Query 017868
Match_columns 365
No_of_seqs 145 out of 1539
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 04:07:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017868.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017868hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0024 Sorbitol dehydrogenase 100.0 1.6E-63 3.4E-68 422.8 32.5 346 15-364 2-351 (354)
2 COG1064 AdhP Zn-dependent alco 100.0 8.3E-61 1.8E-65 419.5 33.0 331 15-365 1-337 (339)
3 PRK09880 L-idonate 5-dehydroge 100.0 1E-53 2.2E-58 392.0 37.5 338 15-365 2-343 (343)
4 COG1062 AdhC Zn-dependent alco 100.0 2.7E-53 5.9E-58 363.7 30.8 336 17-364 2-365 (366)
5 cd08239 THR_DH_like L-threonin 100.0 3.1E-51 6.6E-56 375.6 37.8 335 18-365 1-339 (339)
6 PLN02702 L-idonate 5-dehydroge 100.0 1.5E-50 3.3E-55 374.3 40.5 363 1-364 1-363 (364)
7 KOG0023 Alcohol dehydrogenase, 100.0 7.1E-51 1.5E-55 344.8 31.5 338 12-365 4-354 (360)
8 cd08281 liver_ADH_like1 Zinc-d 100.0 5.9E-50 1.3E-54 370.9 37.0 334 18-363 1-371 (371)
9 PLN02740 Alcohol dehydrogenase 100.0 7.3E-50 1.6E-54 371.2 36.9 343 14-365 7-381 (381)
10 PLN02827 Alcohol dehydrogenase 100.0 9.6E-50 2.1E-54 369.4 37.4 346 7-365 2-376 (378)
11 COG1063 Tdh Threonine dehydrog 100.0 1.7E-49 3.7E-54 362.1 35.8 337 18-365 1-350 (350)
12 KOG0022 Alcohol dehydrogenase, 100.0 1.2E-49 2.6E-54 335.6 30.9 342 14-365 4-375 (375)
13 TIGR03451 mycoS_dep_FDH mycoth 100.0 1E-48 2.2E-53 361.1 36.8 337 17-365 1-358 (358)
14 PRK10309 galactitol-1-phosphat 100.0 1.8E-48 3.8E-53 358.3 38.2 335 18-365 1-346 (347)
15 TIGR02819 fdhA_non_GSH formald 100.0 2.1E-48 4.5E-53 361.0 35.6 336 18-365 3-390 (393)
16 TIGR02818 adh_III_F_hyde S-(hy 100.0 5.3E-48 1.2E-52 357.1 37.7 337 18-365 2-368 (368)
17 cd08301 alcohol_DH_plants Plan 100.0 9E-48 1.9E-52 356.3 37.7 338 17-364 2-369 (369)
18 COG0604 Qor NADPH:quinone redu 100.0 4.1E-48 9E-53 348.3 33.9 310 18-365 1-326 (326)
19 PLN02586 probable cinnamyl alc 100.0 7.5E-48 1.6E-52 354.7 36.2 341 6-365 1-353 (360)
20 cd08300 alcohol_DH_class_III c 100.0 3E-47 6.5E-52 352.4 37.4 337 17-364 2-368 (368)
21 cd08233 butanediol_DH_like (2R 100.0 5.3E-47 1.1E-51 349.2 38.1 340 18-364 1-351 (351)
22 TIGR03201 dearomat_had 6-hydro 100.0 3.8E-47 8.1E-52 349.4 36.0 334 21-365 2-349 (349)
23 cd08230 glucose_DH Glucose deh 100.0 5.2E-47 1.1E-51 349.4 35.6 331 18-365 1-355 (355)
24 cd08277 liver_alcohol_DH_like 100.0 1E-46 2.2E-51 348.5 37.4 336 17-364 2-365 (365)
25 PLN02178 cinnamyl-alcohol dehy 100.0 1.7E-46 3.7E-51 346.6 35.9 327 20-365 9-348 (375)
26 TIGR02822 adh_fam_2 zinc-bindi 100.0 6.1E-46 1.3E-50 338.0 34.5 312 27-363 13-328 (329)
27 cd08237 ribitol-5-phosphate_DH 100.0 4.1E-46 8.9E-51 341.0 30.5 325 17-365 2-339 (341)
28 KOG1197 Predicted quinone oxid 100.0 7.2E-46 1.6E-50 303.5 25.8 310 13-364 4-329 (336)
29 PLN02514 cinnamyl-alcohol dehy 100.0 1.5E-44 3.2E-49 332.8 35.8 331 16-365 8-350 (357)
30 PRK10083 putative oxidoreducta 100.0 3.9E-44 8.5E-49 328.7 37.2 335 18-365 1-337 (339)
31 cd08231 MDR_TM0436_like Hypoth 100.0 5.4E-44 1.2E-48 330.4 38.0 338 19-365 2-361 (361)
32 TIGR01202 bchC 2-desacetyl-2-h 100.0 1E-44 2.2E-49 327.1 32.0 306 17-364 1-308 (308)
33 cd08238 sorbose_phosphate_red 100.0 2.1E-43 4.5E-48 330.8 36.7 330 17-365 2-368 (410)
34 cd08285 NADP_ADH NADP(H)-depen 100.0 4.8E-43 1E-47 322.8 37.3 338 18-365 1-351 (351)
35 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.5E-42 3.2E-47 319.4 37.8 339 18-363 1-350 (350)
36 cd05285 sorbitol_DH Sorbitol d 100.0 1.8E-42 3.8E-47 318.1 36.9 338 20-364 1-342 (343)
37 cd08299 alcohol_DH_class_I_II_ 100.0 3.7E-42 8E-47 318.6 38.1 339 16-365 6-373 (373)
38 cd08296 CAD_like Cinnamyl alco 100.0 3.3E-42 7.2E-47 314.9 36.9 329 18-364 1-333 (333)
39 cd08283 FDH_like_1 Glutathione 100.0 5.1E-42 1.1E-46 319.2 37.5 339 18-365 1-386 (386)
40 cd05284 arabinose_DH_like D-ar 100.0 1.2E-41 2.5E-46 312.4 36.4 335 18-365 1-340 (340)
41 PRK05396 tdh L-threonine 3-deh 100.0 1.9E-41 4.1E-46 311.0 36.5 337 18-365 1-340 (341)
42 cd05279 Zn_ADH1 Liver alcohol 100.0 2.4E-41 5.3E-46 312.6 36.9 334 19-364 2-365 (365)
43 cd08246 crotonyl_coA_red croto 100.0 1.6E-41 3.6E-46 317.1 35.5 342 14-364 9-392 (393)
44 cd08232 idonate-5-DH L-idonate 100.0 3.4E-41 7.4E-46 309.2 36.6 334 22-365 2-339 (339)
45 cd08284 FDH_like_2 Glutathione 100.0 5.5E-41 1.2E-45 308.5 36.7 334 18-364 1-343 (344)
46 cd05278 FDH_like Formaldehyde 100.0 4.3E-41 9.3E-46 309.6 36.0 338 18-365 1-347 (347)
47 cd08286 FDH_like_ADH2 formalde 100.0 9.2E-41 2E-45 307.1 37.4 338 18-365 1-345 (345)
48 cd08278 benzyl_alcohol_DH Benz 100.0 6.5E-41 1.4E-45 309.8 36.4 334 16-364 1-365 (365)
49 cd08242 MDR_like Medium chain 100.0 8.2E-41 1.8E-45 304.1 36.0 319 18-365 1-319 (319)
50 cd08262 Zn_ADH8 Alcohol dehydr 100.0 9.8E-41 2.1E-45 306.4 36.3 329 18-364 1-341 (341)
51 cd08265 Zn_ADH3 Alcohol dehydr 100.0 1.2E-40 2.7E-45 309.9 36.7 335 21-363 32-383 (384)
52 cd08235 iditol_2_DH_like L-idi 100.0 2.5E-40 5.4E-45 304.0 37.4 335 18-364 1-343 (343)
53 cd08240 6_hydroxyhexanoate_dh_ 100.0 1.7E-40 3.6E-45 305.9 36.2 337 18-365 1-350 (350)
54 cd08279 Zn_ADH_class_III Class 100.0 2.8E-40 6.1E-45 305.5 36.6 334 18-362 1-362 (363)
55 cd08261 Zn_ADH7 Alcohol dehydr 100.0 6.7E-40 1.4E-44 300.4 38.2 335 18-365 1-337 (337)
56 cd08287 FDH_like_ADH3 formalde 100.0 6.2E-40 1.3E-44 301.6 36.4 334 18-364 1-344 (345)
57 cd08263 Zn_ADH10 Alcohol dehyd 100.0 8.2E-40 1.8E-44 303.0 36.4 336 18-364 1-367 (367)
58 TIGR01751 crot-CoA-red crotony 100.0 5E-40 1.1E-44 307.2 35.3 342 15-365 5-387 (398)
59 cd08260 Zn_ADH6 Alcohol dehydr 100.0 1.4E-39 3E-44 299.2 37.0 335 18-364 1-344 (345)
60 cd08282 PFDH_like Pseudomonas 100.0 2.5E-39 5.4E-44 300.3 37.2 334 18-365 1-375 (375)
61 cd08236 sugar_DH NAD(P)-depend 100.0 2.2E-39 4.8E-44 297.7 36.4 333 18-363 1-343 (343)
62 cd05283 CAD1 Cinnamyl alcohol 100.0 1.4E-39 3E-44 298.1 34.7 326 20-364 2-337 (337)
63 cd05281 TDH Threonine dehydrog 100.0 2.6E-39 5.6E-44 296.9 36.4 337 18-365 1-341 (341)
64 cd08291 ETR_like_1 2-enoyl thi 100.0 7E-40 1.5E-44 298.5 32.0 305 18-364 1-324 (324)
65 cd08234 threonine_DH_like L-th 100.0 3.8E-39 8.3E-44 295.1 37.0 331 18-363 1-333 (334)
66 TIGR00692 tdh L-threonine 3-de 100.0 3.1E-39 6.8E-44 296.2 35.5 329 27-365 9-340 (340)
67 PRK09422 ethanol-active dehydr 100.0 5.2E-39 1.1E-43 294.6 36.2 331 18-365 1-336 (338)
68 cd08297 CAD3 Cinnamyl alcohol 100.0 9.2E-39 2E-43 293.3 37.4 334 18-365 1-341 (341)
69 PRK13771 putative alcohol dehy 100.0 4E-39 8.6E-44 294.9 33.8 327 18-365 1-333 (334)
70 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.1E-38 2.3E-43 292.5 36.6 333 18-365 1-338 (338)
71 TIGR03366 HpnZ_proposed putati 100.0 7.6E-40 1.7E-44 291.7 25.0 260 76-344 1-279 (280)
72 PLN03154 putative allyl alcoho 100.0 2.5E-38 5.5E-43 290.1 33.8 305 16-365 7-345 (348)
73 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1E-37 2.3E-42 285.2 36.3 327 18-364 1-332 (332)
74 cd08298 CAD2 Cinnamyl alcohol 100.0 1.8E-37 3.9E-42 283.4 35.2 320 18-363 1-329 (329)
75 KOG0025 Zn2+-binding dehydroge 100.0 3.2E-38 6.9E-43 263.3 27.2 313 13-364 15-351 (354)
76 cd08266 Zn_ADH_like1 Alcohol d 100.0 3.4E-37 7.3E-42 282.8 36.2 334 18-365 1-342 (342)
77 cd08293 PTGR2 Prostaglandin re 100.0 1E-37 2.2E-42 286.8 32.1 299 26-365 20-345 (345)
78 cd08292 ETR_like_2 2-enoyl thi 100.0 2E-37 4.4E-42 282.4 33.5 306 18-364 1-324 (324)
79 cd08295 double_bond_reductase_ 100.0 2.9E-37 6.3E-42 282.9 33.5 296 26-365 18-338 (338)
80 TIGR02825 B4_12hDH leukotriene 100.0 1.8E-37 3.9E-42 282.8 30.8 289 25-364 15-325 (325)
81 cd08294 leukotriene_B4_DH_like 100.0 8.1E-37 1.8E-41 279.1 32.4 297 17-365 2-329 (329)
82 cd08264 Zn_ADH_like2 Alcohol d 100.0 1.1E-36 2.4E-41 277.7 33.2 318 18-361 1-324 (325)
83 cd08274 MDR9 Medium chain dehy 100.0 1.4E-36 2.9E-41 280.0 33.7 325 18-365 1-350 (350)
84 cd08245 CAD Cinnamyl alcohol d 100.0 4.5E-36 9.6E-41 274.3 34.7 325 19-363 1-330 (330)
85 cd08258 Zn_ADH4 Alcohol dehydr 100.0 5.8E-36 1.3E-40 270.2 32.1 298 18-326 1-306 (306)
86 cd08244 MDR_enoyl_red Possible 100.0 4.5E-35 9.8E-40 266.9 34.9 311 18-365 1-324 (324)
87 cd08269 Zn_ADH9 Alcohol dehydr 100.0 5.1E-35 1.1E-39 265.2 34.0 301 24-363 2-311 (312)
88 TIGR02817 adh_fam_1 zinc-bindi 100.0 4.5E-35 9.7E-40 268.4 32.5 298 26-364 14-334 (336)
89 cd08290 ETR 2-enoyl thioester 100.0 8E-35 1.7E-39 267.2 32.1 311 18-365 1-341 (341)
90 PTZ00354 alcohol dehydrogenase 100.0 4.7E-34 1E-38 261.3 34.3 309 17-365 1-328 (334)
91 cd08276 MDR7 Medium chain dehy 100.0 1E-33 2.2E-38 259.3 36.0 329 18-365 1-336 (336)
92 cd08270 MDR4 Medium chain dehy 100.0 7.2E-34 1.6E-38 256.8 33.0 293 18-365 1-305 (305)
93 PRK10754 quinone oxidoreductas 100.0 4.5E-34 9.8E-39 260.7 31.5 309 17-364 1-326 (327)
94 KOG1198 Zinc-binding oxidoredu 100.0 1E-34 2.2E-39 261.3 26.2 299 27-365 18-345 (347)
95 COG2130 Putative NADP-dependen 100.0 9.2E-34 2E-38 239.1 27.0 294 25-365 23-338 (340)
96 cd08250 Mgc45594_like Mgc45594 100.0 3.5E-33 7.7E-38 255.1 33.1 305 18-364 2-329 (329)
97 cd08249 enoyl_reductase_like e 100.0 8.6E-34 1.9E-38 259.9 29.0 313 18-365 1-339 (339)
98 cd05282 ETR_like 2-enoyl thioe 100.0 3.3E-33 7.1E-38 254.6 31.6 296 28-364 13-323 (323)
99 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 4.5E-33 9.7E-38 253.9 32.2 308 18-365 1-325 (325)
100 cd08289 MDR_yhfp_like Yhfp put 100.0 1E-32 2.2E-37 251.7 31.6 310 18-365 1-326 (326)
101 TIGR02823 oxido_YhdH putative 100.0 2.4E-32 5.2E-37 248.9 32.7 306 19-365 1-323 (323)
102 cd08243 quinone_oxidoreductase 100.0 2.8E-32 6E-37 248.0 32.1 305 18-363 1-319 (320)
103 cd08253 zeta_crystallin Zeta-c 100.0 6.5E-32 1.4E-36 245.8 33.5 312 18-365 1-325 (325)
104 cd08252 AL_MDR Arginate lyase 100.0 6.6E-32 1.4E-36 247.4 33.0 307 18-364 1-336 (336)
105 cd08248 RTN4I1 Human Reticulon 100.0 2.8E-32 6.1E-37 251.2 28.7 307 18-364 1-350 (350)
106 cd05276 p53_inducible_oxidored 100.0 2E-31 4.3E-36 242.3 33.6 305 18-363 1-323 (323)
107 cd08272 MDR6 Medium chain dehy 100.0 2.1E-31 4.6E-36 242.7 33.0 307 18-365 1-326 (326)
108 cd08288 MDR_yhdh Yhdh putative 100.0 2.4E-31 5.2E-36 242.4 32.9 307 18-365 1-324 (324)
109 cd08247 AST1_like AST1 is a cy 100.0 2.5E-31 5.3E-36 245.1 33.0 315 19-365 2-352 (352)
110 cd05288 PGDH Prostaglandin deh 100.0 2.2E-31 4.9E-36 243.2 31.4 292 27-363 18-329 (329)
111 cd08271 MDR5 Medium chain dehy 100.0 3.6E-31 7.8E-36 241.2 32.2 308 18-365 1-325 (325)
112 cd05188 MDR Medium chain reduc 100.0 2.5E-31 5.5E-36 235.8 28.5 266 43-322 1-270 (271)
113 cd05286 QOR2 Quinone oxidoredu 100.0 1.4E-30 3E-35 236.4 33.8 296 27-365 12-320 (320)
114 cd08273 MDR8 Medium chain dehy 100.0 9.2E-31 2E-35 239.3 32.0 299 19-363 2-330 (331)
115 cd08251 polyketide_synthase po 100.0 2.8E-31 6E-36 239.4 27.6 289 36-363 2-303 (303)
116 TIGR02824 quinone_pig3 putativ 100.0 6E-30 1.3E-34 232.9 34.1 307 18-365 1-325 (325)
117 cd08268 MDR2 Medium chain dehy 100.0 1.4E-29 3.1E-34 230.8 35.0 312 18-365 1-328 (328)
118 cd08241 QOR1 Quinone oxidoredu 100.0 1.6E-29 3.5E-34 229.9 32.9 305 18-364 1-323 (323)
119 cd05289 MDR_like_2 alcohol deh 100.0 5.3E-30 1.1E-34 231.7 28.8 301 18-363 1-309 (309)
120 cd08267 MDR1 Medium chain dehy 100.0 9.2E-30 2E-34 231.3 28.8 295 30-363 15-319 (319)
121 cd08275 MDR3 Medium chain dehy 100.0 9.4E-29 2E-33 226.4 34.7 296 27-365 12-337 (337)
122 cd05195 enoyl_red enoyl reduct 100.0 8.1E-29 1.7E-33 221.8 24.7 276 42-363 1-293 (293)
123 cd08255 2-desacetyl-2-hydroxye 100.0 7.8E-28 1.7E-32 214.4 26.3 247 69-363 16-277 (277)
124 smart00829 PKS_ER Enoylreducta 100.0 1.7E-27 3.7E-32 212.8 28.2 271 46-363 2-288 (288)
125 KOG1202 Animal-type fatty acid 99.9 4.7E-27 1E-31 226.1 17.6 294 27-365 1427-1741(2376)
126 KOG1196 Predicted NAD-dependen 99.9 6.6E-24 1.4E-28 179.0 25.3 293 27-365 20-340 (343)
127 PF08240 ADH_N: Alcohol dehydr 99.9 8.1E-24 1.8E-28 160.6 8.2 109 41-152 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 8.5E-16 1.8E-20 120.6 13.7 128 192-325 1-130 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.4 2.4E-11 5.1E-16 111.8 17.1 173 170-364 188-375 (413)
130 PRK09424 pntA NAD(P) transhydr 99.3 3.6E-11 7.7E-16 113.4 15.7 155 179-335 162-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.3 3.3E-12 7.2E-17 99.7 4.3 119 226-363 1-127 (127)
132 PRK11873 arsM arsenite S-adeno 98.4 2.5E-06 5.4E-11 75.7 11.9 172 176-362 72-258 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.4 6E-06 1.3E-10 78.2 14.1 105 180-287 162-285 (511)
134 PF11017 DUF2855: Protein of u 98.3 5.4E-05 1.2E-09 67.0 17.0 257 75-356 32-311 (314)
135 cd05213 NAD_bind_Glutamyl_tRNA 98.2 3.8E-06 8.2E-11 75.8 7.7 108 147-268 139-251 (311)
136 PRK00517 prmA ribosomal protei 98.2 7.6E-05 1.6E-09 65.2 15.3 131 137-288 78-215 (250)
137 PRK08306 dipicolinate synthase 98.1 0.00034 7.3E-09 62.6 17.9 114 181-311 151-264 (296)
138 PRK05476 S-adenosyl-L-homocyst 98.1 6E-05 1.3E-09 70.1 13.0 103 170-290 198-303 (425)
139 TIGR01035 hemA glutamyl-tRNA r 98.1 2.1E-07 4.6E-12 87.2 -3.3 159 76-267 89-252 (417)
140 TIGR00936 ahcY adenosylhomocys 97.8 0.00026 5.7E-09 65.5 12.0 93 179-289 192-285 (406)
141 COG2518 Pcm Protein-L-isoaspar 97.8 0.00028 6.1E-09 58.5 10.2 111 162-285 53-168 (209)
142 PRK00045 hemA glutamyl-tRNA re 97.7 6.9E-05 1.5E-09 70.6 7.0 158 76-266 91-253 (423)
143 PLN02494 adenosylhomocysteinas 97.6 0.00051 1.1E-08 64.3 10.9 91 180-288 252-343 (477)
144 PRK12771 putative glutamate sy 97.5 8.9E-05 1.9E-09 72.8 4.2 80 178-266 133-233 (564)
145 PRK08324 short chain dehydroge 97.4 0.0022 4.8E-08 64.5 13.1 117 136-264 385-507 (681)
146 PRK00377 cbiT cobalt-precorrin 97.4 0.0032 7E-08 52.9 12.2 103 174-285 33-144 (198)
147 TIGR00518 alaDH alanine dehydr 97.4 0.0017 3.7E-08 60.1 11.2 96 181-287 166-268 (370)
148 COG0300 DltE Short-chain dehyd 97.4 0.0016 3.5E-08 56.5 9.9 83 180-264 4-93 (265)
149 TIGR02853 spore_dpaA dipicolin 97.3 0.0033 7.2E-08 55.9 11.5 110 181-307 150-259 (287)
150 PF01488 Shikimate_DH: Shikima 97.3 0.0011 2.4E-08 51.9 7.4 73 181-266 11-86 (135)
151 COG2242 CobL Precorrin-6B meth 97.3 0.0049 1.1E-07 50.1 11.0 104 175-288 28-137 (187)
152 PTZ00075 Adenosylhomocysteinas 97.2 0.0028 6E-08 59.6 10.0 92 179-288 251-343 (476)
153 TIGR00406 prmA ribosomal prote 97.2 0.022 4.9E-07 50.8 15.2 96 179-287 157-260 (288)
154 PRK13943 protein-L-isoaspartat 97.1 0.0069 1.5E-07 54.7 11.7 102 174-285 73-179 (322)
155 PRK05993 short chain dehydroge 97.1 0.0057 1.2E-07 54.3 10.8 81 181-264 3-85 (277)
156 COG2264 PrmA Ribosomal protein 97.1 0.013 2.8E-07 51.8 12.4 136 138-288 121-265 (300)
157 COG4221 Short-chain alcohol de 97.1 0.0065 1.4E-07 51.6 10.1 81 181-265 5-91 (246)
158 PRK05786 fabG 3-ketoacyl-(acyl 97.1 0.023 5E-07 49.0 14.0 105 181-288 4-137 (238)
159 COG2230 Cfa Cyclopropane fatty 96.9 0.025 5.5E-07 49.6 12.9 103 174-290 65-180 (283)
160 TIGR02469 CbiT precorrin-6Y C5 96.9 0.025 5.3E-07 43.2 11.7 102 175-285 13-121 (124)
161 PF01135 PCMT: Protein-L-isoas 96.8 0.0045 9.8E-08 52.2 7.3 103 172-285 63-171 (209)
162 PRK12742 oxidoreductase; Provi 96.8 0.03 6.4E-07 48.2 12.5 79 181-265 5-85 (237)
163 PRK13942 protein-L-isoaspartat 96.8 0.032 6.8E-07 47.4 12.0 103 173-285 68-175 (212)
164 COG3967 DltE Short-chain dehyd 96.8 0.015 3.3E-07 47.9 9.4 82 181-264 4-87 (245)
165 PRK14967 putative methyltransf 96.7 0.038 8.3E-07 47.3 12.3 99 174-285 29-158 (223)
166 KOG1209 1-Acyl dihydroxyaceton 96.7 0.041 8.8E-07 45.7 11.5 81 181-264 6-90 (289)
167 PF12847 Methyltransf_18: Meth 96.7 0.015 3.3E-07 43.6 8.6 94 181-285 1-110 (112)
168 PRK08017 oxidoreductase; Provi 96.7 0.021 4.5E-07 49.9 10.6 79 183-264 3-83 (256)
169 PRK06182 short chain dehydroge 96.6 0.022 4.9E-07 50.3 10.8 81 181-265 2-84 (273)
170 PF06325 PrmA: Ribosomal prote 96.6 0.01 2.2E-07 52.8 8.3 134 137-289 119-262 (295)
171 PRK05693 short chain dehydroge 96.6 0.023 5E-07 50.3 10.6 78 183-264 2-81 (274)
172 TIGR00438 rrmJ cell division p 96.6 0.044 9.6E-07 45.5 11.6 102 177-286 28-146 (188)
173 PRK08618 ornithine cyclodeamin 96.5 0.098 2.1E-06 47.6 14.3 102 174-290 119-225 (325)
174 PRK11705 cyclopropane fatty ac 96.5 0.048 1E-06 50.8 12.4 99 175-286 161-267 (383)
175 TIGR00080 pimt protein-L-isoas 96.5 0.044 9.5E-07 46.7 11.4 103 173-285 69-176 (215)
176 KOG1205 Predicted dehydrogenas 96.5 0.081 1.8E-06 46.6 12.9 81 181-264 11-100 (282)
177 PRK13944 protein-L-isoaspartat 96.5 0.078 1.7E-06 44.8 12.4 102 174-285 65-172 (205)
178 PF02353 CMAS: Mycolic acid cy 96.4 0.011 2.3E-07 52.3 7.1 100 174-286 55-166 (273)
179 PRK06139 short chain dehydroge 96.4 0.044 9.5E-07 50.0 11.0 81 181-264 6-93 (330)
180 COG1748 LYS9 Saccharopine dehy 96.4 0.043 9.2E-07 50.5 10.7 97 183-287 2-100 (389)
181 COG2227 UbiG 2-polyprenyl-3-me 96.3 0.039 8.4E-07 46.8 9.6 95 180-285 58-160 (243)
182 PRK08261 fabG 3-ketoacyl-(acyl 96.3 0.11 2.4E-06 49.6 14.1 80 181-264 209-293 (450)
183 PRK06057 short chain dehydroge 96.2 0.055 1.2E-06 47.3 10.7 81 181-265 6-89 (255)
184 PF03435 Saccharop_dh: Sacchar 96.2 0.031 6.7E-07 52.3 9.6 93 185-284 1-96 (386)
185 PRK07060 short chain dehydroge 96.2 0.05 1.1E-06 47.0 10.3 78 181-265 8-87 (245)
186 PRK08177 short chain dehydroge 96.2 0.043 9.3E-07 46.9 9.6 78 183-265 2-81 (225)
187 PF13460 NAD_binding_10: NADH( 96.2 0.09 2E-06 43.2 11.2 91 185-287 1-98 (183)
188 TIGR02356 adenyl_thiF thiazole 96.2 0.11 2.3E-06 43.8 11.5 35 181-216 20-54 (202)
189 PF00106 adh_short: short chai 96.1 0.034 7.3E-07 45.0 8.2 81 183-265 1-90 (167)
190 PRK13940 glutamyl-tRNA reducta 96.1 0.028 6E-07 52.7 8.2 74 180-266 179-253 (414)
191 PRK06949 short chain dehydroge 96.1 0.079 1.7E-06 46.2 10.9 82 180-264 7-95 (258)
192 PLN03209 translocon at the inn 96.0 0.12 2.6E-06 50.2 12.4 45 175-221 73-118 (576)
193 PRK07402 precorrin-6B methylas 96.0 0.2 4.3E-06 41.9 12.5 105 174-286 33-142 (196)
194 PRK06463 fabG 3-ketoacyl-(acyl 96.0 0.077 1.7E-06 46.3 10.4 82 181-265 6-89 (255)
195 TIGR01470 cysG_Nterm siroheme 96.0 0.26 5.7E-06 41.5 13.0 91 181-285 8-99 (205)
196 PRK07825 short chain dehydroge 96.0 0.073 1.6E-06 47.0 10.3 80 182-264 5-87 (273)
197 PRK07814 short chain dehydroge 96.0 0.096 2.1E-06 46.0 10.9 81 181-264 9-96 (263)
198 PF02826 2-Hacid_dh_C: D-isome 95.9 0.055 1.2E-06 44.5 8.7 89 180-286 34-127 (178)
199 TIGR01809 Shik-DH-AROM shikima 95.9 0.034 7.3E-07 49.5 7.9 76 181-266 124-201 (282)
200 PRK05866 short chain dehydroge 95.9 0.11 2.5E-06 46.4 11.3 82 181-265 39-127 (293)
201 KOG1201 Hydroxysteroid 17-beta 95.9 0.11 2.4E-06 45.6 10.6 81 180-264 36-123 (300)
202 PRK07340 ornithine cyclodeamin 95.9 0.11 2.5E-06 46.6 11.2 103 174-290 117-221 (304)
203 PRK12828 short chain dehydroge 95.9 0.087 1.9E-06 45.2 10.2 80 181-264 6-91 (239)
204 PRK07502 cyclohexadienyl dehyd 95.9 0.12 2.6E-06 46.6 11.4 90 183-286 7-100 (307)
205 PRK07533 enoyl-(acyl carrier p 95.9 0.11 2.3E-06 45.6 10.7 81 181-264 9-97 (258)
206 PRK08862 short chain dehydroge 95.8 0.11 2.4E-06 44.6 10.5 82 181-264 4-92 (227)
207 PRK06200 2,3-dihydroxy-2,3-dih 95.8 0.12 2.6E-06 45.3 11.0 81 181-264 5-89 (263)
208 PRK07904 short chain dehydroge 95.8 0.081 1.8E-06 46.2 9.7 84 179-265 5-97 (253)
209 PRK06196 oxidoreductase; Provi 95.8 0.088 1.9E-06 47.7 10.2 81 181-264 25-108 (315)
210 PRK06505 enoyl-(acyl carrier p 95.8 0.11 2.5E-06 45.9 10.6 81 181-264 6-94 (271)
211 PRK00107 gidB 16S rRNA methylt 95.8 0.11 2.3E-06 43.2 9.6 97 178-285 42-144 (187)
212 TIGR03325 BphB_TodD cis-2,3-di 95.7 0.099 2.1E-06 45.9 10.1 81 181-264 4-88 (262)
213 PRK08217 fabG 3-ketoacyl-(acyl 95.7 0.16 3.5E-06 44.0 11.4 81 181-264 4-91 (253)
214 PRK05872 short chain dehydroge 95.7 0.1 2.3E-06 46.7 10.2 82 181-265 8-95 (296)
215 PRK07677 short chain dehydroge 95.7 0.13 2.8E-06 44.8 10.4 80 182-264 1-87 (252)
216 PRK06841 short chain dehydroge 95.7 0.15 3.2E-06 44.5 10.8 82 181-265 14-99 (255)
217 PRK06483 dihydromonapterin red 95.7 0.13 2.8E-06 44.3 10.3 80 182-265 2-84 (236)
218 cd00755 YgdL_like Family of ac 95.6 0.071 1.5E-06 45.8 8.3 34 182-216 11-44 (231)
219 TIGR01832 kduD 2-deoxy-D-gluco 95.6 0.19 4.1E-06 43.5 11.3 82 181-265 4-90 (248)
220 COG0373 HemA Glutamyl-tRNA red 95.6 0.095 2.1E-06 48.6 9.5 73 180-266 176-249 (414)
221 cd01065 NAD_bind_Shikimate_DH 95.6 0.14 3E-06 40.9 9.6 101 174-287 10-117 (155)
222 PRK08642 fabG 3-ketoacyl-(acyl 95.6 0.13 2.8E-06 44.7 10.2 82 182-264 5-90 (253)
223 PRK07774 short chain dehydroge 95.6 0.13 2.9E-06 44.5 10.2 82 181-265 5-93 (250)
224 PRK08339 short chain dehydroge 95.6 0.13 2.7E-06 45.3 10.0 81 181-265 7-95 (263)
225 PRK07806 short chain dehydroge 95.5 0.41 8.9E-06 41.4 13.2 104 181-287 5-135 (248)
226 PRK07831 short chain dehydroge 95.5 0.18 4E-06 44.1 11.0 84 179-265 14-107 (262)
227 PRK05867 short chain dehydroge 95.5 0.16 3.4E-06 44.3 10.5 81 181-264 8-95 (253)
228 COG0421 SpeE Spermidine syntha 95.5 0.22 4.8E-06 44.0 11.2 98 183-286 78-190 (282)
229 PRK12829 short chain dehydroge 95.5 0.13 2.9E-06 44.9 10.0 83 180-265 9-96 (264)
230 PF01262 AlaDh_PNT_C: Alanine 95.5 0.14 3E-06 41.7 9.3 99 182-286 20-139 (168)
231 PRK00811 spermidine synthase; 95.5 0.11 2.3E-06 46.3 9.3 98 180-286 75-191 (283)
232 PRK06500 short chain dehydroge 95.5 0.16 3.5E-06 44.0 10.3 82 181-265 5-90 (249)
233 PRK12549 shikimate 5-dehydroge 95.5 0.1 2.2E-06 46.5 9.0 46 180-226 125-171 (284)
234 COG1179 Dinucleotide-utilizing 95.5 0.074 1.6E-06 45.1 7.5 36 181-217 29-64 (263)
235 PRK03369 murD UDP-N-acetylmura 95.5 0.094 2E-06 50.6 9.5 73 179-266 9-81 (488)
236 PRK06718 precorrin-2 dehydroge 95.5 0.47 1E-05 39.9 12.5 89 181-285 9-99 (202)
237 PRK08628 short chain dehydroge 95.4 0.12 2.7E-06 45.1 9.6 81 181-264 6-92 (258)
238 PRK06180 short chain dehydroge 95.4 0.2 4.4E-06 44.3 11.0 82 181-265 3-88 (277)
239 PRK07062 short chain dehydroge 95.4 0.17 3.6E-06 44.4 10.4 82 181-265 7-97 (265)
240 PRK08589 short chain dehydroge 95.4 0.18 4E-06 44.5 10.7 81 181-264 5-91 (272)
241 COG2519 GCD14 tRNA(1-methylade 95.4 0.15 3.2E-06 43.7 9.4 104 174-287 87-196 (256)
242 PRK08415 enoyl-(acyl carrier p 95.4 0.21 4.5E-06 44.3 11.0 82 181-265 4-93 (274)
243 PF01118 Semialdhyde_dh: Semia 95.4 0.072 1.6E-06 40.7 7.0 92 184-286 1-97 (121)
244 PRK09072 short chain dehydroge 95.4 0.16 3.4E-06 44.6 10.1 81 181-265 4-90 (263)
245 PRK01581 speE spermidine synth 95.4 0.32 6.9E-06 44.5 11.9 98 180-286 149-268 (374)
246 PRK04148 hypothetical protein; 95.4 0.46 9.9E-06 36.8 11.1 93 180-285 15-108 (134)
247 PRK00312 pcm protein-L-isoaspa 95.4 0.36 7.7E-06 40.9 11.8 100 174-285 71-174 (212)
248 PRK12939 short chain dehydroge 95.4 0.23 5E-06 43.0 10.9 82 181-265 6-94 (250)
249 PRK07231 fabG 3-ketoacyl-(acyl 95.3 0.21 4.5E-06 43.3 10.6 82 181-265 4-91 (251)
250 PRK06603 enoyl-(acyl carrier p 95.3 0.2 4.4E-06 43.9 10.6 81 181-264 7-95 (260)
251 PRK08317 hypothetical protein; 95.3 0.21 4.5E-06 43.0 10.5 103 174-286 12-124 (241)
252 PRK06198 short chain dehydroge 95.3 0.23 5E-06 43.4 10.8 83 181-265 5-94 (260)
253 PF00670 AdoHcyase_NAD: S-aden 95.3 0.27 6E-06 39.3 10.0 93 178-288 19-112 (162)
254 PRK07453 protochlorophyllide o 95.3 0.23 4.9E-06 45.1 11.0 81 181-264 5-92 (322)
255 PRK08267 short chain dehydroge 95.3 0.19 4.2E-06 43.9 10.3 81 183-265 2-87 (260)
256 cd05311 NAD_bind_2_malic_enz N 95.3 0.47 1E-05 40.6 12.2 91 180-286 23-128 (226)
257 PRK08265 short chain dehydroge 95.2 0.25 5.4E-06 43.3 10.8 82 181-265 5-90 (261)
258 PF01408 GFO_IDH_MocA: Oxidore 95.2 0.44 9.5E-06 36.1 10.9 87 184-283 2-90 (120)
259 TIGR02355 moeB molybdopterin s 95.2 0.35 7.6E-06 41.9 11.3 34 182-216 24-57 (240)
260 PRK08644 thiamine biosynthesis 95.2 0.32 7E-06 41.2 10.8 35 181-216 27-61 (212)
261 PRK05854 short chain dehydroge 95.2 0.2 4.3E-06 45.4 10.2 81 181-264 13-102 (313)
262 PRK07478 short chain dehydroge 95.2 0.28 6E-06 42.7 10.9 82 181-265 5-93 (254)
263 PRK07688 thiamine/molybdopteri 95.1 0.31 6.8E-06 44.5 11.3 35 181-216 23-57 (339)
264 PRK08690 enoyl-(acyl carrier p 95.1 0.26 5.6E-06 43.3 10.6 82 181-265 5-94 (261)
265 PRK12475 thiamine/molybdopteri 95.1 0.32 7E-06 44.4 11.4 35 181-216 23-57 (338)
266 PRK12823 benD 1,6-dihydroxycyc 95.1 0.24 5.2E-06 43.3 10.4 81 181-264 7-93 (260)
267 PRK08703 short chain dehydroge 95.1 0.24 5.3E-06 42.6 10.3 83 181-265 5-97 (239)
268 PRK06079 enoyl-(acyl carrier p 95.1 0.27 5.8E-06 42.9 10.6 81 181-264 6-92 (252)
269 TIGR03840 TMPT_Se_Te thiopurin 95.1 0.36 7.8E-06 41.0 10.9 97 180-287 33-153 (213)
270 PRK08643 acetoin reductase; Va 95.1 0.29 6.3E-06 42.6 10.7 81 182-265 2-89 (256)
271 COG0031 CysK Cysteine synthase 95.1 1 2.2E-05 40.0 13.8 58 175-233 55-114 (300)
272 PRK08340 glucose-1-dehydrogena 95.1 0.31 6.8E-06 42.6 11.0 79 184-265 2-86 (259)
273 PRK08159 enoyl-(acyl carrier p 95.1 0.29 6.3E-06 43.3 10.8 82 180-264 8-97 (272)
274 PRK07523 gluconate 5-dehydroge 95.1 0.2 4.4E-06 43.6 9.7 82 181-265 9-97 (255)
275 COG3288 PntA NAD/NADP transhyd 95.1 0.24 5.3E-06 43.5 9.7 145 180-326 162-325 (356)
276 PLN02780 ketoreductase/ oxidor 95.1 0.21 4.4E-06 45.4 10.0 40 181-222 52-92 (320)
277 PRK07024 short chain dehydroge 95.0 0.25 5.4E-06 43.1 10.2 80 182-264 2-87 (257)
278 PRK13394 3-hydroxybutyrate deh 95.0 0.36 7.8E-06 42.1 11.2 82 181-265 6-94 (262)
279 TIGR03215 ac_ald_DH_ac acetald 95.0 0.43 9.3E-06 42.3 11.4 89 184-285 3-94 (285)
280 PRK06719 precorrin-2 dehydroge 95.0 0.81 1.8E-05 36.7 12.2 83 181-280 12-94 (157)
281 cd01487 E1_ThiF_like E1_ThiF_l 95.0 0.3 6.6E-06 40.0 9.9 33 184-217 1-33 (174)
282 PRK08300 acetaldehyde dehydrog 95.0 0.39 8.4E-06 42.8 11.1 94 183-285 5-100 (302)
283 PF01113 DapB_N: Dihydrodipico 95.0 0.38 8.3E-06 36.9 9.9 94 184-290 2-101 (124)
284 TIGR00446 nop2p NOL1/NOP2/sun 95.0 0.86 1.9E-05 40.1 13.4 100 176-285 66-198 (264)
285 PRK05717 oxidoreductase; Valid 95.0 0.35 7.5E-06 42.2 10.9 82 181-265 9-94 (255)
286 PRK06194 hypothetical protein; 95.0 0.36 7.7E-06 42.9 11.1 82 181-265 5-93 (287)
287 PRK06128 oxidoreductase; Provi 95.0 0.82 1.8E-05 41.0 13.5 81 181-264 54-143 (300)
288 PRK06172 short chain dehydroge 94.9 0.34 7.4E-06 42.1 10.8 82 181-265 6-94 (253)
289 PRK07109 short chain dehydroge 94.9 0.34 7.3E-06 44.3 11.1 82 181-265 7-95 (334)
290 cd01483 E1_enzyme_family Super 94.9 0.58 1.3E-05 36.8 11.1 32 184-216 1-32 (143)
291 PRK06179 short chain dehydroge 94.9 0.12 2.5E-06 45.6 7.8 78 182-265 4-83 (270)
292 PRK07326 short chain dehydroge 94.9 0.29 6.3E-06 42.0 10.1 82 181-265 5-92 (237)
293 PF13241 NAD_binding_7: Putati 94.9 0.41 8.8E-06 35.4 9.5 87 181-287 6-92 (103)
294 PLN02366 spermidine synthase 94.9 0.26 5.5E-06 44.4 9.9 99 180-286 90-206 (308)
295 PRK07063 short chain dehydroge 94.9 0.25 5.4E-06 43.2 9.8 81 181-264 6-95 (260)
296 PRK07984 enoyl-(acyl carrier p 94.9 0.33 7.2E-06 42.7 10.6 81 181-264 5-93 (262)
297 PRK12481 2-deoxy-D-gluconate 3 94.9 0.39 8.4E-06 41.8 11.0 81 181-264 7-92 (251)
298 PRK12384 sorbitol-6-phosphate 94.9 0.34 7.5E-06 42.2 10.7 80 182-264 2-90 (259)
299 PRK07035 short chain dehydroge 94.9 0.37 8E-06 41.8 10.8 81 181-264 7-94 (252)
300 PF00899 ThiF: ThiF family; I 94.9 0.48 1E-05 36.9 10.3 96 182-285 2-122 (135)
301 PRK08226 short chain dehydroge 94.9 0.37 8.1E-06 42.1 10.9 81 181-264 5-91 (263)
302 PRK05690 molybdopterin biosynt 94.9 0.56 1.2E-05 40.8 11.7 35 181-216 31-65 (245)
303 PRK06953 short chain dehydroge 94.8 0.25 5.3E-06 42.1 9.4 77 183-265 2-80 (222)
304 KOG1200 Mitochondrial/plastidi 94.8 0.3 6.6E-06 40.1 9.0 80 183-265 15-100 (256)
305 PRK07454 short chain dehydroge 94.8 0.48 1E-05 40.8 11.4 83 180-265 4-93 (241)
306 PRK08264 short chain dehydroge 94.8 0.17 3.6E-06 43.6 8.4 77 181-265 5-83 (238)
307 PLN02253 xanthoxin dehydrogena 94.8 0.29 6.2E-06 43.4 10.1 82 181-265 17-104 (280)
308 PRK06935 2-deoxy-D-gluconate 3 94.8 0.38 8.3E-06 42.0 10.8 82 181-265 14-101 (258)
309 PRK04266 fibrillarin; Provisio 94.8 0.82 1.8E-05 39.2 12.3 102 175-285 66-175 (226)
310 PLN03075 nicotianamine synthas 94.8 0.27 5.8E-06 43.7 9.5 100 180-286 122-233 (296)
311 TIGR00417 speE spermidine synt 94.8 0.61 1.3E-05 41.2 12.0 98 180-286 71-186 (270)
312 PLN02819 lysine-ketoglutarate 94.8 0.42 9.2E-06 49.9 12.2 138 181-326 568-721 (1042)
313 PRK05875 short chain dehydroge 94.8 0.4 8.6E-06 42.3 10.9 81 181-264 6-95 (276)
314 PRK06138 short chain dehydroge 94.8 0.31 6.7E-06 42.2 10.1 82 181-265 4-91 (252)
315 PRK08277 D-mannonate oxidoredu 94.8 0.39 8.5E-06 42.4 10.8 81 181-264 9-96 (278)
316 PRK07576 short chain dehydroge 94.8 0.44 9.6E-06 41.8 11.0 81 181-264 8-95 (264)
317 TIGR02354 thiF_fam2 thiamine b 94.7 0.63 1.4E-05 39.0 11.3 35 181-216 20-54 (200)
318 PRK08063 enoyl-(acyl carrier p 94.7 0.35 7.5E-06 41.9 10.2 82 181-264 3-91 (250)
319 TIGR00138 gidB 16S rRNA methyl 94.7 0.3 6.4E-06 40.3 9.2 94 181-285 42-141 (181)
320 COG2226 UbiE Methylase involve 94.7 0.83 1.8E-05 39.3 12.0 106 175-291 45-161 (238)
321 KOG1252 Cystathionine beta-syn 94.7 1.2 2.6E-05 39.9 13.1 57 175-232 96-155 (362)
322 PRK15116 sulfur acceptor prote 94.7 0.7 1.5E-05 40.6 11.8 35 181-216 29-63 (268)
323 PRK04457 spermidine synthase; 94.7 0.92 2E-05 39.9 12.7 97 180-285 65-176 (262)
324 PRK12743 oxidoreductase; Provi 94.7 0.41 8.9E-06 41.8 10.6 81 182-264 2-89 (256)
325 PRK08213 gluconate 5-dehydroge 94.7 0.46 1E-05 41.5 10.9 82 181-265 11-99 (259)
326 PRK07890 short chain dehydroge 94.6 0.45 9.7E-06 41.4 10.8 82 181-265 4-92 (258)
327 PRK06482 short chain dehydroge 94.6 0.38 8.1E-06 42.5 10.4 80 183-265 3-86 (276)
328 PRK05562 precorrin-2 dehydroge 94.6 1.5 3.3E-05 37.3 13.2 92 181-286 24-116 (223)
329 PRK05597 molybdopterin biosynt 94.6 0.44 9.5E-06 43.9 10.9 35 181-216 27-61 (355)
330 PRK06141 ornithine cyclodeamin 94.6 1.1 2.4E-05 40.5 13.4 100 175-288 118-221 (314)
331 TIGR02992 ectoine_eutC ectoine 94.6 0.79 1.7E-05 41.8 12.3 95 180-288 127-226 (326)
332 cd00757 ThiF_MoeB_HesA_family 94.6 0.7 1.5E-05 39.7 11.4 34 182-216 21-54 (228)
333 PRK06125 short chain dehydroge 94.5 0.44 9.6E-06 41.6 10.5 79 181-265 6-91 (259)
334 TIGR03206 benzo_BadH 2-hydroxy 94.5 0.52 1.1E-05 40.8 10.9 81 181-264 2-89 (250)
335 PRK08328 hypothetical protein; 94.5 0.46 1E-05 40.9 10.3 35 181-216 26-60 (231)
336 PRK12429 3-hydroxybutyrate deh 94.5 0.42 9.1E-06 41.6 10.3 81 181-264 3-90 (258)
337 PRK07856 short chain dehydroge 94.5 0.4 8.6E-06 41.7 10.1 77 181-264 5-84 (252)
338 PRK05876 short chain dehydroge 94.5 0.34 7.3E-06 42.9 9.7 81 181-264 5-92 (275)
339 PLN02233 ubiquinone biosynthes 94.5 0.53 1.1E-05 41.4 10.8 104 175-288 67-184 (261)
340 PRK08416 7-alpha-hydroxysteroi 94.5 0.5 1.1E-05 41.3 10.8 81 181-264 7-96 (260)
341 PF13823 ADH_N_assoc: Alcohol 94.5 0.052 1.1E-06 27.8 2.6 22 18-39 1-22 (23)
342 PRK08251 short chain dehydroge 94.5 0.58 1.3E-05 40.5 11.1 80 182-264 2-90 (248)
343 PRK06197 short chain dehydroge 94.5 0.33 7.1E-06 43.7 9.8 81 181-264 15-104 (306)
344 PRK06114 short chain dehydroge 94.5 0.55 1.2E-05 40.9 10.9 82 181-265 7-96 (254)
345 PRK09242 tropinone reductase; 94.5 0.59 1.3E-05 40.7 11.1 82 181-265 8-98 (257)
346 PLN03139 formate dehydrogenase 94.5 0.68 1.5E-05 43.0 11.7 91 181-288 198-293 (386)
347 PRK06181 short chain dehydroge 94.4 0.61 1.3E-05 40.8 11.2 80 183-265 2-88 (263)
348 PRK05653 fabG 3-ketoacyl-(acyl 94.4 0.55 1.2E-05 40.4 10.8 82 181-265 4-92 (246)
349 PRK12749 quinate/shikimate deh 94.4 0.32 7E-06 43.4 9.3 46 181-227 123-172 (288)
350 PRK06398 aldose dehydrogenase; 94.4 0.29 6.2E-06 42.8 9.0 75 181-264 5-81 (258)
351 PRK14103 trans-aconitate 2-met 94.4 0.76 1.6E-05 40.2 11.5 98 174-285 22-125 (255)
352 PF01209 Ubie_methyltran: ubiE 94.4 0.23 4.9E-06 42.8 7.9 105 175-289 41-156 (233)
353 PF08704 GCD14: tRNA methyltra 94.3 0.16 3.4E-06 44.0 6.9 109 174-288 33-148 (247)
354 PRK08993 2-deoxy-D-gluconate 3 94.3 0.57 1.2E-05 40.8 10.7 82 181-265 9-95 (253)
355 PRK05884 short chain dehydroge 94.3 0.29 6.3E-06 41.8 8.7 74 184-264 2-78 (223)
356 PRK07832 short chain dehydroge 94.3 0.53 1.2E-05 41.5 10.6 78 184-265 2-88 (272)
357 PRK01683 trans-aconitate 2-met 94.3 0.7 1.5E-05 40.4 11.2 99 174-285 24-129 (258)
358 PRK09186 flagellin modificatio 94.3 0.41 9E-06 41.6 9.8 81 181-264 3-92 (256)
359 PLN02823 spermine synthase 94.3 0.59 1.3E-05 42.6 10.9 97 181-286 103-220 (336)
360 PRK12936 3-ketoacyl-(acyl-carr 94.3 0.51 1.1E-05 40.6 10.3 82 181-265 5-90 (245)
361 PRK12747 short chain dehydroge 94.3 1.3 2.8E-05 38.4 12.9 38 181-219 3-41 (252)
362 PRK06914 short chain dehydroge 94.3 0.59 1.3E-05 41.3 10.9 80 182-265 3-91 (280)
363 COG0686 Ald Alanine dehydrogen 94.3 0.32 7E-06 43.0 8.6 96 182-287 168-269 (371)
364 PRK06720 hypothetical protein; 94.3 1.1 2.3E-05 36.6 11.3 82 181-265 15-103 (169)
365 PRK12550 shikimate 5-dehydroge 94.3 0.25 5.3E-06 43.7 8.1 74 173-264 113-187 (272)
366 PRK10538 malonic semialdehyde 94.3 0.51 1.1E-05 40.9 10.2 79 184-265 2-84 (248)
367 PRK08287 cobalt-precorrin-6Y C 94.3 1.1 2.5E-05 37.0 11.8 99 175-285 25-130 (187)
368 CHL00194 ycf39 Ycf39; Provisio 94.3 0.31 6.8E-06 44.1 9.1 71 184-264 2-73 (317)
369 PRK12548 shikimate 5-dehydroge 94.2 0.36 7.9E-06 43.1 9.3 36 181-217 125-160 (289)
370 PRK07067 sorbitol dehydrogenas 94.2 0.53 1.1E-05 41.0 10.3 81 181-264 5-89 (257)
371 KOG0725 Reductases with broad 94.2 0.36 7.9E-06 42.6 9.1 83 180-264 6-98 (270)
372 PRK06484 short chain dehydroge 94.2 0.52 1.1E-05 45.9 11.1 83 180-265 267-353 (520)
373 PRK06523 short chain dehydroge 94.2 0.44 9.6E-06 41.6 9.7 76 181-264 8-86 (260)
374 PRK08085 gluconate 5-dehydroge 94.1 0.52 1.1E-05 41.0 10.1 82 181-265 8-96 (254)
375 TIGR02632 RhaD_aldol-ADH rhamn 94.1 0.62 1.3E-05 47.0 11.7 117 137-265 378-503 (676)
376 PRK11207 tellurite resistance 94.1 1 2.2E-05 37.7 11.3 98 175-285 24-133 (197)
377 PRK09134 short chain dehydroge 94.1 0.74 1.6E-05 40.2 11.0 82 181-264 8-96 (258)
378 PRK08263 short chain dehydroge 94.1 0.79 1.7E-05 40.5 11.3 81 182-265 3-87 (275)
379 PRK07985 oxidoreductase; Provi 94.1 1.5 3.3E-05 39.2 13.1 81 181-264 48-137 (294)
380 PRK06124 gluconate 5-dehydroge 94.1 0.87 1.9E-05 39.6 11.3 82 181-265 10-98 (256)
381 PRK12826 3-ketoacyl-(acyl-carr 94.1 0.72 1.6E-05 39.8 10.8 82 181-265 5-93 (251)
382 PRK06113 7-alpha-hydroxysteroi 94.0 0.76 1.6E-05 40.0 10.9 81 181-264 10-97 (255)
383 PRK09291 short chain dehydroge 94.0 0.34 7.3E-06 42.2 8.6 75 182-264 2-82 (257)
384 COG0673 MviM Predicted dehydro 94.0 1.9 4.1E-05 39.4 13.9 128 184-328 5-145 (342)
385 PRK12367 short chain dehydroge 94.0 0.44 9.6E-06 41.4 9.2 75 181-265 13-89 (245)
386 PRK06997 enoyl-(acyl carrier p 94.0 0.67 1.5E-05 40.6 10.4 82 181-265 5-94 (260)
387 PRK07577 short chain dehydroge 94.0 0.37 8.1E-06 41.2 8.7 74 182-265 3-78 (234)
388 PRK07791 short chain dehydroge 94.0 0.66 1.4E-05 41.3 10.5 83 180-265 4-102 (286)
389 PLN00203 glutamyl-tRNA reducta 93.9 0.4 8.7E-06 46.4 9.4 74 182-266 266-340 (519)
390 PRK09730 putative NAD(P)-bindi 93.9 0.62 1.3E-05 40.2 10.0 81 183-265 2-89 (247)
391 PRK04207 glyceraldehyde-3-phos 93.9 0.67 1.4E-05 42.5 10.5 99 184-286 3-109 (341)
392 PRK13303 L-aspartate dehydroge 93.9 0.67 1.5E-05 40.8 10.2 89 184-285 3-91 (265)
393 PRK07424 bifunctional sterol d 93.9 0.49 1.1E-05 44.3 9.8 76 181-265 177-255 (406)
394 TIGR01963 PHB_DH 3-hydroxybuty 93.9 0.76 1.6E-05 39.8 10.6 79 183-264 2-87 (255)
395 PRK06077 fabG 3-ketoacyl-(acyl 93.9 1.9 4.1E-05 37.3 13.1 81 182-264 6-93 (252)
396 PRK07074 short chain dehydroge 93.9 0.85 1.8E-05 39.7 10.9 81 182-265 2-87 (257)
397 PRK00536 speE spermidine synth 93.9 0.34 7.5E-06 42.3 8.1 101 180-287 71-172 (262)
398 PLN03013 cysteine synthase 93.9 2 4.3E-05 40.5 13.5 57 175-232 167-226 (429)
399 TIGR02752 MenG_heptapren 2-hep 93.9 0.91 2E-05 38.9 10.9 103 175-287 39-152 (231)
400 TIGR00563 rsmB ribosomal RNA s 93.8 1.3 2.8E-05 42.1 12.7 104 175-286 232-368 (426)
401 PRK08303 short chain dehydroge 93.8 0.9 2E-05 40.9 11.2 81 181-264 7-105 (305)
402 PRK08762 molybdopterin biosynt 93.8 0.81 1.7E-05 42.6 11.1 35 181-216 134-168 (376)
403 PRK08936 glucose-1-dehydrogena 93.8 0.77 1.7E-05 40.1 10.6 83 181-265 6-95 (261)
404 PRK11579 putative oxidoreducta 93.8 1.3 2.8E-05 40.7 12.4 128 183-328 5-142 (346)
405 KOG1014 17 beta-hydroxysteroid 93.8 0.62 1.4E-05 41.2 9.5 81 180-265 47-136 (312)
406 PRK07097 gluconate 5-dehydroge 93.7 0.94 2E-05 39.7 10.9 82 181-265 9-97 (265)
407 PRK12825 fabG 3-ketoacyl-(acyl 93.7 0.63 1.4E-05 40.0 9.7 82 181-264 5-93 (249)
408 PRK06484 short chain dehydroge 93.7 0.69 1.5E-05 45.1 10.9 82 181-265 4-89 (520)
409 PRK12937 short chain dehydroge 93.7 0.79 1.7E-05 39.5 10.3 83 181-265 4-93 (245)
410 TIGR00715 precor6x_red precorr 93.7 0.26 5.6E-06 43.0 7.0 74 184-265 2-75 (256)
411 PRK00121 trmB tRNA (guanine-N( 93.6 1 2.2E-05 37.9 10.4 98 181-285 40-155 (202)
412 TIGR02371 ala_DH_arch alanine 93.6 1.9 4.1E-05 39.3 12.9 101 175-289 121-225 (325)
413 PF01564 Spermine_synth: Sperm 93.6 0.45 9.8E-06 41.4 8.5 95 181-286 76-191 (246)
414 PF02254 TrkA_N: TrkA-N domain 93.6 2.3 4.9E-05 31.9 11.9 92 185-285 1-95 (116)
415 PRK07574 formate dehydrogenase 93.6 0.71 1.5E-05 42.9 10.2 90 181-287 191-285 (385)
416 PRK08594 enoyl-(acyl carrier p 93.6 0.7 1.5E-05 40.4 9.8 81 181-264 6-96 (257)
417 cd01078 NAD_bind_H4MPT_DH NADP 93.6 1.2 2.6E-05 37.1 10.8 76 181-266 27-108 (194)
418 PRK11188 rrmJ 23S rRNA methylt 93.6 1.2 2.5E-05 37.8 10.8 98 179-285 49-164 (209)
419 PRK03612 spermidine synthase; 93.6 0.53 1.1E-05 45.8 9.7 98 180-286 296-415 (521)
420 COG4122 Predicted O-methyltran 93.5 2.2 4.8E-05 36.2 12.1 104 177-286 55-166 (219)
421 PRK06823 ornithine cyclodeamin 93.5 2.9 6.3E-05 37.8 13.8 103 174-290 120-226 (315)
422 PRK14982 acyl-ACP reductase; P 93.5 0.4 8.7E-06 43.6 8.2 94 180-288 153-248 (340)
423 PRK05557 fabG 3-ketoacyl-(acyl 93.5 0.95 2.1E-05 38.9 10.5 83 181-265 4-93 (248)
424 COG0169 AroE Shikimate 5-dehyd 93.5 0.25 5.4E-06 43.7 6.7 47 180-227 124-171 (283)
425 TIGR01289 LPOR light-dependent 93.5 0.84 1.8E-05 41.3 10.4 81 182-265 3-91 (314)
426 PTZ00098 phosphoethanolamine N 93.5 1.8 4E-05 38.0 12.3 105 173-287 44-157 (263)
427 PRK13302 putative L-aspartate 93.5 1 2.3E-05 39.7 10.7 89 183-285 7-97 (271)
428 PRK12938 acetyacetyl-CoA reduc 93.5 1 2.2E-05 38.8 10.6 83 181-265 2-91 (246)
429 PRK12746 short chain dehydroge 93.5 0.67 1.5E-05 40.2 9.5 84 181-265 5-100 (254)
430 PRK14175 bifunctional 5,10-met 93.4 0.92 2E-05 40.2 10.1 82 174-288 149-232 (286)
431 PRK13255 thiopurine S-methyltr 93.4 1.2 2.6E-05 38.0 10.6 97 178-285 34-154 (218)
432 PRK07370 enoyl-(acyl carrier p 93.4 0.58 1.3E-05 40.9 9.1 81 181-264 5-96 (258)
433 PRK08261 fabG 3-ketoacyl-(acyl 93.4 0.29 6.4E-06 46.7 7.7 42 176-219 28-74 (450)
434 PRK06947 glucose-1-dehydrogena 93.4 0.84 1.8E-05 39.5 10.0 80 183-264 3-89 (248)
435 PRK06101 short chain dehydroge 93.4 0.81 1.8E-05 39.5 9.8 41 183-225 2-43 (240)
436 PRK07411 hypothetical protein; 93.4 1 2.2E-05 42.1 10.9 34 182-216 38-71 (390)
437 PRK07666 fabG 3-ketoacyl-(acyl 93.4 0.77 1.7E-05 39.4 9.6 81 182-265 7-94 (239)
438 PRK05599 hypothetical protein; 93.3 1 2.3E-05 39.0 10.4 78 184-265 2-87 (246)
439 PRK08291 ectoine utilization p 93.3 1.9 4E-05 39.4 12.3 95 180-288 130-229 (330)
440 PRK05600 thiamine biosynthesis 93.3 1.2 2.6E-05 41.3 11.1 35 181-216 40-74 (370)
441 PRK05650 short chain dehydroge 93.3 1.2 2.7E-05 39.1 10.9 79 184-265 2-87 (270)
442 PRK09135 pteridine reductase; 93.2 1.2 2.7E-05 38.3 10.8 81 181-264 5-94 (249)
443 PRK13656 trans-2-enoyl-CoA red 93.2 1.1 2.4E-05 41.4 10.5 83 180-266 39-142 (398)
444 PRK11036 putative S-adenosyl-L 93.2 0.54 1.2E-05 41.2 8.4 95 180-285 43-148 (255)
445 PRK14903 16S rRNA methyltransf 93.2 2.1 4.6E-05 40.6 12.9 103 175-286 231-366 (431)
446 PLN02244 tocopherol O-methyltr 93.2 2.1 4.5E-05 39.3 12.5 96 180-286 117-223 (340)
447 PRK07878 molybdopterin biosynt 93.2 1.2 2.6E-05 41.6 11.2 35 181-216 41-75 (392)
448 PRK12935 acetoacetyl-CoA reduc 93.2 1.1 2.3E-05 38.7 10.3 83 181-265 5-94 (247)
449 COG1712 Predicted dinucleotide 93.1 1.1 2.3E-05 37.9 9.3 87 184-286 2-91 (255)
450 PRK07775 short chain dehydroge 93.1 1 2.2E-05 39.8 10.2 81 182-265 10-97 (274)
451 PRK06940 short chain dehydroge 93.1 0.93 2E-05 40.1 9.9 78 183-265 3-86 (275)
452 TIGR01318 gltD_gamma_fam gluta 93.1 0.49 1.1E-05 45.5 8.6 77 181-266 140-237 (467)
453 PRK14901 16S rRNA methyltransf 93.1 1.3 2.7E-05 42.2 11.2 105 175-285 246-383 (434)
454 PRK08945 putative oxoacyl-(acy 93.0 0.9 1.9E-05 39.3 9.6 84 179-265 9-102 (247)
455 PRK12744 short chain dehydroge 93.0 0.99 2.1E-05 39.3 9.9 83 181-265 7-99 (257)
456 cd01492 Aos1_SUMO Ubiquitin ac 92.9 1.4 3E-05 36.9 10.1 35 181-216 20-54 (197)
457 TIGR03589 PseB UDP-N-acetylglu 92.9 1 2.3E-05 40.9 10.1 79 181-264 3-83 (324)
458 PRK13304 L-aspartate dehydroge 92.9 1.5 3.3E-05 38.6 10.7 87 184-285 3-91 (265)
459 TIGR01829 AcAcCoA_reduct aceto 92.8 0.77 1.7E-05 39.4 8.9 80 183-265 1-88 (242)
460 TIGR02622 CDP_4_6_dhtase CDP-g 92.8 0.44 9.5E-06 43.8 7.7 77 181-264 3-84 (349)
461 PRK12809 putative oxidoreducta 92.8 0.56 1.2E-05 47.0 8.9 77 181-266 309-406 (639)
462 PRK07889 enoyl-(acyl carrier p 92.8 1.5 3.2E-05 38.3 10.6 82 181-265 6-95 (256)
463 smart00846 Gp_dh_N Glyceraldeh 92.8 1.1 2.4E-05 35.6 8.9 100 184-288 2-120 (149)
464 PLN00141 Tic62-NAD(P)-related 92.8 1 2.2E-05 39.2 9.6 39 181-221 16-55 (251)
465 COG3963 Phospholipid N-methylt 92.8 4.3 9.3E-05 32.7 11.8 122 161-288 27-158 (194)
466 PRK05855 short chain dehydroge 92.8 1.1 2.4E-05 44.2 10.9 82 181-265 314-402 (582)
467 PRK08220 2,3-dihydroxybenzoate 92.8 1.2 2.5E-05 38.6 10.0 77 181-265 7-86 (252)
468 PRK06701 short chain dehydroge 92.7 1.6 3.4E-05 39.0 10.9 83 180-265 44-134 (290)
469 PRK11933 yebU rRNA (cytosine-C 92.7 2.8 6.2E-05 40.1 13.0 99 178-285 110-241 (470)
470 COG1052 LdhA Lactate dehydroge 92.7 2.5 5.5E-05 38.3 12.1 89 181-288 145-238 (324)
471 PRK07792 fabG 3-ketoacyl-(acyl 92.7 1.2 2.6E-05 40.1 10.2 81 181-265 11-99 (306)
472 PRK06407 ornithine cyclodeamin 92.7 3.8 8.2E-05 36.8 13.2 97 180-290 115-216 (301)
473 COG1086 Predicted nucleoside-d 92.7 0.9 2E-05 43.7 9.4 81 180-264 248-334 (588)
474 PRK06171 sorbitol-6-phosphate 92.7 0.76 1.7E-05 40.2 8.7 77 181-264 8-86 (266)
475 PRK08223 hypothetical protein; 92.6 0.35 7.7E-06 42.7 6.3 35 181-216 26-60 (287)
476 TIGR01138 cysM cysteine syntha 92.6 6.4 0.00014 35.1 14.6 58 174-232 51-110 (290)
477 PRK05565 fabG 3-ketoacyl-(acyl 92.6 0.95 2E-05 39.0 9.2 81 182-265 5-93 (247)
478 PRK13256 thiopurine S-methyltr 92.6 1 2.3E-05 38.4 8.9 102 177-287 39-164 (226)
479 PRK07102 short chain dehydroge 92.6 0.97 2.1E-05 39.0 9.1 37 183-221 2-39 (243)
480 PRK06123 short chain dehydroge 92.5 1.5 3.2E-05 37.9 10.3 82 182-265 2-90 (248)
481 KOG1611 Predicted short chain- 92.5 0.36 7.9E-06 40.6 5.9 82 183-264 4-93 (249)
482 PRK14902 16S rRNA methyltransf 92.5 2.8 6E-05 40.0 12.8 102 175-285 244-378 (444)
483 PRK10901 16S rRNA methyltransf 92.4 2.7 5.9E-05 39.9 12.5 103 175-286 238-372 (427)
484 PRK00258 aroE shikimate 5-dehy 92.4 0.44 9.6E-06 42.3 6.8 113 180-305 121-239 (278)
485 COG0623 FabI Enoyl-[acyl-carri 92.4 5.1 0.00011 34.1 12.3 108 179-287 3-145 (259)
486 PRK14027 quinate/shikimate deh 92.3 0.46 9.9E-06 42.3 6.8 46 180-226 125-171 (283)
487 cd01080 NAD_bind_m-THF_DH_Cycl 92.3 1.7 3.6E-05 35.3 9.5 75 180-287 42-117 (168)
488 KOG0069 Glyoxylate/hydroxypyru 92.3 1.9 4.2E-05 39.0 10.6 90 180-287 160-254 (336)
489 TIGR02415 23BDH acetoin reduct 92.3 1.1 2.5E-05 38.7 9.3 79 184-265 2-87 (254)
490 PLN02657 3,8-divinyl protochlo 92.3 0.85 1.8E-05 42.7 8.8 39 178-218 56-95 (390)
491 PRK06046 alanine dehydrogenase 92.2 3.3 7.2E-05 37.7 12.4 95 180-289 127-226 (326)
492 PRK12769 putative oxidoreducta 92.2 0.59 1.3E-05 47.0 8.2 77 180-265 325-422 (654)
493 TIGR00507 aroE shikimate 5-deh 92.2 0.94 2E-05 40.0 8.6 112 179-305 114-232 (270)
494 PRK08278 short chain dehydroge 92.2 1.8 3.9E-05 38.2 10.5 82 181-265 5-100 (273)
495 KOG1207 Diacetyl reductase/L-x 92.1 0.61 1.3E-05 37.6 6.4 43 181-225 6-49 (245)
496 PRK13243 glyoxylate reductase; 92.1 1.5 3.3E-05 40.0 10.1 88 181-287 149-241 (333)
497 PRK00216 ubiE ubiquinone/menaq 92.1 2.6 5.6E-05 36.1 11.2 103 175-287 45-159 (239)
498 cd01075 NAD_bind_Leu_Phe_Val_D 92.1 0.57 1.2E-05 39.3 6.8 48 180-229 26-74 (200)
499 cd01484 E1-2_like Ubiquitin ac 92.1 0.6 1.3E-05 40.2 7.0 32 184-216 1-32 (234)
500 PF03446 NAD_binding_2: NAD bi 92.1 2.9 6.3E-05 33.7 10.7 87 184-287 3-95 (163)
No 1
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.6e-63 Score=422.80 Aligned_cols=346 Identities=53% Similarity=0.914 Sum_probs=317.2
Q ss_pred hhcceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868 15 EEVNMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93 (365)
Q Consensus 15 ~~~~~~~~~~~~~~l~~~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 93 (365)
..+|+++++.+++++++.++|.|++ .|+||+|++.++|||.+|++.+...+.+.+..+.|.++|||.+|+|+++|+.|+
T Consensus 2 ~~~~~A~vl~g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 2 AADNLALVLRGKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred CcccceeEEEccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 4578999999999999999999998 999999999999999999999998887777778999999999999999999999
Q ss_pred CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHH
Q 017868 94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA 173 (365)
Q Consensus 94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~ 173 (365)
++++||||+.-+..+|+.|++|++|++|+|+++.+...++.+|++++|++.++++|+++|+++|++++|++.++++++||
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ePLsV~~HA 161 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEPLSVGVHA 161 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccchhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~ 253 (365)
.+++++++|++|||+|+|++|+++.. .|+.+|+..|++++..+.|++++++||++.+....... +..+..+...+..+
T Consensus 162 cr~~~vk~Gs~vLV~GAGPIGl~t~l-~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~-~~~~~~~~v~~~~g 239 (354)
T KOG0024|consen 162 CRRAGVKKGSKVLVLGAGPIGLLTGL-VAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKS-SPQELAELVEKALG 239 (354)
T ss_pred hhhcCcccCCeEEEECCcHHHHHHHH-HHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccc-cHHHHHHHHHhhcc
Confidence 99999999999999999999999999 99999999999999999999999999999877654332 22222222222223
Q ss_pred -CCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCC-cHHHHHHHHHcCCCCCC
Q 017868 254 -TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN-TWPLCLELLRSGKIDVK 331 (365)
Q Consensus 254 -~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~l~~g~~~~~ 331 (365)
..+|++|||+|....++.++.+++.+|++++.++......++...+..|++++.|++.+.. ++..+++++++|+++++
T Consensus 240 ~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sGki~~k 319 (354)
T KOG0024|consen 240 KKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSGKIDVK 319 (354)
T ss_pred ccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcCCcCch
Confidence 5599999999999899999999999999999999888889999999999999999999955 99999999999999999
Q ss_pred CceEEEecCChhhHHHHHHHHhcCC-CceEEEEe
Q 017868 332 PLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFN 364 (365)
Q Consensus 332 ~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vi~ 364 (365)
+++++.|++ +++.+||+.+..++ ...|++++
T Consensus 320 ~lIT~r~~~--~~~~eAf~~~~~~~~~~iKv~i~ 351 (354)
T KOG0024|consen 320 PLITHRYKF--DDADEAFETLQHGEEGVIKVIIT 351 (354)
T ss_pred hheeccccc--chHHHHHHHHHhCcCCceEEEEe
Confidence 999999999 99999999988774 36788875
No 2
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=8.3e-61 Score=419.53 Aligned_cols=331 Identities=30% Similarity=0.490 Sum_probs=297.2
Q ss_pred hhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868 15 EEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93 (365)
Q Consensus 15 ~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 93 (365)
+.+|+|+++.+.+ ++++.+++.|+|+|+||+|+|.|+|+|++|++.++|.... ..+|+++|||.+|+|+++|++|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~---~~~P~ipGHEivG~V~~vG~~V~ 77 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPV---PKLPLIPGHEIVGTVVEVGEGVT 77 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCC---CCCCccCCcceEEEEEEecCCCc
Confidence 4679999999764 5999999999999999999999999999999999874332 45899999999999999999999
Q ss_pred CCCCCCEEEE-cCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHH
Q 017868 94 TLVPGDRVAL-EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL 171 (365)
Q Consensus 94 ~~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~ 171 (365)
+|++||||.+ +...+|++|+||+.++.++|++....+. +.+|+|+||+++++++++++|+++++++||.+. ...|+|
T Consensus 78 ~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy-~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y 156 (339)
T COG1064 78 GLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGY-TTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTY 156 (339)
T ss_pred cCCCCCEEEecCccCCCCCCccccCcccccCCCccccce-eecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEe
Confidence 9999999988 9999999999999999999999888777 488999999999999999999999999999885 677899
Q ss_pred HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868 172 HACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 172 ~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
++++..+++||++|+|.|+|++|++++| +|+.+|+ .|++++++++|.+++++||++++++.. +++..+.+++
T Consensus 157 ~alk~~~~~pG~~V~I~G~GGlGh~avQ-~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~--~~~~~~~~~~---- 228 (339)
T COG1064 157 RALKKANVKPGKWVAVVGAGGLGHMAVQ-YAKAMGA-EVIAITRSEEKLELAKKLGADHVINSS--DSDALEAVKE---- 228 (339)
T ss_pred eehhhcCCCCCCEEEEECCcHHHHHHHH-HHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcC--CchhhHHhHh----
Confidence 9999999999999999999999999999 9999997 799999999999999999999998843 4555454432
Q ss_pred hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC-CC-ccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCC
Q 017868 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKI 328 (365)
Q Consensus 252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~-~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~ 328 (365)
.+|++||+++ +..+..+++.|+++|+++.+|... .. ..++...+.++++++.|+... ..++++++++..+|.+
T Consensus 229 ---~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~I 304 (339)
T COG1064 229 ---IADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKI 304 (339)
T ss_pred ---hCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCc
Confidence 3999999999 889999999999999999999874 33 346677788999999999877 7789999999999999
Q ss_pred CCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 329 DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+|.+.+.+++ +++++||+.+++++..|+.||++
T Consensus 305 --kp~i~e~~~l--~~in~A~~~m~~g~v~gR~Vi~~ 337 (339)
T COG1064 305 --KPEILETIPL--DEINEAYERMEKGKVRGRAVIDM 337 (339)
T ss_pred --eeeEEeeECH--HHHHHHHHHHHcCCeeeEEEecC
Confidence 6666567888 99999999999999999999864
No 3
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1e-53 Score=392.04 Aligned_cols=338 Identities=30% Similarity=0.535 Sum_probs=291.8
Q ss_pred hhcceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868 15 EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (365)
Q Consensus 15 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (365)
...++++++.+++++++++++.| +.++||+|||.++++|++|++.+.+...+.....+|.++|||++|+|+++ ++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 2 QVKTQSCVVAGKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred cccceEEEEecCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 45688999999999999999997 68999999999999999999987543222223467999999999999999 7889
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC----CCCcceeeEEeecCCceEECCCCCCcchhccchhhHHH
Q 017868 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG 170 (365)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a 170 (365)
|++||||+..+..+|++|++|+.+.+++|++...++.. ..+|+|+||++++++.++++|+++++++++...++++|
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~a 158 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAEPLAVA 158 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHhhcHHHHH
Confidence 99999999999999999999999999999987766531 24799999999999999999999999887777788999
Q ss_pred HHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868 171 LHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 171 ~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
|++++.....+|++|||+|+|++|++++| +++.+|+++|++++++++|.++++++|++.++++.+ +++.+ +..
