Query 017866
Match_columns 365
No_of_seqs 339 out of 1457
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 04:06:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017866.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017866hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0698 Serine/threonine prote 100.0 2.6E-46 5.7E-51 364.1 23.4 217 144-360 42-270 (330)
2 KOG0697 Protein phosphatase 1B 100.0 4.4E-46 9.5E-51 340.2 17.6 221 136-361 17-258 (379)
3 PF00481 PP2C: Protein phospha 100.0 8.7E-46 1.9E-50 348.0 19.8 214 144-361 2-229 (254)
4 PLN03145 Protein phosphatase 2 100.0 8.7E-45 1.9E-49 356.3 24.5 210 144-360 67-296 (365)
5 PTZ00224 protein phosphatase 2 100.0 1E-40 2.2E-45 328.7 23.9 207 138-359 19-236 (381)
6 COG0631 PTC1 Serine/threonine 100.0 4.1E-39 8.8E-44 304.2 17.4 201 144-358 10-220 (262)
7 KOG0699 Serine/threonine prote 100.0 2.4E-39 5.1E-44 305.0 15.6 126 232-360 329-463 (542)
8 KOG0700 Protein phosphatase 2C 100.0 1.1E-38 2.4E-43 307.0 18.3 206 153-361 82-358 (390)
9 cd00143 PP2Cc Serine/threonine 100.0 1.2E-34 2.7E-39 269.1 25.0 212 144-360 3-222 (254)
10 smart00332 PP2Cc Serine/threon 100.0 7.1E-34 1.5E-38 265.0 25.4 211 144-360 8-225 (255)
11 PRK14559 putative protein seri 100.0 1.5E-32 3.2E-37 285.0 18.7 191 144-346 377-586 (645)
12 KOG1323 Serine/threonine phosp 100.0 1.2E-28 2.6E-33 230.7 16.2 190 170-361 142-436 (493)
13 PF13672 PP2C_2: Protein phosp 99.9 8.7E-22 1.9E-26 179.5 14.5 181 147-362 3-197 (212)
14 KOG1379 Serine/threonine prote 99.8 3.6E-20 7.9E-25 173.8 14.0 176 154-361 89-274 (330)
15 KOG0618 Serine/threonine phosp 99.8 3.2E-20 6.8E-25 193.8 11.3 217 139-363 520-745 (1081)
16 smart00331 PP2C_SIG Sigma fact 99.8 3.5E-17 7.7E-22 146.9 16.9 159 153-360 14-176 (193)
17 TIGR02865 spore_II_E stage II 99.3 1E-10 2.2E-15 125.7 18.5 158 151-358 562-727 (764)
18 PF07228 SpoIIE: Stage II spor 99.0 3.5E-08 7.6E-13 88.1 16.9 134 170-350 2-141 (193)
19 COG2208 RsbU Serine phosphatas 97.1 0.021 4.5E-07 56.6 15.5 154 155-358 161-328 (367)
20 KOG0260 RNA polymerase II, lar 82.5 7.7 0.00017 43.7 9.5 7 9-15 1483-1489(1605)
21 KOG0260 RNA polymerase II, lar 76.2 16 0.00035 41.3 9.5 7 10-16 1463-1469(1605)
22 PRK10693 response regulator of 46.6 1.6E+02 0.0034 28.2 9.7 47 219-265 211-259 (303)
23 PF09436 DUF2016: Domain of un 38.6 18 0.00039 27.4 1.3 22 329-350 23-44 (72)
24 PRK05457 heat shock protein Ht 33.2 1.1E+02 0.0024 29.3 6.1 34 322-356 105-138 (284)
25 COG4004 Uncharacterized protei 27.9 2.4E+02 0.0051 22.4 5.9 43 318-363 36-78 (96)
26 PF13649 Methyltransf_25: Meth 26.7 57 0.0012 25.3 2.5 28 336-363 70-97 (101)
27 PF01436 NHL: NHL repeat; Int 23.0 1.5E+02 0.0032 17.6 3.3 22 239-260 7-28 (28)
28 COG3315 O-Methyltransferase in 21.8 1.9E+02 0.0041 27.9 5.5 95 254-363 104-199 (297)
No 1
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-46 Score=364.13 Aligned_cols=217 Identities=51% Similarity=0.789 Sum_probs=197.4
Q ss_pred EEEEeecCCCCCCCceEEEecccC----CCC-ceeEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHH
Q 017866 144 YSVYCKRGRREAMEDRFSALVDFQ----GHS-KQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRG 218 (365)
Q Consensus 144 ~~~~s~~G~R~~nEDa~~v~~~~~----~~~-~~~lf~V~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~i~~al~~a 218 (365)
++.++.+|+|..|||++.....+. +.. +..||||||||||..+|+|+.++|+..+.++..........+++++++
T Consensus 42 ~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~~ 121 (330)
T KOG0698|consen 42 GSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRRA 121 (330)
T ss_pred eEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHH
Confidence 667799999999999999887643 233 589999999999999999999999999999887655335789999999
Q ss_pred HH-hcchhhhhh---ccCCCceeEEEEEECC-eEEEEEecccceEEEcCC-ceEEcCCCCCCCCHHHHHHHHHcCCeeec
Q 017866 219 YL-NTDSEFLKE---DVYGGSCCVTALIQNG-TLVVSNAGDCRAVMSRGG-LAEALTSDHRPSREDEKSRIETMGGYVDL 292 (365)
Q Consensus 219 ~~-~~d~~l~~~---~~~~GtT~v~ali~~~-~l~vAnvGDSRa~l~r~g-~~~~LT~DHt~~~~~E~~ri~~~gg~v~~ 292 (365)
|. ++|.++.+. ...+|+|++++++.++ +|||||+|||||||+++| .+++||.||+|.+++|++||+++||++..
T Consensus 122 F~~~~D~~~~~~~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~v~~ 201 (330)
T KOG0698|consen 122 FLTKTDSEFLEKREDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGGRVSN 201 (330)
T ss_pred HHHHHHHHHHhhccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCCEEEE
Confidence 99 699999975 4678999999888866 999999999999999865 89999999999999999999999999998
Q ss_pred cCCceeecCCcchhhcccccccC-CceeeeeEEEEEEecCCCeEEEEEcCccCCCCChHHHHHHHHhhh
Q 017866 293 CHGTWRVQGSLAVSRALGDRHLK-QWIIAEPETKIIRIKPEYEFLILASDGLWDKVLSWKPFLSVNYFA 360 (365)
Q Consensus 293 ~~g~~rv~g~l~vtRalGd~~~k-~~v~~~Pdi~~~~l~~~~~fLILaSDGlwd~ls~~ei~~iv~~~~ 360 (365)
..+.||++|.|+++|+|||..+| ++|+++||+....+..+++|||||||||||+|++||++++|+..+
T Consensus 202 ~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~ 270 (330)
T KOG0698|consen 202 WGGVWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDEL 270 (330)
T ss_pred cCCcceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHh
Confidence 88899999999999999999999 889999999999999989999999999999999999999999853
No 2
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-46 Score=340.18 Aligned_cols=221 Identities=34% Similarity=0.492 Sum_probs=195.4
Q ss_pred eecccCceEEEEeecCCCCCCCceEEEecccC-CCCceeEEEEEcCCCCchHHHHHHHHHHHHHHHHHH--h---cChhH
Q 017866 136 VEDERDGFYSVYCKRGRREAMEDRFSALVDFQ-GHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVL--R---RDIED 209 (365)
Q Consensus 136 ~~~~~~~~~~~~s~~G~R~~nEDa~~v~~~~~-~~~~~~lf~V~DGhGG~~~a~~as~~l~~~l~~~~~--~---~~~~~ 209 (365)
-+.++.. |++.++||||-+|||++.+...+. +-++|.||+|||||.|++++++|+++|.+.+...-. . ....+
T Consensus 17 G~GNglr-yg~SSMQGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gsv~ 95 (379)
T KOG0697|consen 17 GEGNGLR-YGVSSMQGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGSVE 95 (379)
T ss_pred CcCCcee-eeeccccchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCcHH
Confidence 4455555 999999999999999999876543 346799999999999999999999999998876432 2 11256
Q ss_pred HHHHHHHHHHHhcchhhhhh------ccCCCceeEEEEEECCeEEEEEecccceEEEcCCceEEcCCCCCCCCHHHHHHH
Q 017866 210 QIEDAVKRGYLNTDSEFLKE------DVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRI 283 (365)
Q Consensus 210 ~i~~al~~a~~~~d~~l~~~------~~~~GtT~v~ali~~~~l~vAnvGDSRa~l~r~g~~~~LT~DHt~~~~~E~~ri 283 (365)
.+++.|+..|+++|+.+... ..++|+|++.+++...++|++|+||||++|+|+|+++.-|.||+|..+.|++||
T Consensus 96 ~~~~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng~~~f~TqDHKP~~p~EkeRI 175 (379)
T KOG0697|consen 96 NVEKGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNGEVVFSTQDHKPYLPKEKERI 175 (379)
T ss_pred HHHhhHhhcceeHHHHHhhhhhhhcccccCCceEEEEEecCceEEEEecCcchhheecCCceEEeccCCCCCChHHHHHH
Confidence 88999999999999887643 336899999999999999999999999999999999999999999999999999
Q ss_pred HHcCCeeeccCCceeecCCcchhhcccccccC---------CceeeeeEEEEEEecCCCeEEEEEcCccCCCCChHHHHH
Q 017866 284 ETMGGYVDLCHGTWRVQGSLAVSRALGDRHLK---------QWIIAEPETKIIRIKPEYEFLILASDGLWDKVLSWKPFL 354 (365)
Q Consensus 284 ~~~gg~v~~~~g~~rv~g~l~vtRalGd~~~k---------~~v~~~Pdi~~~~l~~~~~fLILaSDGlwd~ls~~ei~~ 354 (365)
+.+||.|... |++|.|+++|+|||+.+| +.|+++|+|..+.....|+||||||||+||+|+++|+.+
T Consensus 176 qnAGGSVMIq----RvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~eedeFivlACDGIwDVMtneelce 251 (379)
T KOG0697|consen 176 QNAGGSVMIQ----RVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEEDEFIVLACDGIWDVMTNEELCE 251 (379)
T ss_pred hcCCCeEEEE----EecceeeeehhccCcccccCCCCCchhcccCCCCceEEeeccccCcEEEEEccchhhhcccHHHHH
Confidence 9999998865 999999999999999998 469999999999998889999999999999999999999
Q ss_pred HHHhhhc
Q 017866 355 SVNYFAC 361 (365)
Q Consensus 355 iv~~~~~ 361 (365)
.|+.=+.
