCRAVMSR----GGLAEALTSDHRPSRED 278
++ GG+ V A++ N L V+N G RA++ + G L DH ED
Sbjct: 154 RLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENED 213
Query: 279 EKSRIETMGGYVDLCHGTWRVQGSL---AVSRALGDRHLK--------------QWIIAE 321
E R+ +G L G + G + +R +GD +K + IIAE
Sbjct: 214 ELFRLSQLG----LDAGKIKQVGIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAE 269
Query: 322 PETKIIR-IKPEYEFLILASDGLW 344
PE + + FL+L S+GL+
Sbjct: 270 PEIHGAQPLDGVTGFLVLMSEGLY 293
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 94/242 (38%), Gaps = 67/242 (27%)
Query: 166 FQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNIL--------EEVLRRDIEDQIEDAVKR 217
F+ + ++G+F+G+ G + F A+ L +L E R + Q D V+R
Sbjct: 58 FRSENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVER 117
Query: 218 GYLNTDSEFLKE---------------------------------DVYGGSCCVTALIQN 244
+L + + L E ++ GG+ V A++ N
Sbjct: 118 SFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLN 177
Query: 245 GTLVVSNAGDCRAVMSR----GGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQ 300
L V+N G RA++ + G L DH EDE R+ +G L G +
Sbjct: 178 NKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLG----LDAGKIKQV 233
Query: 301 GSL---AVSRALGDRHLK--------------QWIIAEPETKIIR-IKPEYEFLILASDG 342
G + +R +GD +K + IIAEPE + + FL+L S+G
Sbjct: 234 GIICGQESTRRIGDYKVKYGYTDIDLLSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEG 293
Query: 343 LW 344
L+
Sbjct: 294 LY 295
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 47/158 (29%)
Query: 233 GGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAE--------ALTSDHRPSREDEKSRI- 283
G + CV A + L V+N GD RA++ G+ E L++DH E E R+
Sbjct: 200 GATACV-AHVDGVDLHVANTGDSRAML---GVQEEDGSWSAVTLSNDHNAQNERELQRLK 255
Query: 284 -ETMGGYVDLCHGTWRVQGSLAVSRALGD------------------------------- 311
E R+ G L RA GD
Sbjct: 256 LEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIP 315
Query: 312 --RHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKV 347
H ++ AEPE R++P+ +FL+LA+DGLW+ +
Sbjct: 316 PNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETM 353
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 156 MEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAV 215
+EDR SA Q ++ + G+FDGH G ++ +E L I +L + +IE+AV
Sbjct: 52 IEDRRSATTCLQ--TRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAV 109
Query: 216 KRG 218
+ G
Sbjct: 110 ESG 112
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 65/158 (41%), Gaps = 47/158 (29%)
Query: 233 GGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAE--------ALTSDH--RPSREDEKSR 282
G + CV A + L V+N GD RA++ G+ E L++DH + RE E+ +
Sbjct: 200 GATACV-AHVDGVDLHVANTGDSRAML---GVQEEDGSWSAVTLSNDHNAQNEREVERLK 255
Query: 283 IETMGGYVDLCHGTWRVQGSLAVSRALGDRHLK--------------------------- 315
+E R+ G L RA GD K
Sbjct: 256 LEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIP 315
Query: 316 ------QWIIAEPETKIIRIKPEYEFLILASDGLWDKV 347
++ AEPE R++P+ +FL+LA+DGLW+ +
Sbjct: 316 PNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETM 353
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 156 MEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAV 215
+EDR SA Q ++ + G+FDGH G ++ +E L I +L + +IE+AV
Sbjct: 52 IEDRRSAATCLQ--TRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAV 109
Query: 216 KRG 218
+ G
Sbjct: 110 ESG 112
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase
Kinase Kinase 7 Interacting Protein 1 From Anopheles
Gambiae
Length = 358
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 21/153 (13%)
Query: 206 DIEDQIEDAVKRGYLNTDSEFLKEDVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLA 265
+I Q E+ +++ DS L + GS V ALI L + N G+CRA++ +
Sbjct: 132 EISQQFENVLQK----LDS--LNNALSVGSSAVLALIHRSHLYLGNIGNCRALLCKTDEH 185
Query: 266 EALT-----SDHRPSREDEKSRIETMGGYVDLCHG----TWRVQGSLAVSRALGDRHLKQ 316
+ LT DH +E +R+ +G G + R G+ D +
Sbjct: 186 DTLTVTQLSVDHNLLNAEEAARLFRLGLMAQNFEGVPLYSTRCIGNYLGKAGYKDCNFLS 245
Query: 317 WIIAEP---ETKI---IRIKPEYEFLILASDGL 343
AEP E +I I+I P FL+L S GL
Sbjct: 246 SATAEPVIFEPEIVGGIQITPACRFLVLMSSGL 278
>pdb|3RNR|A Chain A, Crystal Structure Of Stage Ii Sporulation E Family Protein
From Thermanaerovibrio Acidaminovorans
pdb|3RNR|B Chain B, Crystal Structure Of Stage Ii Sporulation E Family Protein
From Thermanaerovibrio Acidaminovorans
Length = 211
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 233 GGSCCVTAL-IQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSRE 277
G + V A+ +++GTL ++ GDCR + +GG L+ DH S E
Sbjct: 71 GATXAVAAVNLRDGTLEWASVGDCRVYLFKGGRLSRLSLDHNVSSE 116
>pdb|3D8K|A Chain A, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|B Chain B, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|C Chain C, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
pdb|3D8K|D Chain D, Crsytal Structure Of A Phosphatase From A Toxoplasma
Gondii
Length = 377
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 74/225 (32%), Gaps = 62/225 (27%)
Query: 148 CKRGRREAMEDRFSALV-----DFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEV 202
R RR E S V +G + V FDG G +A + A+N+ N L
Sbjct: 19 TSRNRRPTSESPHSDDVVVVEGXLRGRPETRVHAXFDGFQGRHSAXWLAQNV-XNYLN-- 75
Query: 203 LRRDIEDQIEDAVKRGYLNTDSEFLKEDVYGGSCCVTALIQN----------GTLVVSNA 252
D+ D E+ + R + D + ++ GGS + ++ G +V
Sbjct: 76 ---DLRDVNEEEITRQFERXDGDLRAANLPGGSSALIIFVRYEKKPTEARVVGRQIVPEG 132
Query: 253 G------------------------DCRA-----------------VMSRGGLAEALTSD 271
D RA V+ G A L++
Sbjct: 133 AKEFTSVAEALGGPLXPVVAXNFRRDPRAAKGIYTIHVASLGNSRCVLKSGRTAIHLSTP 192
Query: 272 HRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQ 316
H S E+ R++ GG +G + G + +RA G K+
Sbjct: 193 HTASSHKERHRVQAAGGVFTTVNGELLLGGVVPXTRAFGSFDFKK 237
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,419,196
Number of Sequences: 62578
Number of extensions: 308699
Number of successful extensions: 768
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 692
Number of HSP's gapped (non-prelim): 37
length of query: 365
length of database: 14,973,337
effective HSP length: 100
effective length of query: 265
effective length of database: 8,715,537
effective search space: 2309617305
effective search space used: 2309617305
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)