T Consensus 159 ~~al~~~~~~~g~~VlV~G~G~vG~~aiq-lak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~~~----~~~ 231 (343)
T PRK09880 159 IHAAHQAGDLQGKRVFVSGVGPIGCLIVA-AVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN--DDLDH----YKA 231 (343)
T ss_pred HHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc--ccHHH----Hhc
Confidence 99998777778999999999999999999 999999988899999999999999999999887643 33332 222
Q ss_pred HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCcHHHHHHHHHcCCCCC
Q 017868 251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDV 330 (365)
Q Consensus 251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~ 330 (365)
. .+++|++||++|.+..+..++++++++|+++.+|.......++...+..+++++.+++.+.+.++++++++++|.+.+
T Consensus 232 ~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i~~ 310 (343)
T PRK09880 232 E-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINP 310 (343)
T ss_pred c-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeeccccHHHHHHHHHcCCCCc
Confidence 1 246999999999877888999999999999999975544456666678899999998877788999999999999977
Q ss_pred CCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 331 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 331 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
.+.++++|++ +++.+|++.+.++...||+++++
T Consensus 311 ~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 311 LPLLSAEYPF--TDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred hhheEEEEEH--HHHHHHHHHHhcCCCceEEEEeC
Confidence 7788999999 99999999999888889999974
No 4
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=2.7e-53 Score=363.68 Aligned_cols=336 Identities=28% Similarity=0.455 Sum_probs=290.1
Q ss_pred cceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868 17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (365)
Q Consensus 17 ~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (365)
+++++++.++ ++|+++++++++|+++||+||+.++|+|.+|...+.|.++ ..+|.++|||++|+|++||++|+++
T Consensus 2 k~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p----~~~P~vLGHEgAGiVe~VG~gVt~v 77 (366)
T COG1062 2 KTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDP----EGFPAVLGHEGAGIVEAVGEGVTSV 77 (366)
T ss_pred CceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCceecccccccEEEEecCCcccc
Confidence 5788888865 7999999999999999999999999999999999987543 3489999999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc------------------CCCC--cceeeEEeecCCceEECCCC
Q 017868 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT------------------PPVH--GSLANQVVHPADLCFKLPDN 155 (365)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~--g~~~~~~~v~~~~~~~iP~~ 155 (365)
+|||+|+..+..+|++|.+|..+++++|......-. .+.. ++|+||..+++..++++++.
T Consensus 78 kpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~ 157 (366)
T COG1062 78 KPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPD 157 (366)
T ss_pred CCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCC
Confidence 999999999999999999999999999973322211 0122 49999999999999999999
Q ss_pred CCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 017868 156 VSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 233 (365)
Q Consensus 156 ~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~ 233 (365)
.+++.++++. ...|.+-++ +.+++++|++|.|.|.|++|++++| -|+..|+.++|+++.+++|++++++||++++++
T Consensus 158 ~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~-gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn 236 (366)
T COG1062 158 APLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQ-GAKAAGAGRIIAVDINPEKLELAKKFGATHFVN 236 (366)
T ss_pred CCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHH-HHHHcCCceEEEEeCCHHHHHHHHhcCCceeec
Confidence 9999999986 566777765 7799999999999999999999999 999999999999999999999999999999987
Q ss_pred CCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHh-hhcCcEEEeeccc
Q 017868 234 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPA-AVREVDVVGVFRY 312 (365)
Q Consensus 234 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~ 312 (365)
-.+.. +..+.+.+++ ++++|++|||+|....+.+++.++.++|+.+++|........+.+.+ ...+..++|++..
T Consensus 237 ~~~~~-~vv~~i~~~T---~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G 312 (366)
T COG1062 237 PKEVD-DVVEAIVELT---DGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFG 312 (366)
T ss_pred chhhh-hHHHHHHHhc---CCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEEEEeec
Confidence 43221 5777777664 56999999999999999999999999999999997766555555553 2234788888754
Q ss_pred ----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 313 ----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 313 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
+.++...++++.+|++.+.+++++.++| +|+++||+.+.+++.. |.||.
T Consensus 313 ~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~L--e~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 313 GARPRSDIPRLVDLYMAGKLPLDRLVTHTIPL--EDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred CCccccchhHHHHHHHcCCCchhHHhhccccH--HHHHHHHHHHhCCcee-eEEec
Confidence 6789999999999999999999999999 9999999999998554 66664
No 5
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=3.1e-51 Score=375.64 Aligned_cols=335 Identities=33% Similarity=0.573 Sum_probs=288.3
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (365)
|+|+++.+++.++++++|.|.++++||+|||.++++|++|++.+.+.+.. ...+|.++|||++|+|+++|++|++|++
T Consensus 1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 78 (339)
T cd08239 1 MRGAVFPGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVTHFRV 78 (339)
T ss_pred CeEEEEecCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCccCCC
Confidence 68889998899999999999999999999999999999999988764322 1235789999999999999999999999
Q ss_pred CCEEEEcCCcCCCCCccccCCCCCCCCCccc-cccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHH
Q 017868 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKF-FATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR 175 (365)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~ 175 (365)
||+|++.+..+|++|++|+.++++.|.+... .+. ..+|+|+||+.+++++++++|+++++++|+.++ ++.|||++++
T Consensus 79 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~-~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~ 157 (339)
T cd08239 79 GDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGW-NRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALR 157 (339)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCcCccccccc-CCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHH
Confidence 9999999999999999999999999987654 222 357999999999999999999999999998876 7889999998
Q ss_pred hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868 176 RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 255 (365)
Q Consensus 176 ~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 255 (365)
..++++|++|||+|+|++|++++| +++.+|++.+++++++++|.++++++|++.++++.. ++ .+.+.+.. .+.+
T Consensus 158 ~~~~~~g~~vlV~G~G~vG~~~~~-~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~--~~-~~~~~~~~--~~~~ 231 (339)
T cd08239 158 RVGVSGRDTVLVVGAGPVGLGALM-LARALGAEDVIGVDPSPERLELAKALGADFVINSGQ--DD-VQEIRELT--SGAG 231 (339)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc--ch-HHHHHHHh--CCCC
Confidence 888999999999999999999999 999999976888989999999999999998887543 33 44555443 2568
Q ss_pred ceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCcccc-chHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCc
Q 017868 256 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP-LTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPL 333 (365)
Q Consensus 256 ~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~-~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~ 333 (365)
+|++||++|+...+..++++++++|+++.+|..... .+. ...+..+++++.+++.. .+.+++++++++++.+.+.+.
T Consensus 232 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~ 310 (339)
T cd08239 232 ADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRL 310 (339)
T ss_pred CCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHe
Confidence 999999999887778899999999999999864432 222 23467789999998876 468999999999999977788
Q ss_pred eEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 334 VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 334 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
++++|++ +++.+|++.++++. .||+||++
T Consensus 311 i~~~~~l--~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 311 VTHRFGL--DQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred EEEEecH--HHHHHHHHHHHcCC-ceEEEEeC
Confidence 9999999 99999999998874 79999975
No 6
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=1.5e-50 Score=374.34 Aligned_cols=363 Identities=88% Similarity=1.396 Sum_probs=310.3
Q ss_pred CCCCCCCccccccchhcceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCcc
Q 017868 1 MGKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80 (365)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e 80 (365)
|||||||+++-.-.+..++++|+.++..+++.+.+.|++.++||+|||.++++|+.|+....+...+.+...+|.++|||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e 80 (364)
T PLN02702 1 MGKGGMSSGEGSGVEEENMAAWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHE 80 (364)
T ss_pred CCCCccccCCCcccccccceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccc
Confidence 89999999998888888999999999999999999999999999999999999999999887643332223457889999
Q ss_pred ceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcch
Q 017868 81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE 160 (365)
Q Consensus 81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~ 160 (365)
++|+|+++|+++++|++||+|++.+..+|++|++|..+..+.|+....++....+|+|++|+.+++..++++|+++++++
T Consensus 81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~ 160 (364)
T PLN02702 81 CAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEE 160 (364)
T ss_pred eeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHH
Confidence 99999999999999999999999999999999999999999998755444334479999999999999999999999999
Q ss_pred hccchhhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCccc
Q 017868 161 GAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD 240 (365)
Q Consensus 161 a~~~~~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~ 240 (365)
++...++++++++++..++.++++|||+|+|++|+++++ +++..|+++++++++++++.++++++|++.++++.....+
T Consensus 161 aa~~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~~~~-~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 239 (364)
T PLN02702 161 GAMCEPLSVGVHACRRANIGPETNVLVMGAGPIGLVTML-AARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIED 239 (364)
T ss_pred HhhhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCccccc
Confidence 886556667888887788999999999988999999999 9999999888889889999999999999988776544456
Q ss_pred HHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCcHHHHH
Q 017868 241 IAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCL 320 (365)
Q Consensus 241 ~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 320 (365)
+.+.+..+.+..+.++|++||++|....+...+++++++|+++.+|.......++......+++++.+.+.....+.+++
T Consensus 240 ~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 319 (364)
T PLN02702 240 VESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCL 319 (364)
T ss_pred HHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccChHHHHHHH
Confidence 76766655433456899999999976788999999999999999985433334455567888999999877667889999
Q ss_pred HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 321 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 321 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
++++++.+.+.+.+++.|+++++++++|++.+.+++..+|+++.
T Consensus 320 ~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 320 EFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred HHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 99999998655667788878778999999999988888999986
No 7
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.1e-51 Score=344.78 Aligned_cols=338 Identities=27% Similarity=0.406 Sum_probs=286.4
Q ss_pred ccchhcceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEe
Q 017868 12 EDGEEVNMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88 (365)
Q Consensus 12 ~~~~~~~~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v 88 (365)
+.-+.+++++....+ .++++..++.|+++++||+|+|+|+|+|.+|++.+.|.. ....+|.++|||.+|+|+++
T Consensus 4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdw---g~s~~PlV~GHEiaG~Vvkv 80 (360)
T KOG0023|consen 4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDW---GLSKYPLVPGHEIAGVVVKV 80 (360)
T ss_pred ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccC---CcccCCccCCceeeEEEEEE
Confidence 445677888888754 378889999999999999999999999999999998732 22688999999999999999
Q ss_pred CCCCCCCCCCCEE-EEcCCcCCCCCccccCCCCCCCCCcccccc------CCCCcceeeEEeecCCceEECCCCCCcchh
Q 017868 89 GSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFAT------PPVHGSLANQVVHPADLCFKLPDNVSLEEG 161 (365)
Q Consensus 89 G~~v~~~~~Gd~V-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a 161 (365)
|++|++|++|||| +.....+|+.|+||..+.+++|++.-+... ..+.|+|++|+++++.++++||++++.+.|
T Consensus 81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~a 160 (360)
T KOG0023|consen 81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASA 160 (360)
T ss_pred CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhc
Confidence 9999999999999 557888999999999999999995444322 334677999999999999999999999999
Q ss_pred ccch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHHcCCCEEEeCCCCcc
Q 017868 162 AMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD-YRLSVAKEIGADNIVKVSTNLQ 239 (365)
Q Consensus 162 ~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~~~~~~~~g~~~~~~~~~~~~ 239 (365)
|.+. ...|+|.++...++.||+++.|.|+|++|.+++| +|+++|. +|+++++++ +|.+.++.||++..++..+ ++
T Consensus 161 APlLCaGITvYspLk~~g~~pG~~vgI~GlGGLGh~aVq-~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~~-d~ 237 (360)
T KOG0023|consen 161 APLLCAGITVYSPLKRSGLGPGKWVGIVGLGGLGHMAVQ-YAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDSTE-DP 237 (360)
T ss_pred cchhhcceEEeehhHHcCCCCCcEEEEecCcccchHHHH-HHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEecC-CH
Confidence 9876 4557888899999999999999999779999999 9999999 578887776 7778889999999887532 34
Q ss_pred cHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHH
Q 017868 240 DIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPL 318 (365)
Q Consensus 240 ~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~ 318 (365)
++ ++++.++...++|-|.+. ....++.++..|+.+|+++++|.+.....++..++.++.+.|.|+... +.+.++
T Consensus 238 d~---~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E 312 (360)
T KOG0023|consen 238 DI---MKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQE 312 (360)
T ss_pred HH---HHHHHHhhcCcceeeeec--cccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHH
Confidence 54 444444456777777765 344778999999999999999998878888889999999999999866 788999
Q ss_pred HHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 319 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 319 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
++++..++.+ ++.+ +..++ +++++||+.+++++...+.|+++
T Consensus 313 ~Ldf~a~~~i--k~~I-E~v~~--~~v~~a~erm~kgdV~yRfVvD~ 354 (360)
T KOG0023|consen 313 ALDFVARGLI--KSPI-ELVKL--SEVNEAYERMEKGDVRYRFVVDV 354 (360)
T ss_pred HHHHHHcCCC--cCce-EEEeh--hHHHHHHHHHHhcCeeEEEEEEc
Confidence 9999999999 4444 55677 99999999999999999999874
No 8
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=5.9e-50 Score=370.88 Aligned_cols=334 Identities=31% Similarity=0.488 Sum_probs=285.4
Q ss_pred ceeEEEec---------CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEe
Q 017868 18 NMAAWLLG---------VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88 (365)
Q Consensus 18 ~~~~~~~~---------~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v 88 (365)
|||+++.. ++.++++++|.|+|+++||+|||.++++|++|++.+.|.. ...+|.++|||++|+|+++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~----~~~~p~i~GhE~~G~V~~v 76 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDR----PRPLPMALGHEAAGVVVEV 76 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCC----CCCCCccCCccceeEEEEe
Confidence 57777774 3679999999999999999999999999999999888743 2346899999999999999
Q ss_pred CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC--------------------CCCcceeeEEeecCCc
Q 017868 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP--------------------PVHGSLANQVVHPADL 148 (365)
Q Consensus 89 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~g~~~~~~~v~~~~ 148 (365)
|+++++|++||||++.+..+|++|++|+.+++++|......... ...|+|+||+.+++.+
T Consensus 77 G~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~ 156 (371)
T cd08281 77 GEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRS 156 (371)
T ss_pred CCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccc
Confidence 99999999999999988889999999999999999875332100 0137999999999999
Q ss_pred eEECCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc
Q 017868 149 CFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI 226 (365)
Q Consensus 149 ~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~ 226 (365)
++++|+++++++|+.++ ...+||+++ +.+++++|++|||.|+|++|++++| +++..|+++|++++++++|.++++++
T Consensus 157 ~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~-lak~~G~~~Vi~~~~~~~r~~~a~~~ 235 (371)
T cd08281 157 VVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALL-GAVAAGASQVVAVDLNEDKLALAREL 235 (371)
T ss_pred eEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCcEEEEcCCHHHHHHHHHc
Confidence 99999999999999886 678899886 5688999999999999999999999 99999997788999999999999999
Q ss_pred CCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC--CccccchHhhhcCc
Q 017868 227 GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAVREV 304 (365)
Q Consensus 227 g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~--~~~~~~~~~~~~~~ 304 (365)
|++.++++. .+++.+.+++.+ ++++|++|||+|....+..++++++++|+++.+|.... ...++...+..+++
T Consensus 236 Ga~~~i~~~--~~~~~~~i~~~~---~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~ 310 (371)
T cd08281 236 GATATVNAG--DPNAVEQVRELT---GGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEER 310 (371)
T ss_pred CCceEeCCC--chhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCC
Confidence 999887753 356666666653 34899999999987788999999999999999986532 23455556788999
Q ss_pred EEEeeccc----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868 305 DVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363 (365)
Q Consensus 305 ~i~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi 363 (365)
++.+++.. .+.+.++++++++|++.+.++++++|+| +++.+|++.+++++..+|+|+
T Consensus 311 ~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 311 TLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPL--DEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred EEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCCceeeeeC
Confidence 99998754 4678899999999999877788999999 999999999999988888764
No 9
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=7.3e-50 Score=371.23 Aligned_cols=343 Identities=25% Similarity=0.413 Sum_probs=286.7
Q ss_pred chhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868 14 GEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92 (365)
Q Consensus 14 ~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v 92 (365)
.+.+|+++++.+++ ++.++++|.|.|+++||+|||.++++|++|++.+.|.... ...+|.++|||++|+|+++|+++
T Consensus 7 ~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~--~~~~p~i~GhE~~G~V~~vG~~v 84 (381)
T PLN02740 7 KVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA--QRAYPRILGHEAAGIVESVGEGV 84 (381)
T ss_pred cceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcc--cCCCCccccccceEEEEEeCCCC
Confidence 45679999999875 5899999999999999999999999999999998875321 13568999999999999999999
Q ss_pred CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc-----------------------CCCCcceeeEEeecCCce
Q 017868 93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-----------------------PPVHGSLANQVVHPADLC 149 (365)
Q Consensus 93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~g~~~~~~~v~~~~~ 149 (365)
++|++||||++.+..+|++|++|..+.++.|.+....+. ....|+|+||++++++++
T Consensus 85 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~ 164 (381)
T PLN02740 85 EDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACV 164 (381)
T ss_pred CcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHe
Confidence 999999999999999999999999999999997643211 002589999999999999
Q ss_pred EECCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC
Q 017868 150 FKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG 227 (365)
Q Consensus 150 ~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g 227 (365)
+++|+++++++++.++ .+.+||+++ +.+++++|++|||+|+|++|++++| +++.+|+++|++++++++|.++++++|
T Consensus 165 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q-~ak~~G~~~Vi~~~~~~~r~~~a~~~G 243 (381)
T PLN02740 165 VKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAE-GARARGASKIIGVDINPEKFEKGKEMG 243 (381)
T ss_pred EECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHCCCCcEEEEcCChHHHHHHHHcC
Confidence 9999999999988776 678899886 5688999999999999999999999 999999977899999999999999999
Q ss_pred CCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCCCccccchHh-hhcCcE
Q 017868 228 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTPA-AVREVD 305 (365)
Q Consensus 228 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~~~~~~~~~~-~~~~~~ 305 (365)
++.++++...+.++.+.+++.+ ++++|++||++|....+..++.+++++ |+++.+|.......++.... ..++++
T Consensus 244 a~~~i~~~~~~~~~~~~v~~~~---~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~ 320 (381)
T PLN02740 244 ITDFINPKDSDKPVHERIREMT---GGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRS 320 (381)
T ss_pred CcEEEecccccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCe
Confidence 9988876543345666666654 338999999999877889999999886 99999986543222222222 346888
Q ss_pred EEeeccc----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 306 VVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 306 i~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+.|++.. ...+.++++++.++.+.+.+.++++|+| +++++|++.+.+++. .|++|.+
T Consensus 321 i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~e~~~A~~~~~~~~~-~k~~~~~ 381 (381)
T PLN02740 321 ITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF--EKINEAFQLLEDGKA-LRCLLHL 381 (381)
T ss_pred EEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecH--HHHHHHHHHHHCCCc-eeEEEeC
Confidence 8887543 2468899999999999777788999999 999999999988754 6999864
No 10
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=9.6e-50 Score=369.41 Aligned_cols=346 Identities=22% Similarity=0.387 Sum_probs=288.7
Q ss_pred CccccccchhcceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEE
Q 017868 7 SQGEKEDGEEVNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI 85 (365)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V 85 (365)
|+++.......|+++++.++. .++++++|.|+|+++||+|||.++++|++|++.+.+. ..+|.++|||++|+|
T Consensus 2 ~~~~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~------~~~p~i~GhE~~G~V 75 (378)
T PLN02827 2 SSSISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ------ALFPRIFGHEASGIV 75 (378)
T ss_pred CccccCcccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCC------CCCCeeecccceEEE
Confidence 345555566779999998764 7999999999999999999999999999999887653 145789999999999
Q ss_pred EEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc-------------C-------CCCcceeeEEeec
Q 017868 86 EKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-------------P-------PVHGSLANQVVHP 145 (365)
Q Consensus 86 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~-------~~~g~~~~~~~v~ 145 (365)
+++|+++++|++||||++.+..+|++|.+|+.+.+++|.+...... . ...|+|+||+.++
T Consensus 76 ~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~ 155 (378)
T PLN02827 76 ESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVH 155 (378)
T ss_pred EEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEec
Confidence 9999999999999999999889999999999999999987532110 0 0248999999999
Q ss_pred CCceEECCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH
Q 017868 146 ADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA 223 (365)
Q Consensus 146 ~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~ 223 (365)
+..++++|+++++++++.+. .+.++++++ +.+++++|++|||+|+|++|++++| +++.+|++.|++++++++|.+++
T Consensus 156 ~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iq-lak~~G~~~vi~~~~~~~~~~~a 234 (378)
T PLN02827 156 SGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQ-GAKLRGASQIIGVDINPEKAEKA 234 (378)
T ss_pred hhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEECCCHHHHHHH
Confidence 99999999999999888775 566788766 5578999999999999999999999 99999997788888899999999
Q ss_pred HHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCCCccccc-hHhhh
Q 017868 224 KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPL-TPAAV 301 (365)
Q Consensus 224 ~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~~~~~~~-~~~~~ 301 (365)
+++|++.++++....+++.+.+++.+ ++++|++||++|....+..+++.++++ |+++.+|.......+.. ..+..
T Consensus 235 ~~lGa~~~i~~~~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~ 311 (378)
T PLN02827 235 KTFGVTDFINPNDLSEPIQQVIKRMT---GGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFL 311 (378)
T ss_pred HHcCCcEEEcccccchHHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHh
Confidence 99999988875443345666666653 348999999999877888999999998 99999987543333333 34677
Q ss_pred cCcEEEeeccc----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 302 REVDVVGVFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 302 ~~~~i~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+++++.|++.. ...+.+++++++++.+.+.+.++++|+| +++.+|++.+++++. .|.||.+
T Consensus 312 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~vi~~ 376 (378)
T PLN02827 312 SGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSF--DEINKAFELMREGKC-LRCVIHM 376 (378)
T ss_pred cCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecH--HHHHHHHHHHHCCCc-eEEEEEe
Confidence 99999987653 3468899999999999666688999999 999999999998865 6999874
No 11
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=1.7e-49 Score=362.08 Aligned_cols=337 Identities=36% Similarity=0.594 Sum_probs=278.7
Q ss_pred ceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCc-ccCccceEEEEEeCCCCCCC
Q 017868 18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM-VIGHECAGVIEKVGSEVKTL 95 (365)
Q Consensus 18 ~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~ 95 (365)
|+++++..+. ..++++.+.|.+.|+||+|||.++|||.+|++.+.|.... ...|. ++|||++|+|+++| .++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~---~~~~~~i~GHE~~G~V~evG-~~~~~ 76 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPF---VPPGDIILGHEFVGEVVEVG-VVRGF 76 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCC---CCCCCcccCccceEEEEEec-cccCC
Confidence 5677777665 4448888888789999999999999999999999875322 23344 89999999999999 77889
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC----CCCcceeeEEeecCCceEE-CCCCCCcchhccchhhHHH
Q 017868 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP----PVHGSLANQVVHPADLCFK-LPDNVSLEEGAMCEPLSVG 170 (365)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~v~~~~~~~-iP~~~~~~~a~~~~~~~~a 170 (365)
++||||++.+..+|++|++|+.+.+++|++..+.+.. +.+|+|+||+++|.+++++ +|+++++++|++.++++++
T Consensus 77 ~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~epla~~ 156 (350)
T COG1063 77 KVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATA 156 (350)
T ss_pred CCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhcChhhhh
Confidence 9999999999999999999999999999976655542 2679999999999765555 5787788888888999999
Q ss_pred HHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEeCCCCcccHHHHHHHH
Q 017868 171 LHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKI 248 (365)
Q Consensus 171 ~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~i~~~ 248 (365)
+++. .....+++++|+|+|+|++|+++++ +++.+|+..|++++.+++|++++++ .+++.+.+... ++....+.+.
T Consensus 157 ~~~~a~~~~~~~~~~V~V~GaGpIGLla~~-~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~--~~~~~~~~~~ 233 (350)
T COG1063 157 YHGHAERAAVRPGGTVVVVGAGPIGLLAIA-LAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE--DDAGAEILEL 233 (350)
T ss_pred hhhhhhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc--ccHHHHHHHH
Confidence 8773 4444566669999999999999999 9999999999999999999999999 55555444221 2444455444
Q ss_pred HHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc-cccchHhhhcCcEEEeecc-c-CCcHHHHHHHHHc
Q 017868 249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFR-Y-KNTWPLCLELLRS 325 (365)
Q Consensus 249 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~-~~~~~~~~~~~~~i~~~~~-~-~~~~~~~~~~l~~ 325 (365)
+ .+.++|++|||+|....+.+++++++++|+++.+|...... .++...+..+++++.|+.. . ...++.+++++.+
T Consensus 234 t--~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~ 311 (350)
T COG1063 234 T--GGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLAS 311 (350)
T ss_pred h--CCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHc
Confidence 3 25689999999999888999999999999999999876655 4666778999999999965 3 5689999999999
Q ss_pred CCCCCCCceEEEecCChhhHHHHHHHHhcCCC-ceEEEEeC
Q 017868 326 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFNL 365 (365)
Q Consensus 326 g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~gk~vi~~ 365 (365)
|++++.+++++.+++ +++++||+.+.+... ..|+++.+
T Consensus 312 g~i~~~~lit~~~~~--~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 312 GKIDPEKLITHRLPL--DDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred CCCChhHceEeeccH--HHHHHHHHHHHhcCCCeEEEEecC
Confidence 999988888999887 999999999987533 67998864
No 12
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-49 Score=335.65 Aligned_cols=342 Identities=25% Similarity=0.391 Sum_probs=293.8
Q ss_pred chhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868 14 GEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92 (365)
Q Consensus 14 ~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v 92 (365)
...+.+|++.-++ .+|.++++..++|+.+||+||+.++++|.+|...+.|.. ....+|.++|||++|+|+++|.+|
T Consensus 4 kvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~---~~~~fP~IlGHEaaGIVESvGegV 80 (375)
T KOG0022|consen 4 KVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKD---PEGLFPVILGHEAAGIVESVGEGV 80 (375)
T ss_pred CceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCC---ccccCceEecccceeEEEEecCCc
Confidence 4567899998875 699999999999999999999999999999999998754 235789999999999999999999
Q ss_pred CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc---------------------CCCCcceeeEEeecCCceEE
Q 017868 93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT---------------------PPVHGSLANQVVHPADLCFK 151 (365)
Q Consensus 93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~g~~~~~~~v~~~~~~~ 151 (365)
+++++||+|++.+...|++|.+|+.+..|+|........ .....+|+||.+++...+++
T Consensus 81 ~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~k 160 (375)
T KOG0022|consen 81 TTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAK 160 (375)
T ss_pred cccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEe
Confidence 999999999999999999999999999999964443321 01124899999999999999
Q ss_pred CCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC
Q 017868 152 LPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD 229 (365)
Q Consensus 152 iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~ 229 (365)
|++..+++.++++. ..+|+|-|. +.+++++|+++.|+|.|++|+++++ -|+..|+.++|++|-+++|.+.+++||++
T Consensus 161 Id~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~-Gaka~GAsrIIgvDiN~~Kf~~ak~fGaT 239 (375)
T KOG0022|consen 161 IDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAM-GAKAAGASRIIGVDINPDKFEKAKEFGAT 239 (375)
T ss_pred cCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHH-hHHhcCcccEEEEecCHHHHHHHHhcCcc
Confidence 99999999999996 788899875 7899999999999999999999999 99999999999999999999999999999
Q ss_pred EEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCCCccccchHh-hhcCcEEE
Q 017868 230 NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTPA-AVREVDVV 307 (365)
Q Consensus 230 ~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~~~~~~~~~~-~~~~~~i~ 307 (365)
+.+|-.+......+.|++++ ++++|+.|||+|....+.+++.+...+ |..+.+|.......+..+++ .+++.++.
T Consensus 240 e~iNp~d~~~~i~evi~EmT---dgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~ 316 (375)
T KOG0022|consen 240 EFINPKDLKKPIQEVIIEMT---DGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWK 316 (375)
T ss_pred eecChhhccccHHHHHHHHh---cCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEE
Confidence 99875422223445555554 689999999999999999999999888 99999997765555555553 45566666
Q ss_pred eecc----cCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 308 GVFR----YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 308 ~~~~----~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
|+.. .+.++..+++.+.++++++...++|.++| +++++||+.|.+++.. +.|+.+
T Consensus 317 Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f--~~In~AF~ll~~Gksi-R~vl~~ 375 (375)
T KOG0022|consen 317 GSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPF--EEINKAFDLLHEGKSI-RCVLWM 375 (375)
T ss_pred EEecccccchhhhhHHHHHHHhCccchhhhhhcccCH--HHHHHHHHHHhCCceE-EEEEeC
Confidence 6543 37789999999999999999999999999 9999999999999665 777653
No 13
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=1e-48 Score=361.10 Aligned_cols=337 Identities=28% Similarity=0.469 Sum_probs=284.5
Q ss_pred cceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868 17 VNMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (365)
Q Consensus 17 ~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (365)
+||++++.+.+ +++++++|.|.|+++||+|||.++++|++|++...|... ..+|.++|||++|+|+++|+++++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~ 76 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN----DEFPFLLGHEAAGVVEAVGEGVTDV 76 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc----ccCCcccccceEEEEEEeCCCCccc
Confidence 58999999764 699999999999999999999999999999998876421 3468899999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--------cc----CCCCcceeeEEeecCCceEECCCCCCcchhcc
Q 017868 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--------AT----PPVHGSLANQVVHPADLCFKLPDNVSLEEGAM 163 (365)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~ 163 (365)
++||||++.+...|+.|.+|+.+++++|...... +. ....|+|+||+.+++++++++|+++++++|+.
T Consensus 77 ~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~ 156 (358)
T TIGR03451 77 APGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGL 156 (358)
T ss_pred CCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhh
Confidence 9999999999999999999999999999742110 00 01359999999999999999999999999888
Q ss_pred ch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccH
Q 017868 164 CE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 241 (365)
Q Consensus 164 ~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
++ .+.+||+++ +.+++++|++|||+|+|++|++++| +++..|+++|++++++++|.++++++|++.++++.+ +++
T Consensus 157 l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~-~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~ 233 (358)
T TIGR03451 157 LGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIA-GAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG--TDP 233 (358)
T ss_pred hcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC--cCH
Confidence 76 567788776 5678999999999999999999999 999999977899999999999999999998887543 566
Q ss_pred HHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC--ccccchHhhhcCcEEEeeccc----CCc
Q 017868 242 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFRY----KNT 315 (365)
Q Consensus 242 ~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~----~~~ 315 (365)
.+.+++.+. +.++|++|||+|.+..+..++.+++++|+++.+|..... ..++...+..+++++.+.+.. .+.
T Consensus 234 ~~~i~~~~~--~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 311 (358)
T TIGR03451 234 VEAIRALTG--GFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERD 311 (358)
T ss_pred HHHHHHHhC--CCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHH
Confidence 666666542 568999999999877889999999999999999865332 334445577788999887532 467
Q ss_pred HHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 316 WPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 316 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
++++++++++|.+.+.+.++++|++ +++.+|++.+++++.. |+++.+
T Consensus 312 ~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~~-k~~~~~ 358 (358)
T TIGR03451 312 FPMLVDLYLQGRLPLDAFVTERIGL--DDVEEAFDKMHAGDVL-RSVVEL 358 (358)
T ss_pred HHHHHHHHHcCCCCchheEEEEecH--HHHHHHHHHHhCCCcc-eeEEeC
Confidence 8899999999999777788999999 9999999999888665 777753
No 14
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=1.8e-48 Score=358.32 Aligned_cols=335 Identities=29% Similarity=0.525 Sum_probs=284.5
Q ss_pred ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (365)
||++++.+++.+++.++|.|+| .++||+|||.++++|++|+..+... +. ..+|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~~~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~--~~--~~~p~i~G~e~~G~V~~vG~~v~~~~ 76 (347)
T PRK10309 1 MKSVVNDTDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKN--GA--HYYPITLGHEFSGYVEAVGSGVDDLH 76 (347)
T ss_pred CceEEEeCCCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCC--CC--CCCCcccccceEEEEEEeCCCCCCCC
Confidence 5788888888999999999998 5999999999999999998754321 11 23578999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHh
Q 017868 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR 176 (365)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~ 176 (365)
+||||++.+..+|++|++|+.+.+++|......+. ...|+|+||+.++++.++++|+++++++|+.++++++++++++.
T Consensus 77 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~~~~~~~~~~~~ 155 (347)
T PRK10309 77 PGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGS-RRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIEPITVGLHAFHL 155 (347)
T ss_pred CCCEEEECCCcCCCCCcchhCcCcccCCCcceecc-CCCCccceeEEeehHHeEECcCCCCHHHhhhhhHHHHHHHHHHh
Confidence 99999999999999999999999999987665554 35799999999999999999999999999988667778888877
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868 177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 256 (365)
..+++|++|||+|+|++|++++| +++.+|+++++++++++++.++++++|++.++++++ .+ .+.+.+.+. +.++
T Consensus 156 ~~~~~g~~vlV~G~g~vG~~~~~-~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~-~~~~~~~~~--~~~~ 229 (347)
T PRK10309 156 AQGCEGKNVIIIGAGTIGLLAIQ-CAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE--MS-APQIQSVLR--ELRF 229 (347)
T ss_pred cCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc--cC-HHHHHHHhc--CCCC
Confidence 88899999999999999999999 999999977888889999999999999988877543 23 344554432 5678
Q ss_pred e-EEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCcccc---chHhhhcCcEEEeeccc------CCcHHHHHHHHHcC
Q 017868 257 D-VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVP---LTPAAVREVDVVGVFRY------KNTWPLCLELLRSG 326 (365)
Q Consensus 257 d-~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~---~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~g 326 (365)
| ++|||+|....+..++++++++|+++.+|.......++ ...+..+++++.+++.. .+.++++++++++|
T Consensus 230 d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g 309 (347)
T PRK10309 230 DQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTER 309 (347)
T ss_pred CeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcC
Confidence 8 99999998878899999999999999998654332222 23467788999987643 25688999999999
Q ss_pred CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 327 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
.+.+.+.++++|+| +++.+|++.+.++...||+|+++
T Consensus 310 ~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 310 KLSLEPLIAHRGSF--ESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred CCCchhheEEEeeH--HHHHHHHHHHhcCCcceEEEEeC
Confidence 99878889999999 99999999999988889999874
No 15
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=2.1e-48 Score=360.99 Aligned_cols=336 Identities=23% Similarity=0.428 Sum_probs=268.9
Q ss_pred ceeEEEecCCceEEEEecCCCCC-------CCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSLG-------PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGS 90 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~~-------~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~ 90 (365)
|+++++.++++++++++|.|+|+ ++||||||.++|||++|++.+.|.. ...+|.++|||++|+|+++|+
T Consensus 3 mka~v~~~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~----~~~~p~i~GhE~~G~V~~vG~ 78 (393)
T TIGR02819 3 NRGVVYLGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRT----TAPTGLVLGHEITGEVIEKGR 78 (393)
T ss_pred ceEEEEecCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCC----CCCCCccccceeEEEEEEEcC
Confidence 78899998889999999999874 6899999999999999999887642 235689999999999999999
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcc------ccccC---CCCcceeeEEeecCC--ceEECCCCCCc-
Q 017868 91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK------FFATP---PVHGSLANQVVHPAD--LCFKLPDNVSL- 158 (365)
Q Consensus 91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---~~~g~~~~~~~v~~~--~~~~iP~~~~~- 158 (365)
+|++|++||||++.+..+|++|++|+.+++++|.+.. +++.. ..+|+|+||+.+++. +++++|++++.
T Consensus 79 ~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~ 158 (393)
T TIGR02819 79 DVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQAL 158 (393)
T ss_pred ccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCccccc
Confidence 9999999999999999999999999999999999743 12221 236999999999964 79999998653
Q ss_pred ---chhcc-chhhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868 159 ---EEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 234 (365)
Q Consensus 159 ---~~a~~-~~~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~ 234 (365)
..++. ..++.++|++++..++++|++|||.|+|++|++++| +++.+|++++++++.+++|.++++++|++. +++
T Consensus 159 ~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G~G~iG~~aiq-lAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~-v~~ 236 (393)
T TIGR02819 159 EKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAA-SAQLLGAAVVIVGDLNPARLAQARSFGCET-VDL 236 (393)
T ss_pred ccccceeeeccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCceEEEeCCCHHHHHHHHHcCCeE-Eec
Confidence 23333 358889999998888999999999988999999999 999999987777778889999999999974 443
Q ss_pred CCCcccHHHHHHHHHHHhCCCceEEEeCCCCH--------------HHHHHHHHhcccCCEEEEEccCC-CCc-c-----
Q 017868 235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN--------------KTMSTALGATCAGGKVCLVGMGH-HEM-T----- 293 (365)
Q Consensus 235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~--------------~~~~~~~~~l~~~G~~~~~g~~~-~~~-~----- 293 (365)
. ...++.+.+.+++. +.++|++||++|.+ ..+..++++++++|+++.+|... ... .
T Consensus 237 ~-~~~~~~~~v~~~~~--~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~ 313 (393)
T TIGR02819 237 S-KDATLPEQIEQILG--EPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAA 313 (393)
T ss_pred C-CcccHHHHHHHHcC--CCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccc
Confidence 2 22456566665532 56899999999975 47899999999999999999752 111 1
Q ss_pred ------ccchHhhhcCcEEEeecccC-CcHHHHHHHHHcCCCCCCCceE-EEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 294 ------VPLTPAAVREVDVVGVFRYK-NTWPLCLELLRSGKIDVKPLVT-HRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 294 ------~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~l~~g~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+.....+.+++++.+..... +.+.++++++++|++++.++++ ++|+| +++.+||+.+.+++ .+|++|++
T Consensus 314 ~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l--~~~~~a~~~~~~~~-~~Kvvi~~ 390 (393)
T TIGR02819 314 KTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISL--DDAPEGYAEFDAGA-AKKFVIDP 390 (393)
T ss_pred cccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecH--HHHHHHHHHHhhCC-ceEEEEeC
Confidence 11222344556666543332 3347899999999997766666 78999 99999999998874 58999864
No 16
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=5.3e-48 Score=357.11 Aligned_cols=337 Identities=26% Similarity=0.405 Sum_probs=277.6
Q ss_pred ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (365)
Q Consensus 18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (365)
|+++++... ..++++++|.|+|.++||+|||.++++|++|++...|.... ..+|.++|||++|+|+++|+++++|+
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~---~~~p~i~GhE~~G~V~~vG~~v~~~~ 78 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE---GVFPVILGHEGAGIVEAVGEGVTSVK 78 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC---CCCCeeeccccEEEEEEECCCCccCC
Confidence 677777754 57999999999999999999999999999999988775321 35689999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc-----------------CCCCcceeeEEeecCCceEECCCCC
Q 017868 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPADLCFKLPDNV 156 (365)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~~~v~~~~~~~iP~~~ 156 (365)
+||||++.+..+|++|.+|+.+.+++|.+.... +. ....|+|+||+.+++++++++|+++
T Consensus 79 ~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l 158 (368)
T TIGR02818 79 VGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA 158 (368)
T ss_pred CCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence 999999999999999999999999999864310 00 0024799999999999999999999
Q ss_pred Ccchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868 157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 234 (365)
Q Consensus 157 ~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~ 234 (365)
++++++.++ ++.+||+++ +.+++++|++|||+|+|++|++++| +|+.+|+++|++++.+++|.++++++|++.++++
T Consensus 159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q-~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~ 237 (368)
T TIGR02818 159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQ-GARMAKASRIIAIDINPAKFELAKKLGATDCVNP 237 (368)
T ss_pred CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcc
Confidence 999999886 788999987 5688999999999999999999999 9999999778999999999999999999988875
Q ss_pred CCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCC--CccccchHhhhcCcEEEeecc
Q 017868 235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFR 311 (365)
Q Consensus 235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~--~~~~~~~~~~~~~~~i~~~~~ 311 (365)
.+..+++.+.+++++ ++++|++||++|.+..+..++++++++ |+++.+|.... ...+....+. +...+.++..
T Consensus 238 ~~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~ 313 (368)
T TIGR02818 238 NDYDKPIQEVIVEIT---DGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWRGSAF 313 (368)
T ss_pred cccchhHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEEEeec
Confidence 432345556666554 348999999999877888999999886 99999986432 2222222222 2344666543
Q ss_pred c----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 312 Y----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 312 ~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
. ...+.+++++++++.+.+.++++++|+| +++.+|++.++++. ..|++|++
T Consensus 314 ~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~~~~~A~~~~~~~~-~~k~~v~~ 368 (368)
T TIGR02818 314 GGVKGRTELPGIVEQYMKGEIALDDFVTHTMPL--EDINEAFDLMHEGK-SIRTVIHY 368 (368)
T ss_pred cCCCcHHHHHHHHHHHHCCCCCchhheeEEecH--HHHHHHHHHHhCCC-ceeEEeeC
Confidence 2 3468899999999999877889999999 99999999998774 47999874
No 17
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=9e-48 Score=356.34 Aligned_cols=338 Identities=25% Similarity=0.442 Sum_probs=281.1
Q ss_pred cceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868 17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (365)
Q Consensus 17 ~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (365)
+|+++++... ++++++++|.|+|+++||+|||.++++|++|++.+.|... ...+|.++|||++|+|+++|+++++|
T Consensus 2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~ 78 (369)
T cd08301 2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ---TPLFPRILGHEAAGIVESVGEGVTDL 78 (369)
T ss_pred ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC---CCCCCcccccccceEEEEeCCCCCcc
Confidence 6889998864 5799999999999999999999999999999998877532 23568899999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc--------------C----CCCcceeeEEeecCCceEECCC
Q 017868 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT--------------P----PVHGSLANQVVHPADLCFKLPD 154 (365)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--------------~----~~~g~~~~~~~v~~~~~~~iP~ 154 (365)
++||||++.+..+|++|.+|+.+.++.|.+.... +. . ...|+|+||+.+++.+++++|+
T Consensus 79 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~ 158 (369)
T cd08301 79 KPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINP 158 (369)
T ss_pred ccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCC
Confidence 9999999999999999999999999999875432 00 0 0248899999999999999999
Q ss_pred CCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 017868 155 NVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIV 232 (365)
Q Consensus 155 ~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~ 232 (365)
++++++++.++ .+.+||+++ +..++++|++|||+|+|++|++++| +++.+|+.+|+++++++++.++++++|++.++
T Consensus 159 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q-~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i 237 (369)
T cd08301 159 EAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAE-GARIRGASRIIGVDLNPSKFEQAKKFGVTEFV 237 (369)
T ss_pred CCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEcCCHHHHHHHHHcCCceEE
Confidence 99999988876 677888876 5688999999999999999999999 99999997789999999999999999998887
Q ss_pred eCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCCCccccchH-hhhcCcEEEeec
Q 017868 233 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHHEMTVPLTP-AAVREVDVVGVF 310 (365)
Q Consensus 233 ~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~~~~~~~~~-~~~~~~~i~~~~ 310 (365)
++....+++.+.+++.. ++++|++||++|....+..++.+++++ |+++.+|.......+.... ...+++++.+++
T Consensus 238 ~~~~~~~~~~~~v~~~~---~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 314 (369)
T cd08301 238 NPKDHDKPVQEVIAEMT---GGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTL 314 (369)
T ss_pred cccccchhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEe
Confidence 75432234555565553 348999999999877888999999996 9999998754322222222 234788998875
Q ss_pred cc----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 311 RY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 311 ~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
.. +..++++++++.++.+.+.+.++++|+| +++.+|++.+++++. .|++|.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~k~~~~ 369 (369)
T cd08301 315 FGGYKPKTDLPNLVEKYMKKELELEKFITHELPF--SEINKAFDLLLKGEC-LRCILH 369 (369)
T ss_pred cCCCChHHHHHHHHHHHHcCCCCcHHheeeeecH--HHHHHHHHHHHCCCc-eeEEeC
Confidence 43 3468899999999999777788899999 999999999998865 488873
No 18
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=4.1e-48 Score=348.31 Aligned_cols=310 Identities=32% Similarity=0.430 Sum_probs=258.6
Q ss_pred ceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868 18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (365)
Q Consensus 18 ~~~~~~~~---~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (365)
|+++++.. ++.+++.++|.|.|+++||+|||+++++||.|.....|. .....+.|.++|.|++|+|+++|++|+.
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~--~~~~~~~P~i~G~d~aG~V~avG~~V~~ 78 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGL--APPVRPLPFIPGSEAAGVVVAVGSGVTG 78 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCC--CCCCCCCCCcccceeEEEEEEeCCCCCC
Confidence 56777663 345999999999999999999999999999999999885 1222568999999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (365)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~ 173 (365)
|++||||+... .. ...|+|+||+.+++++++++|+++++++|++++ ...|||++
T Consensus 79 ~~~GdrV~~~~-~~------------------------~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~ 133 (326)
T COG0604 79 FKVGDRVAALG-GV------------------------GRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLA 133 (326)
T ss_pred cCCCCEEEEcc-CC------------------------CCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999998863 00 035999999999999999999999999999997 88899999
Q ss_pred HH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868 174 CR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 174 ~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
+. ..++++|++|||+|+ |++|++++| +++.+|+ .++++.+++++.++++++|++++++|.+ +++.+.+++++.