T Consensus 252 fv~sRl~ 258 (379)
T KOG0697|consen 252 FVKSRLE 258 (379)
T ss_pred HHHhhhe
Confidence 9987443
No 3
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=100.00 E-value=8.7e-46 Score=347.96 Aligned_cols=214 Identities=43% Similarity=0.669 Sum_probs=185.2
Q ss_pred EEEEeecCCCCCCCceEEEecccC---CCCceeEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHH
Q 017866 144 YSVYCKRGRREAMEDRFSALVDFQ---GHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYL 220 (365)
Q Consensus 144 ~~~~s~~G~R~~nEDa~~v~~~~~---~~~~~~lf~V~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~i~~al~~a~~ 220 (365)
|++.+.+|+|..|||++++..++. +..+..+|+|||||||..+++++++++.+.+.+...... ...+.++|+.+|.
T Consensus 2 ~~~~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~-~~~~~~al~~a~~ 80 (254)
T PF00481_consen 2 YGVSSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSEAAEYASQNLPEFLKENLSFND-GNDIEEALRQAFL 80 (254)
T ss_dssp EEEEEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHT-CHHHHHHHHHHHH
T ss_pred cCeecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChhhHHHHHHHHHHHHHhhccccc-ccchhhcccceee
Confidence 789999999999999999998764 456789999999999999999999999988887766544 3378999999999
Q ss_pred h-cchhhhh-----hccCCCceeEEEEEECCeEEEEEecccceEEEcCCceE-EcCCCCCCCCHHHHHHHHHcCCeeecc
Q 017866 221 N-TDSEFLK-----EDVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAE-ALTSDHRPSREDEKSRIETMGGYVDLC 293 (365)
Q Consensus 221 ~-~d~~l~~-----~~~~~GtT~v~ali~~~~l~vAnvGDSRa~l~r~g~~~-~LT~DHt~~~~~E~~ri~~~gg~v~~~ 293 (365)
+ +++.+.+ ....+|||+++++|.+++||+|||||||+||++++... +||.||++.++.|++||+++||.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~GsTa~v~li~~~~l~vanvGDSravl~~~~~~~~~Lt~dH~~~~~~E~~RI~~~gg~v~~- 159 (254)
T PF00481_consen 81 AFTDESLYSDSENNESSKSGSTATVALIDGNKLYVANVGDSRAVLCRNGGIIKQLTRDHKPSNPDERERIRKAGGRVSE- 159 (254)
T ss_dssp HHHHHHHHHHHHHHTHTTSEEEEEEEEEETTEEEEEEESS-EEEEEETTEEEEESS---STTSHHHHHHHHHTT-GEEE-
T ss_pred ecccccccccccccccccccccccccccccceeEEEeeeeeeeeeeeccccccccccccccchhhccceeecccccccc-
Confidence 9 8888876 35689999999999999999999999999999999888 99999999999999999999999986
Q ss_pred CCceeecCCcchhhcccccccCC----ceeeeeEEEEEEecCCCeEEEEEcCccCCCCChHHHHHHHHhhhc
Q 017866 294 HGTWRVQGSLAVSRALGDRHLKQ----WIIAEPETKIIRIKPEYEFLILASDGLWDKVLSWKPFLSVNYFAC 361 (365)
Q Consensus 294 ~g~~rv~g~l~vtRalGd~~~k~----~v~~~Pdi~~~~l~~~~~fLILaSDGlwd~ls~~ei~~iv~~~~~ 361 (365)
.+|+.|.+++||+|||..+|+ +|+++|++..+++.++++|||||||||||+|+++|+++++++..+
T Consensus 160 --~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~flvlaSDGlwd~l~~~ei~~~v~~~~~ 229 (254)
T PF00481_consen 160 --NGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFLVLASDGLWDVLSNEEIVDIVRESLN 229 (254)
T ss_dssp --TEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEEEEE-HHHHTTSHHHHHHHHHHHHHH
T ss_pred --chhhhhccccccccccccccccccceeeeecccccccccccceEEEEEcccccccCCHHHHHHHHHHHHh
Confidence 569999999999999999998 899999999999999878999999999999999999999998765
No 4
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=8.7e-45 Score=356.26 Aligned_cols=210 Identities=38% Similarity=0.620 Sum_probs=183.8
Q ss_pred EEEEeecCCCCCCCceEEEecccCC--------CCceeEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChhHHHHHHH
Q 017866 144 YSVYCKRGRREAMEDRFSALVDFQG--------HSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAV 215 (365)
Q Consensus 144 ~~~~s~~G~R~~nEDa~~v~~~~~~--------~~~~~lf~V~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~i~~al 215 (365)
++.+|++|.|..|||++++..++.. .....||||||||||+.+|++|++++++.|.+... ....+.++|
T Consensus 67 ~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~---~~~~~~~al 143 (365)
T PLN03145 67 SGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDED---FPREIEKVV 143 (365)
T ss_pred EEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhc---cchhHHHHH
Confidence 6899999999999999988664321 12358999999999999999999999998876422 134678899
Q ss_pred HHHHHhcchhhhhh-----ccCCCceeEEEEEECCeEEEEEecccceEEEcCCceEEcCCCCCCCCHHHHHHHHHcCCee
Q 017866 216 KRGYLNTDSEFLKE-----DVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYV 290 (365)
Q Consensus 216 ~~a~~~~d~~l~~~-----~~~~GtT~v~ali~~~~l~vAnvGDSRa~l~r~g~~~~LT~DHt~~~~~E~~ri~~~gg~v 290 (365)
+++|..+|+++.+. ...+|||+++++|.++++|||||||||+|++|+|++++||+||++.++.|++||++.||.+
T Consensus 144 ~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg~v 223 (365)
T PLN03145 144 SSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGYV 223 (365)
T ss_pred HHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCCce
Confidence 99999999998764 2358999999999999999999999999999999999999999999999999999999998
Q ss_pred eccCCceeecCCcchhhcccccccCC-------ceeeeeEEEEEEecCCCeEEEEEcCccCCCCChHHHHHHHHhhh
Q 017866 291 DLCHGTWRVQGSLAVSRALGDRHLKQ-------WIIAEPETKIIRIKPEYEFLILASDGLWDKVLSWKPFLSVNYFA 360 (365)
Q Consensus 291 ~~~~g~~rv~g~l~vtRalGd~~~k~-------~v~~~Pdi~~~~l~~~~~fLILaSDGlwd~ls~~ei~~iv~~~~ 360 (365)
.. +|+.|.+++||+|||..+|. .++++||+..++|.++|+|||||||||||+|+++|++++++..+
T Consensus 224 ~~----g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v~~i~~~l 296 (365)
T PLN03145 224 YD----GYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAVDFARRRL 296 (365)
T ss_pred ec----ceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHHHHHHHHH
Confidence 64 38889999999999988863 37899999999999989999999999999999999988886643
No 5
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=1e-40 Score=328.69 Aligned_cols=207 Identities=31% Similarity=0.475 Sum_probs=176.3
Q ss_pred cccCceEEEEeecCCCCCCCceEEEecccCCCCceeEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHH
Q 017866 138 DERDGFYSVYCKRGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKR 217 (365)
Q Consensus 138 ~~~~~~~~~~s~~G~R~~nEDa~~v~~~~~~~~~~~lf~V~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~i~~al~~ 217 (365)
..... |+..+++|+|+.|||++++... ++..||||||||||..+++++++.+.+.+.+... ....+.|++
T Consensus 19 ~~~~~-~g~~s~~G~R~~nED~~~v~~~----~~~~lfgVfDGHgG~~~S~~~~~~l~~~l~~~~~-----~~~~~~l~~ 88 (381)
T PTZ00224 19 NSIFR-CASACVNGYRESMEDAHLLYLT----DDWGFFGVFDGHVNDECSQYLARAWPQALEKEPE-----PMTDERMEE 88 (381)
T ss_pred CccEE-EEEEeCCCCCCCCCCeeEeccC----CCceEEEEEeCCCcHHHHHHHHHHHHHHHHhccc-----cccHHHHHH
Confidence 34455 8999999999999999887543 3457999999999999999999988876643211 112355889
Q ss_pred HHHhcchhhhhhccCCCceeEEEEEE-CCeEEEEEecccceEEEcCCceEEcCCCCCCCCHHHHHHHHHcCCeeeccCCc
Q 017866 218 GYLNTDSEFLKEDVYGGSCCVTALIQ-NGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGT 296 (365)
Q Consensus 218 a~~~~d~~l~~~~~~~GtT~v~ali~-~~~l~vAnvGDSRa~l~r~g~~~~LT~DHt~~~~~E~~ri~~~gg~v~~~~g~ 296 (365)
+|..+|+++.+....+|||+++++|. +++++||||||||+|++|+|++++||+||++.++.|++||...||.+..