T Consensus 134 l~~~~~l~~g~~VLV~gaaGgVG~~aiQ-lAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~--~~~~~~v~~~t~- 208 (326)
T COG0604 134 LFDRAGLKPGETVLVHGAAGGVGSAAIQ-LAKALGA-TVVAVVSSSEKLELLKELGADHVINYRE--EDFVEQVRELTG- 208 (326)
T ss_pred HHHhcCCCCCCEEEEecCCchHHHHHHH-HHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCc--ccHHHHHHHHcC-
Confidence 85 588999999999986 999999999 9999998 4555556777777999999999999755 569999988864
Q ss_pred hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC--CCccccchHhhhcCcEEEeeccc-------CCcHHHHHHH
Q 017868 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLEL 322 (365)
Q Consensus 252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~ 322 (365)
+.++|+|+|++|.. .+..++.+|+++|+++.+|... ....++...+..+.+...+.... .+.+.++.++
T Consensus 209 -g~gvDvv~D~vG~~-~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~ 286 (326)
T COG0604 209 -GKGVDVVLDTVGGD-TFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDL 286 (326)
T ss_pred -CCCceEEEECCCHH-HHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHH
Confidence 67899999999975 8888999999999999998755 23344455567778888887655 2467789999
Q ss_pred HHcCCCCCCCceEEEecCChhhHHHHHHHHhc-CCCceEEEEeC
Q 017868 323 LRSGKIDVKPLVTHRFGFSQKEVEEAFETSAR-GGTAIKVMFNL 365 (365)
Q Consensus 323 l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~gk~vi~~ 365 (365)
+++|.+ ++.++++|+| ++...+..+... ++..||+|+++
T Consensus 287 ~~~g~l--~~~i~~~~~l--~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 287 LASGKL--KPVIDRVYPL--AEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred HHcCCC--cceeccEech--hhhHHHHHHHHcccCCcceEEEeC
Confidence 999999 7888889999 885555444333 58999999974
No 19
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=7.5e-48 Score=354.69 Aligned_cols=341 Identities=22% Similarity=0.344 Sum_probs=275.2
Q ss_pred CCccccccchhcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEE
Q 017868 6 MSQGEKEDGEEVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84 (365)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~ 84 (365)
|..+.+|.-++++++++..+. +.+++.+++.|.|+++||+|||.++++|++|++.+.|... ...+|.++|||++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~---~~~~p~i~GhE~~G~ 77 (360)
T PLN02586 1 MAKSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWG---FTRYPIVPGHEIVGI 77 (360)
T ss_pred CCCChhhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcC---CCCCCccCCcceeEE
Confidence 344455555666777777764 6799999999999999999999999999999998876432 135688999999999
Q ss_pred EEEeCCCCCCCCCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccc------cCCCCcceeeEEeecCCceEECCCCCC
Q 017868 85 IEKVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVS 157 (365)
Q Consensus 85 V~~vG~~v~~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~iP~~~~ 157 (365)
|+++|++|++|++||||++.+ ..+|++|++|+.+.+++|++..+.. ....+|+|+||+.+++++++++|++++
T Consensus 78 V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls 157 (360)
T PLN02586 78 VTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLP 157 (360)
T ss_pred EEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCC
Confidence 999999999999999998644 3579999999999999999765431 112469999999999999999999999
Q ss_pred cchhccch-hhHHHHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChh-HHHHHHHcCCCEEEeC
Q 017868 158 LEEGAMCE-PLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDY-RLSVAKEIGADNIVKV 234 (365)
Q Consensus 158 ~~~a~~~~-~~~~a~~~~~~-~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~-~~~~~~~~g~~~~~~~ 234 (365)
+++|+.++ ...|||+++.. ..+++|++|||.|+|++|++++| +++.+|++ +++++.+++ +.+.++++|++.+++.
T Consensus 158 ~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq-~Ak~~Ga~-vi~~~~~~~~~~~~~~~~Ga~~vi~~ 235 (360)
T PLN02586 158 LDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVK-IGKAFGLK-VTVISSSSNKEDEAINRLGADSFLVS 235 (360)
T ss_pred HHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHH-HHHHCCCE-EEEEeCCcchhhhHHHhCCCcEEEcC
Confidence 99998776 66788888854 55789999999999999999999 99999995 555555544 4567789999888764
Q ss_pred CCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-C
Q 017868 235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-K 313 (365)
Q Consensus 235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~ 313 (365)
.. . +.+++.. +++|++||++|....+..++++++++|+++.+|.......++...+..++..+.+++.. .
T Consensus 236 ~~--~---~~~~~~~----~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 306 (360)
T PLN02586 236 TD--P---EKMKAAI----GTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGI 306 (360)
T ss_pred CC--H---HHHHhhc----CCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCH
Confidence 32 1 2343331 36999999999877888999999999999999865444455556667788888887654 4
Q ss_pred CcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 314 NTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 314 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
..++++++++++|++. +.+ ++|+| +++.+|++.+.+++..||+|+++
T Consensus 307 ~~~~~~~~li~~g~i~--~~~-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 307 KETQEMLDFCAKHNIT--ADI-ELIRM--DEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred HHHHHHHHHHHhCCCC--CcE-EEEeH--HHHHHHHHHHHcCCCcEEEEEEc
Confidence 5789999999999994 444 57888 99999999999998889999874
No 20
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=3e-47 Score=352.42 Aligned_cols=337 Identities=26% Similarity=0.419 Sum_probs=276.9
Q ss_pred cceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868 17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (365)
Q Consensus 17 ~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (365)
+|+++++... ++++++++|.|.|.++||+|||.++++|++|+..+.|.... ..+|.++|||++|+|+++|+++++|
T Consensus 2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~~G~V~~vG~~v~~~ 78 (368)
T cd08300 2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE---GLFPVILGHEGAGIVESVGEGVTSV 78 (368)
T ss_pred cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc---CCCCceeccceeEEEEEeCCCCccC
Confidence 5788887754 68999999999999999999999999999999988775321 3568999999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---cc-----------------CCCCcceeeEEeecCCceEECCCC
Q 017868 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---AT-----------------PPVHGSLANQVVHPADLCFKLPDN 155 (365)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~~~v~~~~~~~iP~~ 155 (365)
++||||++.+..+|++|++|+.++++.|.+.... +. ....|+|+||+.++++.++++|++
T Consensus 79 ~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 158 (368)
T cd08300 79 KPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPE 158 (368)
T ss_pred CCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCC
Confidence 9999999999999999999999999999865321 00 002479999999999999999999
Q ss_pred CCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 017868 156 VSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 233 (365)
Q Consensus 156 ~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~ 233 (365)
+++++++.++ ++.+||+++ +.+++++|++|||+|+|++|++++| +++.+|+++|++++++++|.++++++|++.+++
T Consensus 159 l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~-~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~ 237 (368)
T cd08300 159 APLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQ-GAKAAGASRIIGIDINPDKFELAKKFGATDCVN 237 (368)
T ss_pred CChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEc
Confidence 9999988886 778999987 5688999999999999999999999 999999977899999999999999999999887
Q ss_pred CCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCC--CccccchHhhhcCcEEEeec
Q 017868 234 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH--EMTVPLTPAAVREVDVVGVF 310 (365)
Q Consensus 234 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~--~~~~~~~~~~~~~~~i~~~~ 310 (365)
+.+.++++.+.+++++ ++++|+|||++|....+..++++++++ |+++.+|.... ........+. +...+.+..
T Consensus 238 ~~~~~~~~~~~v~~~~---~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~ 313 (368)
T cd08300 238 PKDHDKPIQQVLVEMT---DGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTA 313 (368)
T ss_pred ccccchHHHHHHHHHh---CCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEE
Confidence 6543335666666654 348999999999877889999999886 99999986532 1122222222 334555543
Q ss_pred c----cCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 311 R----YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 311 ~----~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
. ....+.+++++++++.+.+.+.++++|+| +++.+|++.+.++.. .|+++.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 314 FGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPL--DEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred ecccCcHHHHHHHHHHHHcCCCChhhceeeeEcH--HHHHHHHHHHhCCCC-ceeeeC
Confidence 2 24578899999999999777788999999 999999999988754 688874
No 21
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=5.3e-47 Score=349.16 Aligned_cols=340 Identities=36% Similarity=0.621 Sum_probs=290.8
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccC-C-------ccCCCCcccCccceEEEEEeC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA-D-------FVVKEPMVIGHECAGVIEKVG 89 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~-~-------~~~~~p~~~G~e~~G~V~~vG 89 (365)
|+++++.+++.++++++|.|+|.++||+||+.++++|+.|+..+.+.... . ....+|.++|||++|+|+++|
T Consensus 1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG 80 (351)
T cd08233 1 MKAARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVG 80 (351)
T ss_pred CceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeC
Confidence 57888888889999999999999999999999999999998876542110 0 012368899999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHH
Q 017868 90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV 169 (365)
Q Consensus 90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~ 169 (365)
+++++|++||+|++.+..+|++|.+|+.+.+++|.+..+.+....+|+|+||+.++...++++|+++++++++.+.++.+
T Consensus 81 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~t 160 (351)
T cd08233 81 SGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAV 160 (351)
T ss_pred CCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhccHHHH
Confidence 99999999999999999999999999999999998776544333369999999999999999999999999887777889
Q ss_pred HHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHH
Q 017868 170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 249 (365)
Q Consensus 170 a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~ 249 (365)
||++++..++++|++|||+|+|.+|++++| +++..|++.++++++++++.++++++|++.++++. ..++.+.+++..
T Consensus 161 a~~~l~~~~~~~g~~vlI~g~g~vG~~a~q-~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~--~~~~~~~l~~~~ 237 (351)
T cd08233 161 AWHAVRRSGFKPGDTALVLGAGPIGLLTIL-ALKAAGASKIIVSEPSEARRELAEELGATIVLDPT--EVDVVAEVRKLT 237 (351)
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCC--ccCHHHHHHHHh
Confidence 999998788999999999998999999999 99999997788888899999999999999887754 356777776653
Q ss_pred HHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCC
Q 017868 250 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKI 328 (365)
Q Consensus 250 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~ 328 (365)
. +.++|++||++|....+..++++++++|+++.+|.......++...+..+++++.+.+.+ .+++++++++++++.+
T Consensus 238 ~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l 315 (351)
T cd08233 238 G--GGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLASGKI 315 (351)
T ss_pred C--CCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHHcCCC
Confidence 2 567999999999777889999999999999999875544455666678899999998766 6789999999999999
Q ss_pred CCCCceEEEecCChhhH-HHHHHHHhcCCCc-eEEEEe
Q 017868 329 DVKPLVTHRFGFSQKEV-EEAFETSARGGTA-IKVMFN 364 (365)
Q Consensus 329 ~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~~-gk~vi~ 364 (365)
.+.+.++++|++ +++ ++|++.+.+++.. +|+||.
T Consensus 316 ~~~~~i~~~~~l--~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 316 DAEPLITSRIPL--EDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred ChHHheEEEecH--HHHHHHHHHHHHhCCCCceEEEeC
Confidence 766778889988 996 7999999888764 999974
No 22
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=3.8e-47 Score=349.43 Aligned_cols=334 Identities=23% Similarity=0.434 Sum_probs=279.0
Q ss_pred EEEecCCc-eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCC
Q 017868 21 AWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99 (365)
Q Consensus 21 ~~~~~~~~-l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 99 (365)
.++.++++ ++++++|.|.++++||+|||.++++|++|++...+.... ...+|.++|||++|+|+++|++++.+ +||
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~--~~~~p~i~GhE~~G~V~~vG~~v~~~-~Gd 78 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRT--NHALPLALGHEISGRVIQAGAGAASW-IGK 78 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCc--cCCCCeeccccceEEEEEeCCCcCCC-CCC
Confidence 34555554 899999999999999999999999999999877443211 13568899999999999999999887 999
Q ss_pred EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCC------CCCcchhccch-hhHHHHH
Q 017868 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD------NVSLEEGAMCE-PLSVGLH 172 (365)
Q Consensus 100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~------~~~~~~a~~~~-~~~~a~~ 172 (365)
||++.+..+|++|.+|+.+++++|......+. ...|+|+||+.+++++++++|+ +++++.++.+. ++.++++
T Consensus 79 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~-~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~ 157 (349)
T TIGR03201 79 AVIVPAVIPCGECELCKTGRGTICRAQKMPGN-DMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQ 157 (349)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCccCc-CCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHH
Confidence 99999999999999999999999987665543 3469999999999999999999 88888877764 7889999
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCc-ccHHHHHHHHHHH
Q 017868 173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDIAEEVEKIQKA 251 (365)
Q Consensus 173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~i~~~~~~ 251 (365)
+++...+++|++|||+|+|++|++++| +++..|+ .+++++++++|.++++++|++.++++.+.+ +++.+.+++++.
T Consensus 158 a~~~~~~~~g~~VlV~G~G~vG~~a~~-~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~- 234 (349)
T TIGR03201 158 AAVQAGLKKGDLVIVIGAGGVGGYMVQ-TAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAK- 234 (349)
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcc-
Confidence 988788999999999999999999999 9999999 588888999999999999998887754321 245555655543
Q ss_pred hCCCce----EEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcC
Q 017868 252 MGTGID----VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG 326 (365)
Q Consensus 252 ~~~~~d----~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g 326 (365)
+.++| ++|||+|....+..++++++++|+++.+|.......++...++.+..++.+.+.. ..+++++++++++|
T Consensus 235 -~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g 313 (349)
T TIGR03201 235 -ARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDG 313 (349)
T ss_pred -cCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcC
Confidence 56776 8999999887888899999999999999875444445555666778888888754 56799999999999
Q ss_pred CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 327 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
.+.+.+.+ +.|+| +++++|++.++++...+|+++++
T Consensus 314 ~i~~~~~i-~~~~l--~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 314 KIQLGPFV-ERRPL--DQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred CCCcccce-EEecH--HHHHHHHHHHHcCCccceEEecC
Confidence 99766666 46888 99999999999998899999864
No 23
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=5.2e-47 Score=349.40 Aligned_cols=331 Identities=27% Similarity=0.398 Sum_probs=265.0
Q ss_pred ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (365)
Q Consensus 18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (365)
|+++++..+ ..+++.++|.|+|+++||+|||.++++|++|++.+.|.+.......+|.++|||++|+|+++|++ ++|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 467777643 34999999999999999999999999999999999875422111245789999999999999999 9999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc--ccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHH
Q 017868 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF--ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC 174 (365)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~ 174 (365)
+||||++.+..+|++|.+|..+++++|+..... +....+|+|+||+.++++.++++|++++ +.++...+++++++++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~a~~~~p~~~~~~a~ 158 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DVGVLLEPLSVVEKAI 158 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cceeecchHHHHHHHH
Confidence 999999998889999999999999999875443 2223569999999999999999999999 5555555666655544
Q ss_pred H-------hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeC---ChhHHHHHHHcCCCEEEeCCCCcccHHHH
Q 017868 175 R-------RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDV---DDYRLSVAKEIGADNIVKVSTNLQDIAEE 244 (365)
Q Consensus 175 ~-------~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 244 (365)
. ..++++|++|||+|+|++|++++| +++..|+ .++++++ +++|.++++++|++. +++.. +++.+
T Consensus 159 ~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q-~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~--~~~~~- 232 (355)
T cd08230 159 EQAEAVQKRLPTWNPRRALVLGAGPIGLLAAL-LLRLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSK--TPVAE- 232 (355)
T ss_pred HHHhhhhhhcccCCCCEEEEECCCHHHHHHHH-HHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCc--cchhh-
Confidence 2 123678999999999999999999 9999999 5777776 688999999999986 44322 33332
Q ss_pred HHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC--Ccccc----chHhhhcCcEEEeeccc-CCcHH
Q 017868 245 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVP----LTPAAVREVDVVGVFRY-KNTWP 317 (365)
Q Consensus 245 i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~--~~~~~----~~~~~~~~~~i~~~~~~-~~~~~ 317 (365)
.+ ...++|+|||++|....+..++++++++|+++.+|.... ...++ ...+..+++++.|++.. .++++
T Consensus 233 ~~-----~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~ 307 (355)
T cd08230 233 VK-----LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFE 307 (355)
T ss_pred hh-----hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHH
Confidence 11 146899999999987788999999999999999986544 22333 34567899999998765 56789
Q ss_pred HHHHHHHcCCC----CCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 318 LCLELLRSGKI----DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 318 ~~~~~l~~g~~----~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
++++++.++.+ .+.+.++++|++ +++.+|++.++++. +|+||++
T Consensus 308 ~~~~~l~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 308 QAVEDLAQWKYRWPGVLERLITRRVPL--EEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred HHHHHHHhcccccccchHHheeeeecH--HHHHHHHHhcccCC--eEEEeeC
Confidence 99999998872 246778899999 99999999887653 6999975
No 24
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=1e-46 Score=348.49 Aligned_cols=336 Identities=26% Similarity=0.455 Sum_probs=281.0
Q ss_pred cceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868 17 VNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (365)
Q Consensus 17 ~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (365)
+++++++.+. ++++++++|.|.+.++||+|||.++++|++|++...|... ..+|.++|||++|+|+++|++++++
T Consensus 2 ~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~ 77 (365)
T cd08277 2 KCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA----TLFPVILGHEGAGIVESVGEGVTNL 77 (365)
T ss_pred ccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC----CCCCeecccceeEEEEeeCCCCccC
Confidence 5788888864 5699999999999999999999999999999998876432 3568899999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc-------------------CCCCcceeeEEeecCCceEECCCCC
Q 017868 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-------------------PPVHGSLANQVVHPADLCFKLPDNV 156 (365)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~g~~~~~~~v~~~~~~~iP~~~ 156 (365)
++||||++.+..+|++|.+|..+.+++|++...... ....|+|+||+.+++++++++|+++
T Consensus 78 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l 157 (365)
T cd08277 78 KPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA 157 (365)
T ss_pred CCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCC
Confidence 999999999999999999999999999987543211 0124899999999999999999999
Q ss_pred Ccchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868 157 SLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 234 (365)
Q Consensus 157 ~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~ 234 (365)
++++++.++ ++.+||+++ +.+++++|++|||+|+|++|+++++ +++.+|+.+|++++++++|.++++++|++.+++.
T Consensus 158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~-~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~ 236 (365)
T cd08277 158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIM-GAKIAGASRIIGVDINEDKFEKAKEFGATDFINP 236 (365)
T ss_pred CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecc
Confidence 999999886 788999886 5688999999999999999999999 9999999778999999999999999999888775
Q ss_pred CCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccC-CEEEEEccCCC-CccccchHhhhcCcEEEeeccc
Q 017868 235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAG-GKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY 312 (365)
Q Consensus 235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~ 312 (365)
.+.+.++.+.+++.+ ++++|++||++|....+..++++++++ |+++.+|.... ...++...+.. +.++.+++..
T Consensus 237 ~~~~~~~~~~~~~~~---~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~ 312 (365)
T cd08277 237 KDSDKPVSEVIREMT---GGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFG 312 (365)
T ss_pred ccccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecC
Confidence 443334555565543 368999999999877888999999875 99999986532 22333334443 7888887653
Q ss_pred ----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 313 ----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 313 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
...+.+++++++++.+.+.+.++++|+| +++.+|++.+++++ ..|++++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~k~~i~ 365 (365)
T cd08277 313 GFKSRSDVPKLVSKYMNKKFDLDELITHVLPF--EEINKGFDLMKSGE-CIRTVIT 365 (365)
T ss_pred CCChHHHHHHHHHHHHCCCcChhHheeeEEch--hhHHHHHHHHHCCC-CceEeeC
Confidence 3468899999999998778889999999 99999999998886 5698874
No 25
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.7e-46 Score=346.60 Aligned_cols=327 Identities=20% Similarity=0.327 Sum_probs=266.9
Q ss_pred eEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCC
Q 017868 20 AAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPG 98 (365)
Q Consensus 20 ~~~~~~-~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 98 (365)
+++..+ ++.+++.+++.|+|+++||+|||.++++|++|++.+.|... ...+|.++|||++|+|+++|+++++|++|
T Consensus 9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~---~~~~p~i~GhE~aG~Vv~vG~~v~~~~vG 85 (375)
T PLN02178 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWG---FSRYPIIPGHEIVGIATKVGKNVTKFKEG 85 (375)
T ss_pred EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCC---CCCCCcccCceeeEEEEEECCCCCccCCC
Confidence 333444 36788899999999999999999999999999998876431 12458899999999999999999999999
Q ss_pred CEEEEcCCc-CCCCCccccCCCCCCCCCccccc------cCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHH
Q 017868 99 DRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG 170 (365)
Q Consensus 99 d~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a 170 (365)
|||++.+.. +|++|++|+.+++++|++..+.. .....|+|+||+.+++++++++|+++++++|+.++ ...|+
T Consensus 86 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta 165 (375)
T PLN02178 86 DRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITV 165 (375)
T ss_pred CEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHH
Confidence 999865544 69999999999999999764321 11236999999999999999999999999988776 66788
Q ss_pred HHHHHhcC--CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 017868 171 LHACRRAN--IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD-YRLSVAKEIGADNIVKVSTNLQDIAEEVEK 247 (365)
Q Consensus 171 ~~~~~~~~--~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~ 247 (365)
|+++.... .++|++|+|.|+|++|++++| +|+.+|++ +++++.++ ++.++++++|++.++++.+ .+.+++
T Consensus 166 ~~al~~~~~~~~~g~~VlV~G~G~vG~~avq-~Ak~~Ga~-Vi~~~~~~~~~~~~a~~lGa~~~i~~~~-----~~~v~~ 238 (375)
T PLN02178 166 YSPMKYYGMTKESGKRLGVNGLGGLGHIAVK-IGKAFGLR-VTVISRSSEKEREAIDRLGADSFLVTTD-----SQKMKE 238 (375)
T ss_pred HHHHHHhCCCCCCCCEEEEEcccHHHHHHHH-HHHHcCCe-EEEEeCChHHhHHHHHhCCCcEEEcCcC-----HHHHHH
Confidence 88885543 368999999999999999999 99999995 66665554 4578889999998876432 123443
Q ss_pred HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcC
Q 017868 248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG 326 (365)
Q Consensus 248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g 326 (365)
. . .++|++||++|....+..++++++++|+++.+|.......++...+..+++++.|++.. .+.+.++++++++|
T Consensus 239 ~---~-~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g 314 (375)
T PLN02178 239 A---V-GTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKH 314 (375)
T ss_pred h---h-CCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhC
Confidence 3 2 37999999999876788999999999999999875444455666677899999998765 46789999999999
Q ss_pred CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 327 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
++. +.+ +.|+| +++.+|++.+++++..||+|+++
T Consensus 315 ~i~--~~i-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 315 KIV--SDI-ELIKM--SDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred CCc--ccE-EEEeH--HHHHHHHHHHHcCCCceEEEEEe
Confidence 994 444 67888 99999999999998889999864
No 26
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=6.1e-46 Score=338.05 Aligned_cols=312 Identities=22% Similarity=0.302 Sum_probs=266.9
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCC
Q 017868 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG 106 (365)
Q Consensus 27 ~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 106 (365)
..++++++|.|.|+++||+|||.++++|++|++...|.+.. ..+|.++|||++|+|+++|+++++|++||||++.+.
T Consensus 13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 89 (329)
T TIGR02822 13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV---HRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWL 89 (329)
T ss_pred CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC---CCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCc
Confidence 46899999999999999999999999999999988875321 234789999999999999999999999999987543
Q ss_pred -cCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHHhcCCCCCCE
Q 017868 107 -ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETN 184 (365)
Q Consensus 107 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~~~~~~~g~~ 184 (365)
.+|+.|.+|..+.+++|+.....+. ..+|+|+||+.+++.+++++|+++++++++.++ .+.|||++++.+++++|++
T Consensus 90 ~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~ 168 (329)
T TIGR02822 90 RRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLRASLPPGGR 168 (329)
T ss_pred cCcCCCChHHhCcCcccCCCcccCCc-ccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHhcCCCCCCE
Confidence 4799999999999999998776654 357999999999999999999999999988765 7889999998888999999
Q ss_pred EEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCC
Q 017868 185 VLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 264 (365)
Q Consensus 185 vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g 264 (365)
|||+|+|++|++++| +++..|+ .+++++++++|.++++++|++++++.... ...++|+++++.+
T Consensus 169 VlV~G~g~iG~~a~~-~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~--------------~~~~~d~~i~~~~ 232 (329)
T TIGR02822 169 LGLYGFGGSAHLTAQ-VALAQGA-TVHVMTRGAAARRLALALGAASAGGAYDT--------------PPEPLDAAILFAP 232 (329)
T ss_pred EEEEcCCHHHHHHHH-HHHHCCC-eEEEEeCChHHHHHHHHhCCceecccccc--------------CcccceEEEECCC
Confidence 999999999999999 9999999 58888899999999999999988763210 0246899999888
Q ss_pred CHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCceEEEecCCh
Q 017868 265 LNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQ 342 (365)
Q Consensus 265 ~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~ 342 (365)
....+..++++++++|+++.+|.... ...++...+..+++++.+++.. ...+.+++++++++++. +++++|+|
T Consensus 233 ~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~---~i~~~~~l-- 307 (329)
T TIGR02822 233 AGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVR---VTTHTYPL-- 307 (329)
T ss_pred cHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCe---eEEEEEeH--
Confidence 77789999999999999999986432 2244455567788999987655 45688899999999983 35788988
Q ss_pred hhHHHHHHHHhcCCCceEEEE
Q 017868 343 KEVEEAFETSARGGTAIKVMF 363 (365)
Q Consensus 343 ~~~~~a~~~~~~~~~~gk~vi 363 (365)
+++++|++.+.+++..||+||
T Consensus 308 ~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 308 SEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred HHHHHHHHHHHcCCCceEEEe
Confidence 999999999999999999987
No 27
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=4.1e-46 Score=341.00 Aligned_cols=325 Identities=23% Similarity=0.331 Sum_probs=259.4
Q ss_pred cceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCc-cCCCCcccCccceEEEEEeCCCCCCC
Q 017868 17 VNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGVIEKVGSEVKTL 95 (365)
Q Consensus 17 ~~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (365)
..+++++.+++.++++++|.|+ +++||+|||.++|||++|++.+.|.+.... ...+|.++|||++|+|+++|.+ +|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~ 78 (341)
T cd08237 2 INQVYRLVRPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TY 78 (341)
T ss_pred cccceEEeccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--cc
Confidence 4688899999999999999995 999999999999999999999887542211 1357999999999999998764 69
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHH
Q 017868 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACR 175 (365)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~ 175 (365)
++||||++.+..+|+ |..|. ..++|.+..+.+. ..+|+|+||+++++++++++|+++++++|+++.+++++++++.
T Consensus 79 ~vGdrV~~~~~~~~~-~~~~~--~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~~~~~a~~a~~ 154 (341)
T cd08237 79 KVGTKVVMVPNTPVE-KDEII--PENYLPSSRFRSS-GYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTELVSVGVHAIS 154 (341)
T ss_pred CCCCEEEECCCCCch-hcccc--hhccCCCcceeEe-cCCCceEEEEEEchHHeEECCCCCChHHhhhhchHHHHHHHHH
Confidence 999999998887777 44553 4577877655543 3469999999999999999999999999988889999999884
Q ss_pred h---cCCCCCCEEEEEcCCHHHHHHHHHHHHH-CCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868 176 R---ANIGPETNVLIMGAGPIGLVTMLGAPRA-FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 176 ~---~~~~~g~~vlI~G~g~~G~~ai~~l~~~-~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
. ..+++|++|||.|+|++|++++| +++. .|..+|++++++++|++++++++++..++ + +.+
T Consensus 155 ~~~~~~~~~g~~VlV~G~G~vGl~~~~-~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~------~-------~~~- 219 (341)
T cd08237 155 RFEQIAHKDRNVIGVWGDGNLGYITAL-LLKQIYPESKLVVFGKHQEKLDLFSFADETYLID------D-------IPE- 219 (341)
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHH-HHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh------h-------hhh-
Confidence 3 45789999999999999999999 6664 67667888899999999998766543211 1 111
Q ss_pred hCCCceEEEeCCC---CHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcC-
Q 017868 252 MGTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG- 326 (365)
Q Consensus 252 ~~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g- 326 (365)
..++|+|||++| .+..+..++++++++|+++.+|.......++...++.+++++.++... .+++++++++++++
T Consensus 220 -~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~ 298 (341)
T cd08237 220 -DLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNP 298 (341)
T ss_pred -ccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCC
Confidence 246999999999 456788999999999999999875444455556678899999998765 46789999999999
Q ss_pred --CCCCCCceEEEecCC-hhhHHHHHHHHhcCCCceEEEEeC
Q 017868 327 --KIDVKPLVTHRFGFS-QKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 327 --~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
...+.+.++++|+++ ++++.+|++...++ ..||+||++
T Consensus 299 ~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~ 339 (341)
T cd08237 299 EVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEW 339 (341)
T ss_pred cccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence 234578888999872 24566666665554 789999874
No 28
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=7.2e-46 Score=303.47 Aligned_cols=310 Identities=27% Similarity=0.368 Sum_probs=266.2
Q ss_pred cchhcceeEEEe---cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeC
Q 017868 13 DGEEVNMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG 89 (365)
Q Consensus 13 ~~~~~~~~~~~~---~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG 89 (365)
..++..+.++++ +.+.+++++.|.|+|.|+|++||-.|+|+|+.|.-..+|.+. +...|++||.|++|+|+++|
T Consensus 4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~---~~plPytpGmEaaGvVvAvG 80 (336)
T KOG1197|consen 4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD---PAPLPYTPGMEAAGVVVAVG 80 (336)
T ss_pred CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC---CCCCCcCCCcccceEEEEec
Confidence 345667777777 357999999999999999999999999999999998888753 35779999999999999999
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhH
Q 017868 90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLS 168 (365)
Q Consensus 90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~ 168 (365)
++|+++++||||+.. +..|.|+|+..+|...++++|+.+++++|+.+. -..
T Consensus 81 ~gvtdrkvGDrVayl----------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~l 132 (336)
T KOG1197|consen 81 EGVTDRKVGDRVAYL----------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGL 132 (336)
T ss_pred CCccccccccEEEEe----------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHHHHH
Confidence 999999999999875 356999999999999999999999999988775 788
Q ss_pred HHHHHHH-hcCCCCCCEEEEEc-CCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHH
Q 017868 169 VGLHACR-RANIGPETNVLIMG-AGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVE 246 (365)
Q Consensus 169 ~a~~~~~-~~~~~~g~~vlI~G-~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~ 246 (365)
|||..++ ..++++|++|||+. +|++|++++| +++..|+ ++|++.++.+|++.+++.|+.+.|+++. +|+.++++
T Consensus 133 TAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Q-l~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~--eD~v~~V~ 208 (336)
T KOG1197|consen 133 TAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQ-LLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYST--EDYVDEVK 208 (336)
T ss_pred HHHHHHHHhcCCCCCCEEEEEeccccHHHHHHH-HHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccc--hhHHHHHH
Confidence 8998875 57899999999996 4999999999 9999999 7888889999999999999999999754 89999999
Q ss_pred HHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc-cccchHhhhcCcEEEeec--cc---CC----cH
Q 017868 247 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVF--RY---KN----TW 316 (365)
Q Consensus 247 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~-~~~~~~~~~~~~~i~~~~--~~---~~----~~ 316 (365)
+++. ++|+|+++|.+|. +.+...+.+|++.|.++.+|+.+... ++++..++.+.+++..-. .+ .. ..
T Consensus 209 kiTn--gKGVd~vyDsvG~-dt~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v 285 (336)
T KOG1197|consen 209 KITN--GKGVDAVYDSVGK-DTFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYV 285 (336)
T ss_pred hccC--CCCceeeeccccc-hhhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHH
Confidence 8865 8999999999996 48999999999999999999765533 455555666655544322 22 11 34
Q ss_pred HHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 317 ~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
.+.+.++.+|.+ ++.+.|+||| +++.+|+.++++....||+++.
T Consensus 286 ~rl~alvnsg~l--k~~I~~~ypl--s~vadA~~diesrktvGkvlLl 329 (336)
T KOG1197|consen 286 ARLFALVNSGHL--KIHIDHVYPL--SKVADAHADIESRKTVGKVLLL 329 (336)
T ss_pred HHHHHHhhcCcc--ceeeeeecch--HHHHHHHHHHHhhhccceEEEe
Confidence 567778888988 8889999999 9999999999999999999985
No 29
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.5e-44 Score=332.79 Aligned_cols=331 Identities=20% Similarity=0.301 Sum_probs=270.3
Q ss_pred hcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868 16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (365)
Q Consensus 16 ~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (365)
..+++++...+ +++++.+++.|+++++||+|||.++++|++|+..+.|.... ..+|.++|||++|+|+++|+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~E~~G~Vv~vG~~v~~ 84 (357)
T PLN02514 8 KKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM---SNYPMVPGHEVVGEVVEVGSDVSK 84 (357)
T ss_pred ceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc---CCCCccCCceeeEEEEEECCCccc
Confidence 34778888876 58999999999999999999999999999999988764321 246889999999999999999999
Q ss_pred CCCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccc------cCCCCcceeeEEeecCCceEECCCCCCcchhccch-h
Q 017868 95 LVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-P 166 (365)
Q Consensus 95 ~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~ 166 (365)
|++||+|++.+ ...|++|.+|..+.+++|....+.. ....+|+|+||+.++...++++|+++++++|+.++ .
T Consensus 85 ~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~ 164 (357)
T PLN02514 85 FTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCA 164 (357)
T ss_pred ccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhh
Confidence 99999998644 3469999999999999998753321 11246999999999999999999999999988776 6
Q ss_pred hHHHHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHH
Q 017868 167 LSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEE 244 (365)
Q Consensus 167 ~~~a~~~~~~-~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~ 244 (365)
+.+||+++.. ...++|++++|+|+|++|++++| +++..|++ +++++.++++.+ .++++|++.+++..+ . +.
T Consensus 165 ~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~-~Ak~~G~~-vi~~~~~~~~~~~~~~~~Ga~~~i~~~~--~---~~ 237 (357)
T PLN02514 165 GVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVK-IAKAMGHH-VTVISSSDKKREEALEHLGADDYLVSSD--A---AE 237 (357)
T ss_pred HHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHH-HHHHCCCe-EEEEeCCHHHHHHHHHhcCCcEEecCCC--h---HH
Confidence 7889998854 45679999999988999999999 99999995 565666666554 557799987665322 1 23
Q ss_pred HHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHH
Q 017868 245 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELL 323 (365)
Q Consensus 245 i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l 323 (365)
+++. ..++|++||++|....+..++++++++|+++.+|.......+....+..+++++.+++.. ..+++++++++
T Consensus 238 ~~~~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~ 313 (357)
T PLN02514 238 MQEA----ADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFC 313 (357)
T ss_pred HHHh----cCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHH
Confidence 3332 247999999999777888999999999999999875444455566678899999998765 45789999999
Q ss_pred HcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 324 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 324 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
++|.+ ++.+ ++|++ +++.+|++.+.++...||+++.+
T Consensus 314 ~~g~l--~~~i-~~~~l--~~~~~A~~~~~~~~~~gk~v~~~ 350 (357)
T PLN02514 314 KEKGL--TSMI-EVVKM--DYVNTAFERLEKNDVRYRFVVDV 350 (357)
T ss_pred HhCCC--cCcE-EEEcH--HHHHHHHHHHHcCCCceeEEEEc
Confidence 99987 5555 57888 99999999999998889999864
No 30
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=3.9e-44 Score=328.67 Aligned_cols=335 Identities=28% Similarity=0.475 Sum_probs=280.1
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (365)
|+++++.+++.+++.++|.|.|.++||+||+.++++|++|+....|.... ..+|.++|||++|+|+++|++++++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~ 77 (339)
T PRK10083 1 MKSIVIEKPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF---AKYPRVIGHEFFGVIDAVGEGVDAARI 77 (339)
T ss_pred CeEEEEecCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc---CCCCcccccceEEEEEEECCCCccCCC
Confidence 57888888899999999999999999999999999999999888764321 245889999999999999999999999
Q ss_pred CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhc
Q 017868 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177 (365)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~ 177 (365)
||+|+..+..+|+.|.+|..+++++|.+....+. ...|+|+||+.++...++++|++++++.++...++.+++++++..
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~~~~~~~~a~~~~~~~ 156 (339)
T PRK10083 78 GERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGV-HRDGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANVTGRT 156 (339)
T ss_pred CCEEEEccccCCCCCccccCcCcccCCCCceEEE-ccCCcceeeEEechHHeEECcCCCCHHHHhhhchHHHHHHHHHhc
Confidence 9999999999999999999999999987766543 246999999999999999999999998887666778888766788
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHH-CCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868 178 NIGPETNVLIMGAGPIGLVTMLGAPRA-FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~-~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 256 (365)
++++|++|||+|+|++|++++| +++. +|++.+++++++++|.++++++|++.++++.+ .++.+.+.. .+.++
T Consensus 157 ~~~~g~~vlI~g~g~vG~~~~~-~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~~~~~~----~g~~~ 229 (339)
T PRK10083 157 GPTEQDVALIYGAGPVGLTIVQ-VLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ--EPLGEALEE----KGIKP 229 (339)
T ss_pred CCCCCCEEEEECCCHHHHHHHH-HHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHhc----CCCCC
Confidence 9999999999999999999999 8885 69988888999999999999999988877543 445444422 14456
Q ss_pred eEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCcHHHHHHHHHcCCCCCCCceEE
Q 017868 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTH 336 (365)
Q Consensus 257 d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~ 336 (365)
|++||++|.+..+..++++++++|+++.+|............+..+.+++.+.....+.+.+++++++++.+.+...+++
T Consensus 230 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 309 (339)
T PRK10083 230 TLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITH 309 (339)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheee
Confidence 79999999777889999999999999999865433233333445677787776555677999999999999854435778
Q ss_pred EecCChhhHHHHHHHHhcC-CCceEEEEeC
Q 017868 337 RFGFSQKEVEEAFETSARG-GTAIKVMFNL 365 (365)
Q Consensus 337 ~~~~~~~~~~~a~~~~~~~-~~~gk~vi~~ 365 (365)
+|++ +++++|++.+.++ ...+|+++++
T Consensus 310 ~~~l--~~~~~a~~~~~~~~~~~~kvvv~~ 337 (339)
T PRK10083 310 TFDF--QHVADAIELFEKDQRHCCKVLLTF 337 (339)
T ss_pred eecH--HHHHHHHHHHhcCCCceEEEEEec
Confidence 8888 9999999998865 4679999875
No 31
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=5.4e-44 Score=330.41 Aligned_cols=338 Identities=31% Similarity=0.515 Sum_probs=281.2
Q ss_pred eeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC---
Q 017868 19 MAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT--- 94 (365)
Q Consensus 19 ~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~--- 94 (365)
|++++.+.+ .+++++.+.|.|+++||+|||.++++|+.|+....|.+.. ..+|.++|||++|+|+++|+++++
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~~ 78 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR---VPLPIILGHEGVGRVVALGGGVTTDVA 78 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC---CCCCcccccCCceEEEEeCCCcccccc
Confidence 678888765 9999999999999999999999999999999988775321 356889999999999999999986
Q ss_pred ---CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC------CCCcceeeEEeecCC-ceEECCCCCCcchhccc
Q 017868 95 ---LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------PVHGSLANQVVHPAD-LCFKLPDNVSLEEGAMC 164 (365)
Q Consensus 95 ---~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~v~~~-~~~~iP~~~~~~~a~~~ 164 (365)
|++||+|++.+..+|++|.+|+.+.+++|+...+++.. ...|+|+||+.++++ +++++|+++++++++.+
T Consensus 79 ~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~ 158 (361)
T cd08231 79 GEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPA 158 (361)
T ss_pred CCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHh
Confidence 99999999999999999999999999999987665542 246999999999986 79999999999888888
Q ss_pred -hhhHHHHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCc-ccH
Q 017868 165 -EPLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL-QDI 241 (365)
Q Consensus 165 -~~~~~a~~~~~~-~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~-~~~ 241 (365)
.++.|||++++. ...++|++|||+|+|++|+++++ +++.+|++.++++++++++.++++++|++.++++.... .++
T Consensus 159 ~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~-lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 237 (361)
T cd08231 159 NCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVA-AAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQR 237 (361)
T ss_pred cCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHH
Confidence 488999999865 44569999999998999999999 99999996688888899999999999998887754321 122
Q ss_pred HHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC--CccccchHhhhcCcEEEeeccc-CCcHHH
Q 017868 242 AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFRY-KNTWPL 318 (365)
Q Consensus 242 ~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~-~~~~~~ 318 (365)
...+++.. .+.++|++||++|....+..++++++++|+++.+|.... ...+....++.+++++.+++.. .+.+++
T Consensus 238 ~~~i~~~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (361)
T cd08231 238 RAIVRDIT--GGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYR 315 (361)
T ss_pred HHHHHHHh--CCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHH
Confidence 23455443 257899999999976678899999999999999986432 2233334468889999988765 567899
Q ss_pred HHHHHHcC--CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 319 CLELLRSG--KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 319 ~~~~l~~g--~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+++++.++ .+.+.+.++++|++ +++.+|++.+.++. .+|+||+.
T Consensus 316 ~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~-~~k~vi~~ 361 (361)
T cd08231 316 AVRFLERTQDRFPFAELVTHRYPL--EDINEALELAESGT-ALKVVIDP 361 (361)
T ss_pred HHHHHHhccCcCCchhheeeeeeH--HHHHHHHHHHHcCC-ceEEEeCC
Confidence 99999998 55566778899988 99999999988875 58999863
No 32
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1e-44 Score=327.13 Aligned_cols=306 Identities=21% Similarity=0.299 Sum_probs=249.0
Q ss_pred cceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeC-cccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868 17 VNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGIC-GSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (365)
Q Consensus 17 ~~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~-~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (365)
+++++++.+++.+++.+.|.|+|+++||+|||.++++| .+|...+.|.+.......+|.++|||++|+|+++|+++ +|
T Consensus 1 ~~ka~~~~~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~ 79 (308)
T TIGR01202 1 KTQAIVLSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GF 79 (308)
T ss_pred CceEEEEeCCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CC
Confidence 47888999899999999999999999999999999997 58988877754221113569999999999999999998 59
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHH
Q 017868 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACR 175 (365)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~ 175 (365)
++||||+.. |..|..|.. ...|+|+||+.++++.++++|++++++. +.+++..|||++++
T Consensus 80 ~vGdrV~~~----~~~c~~~~~---------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~~~~~a~~~~~ 139 (308)
T TIGR01202 80 RPGDRVFVP----GSNCYEDVR---------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALLALAATARHAVA 139 (308)
T ss_pred CCCCEEEEe----Ccccccccc---------------ccCCcccceEEcCHHHceeCCCCCCHHH-HhhhHHHHHHHHHH
Confidence 999999873 222333211 1359999999999999999999999764 55567789999987
Q ss_pred hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868 176 RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 255 (365)
Q Consensus 176 ~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 255 (365)
... .+++++||+|+|++|++++| +++.+|++++++++.+++|.+.++++ .++++.. + .+.+
T Consensus 140 ~~~-~~~~~vlV~G~G~vG~~a~q-~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~---~-----------~~~g 200 (308)
T TIGR01202 140 GAE-VKVLPDLIVGHGTLGRLLAR-LTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEK---D-----------PRRD 200 (308)
T ss_pred hcc-cCCCcEEEECCCHHHHHHHH-HHHHcCCceEEEeCCCHHHHHhhhhc---cccChhh---c-----------cCCC
Confidence 643 46889999999999999999 99999998788888888887766553 2332111 0 1468
Q ss_pred ceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCce
Q 017868 256 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLV 334 (365)
Q Consensus 256 ~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~ 334 (365)
+|+||||+|....++.++++++++|+++.+|.......++...++.+++++.++..+ .++++++++++++|.+.+.+.+
T Consensus 201 ~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~i 280 (308)
T TIGR01202 201 YRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLI 280 (308)
T ss_pred CCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhcc
Confidence 999999999877889999999999999999976544455666777889999987765 5679999999999999877789
Q ss_pred EEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 335 THRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 335 ~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
+++|+| +++.+|++.+.++...+|++|+
T Consensus 281 t~~~~l--~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 281 THQRPA--SDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred ceeecH--HHHHHHHHHHhcCcCceEEEeC
Confidence 999999 9999999988877778999984
No 33
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=2.1e-43 Score=330.77 Aligned_cols=330 Identities=24% Similarity=0.374 Sum_probs=264.8
Q ss_pred cceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhh-hccccCC---ccCCCCcccCccceEEEEEeCCCC
Q 017868 17 VNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL-KTLRCAD---FVVKEPMVIGHECAGVIEKVGSEV 92 (365)
Q Consensus 17 ~~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~-~g~~~~~---~~~~~p~~~G~e~~G~V~~vG~~v 92 (365)
+|+++++.+++.+++.++|.|+++++||+|||.++|+|++|++.+ .|..... ....+|.++|||++|+|+++|++|
T Consensus 2 ~~~a~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v 81 (410)
T cd08238 2 KTKAWRMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKW 81 (410)
T ss_pred CcEEEEEEcCCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCc
Confidence 588999999999999999999999999999999999999999876 3421111 012468899999999999999999
Q ss_pred C-CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCC----ceEECCCCCCcchhccchhh
Q 017868 93 K-TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD----LCFKLPDNVSLEEGAMCEPL 167 (365)
Q Consensus 93 ~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~----~~~~iP~~~~~~~a~~~~~~ 167 (365)
+ +|++||||++.+...|+.|.+|.. ++. ..+|+|+||++++++ .++++|+++++++|+.+.++
T Consensus 82 ~~~~~vGdrV~~~~~~~c~~~~~c~~-----------~g~-~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl 149 (410)
T cd08238 82 QGKYKPGQRFVIQPALILPDGPSCPG-----------YSY-TYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPL 149 (410)
T ss_pred cCCCCCCCEEEEcCCcCCCCCCCCCC-----------ccc-cCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchH
Confidence 8 599999999998888998887731 111 246999999999987 68999999999999877554
Q ss_pred HHH---HHHH---------HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCC--CCeEEEEeCChhHHHHHHHc------
Q 017868 168 SVG---LHAC---------RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFG--APRIVIVDVDDYRLSVAKEI------ 226 (365)
Q Consensus 168 ~~a---~~~~---------~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g--~~~vi~v~~~~~~~~~~~~~------ 226 (365)
+++ +.++ +.+++++|++|+|+|+ |++|++++| +++.+| +..|++++++++|.++++++
T Consensus 150 ~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq-~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~ 228 (410)
T cd08238 150 SCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAID-YAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAA 228 (410)
T ss_pred HHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHH-HHHhcccCCceEEEEcCCHHHHHHHHHhcccccc
Confidence 443 3332 3467899999999975 999999999 888875 45788999999999999997
Q ss_pred --CCC-EEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC-CC--CccccchHhh
Q 017868 227 --GAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG-HH--EMTVPLTPAA 300 (365)
Q Consensus 227 --g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~-~~--~~~~~~~~~~ 300 (365)
|++ .++++.. ..++.+.+++++. +.++|++||++|....+..++++++++|+++.++.. .. ...++...+.
T Consensus 229 ~~Ga~~~~i~~~~-~~~~~~~v~~~t~--g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~ 305 (410)
T cd08238 229 SRGIELLYVNPAT-IDDLHATLMELTG--GQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVH 305 (410)
T ss_pred ccCceEEEECCCc-cccHHHHHHHHhC--CCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhh
Confidence 665 3444321 2456666666543 668999999999878889999999999988776432 11 2345555678
Q ss_pred hcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 301 VREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 301 ~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
.+++++.|++.. ..+++++++++++|++++.+.++++|+| +++.+|++.+. ++..||+|+.+
T Consensus 306 ~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l--~~~~~A~~~~~-~~~~gKvvl~~ 368 (410)
T cd08238 306 YNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGL--NAAAETTLNLP-GIPGGKKLIYT 368 (410)
T ss_pred hcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecH--HHHHHHHHHhh-ccCCceEEEEC
Confidence 899999998765 5678999999999999877789999999 99999999999 77889999863
No 34
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.8e-43 Score=322.80 Aligned_cols=338 Identities=29% Similarity=0.410 Sum_probs=277.9
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (365)
|+++++.+++.+++.+.+.|.+.++||+|||.++++|++|++...+.+.. ...|.++|||++|+|+++|++++++++
T Consensus 1 mka~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~---~~~~~~~G~e~~G~V~~vG~~v~~~~~ 77 (351)
T cd08285 1 MKAFAMLGIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG---ERHGMILGHEAVGVVEEVGSEVKDFKP 77 (351)
T ss_pred CceEEEccCCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC---CCCCcccCcceEEEEEEecCCcCccCC
Confidence 68899999888999999999999999999999999999999887764322 355889999999999999999999999
Q ss_pred CCEEEEcCCcCCCCCccccCCCCCCCCCcc--ccccCCCCcceeeEEeecCC--ceEECCCCCCcchhccch-hhHHHHH
Q 017868 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMK--FFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGLH 172 (365)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~a~~~~-~~~~a~~ 172 (365)
||+|++.+..+|++|.+|..++.++|.+.. +.......|+|+||+.++.. .++++|+++++++++.++ ++.+|++
T Consensus 78 Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~ 157 (351)
T cd08285 78 GDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFH 157 (351)
T ss_pred CCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHH
Confidence 999999888899999999999999998642 11112346999999999974 899999999999988875 7889999
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868 173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 252 (365)
Q Consensus 173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~ 252 (365)
+++.+++++|++|||+|+|++|++++| +++..|++.++++++++++.++++++|++.++++.. .++.+.+.... .
T Consensus 158 ~~~~~~~~~g~~vlI~g~g~iG~~~~~-lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~~--~ 232 (351)
T cd08285 158 GAELANIKLGDTVAVFGIGPVGLMAVA-GARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN--GDVVEQILKLT--G 232 (351)
T ss_pred HHHccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC--CCHHHHHHHHh--C
Confidence 987788999999999988999999999 999999987899999999999999999988877543 46666666553 2
Q ss_pred CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc--cccchH--hhhcCcEEEeeccc--CCcHHHHHHHHHcC
Q 017868 253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM--TVPLTP--AAVREVDVVGVFRY--KNTWPLCLELLRSG 326 (365)
Q Consensus 253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~--~~~~~~--~~~~~~~i~~~~~~--~~~~~~~~~~l~~g 326 (365)
+.++|+++|++|....+..++++++++|+++.+|...... ..+... ...+..++.+.+.. .++++++++++++|
T Consensus 233 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g 312 (351)
T cd08285 233 GKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYG 312 (351)
T ss_pred CCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHcC
Confidence 5689999999998778899999999999999998654321 222111 23455566655432 56899999999999
Q ss_pred CCCCCC-ceEEEecCChhhHHHHHHHHhcCC-CceEEEEeC
Q 017868 327 KIDVKP-LVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL 365 (365)
Q Consensus 327 ~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vi~~ 365 (365)
++.+.. ...+.|++ +++.+|++.+.+++ ..+|++|.+
T Consensus 313 ~i~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 313 RVDPSKLLTHHFFGF--DDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred CCChhhceeccccCH--HHHHHHHHHHhcccCCeEEEEEeC
Confidence 996522 34456778 99999999998886 479999875
No 35
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1.5e-42 Score=319.43 Aligned_cols=339 Identities=30% Similarity=0.568 Sum_probs=281.2
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccC--C----ccCCCCcccCccceEEEEEeCCC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA--D----FVVKEPMVIGHECAGVIEKVGSE 91 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~--~----~~~~~p~~~G~e~~G~V~~vG~~ 91 (365)
||++++++++.+++.+++.|++.++||+||+.++++|+.|+....|.... . ....+|.++|+|++|+|+++|++
T Consensus 1 mka~~~~~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~ 80 (350)
T cd08256 1 MRAVVCHGPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEG 80 (350)
T ss_pred CeeEEEecCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCC
Confidence 57899998889999999999999999999999999999999888764210 0 00145778999999999999999
Q ss_pred CC--CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc-CCCCcceeeEEeecCC-ceEECCCCCCcchhccchhh
Q 017868 92 VK--TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT-PPVHGSLANQVVHPAD-LCFKLPDNVSLEEGAMCEPL 167 (365)
Q Consensus 92 v~--~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~-~~~~iP~~~~~~~a~~~~~~ 167 (365)
++ +|++||+|++.+..+|+.|++|..+.+++|....+++. ....|+|++|+.++++ .++++|+++++++++.+.++
T Consensus 81 v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~ 160 (350)
T cd08256 81 AEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILIEPL 160 (350)
T ss_pred cccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhhhHH
Confidence 99 89999999999999999999999999999987654443 1246999999999987 67899999999888877788
Q ss_pred HHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 017868 168 SVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 247 (365)
Q Consensus 168 ~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~ 247 (365)
.++|++++.+++++|++|||.|+|.+|+++++ +++.+|+.+++++++++++.++++++|++.+++.. ..++.+.+.+
T Consensus 161 ~ta~~a~~~~~~~~g~~vlI~g~g~vG~~~~~-~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~~~~~ 237 (350)
T cd08256 161 ACALHAVDRANIKFDDVVVLAGAGPLGLGMIG-AARLKNPKKLIVLDLKDERLALARKFGADVVLNPP--EVDVVEKIKE 237 (350)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCC--CcCHHHHHHH
Confidence 89999887788999999999777999999999 99999998888999999999999999998776643 3566666665
Q ss_pred HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHh-hhcCcEEEeecccCCcHHHHHHHHHcC
Q 017868 248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPA-AVREVDVVGVFRYKNTWPLCLELLRSG 326 (365)
Q Consensus 248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~l~~g 326 (365)
+. .+.++|++||++|....+..++++++++|+++.+|............+ ..+++++.++......+.+++++++++
T Consensus 238 ~~--~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g 315 (350)
T cd08256 238 LT--GGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLIASG 315 (350)
T ss_pred Hh--CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHHHHcC
Confidence 53 256899999999976678889999999999999975433333333322 356777777766666789999999999
Q ss_pred CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868 327 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363 (365)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi 363 (365)
.+.+.+.+.+.|++ +++.+|++.++++...+|+++
T Consensus 316 ~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 316 RLPTDGIVTHQFPL--EDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred CCChhHheEEEeEH--HHHHHHHHHHHhCCCceEEeC
Confidence 99544446788888 999999999999988899875
No 36
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.8e-42 Score=318.07 Aligned_cols=338 Identities=57% Similarity=0.981 Sum_probs=281.3
Q ss_pred eEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCC
Q 017868 20 AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99 (365)
Q Consensus 20 ~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 99 (365)
+.++.+++.+++++.+.|.+.++||+|||.++++|+.|+....+...+......|.++|+|++|+|+++|+++++|++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 80 (343)
T cd05285 1 AAVLHGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGD 80 (343)
T ss_pred CceEecCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCC
Confidence 35788889999999999999999999999999999999987643222222224577899999999999999999999999
Q ss_pred EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhcCC
Q 017868 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI 179 (365)
Q Consensus 100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~~~ 179 (365)
+|++.+..+|++|++|..+..++|++...++.....|+|++|+.++++.++++|+++++++++.+.++.+|+++++.+++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~~~~~~~ 160 (343)
T cd05285 81 RVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHACRRAGV 160 (343)
T ss_pred EEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhhhHHHHHHHHHHhcCC
Confidence 99999999999999999999999987644343335799999999999999999999999998877778889988888899
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCccc---HHHHHHHHHHHhCCCc
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQD---IAEEVEKIQKAMGTGI 256 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~ 256 (365)
++|+++||+|+|.+|+++++ +++.+|++.++++.+++++.++++++|++.+++++. .+ +.+.+.+.. .+.++
T Consensus 161 ~~g~~vlI~g~g~vG~~a~~-lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~~~~~~~~--~~~~~ 235 (343)
T cd05285 161 RPGDTVLVFGAGPIGLLTAA-VAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT--EDTPESAEKIAELL--GGKGP 235 (343)
T ss_pred CCCCEEEEECCCHHHHHHHH-HHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc--ccchhHHHHHHHHh--CCCCC
Confidence 99999999988999999999 999999976888888899999999999998877543 33 355565543 25679
Q ss_pred eEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCcHHHHHHHHHcCCCCCCCceEE
Q 017868 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTH 336 (365)
Q Consensus 257 d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~ 336 (365)
|++|||.|....+...+++++++|+++.+|........+.....++++++.+.....+.+++++++++++.+.+.+...+
T Consensus 236 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 315 (343)
T cd05285 236 DVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKPLITH 315 (343)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchHhEEE
Confidence 99999999766788999999999999999854433333444677888888887766778899999999998754455678
Q ss_pred EecCChhhHHHHHHHHhcCC-CceEEEEe
Q 017868 337 RFGFSQKEVEEAFETSARGG-TAIKVMFN 364 (365)
Q Consensus 337 ~~~~~~~~~~~a~~~~~~~~-~~gk~vi~ 364 (365)
+|++ +++.+|++.+.++. ..+|++|.
T Consensus 316 ~~~l--~~~~~a~~~~~~~~~~~~k~~~~ 342 (343)
T cd05285 316 RFPL--EDAVEAFETAAKGKKGVIKVVIE 342 (343)
T ss_pred EEeH--HHHHHHHHHHHcCCCCeeEEEEe
Confidence 8888 99999999998874 56999974
No 37
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=3.7e-42 Score=318.56 Aligned_cols=339 Identities=26% Similarity=0.412 Sum_probs=274.8
Q ss_pred hcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868 16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (365)
Q Consensus 16 ~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (365)
.+++++|+..+ +.++++++|.|.+.++||+|||.++++|++|++...|.. ...+|.++|||++|+|+++|++++.
T Consensus 6 ~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~----~~~~p~v~G~e~~G~V~~vG~~v~~ 81 (373)
T cd08299 6 IKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKL----VTPFPVILGHEAAGIVESVGEGVTT 81 (373)
T ss_pred ceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCC----CCCCCccccccceEEEEEeCCCCcc
Confidence 45888888864 579999999999999999999999999999999987753 2356889999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc--------------------CCCCcceeeEEeecCCceEECCC
Q 017868 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--------------------PPVHGSLANQVVHPADLCFKLPD 154 (365)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~~~v~~~~~~~iP~ 154 (365)
+++||+|++.+..+|++|.+|+.++++.|+.....+. ....|+|+||+++++++++++|+
T Consensus 82 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~ 161 (373)
T cd08299 82 VKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDA 161 (373)
T ss_pred CCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCC
Confidence 9999999999999999999999999999987543210 00258999999999999999999
Q ss_pred CCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEE
Q 017868 155 NVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIV 232 (365)
Q Consensus 155 ~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~ 232 (365)
++++++++.++ ++.+||+++ +.+++++|++|||+|+|++|+++++ +++..|+..|+++++++++.+.++++|++.++
T Consensus 162 ~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~-~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i 240 (373)
T cd08299 162 AAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIM-GCKAAGASRIIAVDINKDKFAKAKELGATECI 240 (373)
T ss_pred CCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEcCCHHHHHHHHHcCCceEe
Confidence 99999999886 788999886 5688999999999988999999999 99999996688888999999999999998888
Q ss_pred eCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhc-ccCCEEEEEccCCCCccccchH-hhhcCcEEEeec
Q 017868 233 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT-CAGGKVCLVGMGHHEMTVPLTP-AAVREVDVVGVF 310 (365)
Q Consensus 233 ~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l-~~~G~~~~~g~~~~~~~~~~~~-~~~~~~~i~~~~ 310 (365)
+..+.++++...++++. ++++|+++|++|.+..+..++..+ +++|+++.+|............ ...++.++.+.+
T Consensus 241 ~~~~~~~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~ 317 (373)
T cd08299 241 NPQDYKKPIQEVLTEMT---DGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAV 317 (373)
T ss_pred cccccchhHHHHHHHHh---CCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEE
Confidence 75443334555565553 358999999999766777766654 5789999998653322222222 234667777765
Q ss_pred cc----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 311 RY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 311 ~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
.. ...+.++++.+.++.+.+.+.++++|++ +++.+|++.+.+++ ..|+++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~e~~~a~~~~~~~~-~~k~~~~~ 373 (373)
T cd08299 318 FGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPF--EKINEGFDLLRSGK-SIRTVLTF 373 (373)
T ss_pred ecCCccHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCC-cceEEEeC
Confidence 43 2466778888888877666778899998 99999999988765 46888864
No 38
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=3.3e-42 Score=314.88 Aligned_cols=329 Identities=23% Similarity=0.387 Sum_probs=278.4
Q ss_pred ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (365)
Q Consensus 18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (365)
|+++++.++ +.+++.++|.|++.++||+|||.++++|+.|+....|.... ..+|.++|||++|+|+++|+++++|+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~vG~~v~~~~ 77 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG---LSYPRVPGHEVVGRIDAVGEGVSRWK 77 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC---CCCCcccCcceeEEEEEECCCCccCC
Confidence 688999887 68999999999999999999999999999999988764321 34578999999999999999999999
Q ss_pred CCCEEEEcC-CcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH
Q 017868 97 PGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (365)
Q Consensus 97 ~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~ 174 (365)
+||+|++.+ ...|++|.+|..++++.|......+. ...|++++|+.++.+.++++|+++++++++.++ .+.+|++++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~-~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~ 156 (333)
T cd08296 78 VGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGV-TRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNAL 156 (333)
T ss_pred CCCEEEeccccCCCCCChhhhCcCcccCCCCCccCc-ccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence 999998743 56799999999999999998765543 246999999999999999999999999888775 778899988
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~ 254 (365)
+..++.++++|||+|+|.+|+++++ +++.+|+ .++++++++++.++++++|++.++++.+ .++.+.+++. .
T Consensus 157 ~~~~~~~~~~vlV~g~g~iG~~~~~-~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~-----~ 227 (333)
T cd08296 157 RNSGAKPGDLVAVQGIGGLGHLAVQ-YAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK--EDVAEALQEL-----G 227 (333)
T ss_pred HhcCCCCCCEEEEECCcHHHHHHHH-HHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC--ccHHHHHHhc-----C
Confidence 7678999999999999999999999 9999999 5788888899999999999988776533 4555555443 4
Q ss_pred CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCc
Q 017868 255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPL 333 (365)
Q Consensus 255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~ 333 (365)
++|+++|+.|....+...+++++++|+++.+|.......++...++.+++++.++... ...+.+++++++++.+ .+.
T Consensus 228 ~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l--~~~ 305 (333)
T cd08296 228 GAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGV--RPM 305 (333)
T ss_pred CCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCC--Cce
Confidence 7999999987667888999999999999999865544455555567899999998754 5678889999988887 444
Q ss_pred eEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 334 VTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 334 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
+ +.|++ +++.+|++.+++++.+||+|++
T Consensus 306 v-~~~~~--~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 306 V-ETFPL--EKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred E-EEEEH--HHHHHHHHHHHCCCCceeEEeC
Confidence 4 57888 9999999999999999999875
No 39
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=5.1e-42 Score=319.20 Aligned_cols=339 Identities=29% Similarity=0.477 Sum_probs=278.9
Q ss_pred ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (365)
|+++++.+++.+++.++|.|.| .++||+||+.++++|++|+....|.+.. ..+|.++|||++|+|+++|+++++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~ 77 (386)
T cd08283 1 MKALVWHGKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG---MKKGDILGHEFMGVVEEVGPEVRNLK 77 (386)
T ss_pred CeeEEEecCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC---CCCCccccccceEEEEEeCCCCCCCC
Confidence 6788898889999999999998 5999999999999999999998875432 34588999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccc---------------c----CCCCcceeeEEeecCC--ceEECCCC
Q 017868 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA---------------T----PPVHGSLANQVVHPAD--LCFKLPDN 155 (365)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~----~~~~g~~~~~~~v~~~--~~~~iP~~ 155 (365)
+||+|++.+...|++|++|..+.+++|++..... . ....|+|+||+.++++ .++++|++
T Consensus 78 ~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~ 157 (386)
T cd08283 78 VGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDD 157 (386)
T ss_pred CCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCC
Confidence 9999999998899999999999999998754321 0 1236999999999987 89999999
Q ss_pred CCcchhccch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868 156 VSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 234 (365)
Q Consensus 156 ~~~~~a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~ 234 (365)
+++++|+.++ .+.+||++++.+++.+|++|||+|+|.+|+++++ +++..|+.+++++++++++.+++++++...++++
T Consensus 158 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g~G~vG~~~~~-la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~ 236 (386)
T cd08283 158 LSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVGLFAAR-SAKLLGAERVIAIDRVPERLEMARSHLGAETINF 236 (386)
T ss_pred CCHHHHhhhccchhhhHHHHhhccCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcC
Confidence 9999999876 7889999997788999999999988999999999 9999998678999999999999999854455554
Q ss_pred CCCcccHHHHHHHHHHHhCCCceEEEeCCCC---------------------HHHHHHHHHhcccCCEEEEEccCCCC-c
Q 017868 235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGL---------------------NKTMSTALGATCAGGKVCLVGMGHHE-M 292 (365)
Q Consensus 235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~---------------------~~~~~~~~~~l~~~G~~~~~g~~~~~-~ 292 (365)
... .++.+.++++.. +.++|++||++|+ ...+..++++++++|+++.+|..... .
T Consensus 237 ~~~-~~~~~~l~~~~~--~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~ 313 (386)
T cd08283 237 EEV-DDVVEALRELTG--GRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVN 313 (386)
T ss_pred Ccc-hHHHHHHHHHcC--CCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcC
Confidence 321 146666665532 5589999999974 23677899999999999999854332 2
Q ss_pred cccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCC-CceEEEEeC
Q 017868 293 TVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL 365 (365)
Q Consensus 293 ~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vi~~ 365 (365)
.........+++++.+.... .+.+.+++++++++.+...+..++.|++ +++.+|++.+.++. ..+|+||+.
T Consensus 314 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 314 KFPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPL--EDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred ccCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecH--HHHHHHHHHHHhCCCCeEEEEecC
Confidence 23333456788888886544 5678899999999998654456788888 99999999988875 578999863
No 40
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1.2e-41 Score=312.42 Aligned_cols=335 Identities=28% Similarity=0.490 Sum_probs=280.7
Q ss_pred ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (365)
Q Consensus 18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (365)
|+++++..+ +.+++.+.+.|++.++||+|||.++++|+.|+....|.+.......+|.++|+|++|+|+++|+++++|+
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 578888865 6899999999999999999999999999999998877553323356688999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHH
Q 017868 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR 175 (365)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~ 175 (365)
+||+|++.+...|+.|..|..+..++|++..+.+. ..+|+|++|+.+++++++++|+++++++++.++ .+.|||+++.
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~ 159 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGI-GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVK 159 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCc-cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHH
Confidence 99999999999999999999999999999988877 567999999999999999999999999988886 7889999985
Q ss_pred h--cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868 176 R--ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 176 ~--~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~ 253 (365)
. ..+.++++|||+|+|.+|+++++ +++..|...++++++++++.+.++++|++++++++. . +.+.+++... +
T Consensus 160 ~~~~~~~~~~~vlI~g~~~vg~~~~~-~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~-~~~~i~~~~~--~ 233 (340)
T cd05284 160 KALPYLDPGSTVVVIGVGGLGHIAVQ-ILRALTPATVIAVDRSEEALKLAERLGADHVLNASD--D-VVEEVRELTG--G 233 (340)
T ss_pred HhcccCCCCCEEEEEcCcHHHHHHHH-HHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCc--c-HHHHHHHHhC--C
Confidence 4 46889999999999889999999 999999335777778889999999999988776543 2 6666665532 4
Q ss_pred CCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCC
Q 017868 254 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKP 332 (365)
Q Consensus 254 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~ 332 (365)
.++|+++|++|........+++|+++|+++.+|.... ..+.......+++++.+.... ...+.+++++++++.+. +
T Consensus 234 ~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--~ 310 (340)
T cd05284 234 RGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVK--V 310 (340)
T ss_pred CCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCC--c
Confidence 6899999999976688899999999999999985442 223333345688888876543 56788999999999884 3
Q ss_pred ceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 333 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 333 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
..+.|++ +++++|++.+++++..||+++.+
T Consensus 311 -~~~~~~~--~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 311 -EITKFPL--EDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred -ceEEEeH--HHHHHHHHHHHcCCccceEEecC
Confidence 3466777 99999999999999999999864
No 41
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=1.9e-41 Score=311.05 Aligned_cols=337 Identities=31% Similarity=0.563 Sum_probs=275.2
Q ss_pred ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (365)
Q Consensus 18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (365)
||++++.++ +.+++.+.|.|.|.++||+||+.++++|+.|+.++.+.........+|.++|||++|+|+++|+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 467777665 4799999999999999999999999999999987665322211234677899999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHh
Q 017868 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR 176 (365)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~ 176 (365)
+||+|++.+..+|+.|++|..+++++|+.....+ ...+|+|++|+.++++.++++|+++++++++.+.++.++++++..
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~~~~~~~~~~~~~ 159 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG-VNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAVHTALS 159 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcceee-ecCCCcceeeEEechHHeEECcCCCCHHHhHhhhHHHHHHHHHHc
Confidence 9999999999999999999999999998754333 235799999999999999999999999888866677777665533
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868 177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 256 (365)
...+|++|+|+|+|++|++++| +++..|+++++++++++++.++++++|++.+++++. .++.+.++++.. +.++
T Consensus 160 -~~~~g~~vlV~~~g~vg~~~~~-la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~--~~~~~~~~~~~~--~~~~ 233 (341)
T PRK05396 160 -FDLVGEDVLITGAGPIGIMAAA-VAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK--EDLRDVMAELGM--TEGF 233 (341)
T ss_pred -CCCCCCeEEEECCCHHHHHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHHHhcC--CCCC
Confidence 3468999999988999999999 999999976788888899999999999988876543 466666665532 5789
Q ss_pred eEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc--CCcHHHHHHHHHcCCCCCCCce
Q 017868 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLV 334 (365)
Q Consensus 257 d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~~~~~~ 334 (365)
|++|||.|....+...+++++++|+++.+|.......+....++++++++.+.... .+.+.+++++++++ +.+.+.+
T Consensus 234 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 312 (341)
T PRK05396 234 DVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LDLSPII 312 (341)
T ss_pred CEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcC-CChhHhe
Confidence 99999999877889999999999999999865444444445677788888876432 34566788999988 4345567
Q ss_pred EEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 335 THRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 335 ~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
.+.+++ +++.+|++.+.++. .||++++|
T Consensus 313 ~~~~~l--~~~~~a~~~~~~~~-~gk~vv~~ 340 (341)
T PRK05396 313 THRFPI--DDFQKGFEAMRSGQ-SGKVILDW 340 (341)
T ss_pred EEEEeH--HHHHHHHHHHhcCC-CceEEEec
Confidence 788888 99999999998876 79999975
No 42
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=2.4e-41 Score=312.62 Aligned_cols=334 Identities=27% Similarity=0.455 Sum_probs=275.8
Q ss_pred eeEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868 19 MAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (365)
Q Consensus 19 ~~~~~~~-~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (365)
+++++.+ ++++++.+.+.|.+.++||+||+.++++|+.|++...|... ..+|.++|||++|+|+++|++++.+++
T Consensus 2 ~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~----~~~~~i~g~e~~G~V~~vG~~v~~~~~ 77 (365)
T cd05279 2 KAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP----TPLPVILGHEGAGIVESIGPGVTTLKP 77 (365)
T ss_pred ceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC----CCCCcccccceeEEEEEeCCCcccCCC
Confidence 4677775 45899999999999999999999999999999998876432 345789999999999999999999999
Q ss_pred CCEEEEcCCcCCCCCccccCCCCCCCCCccccccC--------------------CCCcceeeEEeecCCceEECCCCCC
Q 017868 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP--------------------PVHGSLANQVVHPADLCFKLPDNVS 157 (365)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~g~~~~~~~v~~~~~~~iP~~~~ 157 (365)
||+|++.+..+|++|.+|+.+.+++|......+.. ...|+|++|+.++++.++++|++++
T Consensus 78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~ 157 (365)
T cd05279 78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAP 157 (365)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCC
Confidence 99999999899999999999999999876544210 0247899999999999999999999
Q ss_pred cchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCC
Q 017868 158 LEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 235 (365)
Q Consensus 158 ~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~ 235 (365)
+++++.+. .+.+||+++ +.+++++|++|||+|+|++|+++++ +++.+|++.++++++++++.++++++|++++++..
T Consensus 158 ~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~-~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 236 (365)
T cd05279 158 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIM-GCKAAGASRIIAVDINKDKFEKAKQLGATECINPR 236 (365)
T ss_pred HHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccc
Confidence 99988886 788899886 5688999999999988999999999 99999998788888899999999999998877654
Q ss_pred CCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcc-cCCEEEEEccCC--CCccccchHhhhcCcEEEeecc-
Q 017868 236 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC-AGGKVCLVGMGH--HEMTVPLTPAAVREVDVVGVFR- 311 (365)
Q Consensus 236 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~-~~G~~~~~g~~~--~~~~~~~~~~~~~~~~i~~~~~- 311 (365)
+.+.++.+.+++.. ++++|++||++|....+..++++++ ++|+++.+|... ....+....+ .+..++.+.+.
T Consensus 237 ~~~~~~~~~l~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~ 312 (365)
T cd05279 237 DQDKPIVEVLTEMT---DGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFG 312 (365)
T ss_pred cccchHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEecc
Confidence 32225555565543 4689999999997678889999999 999999998643 2334444445 67777777643
Q ss_pred ---cCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 312 ---YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 312 ---~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
..+.+.+++++++++.+.+.+..+++|++ +++.+|++.+++++. .|++++
T Consensus 313 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~~~~~~ 365 (365)
T cd05279 313 GWKSKDSVPKLVALYRQKKFPLDELITHVLPF--EEINDGFDLMRSGES-IRTILT 365 (365)
T ss_pred CCchHhHHHHHHHHHHcCCcchhHheeeeecH--HHHHHHHHHHhCCCc-eeeeeC
Confidence 25678899999999998655567888888 999999999887754 577764
No 43
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.6e-41 Score=317.09 Aligned_cols=342 Identities=21% Similarity=0.238 Sum_probs=278.1
Q ss_pred chhcceeEEEecC------CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCc------c-CCCCcccCcc
Q 017868 14 GEEVNMAAWLLGV------NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF------V-VKEPMVIGHE 80 (365)
Q Consensus 14 ~~~~~~~~~~~~~------~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~------~-~~~p~~~G~e 80 (365)
-+.+|+++++..+ ..+++.++|.|.++++||+|||.++++|++|+....|...... . ...+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 4567889887521 2588999999999999999999999999999988766411100 0 1123589999
Q ss_pred ceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcch
Q 017868 81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE 160 (365)
Q Consensus 81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~ 160 (365)
++|+|+++|++++.+++||+|++++...|+.|++|..+..++|....+++....+|+|++|+.++..+++++|+++++++
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~ 168 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEE 168 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHH
Confidence 99999999999999999999999999999999999999999999887777755679999999999999999999999999
Q ss_pred hccch-hhHHHHHHHHh---cCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCC
Q 017868 161 GAMCE-PLSVGLHACRR---ANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 235 (365)
Q Consensus 161 a~~~~-~~~~a~~~~~~---~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~ 235 (365)
++.++ ++.+||+++.. ++++++++|||+|+ |++|+++++ +++.+|++ ++++++++++.++++++|++.+++..
T Consensus 169 aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~-lak~~G~~-vv~~~~s~~~~~~~~~~G~~~~i~~~ 246 (393)
T cd08246 169 AAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQ-LARAAGAN-PVAVVSSEEKAEYCRALGAEGVINRR 246 (393)
T ss_pred HhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHH-HHHHcCCe-EEEEeCCHHHHHHHHHcCCCEEEccc
Confidence 88765 88899998742 67899999999997 999999999 99999995 55677889999999999999888753
Q ss_pred CCc--------------------ccHHHHHHHHHHHhCC-CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-Ccc
Q 017868 236 TNL--------------------QDIAEEVEKIQKAMGT-GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMT 293 (365)
Q Consensus 236 ~~~--------------------~~~~~~i~~~~~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~ 293 (365)
+.+ ..+.+.+.+++ .+. ++|++||++|. ..+..++++++++|+++.+|.... ...
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~--~~~~g~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 323 (393)
T cd08246 247 DFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDIL--GGREDPDIVFEHPGR-ATFPTSVFVCDRGGMVVICAGTTGYNHT 323 (393)
T ss_pred ccccccccccccchhhhhhhhccchHHHHHHHHh--CCCCCCeEEEECCch-HhHHHHHHHhccCCEEEEEcccCCCCCC
Confidence 211 12344444443 244 79999999996 578889999999999999975432 223
Q ss_pred ccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcC-CCceEEEEe
Q 017868 294 VPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN 364 (365)
Q Consensus 294 ~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vi~ 364 (365)
.+...+..++.++.+.+.. .+.+.+++++++++.+ .+..+++|++ +++++|++.+.++ +..||+++-
T Consensus 324 ~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~~gkvvv~ 392 (393)
T cd08246 324 YDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRI--DPCLSKVFSL--DETPDAHQLMHRNQHHVGNMAVL 392 (393)
T ss_pred CcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCc--eeeeeEEEeH--HHHHHHHHHHHhCccccceEEEe
Confidence 4445566788888887554 3578899999999988 4557788888 9999999999998 789999874
No 44
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=3.4e-41 Score=309.20 Aligned_cols=334 Identities=38% Similarity=0.668 Sum_probs=272.7
Q ss_pred EEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEE
Q 017868 22 WLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV 101 (365)
Q Consensus 22 ~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V 101 (365)
|+.+.+.+++.+.+.|++.++||+|||.++++|+.|+..............+|.++|+|++|+|+++|+++++|++||+|
T Consensus 2 ~~~~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V 81 (339)
T cd08232 2 VIHAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRV 81 (339)
T ss_pred eeccCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEE
Confidence 56788999999999999999999999999999999988764211112223457889999999999999999999999999
Q ss_pred EEcCCcCCCCCccccCCCCCCCCCcccccc----CCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhc
Q 017868 102 ALEPGISCWRCDHCKGGRYNLCPEMKFFAT----PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177 (365)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~ 177 (365)
++.+..+|++|++|..+..+.|..+...+. ....|+|++|+.++++.++++|+++++++|+.+.++.+|++++...
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~ 161 (339)
T cd08232 82 AVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLAVALHAVNRA 161 (339)
T ss_pred EEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhhcchHHHHHHHHHhc
Confidence 999999999999999999999998654442 1246999999999999999999999999988766788899988654
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868 178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 257 (365)
...++++|||.|+|.+|++++| +++.+|+++++++++++++.++++++|++.+++++. .+ +++... ...++|
T Consensus 162 ~~~~~~~VLI~g~g~vG~~~~~-lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~--~~----~~~~~~-~~~~vd 233 (339)
T cd08232 162 GDLAGKRVLVTGAGPIGALVVA-AARRAGAAEIVATDLADAPLAVARAMGADETVNLAR--DP----LAAYAA-DKGDFD 233 (339)
T ss_pred CCCCCCEEEEECCCHHHHHHHH-HHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--hh----hhhhhc-cCCCcc
Confidence 4339999999888999999999 999999966888888888889999999988776543 22 222221 235699
Q ss_pred EEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCcHHHHHHHHHcCCCCCCCceEEE
Q 017868 258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHR 337 (365)
Q Consensus 258 ~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~ 337 (365)
+++|+.|....+...+++|+++|+++.++............+..+++++.+.....+.+++++++++++.+.+.+.+.++
T Consensus 234 ~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 313 (339)
T cd08232 234 VVFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAV 313 (339)
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEE
Confidence 99999997667889999999999999987543222223333466788888876667788999999999998655557788
Q ss_pred ecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 338 FGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 338 ~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
|++ +++.+|++.+.++...||+|+++
T Consensus 314 ~~~--~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 314 FPL--EEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred ecH--HHHHHHHHHHHhCCCceeEEEeC
Confidence 888 99999999999888899999874
No 45
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=5.5e-41 Score=308.47 Aligned_cols=334 Identities=29% Similarity=0.503 Sum_probs=276.1
Q ss_pred ceeEEEecCCceEEEEecCCCCC-CCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~~-~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (365)
|+++++.++..++++++|+|+|. ++||+|||.++++|+.|+....|... ..+|.++|+|++|+|+++|+++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (344)
T cd08284 1 MKAVVFKGPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP----STPGFVLGHEFVGEVVEVGPEVRTLK 76 (344)
T ss_pred CeeEEEecCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCCcccccceEEEEEeeCCCccccC
Confidence 56888888889999999999985 99999999999999999988776432 34577899999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccc---cCCCCcceeeEEeecCC--ceEECCCCCCcchhccch-hhHHH
Q 017868 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA---TPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVG 170 (365)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~a~~~~-~~~~a 170 (365)
+||+|++.+..+|++|.+|..++.+.|++...++ ....+|+|++|+.++++ .++++|+++++++++.++ .+.||
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta 156 (344)
T cd08284 77 VGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTG 156 (344)
T ss_pred CCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHH
Confidence 9999999999999999999999999998776552 22346999999999965 999999999999988775 88899
Q ss_pred HHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868 171 LHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 171 ~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
|++++..++.++++|||+|+|.+|+++++ +++.+|+.+++++++++++.++++++|+.. ++. ...++...+.++..
T Consensus 157 ~~~~~~~~~~~~~~vlI~g~g~vg~~~~~-~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~-~~~--~~~~~~~~l~~~~~ 232 (344)
T cd08284 157 YFGAKRAQVRPGDTVAVIGCGPVGLCAVL-SAQVLGAARVFAVDPVPERLERAAALGAEP-INF--EDAEPVERVREATE 232 (344)
T ss_pred HhhhHhcCCccCCEEEEECCcHHHHHHHH-HHHHcCCceEEEEcCCHHHHHHHHHhCCeE-Eec--CCcCHHHHHHHHhC
Confidence 99987788899999999988999999999 999999756788888889999999999753 333 33466666666542
Q ss_pred HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeecc-cCCcHHHHHHHHHcCCC
Q 017868 251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFR-YKNTWPLCLELLRSGKI 328 (365)
Q Consensus 251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~l~~g~~ 328 (365)
+.++|++||++|........+++++++|+++.+|.... ...........+++++.+... ..+.+++++++++++.+
T Consensus 233 --~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 310 (344)
T cd08284 233 --GRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRL 310 (344)
T ss_pred --CCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCC
Confidence 57899999999977788899999999999999986542 222333345567777765433 26789999999999998
Q ss_pred CCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 329 DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
.+.+.+.+.|++ +++.++++.+.++.. +|+|++
T Consensus 311 ~~~~~~~~~~~~--~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 311 DLEFLIDHRMPL--EEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred ChHHhEeeeecH--HHHHHHHHHHhcCCc-eEEEec
Confidence 544456777877 999999999888777 999986
No 46
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=4.3e-41 Score=309.57 Aligned_cols=338 Identities=31% Similarity=0.504 Sum_probs=277.3
Q ss_pred ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (365)
|+++++.+++.+++.+.|.|.+ .++||+|||.++++|+.|+....|.... ..+|.++|+|++|+|+++|+++++++
T Consensus 1 ~ka~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~ 77 (347)
T cd05278 1 MKALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG---AKHGMILGHEFVGEVVEVGSDVKRLK 77 (347)
T ss_pred CceEEEecCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC---CCCCceeccceEEEEEEECCCccccC
Confidence 4788888888999999999999 9999999999999999999888775432 35578999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc--CCCCcceeeEEeecCC--ceEECCCCCCcchhccch-hhHHHH
Q 017868 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT--PPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGL 171 (365)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~a~~~~-~~~~a~ 171 (365)
+||+|++.+..+|++|.+|+.+...+|++...+.. ....|+|++|++++++ +++++|+++++++++.++ .+.+||
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~ 157 (347)
T cd05278 78 PGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGF 157 (347)
T ss_pred CCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhhee
Confidence 99999999999999999999999999988664421 1246999999999987 899999999999998886 788999
Q ss_pred HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868 172 HACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 172 ~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
+++...+++++++|||.|+|.+|++++| +++..|+.+++++++++++.++++++|++.++++.+ .++.+.+++..
T Consensus 158 ~~~~~~~~~~~~~VlI~g~g~vg~~~iq-lak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~i~~~~-- 232 (347)
T cd05278 158 HGAELAGIKPGSTVAVIGAGPVGLCAVA-GARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN--GDIVEQILELT-- 232 (347)
T ss_pred ehhhhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc--chHHHHHHHHc--
Confidence 9887788999999999888999999999 899999756888888889999999999888777543 45666666543
Q ss_pred hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccc-cchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCC
Q 017868 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV-PLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID 329 (365)
Q Consensus 252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~-~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~ 329 (365)
.+.++|++||++|....+...+++|+++|+++.+|........ .......+++.+.+.... .+.+++++++++++.+.
T Consensus 233 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 312 (347)
T cd05278 233 GGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKID 312 (347)
T ss_pred CCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCC
Confidence 2578999999999756888999999999999998754332211 111223566666665433 46788999999999985
Q ss_pred CCCceEEEecCChhhHHHHHHHHhcCCC-ceEEEEeC
Q 017868 330 VKPLVTHRFGFSQKEVEEAFETSARGGT-AIKVMFNL 365 (365)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~gk~vi~~ 365 (365)
+.+.....|++ +++.+|++.+..+.. .+|+|++.
T Consensus 313 ~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 313 PSKLITHRFPL--DDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred hhHcEEEEecH--HHHHHHHHHHhcCCCCceEEEecC
Confidence 43345677777 999999999888766 78999863
No 47
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=9.2e-41 Score=307.05 Aligned_cols=338 Identities=32% Similarity=0.541 Sum_probs=280.4
Q ss_pred ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (365)
|+++++.+++.+++.+.+.|+| .++||+|||.++++|+.|+..+.|.+.. ..+|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~ 77 (345)
T cd08286 1 MKALVYHGPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT---VTPGRILGHEGVGVVEEVGSAVTNFK 77 (345)
T ss_pred CceEEEecCCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC---CCCCceecccceEEEEEeccCccccC
Confidence 5788888888899999999996 8999999999999999999988875422 23478999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCC--ceEECCCCCCcchhccch-hhHHHHHH
Q 017868 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (365)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~a~~~~-~~~~a~~~ 173 (365)
+||+|++.+...|++|.+|..+..+.|....+......+|+|++|+.++.+ .++++|+++++.+++.+. .+.+||++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~ 157 (345)
T cd08286 78 VGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYEC 157 (345)
T ss_pred CCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHH
Confidence 999999999899999999999988888877664333456999999999987 899999999999888775 77888886
Q ss_pred H-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868 174 C-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 252 (365)
Q Consensus 174 ~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~ 252 (365)
+ +..++.+++++||+|+|.+|++++| +++.+|+.+++++++++++.++++++|++.++++.. .++...+.++..
T Consensus 158 ~~~~~~~~~g~~vlI~g~g~~g~~~~~-~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~~~-- 232 (345)
T cd08286 158 GVLNGKVKPGDTVAIVGAGPVGLAALL-TAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQVLELTD-- 232 (345)
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc--ccHHHHHHHHhC--
Confidence 5 5678999999999988999999999 999999546788888899999999999988777543 456566655532
Q ss_pred CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCcHHHHHHHHHcCCCCCCC
Q 017868 253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKP 332 (365)
Q Consensus 253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~ 332 (365)
+.++|++||++|....+..+++.|+++|+++.+|.......++...+..+++++.+.......+.+++++++++.+...+
T Consensus 233 ~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 312 (345)
T cd08286 233 GRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPSK 312 (345)
T ss_pred CCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCCChHH
Confidence 56899999999987788899999999999999986543344444445668888887544446788899999999986555
Q ss_pred ceEEEecCChhhHHHHHHHHhcCC--CceEEEEeC
Q 017868 333 LVTHRFGFSQKEVEEAFETSARGG--TAIKVMFNL 365 (365)
Q Consensus 333 ~~~~~~~~~~~~~~~a~~~~~~~~--~~gk~vi~~ 365 (365)
.++++|++ +++++|++.+.... ...|++|++
T Consensus 313 ~~~~~~~l--~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 313 LVTHRFKL--SEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred cEEeEeeH--HHHHHHHHHHhccCCCCeeEEEEeC
Confidence 56788888 99999999988753 456999874
No 48
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=6.5e-41 Score=309.76 Aligned_cols=334 Identities=29% Similarity=0.449 Sum_probs=273.4
Q ss_pred hcceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868 16 EVNMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (365)
Q Consensus 16 ~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (365)
++|+|+++.++ +.+++++.+.|.+.++||+|||.++++|+.|+....|.+. ...|.++|+|++|+|+++|+++++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~v~~ 76 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP----TPLPAVLGHEGAGVVEAVGSAVTG 76 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC----CCCCcccccceeEEEEEeCCCccc
Confidence 36889999874 6889999999999999999999999999999998876432 345789999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc----------------------CCCCcceeeEEeecCCceEEC
Q 017868 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----------------------PPVHGSLANQVVHPADLCFKL 152 (365)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~g~~~~~~~v~~~~~~~i 152 (365)
|++||+|++.+. .|++|.+|+.++.++|.+...... ....|+|++|+.+++.+++++
T Consensus 77 ~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~i 155 (365)
T cd08278 77 LKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKV 155 (365)
T ss_pred CCCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEEC
Confidence 999999999764 899999999999999986532210 012489999999999999999
Q ss_pred CCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 017868 153 PDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADN 230 (365)
Q Consensus 153 P~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~ 230 (365)
|+++++++++.++ .+.+|+.++ +...++++++|||+|+|++|+++++ +++..|++++++++++++|.++++++|++.
T Consensus 156 P~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~-la~~~G~~~v~~~~~~~~k~~~~~~~g~~~ 234 (365)
T cd08278 156 DKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVM-AAKIAGCTTIIAVDIVDSRLELAKELGATH 234 (365)
T ss_pred CCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCeEEEEeCCHHHHHHHHHcCCcE
Confidence 9999999888776 777888876 5678899999999988999999999 999999988999999999999999999988
Q ss_pred EEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC--CCccccchHhhhcCcEEEe
Q 017868 231 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEMTVPLTPAAVREVDVVG 308 (365)
Q Consensus 231 ~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~--~~~~~~~~~~~~~~~~i~~ 308 (365)
++++.. .++.+.+++.. +.++|+++||+|....+..++++++++|+++.+|... ....++...+..++.++.+
T Consensus 235 ~i~~~~--~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 309 (365)
T cd08278 235 VINPKE--EDLVAAIREIT---GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRG 309 (365)
T ss_pred EecCCC--cCHHHHHHHHh---CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEE
Confidence 776533 46666666543 5689999999997678899999999999999998542 2233444445567888877
Q ss_pred eccc----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 309 VFRY----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 309 ~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
+... .+.+.+++++++++.+.+. ...+.|++ +++.+|++.++++.. .|+||+
T Consensus 310 ~~~~~~~~~~~~~~~~~~l~~g~l~~~-~~~~~~~l--~~~~~a~~~~~~~~~-~k~~~~ 365 (365)
T cd08278 310 VIEGDSVPQEFIPRLIELYRQGKFPFD-KLVTFYPF--EDINQAIADSESGKV-IKPVLR 365 (365)
T ss_pred eecCCcChHHHHHHHHHHHHcCCCChH-HheEEecH--HHHHHHHHHHHCCCc-eEEEEC
Confidence 6432 3467889999999988432 23356777 999999999988754 588874
No 49
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=8.2e-41 Score=304.10 Aligned_cols=319 Identities=30% Similarity=0.474 Sum_probs=269.2
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (365)
|+++++.+++++++++++.|+++++||+|||.++++|+.|.....|.+ ..|.++|+|++|+|+++|++ +++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~------~~~~~~G~e~~G~Vv~~G~~---~~~ 71 (319)
T cd08242 1 MKALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYY------PFPGVPGHEFVGIVEEGPEA---ELV 71 (319)
T ss_pred CeeEEEeCCCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCC------CCCCccCceEEEEEEEeCCC---CCC
Confidence 578888888899999999999999999999999999999998887642 25778999999999999998 679
Q ss_pred CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhc
Q 017868 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177 (365)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~ 177 (365)
||||...+..+|++|.+|+.+.+++|++....+....+|+|++|+.+++++++++|+++++++++.+.++.+++.+++..
T Consensus 72 G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~~~~~~~~~ 151 (319)
T cd08242 72 GKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEILEQV 151 (319)
T ss_pred CCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhhhHHHHHHHHHHhc
Confidence 99999999999999999999999999987666543357999999999999999999999998888655556677767788
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868 178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 257 (365)
+++++++|||+|+|.+|++++| +++.+|++ +++++.++++.++++++|++.++++... ..+.++|
T Consensus 152 ~~~~g~~vlV~g~g~vg~~~~q-~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------------~~~~~~d 216 (319)
T cd08242 152 PITPGDKVAVLGDGKLGLLIAQ-VLALTGPD-VVLVGRHSEKLALARRLGVETVLPDEAE-------------SEGGGFD 216 (319)
T ss_pred CCCCCCEEEEECCCHHHHHHHH-HHHHcCCe-EEEEcCCHHHHHHHHHcCCcEEeCcccc-------------ccCCCCC
Confidence 8999999999988999999999 99999996 7788888999999999999877664210 1257899
Q ss_pred EEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCcHHHHHHHHHcCCCCCCCceEEE
Q 017868 258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHR 337 (365)
Q Consensus 258 ~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~ 337 (365)
+++|++|....+...++++.++|+++..+.......+....+..++.++.+.... .+++++++++++.+++.+.+++.
T Consensus 217 ~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~ 294 (319)
T cd08242 217 VVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCG--PFAPALRLLRKGLVDVDPLITAV 294 (319)
T ss_pred EEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecc--cHHHHHHHHHcCCCChhhceEEE
Confidence 9999999866888999999999999987654333344444566788888876432 38899999999999666668899
Q ss_pred ecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 338 FGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 338 ~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
|++ +++++|++.++++. .+|+||+.
T Consensus 295 ~~l--~~~~~a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 295 YPL--EEALEAFERAAEPG-ALKVLLRP 319 (319)
T ss_pred EeH--HHHHHHHHHHhcCC-ceEEEeCC
Confidence 998 99999999998765 58999863
No 50
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=9.8e-41 Score=306.41 Aligned_cols=329 Identities=30% Similarity=0.469 Sum_probs=265.7
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccC--------CccCCCCcccCccceEEEEEeC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA--------DFVVKEPMVIGHECAGVIEKVG 89 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~--------~~~~~~p~~~G~e~~G~V~~vG 89 (365)
||++++.++ .+++++++.|++.++||+|||.++++|+.|+....|.... .....+|.++|+|++|+|+++|
T Consensus 1 m~a~~~~~~-~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG 79 (341)
T cd08262 1 MRAAVFRDG-PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYG 79 (341)
T ss_pred CceEEEeCC-ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeC
Confidence 578888776 8999999999999999999999999999999988773210 0112357789999999999999
Q ss_pred CCCCC-CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhH
Q 017868 90 SEVKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS 168 (365)
Q Consensus 90 ~~v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~ 168 (365)
+++++ |++||+|++++..+|+.|+.|..+.. ....|+|+||+.++.+.++++|+++++++++...++.
T Consensus 80 ~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-----------~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~~~~~~~ 148 (341)
T cd08262 80 PGTERKLKVGTRVTSLPLLLCGQGASCGIGLS-----------PEAPGGYAEYMLLSEALLLRVPDGLSMEDAALTEPLA 148 (341)
T ss_pred CCCcCCCCCCCEEEecCCcCCCCChhhhCCCC-----------cCCCCceeeeEEechHHeEECCCCCCHHHhhhhhhHH
Confidence 99997 99999999999999999999943211 1246999999999999999999999999888556788
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcc--cHHHHHH
Q 017868 169 VGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ--DIAEEVE 246 (365)
Q Consensus 169 ~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~i~ 246 (365)
+||+++..+++++|++|||+|+|++|++++| +++.+|++.++++++++++.++++++|++.+++++.... .+. .+.
T Consensus 149 ~a~~~~~~~~~~~g~~VlI~g~g~vg~~~~~-la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~ 226 (341)
T cd08262 149 VGLHAVRRARLTPGEVALVIGCGPIGLAVIA-ALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AEL 226 (341)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHH
Confidence 8998887789999999999988999999999 999999988888888999999999999987777543211 121 222
Q ss_pred HHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHc
Q 017868 247 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRS 325 (365)
Q Consensus 247 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~ 325 (365)
.. ..+.++|++||++|....+..++++++++|+++.+|...............+++++.+.... .+.+.++++++++
T Consensus 227 ~~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (341)
T cd08262 227 AR--AGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAE 304 (341)
T ss_pred HH--hCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHc
Confidence 22 23568999999999755778899999999999999865332222222234577777766544 4578899999999
Q ss_pred CCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 326 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 326 g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
+.+.+.+.+.+.|++ +++++|++.++++...+|+|++
T Consensus 305 g~i~~~~~i~~~~~l--~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 305 GKVDVAPMVTGTVGL--DGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred CCCChHHheEEEeeH--HHHHHHHHHHhcCCCceEEEeC
Confidence 999655566788888 9999999999999999999975
No 51
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=1.2e-40 Score=309.88 Aligned_cols=335 Identities=30% Similarity=0.524 Sum_probs=271.2
Q ss_pred EEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCC----ccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868 21 AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD----FVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (365)
Q Consensus 21 ~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~----~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (365)
.++. ..++++.++|.|+++++||+|||.++++|++|+....+...+. ....+|.++|||++|+|+++|+++++|+
T Consensus 32 ~~~~-~~~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 110 (384)
T cd08265 32 KVWR-YPELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFE 110 (384)
T ss_pred EEEe-CCCEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCC
Confidence 3344 3579999999999999999999999999999998876321110 1134578999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCC-------CCcchhccchhhHH
Q 017868 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN-------VSLEEGAMCEPLSV 169 (365)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~-------~~~~~a~~~~~~~~ 169 (365)
+||+|++.+..+|+.|++|+.+++++|......+. ...|+|++|+.++++.++++|++ ++++.|+...++++
T Consensus 111 ~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~~a~~~~~~~t 189 (384)
T cd08265 111 KGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGF-SADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSV 189 (384)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCcceeee-cCCCcceeeEEechHHeEECCccccccccCCCHHHhhhhhHHHH
Confidence 99999999999999999999999999997765554 24699999999999999999986 45565555568889
Q ss_pred HHHHH-Hh-cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCC-cccHHHHHH
Q 017868 170 GLHAC-RR-ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-LQDIAEEVE 246 (365)
Q Consensus 170 a~~~~-~~-~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~ 246 (365)
||+++ .. +++++|++|||+|+|++|+++++ +++..|+.+++++++++++.++++++|++.++++.+. ..++.+.++
T Consensus 190 a~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~-lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~ 268 (384)
T cd08265 190 AYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIA-LAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVM 268 (384)
T ss_pred HHHHHHhhcCCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHH
Confidence 99998 34 68999999999988999999999 9999999778888888899999999999888765432 236666676
Q ss_pred HHHHHhCCCceEEEeCCCCH-HHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc--CCcHHHHHHHH
Q 017868 247 KIQKAMGTGIDVSFDCAGLN-KTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KNTWPLCLELL 323 (365)
Q Consensus 247 ~~~~~~~~~~d~vid~~g~~-~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~l 323 (365)
++.. +.++|+|+|++|.. ..+...+++|+++|+++.+|.......+....+..+..++.+.... ...+.++++++
T Consensus 269 ~~~~--g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll 346 (384)
T cd08265 269 EVTK--GWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLM 346 (384)
T ss_pred HhcC--CCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHH
Confidence 6543 67899999999963 4678899999999999999854333333344566677788877542 45799999999
Q ss_pred HcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868 324 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363 (365)
Q Consensus 324 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi 363 (365)
+++.+.+....++.|++ +++.+|++...++ ..+|+|+
T Consensus 347 ~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 347 ASGKIDMTKIITARFPL--EGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred HcCCCChHHheEEEeeH--HHHHHHHHHHhcC-CCceEEe
Confidence 99999544446788888 9999999996665 6788886
No 52
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=2.5e-40 Score=304.01 Aligned_cols=335 Identities=37% Similarity=0.656 Sum_probs=281.3
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (365)
|+++++.+.+.+.+++.+.|++.+++|+|||.++++|+.|+....|... +...|.++|+|++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~---~~~~~~~~g~~~~G~V~~~G~~v~~~~~ 77 (343)
T cd08235 1 MKAAVLHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT---DLKPPRILGHEIAGEIVEVGDGVTGFKV 77 (343)
T ss_pred CeEEEEecCCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc---cCCCCcccccceEEEEEeeCCCCCCCCC
Confidence 5788888888899999999999999999999999999999998876432 1344678999999999999999999999
Q ss_pred CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCc-----eEECCCCCCcchhccchhhHHHHH
Q 017868 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL-----CFKLPDNVSLEEGAMCEPLSVGLH 172 (365)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~-----~~~iP~~~~~~~a~~~~~~~~a~~ 172 (365)
||+|++.++..|++|++|..++.++|+...+.+. ...|+|++|+.+++++ ++++|+++++.+|+.+.++.+|++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~ 156 (343)
T cd08235 78 GDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGN-LYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCIN 156 (343)
T ss_pred CCEEEEccCCCCCCChHHHCcCcccCCCcceecc-CCCCcceeeEEecccccccccEEECCCCCCHHHHHhhhHHHHHHH
Confidence 9999999999999999999999999988765553 3569999999999998 999999999999887767888999
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868 173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 252 (365)
Q Consensus 173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~ 252 (365)
+++..++++|++|||+|+|.+|+++++ +++..|++.++++++++++.+.++++|++.+++++ ..++.+.+++...
T Consensus 157 ~l~~~~~~~g~~VlV~g~g~vg~~~~~-la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~~-- 231 (343)
T cd08235 157 AQRKAGIKPGDTVLVIGAGPIGLLHAM-LAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAA--EEDLVEKVRELTD-- 231 (343)
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCC--ccCHHHHHHHHhC--
Confidence 987678999999999988999999999 99999997578888889998888899998776643 3567676665532
Q ss_pred CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC--ccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCC
Q 017868 253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID 329 (365)
Q Consensus 253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~ 329 (365)
+.++|+++|+++....+...+++++++|+++.++..... ..........+++++.+.... ...+++++++++++.+.
T Consensus 232 ~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~ 311 (343)
T cd08235 232 GRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKID 311 (343)
T ss_pred CcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCCC
Confidence 567999999999766888999999999999998753322 223334567788888776554 56788999999999985
Q ss_pred CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 330 VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
+.+.+...|++ +++.+|++.+.+++ .+|+|++
T Consensus 312 ~~~~~~~~~~~--~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 312 VKDLITHRFPL--EDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred hHHheeeEeeH--HHHHHHHHHHhCCC-cEEEEeC
Confidence 43456677888 99999999999988 9999975
No 53
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=1.7e-40 Score=305.88 Aligned_cols=337 Identities=27% Similarity=0.420 Sum_probs=279.3
Q ss_pred ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccC---------CccCCCCcccCccceEEEEE
Q 017868 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA---------DFVVKEPMVIGHECAGVIEK 87 (365)
Q Consensus 18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~---------~~~~~~p~~~G~e~~G~V~~ 87 (365)
||++++..+ ..+++.++|.|++.++||+|||.++++|+.|+....|...- .....+|.++|+|++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 577777754 45899999999999999999999999999999988764210 00123467899999999999
Q ss_pred eCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-h
Q 017868 88 VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-P 166 (365)
Q Consensus 88 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~ 166 (365)
+|++++++++||+|++++...|++|..|+++..++|.+....+. ...|++++|+.++.++++++|+++++.+++.+. .
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~ 159 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGI-FQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACS 159 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceee-eccCcceeeEEecHHHeeeCCCCCCHHHeehhhch
Confidence 99999999999999999999999999999999999988766654 257999999999999999999999999988775 7
Q ss_pred hHHHHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHH
Q 017868 167 LSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEV 245 (365)
Q Consensus 167 ~~~a~~~~~~-~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i 245 (365)
+.+||++++. ..++++++|||+|+|.+|++++| +++..|+++++++++++++.+.++++|++.+++. ...++.+.+
T Consensus 160 ~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~-~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~ 236 (350)
T cd08240 160 GLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALA-LLKALGPANIIVVDIDEAKLEAAKAAGADVVVNG--SDPDAAKRI 236 (350)
T ss_pred hhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHH-HHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecC--CCccHHHHH
Confidence 7899999865 44568999999988999999999 9999999878888889999999999999776653 334555555
Q ss_pred HHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHH
Q 017868 246 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLR 324 (365)
Q Consensus 246 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~ 324 (365)
.+.. ++++|++||++|....+..++++|+++|+++.+|..............+++.++.+.... .+++.+++++++
T Consensus 237 ~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~ 313 (350)
T cd08240 237 IKAA---GGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAK 313 (350)
T ss_pred HHHh---CCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHH
Confidence 5443 338999999999767889999999999999998865443334444566788888887655 467889999999
Q ss_pred cCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 325 SGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 325 ~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
++.+. +...+.|++ +++++|++.+.++...||++++.
T Consensus 314 ~~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 314 AGKLK--PIPLTERPL--SDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred cCCCc--cceeeEEcH--HHHHHHHHHHHcCCccceEEecC
Confidence 99984 445677888 99999999999998899999863
No 54
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=2.8e-40 Score=305.54 Aligned_cols=334 Identities=33% Similarity=0.522 Sum_probs=273.7
Q ss_pred ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (365)
Q Consensus 18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (365)
|+++++..+ +.+++.++|.|++.++||+|+|.++++|+.|+....|... ..+|.++|+|++|+|+++|++++.|+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP----APLPAVLGHEGAGVVEEVGPGVTGVK 76 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC----CCCCccccccceEEEEEeCCCccccC
Confidence 578888875 6889999999999999999999999999999988876432 34577899999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCcccc---------------cc----CCCCcceeeEEeecCCceEECCCCCC
Q 017868 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFF---------------AT----PPVHGSLANQVVHPADLCFKLPDNVS 157 (365)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~g~~~~~~~v~~~~~~~iP~~~~ 157 (365)
+||+|++.+...|++|.+|++++.++|.+...+ +. ....|+|++|+.++++.++++|++++
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~ 156 (363)
T cd08279 77 PGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP 156 (363)
T ss_pred CCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence 999999999999999999999999999865321 00 02358999999999999999999999
Q ss_pred cchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCC
Q 017868 158 LEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 235 (365)
Q Consensus 158 ~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~ 235 (365)
+++++.++ .+.+||+++ +..++.++++|||+|+|.+|+++++ +++..|+++++++++++++.++++++|++++++.+
T Consensus 157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~-lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~ 235 (363)
T cd08279 157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQ-GARIAGASRIIAVDPVPEKLELARRFGATHTVNAS 235 (363)
T ss_pred hHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCC
Confidence 99988886 678888886 5688999999999988999999999 99999997688888899999999999998776643
Q ss_pred CCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC--CccccchHhhhcCcEEEeecc--
Q 017868 236 TNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFR-- 311 (365)
Q Consensus 236 ~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~--~~~~~~~~~~~~~~~i~~~~~-- 311 (365)
..++...++++.. +.++|+++|+++....+...+++++++|+++.++.... ...+....+..+...+.+...
T Consensus 236 --~~~~~~~l~~~~~--~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (363)
T cd08279 236 --EDDAVEAVRDLTD--GRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGS 311 (363)
T ss_pred --CccHHHHHHHHcC--CCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecC
Confidence 3466666665532 57899999999976688899999999999999975432 233444445556666666532
Q ss_pred --cCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEE
Q 017868 312 --YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVM 362 (365)
Q Consensus 312 --~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~v 362 (365)
....+++++++++++.+.+.+.+.+.|++ +++++|++.+++++..+.++
T Consensus 312 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 312 ANPRRDIPRLLDLYRAGRLKLDELVTRRYSL--DEINEAFADMLAGENARGVI 362 (363)
T ss_pred cCcHHHHHHHHHHHHcCCCCcceeEEEEEcH--HHHHHHHHHHhcCCceeEEe
Confidence 25678899999999998544456778888 99999999998886654444
No 55
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=6.7e-40 Score=300.36 Aligned_cols=335 Identities=37% Similarity=0.649 Sum_probs=276.7
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (365)
|+++++..++.+++.+.+.|++.++||+|+|.++++|+.|+....+.... ..+|.++|+|++|+|+++|++++.|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~~ 77 (337)
T cd08261 1 MKALVCEKPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPF---ASYPRILGHELSGEVVEVGEGVAGLKV 77 (337)
T ss_pred CeEEEEeCCCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCc---CCCCcccccccEEEEEEeCCCCCCCCC
Confidence 57888888889999999999999999999999999999999988764322 234778999999999999999999999
Q ss_pred CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhc
Q 017868 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177 (365)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~ 177 (365)
||+|++.+..+|+.|..|..+.++.|......+. ...|+|++|+.++++ ++++|+++++++++.++.+.+++++++..
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~~~~~~a~~~~~~~ 155 (337)
T cd08261 78 GDRVVVDPYISCGECYACRKGRPNCCENLQVLGV-HRDGGFAEYIVVPAD-ALLVPEGLSLDQAALVEPLAIGAHAVRRA 155 (337)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCeeee-cCCCcceeEEEechh-eEECCCCCCHHHhhhhchHHHHHHHHHhc
Confidence 9999999888999999999999999964322222 246999999999999 99999999999998777777888888778
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868 178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 257 (365)
++.+|++|||+|+|.+|++++| +++.+|++ ++++.+++++.++++++|+++++++.. .++.+.+.+... +.++|
T Consensus 156 ~l~~g~~vLI~g~g~vG~~a~~-lA~~~g~~-v~~~~~s~~~~~~~~~~g~~~v~~~~~--~~~~~~l~~~~~--~~~vd 229 (337)
T cd08261 156 GVTAGDTVLVVGAGPIGLGVIQ-VAKARGAR-VIVVDIDDERLEFARELGADDTINVGD--EDVAARLRELTD--GEGAD 229 (337)
T ss_pred CCCCCCEEEEECCCHHHHHHHH-HHHHcCCe-EEEECCCHHHHHHHHHhCCCEEecCcc--cCHHHHHHHHhC--CCCCC
Confidence 8999999999988999999999 99999995 677777899999999999988877543 456666665532 56799
Q ss_pred EEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCceEE
Q 017868 258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTH 336 (365)
Q Consensus 258 ~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~ 336 (365)
+++|++|....+..++++|+++|+++.++............+..+++++.+.... .+.+++++++++++.+.+.+....
T Consensus 230 ~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~ 309 (337)
T cd08261 230 VVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITH 309 (337)
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEE
Confidence 9999998777888999999999999998754433333333455677777765433 457889999999999954225677
Q ss_pred EecCChhhHHHHHHHHhcC-CCceEEEEeC
Q 017868 337 RFGFSQKEVEEAFETSARG-GTAIKVMFNL 365 (365)
Q Consensus 337 ~~~~~~~~~~~a~~~~~~~-~~~gk~vi~~ 365 (365)
.+++ +++.+|++.+.++ ...+|+|+++
T Consensus 310 ~~~~--~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 310 RFPF--EDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred EeeH--HHHHHHHHHHhcCCCceEEEEEeC
Confidence 8888 9999999999988 5889999975
No 56
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=6.2e-40 Score=301.59 Aligned_cols=334 Identities=28% Similarity=0.484 Sum_probs=275.0
Q ss_pred ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (365)
|+++++.+++.+++.+.|.|.| +++||+||+.++++|++|+....|.+. ...|.++|||++|+|+++|+++++++
T Consensus 1 m~~~~~~~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (345)
T cd08287 1 MRATVIHGPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP----TRAPAPIGHEFVGVVEEVGSEVTSVK 76 (345)
T ss_pred CceeEEecCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC----CCCCcccccceEEEEEEeCCCCCccC
Confidence 5788999888999999999996 999999999999999999988876432 23478999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCC--ceEECCCCCCcchhccc------hhhH
Q 017868 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMC------EPLS 168 (365)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~a~~~------~~~~ 168 (365)
+||+|++....+|+.|.+|..+..+.|.+...++. ..+|+|++|+.++.+ .++++|++++++.+... ..+.
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~ 155 (345)
T cd08287 77 PGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGA-FVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMG 155 (345)
T ss_pred CCCEEEeccccCCCCChhhhCcCcccCCCCCcccC-CCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHH
Confidence 99999986677899999999999999987766553 467999999999974 99999999988322211 3567
Q ss_pred HHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHH
Q 017868 169 VGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 248 (365)
Q Consensus 169 ~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~ 248 (365)
+|++++..+++++|++|+|.|+|.+|+++++ +++..|+++++++++++++.++++++|++.++++.. .++.+.+.+.
T Consensus 156 ~a~~~~~~~~~~~g~~vlI~g~g~vg~~~~~-lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~--~~~~~~i~~~ 232 (345)
T cd08287 156 TGHHAAVSAGVRPGSTVVVVGDGAVGLCAVL-AAKRLGAERIIAMSRHEDRQALAREFGATDIVAERG--EEAVARVREL 232 (345)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc--ccHHHHHHHh
Confidence 8888887788999999999888999999999 999999987899988888999999999988877543 4566666554
Q ss_pred HHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCC
Q 017868 249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGK 327 (365)
Q Consensus 249 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~ 327 (365)
. .+.++|+++|++|....+..++++++++|+++.++.......++......+++++.+.... .+.++++++++.++.
T Consensus 233 ~--~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (345)
T cd08287 233 T--GGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLAGR 310 (345)
T ss_pred c--CCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHcCC
Confidence 3 2568999999998877889999999999999998765433333433456788888775443 567899999999999
Q ss_pred CCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 328 IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
+.+.+.+++.+++ +++++|++.+..+.. .|++|+
T Consensus 311 l~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~k~~~~ 344 (345)
T cd08287 311 INPGRVFDLTLPL--DEVAEGYRAMDERRA-IKVLLR 344 (345)
T ss_pred CCHHHhEEeeecH--HHHHHHHHHHhCCCc-eEEEeC
Confidence 8544456788888 999999999887654 499986
No 57
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=8.2e-40 Score=302.97 Aligned_cols=336 Identities=31% Similarity=0.520 Sum_probs=278.2
Q ss_pred ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC--
Q 017868 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT-- 94 (365)
Q Consensus 18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~-- 94 (365)
|+++++..+ .++++.+.|.|.++++||+||+.++++|+.|+....+.+. ..+|.++|+|++|+|+.+|+++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~----~~~p~~~g~e~~G~v~~vG~~~~~~~ 76 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP----FPPPFVLGHEISGEVVEVGPNVENPY 76 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC----CCCCcccccccceEEEEeCCCCCCCC
Confidence 567788765 5789999999999999999999999999999998876432 356789999999999999999988
Q ss_pred -CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC---------------------CCCcceeeEEeecCCceEEC
Q 017868 95 -LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------------PVHGSLANQVVHPADLCFKL 152 (365)
Q Consensus 95 -~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~g~~~~~~~v~~~~~~~i 152 (365)
|++||+|++.+..+|+.|.+|..+..++|++..++... ...|+|++|+.++.+.++++
T Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (367)
T cd08263 77 GLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPL 156 (367)
T ss_pred cCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEEC
Confidence 99999999999999999999999999999976422110 13589999999999999999
Q ss_pred CCCCCcchhccch-hhHHHHHHHH-hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE
Q 017868 153 PDNVSLEEGAMCE-PLSVGLHACR-RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADN 230 (365)
Q Consensus 153 P~~~~~~~a~~~~-~~~~a~~~~~-~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~ 230 (365)
|+++++.+++.++ .+.+||+++. ...+.++++|||+|+|.+|+++++ +++..|+++++++++++++.++++++|++.
T Consensus 157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~-lak~~G~~~vi~~~~s~~~~~~~~~~g~~~ 235 (367)
T cd08263 157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQ-LAKAFGASPIIAVDVRDEKLAKAKELGATH 235 (367)
T ss_pred CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHH-HHHHcCCCeEEEEeCCHHHHHHHHHhCCce
Confidence 9999999998886 7889999984 567899999999988999999999 999999976888888899999999999988
Q ss_pred EEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC--CccccchHhhhcCcEEEe
Q 017868 231 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVG 308 (365)
Q Consensus 231 ~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~--~~~~~~~~~~~~~~~i~~ 308 (365)
+++.+ ..++.+.++.... +.++|++||++++......++++++++|+++.++.... ...+....+..+++++.+
T Consensus 236 v~~~~--~~~~~~~l~~~~~--~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 311 (367)
T cd08263 236 TVNAA--KEDAVAAIREITG--GRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIG 311 (367)
T ss_pred EecCC--cccHHHHHHHHhC--CCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEe
Confidence 77753 3466666665532 57899999999976577889999999999999975432 223333344467888877
Q ss_pred eccc--CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 309 VFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 309 ~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
+... .+.+++++++++++.+.+.+.+++.|++ +++.+|++.++++...||+|++
T Consensus 312 ~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 312 SYGARPRQDLPELVGLAASGKLDPEALVTHKYKL--EEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred cCCCCcHHHHHHHHHHHHcCCCCcccceeEEecH--HHHHHHHHHHhcCCccceeeeC
Confidence 6543 3578899999999998644456788888 9999999999999889999984
No 58
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=5e-40 Score=307.20 Aligned_cols=342 Identities=21% Similarity=0.243 Sum_probs=274.6
Q ss_pred hhcceeEEEec-----C-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCC------c-cCCCC-cccCcc
Q 017868 15 EEVNMAAWLLG-----V-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCAD------F-VVKEP-MVIGHE 80 (365)
Q Consensus 15 ~~~~~~~~~~~-----~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~------~-~~~~p-~~~G~e 80 (365)
+.+|+|+++.. + +.+++.+.|.|.+.++||+||+.++++|..|.....+..... + ....| .++|||
T Consensus 5 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e 84 (398)
T TIGR01751 5 PETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSD 84 (398)
T ss_pred chhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccc
Confidence 45688888843 1 469999999999999999999999999999987665432100 0 01223 379999
Q ss_pred ceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcch
Q 017868 81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE 160 (365)
Q Consensus 81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~ 160 (365)
++|+|+++|++++.|++||+|++.+...|++|++|..+++++|.....++....+|+|+||+.+++++++++|+++++++
T Consensus 85 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~ 164 (398)
T TIGR01751 85 ASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEE 164 (398)
T ss_pred eEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHH
Confidence 99999999999999999999999999999999999999999998776666655689999999999999999999999999
Q ss_pred hccch-hhHHHHHHHH---hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCC
Q 017868 161 GAMCE-PLSVGLHACR---RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS 235 (365)
Q Consensus 161 a~~~~-~~~~a~~~~~---~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~ 235 (365)
++.+. ...+||+++. ..++.+|++|||+|+ |.+|+++++ +++.+|++ ++++++++++.++++++|++.+++..
T Consensus 165 aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~-~ak~~G~~-vi~~~~~~~~~~~~~~~g~~~~v~~~ 242 (398)
T TIGR01751 165 AACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQ-LARAGGGN-PVAVVSSPEKAEYCRELGAEAVIDRN 242 (398)
T ss_pred HhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHH-HHHHcCCe-EEEEcCCHHHHHHHHHcCCCEEecCC
Confidence 88776 7888998874 377899999999997 999999999 99999995 56666888899999999999888754
Q ss_pred CCc--------------------ccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccc
Q 017868 236 TNL--------------------QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTV 294 (365)
Q Consensus 236 ~~~--------------------~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~ 294 (365)
... ..+...+.+++ .++++|++|||+|. ..+...+++++++|+++.+|..... ..+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~d~vld~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~ 319 (398)
T TIGR01751 243 DFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELT--GGEDPDIVFEHPGR-ATFPTSVFVCRRGGMVVICGGTTGYNHDY 319 (398)
T ss_pred CcchhhccccccccccchhhhcchhHHHHHHHHc--CCCCceEEEECCcH-HHHHHHHHhhccCCEEEEEccccCCCCCc
Confidence 310 11223333332 25689999999996 5788899999999999999864332 334
Q ss_pred cchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 295 PLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 295 ~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+...+..++.++.+.... .+.+++++++++++.+ .+.+++++++ +++.++++.+.++...||+|+++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~ 387 (398)
T TIGR01751 320 DNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRI--DPTLSKVYPL--EEIGQAHQDVHRNHHQGNVAVLV 387 (398)
T ss_pred CHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCc--ccceeeEEcH--HHHHHHHHHHHcCCCCceEEEEe
Confidence 444556677777776533 3457889999999988 4557788888 99999999999999999999864
No 59
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=1.4e-39 Score=299.19 Aligned_cols=335 Identities=30% Similarity=0.474 Sum_probs=277.6
Q ss_pred ceeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868 18 NMAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (365)
Q Consensus 18 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (365)
||++++.++ .++++.+.+.|.+.++||+||+.++++|+.|+....|.... ..+|.++|+|++|+|+.+|++++.|+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~~~~~~ 77 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD---VTLPHVPGHEFAGVVVEVGEDVSRWR 77 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC---CCCCeeeccceeEEEEEECCCCccCC
Confidence 578888764 46899999999999999999999999999999988775332 34578999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCC--ceEECCCCCCcchhccch-hhHHHHHH
Q 017868 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD--LCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (365)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~a~~~~-~~~~a~~~ 173 (365)
+||+|++.+..+|++|++|+.+..++|.++...+.. ..|+|++|+.+++. +++++|+++++++++.++ ...+||++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~ 156 (345)
T cd08260 78 VGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFT-HPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRA 156 (345)
T ss_pred CCCEEEECCCCCCCCCccccCcCcccCCCCcccccC-CCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHH
Confidence 999999877788999999999999999987443332 46999999999974 899999999999888776 78899999
Q ss_pred H-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868 174 C-RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 252 (365)
Q Consensus 174 ~-~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~ 252 (365)
+ +.+++.++++|+|+|+|.+|+++++ +++..|+ .++++++++++.+.++++|++.++++++ ..++...+..+.
T Consensus 157 l~~~~~~~~~~~vlV~g~g~vg~~~~~-~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~~~--- 230 (345)
T cd08260 157 LVHQARVKPGEWVAVHGCGGVGLSAVM-IASALGA-RVIAVDIDDDKLELARELGAVATVNASE-VEDVAAAVRDLT--- 230 (345)
T ss_pred HHHccCCCCCCEEEEECCCHHHHHHHH-HHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc-chhHHHHHHHHh---
Confidence 7 5678999999999999999999999 9999999 5777778889999999999988877532 145656665543
Q ss_pred CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC---ccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCC
Q 017868 253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE---MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKI 328 (365)
Q Consensus 253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~---~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~ 328 (365)
++++|++||++|........+++++++|+++.+|..... ..++...+..+++++.+.... .+.+++++++++++.+
T Consensus 231 ~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i 310 (345)
T cd08260 231 GGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKL 310 (345)
T ss_pred CCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCC
Confidence 238999999999766888999999999999999854322 233334455778888886544 5678999999999998
Q ss_pred CCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 329 DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
...+.+.+.+++ +++++|++.+.++...+|+|++
T Consensus 311 ~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 311 DPEPLVGRTISL--DEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred ChhhheeEEecH--HHHHHHHHHHHcCCCCceEEec
Confidence 544446778888 9999999999999999999875
No 60
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=2.5e-39 Score=300.30 Aligned_cols=334 Identities=27% Similarity=0.421 Sum_probs=270.1
Q ss_pred ceeEEEecCCceEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (365)
|+++++.++++++++++|+|++ +++||+|||.++++|+.|++...|... ...|.++|||++|+|+++|++++.++
T Consensus 1 m~~~~~~~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~----~~~p~~~g~e~~G~V~~vG~~v~~~~ 76 (375)
T cd08282 1 MKAVVYGGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG----AEPGLVLGHEAMGEVEEVGSAVESLK 76 (375)
T ss_pred CceEEEecCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC----CCCCceeccccEEEEEEeCCCCCcCC
Confidence 4677788888999999999996 799999999999999999998876532 34588999999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccc---------cccCCCCcceeeEEeecCC--ceEECCCCCCcch---hc
Q 017868 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKF---------FATPPVHGSLANQVVHPAD--LCFKLPDNVSLEE---GA 162 (365)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~v~~~--~~~~iP~~~~~~~---a~ 162 (365)
+||+|+..+..+|+.|..|..++.++|.+..+ .+....+|+|+||+.++.. .++++|+++++++ ++
T Consensus 77 ~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a 156 (375)
T cd08282 77 VGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYL 156 (375)
T ss_pred CCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhhee
Confidence 99999999999999999999999999975321 1122346999999999975 8999999999984 45
Q ss_pred cch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccH
Q 017868 163 MCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDI 241 (365)
Q Consensus 163 ~~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
.+. .+.+||+++..+++++|++|||.|+|.+|++++| +++..|+..++++++++++.++++++|+. .+++ ..+++
T Consensus 157 ~~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vg~~~~~-~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~--~~~~~ 232 (375)
T cd08282 157 MLSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAY-SAILRGASRVYVVDHVPERLDLAESIGAI-PIDF--SDGDP 232 (375)
T ss_pred eecchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHcCCe-Eecc--CcccH
Confidence 444 7889999997788999999999988999999999 99999986678898999999999999984 4443 23566
Q ss_pred HHHHHHHHHHhCCCceEEEeCCCCHH-----------HHHHHHHhcccCCEEEEEccCCCC-------------ccccch
Q 017868 242 AEEVEKIQKAMGTGIDVSFDCAGLNK-----------TMSTALGATCAGGKVCLVGMGHHE-------------MTVPLT 297 (365)
Q Consensus 242 ~~~i~~~~~~~~~~~d~vid~~g~~~-----------~~~~~~~~l~~~G~~~~~g~~~~~-------------~~~~~~ 297 (365)
.+.+.+.. ++++|+++||+|... .+..++++++++|+++..|..... ..+...