T Consensus 89 a~~~~d~~i~~~~~~~GsTatv~lI~~~~~l~vaNVGDSRayl~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~---- 164 (381)
T PTZ00224 89 LCLEIDEEWMDSGREGGSTGTFCVIMKDVHLQVGNVGDSRVLVCRDGKLVFATEDHKPNNPGERQRIEACGGRVVS---- 164 (381)
T ss_pred HHHHHHHHHHhcccCCCCeEEEEEEEECCEEEEEEcccceEEEEECCEEEEcccCCCCCCHHHHhHHHHccCEecc----
Confidence 99999999988777789999988876 5789999999999999999999999999999999999999999998864
Q ss_pred eeecCCcchhhcccccccC---------CceeeeeEEEEEEecCCCeEEEEEcCccCC-CCChHHHHHHHHhh
Q 017866 297 WRVQGSLAVSRALGDRHLK---------QWIIAEPETKIIRIKPEYEFLILASDGLWD-KVLSWKPFLSVNYF 359 (365)
Q Consensus 297 ~rv~g~l~vtRalGd~~~k---------~~v~~~Pdi~~~~l~~~~~fLILaSDGlwd-~ls~~ei~~iv~~~ 359 (365)
+|+.|.+++||+|||..+| +.|+++||+..+++.+ +|||||||||||| +|+++||+++|++.
T Consensus 165 ~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~-~D~llLaSDGL~d~~ls~eEi~~iv~~~ 236 (381)
T PTZ00224 165 NRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQS-NDFIILACDGVFEGNFSNEEVVAFVKEQ 236 (381)
T ss_pred ccccCceeeecccCCcccccccccccccCcceeeeEEEEEECCC-CCEEEEECCCcCcCccCHHHHHHHHHHH
Confidence 3889999999999997654 3578999999999987 7899999999999 89999999999753
No 6
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-39 Score=304.21 Aligned_cols=201 Identities=29% Similarity=0.376 Sum_probs=173.5
Q ss_pred EEEEeecCC-CCCCCceEEEecccCCCCceeEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChh---HHHHHHHHHHH
Q 017866 144 YSVYCKRGR-REAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIE---DQIEDAVKRGY 219 (365)
Q Consensus 144 ~~~~s~~G~-R~~nEDa~~v~~~~~~~~~~~lf~V~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~---~~i~~al~~a~ 219 (365)
++..++.|. |..|||++.+..+..+.. ..||+|||||||++++++|++.+++.|.+.+...... +.+.+.|.+++
T Consensus 10 ~~~~s~~g~~R~~NeD~~~~~~~~~~~~-~~l~~V~DG~GGh~~ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~~l~~~~ 88 (262)
T COG0631 10 VAGLSDVGTVRKHNEDAFLIKPNENGNL-LLLFAVADGMGGHAAGEVASKLAVEALARLFDETNFNSLNESLEELLKEAI 88 (262)
T ss_pred eeeeccCCCccCCCCcceeeccccCCcc-eeEEEEEeCccchhHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHH
Confidence 555566665 889999999987644444 6799999999999999999999999999998764321 11688999999
Q ss_pred Hhcchhhhhhc------cCCCceeEEEEEECCeEEEEEecccceEEEcCCceEEcCCCCCCCCHHHHHHHHHcCCeeecc
Q 017866 220 LNTDSEFLKED------VYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLC 293 (365)
Q Consensus 220 ~~~d~~l~~~~------~~~GtT~v~ali~~~~l~vAnvGDSRa~l~r~g~~~~LT~DHt~~~~~E~~ri~~~gg~v~~~ 293 (365)
..+++++.+.. ..||||++++++.++++|+|||||||+||+|+|++++||.||++.+++++.|+...++....
T Consensus 89 ~~~n~~i~~~~~~~~~~~~mgtTl~~~~~~~~~l~~a~vGDSR~yl~~~~~~~~lT~DH~~~~~~~~~~~~~~~~~~~~- 167 (262)
T COG0631 89 LKANEAIAEEGQLNEDVRGMGTTLVLLLIRGNKLYVANVGDSRAYLLRDGELKQLTEDHSLVNRLEQRGIITPEEARSH- 167 (262)
T ss_pred HHHHHHHHHhhhcccccCCCceeEEEEEEECCeEEEEEccCCeEEEEcCCceEEeccCCcHHHHHHHhcCCCHHHHHhC-
Confidence 99999887653 47899999999999999999999999999999999999999999999999998887766543
Q ss_pred CCceeecCCcchhhcccccccCCceeeeeEEEEEEecCCCeEEEEEcCccCCCCChHHHHHHHHh
Q 017866 294 HGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVLSWKPFLSVNY 358 (365)
Q Consensus 294 ~g~~rv~g~l~vtRalGd~~~k~~v~~~Pdi~~~~l~~~~~fLILaSDGlwd~ls~~ei~~iv~~ 358 (365)
+..+++||+||+... .+|++...++++ ++|||||||||||.++++||+++|+.
T Consensus 168 ------~~~~~ltralG~~~~-----~~p~~~~~~~~~-~d~llL~SDGl~d~v~~~~i~~il~~ 220 (262)
T COG0631 168 ------PRRNALTRALGDFDL-----LEPDITELELEP-GDFLLLCSDGLWDVVSDDEIVDILKN 220 (262)
T ss_pred ------ccchhhhhhcCCCcc-----cceeEEEEEcCC-CCEEEEECCCCccCcCHHHHHHHHhc
Confidence 233489999999985 689999999999 59999999999999999999999985
No 7
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-39 Score=305.04 Aligned_cols=126 Identities=41% Similarity=0.648 Sum_probs=120.1
Q ss_pred CCCceeEEEEEECCeEEEEEecccceEEEcCCceEEcCCCCCCCCHHHHHHHHHcCCeeeccCCceeecCCcchhhcccc
Q 017866 232 YGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGD 311 (365)
Q Consensus 232 ~~GtT~v~ali~~~~l~vAnvGDSRa~l~r~g~~~~LT~DHt~~~~~E~~ri~~~gg~v~~~~g~~rv~g~l~vtRalGd 311 (365)
.+|||+++|+|.+.+|||||.||||+|++|+|+++-|+.||+|..+.|..||+.+||+|... +||+|.|.++|+|||
T Consensus 329 DSGtTAvVcLv~g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlD---GRVNGGLNLSRA~GD 405 (542)
T KOG0699|consen 329 DSGTTAVVCLVGGDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLD---GRVNGGLNLSRAFGD 405 (542)
T ss_pred CCCceEEEEEecCceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeec---ceecCccchhhhhhh
Confidence 46999999999999999999999999999999999999999999999999999999999865 499999999999999
Q ss_pred cccC---------CceeeeeEEEEEEecCCCeEEEEEcCccCCCCChHHHHHHHHhhh
Q 017866 312 RHLK---------QWIIAEPETKIIRIKPEYEFLILASDGLWDKVLSWKPFLSVNYFA 360 (365)
Q Consensus 312 ~~~k---------~~v~~~Pdi~~~~l~~~~~fLILaSDGlwd~ls~~ei~~iv~~~~ 360 (365)
..|| +.|++-|||....|+++++|+||||||||++|+.||++++|+..+
T Consensus 406 HaYK~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l 463 (542)
T KOG0699|consen 406 HAYKKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLL 463 (542)
T ss_pred hhhhcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHH
Confidence 9998 368899999999999999999999999999999999999998754
No 8
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=307.01 Aligned_cols=206 Identities=37% Similarity=0.615 Sum_probs=174.8
Q ss_pred CCCCCceEEEecccCCCCceeEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhc---------------------------
Q 017866 153 REAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRR--------------------------- 205 (365)
Q Consensus 153 R~~nEDa~~v~~~~~~~~~~~lf~V~DGhGG~~~a~~as~~l~~~l~~~~~~~--------------------------- 205 (365)
...-||++-+.... ..++.|+||||||||..+++|.+++|..++..++...
T Consensus 82 ~~~~edrv~~~~s~--~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~ 159 (390)
T KOG0700|consen 82 GKAEEDRVSVAVSE--ENGWLFVGIYDGHGGPDASRFLSDHLYPYVARELQGLLWQDEERFPSEYKSEELEHLLVYWKQL 159 (390)
T ss_pred CCcccCcceeeeec--cCCeEEEEEecCCCCccHHHHHHHHHHHHHHHHhhhhhhhhccccccccccchhhhhhhhhhcc
Confidence 45567777766543 3567899999999999999999999999998554320
Q ss_pred ---Ch-hHHHHHHHHHHHHhcchhhhhhc----------cCCCceeEEEEEECCeEEEEEecccceEEEc---CC---ce
Q 017866 206 ---DI-EDQIEDAVKRGYLNTDSEFLKED----------VYGGSCCVTALIQNGTLVVSNAGDCRAVMSR---GG---LA 265 (365)
Q Consensus 206 ---~~-~~~i~~al~~a~~~~d~~l~~~~----------~~~GtT~v~ali~~~~l~vAnvGDSRa~l~r---~g---~~ 265 (365)
+. ...+.++|.+||.+++++|.+.. ..+|+||+++++.++.|||||+|||||+|.+ +| .+
T Consensus 160 ~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A 239 (390)
T KOG0700|consen 160 SSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVGLIKGGDLYVANVGDSRAVLGVVENNGSWLVA 239 (390)
T ss_pred cccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEEEEeCCeEEEEecCcchhhhceecCCCCeEEE
Confidence 00 35688999999999999986531 2679999999999999999999999999965 33 58
Q ss_pred EEcCCCCCCCCHHHHHHHHHcCC---eeeccCCceeecCCcchhhcccccccC---------------------Cceeee
Q 017866 266 EALTSDHRPSREDEKSRIETMGG---YVDLCHGTWRVQGSLAVSRALGDRHLK---------------------QWIIAE 321 (365)
Q Consensus 266 ~~LT~DHt~~~~~E~~ri~~~gg---~v~~~~g~~rv~g~l~vtRalGd~~~k---------------------~~v~~~ 321 (365)
+|||.||+..+++|++||+.... .+.. .+.||+.|.+.++|||||..+| |+++++
T Consensus 240 ~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv-~~~~RvkG~L~vsRAfGd~~lK~~~~n~e~l~~~fr~~~~~t~Pyltae 318 (390)
T KOG0700|consen 240 VQLSTDHNASNEDEVRRIRSEHPDDPHIVV-NKHWRVKGILQVSRAFGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAE 318 (390)
T ss_pred EecChhhccccHHHHHHHHHhCCCCcceEe-eccceeeEEEEeeeeccceeecchhhccchhHhhcCCCCCCCCCceecc
Confidence 99999999999999999999865 2222 2349999999999999999998 579999
Q ss_pred eEEEEEEecCCCeEEEEEcCccCCCCChHHHHHHHHhhhc
Q 017866 322 PETKIIRIKPEYEFLILASDGLWDKVLSWKPFLSVNYFAC 361 (365)
Q Consensus 322 Pdi~~~~l~~~~~fLILaSDGlwd~ls~~ei~~iv~~~~~ 361 (365)
|+|+.++|.++|.|||||||||||+|+|||++++|..|..