T Consensus 233 ~~~i~~~~---~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 309 (375)
T cd08282 233 VEQILGLE---PGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFG 309 (375)
T ss_pred HHHHHHhh---CCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHH
Confidence 66666543 367999999998652 478899999999999887643211 122333
Q ss_pred HhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 298 PAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 298 ~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
.+..++..+.+.... .+.+.+++++++++.+.+...+++.|++ +++++|++.+.++. .+|+|++.
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~-~~kvvv~~ 375 (375)
T cd08282 310 LLWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISL--EDAPEAYARFDKRL-ETKVVIKP 375 (375)
T ss_pred HHHhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeH--HHHHHHHHHHhcCC-ceEEEeCC
Confidence 455566666665443 5678889999999999544457899988 99999999999887 89999863
No 61
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=2.2e-39 Score=297.67 Aligned_cols=333 Identities=38% Similarity=0.659 Sum_probs=276.4
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (365)
|+|+++.+.+.+.+++.++|++.++||+||+.++++|+.|+....+.. ....|.++|+|++|+|+.+|++++.|++
T Consensus 1 ~~a~~~~~~~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~----~~~~~~~~g~~~~G~V~~~g~~v~~~~~ 76 (343)
T cd08236 1 MKALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG----AYHPPLVLGHEFSGTVEEVGSGVDDLAV 76 (343)
T ss_pred CeeEEEecCCceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC----CCCCCcccCcceEEEEEEECCCCCcCCC
Confidence 578888888889999999999999999999999999999998877642 2345778999999999999999999999
Q ss_pred CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhc
Q 017868 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177 (365)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~ 177 (365)
||+|++++...|+.|.+|..+....|++..+.+. ...|+|++|+.++++.++++|+++++++++.++++.+||+++...
T Consensus 77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~~ta~~~l~~~ 155 (343)
T cd08236 77 GDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGS-RRDGAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALHAVRLA 155 (343)
T ss_pred CCEEEEcCCCCCCCChhHHCcChhhCCCcceEec-ccCCcccceEEechHHeEECcCCCCHHHHHhcchHHHHHHHHHhc
Confidence 9999999888999999999999999988766654 367999999999999999999999999988887778999998778
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868 178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 257 (365)
+++++++|||+|+|.+|+++++ +++.+|++.++++++++++.++++++|++.++++.. .. ...++... .+.++|
T Consensus 156 ~~~~~~~vlI~g~g~~g~~~~~-lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~--~~-~~~~~~~~--~~~~~d 229 (343)
T cd08236 156 GITLGDTVVVIGAGTIGLLAIQ-WLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE--ED-VEKVRELT--EGRGAD 229 (343)
T ss_pred CCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc--cc-HHHHHHHh--CCCCCC
Confidence 8999999999988999999999 999999965888888888889999999988776543 33 45555443 256799
Q ss_pred EEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccc---cchHhhhcCcEEEeeccc------CCcHHHHHHHHHcCCC
Q 017868 258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV---PLTPAAVREVDVVGVFRY------KNTWPLCLELLRSGKI 328 (365)
Q Consensus 258 ~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~---~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~g~~ 328 (365)
+++||+|....+..++++|+++|+++.+|.......+ ....+..++..+.+.... .+.+++++++++++.+
T Consensus 230 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 309 (343)
T cd08236 230 LVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKI 309 (343)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCC
Confidence 9999998777888999999999999999854332111 223345677777776432 4568889999999988
Q ss_pred CCCCceEEEecCChhhHHHHHHHHhc-CCCceEEEE
Q 017868 329 DVKPLVTHRFGFSQKEVEEAFETSAR-GGTAIKVMF 363 (365)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~gk~vi 363 (365)
.+.+...+.+++ ++++++++.+.+ ....+|+|+
T Consensus 310 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 310 KVEPLITHRLPL--EDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred ChHHheeeeecH--HHHHHHHHHHHcCCCCeeEEeC
Confidence 533456677888 999999999998 677888875
No 62
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=1.4e-39 Score=298.09 Aligned_cols=326 Identities=25% Similarity=0.401 Sum_probs=270.0
Q ss_pred eEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCC
Q 017868 20 AAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPG 98 (365)
Q Consensus 20 ~~~~~~-~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 98 (365)
+.+.+. .++|++.+++.|++.++||+|||.++++|+.|+....|... ...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (337)
T cd05283 2 GYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG---PTKYPLVPGHEIVGIVVAVGSKVTKFKVG 78 (337)
T ss_pred ceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcC---CCCCCcccCcceeeEEEEECCCCcccCCC
Confidence 344443 37999999999999999999999999999999998887542 23458899999999999999999999999
Q ss_pred CEEE-EcCCcCCCCCccccCCCCCCCCCccccc------cCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHH
Q 017868 99 DRVA-LEPGISCWRCDHCKGGRYNLCPEMKFFA------TPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG 170 (365)
Q Consensus 99 d~V~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a 170 (365)
|+|+ .....+|++|.+|..+..++|+...+.+ .....|+|+||+.++++.++++|+++++++++.+. ...+|
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta 158 (337)
T cd05283 79 DRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITV 158 (337)
T ss_pred CEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHH
Confidence 9997 5556689999999999999998866542 12346999999999999999999999999888775 67889
Q ss_pred HHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868 171 LHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 171 ~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
|++++...+++|++++|.|+|.+|+++++ +++..|+ .++.+++++++.++++++|++.+++... .++ .+.
T Consensus 159 ~~~~~~~~~~~g~~vlV~g~g~vG~~~~~-~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~---~~~--- 228 (337)
T cd05283 159 YSPLKRNGVGPGKRVGVVGIGGLGHLAVK-FAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD--PEA---MKK--- 228 (337)
T ss_pred HHHHHhcCCCCCCEEEEECCcHHHHHHHH-HHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc--hhh---hhh---
Confidence 99987777899999999888999999999 9999999 6788888889999999999888776432 222 111
Q ss_pred HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCC
Q 017868 251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID 329 (365)
Q Consensus 251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~ 329 (365)
.+.++|+++||+|.......++++++++|+++.+|.......++...+..+++++.+.... .+.+++++++++++.+
T Consensus 229 -~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l- 306 (337)
T cd05283 229 -AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGI- 306 (337)
T ss_pred -ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCC-
Confidence 2578999999999765678999999999999999865433344445556789999987755 5678899999999998
Q ss_pred CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 330 VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
.+.+ +.|++ +++++|++.+.+++..||+|++
T Consensus 307 -~~~~-~~~~~--~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 307 -KPWV-EVIPM--DGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred -ccce-EEEEH--HHHHHHHHHHHcCCCcceEeeC
Confidence 3443 67888 9999999999999999999874
No 63
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=2.6e-39 Score=296.86 Aligned_cols=337 Identities=32% Similarity=0.556 Sum_probs=272.6
Q ss_pred ceeEEEecCC-ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868 18 NMAAWLLGVN-TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (365)
Q Consensus 18 ~~~~~~~~~~-~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (365)
||++++..++ .+++.+.+.|.|.++|++|||.++++|+.|+....+..........|.++|+|++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 4677777554 699999999999999999999999999999887543211111134577899999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHh
Q 017868 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR 176 (365)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~ 176 (365)
+||+|++.+..+|+.|.+|..+++++|+...+.+. ...|+|++|++++++.++++|+++++++++...++.++++++.
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~a~~~~~~~~a~~~~~- 158 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGV-DTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTVL- 158 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccceEec-cCCCcceEEEEechHHcEECcCCCCHHHhhhhhHHHHHHHHHH-
Confidence 99999999889999999999999999987655554 3569999999999999999999999877766668888888765
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868 177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 256 (365)
...++|++|||+|+|.+|+++++ +++.+|++++++++++++|.++++++|++++++++ ..++. .+++... ++++
T Consensus 159 ~~~~~g~~vlV~g~g~vg~~~~~-la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~-~~~~~~~--~~~v 232 (341)
T cd05281 159 AGDVSGKSVLITGCGPIGLMAIA-VAKAAGASLVIASDPNPYRLELAKKMGADVVINPR--EEDVV-EVKSVTD--GTGV 232 (341)
T ss_pred hcCCCCCEEEEECCCHHHHHHHH-HHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc--cccHH-HHHHHcC--CCCC
Confidence 34578999999988999999999 99999986677888889999999999998776643 34555 5555432 5789
Q ss_pred eEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccc-hHhhhcCcEEEeeccc--CCcHHHHHHHHHcCCCCCCCc
Q 017868 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPL-TPAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKPL 333 (365)
Q Consensus 257 d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~~~~~ 333 (365)
|++||++|.......++++|+++|+++.+|.......... .....+++++.+.... .+.+.+++++++++.+.+.+.
T Consensus 233 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 312 (341)
T cd05281 233 DVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPV 312 (341)
T ss_pred CEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHh
Confidence 9999999887788899999999999999875433222222 2356677777765532 456788999999999865556
Q ss_pred eEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 334 VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 334 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+.+.+++ +++.+|++.+.++. .||+|++.
T Consensus 313 ~~~~~~~--~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 313 ITHKLPL--EDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred eEEEecH--HHHHHHHHHHhcCC-CceEEecC
Confidence 6777888 99999999999988 99999863
No 64
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=7e-40 Score=298.49 Aligned_cols=305 Identities=21% Similarity=0.272 Sum_probs=246.3
Q ss_pred ceeEEEecCC------ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCC
Q 017868 18 NMAAWLLGVN------TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE 91 (365)
Q Consensus 18 ~~~~~~~~~~------~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 91 (365)
|+++++.+++ .+++.++|.|.|+++||+|||.++++|+.|+....|.+.. ...+|.++|||++|+|+++|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~--~~~~p~v~G~e~~G~V~~vG~~ 78 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS--TKALPVPPGFEGSGTVVAAGGG 78 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCcCCCcceEEEEEEECCC
Confidence 5778877543 5888899999999999999999999999999988775322 1346889999999999999999
Q ss_pred CCC-CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHH
Q 017868 92 VKT-LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV 169 (365)
Q Consensus 92 v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~ 169 (365)
+++ |++||+|++.+. .+|+|+||+.++++.++++|+++++++++.++ ...|
T Consensus 79 v~~~~~vGd~V~~~~~---------------------------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~t 131 (324)
T cd08291 79 PLAQSLIGKRVAFLAG---------------------------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLT 131 (324)
T ss_pred ccccCCCCCEEEecCC---------------------------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHH
Confidence 996 999999987521 14899999999999999999999999988654 5667
Q ss_pred HHHHHHhcCCCCCCEEEEE-c-CCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 017868 170 GLHACRRANIGPETNVLIM-G-AGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 247 (365)
Q Consensus 170 a~~~~~~~~~~~g~~vlI~-G-~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~ 247 (365)
||.+++..+. ++++++|+ | +|++|++++| +++.+|+ .++++++++++.++++++|+++++++.. .++.+.+++
T Consensus 132 a~~~~~~~~~-~~~~vlv~~~g~g~vG~~a~q-~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~v~~ 206 (324)
T cd08291 132 ALGMLETARE-EGAKAVVHTAAASALGRMLVR-LCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSD--PDFLEDLKE 206 (324)
T ss_pred HHHHHHhhcc-CCCcEEEEccCccHHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC--ccHHHHHHH
Confidence 7755555555 56667665 4 5999999999 9999999 5788888999999999999999887543 577777776
Q ss_pred HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-c-cccchHhhhcCcEEEeeccc-------CCcHHH
Q 017868 248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-M-TVPLTPAAVREVDVVGVFRY-------KNTWPL 318 (365)
Q Consensus 248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~-~~~~~~~~~~~~~i~~~~~~-------~~~~~~ 318 (365)
.+. +.++|++||++|.. .....+.+++++|+++.+|..... . .++...+..+++++.+++.. .+.+++
T Consensus 207 ~~~--~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (324)
T cd08291 207 LIA--KLNATIFFDAVGGG-LTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKK 283 (324)
T ss_pred HhC--CCCCcEEEECCCcH-HHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHH
Confidence 643 56899999999976 567789999999999999854322 1 23344567788888887643 235778
Q ss_pred HHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 319 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 319 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
++++++ +.+ ++.++++|+| +++.+|++.+.++...||+++.
T Consensus 284 ~~~~~~-~~~--~~~i~~~~~l--~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 284 LKKLVK-TEL--KTTFASRYPL--ALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred HHHHHh-Ccc--ccceeeEEcH--HHHHHHHHHHHhCCCCCeEEeC
Confidence 888887 766 7788899999 9999999999999899999873
No 65
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=3.8e-39 Score=295.05 Aligned_cols=331 Identities=37% Similarity=0.610 Sum_probs=276.5
Q ss_pred ceeEEEecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (365)
||++++.+++.+++.+.+.|++.++||+|||.++++|+.|+....|... ..+|.++|+|++|+|+.+|++++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~----~~~p~~~g~~~~G~v~~vG~~v~~~~~ 76 (334)
T cd08234 1 MKALVYEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFG----AAPPLVPGHEFAGVVVAVGSKVTGFKV 76 (334)
T ss_pred CeeEEecCCCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCC----CCCCcccccceEEEEEEeCCCCCCCCC
Confidence 5788888888999999999999999999999999999999998876532 236789999999999999999999999
Q ss_pred CCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhc
Q 017868 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177 (365)
Q Consensus 98 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~ 177 (365)
||+|++.+...|+.|.+|..+++++|+.....+. ...|+|++|+.+++++++++|+++++.+++.+.++.+++++++.+
T Consensus 77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~ 155 (334)
T cd08234 77 GDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGV-TRNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLL 155 (334)
T ss_pred CCEEEEcCCcCCCCCccccCcChhhCCCcceecc-CCCCcceeEEEecHHHcEECcCCCCHHHHhhhhHHHHHHHHHHhc
Confidence 9999999999999999999999999998765433 246999999999999999999999999988766777888888778
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868 178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 257 (365)
++++|++|||+|+|.+|+++++ +++..|+++++++++++++.+.++++|++.++++.. .++... + ...++++|
T Consensus 156 ~~~~g~~vlI~g~g~vg~~~~~-la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~-~---~~~~~~vd 228 (334)
T cd08234 156 GIKPGDSVLVFGAGPIGLLLAQ-LLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR--EDPEAQ-K---EDNPYGFD 228 (334)
T ss_pred CCCCCCEEEEECCCHHHHHHHH-HHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC--CCHHHH-H---HhcCCCCc
Confidence 8999999999988999999999 999999976888888999999999999887766533 333333 1 22367899
Q ss_pred EEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC--CccccchHhhhcCcEEEeecccCCcHHHHHHHHHcCCCCCCCceE
Q 017868 258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH--EMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVT 335 (365)
Q Consensus 258 ~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~ 335 (365)
++||++|........+++++++|+++.+|.... ........+..+++.+.+.......+++++++++++.+.+.+.++
T Consensus 229 ~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 308 (334)
T cd08234 229 VVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVS 308 (334)
T ss_pred EEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEE
Confidence 999999876788899999999999999975432 222222233447788888766667789999999999986545567
Q ss_pred EEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868 336 HRFGFSQKEVEEAFETSARGGTAIKVMF 363 (365)
Q Consensus 336 ~~~~~~~~~~~~a~~~~~~~~~~gk~vi 363 (365)
++|++ +++.+|++.+.+ ...+|+|+
T Consensus 309 ~~~~~--~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 309 HRLPL--EEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred EEecH--HHHHHHHHHHhc-CCceEEEe
Confidence 78888 999999999998 78899986
No 66
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=3.1e-39 Score=296.16 Aligned_cols=329 Identities=33% Similarity=0.609 Sum_probs=268.9
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCC
Q 017868 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG 106 (365)
Q Consensus 27 ~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 106 (365)
..+++.+.|.|.|+++||+|||.++++|+.|+..+.+.........+|.++|+|++|+|+++|+++++|++||+|++.++
T Consensus 9 ~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 88 (340)
T TIGR00692 9 YGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETH 88 (340)
T ss_pred CCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCc
Confidence 57889999999999999999999999999999876553211112345778999999999999999999999999999999
Q ss_pred cCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhcCCCCCCEEE
Q 017868 107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVL 186 (365)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~~~~~g~~vl 186 (365)
..|+.|..|..+..++|++..+++. ...|+|++|+.++++.++++|+++++++++...++.+|++++ ....++|++++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~a~~~~-~~~~~~g~~vl 166 (340)
T TIGR00692 89 IVCGKCYACRRGQYHVCQNTKIFGV-DTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTV-LAGPISGKSVL 166 (340)
T ss_pred CCCCCChhhhCcChhhCcCcceEee-cCCCcceeEEEeehHHcEECcCCCChHhhhhcchHHHHHHHH-HccCCCCCEEE
Confidence 9999999999999999998755543 356999999999999999999999987776556788888876 34578999999
Q ss_pred EEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCH
Q 017868 187 IMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN 266 (365)
Q Consensus 187 I~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~ 266 (365)
|.|+|.+|+++++ +++.+|+++++++++++++.++++++|++.++++.. .++.+.+.++.. +.++|+++|++|..
T Consensus 167 I~~~g~vg~~a~~-la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~l~~~~~--~~~~d~vld~~g~~ 241 (340)
T TIGR00692 167 VTGAGPIGLMAIA-VAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--EDVVKEVADLTD--GEGVDVFLEMSGAP 241 (340)
T ss_pred EECCCHHHHHHHH-HHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--cCHHHHHHHhcC--CCCCCEEEECCCCH
Confidence 9888999999999 999999976778888889999999999987776533 566666665532 57899999999877
Q ss_pred HHHHHHHHhcccCCEEEEEccCCCCccccch-HhhhcCcEEEeeccc--CCcHHHHHHHHHcCCCCCCCceEEEecCChh
Q 017868 267 KTMSTALGATCAGGKVCLVGMGHHEMTVPLT-PAAVREVDVVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQK 343 (365)
Q Consensus 267 ~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~ 343 (365)
..+...+++|+++|+++.+|........... .+.++.+++.+.... .+.+.+++++++++.+...+.+.+.+++ +
T Consensus 242 ~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l--~ 319 (340)
T TIGR00692 242 KALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKF--D 319 (340)
T ss_pred HHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeeeH--H
Confidence 7888999999999999999864332222223 466777887775432 3457889999999999644557788888 9
Q ss_pred hHHHHHHHHhcCCCceEEEEeC
Q 017868 344 EVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 344 ~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
++.++++.+.++. .||+|+++
T Consensus 320 ~~~~a~~~~~~~~-~gkvvv~~ 340 (340)
T TIGR00692 320 KFEKGFELMRSGQ-TGKVILSL 340 (340)
T ss_pred HHHHHHHHHhcCC-CceEEEeC
Confidence 9999999998876 49999986
No 67
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=5.2e-39 Score=294.62 Aligned_cols=331 Identities=25% Similarity=0.427 Sum_probs=269.7
Q ss_pred ceeEEEecCCceE-EEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868 18 NMAAWLLGVNTLK-IQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (365)
Q Consensus 18 ~~~~~~~~~~~l~-~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (365)
||++++.+++... +++.|.|.+.++||+|||.++++|+.|+....|... ...|.++|||++|+|+.+|+++++|+
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~~G~~v~~~~ 76 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFG----DKTGRILGHEGIGIVKEVGPGVTSLK 76 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCC----CCCCccCCcccceEEEEECCCCccCC
Confidence 6788888776555 899999999999999999999999999988876432 12367899999999999999999999
Q ss_pred CCCEEEEc-CCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH
Q 017868 97 PGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (365)
Q Consensus 97 ~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~ 174 (365)
+||+|++. ...+|+.|.+|..+..++|.+....+. ..+|+|+||+.++.++++++|+++++.+++.++ .+.+||+++
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~ 155 (338)
T PRK09422 77 VGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGY-TVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI 155 (338)
T ss_pred CCCEEEEccCCCCCCCChhhcCCCcccCCCccccCc-cccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH
Confidence 99999874 455799999999999999987654433 346999999999999999999999999988876 778899998
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHH-CCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRA-FGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~-~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~ 253 (365)
+.+++++|++|||+|+|++|+++++ +++. .|+ .++++++++++.++++++|++.++++.. ..++.+.+++.. +
T Consensus 156 ~~~~~~~g~~vlV~g~g~vG~~~~~-la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~v~~~~---~ 229 (338)
T PRK09422 156 KVSGIKPGQWIAIYGAGGLGNLALQ-YAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR-VEDVAKIIQEKT---G 229 (338)
T ss_pred HhcCCCCCCEEEEECCcHHHHHHHH-HHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-cccHHHHHHHhc---C
Confidence 7788999999999999999999999 8887 598 5788889999999999999988776432 134555555442 3
Q ss_pred CCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCC
Q 017868 254 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKP 332 (365)
Q Consensus 254 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~ 332 (365)
++|+++.+.+....+..++++++.+|+++.+|............+..+..++.+.... .+.+++++++++++.+ .+
T Consensus 230 -~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~ 306 (338)
T PRK09422 230 -GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKV--VP 306 (338)
T ss_pred -CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCC--Cc
Confidence 6885555555567889999999999999999865433334444566678888776543 5678899999999988 34
Q ss_pred ceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 333 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 333 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
.+ +.+++ +++++|++.+.++...||+++++
T Consensus 307 ~v-~~~~~--~~~~~a~~~~~~~~~~gkvvv~~ 336 (338)
T PRK09422 307 KV-QLRPL--EDINDIFDEMEQGKIQGRMVIDF 336 (338)
T ss_pred cE-EEEcH--HHHHHHHHHHHcCCccceEEEec
Confidence 44 45677 99999999999999999999864
No 68
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=9.2e-39 Score=293.35 Aligned_cols=334 Identities=28% Similarity=0.441 Sum_probs=278.1
Q ss_pred ceeEEEecCC--ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868 18 NMAAWLLGVN--TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (365)
Q Consensus 18 ~~~~~~~~~~--~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (365)
|+++++.+++ .+++.+++.|.+.++||+||+.++++|+.|+....|..... ...|.++|+|++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~V~~vG~~~~~~ 78 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVK--PKLPLIGGHEGAGVVVAVGPGVSGL 78 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcC--CCCCccCCcccceEEEEeCCCCCCC
Confidence 5788888665 89999999999999999999999999999998887654321 3446789999999999999999999
Q ss_pred CCCCEEEEcC-CcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868 96 VPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (365)
Q Consensus 96 ~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~ 173 (365)
++||+|+..+ ...|+.|.+|+.++..+|......+. ...|++++|+.++++.++++|+++++.+++.++ .+.+||++
T Consensus 79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~ 157 (341)
T cd08297 79 KVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGY-TVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKA 157 (341)
T ss_pred CCCCEEEEecCCCCCCCCccccCCCcccCCCcccccc-ccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHH
Confidence 9999999875 56799999999999999988766655 356899999999999999999999999988765 78889999
Q ss_pred HHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868 174 CRRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 252 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~ 252 (365)
++..++++++++||+|+ +.+|+++++ +++.+|+ .++++.+++++.+.++++|++.++++.. .++.+.+.+.. .
T Consensus 158 ~~~~~~~~~~~vlV~g~~~~vg~~~~~-~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~~--~ 231 (341)
T cd08297 158 LKKAGLKPGDWVVISGAGGGLGHLGVQ-YAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK--SDDVEAVKELT--G 231 (341)
T ss_pred HHhcCCCCCCEEEEECCCchHHHHHHH-HHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCC--ccHHHHHHHHh--c
Confidence 87678999999999987 679999999 9999999 5777888889999999999988877543 36666666553 2
Q ss_pred CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc-cccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCC
Q 017868 253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDV 330 (365)
Q Consensus 253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~ 330 (365)
++++|+++|+.+....+..++++++++|+++.+|...... .+....+..++.++.+.... .+.+++++++++++.+.
T Consensus 232 ~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~- 310 (341)
T cd08297 232 GGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVK- 310 (341)
T ss_pred CCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCc-
Confidence 6789999998877778899999999999999998544322 33334455788888875543 46789999999999984
Q ss_pred CCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 331 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 331 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+.+ +.|++ +++.++++.+..+...||+++++
T Consensus 311 -~~~-~~~~~--~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 311 -PHI-QVVPL--EDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred -cee-EEEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence 333 56777 99999999999999999999875
No 69
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4e-39 Score=294.94 Aligned_cols=327 Identities=26% Similarity=0.434 Sum_probs=270.3
Q ss_pred ceeEEEecCCc-eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868 18 NMAAWLLGVNT-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (365)
Q Consensus 18 ~~~~~~~~~~~-l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (365)
|+++++.+++. +++++.|.|.+.++|++||+.++++|+.|+....|.... ..+|.++|+|++|+|+.+|++++.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~g~~~~~~~ 77 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR---MKYPVILGHEVVGTVEEVGENVKGFK 77 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC---CCCCeeccccceEEEEEeCCCCccCC
Confidence 57888887765 999999999999999999999999999999887764321 34577899999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHH
Q 017868 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR 175 (365)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~ 175 (365)
+||+|++....+|+.|.+|..+..+.|......+. ...|+|++|+.++.++++++|+++++.+++.++ .+.+|++++.
T Consensus 78 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~ 156 (334)
T PRK13771 78 PGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLR 156 (334)
T ss_pred CCCEEEECCCCCCcCChhhcCCCcccCcccccccc-ccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHH
Confidence 99999999888999999999999999998766554 357999999999999999999999999988876 7788999886
Q ss_pred hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868 176 RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 176 ~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~ 254 (365)
...++++++|||+|+ |.+|+++++ +++..|+ .++++++++++.+.++++ ++.+++.. ++.+.+++. .
T Consensus 157 ~~~~~~~~~vlI~g~~g~~g~~~~~-la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~v~~~-----~ 224 (334)
T PRK13771 157 RAGVKKGETVLVTGAGGGVGIHAIQ-VAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS----KFSEEVKKI-----G 224 (334)
T ss_pred hcCCCCCCEEEEECCCccHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch----hHHHHHHhc-----C
Confidence 568899999999987 999999999 9999999 477777888888888888 65554421 344444432 3
Q ss_pred CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCcc--ccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCC
Q 017868 255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT--VPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVK 331 (365)
Q Consensus 255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~--~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~ 331 (365)
++|+++|++|.. ....++++++++|+++.+|....... ........++.++.+.... .+.+++++++++++.+ .
T Consensus 225 ~~d~~ld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~ 301 (334)
T PRK13771 225 GADIVIETVGTP-TLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKI--K 301 (334)
T ss_pred CCcEEEEcCChH-HHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCC--c
Confidence 799999999975 67899999999999999986433211 2233345677888876543 5678899999999998 4
Q ss_pred CceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 332 PLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 332 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+.+.+.|++ +++++|++.++++...+|++++.
T Consensus 302 ~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 302 PVIGAEVSL--SEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred ceEeeeEcH--HHHHHHHHHHHcCCCcceEEEec
Confidence 557788888 99999999999888899999863
No 70
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.1e-38 Score=292.55 Aligned_cols=333 Identities=31% Similarity=0.535 Sum_probs=276.9
Q ss_pred ceeEEEecCC-c-eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868 18 NMAAWLLGVN-T-LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (365)
Q Consensus 18 ~~~~~~~~~~-~-l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (365)
|+++++..++ . +.+.+.+.|.+.+++|+|+|.++++|+.|+....|.... ....|.++|+|++|+|+++|++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~~~~~g~~~~G~v~~~G~~v~~~ 78 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPT--LTKLPLTLGHEIAGTVVEVGAGVTNF 78 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcc--cCCCCEeccccccEEEEEECCCCccC
Confidence 5778888654 3 578888999999999999999999999999988775431 23457789999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH
Q 017868 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (365)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~ 174 (365)
++||+|++.+..+|+.|.+|+.++.++|......+. ...|+|++|+.++.+.++++|+++++.+++.++ ++.+||+++
T Consensus 79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l 157 (338)
T cd08254 79 KVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGL-GIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAV 157 (338)
T ss_pred CCCCEEEECCCCCCCCChhhhCcCcccCCCCCcccc-ccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence 999999999999999999999999999966544443 356999999999999999999999999988775 888999988
Q ss_pred H-hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868 175 R-RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 175 ~-~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~ 253 (365)
. ..+++++++|||.|+|.+|+++++ +++..|++ ++++++++++.+.++++|++.++...+ ..+...+ .. ..+
T Consensus 158 ~~~~~~~~~~~vli~g~g~vG~~~~~-la~~~G~~-V~~~~~s~~~~~~~~~~g~~~~~~~~~--~~~~~~~-~~--~~~ 230 (338)
T cd08254 158 VRAGEVKPGETVLVIGLGGLGLNAVQ-IAKAMGAA-VIAVDIKEEKLELAKELGADEVLNSLD--DSPKDKK-AA--GLG 230 (338)
T ss_pred HhccCCCCCCEEEEECCcHHHHHHHH-HHHHcCCE-EEEEcCCHHHHHHHHHhCCCEEEcCCC--cCHHHHH-HH--hcC
Confidence 4 567999999999888999999999 99999995 788888899999999999987766432 3444444 22 236
Q ss_pred CCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCC
Q 017868 254 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKP 332 (365)
Q Consensus 254 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~ 332 (365)
+++|+++|++|....+..++++|+++|+++.++.......+....+..++.++.+.+.. .+.+.+++++++++.+.+
T Consensus 231 ~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~-- 308 (338)
T cd08254 231 GGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDP-- 308 (338)
T ss_pred CCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCcc--
Confidence 78999999998777889999999999999999865444444555567788888876654 567889999999999853
Q ss_pred ceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 333 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 333 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
. .+.+++ +++.++++.+.+++..+|+|+++
T Consensus 309 ~-~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 309 Q-VETRPL--DEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred c-ceeEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence 3 567777 99999999999999999999874
No 71
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=7.6e-40 Score=291.68 Aligned_cols=260 Identities=25% Similarity=0.396 Sum_probs=219.9
Q ss_pred ccCccceEEEEEeCCCCC------CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccC------CCCcceeeEEe
Q 017868 76 VIGHECAGVIEKVGSEVK------TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP------PVHGSLANQVV 143 (365)
Q Consensus 76 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~ 143 (365)
++|||++|+|+++|++|+ +|++||||++.+..+|++|.+|+.+++++|++..+.+.. ..+|+|+||+.
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 589999999999999999 899999999999999999999999999999987665532 24699999999
Q ss_pred ecCC-ceEECCCCCCcchhccch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH
Q 017868 144 HPAD-LCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS 221 (365)
Q Consensus 144 v~~~-~~~~iP~~~~~~~a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~ 221 (365)
+++. +++++|+++++++++.++ ...||+++++.....+|++|||+|+|++|++++| +++.+|+++|++++++++|.+
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~-~ak~~G~~~Vi~~~~~~~r~~ 159 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAA-AAAAAGAARVVAADPSPDRRE 159 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEECCCHHHHH
Confidence 9997 799999999999988776 6678999987777779999999999999999999 999999977888888999999
Q ss_pred HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC--CCccccchHh
Q 017868 222 VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH--HEMTVPLTPA 299 (365)
Q Consensus 222 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~--~~~~~~~~~~ 299 (365)
+++++|++.+++.. +..+.+++.+ .+.++|++||++|.+..+..++++++++|+++.+|... ....++...+
T Consensus 160 ~a~~~Ga~~~i~~~----~~~~~~~~~~--~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~ 233 (280)
T TIGR03366 160 LALSFGATALAEPE----VLAERQGGLQ--NGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQV 233 (280)
T ss_pred HHHHcCCcEecCch----hhHHHHHHHh--CCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHH
Confidence 99999998877642 2233444432 25689999999998878899999999999999998643 2335566678
Q ss_pred hhcCcEEEeeccc-CCcHHHHHHHHHcC--CCCCCCceEEEecCChhh
Q 017868 300 AVREVDVVGVFRY-KNTWPLCLELLRSG--KIDVKPLVTHRFGFSQKE 344 (365)
Q Consensus 300 ~~~~~~i~~~~~~-~~~~~~~~~~l~~g--~~~~~~~~~~~~~~~~~~ 344 (365)
..+++++.+++.+ ..+++++++++.++ .+.+.++++++|++ ++
T Consensus 234 ~~~~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l--~~ 279 (280)
T TIGR03366 234 VRRWLTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPL--AD 279 (280)
T ss_pred HhCCcEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhccccc--cc
Confidence 8899999998876 46799999999985 55566788899888 65
No 72
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.5e-38 Score=290.06 Aligned_cols=305 Identities=17% Similarity=0.187 Sum_probs=241.2
Q ss_pred hcceeEEEe-------cCCceEEEE---ecCCC-CCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCc--cce
Q 017868 16 EVNMAAWLL-------GVNTLKIQP---FELPS-LGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH--ECA 82 (365)
Q Consensus 16 ~~~~~~~~~-------~~~~l~~~~---~~~p~-~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~--e~~ 82 (365)
.++|++++. .++.|++.+ .+.|. ++++||||||.++++||.|...+.+... ....|.++|+ |++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~---~~~~p~~~G~~~~~~ 83 (348)
T PLN03154 7 VENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD---SYLPPFVPGQRIEGF 83 (348)
T ss_pred ccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC---CCCCCcCCCCeeEee
Confidence 345666664 225788887 46763 5899999999999999998764432111 1235889997 889
Q ss_pred EEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCc--eEE--CCCCCCc
Q 017868 83 GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL--CFK--LPDNVSL 158 (365)
Q Consensus 83 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~--~~~--iP~~~~~ 158 (365)
|+|..+|+++++|++||+|+++ |+|+||+.++... +.+ +|+++++
T Consensus 84 G~v~~vg~~v~~~~~Gd~V~~~-------------------------------~~~aey~~v~~~~~~~~~~~~P~~~~~ 132 (348)
T PLN03154 84 GVSKVVDSDDPNFKPGDLISGI-------------------------------TGWEEYSLIRSSDNQLRKIQLQDDIPL 132 (348)
T ss_pred EEEEEEecCCCCCCCCCEEEec-------------------------------CCcEEEEEEeccccceEEccCcCCCCH
Confidence 9999999999999999999764 7899999999753 544 5899998
Q ss_pred c-hhccch-hhHHHHHHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEe
Q 017868 159 E-EGAMCE-PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK-EIGADNIVK 233 (365)
Q Consensus 159 ~-~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~-~~g~~~~~~ 233 (365)
+ +|+.++ +..|||+++ +.+++++|++|||+|+ |++|++++| +++.+|+ .++++++++++.++++ ++|++.+++
T Consensus 133 ~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiq-lAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~ 210 (348)
T PLN03154 133 SYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQ-LAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFN 210 (348)
T ss_pred HHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHH-HHHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEE
Confidence 6 566665 888999998 4588999999999987 999999999 9999999 5788888899999887 799999988
Q ss_pred CCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-c-----cccchHhhhcCcEEE
Q 017868 234 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-M-----TVPLTPAAVREVDVV 307 (365)
Q Consensus 234 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~-----~~~~~~~~~~~~~i~ 307 (365)
+.. ..++.+.+++.. ++++|++||++|.. .+..++++++++|+++.+|..... . ..+...+..+++++.
T Consensus 211 ~~~-~~~~~~~i~~~~---~~gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~ 285 (348)
T PLN03154 211 YKE-EPDLDAALKRYF---PEGIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQ 285 (348)
T ss_pred CCC-cccHHHHHHHHC---CCCcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEE
Confidence 642 135666665542 46899999999964 888999999999999999854321 1 113345677888998
Q ss_pred eeccc------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 308 GVFRY------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 308 ~~~~~------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+++.. .+.++++++++++|++ ++.+.++|+| +++.+|++.+++++..||+||++
T Consensus 286 g~~~~~~~~~~~~~~~~~~~l~~~G~l--~~~~~~~~~L--~~~~~A~~~l~~g~~~GKvVl~~ 345 (348)
T PLN03154 286 GFLQSDYLHLFPQFLENVSRYYKQGKI--VYIEDMSEGL--ESAPAALVGLFSGKNVGKQVIRV 345 (348)
T ss_pred EEEHHHHHHHHHHHHHHHHHHHHCCCc--cCceecccCH--HHHHHHHHHHHcCCCCceEEEEe
Confidence 87643 2457789999999999 5566677888 99999999999999999999974
No 73
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1e-37 Score=285.23 Aligned_cols=327 Identities=31% Similarity=0.533 Sum_probs=268.4
Q ss_pred ceeEEEec-CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCC
Q 017868 18 NMAAWLLG-VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96 (365)
Q Consensus 18 ~~~~~~~~-~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~ 96 (365)
|+++++.. ++.+.+.+.|.|.+.++||+|+|.++++|+.|+....|.... ...|.++|+|++|+|+.+|++++.|+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~G~~v~~~~ 77 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR---GKYPLILGHEIVGTVEEVGEGVERFK 77 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC---CCCCeeccccceEEEEEECCCCccCC
Confidence 57888876 578999999999999999999999999999999988764321 34577899999999999999999999
Q ss_pred CCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHH
Q 017868 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR 175 (365)
Q Consensus 97 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~ 175 (365)
+||+|+++.+..|++|.+|..+.+++|.+....+ ....|+|++|+.++...++++|+++++++++.++ .+.+||++++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~ 156 (332)
T cd08259 78 PGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYG-EEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALK 156 (332)
T ss_pred CCCEEEECCCCCCcCChhhhCCCcccCCCccccc-cccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHH
Confidence 9999999999999999999999999998763333 3457999999999999999999999999888776 7888999986
Q ss_pred hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868 176 RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 176 ~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~ 254 (365)
.+++.+++++||+|+ |.+|+++++ +++..|++ ++.+.+++++.+.+++++.+.+++.. ++.+.+.+. .
T Consensus 157 ~~~~~~~~~vlI~ga~g~vG~~~~~-~a~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-----~ 225 (332)
T cd08259 157 RAGVKKGDTVLVTGAGGGVGIHAIQ-LAKALGAR-VIAVTRSPEKLKILKELGADYVIDGS----KFSEDVKKL-----G 225 (332)
T ss_pred HhCCCCCCEEEEECCCCHHHHHHHH-HHHHcCCe-EEEEeCCHHHHHHHHHcCCcEEEecH----HHHHHHHhc-----c
Confidence 688999999999987 999999999 88999995 66666788888888889987665432 144444432 3
Q ss_pred CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCcc-ccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCC
Q 017868 255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKP 332 (365)
Q Consensus 255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~ 332 (365)
++|++++++|.. .....++++.++|+++.++....... ........++..+.+.... ...+++++++++++.+ .+
T Consensus 226 ~~d~v~~~~g~~-~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~ 302 (332)
T cd08259 226 GADVVIELVGSP-TIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKI--KP 302 (332)
T ss_pred CCCEEEECCChH-HHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCC--cc
Confidence 799999999975 57889999999999999875432211 1223344567777766543 5678889999999988 45
Q ss_pred ceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 333 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 333 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
.+.++|++ +++.+|++.+.++...+|++++
T Consensus 303 ~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 303 VIDRVVSL--EDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred ceeEEEcH--HHHHHHHHHHHcCCcccEEEeC
Confidence 57788888 9999999999999889999874
No 74
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.8e-37 Score=283.35 Aligned_cols=320 Identities=25% Similarity=0.382 Sum_probs=263.1
Q ss_pred ceeEEEecCC-----ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868 18 NMAAWLLGVN-----TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92 (365)
Q Consensus 18 ~~~~~~~~~~-----~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v 92 (365)
|+++++.+++ .+++.+.+.|.+.++||+||+.++++|+.|+....|.... ...|.++|||++|+|+.+|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v 77 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP---PKLPLIPGHEIVGRVEAVGPGV 77 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC---CCCCccccccccEEEEEECCCC
Confidence 5677777655 7888899988899999999999999999999988764322 3457799999999999999999
Q ss_pred CCCCCCCEEEEc-CCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHH
Q 017868 93 KTLVPGDRVALE-PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG 170 (365)
Q Consensus 93 ~~~~~Gd~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a 170 (365)
+++++||+|++. ...+|+.|++|..+.+++|+...+.+. ..+|+|++|+.++.+.++++|+++++.+++.+. .+.+|
T Consensus 78 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta 156 (329)
T cd08298 78 TRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGY-TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIG 156 (329)
T ss_pred CCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCcccccc-ccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHH
Confidence 999999999764 446799999999999999998876665 346999999999999999999999999888775 88899
Q ss_pred HHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868 171 LHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 171 ~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
|++++.+++++++++||+|+|++|+++++ +++..|+ .++++++++++.++++++|++.+++....
T Consensus 157 ~~~~~~~~~~~~~~vlV~g~g~vg~~~~~-la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~------------- 221 (329)
T cd08298 157 YRALKLAGLKPGQRLGLYGFGASAHLALQ-IARYQGA-EVFAFTRSGEHQELARELGADWAGDSDDL------------- 221 (329)
T ss_pred HHHHHhhCCCCCCEEEEECCcHHHHHHHH-HHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCcc-------------
Confidence 99998889999999999999999999999 8999998 57777788899999999999877654321
Q ss_pred HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc-cccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCC
Q 017868 251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKI 328 (365)
Q Consensus 251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~ 328 (365)
.++++|+++++.+....+...+++++++|+++.+|...... ..+. ....++..+.+.... .+.+.+++++++++.+
T Consensus 222 -~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l 299 (329)
T cd08298 222 -PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDY-ELLWGEKTIRSVANLTRQDGEEFLKLAAEIPI 299 (329)
T ss_pred -CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccch-hhhhCceEEEEecCCCHHHHHHHHHHHHcCCC
Confidence 14679999998776778899999999999999887532211 1111 123456666665544 4568889999999988
Q ss_pred CCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868 329 DVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363 (365)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi 363 (365)
. + ..+.|++ +++++|++.++++...||+|+
T Consensus 300 ~--~-~~~~~~~--~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 300 K--P-EVETYPL--EEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred C--c-eEEEEeH--HHHHHHHHHHHcCCCcceeeC
Confidence 4 3 3577888 999999999999999999874
No 75
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=3.2e-38 Score=263.26 Aligned_cols=313 Identities=20% Similarity=0.277 Sum_probs=248.7
Q ss_pred cchhcceeEEEecC----CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEe
Q 017868 13 DGEEVNMAAWLLGV----NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88 (365)
Q Consensus 13 ~~~~~~~~~~~~~~----~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v 88 (365)
.++...+++++... +.+++.+.++|+...++|+||..++.|||+|+..++|.++.. ..+|.+-|+|++|+|+.+
T Consensus 15 q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvr--P~~PAVgGnEGv~eVv~v 92 (354)
T KOG0025|consen 15 QMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVR--PELPAVGGNEGVGEVVAV 92 (354)
T ss_pred ccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCC--CCCCcccCCcceEEEEEe
Confidence 34556788888732 588999999999988889999999999999999999987654 466899999999999999
Q ss_pred CCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hh
Q 017868 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PL 167 (365)
Q Consensus 89 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~ 167 (365)
|+++++|++||+|+.... ..|+|++|.+.+++.++++++.++.+.||++. .-
T Consensus 93 Gs~vkgfk~Gd~VIp~~a---------------------------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP 145 (354)
T KOG0025|consen 93 GSNVKGFKPGDWVIPLSA---------------------------NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNP 145 (354)
T ss_pred cCCcCccCCCCeEeecCC---------------------------CCccceeeEeecccceEEcCCcCChhhhheeccCc
Confidence 999999999999998743 45999999999999999999999999999997 78
Q ss_pred HHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh---hHHHHHHHcCCCEEEeCCCCcccHH
Q 017868 168 SVGLHACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD---YRLSVAKEIGADNIVKVSTNLQDIA 242 (365)
Q Consensus 168 ~~a~~~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~ 242 (365)
+|||.++. -.++.+||+|+-.|+ +++|++.+| +|+++|++.+-++...+ +-.+.++.+||++++.-++...
T Consensus 146 ~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQ-laka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~--- 221 (354)
T KOG0025|consen 146 CTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQ-LAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD--- 221 (354)
T ss_pred hHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHH-HHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc---
Confidence 89999995 478999999888888 999999999 99999997666664433 3345677899999986322110
Q ss_pred HHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEc-cCCCCccccchHhhhcCcEEEeeccc---------
Q 017868 243 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVFRY--------- 312 (365)
Q Consensus 243 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g-~~~~~~~~~~~~~~~~~~~i~~~~~~--------- 312 (365)
...+.. ......+.+.|+|+|+. ......+.|.+||.++.+| ++..+...+...+.|+.+.++|+|..
T Consensus 222 ~~~~k~-~~~~~~prLalNcVGGk-sa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~p 299 (354)
T KOG0025|consen 222 RKMKKF-KGDNPRPRLALNCVGGK-SATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSP 299 (354)
T ss_pred hhhhhh-hccCCCceEEEeccCch-hHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCc
Confidence 111111 11256789999999987 5567789999999999997 66777889999999999999999854
Q ss_pred ---CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcC-CCceEEEEe
Q 017868 313 ---KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMFN 364 (365)
Q Consensus 313 ---~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vi~ 364 (365)
.+.+.++.+|+++|++. .......+| ++...|++..... ...||.+|.
T Consensus 300 e~~~~~i~~~~~l~~~G~i~--~~~~e~v~L--~~~~tald~~L~~~~~~~Kq~i~ 351 (354)
T KOG0025|consen 300 EERKEMIDELCDLYRRGKLK--APNCEKVPL--ADHKTALDAALSKFGKSGKQIIV 351 (354)
T ss_pred HHHHHHHHHHHHHHHcCeec--cccceeeec--hhhhHHHHHHHHHhccCCceEEE
Confidence 23567899999999994 333334456 7777887754333 333566654
No 76
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=3.4e-37 Score=282.80 Aligned_cols=334 Identities=29% Similarity=0.477 Sum_probs=272.4
Q ss_pred ceeEEEe---cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868 18 NMAAWLL---GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (365)
Q Consensus 18 ~~~~~~~---~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (365)
|+++++. ....+++.+.+.|.+.+++|+|++.++++|+.|+....|.... ....|.++|||++|+|+.+|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~G~~~~~ 78 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGI--KLPLPHILGSDGAGVVEAVGPGVTN 78 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCC--CCCCCeecccceEEEEEEeCCCCCC
Confidence 5788887 4467888888888899999999999999999999888764321 1355788999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (365)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~ 173 (365)
|++||+|++.+..+|+.|.+|..+.++.|+...+.+. ...|++++|+.++.+.++++|+++++++++.++ .+.+|+++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~ 157 (342)
T cd08266 79 VKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHM 157 (342)
T ss_pred CCCCCEEEEccccccccchhhcccccccccccccccc-ccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHH
Confidence 9999999999999999999999999999998766654 357899999999999999999999999888876 67789988
Q ss_pred H-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868 174 C-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 174 ~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
+ +..++.++++++|+|+ +.+|+++++ +++..|++ ++.+++++++.+.++.++.+..++. ...++...+.+..
T Consensus 158 l~~~~~~~~~~~vlI~g~~~~iG~~~~~-~~~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-- 231 (342)
T cd08266 158 LVTRARLRPGETVLVHGAGSGVGSAAIQ-IAKLFGAT-VIATAGSEDKLERAKELGADYVIDY--RKEDFVREVRELT-- 231 (342)
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHH-HHHHcCCE-EEEEeCCHHHHHHHHHcCCCeEEec--CChHHHHHHHHHh--
Confidence 7 5688899999999987 799999999 88999995 6777788888888888887765543 3345555554432
Q ss_pred hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCC
Q 017868 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKID 329 (365)
Q Consensus 252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~ 329 (365)
.+.++|++++++|.. .+...+++++++|+++.++..... ..........++..+.+.... ...+.+++++++++.+
T Consensus 232 ~~~~~d~~i~~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l- 309 (342)
T cd08266 232 GKRGVDVVVEHVGAA-TWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKL- 309 (342)
T ss_pred CCCCCcEEEECCcHH-HHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCc-
Confidence 256899999999964 778899999999999999754332 222222345677777776544 4578889999999987
Q ss_pred CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 330 VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
.+..++.|++ +++++|++.+.++...+|+++++
T Consensus 310 -~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 310 -KPVIDSVFPL--EEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred -ccceeeeEcH--HHHHHHHHHHHhCCCCceEEEeC
Confidence 4557788888 99999999998888889999864
No 77
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=1e-37 Score=286.85 Aligned_cols=299 Identities=20% Similarity=0.245 Sum_probs=227.3
Q ss_pred CCceEEEEecCCCCC-CCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEc
Q 017868 26 VNTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE 104 (365)
Q Consensus 26 ~~~l~~~~~~~p~~~-~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 104 (365)
++.+++.+.|.|+|. ++||+|||.++|+||.|...........+...+|.++|+|++|+|+++|+++++|++||||++.
T Consensus 20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 99 (345)
T cd08293 20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF 99 (345)
T ss_pred ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence 358999999999874 9999999999999999864332111111223467899999999999999999999999999763
Q ss_pred CCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcch-----hccchhhHHHHHHH-HhcC
Q 017868 105 PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE-----GAMCEPLSVGLHAC-RRAN 178 (365)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~-----a~~~~~~~~a~~~~-~~~~ 178 (365)
.++|+||++++++.++++|+++++.+ ++...++.|||+++ +.++
T Consensus 100 ------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~ 149 (345)
T cd08293 100 ------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGH 149 (345)
T ss_pred ------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhcc
Confidence 15799999999999999999864432 23334788999998 4677
Q ss_pred CCCC--CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868 179 IGPE--TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 179 ~~~g--~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~~~~~ 254 (365)
+++| ++|||+|+ |++|++++| +++.+|+.+|+++++++++.+++++ +|++.++++.. .++.+.+++.+ ++
T Consensus 150 ~~~g~~~~VlI~ga~g~vG~~aiq-lAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~--~~~~~~i~~~~---~~ 223 (345)
T cd08293 150 ITPGANQTMVVSGAAGACGSLAGQ-IGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT--DNVAERLRELC---PE 223 (345)
T ss_pred CCCCCCCEEEEECCCcHHHHHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC--CCHHHHHHHHC---CC
Confidence 8877 99999987 999999999 9999999668888888999988876 99999887543 56777776653 46
Q ss_pred CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC---Ccc--ccc----hHhh-hcCcEEEeec--cc----CCcHHH
Q 017868 255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH---EMT--VPL----TPAA-VREVDVVGVF--RY----KNTWPL 318 (365)
Q Consensus 255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~---~~~--~~~----~~~~-~~~~~i~~~~--~~----~~~~~~ 318 (365)
++|++||++|.. .+..++++|+++|+++.+|.... +.. ... ..+. .+++...... .. .+.+++
T Consensus 224 gvd~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (345)
T cd08293 224 GVDVYFDNVGGE-ISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQ 302 (345)
T ss_pred CceEEEECCCcH-HHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHH
Confidence 899999999976 67899999999999999874211 111 111 1111 2233332221 11 234677
Q ss_pred HHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 319 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 319 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
++++++++.+. +.....+++ +++.+|++.+.+++..||+|+++
T Consensus 303 ~~~l~~~g~i~--~~~~~~~~l--~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 303 LSQWVKEGKLK--VKETVYEGL--ENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHHHCCCcc--ceeEEeecH--HHHHHHHHHHhcCCCCCeEEEEC
Confidence 88999999984 334445577 99999999999998999999975
No 78
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=2e-37 Score=282.44 Aligned_cols=306 Identities=25% Similarity=0.301 Sum_probs=248.7
Q ss_pred ceeEEEecCC----ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868 18 NMAAWLLGVN----TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93 (365)
Q Consensus 18 ~~~~~~~~~~----~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 93 (365)
|+++++.+++ .+++.++|.|.+.++||+|||.++++|+.|+..+.|..... ...|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~--~~~p~~~G~e~~G~V~~~G~~v~ 78 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYK--PELPAIGGSEAVGVVDAVGEGVK 78 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCC--CCCCCCCCcceEEEEEEeCCCCC
Confidence 5777877543 48899999999999999999999999999999887754311 23578999999999999999999
Q ss_pred CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHH
Q 017868 94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLH 172 (365)
Q Consensus 94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~ 172 (365)
+|++||+|++.. ..|+|++|+.+++..++++|+++++++++.++ ...+|++
T Consensus 79 ~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 130 (324)
T cd08292 79 GLQVGQRVAVAP----------------------------VHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALM 130 (324)
T ss_pred CCCCCCEEEecc----------------------------CCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHH
Confidence 999999998752 25899999999999999999999999988876 5677888
Q ss_pred HHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868 173 ACRRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 173 ~~~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
+++.+++++|++|||+|+ |.+|+++++ +|+.+|++ ++++..++++.+.++++|++.+++. ...++.+.+++.+.
T Consensus 131 ~~~~~~~~~g~~vlI~g~~g~ig~~~~~-~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~i~~~~~- 205 (324)
T cd08292 131 LLDFLGVKPGQWLIQNAAGGAVGKLVAM-LAAARGIN-VINLVRRDAGVAELRALGIGPVVST--EQPGWQDKVREAAG- 205 (324)
T ss_pred HHHhhCCCCCCEEEEcccccHHHHHHHH-HHHHCCCe-EEEEecCHHHHHHHHhcCCCEEEcC--CCchHHHHHHHHhC-
Confidence 887788999999999987 999999999 99999995 5666677777787778998877764 33566666666543
Q ss_pred hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc-----------CCcHHHH
Q 017868 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-----------KNTWPLC 319 (365)
Q Consensus 252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~ 319 (365)
+.++|++||++|.. ....++++++++|+++.+|.... ...+.......++.++.+.... .+.+.++
T Consensus 206 -~~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (324)
T cd08292 206 -GAPISVALDSVGGK-LAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAEL 283 (324)
T ss_pred -CCCCcEEEECCCCh-hHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHH
Confidence 67899999999985 67889999999999999985422 2233334456688888876532 2357889
Q ss_pred HHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 320 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 320 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
+++++++.+.+ ...+.|++ +++.+|++.+.++...+|+++.
T Consensus 284 ~~l~~~g~i~~--~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 284 LTLALKGQLLL--PVEAVFDL--GDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHHHHCCCccC--ccccEecH--HHHHHHHHHHHcCCCCceEEeC
Confidence 99999999843 34677888 9999999999888888999874
No 79
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=2.9e-37 Score=282.85 Aligned_cols=296 Identities=19% Similarity=0.179 Sum_probs=236.1
Q ss_pred CCceEEEEecC----CCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccc--eEEEEEeCCCCCCCCCCC
Q 017868 26 VNTLKIQPFEL----PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHEC--AGVIEKVGSEVKTLVPGD 99 (365)
Q Consensus 26 ~~~l~~~~~~~----p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~--~G~V~~vG~~v~~~~~Gd 99 (365)
++.|++.+.++ |+|+++||||||+++++||.|++...|.... ....|.++|+++ .|.+..+|+++++|++||
T Consensus 18 ~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~--~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd 95 (338)
T cd08295 18 ESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS--LYLPPFKPGEVITGYGVAKVVDSGNPDFKVGD 95 (338)
T ss_pred ccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc--ccCCCcCCCCeEeccEEEEEEecCCCCCCCCC
Confidence 35899998887 8899999999999999999999988774221 124578889754 456666889999999999
Q ss_pred EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecC-CceEECC-CCCCcc-hhccch-hhHHHHHHH-
Q 017868 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLP-DNVSLE-EGAMCE-PLSVGLHAC- 174 (365)
Q Consensus 100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~~~~iP-~~~~~~-~a~~~~-~~~~a~~~~- 174 (365)
+|+++ |+|+||+++++ ..++++| +++++. +++.++ ++.|||+++
T Consensus 96 ~V~~~-------------------------------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~ 144 (338)
T cd08295 96 LVWGF-------------------------------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFY 144 (338)
T ss_pred EEEec-------------------------------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHH
Confidence 99764 68999999999 7999995 678876 566665 788999998
Q ss_pred HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868 175 RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAM 252 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~~~ 252 (365)
+.+++++|++|||+|+ |++|++++| +|+.+|+ .++++++++++.+++++ +|++.++++.. ..++.+.+++..
T Consensus 145 ~~~~~~~g~~VlI~Ga~G~vG~~aiq-lAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~i~~~~--- 218 (338)
T cd08295 145 EVCKPKKGETVFVSAASGAVGQLVGQ-LAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKE-EPDLDAALKRYF--- 218 (338)
T ss_pred HhcCCCCCCEEEEecCccHHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCC-cccHHHHHHHhC---
Confidence 4688999999999987 999999999 9999999 57778888999999988 99998887532 235666665542
Q ss_pred CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc------cccchHhhhcCcEEEeeccc------CCcHHHHH
Q 017868 253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM------TVPLTPAAVREVDVVGVFRY------KNTWPLCL 320 (365)
Q Consensus 253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~------~~~~~~~~~~~~~i~~~~~~------~~~~~~~~ 320 (365)
+.++|++||++|+ ..+..++++++++|+++.+|...... ..+...+.++++++.++... .+.+++++
T Consensus 219 ~~gvd~v~d~~g~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 297 (338)
T cd08295 219 PNGIDIYFDNVGG-KMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMS 297 (338)
T ss_pred CCCcEEEEECCCH-HHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHH
Confidence 4689999999997 57889999999999999998533211 12234566788888875432 23477889
Q ss_pred HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 321 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 321 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+++++|.+. +...+.|++ +++.+|++.+++++..||+|+++
T Consensus 298 ~l~~~g~l~--~~~~~~~~l--~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 298 GYIKEGKLK--YVEDIADGL--ESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHCCCeE--ceeecccCH--HHHHHHHHHHhcCCCCceEEEEC
Confidence 999999984 445556777 99999999999998999999975
No 80
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1.8e-37 Score=282.77 Aligned_cols=289 Identities=19% Similarity=0.236 Sum_probs=231.2
Q ss_pred cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEc
Q 017868 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE 104 (365)
Q Consensus 25 ~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 104 (365)
+++.+++.+.|.|+|++|||+|||.++++||.+.. |.+. ....|.++|+|++|+|+++|+ +|++||||+++
T Consensus 15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~---~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~ 85 (325)
T TIGR02825 15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKR---LKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS 85 (325)
T ss_pred CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCc---CCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe
Confidence 55789999999999999999999999999996543 3211 123467999999999999774 59999999864
Q ss_pred CCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEEC----CCCCCcchh-ccch-hhHHHHHHH-Hhc
Q 017868 105 PGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL----PDNVSLEEG-AMCE-PLSVGLHAC-RRA 177 (365)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i----P~~~~~~~a-~~~~-~~~~a~~~~-~~~ 177 (365)
++|++|+.++.+.+.++ |+++++++| +.++ ++.|||+++ +.+
T Consensus 86 -------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~ 134 (325)
T TIGR02825 86 -------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEIC 134 (325)
T ss_pred -------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHh
Confidence 46899999999988887 899999887 4554 789999997 678
Q ss_pred CCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868 178 NIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 178 ~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 256 (365)
++++|++|||+|+ |++|++++| +++..|+ +++++++++++.++++++|++.++++... .++.+.++.. .++++
T Consensus 135 ~~~~g~~VLI~ga~g~vG~~aiq-lAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~~~~~~~---~~~gv 208 (325)
T TIGR02825 135 GVKGGETVMVNAAAGAVGSVVGQ-IAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLEETLKKA---SPDGY 208 (325)
T ss_pred CCCCCCEEEEeCCccHHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHHHHHHHh---CCCCe
Confidence 8999999999986 999999999 9999999 57778888999999999999998886432 2454444443 25689
Q ss_pred eEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-----Ccc--ccchHhhhcCcEEEeeccc-------CCcHHHHHHH
Q 017868 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-----EMT--VPLTPAAVREVDVVGVFRY-------KNTWPLCLEL 322 (365)
Q Consensus 257 d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-----~~~--~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~ 322 (365)
|++||++|+. .+..++++++++|+++.+|.... ... .....++++.+++.++... .+.+++++++
T Consensus 209 dvv~d~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l 287 (325)
T TIGR02825 209 DCYFDNVGGE-FSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKW 287 (325)
T ss_pred EEEEECCCHH-HHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHH
Confidence 9999999975 67899999999999999985321 111 1233466778888876522 2357889999
Q ss_pred HHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 323 LRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 323 l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
+++|.+. +....+|++ +++.+|++.+++++..||+|+.