T Consensus 319 P~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~ 358 (390)
T KOG0700|consen 319 PSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFIS 358 (390)
T ss_pred ceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999754
No 9
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=1.2e-34 Score=269.12 Aligned_cols=212 Identities=42% Similarity=0.640 Sum_probs=184.8
Q ss_pred EEEEeecCCCCCCCceEEEecccCCCCceeEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcC--hhHHHHHHHHHHHHh
Q 017866 144 YSVYCKRGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRD--IEDQIEDAVKRGYLN 221 (365)
Q Consensus 144 ~~~~s~~G~R~~nEDa~~v~~~~~~~~~~~lf~V~DGhGG~~~a~~as~~l~~~l~~~~~~~~--~~~~i~~al~~a~~~ 221 (365)
++..+.+|.|..|||++++...... .+..+|+|||||||+..+++|++.+++.+.+.+.... ....+.+.|+++|.+
T Consensus 3 ~~~~~~~g~r~~neD~~~~~~~~~~-~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (254)
T cd00143 3 AGVSDKGGDRKTNEDAVVIKPNLNN-EDGGLFGVFDGHGGHAAGEFASKLLVEELLEELEETLTLSEEDIEEALRKAFLR 81 (254)
T ss_pred eeeecCCCCCCCCcceEEEeccCCC-CCcEEEEEEcCCChHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHH
Confidence 6677888899999999998765211 2468999999999999999999999999998877543 156778899999999
Q ss_pred cchhhhhhc------cCCCceeEEEEEECCeEEEEEecccceEEEcCCceEEcCCCCCCCCHHHHHHHHHcCCeeeccCC
Q 017866 222 TDSEFLKED------VYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHG 295 (365)
Q Consensus 222 ~d~~l~~~~------~~~GtT~v~ali~~~~l~vAnvGDSRa~l~r~g~~~~LT~DHt~~~~~E~~ri~~~gg~v~~~~g 295 (365)
+++++.+.. ..+|||++++++.+++++++|+||||+|++|+++++++|.||++.++.++.||...++++..
T Consensus 82 ~~~~l~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~~~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~--- 158 (254)
T cd00143 82 ADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGDSRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVSN--- 158 (254)
T ss_pred HHHHHHHhhhhccCCCCCCCcEEEEEEECCEEEEEEecCcEEEEEcCCceeEcCCCCCCcChHHHHHHHHcCCcEEe---
Confidence 999987653 57899999999999999999999999999999999999999999999999999999987642
Q ss_pred ceeecCCcchhhcccccccCCceeeeeEEEEEEecCCCeEEEEEcCccCCCCChHHHHHHHHhhh
Q 017866 296 TWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVLSWKPFLSVNYFA 360 (365)
Q Consensus 296 ~~rv~g~l~vtRalGd~~~k~~v~~~Pdi~~~~l~~~~~fLILaSDGlwd~ls~~ei~~iv~~~~ 360 (365)
.+.++...++|+||+..+|+.+..+|++..+.+.+.+++||||||||||+++++||.+++....
T Consensus 159 -~~~~~~~~~t~~lG~~~~~~~~~~~~~~~~~~l~~~~d~ill~SDG~~~~l~~~~i~~~~~~~~ 222 (254)
T cd00143 159 -GRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVRSEL 222 (254)
T ss_pred -CEEcCceeeccccCCccccCCEEcCCeEEEEEeCCCCcEEEEECCCCeeccChHHHHHHHHHHh
Confidence 2667788999999999988888899999999993348899999999999999999999998643
No 10
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=100.00 E-value=7.1e-34 Score=264.99 Aligned_cols=211 Identities=43% Similarity=0.693 Sum_probs=183.3
Q ss_pred EEEEeecCCCCCCCceEEEecccCCCCceeEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcCh-hHHHHHHHHHHHHhc
Q 017866 144 YSVYCKRGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDI-EDQIEDAVKRGYLNT 222 (365)
Q Consensus 144 ~~~~s~~G~R~~nEDa~~v~~~~~~~~~~~lf~V~DGhGG~~~a~~as~~l~~~l~~~~~~~~~-~~~i~~al~~a~~~~ 222 (365)
++..+.+|+|..|||++++..+.. .+..+|+|||||||..+++++++.+.+.+.+....... ...+.+.|++++.++
T Consensus 8 ~~~~~~~~~r~~neD~~~~~~~~~--~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 85 (255)
T smart00332 8 YGLSSMQGVRKPMEDAHVITPDLS--DSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKAFLKT 85 (255)
T ss_pred EEEecCCCCCCCCcceEEEeccCC--CCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHH
Confidence 667788899999999999876431 45689999999999999999999999888776543321 246888899999999
Q ss_pred chhhhhhc------cCCCceeEEEEEECCeEEEEEecccceEEEcCCceEEcCCCCCCCCHHHHHHHHHcCCeeeccCCc
Q 017866 223 DSEFLKED------VYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGT 296 (365)
Q Consensus 223 d~~l~~~~------~~~GtT~v~ali~~~~l~vAnvGDSRa~l~r~g~~~~LT~DHt~~~~~E~~ri~~~gg~v~~~~g~ 296 (365)
++++.+.. ..+|||++++++.+++++++|+||||+|++|++++++||.||++.++.|..||...++.+...
T Consensus 86 ~~~~~~~~~~~~~~~~~gtT~~~~~~~~~~l~~~~vGDsr~y~~~~~~~~~lt~dh~~~~~~~~~~i~~~~~~~~~~--- 162 (255)
T smart00332 86 DEEILEELESLEEDAGSGSTAVVALISGNKLYVANVGDSRAVLCRNGKAVQLTEDHKPSNEDERARIEAAGGFVING--- 162 (255)
T ss_pred HHHHHHhhhhccCCCCCCccEEEEEEECCEEEEEeccCceEEEEeCCceeEcCCCCCCcCHHHHHHHHHcCCEEECC---
Confidence 99887642 367999999999999999999999999999999999999999999999999999999987642
Q ss_pred eeecCCcchhhcccccccCCceeeeeEEEEEEecCCCeEEEEEcCccCCCCChHHHHHHHHhhh
Q 017866 297 WRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVLSWKPFLSVNYFA 360 (365)
Q Consensus 297 ~rv~g~l~vtRalGd~~~k~~v~~~Pdi~~~~l~~~~~fLILaSDGlwd~ls~~ei~~iv~~~~ 360 (365)
+..+.+.++|++|+..+|+.+..+|++...++...+++||||||||||+|+++|+.+++.+..
T Consensus 163 -~~~~~~~lt~~~g~~~~~~~i~~~p~~~~~~~~~~~d~ill~SDGv~~~l~~~~i~~~~~~~~ 225 (255)
T smart00332 163 -RVNGVLALSRAIGDFFLKPYVSAEPDVTVVELTEKDDFLILASDGLWDVLSNQEVVDIVRKHL 225 (255)
T ss_pred -eECCeEecccccCCHhhcCCeEeeeEEEEEEecCCCcEEEEECCccccCCCHHHHHHHHHHHh
Confidence 677788999999999999999999999999973348899999999999999999999998754
No 11
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=100.00 E-value=1.5e-32 Score=285.04 Aligned_cols=191 Identities=25% Similarity=0.332 Sum_probs=147.3
Q ss_pred EEEEeecCC-CCCCCceEEEecccC------C--CCceeEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcCh-hHHHHH
Q 017866 144 YSVYCKRGR-REAMEDRFSALVDFQ------G--HSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDI-EDQIED 213 (365)
Q Consensus 144 ~~~~s~~G~-R~~nEDa~~v~~~~~------~--~~~~~lf~V~DGhGG~~~a~~as~~l~~~l~~~~~~~~~-~~~i~~ 213 (365)
++..|++|. |..|||++.+..+.. + .....+|+|||||||+.+|++|++.+++.|.+.+..... .....+
T Consensus 377 ~a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~GevAS~lAv~~L~~~~~~~~~~~~~~~~ 456 (645)
T PRK14559 377 DAGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAAGEVASALAVETLQQYFQQHWQDELPDEE 456 (645)
T ss_pred EEEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchhHHHHHHHHHHHHHHHHHhhhcccccHHH
Confidence 788999996 999999987754321 1 013569999999999999999999999998876653211 112356
Q ss_pred HHHHHHHhcchhhhhh--------ccCCCceeEEEEEECCeEEEEEecccceEEE-cCCceEEcCCCCCCCCHHHHHHHH
Q 017866 214 AVKRGYLNTDSEFLKE--------DVYGGSCCVTALIQNGTLVVSNAGDCRAVMS-RGGLAEALTSDHRPSREDEKSRIE 284 (365)
Q Consensus 214 al~~a~~~~d~~l~~~--------~~~~GtT~v~ali~~~~l~vAnvGDSRa~l~-r~g~~~~LT~DHt~~~~~E~~ri~ 284 (365)
.|+++|..+|+.+.+. ...||||+++++|.++++|++||||||+|++ |+|++++||+||++.+++.++++.
T Consensus 457 ~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv~alI~~~~l~ianVGDSRaYli~r~g~l~QLT~DHs~~~~lv~~Gi~ 536 (645)
T PRK14559 457 TIREAIYLANEAIYDLNQQNARSGSGRMGTTLVMALVQDTQVAVAHVGDSRLYRVTRKGGLEQLTVDHEVGQREIQRGVE 536 (645)
T ss_pred HHHHHHHHHHHHHHHHhhhcccccCCCCCceeeeEEEECCEEEEEEecCceEEEEecCCeEEEeCCCCCHHHHHHHhCCC
Confidence 7888888888888652 2268999999999999999999999999987 578999999999997665544421
Q ss_pred HcCCeeeccCCceeecCCcchhhcccccccCCceeeeeEEEEEEecCCCeEEEEEcCccCCC
Q 017866 285 TMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDK 346 (365)
Q Consensus 285 ~~gg~v~~~~g~~rv~g~l~vtRalGd~~~k~~v~~~Pdi~~~~l~~~~~fLILaSDGlwd~ 346 (365)
... .+...+.+.++|+||+...+. .+|++..+++++ +++||||||||||+
T Consensus 537 ~~~--------a~~~p~~~~LTrALG~~~~~~---l~Pdi~~~~L~~-gD~lLLCSDGL~D~ 586 (645)
T PRK14559 537 PQI--------AYARPDAYQLTQALGPRDNSA---IQPDIQFLEIEE-DTLLLLCSDGLSDN 586 (645)
T ss_pred HHH--------HhcCcccceeeeccCCCCCCc---ccceEEEEEcCC-CCEEEEECCCCCCC
Confidence 110 011245679999999976542 589999999987 78899999999994
No 12
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-28 Score=230.68 Aligned_cols=190 Identities=31% Similarity=0.564 Sum_probs=155.9
Q ss_pred CceeEEEEEcCCCCchHHHHHHHHHHHHHHHHHHh---c----C------------------------------hhHHHH
Q 017866 170 SKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLR---R----D------------------------------IEDQIE 212 (365)
Q Consensus 170 ~~~~lf~V~DGhGG~~~a~~as~~l~~~l~~~~~~---~----~------------------------------~~~~i~ 212 (365)
.+.++|.+||||.|..+|-.|++.+.+.+.+.+.. . + .+.-+.
T Consensus 142 ~~~~~~slfdghags~~avvAsrll~~hI~~ql~~vvd~i~~~~~~~~~~~g~~~~~s~~s~~~~~~~~ek~Ir~E~LVi 221 (493)
T KOG1323|consen 142 ADGALFSLFDGHAGSAVAVVASRLLHRHIKEQLCEVVDTILHMDRHENLNFGKHRSESSYSMSEMSREDEKRIRHEHLVI 221 (493)
T ss_pred CcceeeeeecCCCcchHHHHHHHHHHHhhhHHHHHHHHHHhhhccccccccccccccCCcccccccchhhccCchHHhhH
Confidence 35789999999999999999999999888776541 0 0 023467
Q ss_pred HHHHHHHHhcchhhhhh----ccCCCceeEEEEEECCeEEEEEecccceEEEcCCceEEcCCCCCCCCHHHHHHHHHcC-
Q 017866 213 DAVKRGYLNTDSEFLKE----DVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMG- 287 (365)
Q Consensus 213 ~al~~a~~~~d~~l~~~----~~~~GtT~v~ali~~~~l~vAnvGDSRa~l~r~g~~~~LT~DHt~~~~~E~~ri~~~g- 287 (365)
.+|+.||+.+|+++.++ ...+|||+++++..-++||+||+||||++|.|+++++.|+.+.+| +.||+|++..+
T Consensus 222 GAlEsAFqemDeqiarer~~~~~~GGCtalvvi~llGKlYvaNAGDsRAIlVrndeirplS~efTP--etERqRlQ~Laf 299 (493)
T KOG1323|consen 222 GALESAFQEMDEQIARERQVWRLPGGCTALVVIVLLGKLYVANAGDSRAILVRNDEIRPLSKEFTP--ETERQRLQELAF 299 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCceEEEeeeeccceEEccCCCceEEEEecCCeeecccccCc--HHHHHHHHHHhh
Confidence 89999999999998875 346899999999999999999999999999999999999999998 67888887764
Q ss_pred -------Ce---------------------eeccCCce----------------------eecCCcchhhcccccccC--
Q 017866 288 -------GY---------------------VDLCHGTW----------------------RVQGSLAVSRALGDRHLK-- 315 (365)
Q Consensus 288 -------g~---------------------v~~~~g~~----------------------rv~g~l~vtRalGd~~~k-- 315 (365)
+. .+.+...| |+.+.+.++|.|||.++|
T Consensus 300 ~~PeLlgneFtrLEfprRl~~~dLgqrvLyRD~~MtGWayKtve~~DLr~pLI~gegrkaRll~TigVsRGlGDH~Lkv~ 379 (493)
T KOG1323|consen 300 RNPELLGNEFTRLEFPRRLTIKDLGQRVLYRDWNMTGWAYKTVEEEDLRFPLISGEGRKARLLATIGVSRGLGDHHLKVV 379 (493)
T ss_pred cChHhhcccccceecccccChhhhcceeeeeccccccceeehhhhhcCCcceecccchhhhhhhhheeccccCcceeeee
Confidence 10 11111111 455788999999998875
Q ss_pred -------CceeeeeEEEEEEecC----CCeEEEEEcCccCCCCChHHHHHHHHhhhc
Q 017866 316 -------QWIIAEPETKIIRIKP----EYEFLILASDGLWDKVLSWKPFLSVNYFAC 361 (365)
Q Consensus 316 -------~~v~~~Pdi~~~~l~~----~~~fLILaSDGlwd~ls~~ei~~iv~~~~~ 361 (365)
+++.+.|+|++++|.. .|+.||||||||||+++|+|+..+|+.++-
T Consensus 380 dsnl~iKPFLssvPeV~V~dl~q~e~~~DdVvilatDGLWDVlSneeva~~Vrs~L~ 436 (493)
T KOG1323|consen 380 DSNLSIKPFLSSVPEVRVYDLRQYEHLTDDVVILATDGLWDVLSNEEVALIVRSFLP 436 (493)
T ss_pred cCCcccchhhhcCCeeEEEehhhhccCCCcEEEEecCchhhhcccHHHHHHHHHhcC
Confidence 6788999999998863 278999999999999999999999999874
No 13
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.87 E-value=8.7e-22 Score=179.45 Aligned_cols=181 Identities=22% Similarity=0.261 Sum_probs=106.8
Q ss_pred EeecCCCCCCCceEEEecccCCCCceeEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChhHH---HHHHHHHHHHhcc
Q 017866 147 YCKRGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQ---IEDAVKRGYLNTD 223 (365)
Q Consensus 147 ~s~~G~R~~nEDa~~v~~~~~~~~~~~lf~V~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~---i~~al~~a~~~~d 223 (365)
.+++|++..|||++.+... .+..+++|+||+||...++.+++.+++.+.+.+........ ..+.++.+..++.
T Consensus 3 ~sh~~~~~~nqD~~~~~~~----~~~~~~aVaDG~g~~~~~~~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 78 (212)
T PF13672_consen 3 RSHRGRGAPNQDAFGIRTD----DDGNLAAVADGVGGSPYGEEAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEIL 78 (212)
T ss_dssp ----TTSSS--EEEEEE-T----CCTCEEEEEEEESTTTHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCEEeeeC----CCCEEEEEEECCCCCchhHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH
Confidence 4678999999999996654 33467799999999999999999999999988875543211 2223333332332
Q ss_pred hhh---------hhhccCCCceeEEEEEECCeEEEEEecccceEE-EcCCceEEcCCCCCCCCHHHHHHHHHcCCeeecc
Q 017866 224 SEF---------LKEDVYGGSCCVTALIQNGTLVVSNAGDCRAVM-SRGGLAEALTSDHRPSREDEKSRIETMGGYVDLC 293 (365)
Q Consensus 224 ~~l---------~~~~~~~GtT~v~ali~~~~l~vAnvGDSRa~l-~r~g~~~~LT~DHt~~~~~E~~ri~~~gg~v~~~ 293 (365)
..+ ......++||++++++.++.++++|+||||+|+ .++|++..++.||+. +..+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~tTl~~~v~~~~~~~~~~iGD~~i~~~~~~g~~~~l~~~~~~----~~~~----------- 143 (212)
T PF13672_consen 79 SIVRAFQSAKQADLELRDYGTTLLALVIDPDKVYIFNIGDSRIYVIRRNGEIQQLTDDHSG----EYPN----------- 143 (212)
T ss_dssp HHH----HHHHHSGGGTT-EE-EEEEEEETTEEEEEEESS-EEEEEEETTEEEE-S---BH----HHHH-----------
T ss_pred HHhhhhhhhhhccccccccCceEEEEEEECCEEEEEEECCCeEEEEECCCEEEEcCCCccc----hhhh-----------
Confidence 111 122346799999999999999999999999965 689999999999972 1111
Q ss_pred CCceeecCCcchhhcccccccCCceeeeeEEEEEEecCCCeEEEEEcCccCCCCChHH-HHHHHHhhhcc
Q 017866 294 HGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVLSWK-PFLSVNYFACF 362 (365)
Q Consensus 294 ~g~~rv~g~l~vtRalGd~~~k~~v~~~Pdi~~~~l~~~~~fLILaSDGlwd~ls~~e-i~~iv~~~~~~ 362 (365)
.++.+...... ...++..+++.+ ++.|+|||||||+.+.++| +..+++.+.+.