T Consensus 288 ~~~g~l~--~~~~~~~~l--~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 288 VLEGKIQ--YKEYVIEGF--ENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHCCCcc--cceeccccH--HHHHHHHHHHhcCCCCCeEEeC
Confidence 9999994 445566777 9999999999999999999974
No 81
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=8.1e-37 Score=279.08 Aligned_cols=297 Identities=20% Similarity=0.252 Sum_probs=235.2
Q ss_pred cceeEEEecC-------CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeC
Q 017868 17 VNMAAWLLGV-------NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG 89 (365)
Q Consensus 17 ~~~~~~~~~~-------~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG 89 (365)
+|+++++... +.+++.+.+.|+|+++||+|||.++++||.|..... . ....|.++|+|++|+|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~-----~-~~~~p~v~G~e~~G~V~~-- 73 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSK-----R-LNEGDTMIGTQVAKVIES-- 73 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccc-----c-CCCCCcEecceEEEEEec--
Confidence 4667666651 468999999999999999999999999988754211 1 124578999999999984
Q ss_pred CCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCC---ceEECCCCCC--c----ch
Q 017868 90 SEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD---LCFKLPDNVS--L----EE 160 (365)
Q Consensus 90 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~---~~~~iP~~~~--~----~~ 160 (365)
.+++|++||||+.. ++|++|+.++++ .++++|++++ + ..
T Consensus 74 -~~~~~~~Gd~V~~~-------------------------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~ 121 (329)
T cd08294 74 -KNSKFPVGTIVVAS-------------------------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLAL 121 (329)
T ss_pred -CCCCCCCCCEEEee-------------------------------CCeeeEEEECCccccceEECCccccccCChHHHH
Confidence 45689999999763 578999999999 9999999988 2 22
Q ss_pred hccchhhHHHHHHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCc
Q 017868 161 GAMCEPLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNL 238 (365)
Q Consensus 161 a~~~~~~~~a~~~~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~ 238 (365)
++...++.|||+++ +.+++++|++|||+|+ |++|++++| +++..|+ .++++++++++.++++++|++.++++..
T Consensus 122 a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiq-lA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~-- 197 (329)
T cd08294 122 GVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQ-IAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKT-- 197 (329)
T ss_pred HhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC--
Confidence 32334888999998 5688999999999986 999999999 9999999 5788888999999999999999887543
Q ss_pred ccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC---C-c---cccchHhhhcCcEEEeecc
Q 017868 239 QDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH---E-M---TVPLTPAAVREVDVVGVFR 311 (365)
Q Consensus 239 ~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~---~-~---~~~~~~~~~~~~~i~~~~~ 311 (365)
+++.+.+++.. +.++|++||++|+ ..+..++++++++|+++.+|.... . . ..+...++.+++++.++..
T Consensus 198 ~~~~~~v~~~~---~~gvd~vld~~g~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 273 (329)
T cd08294 198 VSLEEALKEAA---PDGIDCYFDNVGG-EFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIV 273 (329)
T ss_pred ccHHHHHHHHC---CCCcEEEEECCCH-HHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEh
Confidence 56766666543 4689999999997 578899999999999999874211 1 0 1223346778888887653
Q ss_pred c------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 312 Y------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 312 ~------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
. .+.+++++++++++.+.+ ....+|++ +++.+|++.+.+++..||+|+++
T Consensus 274 ~~~~~~~~~~~~~~~~l~~~g~i~~--~~~~~~~l--~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 274 YRWQDRWPEALKQLLKWIKEGKLKY--REHVTEGF--ENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred hhhHHHHHHHHHHHHHHHHCCCCcC--CcccccCH--HHHHHHHHHHHcCCCCCeEEEeC
Confidence 2 234678899999999953 34455777 99999999999999999999975
No 82
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=1.1e-36 Score=277.72 Aligned_cols=318 Identities=26% Similarity=0.409 Sum_probs=256.2
Q ss_pred ceeEEEecC--CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868 18 NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (365)
Q Consensus 18 ~~~~~~~~~--~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (365)
|+++++..+ +.+++.+.+.|+++++||+||+.++++|+.|+....+.. ...+|.++|||++|+|+++|+++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~ 76 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK----VKPMPHIPGAEFAGVVEEVGDHVKGV 76 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCC----CCCCCeecccceeEEEEEECCCCCCC
Confidence 467777644 478888889888999999999999999999998876311 12347789999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH
Q 017868 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (365)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~ 174 (365)
++||+|++.+...|++|.+|..++.++|.+....+. ...|+|++|+.++++.++++|+++++++++.++ .+.+|++++
T Consensus 77 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l 155 (325)
T cd08264 77 KKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGV-VSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHAL 155 (325)
T ss_pred CCCCEEEECCCcCCCCChhhcCCCccccCccceeec-cCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence 999999999999999999999999999998665543 356899999999999999999999999988876 678899998
Q ss_pred HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868 175 RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~ 253 (365)
+.+++++|++|+|+|+ |.+|+++++ +|+..|++ ++++. +.+.++++|++.+++.+ ++.+.+++. .
T Consensus 156 ~~~~~~~g~~vlI~g~~g~vg~~~~~-~a~~~G~~-v~~~~----~~~~~~~~g~~~~~~~~----~~~~~l~~~---~- 221 (325)
T cd08264 156 KTAGLGPGETVVVFGASGNTGIFAVQ-LAKMMGAE-VIAVS----RKDWLKEFGADEVVDYD----EVEEKVKEI---T- 221 (325)
T ss_pred HhcCCCCCCEEEEECCCchHHHHHHH-HHHHcCCe-EEEEe----HHHHHHHhCCCeeecch----HHHHHHHHH---h-
Confidence 7788999999999997 999999999 99999995 55554 23667889988776532 223444443 2
Q ss_pred CCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCC
Q 017868 254 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVK 331 (365)
Q Consensus 254 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~ 331 (365)
+++|+++|++|. ..+...+++|+++|+++.+|.... ...++...+..++.++.+.... .+.++++++++....
T Consensus 222 ~~~d~vl~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---- 296 (325)
T cd08264 222 KMADVVINSLGS-SFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLK---- 296 (325)
T ss_pred CCCCEEEECCCH-HHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCC----
Confidence 679999999996 488899999999999999985321 2344444556677777776544 467888999995333
Q ss_pred CceEEEecCChhhHHHHHHHHhcCCCceEE
Q 017868 332 PLVTHRFGFSQKEVEEAFETSARGGTAIKV 361 (365)
Q Consensus 332 ~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~ 361 (365)
..+.+.|++ +++++|++.+.++...+|+
T Consensus 297 ~~~~~~~~~--~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 297 VKVWKTFKL--EEAKEALKELFSKERDGRI 324 (325)
T ss_pred ceeEEEEcH--HHHHHHHHHHHcCCCcccc
Confidence 345677888 9999999999888777775
No 83
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.4e-36 Score=279.98 Aligned_cols=325 Identities=22% Similarity=0.307 Sum_probs=254.4
Q ss_pred ceeEEEecC---CceEEEE-ecCCCCCCCcEEEEEeeeeeCcccHhhhhccccC-----------------CccCCCCcc
Q 017868 18 NMAAWLLGV---NTLKIQP-FELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCA-----------------DFVVKEPMV 76 (365)
Q Consensus 18 ~~~~~~~~~---~~l~~~~-~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~-----------------~~~~~~p~~ 76 (365)
|+++++..+ ..+.+.+ .+.|.+.+++|+|||.++++|++|+....|.... ......|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 467777654 3556654 5777889999999999999999999888764321 012456889
Q ss_pred cCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCC
Q 017868 77 IGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV 156 (365)
Q Consensus 77 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~ 156 (365)
+|||++|+|+++|+++++|++||+|++.+...|+.|..|... ...+. ..+|+|++|+.++++.++++|+++
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~--------~~~~~-~~~g~~~~~~~v~~~~~~~ip~~~ 151 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADI--------DYIGS-ERDGGFAEYTVVPAENAYPVNSPL 151 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccc--------cccCC-CCCccceEEEEecHHHceeCCCCC
Confidence 999999999999999999999999999888888877664321 11221 235999999999999999999999
Q ss_pred Ccchhccch-hhHHHHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC
Q 017868 157 SLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV 234 (365)
Q Consensus 157 ~~~~a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~ 234 (365)
++.+++.++ .+.+||++++..++++|++|||+|+ |++|+++++ +++.+|++ +++++.++ +.+.++++|++.+.+.
T Consensus 152 ~~~~~a~l~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~-~a~~~g~~-vi~~~~~~-~~~~~~~~g~~~~~~~ 228 (350)
T cd08274 152 SDVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQ-LAKRRGAI-VIAVAGAA-KEEAVRALGADTVILR 228 (350)
T ss_pred CHHHHHhcccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHH-HHHhcCCE-EEEEeCch-hhHHHHhcCCeEEEeC
Confidence 998888775 8888999887788999999999998 999999999 99999996 56665555 7888899998754432
Q ss_pred CCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcCcEEEeeccc-
Q 017868 235 STNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY- 312 (365)
Q Consensus 235 ~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~- 312 (365)
....+.. .. .+.+.++|++||++|+. .+..++++++++|+++.+|..... ..++...++.+++++.+....
T Consensus 229 --~~~~~~~--~~--~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (350)
T cd08274 229 --DAPLLAD--AK--ALGGEPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGT 301 (350)
T ss_pred --CCccHHH--HH--hhCCCCCcEEEecCCHH-HHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCC
Confidence 2222222 22 22367899999999974 788999999999999998754322 234444556788888887655
Q ss_pred CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 313 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 313 ~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
.+.+.++++++.++.+ .+.+.+.|++ +++++|++.+.++...+|+|+++
T Consensus 302 ~~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 302 REVFRRLVRYIEEGEI--RPVVAKTFPL--SEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred HHHHHHHHHHHHCCCc--ccccccccCH--HHHHHHHHHHhcCCCceEEEEeC
Confidence 5678999999999988 4556777877 99999999999888899999864
No 84
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=4.5e-36 Score=274.31 Aligned_cols=325 Identities=26% Similarity=0.410 Sum_probs=265.6
Q ss_pred eeEEEecC-CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCC
Q 017868 19 MAAWLLGV-NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97 (365)
Q Consensus 19 ~~~~~~~~-~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~ 97 (365)
|++++.++ ..+++.+.|.|.+.++||+|++.++++|+.|+....|... ...+|.++|+|++|+|+++|+++++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~v~~~g~~~~~~~~ 77 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWG---GSKYPLVPGHEIVGEVVEVGAGVEGRKV 77 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCC---CCCCCcccCccceEEEEEECCCCccccc
Confidence 46777776 6899999999999999999999999999999998876532 1345778999999999999999999999
Q ss_pred CCEEEEcCC-cCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHH
Q 017868 98 GDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR 175 (365)
Q Consensus 98 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~ 175 (365)
||+|+..+. .+|++|++|..+..++|++....+. ...|+|++|+.+++++++++|+++++++++.+. ...+|+++++
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~ 156 (330)
T cd08245 78 GDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGY-TTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALR 156 (330)
T ss_pred CCEEEEccccCCCCCChhhhCcCcccCcCccccCc-ccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence 999987543 6799999999999999998655443 246899999999999999999999999988765 6778998887
Q ss_pred hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868 176 RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTG 255 (365)
Q Consensus 176 ~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 255 (365)
..+++++++|||+|+|.+|+++++ +++..|+ .++++++++++.++++++|++.+++... .+... . ..++
T Consensus 157 ~~~~~~~~~vlI~g~g~iG~~~~~-~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~---~----~~~~ 225 (330)
T cd08245 157 DAGPRPGERVAVLGIGGLGHLAVQ-YARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA--ELDEQ---A----AAGG 225 (330)
T ss_pred hhCCCCCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC--cchHH---h----ccCC
Confidence 788999999999988889999999 9999999 5778788899999999999887765432 22211 1 1357
Q ss_pred ceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc-cccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCCCCc
Q 017868 256 IDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDVKPL 333 (365)
Q Consensus 256 ~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~ 333 (365)
+|+++|+++.......++++++++|+++.++...... .+....+..++.++.+.... .+.+++++++++++.+. +
T Consensus 226 ~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~--~- 302 (330)
T cd08245 226 ADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVK--P- 302 (330)
T ss_pred CCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCc--c-
Confidence 9999999887678889999999999999997542221 22233466677888777654 56788899999999984 3
Q ss_pred eEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868 334 VTHRFGFSQKEVEEAFETSARGGTAIKVMF 363 (365)
Q Consensus 334 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi 363 (365)
..+.|++ +++.+|++.+.++...+|+|+
T Consensus 303 ~~~~~~~--~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 303 MIETFPL--DQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred eEEEEcH--HHHHHHHHHHHcCCCCcceeC
Confidence 4467777 999999999999999999875
No 85
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=5.8e-36 Score=270.24 Aligned_cols=298 Identities=37% Similarity=0.638 Sum_probs=245.6
Q ss_pred ceeEEEecC--CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868 18 NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (365)
Q Consensus 18 ~~~~~~~~~--~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (365)
|++++..++ ..+++.+++.|++.++||+|||.++++|+.|+....|... ....|.++|+|++|+|+++|++++.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~ 77 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD---PVETPVVLGHEFSGTIVEVGPDVEGW 77 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC---cCCCCeeeccceEEEEEEECCCcCcC
Confidence 367777743 4699999999999999999999999999999988876431 13457889999999999999999999
Q ss_pred CCCCEEEEcCC-cCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHH
Q 017868 96 VPGDRVALEPG-ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC 174 (365)
Q Consensus 96 ~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~ 174 (365)
++||+|++.+. .+|+.|++|..+..+.|+.....+ ....|+|++|+.+++.+++++|+++++++++...++.+|++++
T Consensus 78 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~a~~~l 156 (306)
T cd08258 78 KVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIG-TQADGGFAEYVLVPEESLHELPENLSLEAAALTEPLAVAVHAV 156 (306)
T ss_pred CCCCEEEEccCcCCCCCCcchhCcCcccCCCCceee-ecCCCceEEEEEcchHHeEECcCCCCHHHHHhhchHHHHHHHH
Confidence 99999999874 789999999999998897643333 2346999999999999999999999999888556888899987
Q ss_pred -HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEE--eCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868 175 -RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIV--DVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 175 -~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
..++++++++|||.|+|.+|+++++ +++..|++ ++.+ ++++++.++++++|++.+ ++ ...++...+.+..
T Consensus 157 ~~~~~~~~g~~vlI~g~g~~g~~~~~-la~~~G~~-v~~~~~~~~~~~~~~~~~~g~~~~-~~--~~~~~~~~l~~~~-- 229 (306)
T cd08258 157 AERSGIRPGDTVVVFGPGPIGLLAAQ-VAKLQGAT-VVVVGTEKDEVRLDVAKELGADAV-NG--GEEDLAELVNEIT-- 229 (306)
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCE-EEEECCCCCHHHHHHHHHhCCccc-CC--CcCCHHHHHHHHc--
Confidence 5688999999999888999999999 99999996 5454 345668888899999776 54 3456767666553
Q ss_pred hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC-CCccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcC
Q 017868 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSG 326 (365)
Q Consensus 252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g 326 (365)
.+.++|++||++|....+...+++|+++|+++.+|... ....++...++++++++.|++.. .++++++++++++|
T Consensus 230 ~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 306 (306)
T cd08258 230 DGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG 306 (306)
T ss_pred CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhcC
Confidence 25789999999987678889999999999999998754 23444566778899999999876 67799999998865
No 86
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=4.5e-35 Score=266.94 Aligned_cols=311 Identities=25% Similarity=0.299 Sum_probs=248.6
Q ss_pred ceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868 18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (365)
Q Consensus 18 ~~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (365)
|+++++.++ ..+++.+.+.|.+.++||+|+|.++++|+.|+....|..........|.++|+|++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 567777753 46777788888889999999999999999999888775322222355788999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (365)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~ 173 (365)
+++||+|++... ...|+|++|+.++.++++++|+++++++++.++ .+.+|+..
T Consensus 81 ~~~Gd~V~~~~~--------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~ 134 (324)
T cd08244 81 AWLGRRVVAHTG--------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGL 134 (324)
T ss_pred CCCCCEEEEccC--------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHH
Confidence 999999988521 135899999999999999999999999988775 67778655
Q ss_pred HHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868 174 CRRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 252 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~ 252 (365)
++.++++++++|||+|+ |.+|+++++ +++..|+ .++++++++++.+.++++|++.+++.. ..++.+.+.+.. .
T Consensus 135 ~~~~~~~~~~~vlI~g~~~~~g~~~~~-la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~ 208 (324)
T cd08244 135 LDLATLTPGDVVLVTAAAGGLGSLLVQ-LAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYT--RPDWPDQVREAL--G 208 (324)
T ss_pred HHhcCCCCCCEEEEEcCCchHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEecC--CccHHHHHHHHc--C
Confidence 57788999999999986 999999999 9999999 578888889999999999998776643 345655555443 2
Q ss_pred CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcCcEEEeeccc-------CCcHHHHHHHHH
Q 017868 253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-------KNTWPLCLELLR 324 (365)
Q Consensus 253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~l~ 324 (365)
+.++|+++|++|+. ....++++++++|+++.+|..... ..++...+..++..+.+.... .+.+.+++++++
T Consensus 209 ~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 287 (324)
T cd08244 209 GGGVTVVLDGVGGA-IGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAA 287 (324)
T ss_pred CCCceEEEECCChH-hHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHH
Confidence 56899999999976 568899999999999999854322 123333456777777766432 245778899999
Q ss_pred cCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 325 SGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 325 ~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
++.+ .+.+.+.|++ +++.+|++.+.++...+|+++++
T Consensus 288 ~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 288 AGRL--VPVVGQTFPL--ERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred CCCc--cCccceEEeH--HHHHHHHHHHHcCCCCceEEEeC
Confidence 9988 4456678888 99999999999999999999874
No 87
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=5.1e-35 Score=265.15 Aligned_cols=301 Identities=29% Similarity=0.454 Sum_probs=243.5
Q ss_pred ecCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhh-hccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEE
Q 017868 24 LGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYL-KTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102 (365)
Q Consensus 24 ~~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~-~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~ 102 (365)
.+++.+++.+++.|++.++||+|||.++++|+.|+..+ .|..... ...+|.++|+|++|+|+++|++++++++||+|+
T Consensus 2 ~~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~-~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 80 (312)
T cd08269 2 TGPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFV-YPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA 80 (312)
T ss_pred CCCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcc-cCCCCcccceeeEEEEEEECCCCcCCCCCCEEE
Confidence 35568999999999999999999999999999999877 5532211 123477899999999999999999999999998
Q ss_pred EcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccc-hhhHHHHHHHHhcCCCC
Q 017868 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMC-EPLSVGLHACRRANIGP 181 (365)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~-~~~~~a~~~~~~~~~~~ 181 (365)
++ ..|+|++|+.++++.++++|+++ ..++.. .++.+++++++.+++++
T Consensus 81 ~~-----------------------------~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~~~~~~~ 129 (312)
T cd08269 81 GL-----------------------------SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFRRGWIRA 129 (312)
T ss_pred Ee-----------------------------cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHHhcCCCC
Confidence 75 24889999999999999999998 233333 57788888888888999
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 261 (365)
Q Consensus 182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 261 (365)
++++||+|+|.+|+++++ +++..|++.++++.+++++.++++++|++.+++. ...++.+.+.++.. +.++|+++|
T Consensus 130 ~~~vlI~g~g~vg~~~~~-la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~l~~~~~--~~~vd~vld 204 (312)
T cd08269 130 GKTVAVIGAGFIGLLFLQ-LAAAAGARRVIAIDRRPARLALARELGATEVVTD--DSEAIVERVRELTG--GAGADVVIE 204 (312)
T ss_pred CCEEEEECCCHHHHHHHH-HHHHcCCcEEEEECCCHHHHHHHHHhCCceEecC--CCcCHHHHHHHHcC--CCCCCEEEE
Confidence 999999988999999999 9999999657778888889999999999877653 33567677766532 578999999
Q ss_pred CCCCHHHHHHHHHhcccCCEEEEEccCC-CCccccchHhhhcCcEEEeeccc-----CCcHHHHHHHHHcCCCCCCCceE
Q 017868 262 CAGLNKTMSTALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRY-----KNTWPLCLELLRSGKIDVKPLVT 335 (365)
Q Consensus 262 ~~g~~~~~~~~~~~l~~~G~~~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~l~~g~~~~~~~~~ 335 (365)
+.|........+++|+++|+++.+|... ....+......++++++.+.... .+.+++++++++++.+.+.....
T Consensus 205 ~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 284 (312)
T cd08269 205 AVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLT 284 (312)
T ss_pred CCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhhee
Confidence 9987778889999999999999998543 22233444667888888776543 35789999999999985333456
Q ss_pred EEecCChhhHHHHHHHHhcCC-CceEEEE
Q 017868 336 HRFGFSQKEVEEAFETSARGG-TAIKVMF 363 (365)
Q Consensus 336 ~~~~~~~~~~~~a~~~~~~~~-~~gk~vi 363 (365)
+.|++ +++.+|++.+.+++ .++|+++
T Consensus 285 ~~~~~--~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 285 HEFPL--EELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred eeecH--HHHHHHHHHHHhCCCCceEEEe
Confidence 77888 99999999998884 4789886
No 88
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=4.5e-35 Score=268.37 Aligned_cols=298 Identities=19% Similarity=0.302 Sum_probs=235.4
Q ss_pred CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcC
Q 017868 26 VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEP 105 (365)
Q Consensus 26 ~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 105 (365)
++.++..++|.|+++++||+|||.++++|+.|+....|... ...+|.++|+|++|+|+++|++++.|++||+|++..
T Consensus 14 ~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 90 (336)
T TIGR02817 14 PDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAP---EAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAG 90 (336)
T ss_pred cccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCC---CCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcC
Confidence 45788899999999999999999999999999988876421 134577899999999999999999999999998742
Q ss_pred CcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH-HhcCCCC--
Q 017868 106 GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGP-- 181 (365)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~-- 181 (365)
. ....|+|++|+.++++.++++|+++++++++.++ ...+||+++ ...++++
T Consensus 91 ~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~ 145 (336)
T TIGR02817 91 D-------------------------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPV 145 (336)
T ss_pred C-------------------------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCC
Confidence 1 0135899999999999999999999999998886 778899988 5677776
Q ss_pred ---CCEEEEEcC-CHHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868 182 ---ETNVLIMGA-GPIGLVTMLGAPRAF-GAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 182 ---g~~vlI~G~-g~~G~~ai~~l~~~~-g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 256 (365)
|++|||+|+ |++|++++| +++.+ |+ .++++.+++++.++++++|+++++++. .++...+++. .++++
T Consensus 146 ~~~g~~vlV~ga~g~vg~~~~~-~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~---~~~~~~i~~~---~~~~v 217 (336)
T TIGR02817 146 AGDKRALLIIGGAGGVGSILIQ-LARQLTGL-TVIATASRPESQEWVLELGAHHVIDHS---KPLKAQLEKL---GLEAV 217 (336)
T ss_pred CCCCCEEEEEcCCcHHHHHHHH-HHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECC---CCHHHHHHHh---cCCCC
Confidence 999999986 999999999 99987 98 577777888899999999998887753 2566666652 35689
Q ss_pred eEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-------------CCcHHHHHHHH
Q 017868 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-------------KNTWPLCLELL 323 (365)
Q Consensus 257 d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-------------~~~~~~~~~~l 323 (365)
|+++|+++........+++++++|+++.++.. ..++...+..+++.+.+.... ...++++++++
T Consensus 218 d~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 294 (336)
T TIGR02817 218 SYVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLV 294 (336)
T ss_pred CEEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHH
Confidence 99999987666888999999999999987432 122333333344444432110 13578899999
Q ss_pred HcCCCCCCCceEEEec-CChhhHHHHHHHHhcCCCceEEEEe
Q 017868 324 RSGKIDVKPLVTHRFG-FSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 324 ~~g~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
+++.+. +.+.+.++ ++++++.+|++.+.+++..||++++
T Consensus 295 ~~~~l~--~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 295 DAGKIR--TTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred HCCCee--ccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 999883 44444454 2348999999999999889999875
No 89
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=8e-35 Score=267.22 Aligned_cols=311 Identities=23% Similarity=0.332 Sum_probs=244.4
Q ss_pred ceeEEEecCCc----eEEEEecCCCCCC-CcEEEEEeeeeeCcccHhhhhccccCCcc--CCCCcccCccceEEEEEeCC
Q 017868 18 NMAAWLLGVNT----LKIQPFELPSLGP-YDVLVRMKAVGICGSDVHYLKTLRCADFV--VKEPMVIGHECAGVIEKVGS 90 (365)
Q Consensus 18 ~~~~~~~~~~~----l~~~~~~~p~~~~-~eVlI~v~~~~l~~~D~~~~~g~~~~~~~--~~~p~~~G~e~~G~V~~vG~ 90 (365)
|+++++.+++. +.+.+.|.|+|.+ +||+||+.++++|+.|+..+.|....... ...|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 67888886643 8999999999887 99999999999999999988765321110 11577899999999999999
Q ss_pred CCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHH
Q 017868 91 EVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSV 169 (365)
Q Consensus 91 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~ 169 (365)
++..|++||+|++... ..|+|++|+.++++.++++|+++++++++.++ ...+
T Consensus 81 ~v~~~~~Gd~V~~~~~---------------------------~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~t 133 (341)
T cd08290 81 GVKSLKPGDWVIPLRP---------------------------GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCT 133 (341)
T ss_pred CCCCCCCCCEEEecCC---------------------------CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHH
Confidence 9999999999987521 24899999999999999999999999988876 7788
Q ss_pred HHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh----hHHHHHHHcCCCEEEeCCCC-cccHH
Q 017868 170 GLHACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD----YRLSVAKEIGADNIVKVSTN-LQDIA 242 (365)
Q Consensus 170 a~~~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~----~~~~~~~~~g~~~~~~~~~~-~~~~~ 242 (365)
|++++. ...+++|++|||+|+ |++|+++++ +++..|++.++.+ +++ ++.++++++|++.+++.... ..++.
T Consensus 134 a~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~-~a~~~g~~v~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 211 (341)
T cd08290 134 AYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQ-LAKLLGIKTINVV-RDRPDLEELKERLKALGADHVLTEEELRSLLAT 211 (341)
T ss_pred HHHHHHhhcccCCCCEEEEccchhHHHHHHHH-HHHHcCCeEEEEE-cCCCcchhHHHHHHhcCCCEEEeCcccccccHH
Confidence 999984 478899999999987 999999999 9999999654444 444 67888889999988775331 01455
Q ss_pred HHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc---------
Q 017868 243 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY--------- 312 (365)
Q Consensus 243 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~--------- 312 (365)
..++... ++++|++|||+|+. .....+++++++|+++.+|.... ...++....+.++.++.+....
T Consensus 212 ~~i~~~~---~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (341)
T cd08290 212 ELLKSAP---GGRPKLALNCVGGK-SATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPE 287 (341)
T ss_pred HHHHHHc---CCCceEEEECcCcH-hHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHH
Confidence 5555442 23899999999976 66778999999999999974322 2233443456788888876532
Q ss_pred --CCcHHHHHHHHHcCCCCCCCceEEEe---cCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 313 --KNTWPLCLELLRSGKIDVKPLVTHRF---GFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 313 --~~~~~~~~~~l~~g~~~~~~~~~~~~---~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
.+.+.++++++.++.+. +...+.+ ++ +++.+|++.+.++...+|+|++.
T Consensus 288 ~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 288 EKEDMLEELAELIREGKLK--APPVEKVTDDPL--EEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred HHHHHHHHHHHHHHcCCcc--CCcccccccCCH--HHHHHHHHHHhhcCCCCeEEEeC
Confidence 12578899999999884 3344455 66 99999999999998999999863
No 90
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.7e-34 Score=261.31 Aligned_cols=309 Identities=22% Similarity=0.315 Sum_probs=245.0
Q ss_pred cceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868 17 VNMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93 (365)
Q Consensus 17 ~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 93 (365)
||||+++...+ .+++.+.+.|.+.++||+|||.++++|+.|.....|.... ....|.++|+|++|+|+++|++++
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~v~ 78 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP--PPGSSEILGLEVAGYVEDVGSDVK 78 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccceeeEEEEEEeCCCCC
Confidence 58899988654 6777888888899999999999999999998887764321 123456899999999999999999
Q ss_pred CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHH
Q 017868 94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLH 172 (365)
Q Consensus 94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~ 172 (365)
++++||+|+++. .+|+|++|++++.++++++|+++++.+++.+. ++.+|++
T Consensus 79 ~~~~Gd~V~~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~ 130 (334)
T PTZ00354 79 RFKEGDRVMALL----------------------------PGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQ 130 (334)
T ss_pred CCCCCCEEEEec----------------------------CCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 999999998751 24899999999999999999999998888765 7788999
Q ss_pred HHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868 173 ACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 173 ~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
++. .+.+++|++|||+|+ |.+|+++++ +++..|++. +.+.+++++.+.++++|++.+++.... .++.+.+++..
T Consensus 131 ~l~~~~~~~~~~~vlI~ga~g~~g~~~~~-~a~~~g~~v-~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~- 206 (334)
T PTZ00354 131 LLKKHGDVKKGQSVLIHAGASGVGTAAAQ-LAEKYGAAT-IITTSSEEKVDFCKKLAAIILIRYPDE-EGFAPKVKKLT- 206 (334)
T ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHH-HHHHcCCEE-EEEeCCHHHHHHHHHcCCcEEEecCCh-hHHHHHHHHHh-
Confidence 985 478999999999986 999999999 999999964 457788899998899999877764321 12555565543
Q ss_pred HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-Ccc-ccchHhhhcCcEEEeecccC-----------CcHH
Q 017868 251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMT-VPLTPAAVREVDVVGVFRYK-----------NTWP 317 (365)
Q Consensus 251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~-~~~~~~~~~~~~i~~~~~~~-----------~~~~ 317 (365)
.+.++|++||++|. ..+..++++++++|+++.++.... ... +....+..+..++.+..... +.++
T Consensus 207 -~~~~~d~~i~~~~~-~~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (334)
T PTZ00354 207 -GEKGVNLVLDCVGG-SYLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFER 284 (334)
T ss_pred -CCCCceEEEECCch-HHHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHH
Confidence 25789999999986 488899999999999999875332 211 44444555666777754321 2346
Q ss_pred HHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 318 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 318 ~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+++++++++.+. +.+.+.+++ +++.++++.+.++...+|+|+++
T Consensus 285 ~~~~~~~~~~l~--~~~~~~~~~--~~~~~~~~~~~~~~~~~kvvv~~ 328 (334)
T PTZ00354 285 EVLPYMEEGEIK--PIVDRTYPL--EEVAEAHTFLEQNKNIGKVVLTV 328 (334)
T ss_pred HHHHHHHCCCcc--CccccEEcH--HHHHHHHHHHHhCCCCceEEEec
Confidence 788999999884 446677888 99999999999888889999864
No 91
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1e-33 Score=259.33 Aligned_cols=329 Identities=27% Similarity=0.371 Sum_probs=260.9
Q ss_pred ceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868 18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (365)
Q Consensus 18 ~~~~~~~~---~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (365)
|+++++.. .+.+++.+.+.|.+.++|++|++.++++|+.|+....|..... ...|.++|||++|+|+.+|+++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~ 78 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPP--VKDPLIPLSDGAGEVVAVGEGVTR 78 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCC--CCCCcccccceeEEEEEeCCCCcC
Confidence 57788773 3678888888888999999999999999999999887643222 235788999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (365)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~ 173 (365)
|++||+|++.....|+.+.+|. |......+ ...+|+|++|+.++.+.++++|+++++.+++.+. .+.+|+++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~------~~~~~~~~-~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~ 151 (336)
T cd08276 79 FKVGDRVVPTFFPNWLDGPPTA------EDEASALG-GPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNA 151 (336)
T ss_pred CCCCCEEEEecccccccccccc------cccccccc-cccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHH
Confidence 9999999998766665554432 22221222 2347899999999999999999999998888776 77889988
Q ss_pred HH-hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868 174 CR-RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 252 (365)
Q Consensus 174 ~~-~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~ 252 (365)
+. .+.+++|++|+|+|+|++|+++++ +++..|++ ++.++.++++.+.++++|++.+++... ..++...++... .
T Consensus 152 l~~~~~~~~g~~vli~g~g~~g~~~~~-~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~--~ 226 (336)
T cd08276 152 LFGLGPLKPGDTVLVQGTGGVSLFALQ-FAKAAGAR-VIATSSSDEKLERAKALGADHVINYRT-TPDWGEEVLKLT--G 226 (336)
T ss_pred HHhhcCCCCCCEEEEECCcHHHHHHHH-HHHHcCCE-EEEEeCCHHHHHHHHHcCCCEEEcCCc-ccCHHHHHHHHc--C
Confidence 74 578999999999988999999999 99999995 777778889999998899888776432 145666666553 2
Q ss_pred CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcCcEEEeeccc-CCcHHHHHHHHHcCCCCC
Q 017868 253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-KNTWPLCLELLRSGKIDV 330 (365)
Q Consensus 253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~ 330 (365)
+.++|+++|+++. .....++++++++|+++.+|..... ..........+++++.+.... ...+.+++++++++.+.
T Consensus 227 ~~~~d~~i~~~~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~- 304 (336)
T cd08276 227 GRGVDHVVEVGGP-GTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIR- 304 (336)
T ss_pred CCCCcEEEECCCh-HHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcc-
Confidence 5789999999985 4788999999999999999854332 223344556788888887643 56788899999988873
Q ss_pred CCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 331 KPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 331 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+...+.|++ +++.++++.+.++...+|+++++
T Consensus 305 -~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 305 -PVIDRVFPF--EEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred -cccCcEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence 445577777 99999999999888889999874
No 92
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.2e-34 Score=256.83 Aligned_cols=293 Identities=24% Similarity=0.302 Sum_probs=237.2
Q ss_pred ceeEEEec--CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868 18 NMAAWLLG--VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (365)
Q Consensus 18 ~~~~~~~~--~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (365)
|+++++.+ +..+++.+.+.|.+.++||+||+.++++|+.|+....+ ...|.++|+|++|+|+++|++++.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~-------~~~~~~~g~e~~G~v~~~G~~v~~~ 73 (305)
T cd08270 1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE-------RPDGAVPGWDAAGVVERAAADGSGP 73 (305)
T ss_pred CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc-------CCCCCcccceeEEEEEEeCCCCCCC
Confidence 46666665 45788889999999999999999999999999876542 1236689999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH
Q 017868 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (365)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~ 174 (365)
++||+|+++. ..|+|++|+.++.++++++|+++++++++.++ .+.+||+++
T Consensus 74 ~~Gd~V~~~~----------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~ 125 (305)
T cd08270 74 AVGARVVGLG----------------------------AMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRAL 125 (305)
T ss_pred CCCCEEEEec----------------------------CCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHH
Confidence 9999998751 25899999999999999999999999988886 778999998
Q ss_pred HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868 175 RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~ 253 (365)
......+|++|+|+|+ |++|+++++ +++..|+ .++.+++++++.+.++++|++..+.... + + .+
T Consensus 126 ~~~~~~~~~~vli~g~~~~~g~~~~~-~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~-------~---~~ 190 (305)
T cd08270 126 RRGGPLLGRRVLVTGASGGVGRFAVQ-LAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS---E-------L---SG 190 (305)
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc---c-------c---cC
Confidence 6544446999999987 999999999 9999999 5788888899999999999875543211 1 1 13
Q ss_pred CCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhh--cCcEEEeeccc-----CCcHHHHHHHHHc
Q 017868 254 TGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAV--REVDVVGVFRY-----KNTWPLCLELLRS 325 (365)
Q Consensus 254 ~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~--~~~~i~~~~~~-----~~~~~~~~~~l~~ 325 (365)
+++|+++|++|.. .+...+++++.+|+++.+|..... ...+...+.. ++.++.+.... .+.+..+++++++
T Consensus 191 ~~~d~vl~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (305)
T cd08270 191 APVDLVVDSVGGP-QLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAA 269 (305)
T ss_pred CCceEEEECCCcH-HHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHC
Confidence 5799999999975 788999999999999999854321 2233333333 57777776543 3567889999999
Q ss_pred CCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 326 GKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 326 g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+++. +.+.+++++ +++++|++.+.++...||+|+++
T Consensus 270 ~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 270 GRLD--PRIGWRGSW--TEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred CCcc--ceeccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence 9994 446678888 99999999999999999999875
No 93
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=4.5e-34 Score=260.71 Aligned_cols=309 Identities=25% Similarity=0.277 Sum_probs=241.9
Q ss_pred cceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868 17 VNMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93 (365)
Q Consensus 17 ~~~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 93 (365)
+|+++.+.++ ..+++.+++.|.+.++||+|||.++++|+.|+....|.... ...|.++|+|++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~vG~~v~ 77 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP---PSLPSGLGTEAAGVVSKVGSGVK 77 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC---CCCCCccCcceEEEEEEeCCCCC
Confidence 4677777643 58999999999999999999999999999999887664321 23477899999999999999999
Q ss_pred CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHH
Q 017868 94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLH 172 (365)
Q Consensus 94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~ 172 (365)
.+++||+|+... ...|+|++|+.++.+.++++|+++++++++.++ .+.+|+.
T Consensus 78 ~~~~Gd~V~~~~---------------------------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~ 130 (327)
T PRK10754 78 HIKVGDRVVYAQ---------------------------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYY 130 (327)
T ss_pred CCCCCCEEEECC---------------------------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHH
Confidence 999999997531 134899999999999999999999999888765 6778888
Q ss_pred HHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868 173 ACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 173 ~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
++. .+++++|++|+|+|+ |.+|+++++ +++..|++ +++++.++++.++++++|++.+++. ...++.+.+++.+.
T Consensus 131 ~l~~~~~~~~g~~vlI~g~~g~ig~~~~~-lak~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~ 206 (327)
T PRK10754 131 LLRKTYEIKPDEQFLFHAAAGGVGLIACQ-WAKALGAK-LIGTVGSAQKAQRAKKAGAWQVINY--REENIVERVKEITG 206 (327)
T ss_pred HHHhhcCCCCCCEEEEEeCCcHHHHHHHH-HHHHcCCE-EEEEeCCHHHHHHHHHCCCCEEEcC--CCCcHHHHHHHHcC
Confidence 874 578999999999975 999999999 99999995 7777788999999999999887764 33566666666543
Q ss_pred HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcC------cEEEeeccc----CCcHHHH
Q 017868 251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVRE------VDVVGVFRY----KNTWPLC 319 (365)
Q Consensus 251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~------~~i~~~~~~----~~~~~~~ 319 (365)
+.++|++|||+|. ......+++++++|+++.+|..... .......+..++ ..+.+.... .+.+.++
T Consensus 207 --~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (327)
T PRK10754 207 --GKKVRVVYDSVGK-DTWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNEL 283 (327)
T ss_pred --CCCeEEEEECCcH-HHHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHH
Confidence 6789999999996 4778899999999999999854322 112222222111 112121111 2235568
Q ss_pred HHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 320 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 320 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
++++.++.+.+.....+.|++ +++.++++.+.++...+|+|+.
T Consensus 284 ~~~l~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 284 FSLIASGVIKVDVAEQQKFPL--KDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred HHHHHCCCeeeecccCcEEcH--HHHHHHHHHHHcCCCcceEEEe
Confidence 899999998544445677888 9999999999999999999986
No 94
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1e-34 Score=261.29 Aligned_cols=299 Identities=26% Similarity=0.409 Sum_probs=226.2
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCc-cCCCCcccCccceEE---EEEeC-CCCCCCCCCCEE
Q 017868 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADF-VVKEPMVIGHECAGV---IEKVG-SEVKTLVPGDRV 101 (365)
Q Consensus 27 ~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~-~~~~p~~~G~e~~G~---V~~vG-~~v~~~~~Gd~V 101 (365)
......+.++|.|++++++|++.++++||.|+.+..|...... ...+|.+.+.++.|+ +...| ..+..+..||++
T Consensus 18 ~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~ 97 (347)
T KOG1198|consen 18 EVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAV 97 (347)
T ss_pred ceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEE
Confidence 4555578999999999999999999999999999988654332 125665555544444 44455 334446666655
Q ss_pred EEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHH-hc--
Q 017868 102 ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACR-RA-- 177 (365)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~-~~-- 177 (365)
... ...|+|+||+++++..++++|+++++++|+.++ .+.|||.++. ..
T Consensus 98 ~~~----------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~ 149 (347)
T KOG1198|consen 98 VAF----------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPG 149 (347)
T ss_pred eec----------------------------cCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhcccc
Confidence 442 356999999999999999999999999999998 8889999984 56
Q ss_pred ----CCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868 178 ----NIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 252 (365)
Q Consensus 178 ----~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~ 252 (365)
++++|++|||+|+ |++|++++| +|+..++. .+++.+++++.++++++|++.+++|+. +++.+.++..+
T Consensus 150 ~~~~~~~~g~~vLv~ggsggVG~~aiQ-lAk~~~~~-~v~t~~s~e~~~l~k~lGAd~vvdy~~--~~~~e~~kk~~--- 222 (347)
T KOG1198|consen 150 KRSKKLSKGKSVLVLGGSGGVGTAAIQ-LAKHAGAI-KVVTACSKEKLELVKKLGADEVVDYKD--ENVVELIKKYT--- 222 (347)
T ss_pred ccccccCCCCeEEEEeCCcHHHHHHHH-HHHhcCCc-EEEEEcccchHHHHHHcCCcEeecCCC--HHHHHHHHhhc---
Confidence 7999999999976 899999999 99999964 455568999999999999999999865 67777766543
Q ss_pred CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC---CCcccc-----chHhh-----hcCcEEEeec--ccCCcHH
Q 017868 253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH---HEMTVP-----LTPAA-----VREVDVVGVF--RYKNTWP 317 (365)
Q Consensus 253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~---~~~~~~-----~~~~~-----~~~~~i~~~~--~~~~~~~ 317 (365)
+.++|+||||+|+. .......++...|+...++... .+...+ ...+. .+........ ...+.++
T Consensus 223 ~~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 301 (347)
T KOG1198|consen 223 GKGVDVVLDCVGGS-TLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLK 301 (347)
T ss_pred CCCccEEEECCCCC-ccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHH
Confidence 68999999999986 6677778888887654443221 111111 00000 1111111111 1156788
Q ss_pred HHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 318 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 318 ~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
.+.++++.+++ +|.+.+.|++ +++.+|++.+.++...||+++.+
T Consensus 302 ~l~~~ie~gki--kp~i~~~~p~--~~~~ea~~~~~~~~~~GK~vl~~ 345 (347)
T KOG1198|consen 302 ALVELIEKGKI--KPVIDSVYPF--SQAKEAFEKLEKSHATGKVVLEK 345 (347)
T ss_pred HHHHHHHcCcc--cCCcceeeeH--HHHHHHHHHHhhcCCcceEEEEe
Confidence 99999999977 8999999999 99999999999999999999863
No 95
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=9.2e-34 Score=239.06 Aligned_cols=294 Identities=18% Similarity=0.189 Sum_probs=234.8
Q ss_pred cCCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeC--CCCCCCCCCCEEE
Q 017868 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG--SEVKTLVPGDRVA 102 (365)
Q Consensus 25 ~~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~ 102 (365)
..++++++++++|+|+++|||+|..|.+++|. +.|.+........|+-+|-..+|-++... ++..+|++||.|+
T Consensus 23 ~~d~F~lee~~vp~p~~GqvLl~~~ylS~DPy----mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~ 98 (340)
T COG2130 23 VPDDFRLEEVDVPEPGEGQVLLRTLYLSLDPY----MRGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVV 98 (340)
T ss_pred CCCCceeEeccCCCCCcCceEEEEEEeccCHH----HeecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEE
Confidence 34689999999999999999999999999993 33433222234557777766655444322 6678899999998
Q ss_pred EcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCC---CcchhccchhhHHHHHHH-HhcC
Q 017868 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV---SLEEGAMCEPLSVGLHAC-RRAN 178 (365)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~---~~~~a~~~~~~~~a~~~~-~~~~ 178 (365)
.. .+|+||..++.+.+.+++++. ++....+-++..|||.++ +.++
T Consensus 99 ~~-------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igq 147 (340)
T COG2130 99 GV-------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQ 147 (340)
T ss_pred ec-------------------------------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcC
Confidence 75 689999999999999998653 333333446899999998 6799
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868 179 IGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 179 ~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 256 (365)
.++|++|+|.+| |++|..+.| +|+..|+ +|+++..+++|.+++++ +|.+.+++|.. +++.+.+++. ++.++
T Consensus 148 pk~GetvvVSaAaGaVGsvvgQ-iAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~~L~~a---~P~GI 220 (340)
T COG2130 148 PKAGETVVVSAAAGAVGSVVGQ-IAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQALKEA---CPKGI 220 (340)
T ss_pred CCCCCEEEEEecccccchHHHH-HHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHHHHHHH---CCCCe
Confidence 999999999986 999999999 9999999 79999999999999987 99999999855 5887777664 58999
Q ss_pred eEEEeCCCCHHHHHHHHHhcccCCEEEEEccC---CCC-c---cccchHhhhcCcEEEeeccc-------CCcHHHHHHH
Q 017868 257 DVSFDCAGLNKTMSTALGATCAGGKVCLVGMG---HHE-M---TVPLTPAAVREVDVVGVFRY-------KNTWPLCLEL 322 (365)
Q Consensus 257 d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~---~~~-~---~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~ 322 (365)
|+.||++|++ .++..+..|+..+++..+|.- +.+ . ...+..++.+++++.|+... .+..+++..|
T Consensus 221 DvyfeNVGg~-v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~w 299 (340)
T COG2130 221 DVYFENVGGE-VLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGW 299 (340)
T ss_pred EEEEEcCCch-HHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHH
Confidence 9999999986 999999999999999999832 111 1 11222356778999998752 3557889999
Q ss_pred HHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 323 LRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 323 l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+.+|++..+. +-+-.| |++.+||.-+.+++.+||+|+.+
T Consensus 300 v~~GKi~~~e--ti~dGl--EnaP~Af~gLl~G~N~GK~vvKv 338 (340)
T COG2130 300 VKEGKIQYRE--TIVDGL--ENAPEAFIGLLSGKNFGKLVVKV 338 (340)
T ss_pred HHcCceeeEe--eehhhh--hccHHHHHHHhcCCccceEEEEe
Confidence 9999995544 333457 99999999999999999999874
No 96
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=3.5e-33 Score=255.06 Aligned_cols=305 Identities=22% Similarity=0.272 Sum_probs=239.0
Q ss_pred ceeEEEecC-----CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCC
Q 017868 18 NMAAWLLGV-----NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEV 92 (365)
Q Consensus 18 ~~~~~~~~~-----~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v 92 (365)
|+++++.++ +.+++++++.|.+.++||+|||.++++|+.|+....|..... ..+|.++|+|++|+|+.+|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~--~~~p~~~g~e~~G~v~~vG~~v 79 (329)
T cd08250 2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG--VKPPFDCGFEGVGEVVAVGEGV 79 (329)
T ss_pred ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC--CCCCcccCceeEEEEEEECCCC
Confidence 677777743 468899999999999999999999999999999877643211 3568899999999999999999
Q ss_pred CCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccchhhHHHHH
Q 017868 93 KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH 172 (365)
Q Consensus 93 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~ 172 (365)
+++++||+|++. ..|+|++|+.++.+.++++|++. .+.++....+.+||+
T Consensus 80 ~~~~~Gd~V~~~-----------------------------~~g~~~s~~~v~~~~~~~ip~~~-~~~a~l~~~~~ta~~ 129 (329)
T cd08250 80 TDFKVGDAVATM-----------------------------SFGAFAEYQVVPARHAVPVPELK-PEVLPLLVSGLTASI 129 (329)
T ss_pred CCCCCCCEEEEe-----------------------------cCcceeEEEEechHHeEECCCCc-chhhhcccHHHHHHH
Confidence 999999999875 24899999999999999999973 233333448889999
Q ss_pred HHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868 173 ACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 173 ~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
++. ..++++|+++||+|+ |.+|+++++ +++..|++ ++++.+++++.+.++++|++.+++... .++.+.+...
T Consensus 130 ~l~~~~~~~~~~~vlI~ga~g~ig~~~~~-~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~-- 203 (329)
T cd08250 130 ALEEVGEMKSGETVLVTAAAGGTGQFAVQ-LAKLAGCH-VIGTCSSDEKAEFLKSLGCDRPINYKT--EDLGEVLKKE-- 203 (329)
T ss_pred HHHHhcCCCCCCEEEEEeCccHHHHHHHH-HHHHcCCe-EEEEeCcHHHHHHHHHcCCceEEeCCC--ccHHHHHHHh--
Confidence 984 578999999999986 999999999 99999995 677778888889889999877765432 4555555443
Q ss_pred HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc----------cccchHhhhcCcEEEeeccc------CC
Q 017868 251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM----------TVPLTPAAVREVDVVGVFRY------KN 314 (365)
Q Consensus 251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~----------~~~~~~~~~~~~~i~~~~~~------~~ 314 (365)
.+.++|++||++|. ..+...+++++++|+++.+|...... .........++.++.++... .+
T Consensus 204 -~~~~vd~v~~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (329)
T cd08250 204 -YPKGVDVVYESVGG-EMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQ 281 (329)
T ss_pred -cCCCCeEEEECCcH-HHHHHHHHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHH
Confidence 25689999999996 57889999999999999997543210 01112345567777776432 34
Q ss_pred cHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 315 TWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 315 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
.+.+++++++++.+.......+.+++ +++++|++.+.++...+|++++
T Consensus 282 ~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 282 HLDRLLQLYQRGKLVCEVDPTRFRGL--ESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHHHHHHHHHCCCeeeeECCccccCH--HHHHHHHHHHHcCCCCceEEeC
Confidence 57788999999988543334455677 9999999999998888999874
No 97
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=8.6e-34 Score=259.94 Aligned_cols=313 Identities=26% Similarity=0.324 Sum_probs=240.4
Q ss_pred ceeEEEecC--CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868 18 NMAAWLLGV--NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (365)
Q Consensus 18 ~~~~~~~~~--~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (365)
|+++++..+ ..+++++.+.|.++++||+|||.++++|+.|+....+.. ....|.++|+|++|+|+.+|++++.|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~ 76 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF----IPSYPAILGCDFAGTVVEVGSGVTRF 76 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc----ccCCCceeeeeeeEEEEEeCCCcCcC
Confidence 578888877 789999999999999999999999999999988764432 12346789999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH
Q 017868 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (365)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~ 174 (365)
++||+|+++....|+ ....+|+|++|+.++.+.++++|+++++++++.++ ++.+||+++
T Consensus 77 ~~Gd~V~~~~~~~~~--------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l 136 (339)
T cd08249 77 KVGDRVAGFVHGGNP--------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALAL 136 (339)
T ss_pred CCCCEEEEEeccccC--------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHH
Confidence 999999987432211 01246999999999999999999999999998887 888999987
Q ss_pred H-hcCC----------CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHH
Q 017868 175 R-RANI----------GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA 242 (365)
Q Consensus 175 ~-~~~~----------~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 242 (365)
. ..++ ++++++||+|+ |.+|+++++ +++..|++ ++++. ++++.+.++++|++.+++.. ..++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~-~a~~~G~~-v~~~~-~~~~~~~~~~~g~~~v~~~~--~~~~~ 211 (339)
T cd08249 137 FQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQ-LAKLAGYK-VITTA-SPKNFDLVKSLGADAVFDYH--DPDVV 211 (339)
T ss_pred hccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHH-HHHHcCCe-EEEEE-CcccHHHHHhcCCCEEEECC--CchHH
Confidence 4 4433 78999999997 899999999 99999995 55555 45888888999998887753 35666
Q ss_pred HHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhccc--CCEEEEEccCCCCccccchHhhhcCcEEEeecc---c-----
Q 017868 243 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCA--GGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR---Y----- 312 (365)
Q Consensus 243 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~--~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~---~----- 312 (365)
+.+++. .++++|++||++|.+..+..+++++++ +|+++.++........ ................ .
T Consensus 212 ~~l~~~---~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (339)
T cd08249 212 EDIRAA---TGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEP-RKGVKVKFVLGYTVFGEIPEDREFG 287 (339)
T ss_pred HHHHHh---cCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccC-CCCceEEEEEeeeecccccccccch
Confidence 666554 357899999999975688999999999 9999999754332101 1111111111111111 1
Q ss_pred CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCC-CceEEEEeC
Q 017868 313 KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG-TAIKVMFNL 365 (365)
Q Consensus 313 ~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vi~~ 365 (365)
...+.+++++++++.+.+. ....+++.++++.+|++.+..++ ..+|+|+++
T Consensus 288 ~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 288 EVFWKYLPELLEEGKLKPH--PVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHHHHHHHHHcCCccCC--CceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 2457789999999988543 44455622399999999999998 899999874
No 98
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=3.3e-33 Score=254.59 Aligned_cols=296 Identities=26% Similarity=0.368 Sum_probs=239.1
Q ss_pred ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCCc
Q 017868 28 TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI 107 (365)
Q Consensus 28 ~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 107 (365)
.+++.+.+.|.+.+++|+|||.++++|+.|...+.|.... ...+|.++|+|++|+|+.+|++++++++||+|++.+
T Consensus 13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~-- 88 (323)
T cd05282 13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS--RPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG-- 88 (323)
T ss_pred eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC--CCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC--
Confidence 6778888999999999999999999999999887664322 124577899999999999999999999999998852
Q ss_pred CCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEE
Q 017868 108 SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNV 185 (365)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~v 185 (365)
..|+|++|+.++...++++|+++++.+++.++ ...+|++++ +.+.+.+|++|
T Consensus 89 --------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~v 142 (323)
T cd05282 89 --------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWV 142 (323)
T ss_pred --------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEE
Confidence 14899999999999999999999998888765 677888887 45678999999
Q ss_pred EEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCC
Q 017868 186 LIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 264 (365)
Q Consensus 186 lI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g 264 (365)
||+|+ |.+|+++++ +++.+|++ ++++.+++++.+.++++|++.++++.. .++...+.+.+ .+.++|+++|++|
T Consensus 143 lI~g~~~~vg~~~~~-~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~~~~~d~vl~~~g 216 (323)
T cd05282 143 IQNAANSAVGRMLIQ-LAKLLGFK-TINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKEAT--GGAGARLALDAVG 216 (323)
T ss_pred EEcccccHHHHHHHH-HHHHCCCe-EEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHHHh--cCCCceEEEECCC
Confidence 99987 899999999 99999995 666777888888889999988776533 35555555443 3678999999999
Q ss_pred CHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcCcEEEeeccc-----------CCcHHHHHHHHHcCCCCCCC
Q 017868 265 LNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY-----------KNTWPLCLELLRSGKIDVKP 332 (365)
Q Consensus 265 ~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~~l~~g~~~~~~ 332 (365)
+. .....+++++++|+++.+|..... ..++...+..++.++.+.... .+.+.+++++++++.+. +
T Consensus 217 ~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~ 293 (323)
T cd05282 217 GE-SATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLT--T 293 (323)
T ss_pred CH-HHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcc--c
Confidence 86 567889999999999998764332 233333344478887776432 13578899999999884 4
Q ss_pred ceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 333 LVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 333 ~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
...+.|++ +++.+|++.+.++...+|+|++
T Consensus 294 ~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 294 PVGAKFPL--EDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred CccceecH--HHHHHHHHHHhcCCCCceEeeC
Confidence 46778888 9999999999998888999874
No 99
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=4.5e-33 Score=253.92 Aligned_cols=308 Identities=20% Similarity=0.266 Sum_probs=235.3
Q ss_pred ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868 18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (365)
Q Consensus 18 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (365)
|+++++.+++ ++++.+.|.|.+.++||+|||.++++|+.|+..+.|.... ...+|.++|||++|+|+.+ +++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~--~~~~ 76 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGV--TRNYPHTPGIDAAGTVVSS--DDPR 76 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCC--CCCCCCccCcccEEEEEEe--CCCC
Confidence 5788888765 7999999999999999999999999999999988775321 1345778999999999999 4678
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (365)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~ 173 (365)
|++||+|++.... .+. ..+|+|++|+.+++++++++|+++++++++.++ .+.+|+++
T Consensus 77 ~~~Gd~V~~~~~~---------------------~g~-~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~ 134 (325)
T cd05280 77 FREGDEVLVTGYD---------------------LGM-NTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALS 134 (325)
T ss_pred CCCCCEEEEcccc---------------------cCC-CCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHH
Confidence 9999999875210 011 135899999999999999999999999988876 66778887
Q ss_pred HHh---cCCC-CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHH
Q 017868 174 CRR---ANIG-PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 248 (365)
Q Consensus 174 ~~~---~~~~-~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~ 248 (365)
++. .++. .+++|||+|+ |.+|+++++ +++..|++ ++++++++++.+.++++|++.+++... ....+.+.
T Consensus 135 l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~-~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~ 208 (325)
T cd05280 135 VHRLEDNGQTPEDGPVLVTGATGGVGSIAVA-ILAKLGYT-VVALTGKEEQADYLKSLGASEVLDRED----LLDESKKP 208 (325)
T ss_pred HHHHhhccCCCCCCEEEEECCccHHHHHHHH-HHHHcCCE-EEEEeCCHHHHHHHHhcCCcEEEcchh----HHHHHHHH
Confidence 743 3345 3579999997 999999999 99999995 787888899999999999988765321 11122222
Q ss_pred HHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc--C-----CcHHHHH
Q 017868 249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY--K-----NTWPLCL 320 (365)
Q Consensus 249 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~--~-----~~~~~~~ 320 (365)
..++++|++||++|.. .+...+++++++|+++.+|.... +..+....+..++.++.+.... . +.++.+.
T Consensus 209 --~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (325)
T cd05280 209 --LLKARWAGAIDTVGGD-VLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLA 285 (325)
T ss_pred --hcCCCccEEEECCchH-HHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHH
Confidence 2246799999999974 88999999999999999985432 2233333444678887775432 1 2234455
Q ss_pred HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 321 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 321 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+++..+.. +.+.++|++ +++++|++.+.++...||+|+++
T Consensus 286 ~~~~~~~~---~~~~~~~~~--~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 286 TEWKPDLL---EIVVREISL--EELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred HHHhcCCc---cceeeEecH--HHHHHHHHHHhcCCcceEEEEeC
Confidence 55555522 346778888 99999999999999999999874
No 100
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=1e-32 Score=251.70 Aligned_cols=310 Identities=18% Similarity=0.241 Sum_probs=232.0
Q ss_pred ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868 18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (365)
Q Consensus 18 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (365)
|||+++.+.+ .++++++|.|.+.++||+||+.++++|+.|.....+. +.....+|.++|||++|+|+++| +++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~--~~~~~~~~~~~g~e~~G~V~~~~--~~~ 76 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPG--GKIVKRYPFIPGIDLAGTVVESN--DPR 76 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCC--ccccCCCCcCcccceeEEEEEcC--CCC
Confidence 5778887553 5888999999999999999999999999998765421 11123457899999999999854 577
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (365)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~ 173 (365)
|++||+|++.+.. .+ ....|+|+||+.++++.++++|+++++++++.++ .+.+|+++
T Consensus 77 ~~~Gd~V~~~~~~---------------------~~-~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~ 134 (326)
T cd08289 77 FKPGDEVIVTSYD---------------------LG-VSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALS 134 (326)
T ss_pred CCCCCEEEEcccc---------------------cC-CCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHH
Confidence 9999999876320 01 1246999999999999999999999999998876 56678777
Q ss_pred HH---hcCCC-CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHH
Q 017868 174 CR---RANIG-PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 248 (365)
Q Consensus 174 ~~---~~~~~-~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~ 248 (365)
++ ...+. .+++|||+|+ |.+|+++++ +++..|+ .++++++++++.++++++|++.+++..+ . ..+.++..
T Consensus 135 l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~-~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~-~~~~~~~~ 209 (326)
T cd08289 135 IHRLEENGLTPEQGPVLVTGATGGVGSLAVS-ILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREE--L-QEESIKPL 209 (326)
T ss_pred HHHHHhcCCCCCCCEEEEEcCCchHHHHHHH-HHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchh--H-HHHHHHhh
Confidence 63 23333 4789999987 999999999 9999999 5777888899999999999987766432 1 23334333
Q ss_pred HHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc---CCcHHHHHHHHH
Q 017868 249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY---KNTWPLCLELLR 324 (365)
Q Consensus 249 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~ 324 (365)
.+.++|++||++|. ......+++++++|+++.+|.... ........++.++.++.+.... .....++++.+.
T Consensus 210 ---~~~~~d~vld~~g~-~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (326)
T cd08289 210 ---EKQRWAGAVDPVGG-KTLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLA 285 (326)
T ss_pred ---ccCCcCEEEECCcH-HHHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHH
Confidence 25689999999997 478899999999999999986432 2222344455788888886422 122333444333
Q ss_pred cCCCC---CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 325 SGKID---VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 325 ~g~~~---~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
. .+. ..+.+.++|++ +++.+|++.+.+++..||+|+++
T Consensus 286 ~-~~~~~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 286 T-DLKPTQLLNEIKQEITL--DELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred h-hcCccccccccceEeeH--HHHHHHHHHHhcCcccceEEEeC
Confidence 2 221 12345788888 99999999999999999999875
No 101
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=2.4e-32 Score=248.92 Aligned_cols=306 Identities=20% Similarity=0.279 Sum_probs=232.5
Q ss_pred eeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868 19 MAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (365)
Q Consensus 19 ~~~~~~~---~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (365)
||+++.. +..++++++|.|.+.++||+|||.++++|+.|+....|.... ....|.++|||++|+|+. +++..|
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~--~~~~~~ 76 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGV--VRSYPMIPGIDAAGTVVS--SEDPRF 76 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCC--CCCCCccceeeeEEEEEe--cCCCCC
Confidence 4555553 347889999999999999999999999999999888765321 124578899999999988 567789
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH
Q 017868 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (365)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~ 174 (365)
++||+|++..... + ....|++++|+.++++.++++|+++++++++.++ .+.+|+.++
T Consensus 77 ~~Gd~V~~~~~~~---------------------~-~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~ 134 (323)
T TIGR02823 77 REGDEVIVTGYGL---------------------G-VSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSV 134 (323)
T ss_pred CCCCEEEEccCCC---------------------C-CCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHH
Confidence 9999998763100 0 1235899999999999999999999999988876 566777665
Q ss_pred ---HhcCCCCCC-EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHH
Q 017868 175 ---RRANIGPET-NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ 249 (365)
Q Consensus 175 ---~~~~~~~g~-~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~ 249 (365)
....+.+|+ +|||+|+ |.+|+++++ +|+.+|++ ++++..++++.+.++++|++.+++.++ .+ ..++..