T Consensus 144 -----------~~~~~~~~~~~----~~~~~~~~~~~~-~d~ilL~SDG~~~~l~~~~~~~~~l~~~~~~ 197 (212)
T PF13672_consen 144 -----------QTRSLTGDDPE----PDVQYGSIPLEE-GDVILLCSDGVWDNLRSYEDLEQFLKDLWNS 197 (212)
T ss_dssp -----------CTTSCCHHCCC----TETEEEEEE--T-T-EEEEE-HHHHTTS-HHHHHHHH-------
T ss_pred -----------hhhccCccccc----cCCeEEEEEcCC-CCEEEEECcCccccCCCHHHHHHHhhhcccc
Confidence 12222222111 133666677777 6777799999999998655 77777766543
No 14
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=99.83 E-value=3.6e-20 Score=173.80 Aligned_cols=176 Identities=20% Similarity=0.291 Sum_probs=122.9
Q ss_pred CCCCceEEEecccCCCCceeEEEEEcCCCCchH-----HHHHHHHHHHHHHHHHHhcC-hhHHHHHHHHHHHHhcchhhh
Q 017866 154 EAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKA-----AEFAAENLDKNILEEVLRRD-IEDQIEDAVKRGYLNTDSEFL 227 (365)
Q Consensus 154 ~~nEDa~~v~~~~~~~~~~~lf~V~DGhGG~~~-----a~~as~~l~~~l~~~~~~~~-~~~~i~~al~~a~~~~d~~l~ 227 (365)
..-||+|++..+ .+..+.|||||+|||.- +.|. +.|+.+..+.....+ ...++...|.++|.++.++
T Consensus 89 ~~GEDa~Fvss~----~~~~v~GVADGVGGWa~~GiDpg~fS-~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~l~~~-- 161 (330)
T KOG1379|consen 89 KGGEDAWFVSSN----PHAIVMGVADGVGGWAEYGIDPGAFS-RELMSNCERLVQNSDFNPSDPVNLLEKAYAELKSQ-- 161 (330)
T ss_pred CCCCcceeeccC----cccceEEEccccchHhhcCcCHHHHH-HHHHHHHHHHhcccccCCCChHHHHHHHHHHHhhc--
Confidence 345899999876 34579999999998854 3333 334444444443322 1346888899988877544
Q ss_pred hhccCCCceeEEEEEE--CCeEEEEEecccceEEEcCCceEEcCCCCCCCCHHHHHHHHHcCCeeeccCCceee--cCCc
Q 017866 228 KEDVYGGSCCVTALIQ--NGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRV--QGSL 303 (365)
Q Consensus 228 ~~~~~~GtT~v~ali~--~~~l~vAnvGDSRa~l~r~g~~~~LT~DHt~~~~~E~~ri~~~gg~v~~~~g~~rv--~g~l 303 (365)
+...-+++|++++++. +++||+||+|||...++|+|+++.-|..+...-. -.+.+ .+.
T Consensus 162 ~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H~FN-----------------~PyQLs~~p~- 223 (330)
T KOG1379|consen 162 KVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQHYFN-----------------TPYQLSSPPE- 223 (330)
T ss_pred CCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEEEEcCchheeccC-----------------CceeeccCCc-
Confidence 3334577888888887 8899999999999999999999999887664210 00000 000
Q ss_pred chhhcccccccCCceeeeeEEEEEEecCCCeEEEEEcCccCCCCChHHHHHHHHhhhc
Q 017866 304 AVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVLSWKPFLSVNYFAC 361 (365)
Q Consensus 304 ~vtRalGd~~~k~~v~~~Pdi~~~~l~~~~~fLILaSDGlwd~ls~~ei~~iv~~~~~ 361 (365)
.....++|.. -..++..+++++ +|.||||||||||+|.++||+++|.....
T Consensus 224 ~~~~~~~d~p------~~ad~~~~~v~~-GDvIilATDGlfDNl~e~~Il~il~~~~~ 274 (330)
T KOG1379|consen 224 GYSSYISDVP------DSADVTSFDVQK-GDVIILATDGLFDNLPEKEILSILKGLDA 274 (330)
T ss_pred cccccccCCc------cccceEEEeccC-CCEEEEecccccccccHHHHHHHHHHhhc
Confidence 0022234433 246788899998 78999999999999999999999987654
No 15
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.82 E-value=3.2e-20 Score=193.77 Aligned_cols=217 Identities=23% Similarity=0.318 Sum_probs=189.5
Q ss_pred ccCceEEEEeecCCCCCCCceEEEecccCCCCceeEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHH
Q 017866 139 ERDGFYSVYCKRGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRG 218 (365)
Q Consensus 139 ~~~~~~~~~s~~G~R~~nEDa~~v~~~~~~~~~~~lf~V~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~i~~al~~a 218 (365)
..+. ||++...|.|..+.-+...+.++.+ ...+.||++||-+......+....+.+++.+++..... -.+.|+.+
T Consensus 520 ~~~t-~Gv~~~~gqrnk~c~~~~~v~nf~~-~~~a~~g~~dgs~n~~v~~~vq~~ma~~L~eev~~~~~---et~~mr~~ 594 (1081)
T KOG0618|consen 520 FLWT-YGVAGVSGQRNKVCSRAVWVENFFL-NPQATFGCFDGSRNSRVLSLVQDTMASYLAEEVQLYGN---ETEQMRNT 594 (1081)
T ss_pred ehee-eccchhcccccchhhhhhhhhhccc-CCcceEEEEcCCCchhHHHHHHHHHHHHHHHHHHhccC---hHHHHHHH
Confidence 3344 8999999999998888777777655 45689999999999999999999999999999886652 23339999
Q ss_pred HHhcchhhhhhccCCCceeEEEEEECC--------eEEEEEecccceEEEcCCceEEcCCCCC-CCCHHHHHHHHHcCCe
Q 017866 219 YLNTDSEFLKEDVYGGSCCVTALIQNG--------TLVVSNAGDCRAVMSRGGLAEALTSDHR-PSREDEKSRIETMGGY 289 (365)
Q Consensus 219 ~~~~d~~l~~~~~~~GtT~v~ali~~~--------~l~vAnvGDSRa~l~r~g~~~~LT~DHt-~~~~~E~~ri~~~gg~ 289 (365)
|+.+++++...+..-|..++++.|..+ ++++||+|+|.++++++|+..++|+-.. ..+++|.+||...+|+
T Consensus 595 fl~~~rklg~~g~~lg~~~~~~~i~~d~~~~asS~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v~~eE~~RI~~~~g~ 674 (1081)
T KOG0618|consen 595 FLRLNRKLGEEGQVLGGSVVLCQIVEDSLSPASSKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEVDREEYKRIVDSKGF 674 (1081)
T ss_pred HHHHhhhhhhhhccccchhhheeecccccCcccchhhhHhhhccchhhhhhcCCcCcccccccccCCHHHHHHHHHhcCe
Confidence 999999998888878888888887754 5999999999999999999999887764 4489999999999999
Q ss_pred eeccCCceeecCCcchhhcccccccCCceeeeeEEEEEEecCCCeEEEEEcCccCCCCChHHHHHHHHhhhccC
Q 017866 290 VDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVLSWKPFLSVNYFACFL 363 (365)
Q Consensus 290 v~~~~g~~rv~g~l~vtRalGd~~~k~~v~~~Pdi~~~~l~~~~~fLILaSDGlwd~ls~~ei~~iv~~~~~~l 363 (365)
|..+ .+++|....||++|.+.+.++|.+.|+|..+.|.+.|+||||++-+||++|+-++++++||+.-+.|
T Consensus 675 i~ed---~k~ngvt~~tR~iG~~~l~P~v~p~Phv~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~~dpL 745 (1081)
T KOG0618|consen 675 ITED---NKLNGVTSSTRAIGPFSLFPHVLPDPHVSVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNVEDPL 745 (1081)
T ss_pred ecCC---CeeeceeeeeeecccccccccccCCCceeeEecccCceEEEEcchHHhhhccHHHHHHHHhcCCchH
Confidence 9853 3899999999999999999999999999999999999999999999999999999999999766654
No 16
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.75 E-value=3.5e-17 Score=146.89 Aligned_cols=159 Identities=17% Similarity=0.107 Sum_probs=118.5
Q ss_pred CCCCCceEEEecccCCCCceeEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHhcchhhhhh-cc
Q 017866 153 REAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYLNTDSEFLKE-DV 231 (365)
Q Consensus 153 R~~nEDa~~v~~~~~~~~~~~lf~V~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~i~~al~~a~~~~d~~l~~~-~~ 231 (365)
....-|.|.+.... ++..+|+|+||||+...|.+++..+...+.+.+.... . +...+.++|+.+... ..
T Consensus 14 ~~~~GD~~~~~~~~---~~~~~~~v~Dg~G~G~~aa~~s~~~~~~~~~~~~~~~---~----~~~~l~~~n~~l~~~~~~ 83 (193)
T smart00331 14 TQVGGDFYDVVKLP---EGRLLIAIADVMGKGLAAALAMSMARSALRTLLSEGI---S----LSQILERLNRAIYENGED 83 (193)
T ss_pred HhcCccEEEEEEeC---CCeEEEEEEecCCCChHHHHHHHHHHHHHHHHhhcCC---C----HHHHHHHHHHHHHhcCCC
Confidence 46677888776652 3368999999999999999999988888877655422 2 333444455555554 45
Q ss_pred CCCceeEEEEE--ECCeEEEEEecccceEEEc-CCceEEcCCCCCCCCHHHHHHHHHcCCeeeccCCceeecCCcchhhc
Q 017866 232 YGGSCCVTALI--QNGTLVVSNAGDCRAVMSR-GGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRA 308 (365)
Q Consensus 232 ~~GtT~v~ali--~~~~l~vAnvGDSRa~l~r-~g~~~~LT~DHt~~~~~E~~ri~~~gg~v~~~~g~~rv~g~l~vtRa 308 (365)
.+|+|++++++ ..++++++|+||+|+|+++ ++..++++.+. ++.