T Consensus 135 ~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~-la~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~--~~~~~~- 207 (323)
T TIGR02823 135 MALERNGLTPEDGPVLVTGATGGVGSLAVA-ILSKLGYE-VVASTGKAEEEDYLKELGASEVIDRED--LS--PPGKPL- 207 (323)
T ss_pred HHhhhcCCCCCCceEEEEcCCcHHHHHHHH-HHHHcCCe-EEEEeCCHHHHHHHHhcCCcEEEcccc--HH--HHHHHh-
Confidence 334588998 9999997 999999999 99999996 555556777778889999987766322 11 223332
Q ss_pred HHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc-------CCcHHHHHH
Q 017868 250 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLE 321 (365)
Q Consensus 250 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~ 321 (365)
.+.++|+++|++|.. .+...+++++++|+++.+|.... ........+..++.++.+.... .+.+.++.+
T Consensus 208 --~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (323)
T TIGR02823 208 --EKERWAGAVDTVGGH-TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLAT 284 (323)
T ss_pred --cCCCceEEEECccHH-HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHH
Confidence 234699999999965 77899999999999999986432 2222223445778888875432 123556667
Q ss_pred HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 322 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 322 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
++..+.+. +. .+.|++ +++++|++.+.+++..+|+|+++
T Consensus 285 ~~~~~~~~--~~-~~~~~l--~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 285 DLKPRNLE--SI-TREITL--EELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred HhhcCCCc--Cc-eeeecH--HHHHHHHHHHhCCCccceEEEeC
Confidence 77777763 33 457777 99999999999999999999874
No 102
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.8e-32 Score=248.03 Aligned_cols=305 Identities=24% Similarity=0.325 Sum_probs=238.1
Q ss_pred ceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868 18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (365)
Q Consensus 18 ~~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (365)
|+++++... ..+++.+.+.|.+.++||+|||.++++|+.|+....|... ....|.++|+|++|+|+++|. ..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~--~~ 75 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP---SVKFPRVLGIEAVGEVEEAPG--GT 75 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC---CCCCCccccceeEEEEEEecC--CC
Confidence 466677644 3677778888889999999999999999999988776432 134578899999999999995 57
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (365)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~ 173 (365)
+++||+|+++.... ....+|+|++|+.+++.+++++|+++++++++.++ ++.+||++
T Consensus 76 ~~~Gd~V~~~~~~~----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~ 133 (320)
T cd08243 76 FTPGQRVATAMGGM----------------------GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGS 133 (320)
T ss_pred CCCCCEEEEecCCC----------------------CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHH
Confidence 99999998863210 01245899999999999999999999999888775 88899999
Q ss_pred HH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868 174 CR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 174 ~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
+. ..++++|++|||+|+ |.+|+++++ +++..|++ ++++..++++.+.++++|++.++.. ..++.+.+++.
T Consensus 134 l~~~~~~~~g~~vlV~ga~g~~g~~~~~-~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~i~~~--- 205 (320)
T cd08243 134 LFRSLGLQPGDTLLIRGGTSSVGLAALK-LAKALGAT-VTATTRSPERAALLKELGADEVVID---DGAIAEQLRAA--- 205 (320)
T ss_pred HHHhcCCCCCCEEEEEcCCChHHHHHHH-HHHHcCCE-EEEEeCCHHHHHHHHhcCCcEEEec---CccHHHHHHHh---
Confidence 85 467899999999987 999999999 99999995 7777788899999999999876542 23555555544
Q ss_pred hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCcc---ccchHh--hhcCcEEEeeccc---CCcHHHHHHHH
Q 017868 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT---VPLTPA--AVREVDVVGVFRY---KNTWPLCLELL 323 (365)
Q Consensus 252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~---~~~~~~--~~~~~~i~~~~~~---~~~~~~~~~~l 323 (365)
++++|+++|++|+ ......+++++++|+++.+|....... ...... ..+++.+.+.... ...++++++++
T Consensus 206 -~~~~d~vl~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (320)
T cd08243 206 -PGGFDKVLELVGT-ATLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFV 283 (320)
T ss_pred -CCCceEEEECCCh-HHHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHH
Confidence 5789999999997 478899999999999999985322111 111111 2456666665432 24578899999
Q ss_pred HcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868 324 RSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363 (365)
Q Consensus 324 ~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi 363 (365)
+++.+. +...+.|++ +++++|++.+.++...+|+|+
T Consensus 284 ~~~~~~--~~~~~~~~l--~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 284 AAGHLD--IPPSKVFTF--DEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred HCCcee--cccccEEcH--HHHHHHHHHHHhCCCCCcEEe
Confidence 999884 445677888 999999999998888889886
No 103
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=6.5e-32 Score=245.81 Aligned_cols=312 Identities=28% Similarity=0.424 Sum_probs=245.0
Q ss_pred ceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868 18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (365)
Q Consensus 18 ~~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (365)
|+++++... ..+++.++|.|.+.+++|+|++.++++|+.|+....|.... ....|.++|||++|+|+.+|+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~ 78 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG--LPPLPYVPGSDGAGVVEAVGEGVDG 78 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC--CCCCCeecccceEEEEEeeCCCCCC
Confidence 456666643 45888999999999999999999999999999887664321 2356889999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (365)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~ 173 (365)
|++||+|++.... + ....|++++|+.++++.++++|+++++++++.++ ++.+|+++
T Consensus 79 ~~~Gd~v~~~~~~--------------------~---~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~ 135 (325)
T cd08253 79 LKVGDRVWLTNLG--------------------W---GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRA 135 (325)
T ss_pred CCCCCEEEEeccc--------------------c---CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHH
Confidence 9999999886320 0 0135899999999999999999999999988776 88889998
Q ss_pred HH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868 174 CR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 174 ~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
+. ..++.+|++++|+|+ +++|+++++ +++..|+ .++++++++++.+.++++|++.+++.. ..++...+++...
T Consensus 136 l~~~~~~~~g~~vlI~g~~~~~g~~~~~-~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~- 210 (325)
T cd08253 136 LFHRAGAKAGETVLVHGGSGAVGHAAVQ-LARWAGA-RVIATASSAEGAELVRQAGADAVFNYR--AEDLADRILAATA- 210 (325)
T ss_pred HHHHhCCCCCCEEEEEcCCchHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCC--CcCHHHHHHHHcC-
Confidence 85 488999999999986 999999999 8899998 577777888889988899998776643 3456555555432
Q ss_pred hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc-------CCcHHHHHHHHH
Q 017868 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY-------KNTWPLCLELLR 324 (365)
Q Consensus 252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~l~ 324 (365)
+.++|++++++|.. .....+++++.+|+++.++............+..++.++.+...+ .+.++++.+++.
T Consensus 211 -~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (325)
T cd08253 211 -GQGVDVIIEVLANV-NLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLA 288 (325)
T ss_pred -CCceEEEEECCchH-HHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHH
Confidence 56899999999975 677888999999999999764322233333334566666654322 234666778888
Q ss_pred cCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 325 SGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 325 ~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
++.+ .+...+.|++ +++.++++.+.++...+|+++++
T Consensus 289 ~~~i--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 289 DGAL--RPVIAREYPL--EEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred CCCc--cCccccEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence 8887 4446677888 99999999999999999999874
No 104
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=6.6e-32 Score=247.38 Aligned_cols=307 Identities=22% Similarity=0.276 Sum_probs=238.9
Q ss_pred ceeEEEecCCc------eEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCC
Q 017868 18 NMAAWLLGVNT------LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE 91 (365)
Q Consensus 18 ~~~~~~~~~~~------l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 91 (365)
|++.++.++++ +...+++.|++.+++|+|++.++++|+.|+....+... ....|.++|+|++|+|+.+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~~G~~ 77 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP---VPGQPKILGWDASGVVEAVGSE 77 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC---CCCCCcccccceEEEEEEcCCC
Confidence 46778786643 56667888888999999999999999999988765321 1345678999999999999999
Q ss_pred CCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHH
Q 017868 92 VKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVG 170 (365)
Q Consensus 92 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a 170 (365)
++.|++||+|+.... ....|+|++|+.++.++++++|+++++++++.++ ...+|
T Consensus 78 v~~~~~Gd~V~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta 132 (336)
T cd08252 78 VTLFKVGDEVYYAGD-------------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTA 132 (336)
T ss_pred CCCCCCCCEEEEcCC-------------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHH
Confidence 999999999987421 0135899999999999999999999999888776 66788
Q ss_pred HHHH-HhcCCCC-----CCEEEEEcC-CHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHH
Q 017868 171 LHAC-RRANIGP-----ETNVLIMGA-GPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIA 242 (365)
Q Consensus 171 ~~~~-~~~~~~~-----g~~vlI~G~-g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 242 (365)
|+++ +.+.+.+ |++|+|+|+ |++|+++++ +++.+| + .++++++++++.++++++|++.+++.. .++.
T Consensus 133 ~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~-~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~ 207 (336)
T cd08252 133 WEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQ-LAKQLTGL-TVIATASRPESIAWVKELGADHVINHH---QDLA 207 (336)
T ss_pred HHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHH-HHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCC---ccHH
Confidence 8886 5577777 999999986 999999999 999999 6 678888888999999999998877643 2455
Q ss_pred HHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc----------
Q 017868 243 EEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY---------- 312 (365)
Q Consensus 243 ~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~---------- 312 (365)
+.++.. .++++|+++|++|....+..++++++.+|+++.+|... ...+...+..++.++.+....
T Consensus 208 ~~i~~~---~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (336)
T cd08252 208 EQLEAL---GIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFMFTRSMFQTPDM 282 (336)
T ss_pred HHHHhh---CCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEEEEEeeccccccccch
Confidence 555432 24689999999997668889999999999999997542 233333344566666653321
Q ss_pred ---CCcHHHHHHHHHcCCCCCCC-ceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 313 ---KNTWPLCLELLRSGKIDVKP-LVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 313 ---~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
.+.+.++++++.++.+.... ...+.+++ +++.+|++.+.++...+|++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 283 IEQHEILNEVADLLDAGKLKTTLTETLGPINA--ENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred hhHHHHHHHHHHHHHCCCEecceeeeecCCCH--HHHHHHHHHHHcCCccceEEeC
Confidence 13477899999999884221 11233556 9999999999999899999874
No 105
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=2.8e-32 Score=251.23 Aligned_cols=307 Identities=24% Similarity=0.303 Sum_probs=231.7
Q ss_pred ceeEEEecCCc----eEEEEecCCCC-CCCcEEEEEeeeeeCcccHhhhhccccC------------CccCCCCcccCcc
Q 017868 18 NMAAWLLGVNT----LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCA------------DFVVKEPMVIGHE 80 (365)
Q Consensus 18 ~~~~~~~~~~~----l~~~~~~~p~~-~~~eVlI~v~~~~l~~~D~~~~~g~~~~------------~~~~~~p~~~G~e 80 (365)
|+++++.+..+ +++.+.+.|.| .++||+|||.++++|+.|.....|...+ .....+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 56777665432 88999999999 5999999999999999999988763110 0124568899999
Q ss_pred ceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcch
Q 017868 81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEE 160 (365)
Q Consensus 81 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~ 160 (365)
++|+|+.+|+++++|++||+|++.... ...|+|++|+.+++++++++|++++++.
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~-------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~ 135 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP-------------------------WSQGTHAEYVVVPENEVSKKPKNLSHEE 135 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC-------------------------CCCccceeEEEecHHHeecCCCCCCHHH
Confidence 999999999999999999999885321 1358999999999999999999999998
Q ss_pred hccch-hhHHHHHHHH-hcCCC----CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEe
Q 017868 161 GAMCE-PLSVGLHACR-RANIG----PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVK 233 (365)
Q Consensus 161 a~~~~-~~~~a~~~~~-~~~~~----~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~ 233 (365)
++.++ ...+||+++. .+.+. +|++|+|+|+ |++|+++++ +++.+|++ ++++.++ ++.+.++++|++.+++
T Consensus 136 aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~-~a~~~G~~-v~~~~~~-~~~~~~~~~g~~~~~~ 212 (350)
T cd08248 136 AASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQ-LLKAWGAH-VTTTCST-DAIPLVKSLGADDVID 212 (350)
T ss_pred HhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHH-HHHHCCCe-EEEEeCc-chHHHHHHhCCceEEE
Confidence 88776 7888999874 45554 4999999986 999999999 99999995 5555544 6778889999887766
Q ss_pred CCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc----cc----cchHhhhcCcE
Q 017868 234 VSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM----TV----PLTPAAVREVD 305 (365)
Q Consensus 234 ~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~----~~----~~~~~~~~~~~ 305 (365)
.. ..++.+.+. . .+++|++||++|.. ....++++++++|+++.++...... .. ......+....
T Consensus 213 ~~--~~~~~~~l~---~--~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (350)
T cd08248 213 YN--NEDFEEELT---E--RGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKN 284 (350)
T ss_pred CC--ChhHHHHHH---h--cCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHH
Confidence 43 234444332 2 46899999999976 7889999999999999987432110 00 01111111111
Q ss_pred ---------EEe-e-cccCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 306 ---------VVG-V-FRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 306 ---------i~~-~-~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
+.. . ......+.+++++++++.+ .+.+++.|++ +++.+|++.+.++...+|++++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 285 VKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKI--KPVIDKVFPF--EEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCE--ecccceeecH--HHHHHHHHHHhcCCCceEEEeC
Confidence 111 1 1124568899999999988 4456788888 9999999999988888898874
No 106
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=2e-31 Score=242.32 Aligned_cols=305 Identities=25% Similarity=0.362 Sum_probs=242.4
Q ss_pred ceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868 18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (365)
Q Consensus 18 ~~~~~~~~---~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (365)
||++++.+ +..+++.+.+.|.+.++||+|||.++++|+.|+....|... ....+|.++|+|++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~vg~~~~~ 78 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYP--PPPGASDILGLEVAGVVVAVGPGVTG 78 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCC--CCCCCCCcccceeEEEEEeeCCCCCC
Confidence 57788775 45688888888888999999999999999999988765432 12345789999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (365)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~ 173 (365)
+++||+|+++. .+|+|++|+.+++++++++|+++++.+++.+. ++.+++++
T Consensus 79 ~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~ 130 (323)
T cd05276 79 WKVGDRVCALL----------------------------AGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQN 130 (323)
T ss_pred CCCCCEEEEec----------------------------CCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHH
Confidence 99999998751 24899999999999999999999998888775 78889998
Q ss_pred HH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868 174 CR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 174 ~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
+. ...+.++++++|+|+ +++|+++++ +++..|++ ++.+++++++.+.++++|++.+++.. ..++.+.+.+...
T Consensus 131 ~~~~~~~~~~~~vlv~g~~~~ig~~~~~-~~~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~- 205 (323)
T cd05276 131 LFQLGGLKAGETVLIHGGASGVGTAAIQ-LAKALGAR-VIATAGSEEKLEACRALGADVAINYR--TEDFAEEVKEATG- 205 (323)
T ss_pred HHHhcCCCCCCEEEEEcCcChHHHHHHH-HHHHcCCE-EEEEcCCHHHHHHHHHcCCCEEEeCC--chhHHHHHHHHhC-
Confidence 74 578899999999987 999999999 88999995 77777888888888889987766543 2455555554432
Q ss_pred hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeecccC-----------CcHHHH
Q 017868 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRYK-----------NTWPLC 319 (365)
Q Consensus 252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~ 319 (365)
+.++|++++++|.. .....++++.++|+++.++.... ........++.+++++.++.... +.+.++
T Consensus 206 -~~~~d~vi~~~g~~-~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (323)
T cd05276 206 -GRGVDVILDMVGGD-YLARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHV 283 (323)
T ss_pred -CCCeEEEEECCchH-HHHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHH
Confidence 56899999999975 57788999999999999875432 22233333446788888765321 235678
Q ss_pred HHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868 320 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363 (365)
Q Consensus 320 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi 363 (365)
++++.++.+ .+..++.|++ +++++|++.+.++...+|+++
T Consensus 284 ~~~~~~~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 284 WPLFASGRI--RPVIDKVFPL--EEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHHHCCCc--cCCcceEEcH--HHHHHHHHHHHhCCCcceEeC
Confidence 888988888 4456788888 999999999998888888874
No 107
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.1e-31 Score=242.69 Aligned_cols=307 Identities=27% Similarity=0.361 Sum_probs=240.4
Q ss_pred ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868 18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (365)
Q Consensus 18 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (365)
|+++++.+.+ .+++.+.+.|.+.+++|+|+|.++++|+.|+....+... .....|.++|+|++|+|+.+|+++.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~~G~~~~~ 78 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAA--ARPPLPAILGCDVAGVVEAVGEGVTR 78 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC--CCCCCCcccccceeEEEEEeCCCCCC
Confidence 5788887653 488888888889999999999999999999988766432 11334778999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (365)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~ 173 (365)
|++||+|+++... + ....|+|++|+.+++++++++|+++++..++.++ ...+|+++
T Consensus 79 ~~~Gd~V~~~~~~--------------------~---~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~ 135 (326)
T cd08272 79 FRVGDEVYGCAGG--------------------L---GGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEG 135 (326)
T ss_pred CCCCCEEEEccCC--------------------c---CCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHH
Confidence 9999999875210 0 0135889999999999999999999998888776 77788888
Q ss_pred H-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868 174 C-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 174 ~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
+ +.+++++|++++|+|+ +.+|+++++ +++..|++ ++.++++ ++.++++++|++.+++.. .. +.+.+++..
T Consensus 136 l~~~~~~~~~~~vli~g~~~~~g~~~~~-~a~~~g~~-v~~~~~~-~~~~~~~~~g~~~~~~~~--~~-~~~~~~~~~-- 207 (326)
T cd08272 136 LVDRAAVQAGQTVLIHGGAGGVGHVAVQ-LAKAAGAR-VYATASS-EKAAFARSLGADPIIYYR--ET-VVEYVAEHT-- 207 (326)
T ss_pred HHHhcCCCCCCEEEEEcCCCcHHHHHHH-HHHHcCCE-EEEEech-HHHHHHHHcCCCEEEecc--hh-HHHHHHHhc--
Confidence 6 6788999999999985 999999999 99999995 6666666 888888889987766532 23 555565543
Q ss_pred hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc------------CCcHHHH
Q 017868 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY------------KNTWPLC 319 (365)
Q Consensus 252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~------------~~~~~~~ 319 (365)
.+.++|+++|++++. .....+++++++|+++.++... . ........+++.+.+.... .+.+.++
T Consensus 208 ~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (326)
T cd08272 208 GGRGFDVVFDTVGGE-TLDASFEAVALYGRVVSILGGA-T--HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREA 283 (326)
T ss_pred CCCCCcEEEECCChH-HHHHHHHHhccCCEEEEEecCC-c--cchhhHhhhcceEEEEEcccccccccchhhHHHHHHHH
Confidence 256899999999975 6788999999999999987543 1 1222233566666654421 2357788
Q ss_pred HHHHHcCCCCCCCceE-EEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 320 LELLRSGKIDVKPLVT-HRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 320 ~~~l~~g~~~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+++++++.+. +.+. +.|++ +++.++++.+.++...+|+++++
T Consensus 284 ~~~l~~~~l~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 284 ARLVERGQLR--PLLDPRTFPL--EEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred HHHHHCCCcc--cccccceecH--HHHHHHHHHHHcCCcccEEEEEC
Confidence 8999998883 4433 77788 99999999998888889999875
No 108
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=2.4e-31 Score=242.44 Aligned_cols=307 Identities=20% Similarity=0.247 Sum_probs=234.8
Q ss_pred ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868 18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (365)
Q Consensus 18 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (365)
|+++++.+++ .+++++.|.|+|+++||+|||.++++|+.|.....|.... ...+|.++|+|++|+|++ +++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~--~~~~~ 76 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGI--VRTFPLVPGIDLAGTVVE--SSSPR 76 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccc--cCCCCCccccceEEEEEe--CCCCC
Confidence 5788887654 7999999999999999999999999999999887664211 123477899999999998 77788
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (365)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~ 173 (365)
+++||+|+++...- + ...+|+|++|++++.+.++++|+++++++++.++ .+.+|+.+
T Consensus 77 ~~~Gd~V~~~~~~~--------------~--------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~ 134 (324)
T cd08288 77 FKPGDRVVLTGWGV--------------G--------ERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLC 134 (324)
T ss_pred CCCCCEEEECCccC--------------C--------CCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHH
Confidence 99999998852100 0 0135899999999999999999999999888776 56667655
Q ss_pred HH---hcCCC-CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHH
Q 017868 174 CR---RANIG-PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKI 248 (365)
Q Consensus 174 ~~---~~~~~-~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~ 248 (365)
+. ..... ++++|||+|+ |.+|++++| +++.+|++ ++++++++++.++++++|++.++++.+ +...++.+
T Consensus 135 ~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~-~A~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~ 208 (324)
T cd08288 135 VMALEDHGVTPGDGPVLVTGAAGGVGSVAVA-LLARLGYE-VVASTGRPEEADYLRSLGASEIIDRAE----LSEPGRPL 208 (324)
T ss_pred HHHHhhcCcCCCCCEEEEECCCcHHHHHHHH-HHHHCCCe-EEEEeCCHHHHHHHHhcCCCEEEEcch----hhHhhhhh
Confidence 43 44555 6789999997 999999999 99999995 777778889999999999988877532 22233333
Q ss_pred HHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeeccc-------CCcHHHHH
Q 017868 249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRY-------KNTWPLCL 320 (365)
Q Consensus 249 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~ 320 (365)
...++|.++|+++.. .....+..++.+|+++.+|.... ........+..++.++.+.... .+.+..+.
T Consensus 209 ---~~~~~~~~~d~~~~~-~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (324)
T cd08288 209 ---QKERWAGAVDTVGGH-TLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLA 284 (324)
T ss_pred ---ccCcccEEEECCcHH-HHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHH
Confidence 245689999999963 66788888998899999885421 1123333344678888875421 23466777
Q ss_pred HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 321 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 321 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+++.++.+ .+ +.+.+++ +++.+|++.+.+++..+|+++++
T Consensus 285 ~~~~~~~~--~~-i~~~~~~--~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 285 RDLDPALL--EA-LTREIPL--ADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred HHHhcCCc--cc-cceeecH--HHHHHHHHHHhcCCccCeEEEeC
Confidence 88888877 33 3577888 99999999999999999999874
No 109
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=2.5e-31 Score=245.10 Aligned_cols=315 Identities=19% Similarity=0.260 Sum_probs=228.4
Q ss_pred eeEEEecC-CceEEEEecCCCC---CCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC-
Q 017868 19 MAAWLLGV-NTLKIQPFELPSL---GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK- 93 (365)
Q Consensus 19 ~~~~~~~~-~~l~~~~~~~p~~---~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~- 93 (365)
+++++.++ +.++++.++.|.| .+++|+|||.++++|+.|+....+.. .. ....|.++|+|++|+|+++|++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~-~~-~~~~~~~~g~e~~G~V~~vG~~v~~ 79 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYT-FH-FKVKEKGLGRDYSGVIVKVGSNVAS 79 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccc-cc-cccCCCccCceeEEEEEEeCccccc
Confidence 45666654 4566665555554 89999999999999999988765311 11 111377899999999999999998
Q ss_pred CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCC----ceEECCCCCCcchhccch-hhH
Q 017868 94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD----LCFKLPDNVSLEEGAMCE-PLS 168 (365)
Q Consensus 94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~----~~~~iP~~~~~~~a~~~~-~~~ 168 (365)
.|++||+|++.....| ...|+|++|+++++. .++++|+++++++++.++ .+.
T Consensus 80 ~~~~Gd~V~~~~~~~~-----------------------~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ 136 (352)
T cd08247 80 EWKVGDEVCGIYPHPY-----------------------GGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLG 136 (352)
T ss_pred CCCCCCEEEEeecCCC-----------------------CCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHH
Confidence 8999999988633211 135899999999987 789999999999998886 677
Q ss_pred HHHHHHHh-c-CCCCCCEEEEEcC-CHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcc-cHHH
Q 017868 169 VGLHACRR-A-NIGPETNVLIMGA-GPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ-DIAE 243 (365)
Q Consensus 169 ~a~~~~~~-~-~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~ 243 (365)
+||+++.. . ++++|++|||+|+ +.+|+++++ +++..| .++++++.+ +++.+.++++|++.+++..+... .+..
T Consensus 137 ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~-~a~~~~~~~~v~~~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~~~ 214 (352)
T cd08247 137 TAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQ-LAKNHYNIGTVVGTCS-SRSAELNKKLGADHFIDYDAHSGVKLLK 214 (352)
T ss_pred HHHHHHHHhhhccCCCCeEEEECCCchHHHHHHH-HHHhcCCcceEEEEeC-hhHHHHHHHhCCCEEEecCCCcccchHH
Confidence 89998855 4 6999999999987 799999999 888874 435677654 55556778999988777543211 0323
Q ss_pred HHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcc---cCCEEEEEc-cCCCCcc---------------ccchHhhhcCc
Q 017868 244 EVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATC---AGGKVCLVG-MGHHEMT---------------VPLTPAAVREV 304 (365)
Q Consensus 244 ~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~---~~G~~~~~g-~~~~~~~---------------~~~~~~~~~~~ 304 (365)
.+.+.. ..++++|++|||+|........+++++ ++|+++.++ ....+.. .......+...
T Consensus 215 ~~~~~~-~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (352)
T cd08247 215 PVLENV-KGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSY 293 (352)
T ss_pred HHHHhh-cCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCc
Confidence 332221 115789999999998667788999999 999999874 2111100 01112223444
Q ss_pred EEEeeccc--CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 305 DVVGVFRY--KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 305 ~i~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
++...... .+.+.++++++.++.+ .+...+.+++ +++++|++.++++...||+++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 294 NYQFFLLDPNADWIEKCAELIADGKV--KPPIDSVYPF--EDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred ceEEEEecCCHHHHHHHHHHHhCCCe--EeeeccEecH--HHHHHHHHHHHcCCCCCcEEEeC
Confidence 43332211 2467889999999988 4456678888 99999999999998899999874
No 110
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=2.2e-31 Score=243.15 Aligned_cols=292 Identities=20% Similarity=0.200 Sum_probs=226.3
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCC
Q 017868 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG 106 (365)
Q Consensus 27 ~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 106 (365)
+.+++.+.|.|++.++||+|||.++++|+.|.....+...-..+...+.++|+|++|+|+++|++ +|++||+|+.+
T Consensus 18 ~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~-- 93 (329)
T cd05288 18 DDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSGF-- 93 (329)
T ss_pred cceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEecc--
Confidence 57999999999999999999999999999876555442110111122457899999999999964 79999999764
Q ss_pred cCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecC-CceEECCCCCC--cchhcc-c-hhhHHHHHHHH-hcCCC
Q 017868 107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA-DLCFKLPDNVS--LEEGAM-C-EPLSVGLHACR-RANIG 180 (365)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~-~~~~~iP~~~~--~~~a~~-~-~~~~~a~~~~~-~~~~~ 180 (365)
++|++|+.+++ +.++++|++++ +.+++. + .++.+|++++. .+.+.
T Consensus 94 -----------------------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~ 144 (329)
T cd05288 94 -----------------------------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPK 144 (329)
T ss_pred -----------------------------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCC
Confidence 58999999999 99999999985 444433 4 47889999884 57789
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
++++|||+|+ |.+|+++++ +++..|+ .++++++++++.+.+++ +|++.++++.. .++...+.+.. ++++|+
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~-~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~v~~~~---~~~~d~ 217 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQ-IAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT--PDLAEALKEAA---PDGIDV 217 (329)
T ss_pred CCCEEEEecCcchHHHHHHH-HHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCC--hhHHHHHHHhc---cCCceE
Confidence 9999999985 999999999 9999999 57788888889998888 99988777543 45655555543 468999
Q ss_pred EEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCcc------ccchHhhhcCcEEEeeccc------CCcHHHHHHHHHcC
Q 017868 259 SFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT------VPLTPAAVREVDVVGVFRY------KNTWPLCLELLRSG 326 (365)
Q Consensus 259 vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~------~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~g 326 (365)
+||++|. ..+..++++++++|+++.+|....... .+......++.++.+.... .+.+.+++++++++
T Consensus 218 vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 296 (329)
T cd05288 218 YFDNVGG-EILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEG 296 (329)
T ss_pred EEEcchH-HHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCC
Confidence 9999996 478899999999999999975432211 1233355677887776533 24578889999999
Q ss_pred CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868 327 KIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363 (365)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi 363 (365)
.+... ....+++ +++.++++.+.+++..+|+++
T Consensus 297 ~i~~~--~~~~~~l--~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 297 KLKYR--EDVVEGL--ENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred Ccccc--ccccccH--HHHHHHHHHHhcCCCccceeC
Confidence 98543 3344667 999999999998888888874
No 111
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.6e-31 Score=241.22 Aligned_cols=308 Identities=26% Similarity=0.341 Sum_probs=239.5
Q ss_pred ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868 18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (365)
Q Consensus 18 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (365)
|+++++.+++ .+++.+.|.|++.+++|+|||.++++|+.|+....+.... ...|.++|||++|+|+.+|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~---~~~~~~~g~e~~G~v~~~G~~~~~ 77 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA---WSYPHVPGVDGAGVVVAVGAKVTG 77 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC---CCCCcccccceEEEEEEeCCCCCc
Confidence 6788888877 8999999999999999999999999999999887654311 123678999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (365)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~ 173 (365)
+++||+|++.... ...|+|++|+.++.+.++++|+++++.+++.+. .+.+|+++
T Consensus 78 ~~~Gd~V~~~~~~-------------------------~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~ 132 (325)
T cd08271 78 WKVGDRVAYHASL-------------------------ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQA 132 (325)
T ss_pred CCCCCEEEeccCC-------------------------CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHH
Confidence 9999999875210 135899999999999999999999998888765 78889998
Q ss_pred H-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868 174 C-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 174 ~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
+ +.+++++|++++|+|+ +.+|+++++ +++..|++ ++.+. ++++.+.+.++|++.+++. ...++...+++..
T Consensus 133 ~~~~~~~~~g~~vlI~g~~~~ig~~~~~-~a~~~g~~-v~~~~-~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~-- 205 (325)
T cd08271 133 LFKKLRIEAGRTILITGGAGGVGSFAVQ-LAKRAGLR-VITTC-SKRNFEYVKSLGADHVIDY--NDEDVCERIKEIT-- 205 (325)
T ss_pred HHHhcCCCCCCEEEEECCccHHHHHHHH-HHHHcCCE-EEEEE-cHHHHHHHHHcCCcEEecC--CCccHHHHHHHHc--
Confidence 8 4578899999999998 889999999 99999995 55554 6677788888998776653 3345555565543
Q ss_pred hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC--ccccchHhhhcCcEEEeeccc---------CCcHHHHH
Q 017868 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFRY---------KNTWPLCL 320 (365)
Q Consensus 252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~ 320 (365)
.+.++|++++++++. .....+++++++|+++.++..... .........++.+++...... .+.+.+++
T Consensus 206 ~~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (325)
T cd08271 206 GGRGVDAVLDTVGGE-TAAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELL 284 (325)
T ss_pred CCCCCcEEEECCCcH-hHHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHH
Confidence 256899999999976 556789999999999988643221 111112233444444443221 23457788
Q ss_pred HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 321 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 321 ~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
++++++.+. +...+.|++ +++.++++.+.++...+|+++++
T Consensus 285 ~~~~~~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 285 ELLAAGKLE--PLVIEVLPF--EQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred HHHHCCCee--eccceEEcH--HHHHHHHHHHHcCCccceEEEEC
Confidence 999999883 445677777 99999999999888899999874
No 112
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=2.5e-31 Score=235.79 Aligned_cols=266 Identities=36% Similarity=0.619 Sum_probs=216.6
Q ss_pred cEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCC
Q 017868 43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNL 122 (365)
Q Consensus 43 eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~ 122 (365)
||+|+|.++++|+.|+....|... ....+|.++|+|++|+|+++|++++.|++||+|++.+..+|++|++|+. .
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~ 74 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYP--PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----L 74 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCC--cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----h
Confidence 689999999999999998877542 1235578999999999999999999999999999999999999999997 6
Q ss_pred CCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHH
Q 017868 123 CPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRR-ANIGPETNVLIMGAGPIGLVTMLG 200 (365)
Q Consensus 123 ~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~~-~~~~~g~~vlI~G~g~~G~~ai~~ 200 (365)
|+...+.+. ...|+|++|+.++.+.++++|+++++++++.++ ++.+|+++++. ..++++++|||+|++++|+++++
T Consensus 75 ~~~~~~~~~-~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~- 152 (271)
T cd05188 75 CPGGGILGE-GLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQ- 152 (271)
T ss_pred CCCCCEecc-ccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-
Confidence 776655443 457999999999999999999999999999885 89999999865 55689999999998669999999
Q ss_pred HHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCC
Q 017868 201 APRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGG 280 (365)
Q Consensus 201 l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G 280 (365)
+++..|. +++++++++++.+.++++|++.+++.. ..++...+. ...+.++|+++++++........+++++++|
T Consensus 153 ~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~---~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G 226 (271)
T cd05188 153 LAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYK--EEDLEEELR---LTGGGGADVVIDAVGGPETLAQALRLLRPGG 226 (271)
T ss_pred HHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCC--cCCHHHHHH---HhcCCCCCEEEECCCCHHHHHHHHHhcccCC
Confidence 9999997 678888888999999999987766543 345545444 2336789999999998557888999999999
Q ss_pred EEEEEccCCCCccc-cchHhhhcCcEEEeeccc-CCcHHHHHHH
Q 017868 281 KVCLVGMGHHEMTV-PLTPAAVREVDVVGVFRY-KNTWPLCLEL 322 (365)
Q Consensus 281 ~~~~~g~~~~~~~~-~~~~~~~~~~~i~~~~~~-~~~~~~~~~~ 322 (365)
+++.++........ .....+.+++++.++..+ ..++++++++
T Consensus 227 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (271)
T cd05188 227 RIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDL 270 (271)
T ss_pred EEEEEccCCCCCCcccHHHHHhcceEEEEeecCCHHHHHHHHhh
Confidence 99999865432222 234467788999888765 4466666655
No 113
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=1.4e-30 Score=236.41 Aligned_cols=296 Identities=26% Similarity=0.333 Sum_probs=234.7
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCC
Q 017868 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG 106 (365)
Q Consensus 27 ~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 106 (365)
..+.+.+.+.|.+.++||+|+|.++++|+.|+....+... ..+|.++|+|++|+|+.+|++++++++||+|+++.
T Consensus 12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~----~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~- 86 (320)
T cd05286 12 EVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP----LPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG- 86 (320)
T ss_pred cceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC----CCCCccCCcceeEEEEEECCCCCCCCCCCEEEEec-
Confidence 3567778888788999999999999999999988765432 24467899999999999999999999999998751
Q ss_pred cCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCE
Q 017868 107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETN 184 (365)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~ 184 (365)
..|+|++|+.++.+.++++|+++++.+++.++ ...++++++ +.+++.+|++
T Consensus 87 ---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~ 139 (320)
T cd05286 87 ---------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDT 139 (320)
T ss_pred ---------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCE
Confidence 14889999999999999999999998888765 777888887 4588999999
Q ss_pred EEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCC
Q 017868 185 VLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 263 (365)
Q Consensus 185 vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~ 263 (365)
|||+|+ |++|+++++ +++.+|+ .+++++.++++.+.++++|++.+++.. ..++.+.++.+. .+.++|++++|+
T Consensus 140 vlI~g~~g~~g~~~~~-~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vl~~~ 213 (320)
T cd05286 140 VLVHAAAGGVGLLLTQ-WAKALGA-TVIGTVSSEEKAELARAAGADHVINYR--DEDFVERVREIT--GGRGVDVVYDGV 213 (320)
T ss_pred EEEEcCCchHHHHHHH-HHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC--chhHHHHHHHHc--CCCCeeEEEECC
Confidence 999996 999999999 9999999 477777888999999999998776532 345656665543 256899999999
Q ss_pred CCHHHHHHHHHhcccCCEEEEEccCCCCc-cccchHhhhcCcEEEeecc----c-----CCcHHHHHHHHHcCCCCCCCc
Q 017868 264 GLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFR----Y-----KNTWPLCLELLRSGKIDVKPL 333 (365)
Q Consensus 264 g~~~~~~~~~~~l~~~G~~~~~g~~~~~~-~~~~~~~~~~~~~i~~~~~----~-----~~~~~~~~~~l~~g~~~~~~~ 333 (365)
++. .....+++++++|+++.+|...... .+....+..+++++.+... . .+.+.+++++++++.+. +.
T Consensus 214 ~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~ 290 (320)
T cd05286 214 GKD-TFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLK--VE 290 (320)
T ss_pred CcH-hHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCc--Cc
Confidence 974 7889999999999999998543321 1222223356666654321 1 23456788999998884 33
Q ss_pred eEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 334 VTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 334 ~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
..+.|++ +++.+|++.+.++...+|++++.
T Consensus 291 ~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 291 IGKRYPL--ADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred ccceEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence 5677777 99999999999988889999863
No 114
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=9.2e-31 Score=239.31 Aligned_cols=299 Identities=23% Similarity=0.299 Sum_probs=231.1
Q ss_pred eeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCC
Q 017868 19 MAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95 (365)
Q Consensus 19 ~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~ 95 (365)
|++++... ..+++.+.+.|.|.++||+|++.++++|+.|+..+.|..... ..+|.++|+|++|+|+.+|+++++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~vG~~v~~~ 79 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ--PPLPFTPGYDLVGRVDALGSGVTGF 79 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC--CCCCcccccceEEEEEEeCCCCccC
Confidence 56666643 478999999999999999999999999999998887653221 2457899999999999999999999
Q ss_pred CCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH
Q 017868 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC 174 (365)
Q Consensus 96 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~ 174 (365)
++||+|+++. ..|+|++|+.++.+.++++|+++++++++.++ ++.+||+++
T Consensus 80 ~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l 131 (331)
T cd08273 80 EVGDRVAALT----------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQML 131 (331)
T ss_pred CCCCEEEEeC----------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHH
Confidence 9999998852 13889999999999999999999999887765 788899988
Q ss_pred H-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868 175 R-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 252 (365)
Q Consensus 175 ~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~ 252 (365)
. .+++.+|++++|+|+ |.+|+++++ +++..|++ ++.+.. +++.++++++|+.. ++. ...++... . ..
T Consensus 132 ~~~~~~~~g~~vlI~g~~g~ig~~~~~-~a~~~g~~-v~~~~~-~~~~~~~~~~g~~~-~~~--~~~~~~~~--~---~~ 200 (331)
T cd08273 132 HRAAKVLTGQRVLIHGASGGVGQALLE-LALLAGAE-VYGTAS-ERNHAALRELGATP-IDY--RTKDWLPA--M---LT 200 (331)
T ss_pred HHhcCCCCCCEEEEECCCcHHHHHHHH-HHHHcCCE-EEEEeC-HHHHHHHHHcCCeE-EcC--CCcchhhh--h---cc
Confidence 4 478999999999987 999999999 99999994 666666 88888889999653 332 22333322 1 12
Q ss_pred CCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccc--cc--------------hHhhhcCcEEEeeccc----
Q 017868 253 GTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTV--PL--------------TPAAVREVDVVGVFRY---- 312 (365)
Q Consensus 253 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~--~~--------------~~~~~~~~~i~~~~~~---- 312 (365)
++++|++++++|+. ....++++++.+|+++.+|........ .. .....+..........
T Consensus 201 ~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (331)
T cd08273 201 PGGVDVVFDGVGGE-SYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAED 279 (331)
T ss_pred CCCceEEEECCchH-HHHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccC
Confidence 46899999999976 488899999999999999854322111 10 0011122222222211
Q ss_pred ----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868 313 ----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363 (365)
Q Consensus 313 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi 363 (365)
.+.+.+++++++++.+ .+...+.+++ +++.++++.+.++...||+|+
T Consensus 280 p~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 280 PKLFRQDLTELLDLLAKGKI--RPKIAKRLPL--SEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHHHHHHHHHHHHHHCCCc--cCCcceEEcH--HHHHHHHHHHHcCCCcceEEe
Confidence 3567889999999988 4456677888 999999999998888899886
No 115
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=2.8e-31 Score=239.41 Aligned_cols=289 Identities=24% Similarity=0.393 Sum_probs=227.9
Q ss_pred CCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccc
Q 017868 36 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHC 115 (365)
Q Consensus 36 ~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~ 115 (365)
.|.+.+++|+||+.++++|+.|+..+.+.... ...+|.++|+|++|+|+.+|+++++|++||+|+++..
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~--------- 70 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT--MPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG--------- 70 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCC--CCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC---------
Confidence 57789999999999999999999988765322 1245789999999999999999999999999988621
Q ss_pred cCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHHhcCCCCCCEEEEEcC-CHH
Q 017868 116 KGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGA-GPI 193 (365)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~-g~~ 193 (365)
...|+|++|+.++++.++++|+++++++++.++ .+.+||++++...+++|++++|+|+ +.+
T Consensus 71 -----------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~ 133 (303)
T cd08251 71 -----------------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGT 133 (303)
T ss_pred -----------------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHH
Confidence 135899999999999999999999999888876 7888999988888999999999965 999
Q ss_pred HHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHH
Q 017868 194 GLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTAL 273 (365)
Q Consensus 194 G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~ 273 (365)
|+++++ +++.+|+ .++++++++++.+.++++|++.+++... .++...+..... +.++|+++|+++. ......+
T Consensus 134 g~~~~~-~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~~--~~~~d~v~~~~~~-~~~~~~~ 206 (303)
T cd08251 134 GLMAVQ-LARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLTG--GRGVDVVINTLSG-EAIQKGL 206 (303)
T ss_pred HHHHHH-HHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHcC--CCCceEEEECCcH-HHHHHHH
Confidence 999999 9999999 5777778888999999999988776433 466666665532 5789999999985 4778889
Q ss_pred HhcccCCEEEEEccCCCC--ccccchH----hhhcCcEEEeeccc-----CCcHHHHHHHHHcCCCCCCCceEEEecCCh
Q 017868 274 GATCAGGKVCLVGMGHHE--MTVPLTP----AAVREVDVVGVFRY-----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQ 342 (365)
Q Consensus 274 ~~l~~~G~~~~~g~~~~~--~~~~~~~----~~~~~~~i~~~~~~-----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~ 342 (365)
++++++|+++.++..... ....... ..++.+++...... .+.+.+++++++++.+ .+..++.|++
T Consensus 207 ~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~-- 282 (303)
T cd08251 207 NCLAPGGRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGEL--RPTVSRIFPF-- 282 (303)
T ss_pred HHhccCcEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCc--cCCCceEEcH--
Confidence 999999999998754321 1111111 11222222222111 2457788899999988 4456677888
Q ss_pred hhHHHHHHHHhcCCCceEEEE
Q 017868 343 KEVEEAFETSARGGTAIKVMF 363 (365)
Q Consensus 343 ~~~~~a~~~~~~~~~~gk~vi 363 (365)
+++.++++.+.++...+|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 283 DDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred HHHHHHHHHHHhCCCcceEeC
Confidence 999999999998888888874
No 116
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=6e-30 Score=232.93 Aligned_cols=307 Identities=23% Similarity=0.328 Sum_probs=240.4
Q ss_pred ceeEEEec---CCceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868 18 NMAAWLLG---VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (365)
Q Consensus 18 ~~~~~~~~---~~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (365)
|+++.+.. +..+++.+.+.|.+++++++|+|.++++|+.|+....+..... ..+|.++|||++|+|+.+|+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~vg~~~~~ 78 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPP--PGASDILGLEVAGEVVAVGEGVSR 78 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC--CCCCCCccceeEEEEEEeCCCCCC
Confidence 35566554 3457777877777899999999999999999988776533211 234678999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (365)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~ 173 (365)
+++||+|+++. .+|+|++|+.++.+.++++|+++++.+++.+. .+.+++++
T Consensus 79 ~~~Gd~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~ 130 (325)
T TIGR02824 79 WKVGDRVCALV----------------------------AGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSN 130 (325)
T ss_pred CCCCCEEEEcc----------------------------CCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHH
Confidence 99999998751 24889999999999999999999988887765 78889988
Q ss_pred H-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868 174 C-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 174 ~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
+ +...++++++++|+|+ |++|+++++ +++..|++ ++++.+++++.++++++|++.+++. ...++.+.++...
T Consensus 131 ~~~~~~~~~~~~vlv~g~~~~~g~~~~~-~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~-- 204 (325)
T TIGR02824 131 LFQRGGLKAGETVLIHGGASGIGTTAIQ-LAKAFGAR-VFTTAGSDEKCAACEALGADIAINY--REEDFVEVVKAET-- 204 (325)
T ss_pred HHHhcCCCCCCEEEEEcCcchHHHHHHH-HHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEec--CchhHHHHHHHHc--
Confidence 6 5688999999999986 999999999 99999994 6777778888888888998766553 2345555555443
Q ss_pred hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC-CccccchHhhhcCcEEEeecccC-----------CcHHHH
Q 017868 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH-EMTVPLTPAAVREVDVVGVFRYK-----------NTWPLC 319 (365)
Q Consensus 252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~ 319 (365)
.++++|++++++|.. .....+++++++|+++.++.... ........+..+++++.+..... +.+.++
T Consensus 205 ~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (325)
T TIGR02824 205 GGKGVDVILDIVGGS-YLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHV 283 (325)
T ss_pred CCCCeEEEEECCchH-HHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHH
Confidence 246799999999964 77889999999999999975331 12333344457888888765321 234667
Q ss_pred HHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 320 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 320 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+++++++.+ .+..++.|++ +++.++++.+.++...+|+++++
T Consensus 284 ~~~~~~~~l--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 284 WPLLASGRV--RPVIDKVFPL--EDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred HHHHHCCcc--cCccccEEeH--HHHHHHHHHHHhCCCcceEEEeC
Confidence 888988887 4446677878 99999999999888889999874
No 117
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.4e-29 Score=230.79 Aligned_cols=312 Identities=27% Similarity=0.391 Sum_probs=240.7
Q ss_pred ceeEEEecC---CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868 18 NMAAWLLGV---NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (365)
Q Consensus 18 ~~~~~~~~~---~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (365)
|+++++... ..+++.+.+.|.+.+++++|+|.++++|+.|+....+..... ...|.++|||++|+|+.+|+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~ 78 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP--PPLPARLGYEAAGVVEAVGAGVTG 78 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC--CCCCCCCCcceEEEEEeeCCCCCc
Confidence 456666643 477788888888999999999999999999998776643222 344778999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (365)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~ 173 (365)
|++||+|++++... ....|++++|+.++.+.++++|+++++++++.+. .+.+|+++
T Consensus 79 ~~~Gd~V~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~ 135 (328)
T cd08268 79 FAVGDRVSVIPAAD-----------------------LGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGA 135 (328)
T ss_pred CCCCCEEEeccccc-----------------------cCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHH
Confidence 99999998863211 1235899999999999999999999988887775 88889998
Q ss_pred HH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868 174 CR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 174 ~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
+. ...+.++++++|+|+ +.+|+++++ +++..|+ .++.++.++++.+.++++|++.+++.+ ..++...+.....
T Consensus 136 ~~~~~~~~~~~~vli~g~~~~~g~~~~~-~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~- 210 (328)
T cd08268 136 LVELAGLRPGDSVLITAASSSVGLAAIQ-IANAAGA-TVIATTRTSEKRDALLALGAAHVIVTD--EEDLVAEVLRITG- 210 (328)
T ss_pred HHHhcCCCCCCEEEEecCccHHHHHHHH-HHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecC--CccHHHHHHHHhC-
Confidence 74 578889999999987 999999999 8899999 467777788888888889987766543 2455555554432
Q ss_pred hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCC-ccccchHhhhcCcEEEeeccc---------CCcHHHHHH
Q 017868 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHE-MTVPLTPAAVREVDVVGVFRY---------KNTWPLCLE 321 (365)
Q Consensus 252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~ 321 (365)
+.++|++++++|+ ......+++++++|+++.+|..... ..........++..+.+.... ...++++.+
T Consensus 211 -~~~~d~vi~~~~~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (328)
T cd08268 211 -GKGVDVVFDPVGG-PQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILD 288 (328)
T ss_pred -CCCceEEEECCch-HhHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHH
Confidence 5689999999997 4778889999999999998754321 122222245677776665321 224556667
Q ss_pred HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 322 LLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 322 ~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
++.++.+. +...+.|++ +++.++++.+..+...+|++++.
T Consensus 289 ~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 289 GLASGALK--PVVDRVFPF--DDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred HHHCCCCc--CCcccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence 77778773 445677777 99999999999888889999864
No 118
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.98 E-value=1.6e-29 Score=229.86 Aligned_cols=305 Identities=30% Similarity=0.490 Sum_probs=240.4
Q ss_pred ceeEEEec---CCceEEEEecCCCCC-CCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCC
Q 017868 18 NMAAWLLG---VNTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVK 93 (365)
Q Consensus 18 ~~~~~~~~---~~~l~~~~~~~p~~~-~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 93 (365)
|+++++.. ...+++.+.+ |.+. +++++|++.++++|+.|+....|.... ....|.++|+|++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~ 77 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV--KPPLPFVPGSEVAGVVEAVGEGVT 77 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC--CCCCCCcccceeEEEEEEeCCCCC
Confidence 46778763 3567777777 7665 599999999999999999887664321 123466899999999999999999
Q ss_pred CCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHH
Q 017868 94 TLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLH 172 (365)
Q Consensus 94 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~ 172 (365)
.+++||+|+++. ..|++++|+.++.+.++++|+++++.+++.+. ...+|++
T Consensus 78 ~~~~G~~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~ 129 (323)
T cd08241 78 GFKVGDRVVALT----------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYH 129 (323)
T ss_pred CCCCCCEEEEec----------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHH
Confidence 999999999862 14889999999999999999999988877664 7888898
Q ss_pred HHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868 173 ACR-RANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 173 ~~~-~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
++. ...+.++++++|+|+ |.+|+++++ +++..|++ ++.++.++++.+.++++|+...+... ..++.+.+.....
T Consensus 130 ~~~~~~~~~~~~~vli~g~~~~~g~~~~~-~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~~ 205 (323)
T cd08241 130 ALVRRARLQPGETVLVLGAAGGVGLAAVQ-LAKALGAR-VIAAASSEEKLALARALGADHVIDYR--DPDLRERVKALTG 205 (323)
T ss_pred HHHHhcCCCCCCEEEEEcCCchHHHHHHH-HHHHhCCE-EEEEeCCHHHHHHHHHcCCceeeecC--CccHHHHHHHHcC
Confidence 875 678999999999997 999999999 99999995 77777888889988889987766533 3456666665432
Q ss_pred HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCcc-ccchHhhhcCcEEEeeccc----------CCcHHHH
Q 017868 251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMT-VPLTPAAVREVDVVGVFRY----------KNTWPLC 319 (365)
Q Consensus 251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~----------~~~~~~~ 319 (365)
+.++|++++++|. .....++++++++|+++.++....... +.......++.++.+.... .+.+.++
T Consensus 206 --~~~~d~v~~~~g~-~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (323)
T cd08241 206 --GRGVDVVYDPVGG-DVFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAEL 282 (323)
T ss_pred --CCCcEEEEECccH-HHHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHH
Confidence 5689999999996 477889999999999999876433222 2233445677777775432 2456789
Q ss_pred HHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 017868 320 LELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 364 (365)
Q Consensus 320 ~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~ 364 (365)
++++.++.+ .+..++.|++ +++.++++.+.++...+|++++
T Consensus 283 ~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 283 FDLLAEGKI--RPHVSAVFPL--EQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred HHHHHCCCc--ccccceEEcH--HHHHHHHHHHHhCCCCCcEEeC
Confidence 999999988 4556778888 9999999998888888898874
No 119
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.98 E-value=5.3e-30 Score=231.65 Aligned_cols=301 Identities=27% Similarity=0.361 Sum_probs=231.4
Q ss_pred ceeEEEecCC---ceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCC
Q 017868 18 NMAAWLLGVN---TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94 (365)
Q Consensus 18 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (365)
|+++++..++ .+++.+.+.|.++++||+|+|.++++|+.|+....|..........|.++|||++|+|+.+|+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 4677776544 3667788888899999999999999999999887764321112344788999999999999999999
Q ss_pred CCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHH
Q 017868 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHA 173 (365)
Q Consensus 95 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~ 173 (365)
+++||+|+++... ...|+|++|+.++...++++|+++++..++.++ ...+++++
T Consensus 81 ~~~G~~V~~~~~~-------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~ 135 (309)
T cd05289 81 FKVGDEVFGMTPF-------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQA 135 (309)
T ss_pred CCCCCEEEEccCC-------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHH
Confidence 9999999886310 125899999999999999999999988888775 67788888
Q ss_pred HHh-cCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868 174 CRR-ANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 174 ~~~-~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
+.. ..+.+++++||+|+ |.+|+++++ +++..|++ ++.+..++ +.++++++|++.++.... .++.+ ..
T Consensus 136 ~~~~~~~~~~~~vlv~g~~g~~g~~~~~-~a~~~g~~-v~~~~~~~-~~~~~~~~g~~~~~~~~~--~~~~~------~~ 204 (309)
T cd05289 136 LFELGGLKAGQTVLIHGAAGGVGSFAVQ-LAKARGAR-VIATASAA-NADFLRSLGADEVIDYTK--GDFER------AA 204 (309)
T ss_pred HHhhcCCCCCCEEEEecCCchHHHHHHH-HHHHcCCE-EEEEecch-hHHHHHHcCCCEEEeCCC--Cchhh------cc
Confidence 854 56899999999997 999999999 99999995 55555556 788888899877665432 23322 12
Q ss_pred hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeeccc--CCcHHHHHHHHHcCCCC
Q 017868 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRY--KNTWPLCLELLRSGKID 329 (365)
Q Consensus 252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~ 329 (365)
.+.++|++++++|+. ....++++++++|+++.++....... ....++.+....... .+.+.+++++++++.+
T Consensus 205 ~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 278 (309)
T cd05289 205 APGGVDAVLDTVGGE-TLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEPDGEQLAELAELVEAGKL- 278 (309)
T ss_pred CCCCceEEEECCchH-HHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecccHHHHHHHHHHHHCCCE-
Confidence 356899999999976 77899999999999999875432111 222334443333211 4578889999999987
Q ss_pred CCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868 330 VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363 (365)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi 363 (365)
.+..++.|++ ++++++++.+..+...+|+++
T Consensus 279 -~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 279 -RPVVDRVFPL--EDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred -EEeeccEEcH--HHHHHHHHHHHhCCCCCcEeC
Confidence 4556788888 999999999988877788774
No 120
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=9.2e-30 Score=231.32 Aligned_cols=295 Identities=27% Similarity=0.322 Sum_probs=221.9
Q ss_pred EEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCC
Q 017868 30 KIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISC 109 (365)
Q Consensus 30 ~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 109 (365)
++.+.|.|++.++||+|++.++++|+.|.....|..........|..+|+|++|+|.++|++++++++||+|++....
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-- 92 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-- 92 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence 778899999999999999999999999998877643211112346789999999999999999999999999876321
Q ss_pred CCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHHHh-cCCCCCCEEEE
Q 017868 110 WRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRR-ANIGPETNVLI 187 (365)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~~~-~~~~~g~~vlI 187 (365)
...|+|++|+.++.+.++++|+++++++++.++ .+.+||++++. .++++|++|+|
T Consensus 93 -----------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli 149 (319)
T cd08267 93 -----------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLI 149 (319)
T ss_pred -----------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEE
Confidence 135899999999999999999999998888775 78889999854 56899999999
Q ss_pred EcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCH
Q 017868 188 MGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN 266 (365)
Q Consensus 188 ~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~ 266 (365)
+|+ |.+|+++++ +++..|++ +++++++ ++.+.++++|++.+++... .++. +.. ..++++|++++|+|..
T Consensus 150 ~g~~g~~g~~~~~-la~~~g~~-v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~~~--~~~~~~d~vi~~~~~~ 219 (319)
T cd08267 150 NGASGGVGTFAVQ-IAKALGAH-VTGVCST-RNAELVRSLGADEVIDYTT--EDFV---ALT--AGGEKYDVIFDAVGNS 219 (319)
T ss_pred EcCCcHHHHHHHH-HHHHcCCE-EEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---hhc--cCCCCCcEEEECCCch
Confidence 997 999999999 99999994 6666554 7888889999877665432 2332 111 2357899999999842
Q ss_pred -HHHHHHHHhcccCCEEEEEccCCCCccccc-----h-HhhhcCcEEEeecccCCcHHHHHHHHHcCCCCCCCceEEEec
Q 017868 267 -KTMSTALGATCAGGKVCLVGMGHHEMTVPL-----T-PAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFG 339 (365)
Q Consensus 267 -~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~-----~-~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~ 339 (365)
......+..++++|+++.+|.......... . ....+.+.........+.+.+++++++++.+ .+..++.|+
T Consensus 220 ~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~ 297 (319)
T cd08267 220 PFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKL--KPVIDSVYP 297 (319)
T ss_pred HHHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCe--eeeeeeEEc
Confidence 233344445999999999985432211111 1 1112222222221125678899999999988 455778888
Q ss_pred CChhhHHHHHHHHhcCCCceEEEE
Q 017868 340 FSQKEVEEAFETSARGGTAIKVMF 363 (365)
Q Consensus 340 ~~~~~~~~a~~~~~~~~~~gk~vi 363 (365)
+ +++.+|++.+.++...+|+++
T Consensus 298 ~--~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 298 L--EDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred H--HHHHHHHHHHhcCCCCCcEeC
Confidence 8 999999999998888888874
No 121
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=9.4e-29 Score=226.44 Aligned_cols=296 Identities=29% Similarity=0.382 Sum_probs=231.7
Q ss_pred CceEEEEecCCCCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCC
Q 017868 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG 106 (365)
Q Consensus 27 ~~l~~~~~~~p~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 106 (365)
..+++.+.+.|.+.++||+|++.++++|+.|+....|.... ....|.++|+|++|+|+.+|++++++++||+|+++.