T Consensus 84 ~~~~T~~~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~---------------------------------~~~ 130 (193)
T smart00331 84 GMFATLFLALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDL---------------------------------GAP 130 (193)
T ss_pred CcEEEEEEEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCC---------------------------------Cce
Confidence 67999999988 5778999999999999998 66666666542 234
Q ss_pred ccccccCCceeeeeEEEEEEecCCCeEEEEEcCccCCCCChHHHHHHHHhhh
Q 017866 309 LGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVLSWKPFLSVNYFA 360 (365)
Q Consensus 309 lGd~~~k~~v~~~Pdi~~~~l~~~~~fLILaSDGlwd~ls~~ei~~iv~~~~ 360 (365)
+|.... .++++..+.+.+ ++.|+|+||||||.+..+++.++|++..
T Consensus 131 lG~~~~-----~~~~~~~~~l~~-gd~l~l~TDGl~e~~~~~~l~~~l~~~~ 176 (193)
T smart00331 131 LGLEPD-----VEVDVRELTLEP-GDLLLLYTDGLTEARNPERLEELLEELL 176 (193)
T ss_pred eeeCCC-----CcceeEEEeeCC-CCEEEEECCCccccCChHHHHHHHHHhc
Confidence 454331 246777888988 6788899999999999999999998764
No 17
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.29 E-value=1e-10 Score=125.70 Aligned_cols=158 Identities=15% Similarity=0.097 Sum_probs=108.7
Q ss_pred CCCCCCCceEEEecccCCCCceeEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHhcchhhhhh-
Q 017866 151 GRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYLNTDSEFLKE- 229 (365)
Q Consensus 151 G~R~~nEDa~~v~~~~~~~~~~~lf~V~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~i~~al~~a~~~~d~~l~~~- 229 (365)
+.+..+.|.|.+.... ++..+++|+||+|+...|..++..+.+.+.+.+...... . .++..+|..+...
T Consensus 562 ~g~~vsGD~y~~~~l~---~g~~~~~laDGmGhG~~Aa~~S~~~~~ll~~~~~~g~~~---~----~ai~~lN~~L~~~~ 631 (764)
T TIGR02865 562 DGELVSGDSYSFGKLS---AGKYAVAISDGMGSGPEAAQESSACVRLLEKFLESGFDR---E----VAIKTVNSILSLRS 631 (764)
T ss_pred CCCcccCceEEEEEEC---CCEEEEEEEcccCCCHHHHHHHHHHHHHHHHHHHcCCCH---H----HHHHHHHHHHHhCC
Confidence 3467899999876642 335789999999977777777877777666555433312 2 2333344333222
Q ss_pred ccCCCceeEEEEEE--CCeEEEEEecccceEEEcCCceEEcCCCCCCCCHHHHHHHHHcCCeeeccCCceeecCCcchhh
Q 017866 230 DVYGGSCCVTALIQ--NGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSR 307 (365)
Q Consensus 230 ~~~~GtT~v~ali~--~~~l~vAnvGDSRa~l~r~g~~~~LT~DHt~~~~~E~~ri~~~gg~v~~~~g~~rv~g~l~vtR 307 (365)
...+.+|+.+++++ .+++.++|+|+++.|+.|+++++.++..+-|
T Consensus 632 ~~~~faTl~l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~~lP--------------------------------- 678 (764)
T TIGR02865 632 TDEKFSTLDLSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSSNLP--------------------------------- 678 (764)
T ss_pred CCCeEEEEEEEEEECCCCeEEEEecCCCceEEEECCEEEEecCCCce---------------------------------
Confidence 23468999998886 6789999999999999999999888754433
Q ss_pred cccccccCCceeeeeEEEEEEecCCCeEEEEEcCccCCCCChHH-----HHHHHHh
Q 017866 308 ALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVLSWK-----PFLSVNY 358 (365)
Q Consensus 308 alGd~~~k~~v~~~Pdi~~~~l~~~~~fLILaSDGlwd~ls~~e-----i~~iv~~ 358 (365)
+|-.. ..+++....++.+ +|+|||+||||||..++++ +.++++.
T Consensus 679 -lGil~-----~~~~~~~~~~L~~-GD~Lll~SDGv~E~~~~~~~~~~~l~~~l~~ 727 (764)
T TIGR02865 679 -IGILD-----EVDVELVRKKLKN-GDLIVMVSDGVLEGEKEVEGKVLWLVRKLKE 727 (764)
T ss_pred -eEecc-----CCccceEEEEeCC-CCEEEEECCCCCcCCcccccHHHHHHHHHHh
Confidence 12111 1356677788988 7888899999999887543 5555543
No 18
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=98.97 E-value=3.5e-08 Score=88.12 Aligned_cols=134 Identities=22% Similarity=0.241 Sum_probs=85.3
Q ss_pred CceeEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHhcchhhhhh-cc-CCCceeEEEEEE--CC
Q 017866 170 SKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYLNTDSEFLKE-DV-YGGSCCVTALIQ--NG 245 (365)
Q Consensus 170 ~~~~lf~V~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~i~~al~~a~~~~d~~l~~~-~~-~~GtT~v~ali~--~~ 245 (365)
++..++.|+|++|....|.+.+..+...+........ .+.+.++ .+|+.+... .. ...+|+++++++ .+
T Consensus 2 ~~~~~~~v~D~~GhG~~aa~~~~~~~~~~~~~~~~~~---~p~~~l~----~ln~~l~~~~~~~~~~~t~~~~~~d~~~~ 74 (193)
T PF07228_consen 2 DGRYFIIVGDVSGHGVSAALLSAALASAIRELLDEGL---DPEELLE----ALNRRLYRDLKGDNRYATACYAIIDPETG 74 (193)
T ss_dssp TTEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTT---SHHHHHH----HHHHHHHHHTTTTSTTEEEEEEEEETTTT
T ss_pred CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHcCC---CHHHHHH----HHHHHHHHHhhhccccceEEEEEecccce
Confidence 3467899999999666666666666666666654433 2333333 344444222 22 367888888876 45
Q ss_pred eEEEEEecccceEEEcC--CceEEcCCCCCCCCHHHHHHHHHcCCeeeccCCceeecCCcchhhcccccccCCceeeeeE
Q 017866 246 TLVVSNAGDCRAVMSRG--GLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPE 323 (365)
Q Consensus 246 ~l~vAnvGDSRa~l~r~--g~~~~LT~DHt~~~~~E~~ri~~~gg~v~~~~g~~rv~g~l~vtRalGd~~~k~~v~~~Pd 323 (365)
+++++|+|+++++++|+ +....+.....+ +|...- .+..
T Consensus 75 ~l~~~~aG~~~~l~~~~~~~~~~~~~~~~~~----------------------------------lG~~~~-----~~~~ 115 (193)
T PF07228_consen 75 TLTYANAGHPPPLLLRPGGREIEQLESEGPP----------------------------------LGIFED-----IDYQ 115 (193)
T ss_dssp EEEEEEESSSEEEEEETTCTEEEEETCSSBB----------------------------------CSSSCT-----TCEE
T ss_pred EEEEeCCCCCCEEEEeccccceeecccCccc----------------------------------eeeecc-----cccc
Confidence 69999999999999998 344444332221 232211 2455
Q ss_pred EEEEEecCCCeEEEEEcCccCCCCChH
Q 017866 324 TKIIRIKPEYEFLILASDGLWDKVLSW 350 (365)
Q Consensus 324 i~~~~l~~~~~fLILaSDGlwd~ls~~ 350 (365)
...+.+.+ ++.|+|+||||+|....+
T Consensus 116 ~~~~~l~~-gd~l~l~TDGl~e~~~~~ 141 (193)
T PF07228_consen 116 EQEIQLEP-GDRLLLYTDGLFEALNED 141 (193)
T ss_dssp EEEEE--T-TEEEEEECHHHCTTTCHH
T ss_pred ceEEEecc-ccEEEEeCCChhhccCCc
Confidence 66788888 788999999999998544
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=97.05 E-value=0.021 Score=56.64 Aligned_cols=154 Identities=20% Similarity=0.147 Sum_probs=91.9
Q ss_pred CCCceEEEecccCCCCceeEEEEEcCCC-CchHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHhcchhhhhhcc-C
Q 017866 155 AMEDRFSALVDFQGHSKQAVFGIFDGHG-GAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYLNTDSEFLKEDV-Y 232 (365)
Q Consensus 155 ~nEDa~~v~~~~~~~~~~~lf~V~DGhG-G~~~a~~as~~l~~~l~~~~~~~~~~~~i~~al~~a~~~~d~~l~~~~~-~ 232 (365)
..=|.|-+... +.....++|.|.+| |-.++-. ..+.....+.+.... .-.+.+.|++ +|+-+.+... .
T Consensus 161 vGGD~yd~~~~---~~~~~~i~I~DvsG~Gv~aal~--m~~~~~~~~~~~~~~-~~~p~~~l~~----~n~~~~~~~~~~ 230 (367)
T COG2208 161 VGGDYYDFIQL---GEKRLRIGIGDVSGKGVPAALL--MLMPKLALRLLLESG-PLDPADVLET----LNRVLKQNLEED 230 (367)
T ss_pred cCCceEEEEEE---CCcEEEEEEEeccCCCHHHHHH--HHHHHHHHHHhhhcc-cCCHHHHHHH----HHHHHHhcccCC
Confidence 44566655544 12467889999999 6655555 334444444444331 1123333322 2222222211 2
Q ss_pred CCceeEEEEEE--CCeEEEEEecccceEEEcCCc---eEEcCCCCCCCCHHHHHHHHHcCCeeeccCCceeecCCcchhh
Q 017866 233 GGSCCVTALIQ--NGTLVVSNAGDCRAVMSRGGL---AEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSR 307 (365)
Q Consensus 233 ~GtT~v~ali~--~~~l~vAnvGDSRa~l~r~g~---~~~LT~DHt~~~~~E~~ri~~~gg~v~~~~g~~rv~g~l~vtR 307 (365)
+=+|+..++++ .+.+.++|+|---+++++.+. ...|. ....
T Consensus 231 ~f~T~~~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~----------------------------------~~g~ 276 (367)
T COG2208 231 MFVTLFLGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLT----------------------------------ALGL 276 (367)
T ss_pred cEEEEEEEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEcc----------------------------------CCCc
Confidence 55677766665 567999999999988888643 23332 2233
Q ss_pred cccccccCCceeeeeEEEEEEecCCCeEEEEEcCccCC-------CCChHHHHHHHHh
Q 017866 308 ALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWD-------KVLSWKPFLSVNY 358 (365)
Q Consensus 308 alGd~~~k~~v~~~Pdi~~~~l~~~~~fLILaSDGlwd-------~ls~~ei~~iv~~ 358 (365)
.+|... .....+....+.+ +|.|||.|||+.| .+..+...+++.+
T Consensus 277 piG~~~-----~~~~~~~~~~l~~-gd~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~ 328 (367)
T COG2208 277 PIGLLP-----DYQYEVASLQLEP-GDLLVLYTDGVTEARNSDGEFFGLERLLKILGR 328 (367)
T ss_pred eeeecC-----CccchheeEEecC-CCEEEEEcCCeeeeecCCccEecHHHHHHHHHH
Confidence 445443 1356677788888 8899999999999 6666667776664
No 20
>KOG0260 consensus RNA polymerase II, large subunit [Transcription]
Probab=82.51 E-value=7.7 Score=43.70 Aligned_cols=7 Identities=57% Similarity=1.151 Sum_probs=2.8
Q ss_pred CCCCcCC
Q 017866 9 NSPVFSP 15 (365)
Q Consensus 9 ~~~~~~~ 15 (365)
.||.+||
T Consensus 1483 tspsysp 1489 (1605)
T KOG0260|consen 1483 TSPSYSP 1489 (1605)
T ss_pred CCCCCCC
Confidence 3444443
No 21
>KOG0260 consensus RNA polymerase II, large subunit [Transcription]
Probab=76.19 E-value=16 Score=41.31 Aligned_cols=7 Identities=57% Similarity=1.198 Sum_probs=2.8
Q ss_pred CCCcCCC
Q 017866 10 SPVFSPS 16 (365)
Q Consensus 10 ~~~~~~~ 16 (365)
||.++|.
T Consensus 1463 sp~ys~t 1469 (1605)
T KOG0260|consen 1463 SPSYSPT 1469 (1605)
T ss_pred CCccCCC
Confidence 3444433
No 22
>PRK10693 response regulator of RpoS; Provisional
Probab=46.64 E-value=1.6e+02 Score=28.16 Aligned_cols=47 Identities=9% Similarity=0.067 Sum_probs=30.1
Q ss_pred HHhcchhhhhhccCCCceeEEEEEEC--CeEEEEEecccceEEEcCCce
Q 017866 219 YLNTDSEFLKEDVYGGSCCVTALIQN--GTLVVSNAGDCRAVMSRGGLA 265 (365)
Q Consensus 219 ~~~~d~~l~~~~~~~GtT~v~ali~~--~~l~vAnvGDSRa~l~r~g~~ 265 (365)
+..+|+.+.+.....--|++.++++. ++|.++|.|-...++..+++.
T Consensus 211 l~~lN~~l~~~~~~~~~t~~~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 211 LKQVNHLLRQANLPGQFPLLVGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred HHHHHHHHHhcCCCceeeEEEEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 33455555444332235777777764 469999999999886545544
No 23
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=38.65 E-value=18 Score=27.36 Aligned_cols=22 Identities=23% Similarity=0.250 Sum_probs=16.2
Q ss_pred ecCCCeEEEEEcCccCCCCChH
Q 017866 329 IKPEYEFLILASDGLWDKVLSW 350 (365)
Q Consensus 329 l~~~~~fLILaSDGlwd~ls~~ 350 (365)
++..++.+|+++||+|=-+...
T Consensus 23 l~~~G~Rllva~nGv~lEv~r~ 44 (72)
T PF09436_consen 23 LERPGHRLLVASNGVFLEVRRP 44 (72)
T ss_pred cccCCcEEEEecCcEEEEEech
Confidence 3434788889999999766544
No 24
>PRK05457 heat shock protein HtpX; Provisional
Probab=33.21 E-value=1.1e+02 Score=29.28 Aligned_cols=34 Identities=12% Similarity=-0.021 Sum_probs=25.2
Q ss_pred eEEEEEEecCCCeEEEEEcCccCCCCChHHHHHHH
Q 017866 322 PETKIIRIKPEYEFLILASDGLWDKVLSWKPFLSV 356 (365)
Q Consensus 322 Pdi~~~~l~~~~~fLILaSDGlwd~ls~~ei~~iv 356 (365)
|.-...-... ...+|+.|+|+++.++++|+..++
T Consensus 105 ~NAfa~G~~~-~~~~V~vt~gLl~~L~~~El~aVl 138 (284)
T PRK05457 105 INAFATGASK-NNSLVAVSTGLLQNMSRDEVEAVL 138 (284)
T ss_pred ceEEEecCCC-CCeEEEeehHHhhhCCHHHHHHHH
Confidence 3333333333 456779999999999999999887
No 25
>COG4004 Uncharacterized protein conserved in archaea [Function unknown]
Probab=27.87 E-value=2.4e+02 Score=22.43 Aligned_cols=43 Identities=23% Similarity=0.319 Sum_probs=32.0
Q ss_pred eeeeeEEEEEEecCCCeEEEEEcCccCCCCChHHHHHHHHhhhccC
Q 017866 318 IIAEPETKIIRIKPEYEFLILASDGLWDKVLSWKPFLSVNYFACFL 363 (365)
Q Consensus 318 v~~~Pdi~~~~l~~~~~fLILaSDGlwd~ls~~ei~~iv~~~~~~l 363 (365)
|..-|-+..+++.++..-|.+-| .|+-+++...++++.|++.|
T Consensus 36 vas~pgis~ieik~E~kkL~v~t---~~~~~d~~~l~~~ktyndfl 78 (96)
T COG4004 36 VASSPGISRIEIKPENKKLLVNT---TDYTDDETKLQTAKTYNDFL 78 (96)
T ss_pred EEecCCceEEEEecccceEEEec---ccccCchhHHHHHHHHHHHH
Confidence 45678888888888766665555 67888888888888777653
No 26
>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A.
Probab=26.67 E-value=57 Score=25.28 Aligned_cols=28 Identities=14% Similarity=0.008 Sum_probs=23.4
Q ss_pred EEEEcCccCCCCChHHHHHHHHhhhccC
Q 017866 336 LILASDGLWDKVLSWKPFLSVNYFACFL 363 (365)
Q Consensus 336 LILaSDGlwd~ls~~ei~~iv~~~~~~l 363 (365)
+|+|+-+.+.+++++++..+++++...|
T Consensus 70 ~v~~~~~~~~~~~~~~~~~ll~~~~~~l 97 (101)
T PF13649_consen 70 LVVCSGLSLHHLSPEELEALLRRIARLL 97 (101)
T ss_dssp EEEE-TTGGGGSSHHHHHHHHHHHHHTE
T ss_pred EEEEcCCccCCCCHHHHHHHHHHHHHHh
Confidence 6688888788999999999999988765
No 27
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=23.02 E-value=1.5e+02 Score=17.57 Aligned_cols=22 Identities=23% Similarity=0.441 Sum_probs=16.8
Q ss_pred EEEEECCeEEEEEecccceEEE
Q 017866 239 TALIQNGTLVVSNAGDCRAVMS 260 (365)
Q Consensus 239 ~ali~~~~l~vAnvGDSRa~l~ 260 (365)
+++-.++.+||+-.|..|+..+
T Consensus 7 vav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 7 VAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEETTSEEEEEECCCTEEEEE
T ss_pred EEEeCCCCEEEEECCCCEEEEC
Confidence 3444788999999998887653
No 28
>COG3315 O-Methyltransferase involved in polyketide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.81 E-value=1.9e+02 Score=27.89 Aligned_cols=95 Identities=16% Similarity=0.072 Sum_probs=55.7
Q ss_pred ccceEEEcCCc-eEEcCCCCCCCCHHHHHHHHHcCCeeeccCCceeecCCcchhhcccccccCCceeeeeEEEEEEecCC
Q 017866 254 DCRAVMSRGGL-AEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPE 332 (365)
Q Consensus 254 DSRa~l~r~g~-~~~LT~DHt~~~~~E~~ri~~~gg~v~~~~g~~rv~g~l~vtRalGd~~~k~~v~~~Pdi~~~~l~~~ 332 (365)
|+|+|.+..+. ....-.||....+.-++.+...++...... +. +.-.|=+. .|...-+ ..-++..
T Consensus 104 DTRayRl~~~~~~~vfEvD~Pevi~~K~~~l~e~~~~~~~~~---~~-----Va~Dl~~~---dw~~~L~---~~G~d~~ 169 (297)
T COG3315 104 DTRAYRLDWPKGTRVFEVDLPEVIEFKKKLLAERGATPPAHR---RL-----VAVDLRED---DWPQALA---AAGFDRS 169 (297)
T ss_pred ccceeecCCCCCCeEEECCCcHHHHHHHHHhhhcCCCCCceE---EE-----Eecccccc---chHHHHH---hcCCCcC
Confidence 99999999885 899999999887766777776665322100 00 00000000 0000000 0011122
Q ss_pred CeEEEEEcCccCCCCChHHHHHHHHhhhccC
Q 017866 333 YEFLILASDGLWDKVLSWKPFLSVNYFACFL 363 (365)
Q Consensus 333 ~~fLILaSDGlwd~ls~~ei~~iv~~~~~~l 363 (365)
.. .++-.-||.-+|+++++.+++..+...+
T Consensus 170 ~p-t~~iaEGLl~YL~~~~v~~ll~~I~~~~ 199 (297)
T COG3315 170 RP-TLWIAEGLLMYLPEEAVDRLLSRIAALS 199 (297)
T ss_pred CC-eEEEeccccccCCHHHHHHHHHHHHHhC
Confidence 22 3345589999999999999999887654
Done!