T Consensus 12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~- 88 (337)
T cd08275 12 DKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS--APKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLT- 88 (337)
T ss_pred cceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEec-
Confidence 36788888888899999999999999999999887764321 124477899999999999999999999999998852
Q ss_pred cCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCE
Q 017868 107 ISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETN 184 (365)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~ 184 (365)
..|+|++|+.++.+.++++|+++++.+++.++ ++.+|++++ +.+++++|++
T Consensus 89 ---------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 141 (337)
T cd08275 89 ---------------------------RFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQS 141 (337)
T ss_pred ---------------------------CCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCE
Confidence 24889999999999999999999998888776 888899987 4688999999
Q ss_pred EEEEcC-CHHHHHHHHHHHHHCCCCeEEEEe-CChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868 185 VLIMGA-GPIGLVTMLGAPRAFGAPRIVIVD-VDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 262 (365)
Q Consensus 185 vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~ 262 (365)
|+|+|+ |.+|+++++ +++.. . .+.+++ .++++.++++.+|++.+++. ...++...++... +.++|+++|+
T Consensus 142 vli~g~~g~~g~~~~~-~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~---~~~~d~v~~~ 213 (337)
T cd08275 142 VLVHSAAGGVGLAAGQ-LCKTV-P-NVTVVGTASASKHEALKENGVTHVIDY--RTQDYVEEVKKIS---PEGVDIVLDA 213 (337)
T ss_pred EEEEcCcchHHHHHHH-HHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEeeC--CCCcHHHHHHHHh---CCCceEEEEC
Confidence 999997 999999999 88887 2 233333 34567888888998776653 3356666666553 4689999999
Q ss_pred CCCHHHHHHHHHhcccCCEEEEEccCCCCc--c---------------ccchHhhhcCcEEEeeccc---------CCcH
Q 017868 263 AGLNKTMSTALGATCAGGKVCLVGMGHHEM--T---------------VPLTPAAVREVDVVGVFRY---------KNTW 316 (365)
Q Consensus 263 ~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~--~---------------~~~~~~~~~~~~i~~~~~~---------~~~~ 316 (365)
+|+. .....+++++++|+++.+|...... . .....+..++.++.+.... ...+
T Consensus 214 ~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (337)
T cd08275 214 LGGE-DTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVM 292 (337)
T ss_pred CcHH-HHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHH
Confidence 9975 6788999999999999987543210 1 1112345667777665421 1246
Q ss_pred HHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 317 PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 317 ~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
.+++++++++.+ .+..++.|++ ++++++++.+.++...+|+++++
T Consensus 293 ~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 293 DKLLKLYEEGKI--KPKIDSVFPF--EEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHHCCCC--CCceeeEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence 778889999987 4456677888 99999999999888889999864
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=8.1e-29 Score=221.79 Aligned_cols=276 Identities=25% Similarity=0.322 Sum_probs=216.7
Q ss_pred CcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCC
Q 017868 42 YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYN 121 (365)
Q Consensus 42 ~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~ 121 (365)
+||+|||.++++|+.|+....|.. ..+|.++|+|++|+|+++|++++.|++||+|+++
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~-----~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~----------------- 58 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL-----PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL----------------- 58 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC-----CCCCCccceeeeEEEEeecCCccCCCCCCEEEEE-----------------
Confidence 589999999999999999887642 2357899999999999999999999999999875
Q ss_pred CCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcC-CHHHHHHH
Q 017868 122 LCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTM 198 (365)
Q Consensus 122 ~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~-g~~G~~ai 198 (365)
..|+|+||+.++.+.++++|+++++.+++.++ +..+++.++ +...+++|++|+|+|+ |.+|++++
T Consensus 59 ------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~ 126 (293)
T cd05195 59 ------------APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAI 126 (293)
T ss_pred ------------ecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHH
Confidence 24899999999999999999999999888875 778898887 4588999999999975 99999999
Q ss_pred HHHHHHCCCCeEEEEeCChhHHHHHHHcC--CCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhc
Q 017868 199 LGAPRAFGAPRIVIVDVDDYRLSVAKEIG--ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGAT 276 (365)
Q Consensus 199 ~~l~~~~g~~~vi~v~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l 276 (365)
+ +++..|+ .++.+..++++.+.+++++ ++.+++. ...++.+.+++... +.++|+++|++|.. .....++++
T Consensus 127 ~-~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~d~vi~~~~~~-~~~~~~~~l 199 (293)
T cd05195 127 Q-LAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSS--RDLSFADGILRATG--GRGVDVVLNSLSGE-LLRASWRCL 199 (293)
T ss_pred H-HHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeec--CchhHHHHHHHHhC--CCCceEEEeCCCch-HHHHHHHhc
Confidence 9 9999999 5777778888888888887 5666553 23455555655432 56899999999986 888999999
Q ss_pred ccCCEEEEEccCCCC--ccccchHhhhcCcEEEeecc-----c-----CCcHHHHHHHHHcCCCCCCCceEEEecCChhh
Q 017868 277 CAGGKVCLVGMGHHE--MTVPLTPAAVREVDVVGVFR-----Y-----KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKE 344 (365)
Q Consensus 277 ~~~G~~~~~g~~~~~--~~~~~~~~~~~~~~i~~~~~-----~-----~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~ 344 (365)
+++|+++.++..... ...... ...++..+..... . .+.+.+++++++++.+ .+..++.+.+ ++
T Consensus 200 ~~~g~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~ 274 (293)
T cd05195 200 APFGRFVEIGKRDILSNSKLGMR-PFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVL--KPLPPTVVPS--AS 274 (293)
T ss_pred ccCceEEEeeccccccCCccchh-hhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCc--ccCCCeeech--hh
Confidence 999999998754321 111111 1223344333211 1 2356788899999988 4556667777 89
Q ss_pred HHHHHHHHhcCCCceEEEE
Q 017868 345 VEEAFETSARGGTAIKVMF 363 (365)
Q Consensus 345 ~~~a~~~~~~~~~~gk~vi 363 (365)
+.++++.+..+...+|+++
T Consensus 275 ~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 275 EIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred HHHHHHHHhcCCCCceecC
Confidence 9999999998888888774
No 123
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=7.8e-28 Score=214.41 Aligned_cols=247 Identities=29% Similarity=0.400 Sum_probs=196.2
Q ss_pred ccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCc
Q 017868 69 FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148 (365)
Q Consensus 69 ~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~ 148 (365)
++..+|.++|+|++|+|+++|+++++|++||+|+++ +.|++|++++.+.
T Consensus 16 ~~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-------------------------------~~~~~~~~v~~~~ 64 (277)
T cd08255 16 EKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-------------------------------GPHAERVVVPANL 64 (277)
T ss_pred ccCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-------------------------------CCcceEEEcCHHH
Confidence 446688999999999999999999999999999875 4689999999999
Q ss_pred eEECCCCCCcchhccchhhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-
Q 017868 149 CFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG- 227 (365)
Q Consensus 149 ~~~iP~~~~~~~a~~~~~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g- 227 (365)
++++|+++++++++.+.++.+||++++.+++++|+++||+|+|.+|+++++ +++.+|+++++++++++++.++++++|
T Consensus 65 ~~~ip~~l~~~~aa~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~vg~~~i~-~a~~~g~~~vi~~~~~~~~~~~~~~~g~ 143 (277)
T cd08255 65 LVPLPDGLPPERAALTALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQ-LAKAAGAREVVGVDPDAARRELAEALGP 143 (277)
T ss_pred eeECcCCCCHHHhHHHHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCcEEEECCCHHHHHHHHHcCC
Confidence 999999999988887777888999988888999999999988999999999 999999965888888999999999999
Q ss_pred CCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEE
Q 017868 228 ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV 307 (365)
Q Consensus 228 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~ 307 (365)
++.+..... .. ..+.++|++||+++........+++++++|+++.+|............+..+..++.
T Consensus 144 ~~~~~~~~~----------~~--~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~ 211 (277)
T cd08255 144 ADPVAADTA----------DE--IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIR 211 (277)
T ss_pred Cccccccch----------hh--hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEE
Confidence 444332111 01 125689999999887778889999999999999998643331111122344454555
Q ss_pred eeccc-------------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcC-CCceEEEE
Q 017868 308 GVFRY-------------KNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG-GTAIKVMF 363 (365)
Q Consensus 308 ~~~~~-------------~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~gk~vi 363 (365)
+.... .+.+++++++++++.+ .+...+.|++ +++++|++.+.++ ....|+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 212 SSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRL--EALITHRVPF--EDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred eecccccccccccccccccccHHHHHHHHHcCCc--cccccCccCH--HHHHHHHHHHHcCCccceeeeC
Confidence 54321 2568899999999987 4446677777 9999999998877 56677764
No 124
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.96 E-value=1.7e-27 Score=212.83 Aligned_cols=271 Identities=28% Similarity=0.399 Sum_probs=212.6
Q ss_pred EEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCC
Q 017868 46 VRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE 125 (365)
Q Consensus 46 I~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~ 125 (365)
|||.++++|+.|+..+.|.. ..|.++|+|++|+|+.+|++++.|++||+|++.
T Consensus 2 i~v~~~~i~~~d~~~~~g~~------~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~--------------------- 54 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLL------PGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL--------------------- 54 (288)
T ss_pred eeEEEEecCHHHHHHhcCCC------CCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE---------------------
Confidence 89999999999999887642 236789999999999999999999999999875
Q ss_pred ccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH-HhcCCCCCCEEEEEcC-CHHHHHHHHHHH
Q 017868 126 MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRANIGPETNVLIMGA-GPIGLVTMLGAP 202 (365)
Q Consensus 126 ~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~ 202 (365)
..|+|++|+.++.+.++++|+++++.+++.++ ...++++++ +...+.+|++|+|+|+ |.+|+++++ ++
T Consensus 55 --------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~-~a 125 (288)
T smart00829 55 --------APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQ-LA 125 (288)
T ss_pred --------cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHH-HH
Confidence 23899999999999999999999999988876 778899887 5688999999999985 999999999 99
Q ss_pred HHCCCCeEEEEeCChhHHHHHHHcCC--CEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCC
Q 017868 203 RAFGAPRIVIVDVDDYRLSVAKEIGA--DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGG 280 (365)
Q Consensus 203 ~~~g~~~vi~v~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G 280 (365)
+..|+ .++++++++++.+.++++|+ +.++++. ..++.+.+.+... +.++|+++|++|. ......+++++++|
T Consensus 126 ~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~--~~~~d~vi~~~~~-~~~~~~~~~l~~~g 199 (288)
T smart00829 126 QHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSR--DLSFADEILRATG--GRGVDVVLNSLAG-EFLDASLRCLAPGG 199 (288)
T ss_pred HHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCC--CccHHHHHHHHhC--CCCcEEEEeCCCH-HHHHHHHHhccCCc
Confidence 99999 57888888999999999998 5665542 3456565655432 5689999999995 57788999999999
Q ss_pred EEEEEccCCC--CccccchHhhhcCcEEEeecc---------cCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHH
Q 017868 281 KVCLVGMGHH--EMTVPLTPAAVREVDVVGVFR---------YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 349 (365)
Q Consensus 281 ~~~~~g~~~~--~~~~~~~~~~~~~~~i~~~~~---------~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~ 349 (365)
+++.+|.... ....+... ..+++++.+... ..+.+.+++++++++.+. +...+.|++ +++.+++
T Consensus 200 ~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~ 274 (288)
T smart00829 200 RFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLR--PLPVTVFPI--SDVEDAF 274 (288)
T ss_pred EEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCcc--CcCceEEcH--HHHHHHH
Confidence 9999975431 11112111 234444444321 123467788899888874 335577877 9999999
Q ss_pred HHHhcCCCceEEEE
Q 017868 350 ETSARGGTAIKVMF 363 (365)
Q Consensus 350 ~~~~~~~~~gk~vi 363 (365)
+.+..+...+|+++
T Consensus 275 ~~~~~~~~~~~ivv 288 (288)
T smart00829 275 RYMQQGKHIGKVVL 288 (288)
T ss_pred HHHhcCCCcceEeC
Confidence 99998877788764
No 125
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.95 E-value=4.7e-27 Score=226.11 Aligned_cols=294 Identities=19% Similarity=0.218 Sum_probs=234.4
Q ss_pred CceEEEEecCC---CCCCCcEEEEEeeeeeCcccHhhhhccccCCcc----CCCCcccCccceEEEEEeCCCCCCCCCCC
Q 017868 27 NTLKIQPFELP---SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV----VKEPMVIGHECAGVIEKVGSEVKTLVPGD 99 (365)
Q Consensus 27 ~~l~~~~~~~p---~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~----~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd 99 (365)
..+++.+.|.. +..++.=+.-|.|+.+|.+|+.+..|+...+.. ....+++|.||+|+- +-|.
T Consensus 1427 sSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd----------~~Gr 1496 (2376)
T KOG1202|consen 1427 SSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRD----------ASGR 1496 (2376)
T ss_pred cceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecccc----------CCCc
Confidence 58889888865 347777899999999999999999997654421 233578999999984 4599
Q ss_pred EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCCCCcchhccch-hhHHHHHHH-Hhc
Q 017868 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHAC-RRA 177 (365)
Q Consensus 100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~-~~~~a~~~~-~~~ 177 (365)
||.++.+ .-++++.+.++.++++.+|++...++|+++| .++||||++ .++
T Consensus 1497 RvM~mvp----------------------------AksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG 1548 (2376)
T KOG1202|consen 1497 RVMGMVP----------------------------AKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRG 1548 (2376)
T ss_pred EEEEeee----------------------------hhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhc
Confidence 9988732 3568889999999999999999999999998 788999997 689
Q ss_pred CCCCCCEEEEE-cCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC--CCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868 178 NIGPETNVLIM-GAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG--ADNIVKVSTNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 178 ~~~~g~~vlI~-G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~i~~~~~~~~~ 254 (365)
..++|+++||+ |+|++|+++|. +|.+.|+ .|+++..+.+|++++.++- ......-++++.+|...+.. .+.|+
T Consensus 1549 ~mkkGekiLIHaGsGGVGQAAIa-iALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~--~T~Gr 1624 (2376)
T KOG1202|consen 1549 QMKKGEKILIHAGSGGVGQAAIA-IALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLW--HTKGR 1624 (2376)
T ss_pred cccCCcEEEEecCCCchhHHHHH-HHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHH--HhcCC
Confidence 99999999999 56999999999 8889999 5677778899999876543 22222234666788777754 44599
Q ss_pred CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCc-cccchHhhhcCcEEEeeccc------CCcHHHHHHHHHcCC
Q 017868 255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEM-TVPLTPAAVREVDVVGVFRY------KNTWPLCLELLRSGK 327 (365)
Q Consensus 255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~g~ 327 (365)
|+|+|++.... +.++.+++||+.+|++..+|-...+. .+.-.....++.+++|.... .++|.++..++++|.
T Consensus 1625 GVdlVLNSLae-EkLQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGI 1703 (2376)
T KOG1202|consen 1625 GVDLVLNSLAE-EKLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGI 1703 (2376)
T ss_pred CeeeehhhhhH-HHHHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhh
Confidence 99999998875 58899999999999999998433322 33334467788888886532 457888888888875
Q ss_pred CC--CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 328 ID--VKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 328 ~~--~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
-. ..|+.+++|+- .++++||+++.++++.||+|+.+
T Consensus 1704 ksGvV~PL~ttvF~~--~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1704 KSGVVRPLPTTVFHG--QQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred ccCceeccccccccH--HHHHHHHHHHhccCccceEEEEE
Confidence 53 58888888877 99999999999999999999874
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.94 E-value=6.6e-24 Score=178.97 Aligned_cols=293 Identities=17% Similarity=0.191 Sum_probs=218.2
Q ss_pred CceEE--EEecCC-CCCCCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccC----ccceEEEEEeCCCCCCCCCCC
Q 017868 27 NTLKI--QPFELP-SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIG----HECAGVIEKVGSEVKTLVPGD 99 (365)
Q Consensus 27 ~~l~~--~~~~~p-~~~~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G----~e~~G~V~~vG~~v~~~~~Gd 99 (365)
..+.+ .+++++ ++++++|+||..|.+.+|.-...+.--.... .-.|+.+| ..++|.|++. +-+++++||
T Consensus 20 ~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~--y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD 95 (343)
T KOG1196|consen 20 SDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSD--YAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGD 95 (343)
T ss_pred ccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCccc--ccCcccCCcEecCCceEEEEec--CCCCCCcCc
Confidence 34444 345544 4689999999999999987655443221111 22344444 2678999885 557799999
Q ss_pred EEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCce--EECCC--CCCcch--hccchhhHHHHHH
Q 017868 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLC--FKLPD--NVSLEE--GAMCEPLSVGLHA 173 (365)
Q Consensus 100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~--~~iP~--~~~~~~--a~~~~~~~~a~~~ 173 (365)
.|.+. =+|.||.+++.... +++|. +.++.. .++=++..|||..
T Consensus 96 ~v~g~-------------------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~G 144 (343)
T KOG1196|consen 96 LVWGI-------------------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAG 144 (343)
T ss_pred eEEEe-------------------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHH
Confidence 99876 37999999987544 44443 333333 3333588899998
Q ss_pred H-HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCEEEeCCCCcccHHHHHHHHHH
Q 017868 174 C-RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 174 ~-~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
+ ++...++|++|+|.|| |++|+++.| +|+.+|+ .|++...+++|.++++. +|.+..++|.+. .+..+.+++.
T Consensus 145 f~ei~~pk~geTv~VSaAsGAvGql~GQ-~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e-~~~~~aL~r~-- 219 (343)
T KOG1196|consen 145 FYEICSPKKGETVFVSAASGAVGQLVGQ-FAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEE-SDLSAALKRC-- 219 (343)
T ss_pred HHHhcCCCCCCEEEEeeccchhHHHHHH-HHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCc-cCHHHHHHHh--
Confidence 7 6788999999999987 999999999 9999999 79999999999998855 799999998653 3677777764
Q ss_pred HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC---CCcc---ccchHhhhcCcEEEeeccc------CCcHHH
Q 017868 251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH---HEMT---VPLTPAAVREVDVVGVFRY------KNTWPL 318 (365)
Q Consensus 251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~---~~~~---~~~~~~~~~~~~i~~~~~~------~~~~~~ 318 (365)
.+.++|+.||.+|+. +++..+.-|+..|+++.+|+-+ .+.+ ..+..+..|++++.++... .+.+..
T Consensus 220 -~P~GIDiYfeNVGG~-~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~ 297 (343)
T KOG1196|consen 220 -FPEGIDIYFENVGGK-MLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDF 297 (343)
T ss_pred -CCCcceEEEeccCcH-HHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHH
Confidence 478999999999986 8899999999999999998532 1222 2233467899999886543 456678
Q ss_pred HHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 017868 319 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 365 (365)
Q Consensus 319 ~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi~~ 365 (365)
+..++++|+|.....+. -.| +....|+.-+.+++..||+++.+
T Consensus 298 l~~~ikegKI~y~edi~--~Gl--en~P~A~vglf~GkNvGKqiv~v 340 (343)
T KOG1196|consen 298 LLPYIKEGKITYVEDIA--DGL--ENGPSALVGLFHGKNVGKQLVKV 340 (343)
T ss_pred HHHHHhcCceEEehhHH--HHH--hccHHHHHHHhccCcccceEEEe
Confidence 88999999995443332 236 88999999999999999999864
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.90 E-value=8.1e-24 Score=160.60 Aligned_cols=109 Identities=39% Similarity=0.702 Sum_probs=97.1
Q ss_pred CCcEEEEEeeeeeCcccHhhhhccccCCccCCCCcccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCC
Q 017868 41 PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRY 120 (365)
Q Consensus 41 ~~eVlI~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~ 120 (365)
|+||+|||+++++|++|++.+.|. .......|.++|||++|+|+++|+++++|++||||++.+...|+.|++|..+.+
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~--~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~ 78 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGG--PPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP 78 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTS--SSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhc--cccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence 789999999999999999999874 223367899999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccccCCCCcceeeEEeecCCceEEC
Q 017868 121 NLCPEMKFFATPPVHGSLANQVVHPADLCFKL 152 (365)
Q Consensus 121 ~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i 152 (365)
++|++...++.. .+|+|+||+.+++++++++
T Consensus 79 ~~c~~~~~~g~~-~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 79 NLCPNPEVLGLG-LDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GGTTTBEETTTS-STCSSBSEEEEEGGGEEEE
T ss_pred ccCCCCCEeEcC-CCCcccCeEEEehHHEEEC
Confidence 999988888875 7899999999999999875
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.68 E-value=8.5e-16 Score=120.62 Aligned_cols=128 Identities=27% Similarity=0.561 Sum_probs=112.4
Q ss_pred HHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHH
Q 017868 192 PIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMST 271 (365)
Q Consensus 192 ~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~ 271 (365)
++|++++| +|+..|+ +|++++++++|+++++++|++.++++++ .++.+.+++++. +.++|+||||+|....++.
T Consensus 1 ~vG~~a~q-~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~~--~~~~d~vid~~g~~~~~~~ 74 (130)
T PF00107_consen 1 GVGLMAIQ-LAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELTG--GRGVDVVIDCVGSGDTLQE 74 (130)
T ss_dssp HHHHHHHH-HHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHTT--TSSEEEEEESSSSHHHHHH
T ss_pred ChHHHHHH-HHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--cccccccccccc--cccceEEEEecCcHHHHHH
Confidence 58999999 9999995 8999999999999999999999988654 568888888753 4699999999998889999
Q ss_pred HHHhcccCCEEEEEccCC-CCccccchHhhhcCcEEEeecccC-CcHHHHHHHHHc
Q 017868 272 ALGATCAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVGVFRYK-NTWPLCLELLRS 325 (365)
Q Consensus 272 ~~~~l~~~G~~~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~l~~ 325 (365)
++.+++++|+++.+|... ....++...++.+++++.+++.+. ++++++++++.+
T Consensus 75 ~~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 75 AIKLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp HHHHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred HHHHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence 999999999999999876 566788888999999999999885 889999988764
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.38 E-value=2.4e-11 Score=111.82 Aligned_cols=173 Identities=18% Similarity=0.248 Sum_probs=134.1
Q ss_pred HHHHH-HhcC-CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 017868 170 GLHAC-RRAN-IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 247 (365)
Q Consensus 170 a~~~~-~~~~-~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~ 247 (365)
++.++ +..+ .-+|++|+|.|+|.+|+.+++ .++.+|+ +|++++.++.|.+.++.+|+..+ + .. +
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~-~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~----e 253 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQ-SLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------ME----E 253 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HH----H
Confidence 34444 3333 468999999999999999999 8899999 58889999999999999998432 1 11 1
Q ss_pred HHHHhCCCceEEEeCCCCHHHHHHH-HHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCC--cHH--HHHHH
Q 017868 248 IQKAMGTGIDVSFDCAGLNKTMSTA-LGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKN--TWP--LCLEL 322 (365)
Q Consensus 248 ~~~~~~~~~d~vid~~g~~~~~~~~-~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~--~~~~~ 322 (365)
. -.++|+||+|+|....+... +..++++|.++.+|.. +..++...+..+.+++.+++.+.. .+. +++.+
T Consensus 254 ~----v~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~L 327 (413)
T cd00401 254 A----VKEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIIL 327 (413)
T ss_pred H----HcCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhh
Confidence 1 13689999999988777775 9999999999999854 446777778889999999887733 455 79999
Q ss_pred HHcCCC-CCCCceEEE-----ecCChh-hHHHHHHHHhcCCC-ceEEEEe
Q 017868 323 LRSGKI-DVKPLVTHR-----FGFSQK-EVEEAFETSARGGT-AIKVMFN 364 (365)
Q Consensus 323 l~~g~~-~~~~~~~~~-----~~~~~~-~~~~a~~~~~~~~~-~gk~vi~ 364 (365)
+.+|.+ ++.+.++|. |+| + |+.+++..+.+... ..|+++.
T Consensus 328 La~Grlvnl~~~~gH~~~vmd~sf--~~q~l~a~~l~~~~~~~~~kV~~~ 375 (413)
T cd00401 328 LAEGRLVNLGCATGHPSFVMSNSF--TNQVLAQIELWTNRDKYEVGVYFL 375 (413)
T ss_pred hhCcCCCCCcccCCCccceechhH--HHHHHHHHHHHhcCCcCCCcEEEC
Confidence 999999 777767666 666 7 99999998877643 3566553
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.33 E-value=3.6e-11 Score=113.42 Aligned_cols=155 Identities=17% Similarity=0.256 Sum_probs=113.9
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE-EeCCCC-----------cccHHHHHH
Q 017868 179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNI-VKVSTN-----------LQDIAEEVE 246 (365)
Q Consensus 179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~-~~~~~~-----------~~~~~~~i~ 246 (365)
..++++|+|.|+|.+|+++++ .++.+|+ .|++++.++++.+.++++|++.+ ++..+. ..++.+..+
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~-~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIG-AAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 468999999999999999999 9999999 69999999999999999999854 432211 112222222
Q ss_pred HHHHHhCCCceEEEeCCCCH-----HH-HHHHHHhcccCCEEEEEccC-CCC--ccccchHhhh-cCcEEEeecccCCcH
Q 017868 247 KIQKAMGTGIDVSFDCAGLN-----KT-MSTALGATCAGGKVCLVGMG-HHE--MTVPLTPAAV-REVDVVGVFRYKNTW 316 (365)
Q Consensus 247 ~~~~~~~~~~d~vid~~g~~-----~~-~~~~~~~l~~~G~~~~~g~~-~~~--~~~~~~~~~~-~~~~i~~~~~~~~~~ 316 (365)
+......+++|+||+|+|.+ .. ...+++.++++|.++.++.. ... ...+...+.. +++++.|.++....+
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~ 319 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRL 319 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhH
Confidence 22111125799999999963 24 48999999999999999864 332 3333445554 899999988775444
Q ss_pred H-HHHHHHHcCCCCCCCceE
Q 017868 317 P-LCLELLRSGKIDVKPLVT 335 (365)
Q Consensus 317 ~-~~~~~l~~g~~~~~~~~~ 335 (365)
. ++.+++.++.+.+.+.++
T Consensus 320 p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 320 PTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred HHHHHHHHHhCCccHHHHhc
Confidence 4 699999999886544443
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.27 E-value=3.3e-12 Score=99.68 Aligned_cols=119 Identities=25% Similarity=0.361 Sum_probs=78.4
Q ss_pred cCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCC--CHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcC
Q 017868 226 IGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG--LNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVRE 303 (365)
Q Consensus 226 ~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~ 303 (365)
||++++++|.. +++ ..++++|+|||++| ....+..++++| ++|+++.++. .............
T Consensus 1 LGAd~vidy~~--~~~---------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~---~~~~~~~~~~~~~ 65 (127)
T PF13602_consen 1 LGADEVIDYRD--TDF---------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG---DLPSFARRLKGRS 65 (127)
T ss_dssp CT-SEEEETTC--SHH---------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S---HHHHHHHHHHCHH
T ss_pred CCcCEEecCCC--ccc---------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC---cccchhhhhcccc
Confidence 68999998863 444 22689999999999 654446777888 9999988863 1000000011223
Q ss_pred cEEEeecc------cCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 017868 304 VDVVGVFR------YKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 363 (365)
Q Consensus 304 ~~i~~~~~------~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vi 363 (365)
.+...... ..+.++++.+++++|++ ++.+.++|+| +++.+|++.+++++..||+||
T Consensus 66 ~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l--~~~i~~~f~l--~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 66 IRYSFLFSVDPNAIRAEALEELAELVAEGKL--KPPIDRVFPL--EEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp CEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEG--GGHHHHHHHHHCT--SSEEEE
T ss_pred eEEEEEEecCCCchHHHHHHHHHHHHHCCCe--EEeeccEECH--HHHHHHHHHHHhCCCCCeEeC
Confidence 33333331 13458999999999999 7888899999 999999999999999999997
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.45 E-value=2.5e-06 Score=75.66 Aligned_cols=172 Identities=18% Similarity=0.247 Sum_probs=103.0
Q ss_pred hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCC-eEEEEeCChhHHHHHHHc----CCCEEEeCCCCcccHHHHHHHHHH
Q 017868 176 RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAP-RIVIVDVDDYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 176 ~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~-~vi~v~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
.+.+++|++||..|+|. |..+++ +++..|.. .+++++.+++..+.+++. +...+.... .+ +.++.
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~-~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~---~d----~~~l~- 141 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFL-AARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL---GE----IEALP- 141 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHH-HHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE---cc----hhhCC-
Confidence 46788999999999877 877777 66666653 699999999888877653 433221111 11 11111
Q ss_pred HhCCCceEEEeCC------CCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEE-eecccCCcHHHHHHHH
Q 017868 251 AMGTGIDVSFDCA------GLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV-GVFRYKNTWPLCLELL 323 (365)
Q Consensus 251 ~~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~l 323 (365)
...+.+|+|+... .....+..+.++|+++|++++.+..... . ......+...+. +.........+..+++
T Consensus 142 ~~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~e~~~~l 218 (272)
T PRK11873 142 VADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-E--LPEEIRNDAELYAGCVAGALQEEEYLAML 218 (272)
T ss_pred CCCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-C--CCHHHHHhHHHHhccccCCCCHHHHHHHH
Confidence 1145799998643 2345788999999999999987643222 1 111111222222 1112234566777888
Q ss_pred HcCCCC-CCCceEEEecCChhhHHHHHHHH--hcCCCceEEE
Q 017868 324 RSGKID-VKPLVTHRFGFSQKEVEEAFETS--ARGGTAIKVM 362 (365)
Q Consensus 324 ~~g~~~-~~~~~~~~~~~~~~~~~~a~~~~--~~~~~~gk~v 362 (365)
++..+. ......+.+++ ++..++++.+ ..+...++.+
T Consensus 219 ~~aGf~~v~i~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~ 258 (272)
T PRK11873 219 AEAGFVDITIQPKREYRI--PDAREFLEDWGIAPGRQLDGYI 258 (272)
T ss_pred HHCCCCceEEEeccceec--ccHHHHHHHhccccccccCceE
Confidence 775442 23333445566 8888888887 5544444444
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.42 E-value=6e-06 Score=78.18 Aligned_cols=105 Identities=19% Similarity=0.263 Sum_probs=78.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCC-------------cccHHHHHH
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTN-------------LQDIAEEVE 246 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~-------------~~~~~~~i~ 246 (365)
.++++++|.|+|.+|+++++ +++.+|+ .|++++.++++.+.++++|+..+.. +.. ++++.+...
T Consensus 162 vp~akVlViGaG~iGl~Aa~-~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v-~~~e~g~~~~gYa~~~s~~~~~~~~ 238 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIG-AANSLGA-IVRAFDTRPEVKEQVQSMGAEFLEL-DFKEEGGSGDGYAKVMSEEFIAAEM 238 (511)
T ss_pred CCCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEec-cccccccccccceeecCHHHHHHHH
Confidence 46799999999999999999 9999999 4888899999999999999876322 111 123333333
Q ss_pred HHHHHhCCCceEEEeCC---CCHH---HHHHHHHhcccCCEEEEEcc
Q 017868 247 KIQKAMGTGIDVSFDCA---GLNK---TMSTALGATCAGGKVCLVGM 287 (365)
Q Consensus 247 ~~~~~~~~~~d~vid~~---g~~~---~~~~~~~~l~~~G~~~~~g~ 287 (365)
+.......++|++|+|+ |.+. .....++.+++++.++.++.
T Consensus 239 ~~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~ 285 (511)
T TIGR00561 239 ELFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAA 285 (511)
T ss_pred HHHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeee
Confidence 32222246899999999 6432 45577899999999998864
No 134
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.33 E-value=5.4e-05 Score=66.97 Aligned_cols=257 Identities=12% Similarity=0.074 Sum_probs=139.9
Q ss_pred cccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCcccccc----CCCCcceeeEEeecCCceE
Q 017868 75 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT----PPVHGSLANQVVHPADLCF 150 (365)
Q Consensus 75 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~v~~~~~~ 150 (365)
.+|-..+ ++|++ +++.++.+|+||.++.+.. ..+.-.+..-++..+... ..-...|-+|.++..+..+
T Consensus 32 ~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~a-----shl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y 103 (314)
T PF11017_consen 32 IVPVWGF-ATVVE--SRHPGIAVGERLYGYFPMA-----SHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAY 103 (314)
T ss_pred ccccceE-EEEEe--eCCCCccCccEEEeecccc-----ceeEEeccccCCCccccChhhhCcCchhhhceeecCCCccc
Confidence 3454544 45554 8889999999999975422 112222222222223322 1223556777777655444
Q ss_pred ECCCCCCcchhccchhhHHHHHHHHh---cCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc
Q 017868 151 KLPDNVSLEEGAMCEPLSVGLHACRR---ANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI 226 (365)
Q Consensus 151 ~iP~~~~~~~a~~~~~~~~a~~~~~~---~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~ 226 (365)
. +......+..-|.+.|+|..-+. ...-..+.|+|..| +..+..++..|.+..+...+|+++ +..+..+.+.+
T Consensus 104 ~--~~~e~~~~LlrPLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve~l 180 (314)
T PF11017_consen 104 D--PEREDWQMLLRPLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVESL 180 (314)
T ss_pred C--cchhHHHHHHHHHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhhcc
Confidence 2 11111122223566677755322 22233456777776 778888888454355666889985 56667799999
Q ss_pred CC-CEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCC-EEEEEccCCCCcc-----------
Q 017868 227 GA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGG-KVCLVGMGHHEMT----------- 293 (365)
Q Consensus 227 g~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G-~~~~~g~~~~~~~----------- 293 (365)
|. +.++.|++ |..+ ....--+++|..|+......+..++...= ..+.+|.+..+..
T Consensus 181 g~Yd~V~~Yd~--------i~~l---~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~~l~g~~~ 249 (314)
T PF11017_consen 181 GCYDEVLTYDD--------IDSL---DAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEAPADLPGPRP 249 (314)
T ss_pred CCceEEeehhh--------hhhc---cCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCccccCCCCCc
Confidence 96 66666643 3332 13567899999999888888888887653 3555664432211
Q ss_pred --ccchHhhhcCcEEEeecccCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCC
Q 017868 294 --VPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG 356 (365)
Q Consensus 294 --~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 356 (365)
++......+++...|.-.+.+.+.+++.-....... ...+.+.-.. +.+.++++.+.+++
T Consensus 250 ~~FFAp~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~~~-wl~~~~~~G~--ea~~~~y~~l~~G~ 311 (314)
T PF11017_consen 250 EFFFAPDQIDKRIKEWGAAEFFQRMAAAWKRFAADAQP-WLKVEEVAGP--EAVEAAYQDLLAGK 311 (314)
T ss_pred EEEeChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhcC-cEEEEEecCH--HHHHHHHHHHhcCC
Confidence 111112222222222222222223333222222221 2233455566 99999999998774
No 135
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.22 E-value=3.8e-06 Score=75.78 Aligned_cols=108 Identities=24% Similarity=0.310 Sum_probs=80.4
Q ss_pred CceEECCCCCCcchhccchhhHHHHHHHHhcCC----CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHH-H
Q 017868 147 DLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI----GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRL-S 221 (365)
Q Consensus 147 ~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~~~----~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~-~ 221 (365)
+.++++|+.+..+.++...+.++++++++.+.. -++.+|+|.|+|.+|..+++ .++..|...+++++++.++. +
T Consensus 139 ~~a~~~~k~vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~-~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAK-HLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHH-HHHHcCCCEEEEEeCCHHHHHH
Confidence 457888999998888888888888888754332 47899999999999999999 65667877888898888764 6
Q ss_pred HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHHH
Q 017868 222 VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKT 268 (365)
Q Consensus 222 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~ 268 (365)
+++++|+. .+.+ .+ +.+.. ..+|+||.|++.+..
T Consensus 218 la~~~g~~-~~~~----~~----~~~~l----~~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPL----DE----LLELL----NEADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeH----HH----HHHHH----hcCCEEEECCCCCch
Confidence 78889873 2221 11 22221 358999999997644
No 136
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.21 E-value=7.6e-05 Score=65.24 Aligned_cols=131 Identities=22% Similarity=0.320 Sum_probs=83.7
Q ss_pred ceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 137 ~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
+|.+|.. +...++.++++++|..+.-- ........+.. .+.++++||-.|+|. |..++. +++ .|+..+++++.+
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~-tt~~~l~~l~~-~~~~~~~VLDiGcGs-G~l~i~-~~~-~g~~~v~giDis 151 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTHP-TTRLCLEALEK-LVLPGKTVLDVGCGS-GILAIA-AAK-LGAKKVLAVDID 151 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCCH-HHHHHHHHHHh-hcCCCCEEEEeCCcH-HHHHHH-HHH-cCCCeEEEEECC
Confidence 4556544 66788999999888766422 21122223322 256889999999986 877766 554 577679999999
Q ss_pred hhHHHHHHHc----CCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCH---HHHHHHHHhcccCCEEEEEccC
Q 017868 217 DYRLSVAKEI----GADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVGMG 288 (365)
Q Consensus 217 ~~~~~~~~~~----g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~~~~g~~ 288 (365)
+...+.+++. +....+.... ....+|+|+...... ..+..+.++|+++|.+++.+..
T Consensus 152 ~~~l~~A~~n~~~~~~~~~~~~~~---------------~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~ 215 (250)
T PRK00517 152 PQAVEAARENAELNGVELNVYLPQ---------------GDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGIL 215 (250)
T ss_pred HHHHHHHHHHHHHcCCCceEEEcc---------------CCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence 9887766542 2211111000 011599998765432 3455788899999999987643
No 137
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.12 E-value=0.00034 Score=62.60 Aligned_cols=114 Identities=17% Similarity=0.178 Sum_probs=81.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 260 (365)
.+.+++|.|.|.+|..++. .++.+|+ .|.+++++.++.+.++++|+..+ .+ . .+.+. -..+|+||
T Consensus 151 ~g~kvlViG~G~iG~~~a~-~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~----~----~l~~~----l~~aDiVI 215 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLAR-TLKALGA-NVTVGARKSAHLARITEMGLSPF-HL----S----ELAEE----VGKIDIIF 215 (296)
T ss_pred CCCEEEEECCcHHHHHHHH-HHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH----H----HHHHH----hCCCCEEE
Confidence 6899999999999999999 7788999 68888888888888888887532 11 1 12222 24799999
Q ss_pred eCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecc
Q 017868 261 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFR 311 (365)
Q Consensus 261 d~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~ 311 (365)
+++.........+..+++++.++.++.......+ .....++++..+...
T Consensus 216 ~t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~--~~a~~~Gv~~~~~~~ 264 (296)
T PRK08306 216 NTIPALVLTKEVLSKMPPEALIIDLASKPGGTDF--EYAEKRGIKALLAPG 264 (296)
T ss_pred ECCChhhhhHHHHHcCCCCcEEEEEccCCCCcCe--eehhhCCeEEEEECC
Confidence 9987543445677889999999888765544433 233445566665433
No 138
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.10 E-value=6e-05 Score=70.11 Aligned_cols=103 Identities=21% Similarity=0.275 Sum_probs=77.1
Q ss_pred HHHHHHhc-CCC-CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHH
Q 017868 170 GLHACRRA-NIG-PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEK 247 (365)
Q Consensus 170 a~~~~~~~-~~~-~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~ 247 (365)
+|.++.+. ++. .|++|+|.|.|.+|..+++ .++.+|+ +|++++.++.+...+...|+. +. ++ .+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~-~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~-------~l----~e 263 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQ-RLRGLGA-RVIVTEVDPICALQAAMDGFR-VM-------TM----EE 263 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHH-HHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec-------CH----HH
Confidence 45555443 444 8999999999999999999 8899999 688888888877666666654 21 11 22
Q ss_pred HHHHhCCCceEEEeCCCCHHHHH-HHHHhcccCCEEEEEccCCC
Q 017868 248 IQKAMGTGIDVSFDCAGLNKTMS-TALGATCAGGKVCLVGMGHH 290 (365)
Q Consensus 248 ~~~~~~~~~d~vid~~g~~~~~~-~~~~~l~~~G~~~~~g~~~~ 290 (365)
.. .++|+||+++|....+. ..+..+++++.++..|....
T Consensus 264 al----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~ 303 (425)
T PRK05476 264 AA----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN 303 (425)
T ss_pred HH----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence 21 37899999999876666 57888999999998886543
No 139
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.09 E-value=2.1e-07 Score=87.22 Aligned_cols=159 Identities=19% Similarity=0.229 Sum_probs=101.9
Q ss_pred ccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCC
Q 017868 76 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 155 (365)
Q Consensus 76 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 155 (365)
.-|.|+++.+.+|++++.+ +|++-+.. |++|.+|. ..|.+....|. ..++.|++++.++. .+.. -.+
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a~----~~a~~~~~~g~-~l~~lf~~a~~~~k-~vr~-~t~ 155 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNAY----KVAQEEKTVGK-VLERLFQKAFSVGK-RVRT-ETD 155 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHHH----HHHHHcCCchH-HHHHHHHHHHHHhh-hhhh-hcC
Confidence 4688999999999999876 55665555 88888883 33433333332 24578899888775 2221 001
Q ss_pred CCcchhccchhhHHHHHHH----HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE
Q 017868 156 VSLEEGAMCEPLSVGLHAC----RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN 230 (365)
Q Consensus 156 ~~~~~a~~~~~~~~a~~~~----~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~ 230 (365)
++ -.+.+.++.++ +.....++++|+|.|+|.+|..+++ .+...|+..+++++++.++.+ ++++++...
T Consensus 156 i~------~~~vSv~~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~-~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~ 228 (417)
T TIGR01035 156 IS------AGAVSISSAAVELAERIFGSLKGKKALLIGAGEMGELVAK-HLLRKGVGKILIANRTYERAEDLAKELGGEA 228 (417)
T ss_pred CC------CCCcCHHHHHHHHHHHHhCCccCCEEEEECChHHHHHHHH-HHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE
Confidence 11 01222223232 3334467899999999999999999 556689778888888887754 777887642
Q ss_pred EEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHH
Q 017868 231 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK 267 (365)
Q Consensus 231 ~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~ 267 (365)
+.+ .+ +.+. -.++|+||+|++.+.
T Consensus 229 -i~~----~~----l~~~----l~~aDvVi~aT~s~~ 252 (417)
T TIGR01035 229 -VKF----ED----LEEY----LAEADIVISSTGAPH 252 (417)
T ss_pred -eeH----HH----HHHH----HhhCCEEEECCCCCC
Confidence 221 12 2222 146999999998653
No 140
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=97.83 E-value=0.00026 Score=65.48 Aligned_cols=93 Identities=20% Similarity=0.264 Sum_probs=72.3
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868 179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
...|++|+|.|.|.+|..+++ .++.+|+ +|++++.++.+...+...|+. +. +..+.+ .+.|+
T Consensus 192 ~l~Gk~VvViG~G~IG~~vA~-~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~-------~leeal--------~~aDV 253 (406)
T TIGR00936 192 LIAGKTVVVAGYGWCGKGIAM-RARGMGA-RVIVTEVDPIRALEAAMDGFR-VM-------TMEEAA--------KIGDI 253 (406)
T ss_pred CCCcCEEEEECCCHHHHHHHH-HHhhCcC-EEEEEeCChhhHHHHHhcCCE-eC-------CHHHHH--------hcCCE
Confidence 468999999999999999999 8899999 588888888777666666753 21 111111 35799
Q ss_pred EEeCCCCHHHHHH-HHHhcccCCEEEEEccCC
Q 017868 259 SFDCAGLNKTMST-ALGATCAGGKVCLVGMGH 289 (365)
Q Consensus 259 vid~~g~~~~~~~-~~~~l~~~G~~~~~g~~~ 289 (365)
+|+++|....+.. .+..+++++.++..|...
T Consensus 254 VItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 254 FITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred EEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 9999998877764 888999999999887643
No 141
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.78 E-value=0.00028 Score=58.55 Aligned_cols=111 Identities=16% Similarity=0.208 Sum_probs=78.5
Q ss_pred ccchhhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChh----HHHHHHHcCCCEEEeCCC-
Q 017868 162 AMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDY----RLSVAKEIGADNIVKVST- 236 (365)
Q Consensus 162 ~~~~~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~----~~~~~~~~g~~~~~~~~~- 236 (365)
-++....+...+++...+++|++||-+|+|. |..++- +++..+ +|+++++.++ ....++.+|...+.....
T Consensus 53 qtis~P~~vA~m~~~L~~~~g~~VLEIGtGs-GY~aAv-la~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gD 128 (209)
T COG2518 53 QTISAPHMVARMLQLLELKPGDRVLEIGTGS-GYQAAV-LARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGD 128 (209)
T ss_pred ceecCcHHHHHHHHHhCCCCCCeEEEECCCc-hHHHHH-HHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECC
Confidence 3444333444456778899999999999875 877777 887766 7999998876 344567788865543322
Q ss_pred CcccHHHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868 237 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 237 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~ 285 (365)
....|.. ..+||.|+-+.+.+..-...++.|+++|+++.-
T Consensus 129 G~~G~~~---------~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~P 168 (209)
T COG2518 129 GSKGWPE---------EAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIP 168 (209)
T ss_pred cccCCCC---------CCCcCEEEEeeccCCCCHHHHHhcccCCEEEEE
Confidence 2222211 378999998877665667888999999999874
No 142
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.75 E-value=6.9e-05 Score=70.64 Aligned_cols=158 Identities=20% Similarity=0.275 Sum_probs=96.7
Q ss_pred ccCccceEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCCCCCCCCCccccccCCCCcceeeEEeecCCceEECCCC
Q 017868 76 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 155 (365)
Q Consensus 76 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~ 155 (365)
.-|+|+++.+.+|+++..+.-+|+.=+ |++|.. ....|......+. ..++.|++. +++|..
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~qI------lgQvk~----a~~~a~~~g~~g~-~l~~lf~~a--------~~~~k~ 151 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQI------LGQVKD----AYALAQEAGTVGT-ILNRLFQKA--------FSVAKR 151 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChHH------HHHHHH----HHHHHHHcCCchH-HHHHHHHHH--------HHHHhh
Confidence 469999999999999988755555322 233321 0111111111111 122444443 344444
Q ss_pred CCcchhccchhhHHHHHHHHhcC----CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE
Q 017868 156 VSLEEGAMCEPLSVGLHACRRAN----IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN 230 (365)
Q Consensus 156 ~~~~~a~~~~~~~~a~~~~~~~~----~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~ 230 (365)
+..+.+..-.+.++++++++.+. -.++++|+|.|+|.+|.++++ .+...|+..+++++++.++.+ +++.+|..
T Consensus 152 v~~~t~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~-~L~~~G~~~V~v~~r~~~ra~~la~~~g~~- 229 (423)
T PRK00045 152 VRTETGIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAK-HLAEKGVRKITVANRTLERAEELAEEFGGE- 229 (423)
T ss_pred HhhhcCCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHH-HHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-
Confidence 44444433346777777774432 257899999999999999999 666789878888888888755 77888864
Q ss_pred EEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCH
Q 017868 231 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN 266 (365)
Q Consensus 231 ~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~ 266 (365)
++.+ .+ +.+. -.++|+||+|++.+
T Consensus 230 ~~~~----~~----~~~~----l~~aDvVI~aT~s~ 253 (423)
T PRK00045 230 AIPL----DE----LPEA----LAEADIVISSTGAP 253 (423)
T ss_pred EeeH----HH----HHHH----hccCCEEEECCCCC
Confidence 2221 11 1111 14689999999865
No 143
>PLN02494 adenosylhomocysteinase
Probab=97.64 E-value=0.00051 Score=64.26 Aligned_cols=91 Identities=19% Similarity=0.252 Sum_probs=71.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 259 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 259 (365)
-.|++|+|.|.|.+|..+++ .++.+|+ +|++++.++.+...+...|+..+ +..+ .. ...|++
T Consensus 252 LaGKtVvViGyG~IGr~vA~-~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv--------~leE----al----~~ADVV 313 (477)
T PLN02494 252 IAGKVAVICGYGDVGKGCAA-AMKAAGA-RVIVTEIDPICALQALMEGYQVL--------TLED----VV----SEADIF 313 (477)
T ss_pred cCCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEEeCCchhhHHHHhcCCeec--------cHHH----HH----hhCCEE
Confidence 67999999999999999999 8889999 68888888877666666676421 1111 21 357999
Q ss_pred EeCCCCHHHH-HHHHHhcccCCEEEEEccC
Q 017868 260 FDCAGLNKTM-STALGATCAGGKVCLVGMG 288 (365)
Q Consensus 260 id~~g~~~~~-~~~~~~l~~~G~~~~~g~~ 288 (365)
+.++|....+ ...+..+++++.++.+|..
T Consensus 314 I~tTGt~~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 314 VTTTGNKDIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred EECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence 9999977543 6899999999999999864
No 144
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.50 E-value=8.9e-05 Score=72.79 Aligned_cols=80 Identities=23% Similarity=0.405 Sum_probs=55.2
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC---------------------hhHHHHHHHcCCCEEEeCCC
Q 017868 178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD---------------------DYRLSVAKEIGADNIVKVST 236 (365)
Q Consensus 178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~---------------------~~~~~~~~~~g~~~~~~~~~ 236 (365)
..++|++|+|.|+|+.|+++++ .++..|++ |++++.. +.+.+.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~-~l~~~G~~-V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~ 210 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAY-HLRRMGHA-VTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV 210 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHH-HHHHCCCe-EEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 3678999999999999999999 77788995 6667642 34567788899875544211
Q ss_pred CcccHHHHHHHHHHHhCCCceEEEeCCCCH
Q 017868 237 NLQDIAEEVEKIQKAMGTGIDVSFDCAGLN 266 (365)
Q Consensus 237 ~~~~~~~~i~~~~~~~~~~~d~vid~~g~~ 266 (365)
..+.. .... ..++|+||+++|..
T Consensus 211 -~~~~~--~~~~----~~~~D~Vi~AtG~~ 233 (564)
T PRK12771 211 -GEDIT--LEQL----EGEFDAVFVAIGAQ 233 (564)
T ss_pred -CCcCC--HHHH----HhhCCEEEEeeCCC
Confidence 01210 1111 23699999999965
No 145
>PRK08324 short chain dehydrogenase; Validated
Probab=97.43 E-value=0.0022 Score=64.52 Aligned_cols=117 Identities=23% Similarity=0.264 Sum_probs=69.4
Q ss_pred cceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEe
Q 017868 136 GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVD 214 (365)
Q Consensus 136 g~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~ 214 (365)
-++.+|..+++..++.+ +..+.+++..... -..+..+|+++||+|+ |++|.++++ .+...|+ .|+.++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~--------~~~~~l~gk~vLVTGasggIG~~la~-~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM--------PKPKPLAGKVALVTGAAGGIGKATAK-RLAAEGA-CVVLAD 453 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcC--------CCCcCCCCCEEEEecCCCHHHHHHHH-HHHHCcC-EEEEEe
Confidence 44567777777766666 5555555532100 0122346789999986 999999999 5456698 688888
Q ss_pred CChhHHHHH-HHcCC---CEEEeCCC-CcccHHHHHHHHHHHhCCCceEEEeCCC
Q 017868 215 VDDYRLSVA-KEIGA---DNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAG 264 (365)
Q Consensus 215 ~~~~~~~~~-~~~g~---~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~vid~~g 264 (365)
++.++.+.+ +.++. ...+..+- +..+....+.+..+. .+++|++|+++|
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~-~g~iDvvI~~AG 507 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALA-FGGVDIVVSNAG 507 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEEECCC
Confidence 887765543 44443 11222222 222333333333322 358999999998
No 146
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.42 E-value=0.0032 Score=52.88 Aligned_cols=103 Identities=21% Similarity=0.348 Sum_probs=68.9
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHH----HHcC-CCEEEeCCCCcccHHHHHHH
Q 017868 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVA----KEIG-ADNIVKVSTNLQDIAEEVEK 247 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~----~~~g-~~~~~~~~~~~~~~~~~i~~ 247 (365)
+....+.++++||..|+|. |.+++. +++..+ ..++++++.+++..+.+ +.++ ...+..... +..+.+..
T Consensus 33 l~~l~~~~~~~vlDlG~Gt-G~~s~~-~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~---d~~~~l~~ 107 (198)
T PRK00377 33 LSKLRLRKGDMILDIGCGT-GSVTVE-ASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG---EAPEILFT 107 (198)
T ss_pred HHHcCCCCcCEEEEeCCcC-CHHHHH-HHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe---chhhhHhh
Confidence 4567889999999999877 888888 666654 34799999998877654 4466 333322222 22222221
Q ss_pred HHHHhCCCceEEEeCCCC---HHHHHHHHHhcccCCEEEEE
Q 017868 248 IQKAMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 248 ~~~~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~~~~ 285 (365)
....+|.||...+. ...+..+.+.|+++|+++..
T Consensus 108 ----~~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (198)
T PRK00377 108 ----INEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVID 144 (198)
T ss_pred ----cCCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence 13579999985542 34666788899999998864
No 147
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.41 E-value=0.0017 Score=60.06 Aligned_cols=96 Identities=21% Similarity=0.288 Sum_probs=65.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-HcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 259 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 259 (365)
++.+|+|.|+|.+|+.+++ .++.+|+ .|+++++++++.+.+. .++......+. +. +.+.+.. ..+|++
T Consensus 166 ~~~~VlViGaG~vG~~aa~-~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~----~~-~~l~~~l----~~aDvV 234 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAK-MANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYS----NA-YEIEDAV----KRADLL 234 (370)
T ss_pred CCceEEEEcCCHHHHHHHH-HHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccC----CH-HHHHHHH----ccCCEE
Confidence 3456999999999999999 8889999 5888888888877654 45543222211 11 1222221 478999
Q ss_pred EeCCC---C--HH-HHHHHHHhcccCCEEEEEcc
Q 017868 260 FDCAG---L--NK-TMSTALGATCAGGKVCLVGM 287 (365)
Q Consensus 260 id~~g---~--~~-~~~~~~~~l~~~G~~~~~g~ 287 (365)
|++++ . +. .....+..+++++.++.++.
T Consensus 235 I~a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~ 268 (370)
T TIGR00518 235 IGAVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAI 268 (370)
T ss_pred EEccccCCCCCCcCcCHHHHhcCCCCCEEEEEec
Confidence 99973 2 11 12567778899999998874
No 148
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.38 E-value=0.0016 Score=56.54 Aligned_cols=83 Identities=24% Similarity=0.274 Sum_probs=55.2
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCC-----CEEEeCCCCcccHHHHHHHHHHHh
Q 017868 180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGA-----DNIVKVSTNLQDIAEEVEKIQKAM 252 (365)
Q Consensus 180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~-----~~~~~~~~~~~~~~~~i~~~~~~~ 252 (365)
..+.++||+|| +++|...+..++ ..|+ +++.+.++++|.+.+ +++.- ..++..|-.+.+-...+.+.....
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA-~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~ 81 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLA-RRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER 81 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHH-HCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence 46789999998 999999999565 5599 688888999887643 44432 124444433333333444333333
Q ss_pred CCCceEEEeCCC
Q 017868 253 GTGIDVSFDCAG 264 (365)
Q Consensus 253 ~~~~d~vid~~g 264 (365)
+..+|+.++++|
T Consensus 82 ~~~IdvLVNNAG 93 (265)
T COG0300 82 GGPIDVLVNNAG 93 (265)
T ss_pred CCcccEEEECCC
Confidence 468999999998
No 149
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.32 E-value=0.0033 Score=55.93 Aligned_cols=110 Identities=16% Similarity=0.189 Sum_probs=73.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 260 (365)
.|.+++|.|.|.+|.+++. .++.+|+ +|.+.++++++.+.+.+++...+ . + +.+.+. -..+|+|+
T Consensus 150 ~gk~v~IiG~G~iG~avA~-~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~-~~l~~~----l~~aDiVi 214 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIAR-TFSALGA-RVFVGARSSADLARITEMGLIPF-P-------L-NKLEEK----VAEIDIVI 214 (287)
T ss_pred CCCEEEEEcChHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------H-HHHHHH----hccCCEEE
Confidence 5789999999999999999 7788898 67888888877766666665421 1 1 112222 24799999
Q ss_pred eCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEE
Q 017868 261 DCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVV 307 (365)
Q Consensus 261 d~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~ 307 (365)
.++.....-...+..++++..++.++.......+ ...-.+++...
T Consensus 215 nt~P~~ii~~~~l~~~k~~aliIDlas~Pg~tdf--~~Ak~~G~~a~ 259 (287)
T TIGR02853 215 NTIPALVLTADVLSKLPKHAVIIDLASKPGGTDF--EYAKKRGIKAL 259 (287)
T ss_pred ECCChHHhCHHHHhcCCCCeEEEEeCcCCCCCCH--HHHHHCCCEEE
Confidence 9987542223566778887777777665444333 33334444444
No 150
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.30 E-value=0.0011 Score=51.92 Aligned_cols=73 Identities=25% Similarity=0.343 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC--EEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGAD--NIVKVSTNLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~d 257 (365)
++.++||.|+|++|.+++. .+...|++.+..+.++.+|.+ +++.++.. ..+.++ ++. +. -..+|
T Consensus 11 ~~~~vlviGaGg~ar~v~~-~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~----~~~----~~----~~~~D 77 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAA-ALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE----DLE----EA----LQEAD 77 (135)
T ss_dssp TTSEEEEESSSHHHHHHHH-HHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG----GHC----HH----HHTES
T ss_pred CCCEEEEECCHHHHHHHHH-HHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH----HHH----HH----HhhCC
Confidence 5789999999999999999 666779998999999988765 55667433 223322 221 11 14799
Q ss_pred EEEeCCCCH
Q 017868 258 VSFDCAGLN 266 (365)
Q Consensus 258 ~vid~~g~~ 266 (365)
+||.|++..
T Consensus 78 ivI~aT~~~ 86 (135)
T PF01488_consen 78 IVINATPSG 86 (135)
T ss_dssp EEEE-SSTT
T ss_pred eEEEecCCC
Confidence 999998864
No 151
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.29 E-value=0.0049 Score=50.15 Aligned_cols=104 Identities=20% Similarity=0.291 Sum_probs=72.3
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
...++++|+.++=.|+|. |..+++ ++......+++++++++++.+ .+++||.+.+.....+.+++ +..
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE-~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~---L~~--- 99 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIE-WALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEA---LPD--- 99 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHH-HHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHh---hcC---
Confidence 456788999776678864 777788 665545558999999988765 46779988766655443332 221
Q ss_pred HhCCCceEEEeCCC--CHHHHHHHHHhcccCCEEEEEccC
Q 017868 251 AMGTGIDVSFDCAG--LNKTMSTALGATCAGGKVCLVGMG 288 (365)
Q Consensus 251 ~~~~~~d~vid~~g--~~~~~~~~~~~l~~~G~~~~~g~~ 288 (365)
-..+|.+|---| -+..++.++..|+++|+++.....
T Consensus 100 --~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~nait 137 (187)
T COG2242 100 --LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANAIT 137 (187)
T ss_pred --CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEeec
Confidence 126898885322 245777899999999999986543
No 152
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.20 E-value=0.0028 Score=59.62 Aligned_cols=92 Identities=21% Similarity=0.279 Sum_probs=69.9
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868 179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
.-.|++|+|.|.|.+|..+++ .++.+|+ .|++++.++.+...+...|+... ++ .+.. ...|+
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~-rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~--------~l----eell----~~ADI 312 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQ-ALRGFGA-RVVVTEIDPICALQAAMEGYQVV--------TL----EDVV----ETADI 312 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEEeCCchhHHHHHhcCceec--------cH----HHHH----hcCCE
Confidence 458999999999999999999 8889999 68888777766655555565321 12 1221 46899
Q ss_pred EEeCCCCHHHHH-HHHHhcccCCEEEEEccC
Q 017868 259 SFDCAGLNKTMS-TALGATCAGGKVCLVGMG 288 (365)
Q Consensus 259 vid~~g~~~~~~-~~~~~l~~~G~~~~~g~~ 288 (365)
|+.++|....+. ..+..+++++.++.+|..
T Consensus 313 VI~atGt~~iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 313 FVTATGNKDIITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred EEECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence 999999766654 788999999999998754
No 153
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.17 E-value=0.022 Score=50.81 Aligned_cols=96 Identities=20% Similarity=0.279 Sum_probs=62.4
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCE-EEeCCCCcccHHHHHHHHHHHhC
Q 017868 179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI----GADN-IVKVSTNLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~----g~~~-~~~~~~~~~~~~~~i~~~~~~~~ 253 (365)
..++++||-.|+|. |..++. +++ .|+..+++++.++...+.+++. +... +..... + ... ...
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~-aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~---~----~~~---~~~ 223 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIA-ALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI---Y----LEQ---PIE 223 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHH-HHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec---c----ccc---ccC
Confidence 45789999999877 777766 554 5777899999998876665442 3221 111111 1 001 114
Q ss_pred CCceEEEeCCCCH---HHHHHHHHhcccCCEEEEEcc
Q 017868 254 TGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVGM 287 (365)
Q Consensus 254 ~~~d~vid~~g~~---~~~~~~~~~l~~~G~~~~~g~ 287 (365)
.++|+|+...... ..+..+.+.|+++|.+++.+.
T Consensus 224 ~~fDlVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi 260 (288)
T TIGR00406 224 GKADVIVANILAEVIKELYPQFSRLVKPGGWLILSGI 260 (288)
T ss_pred CCceEEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 6899999755432 345567889999999988764
No 154
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.14 E-value=0.0069 Score=54.69 Aligned_cols=102 Identities=23% Similarity=0.301 Sum_probs=70.3
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHH
Q 017868 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKI 248 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~ 248 (365)
++...++++++||..|+| .|..++. +++..+. ..|++++.+++..+.+ ++.|.+.+..... +..+.+..
T Consensus 73 l~~L~i~~g~~VLDIG~G-tG~~a~~-LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g---D~~~~~~~- 146 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGG-TGYNAAV-MSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG---DGYYGVPE- 146 (322)
T ss_pred HHhcCCCCCCEEEEEeCC-ccHHHHH-HHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC---Chhhcccc-
Confidence 455678899999999987 4888888 7777653 3689999998765544 4467654433222 22211111
Q ss_pred HHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868 249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 249 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~ 285 (365)
...+|+|+.+.+........++.|+++|+++..
T Consensus 147 ----~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 147 ----FAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred ----cCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 246999999888665666788999999998763
No 155
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0057 Score=54.32 Aligned_cols=81 Identities=17% Similarity=0.257 Sum_probs=52.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
.+.++||+|+ |++|.++++.+ ...|+ .|+++++++++.+.+...+...+ ..+- +..++...+....+..++.+|+
T Consensus 3 ~~k~vlItGasggiG~~la~~l-~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~-~~Dl~d~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARAL-QSDGW-RVFATCRKEEDVAALEAEGLEAF-QLDYAEPESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHCCceEE-EccCCCHHHHHHHHHHHHHHcCCCccE
Confidence 4578999987 99999999945 45698 57777888877776666554432 2222 2233333444433323467999
Q ss_pred EEeCCC
Q 017868 259 SFDCAG 264 (365)
Q Consensus 259 vid~~g 264 (365)
+|.+.|
T Consensus 80 li~~Ag 85 (277)
T PRK05993 80 LFNNGA 85 (277)
T ss_pred EEECCC
Confidence 999876
No 156
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=97.08 E-value=0.013 Score=51.77 Aligned_cols=136 Identities=18% Similarity=0.187 Sum_probs=79.7
Q ss_pred eeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHH--hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeC
Q 017868 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACR--RANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDV 215 (365)
Q Consensus 138 ~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~--~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~ 215 (365)
|++|..-.....+++.+++.|- .....|...+++ ...+++|.+||=.|+|+ |.+++. .+ .+|+..++++|.
T Consensus 121 w~~~~~~~~~~~i~lDPGlAFG----TG~HpTT~lcL~~Le~~~~~g~~vlDvGcGS-GILaIA-a~-kLGA~~v~g~Di 193 (300)
T COG2264 121 WREYPEPSDELNIELDPGLAFG----TGTHPTTSLCLEALEKLLKKGKTVLDVGCGS-GILAIA-AA-KLGAKKVVGVDI 193 (300)
T ss_pred CccCCCCCCceEEEEccccccC----CCCChhHHHHHHHHHHhhcCCCEEEEecCCh-hHHHHH-HH-HcCCceEEEecC
Confidence 4443322235667777776552 334444444442 13356999998899854 666655 43 559999999999
Q ss_pred ChhHHH----HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCH---HHHHHHHHhcccCCEEEEEccC
Q 017868 216 DDYRLS----VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLN---KTMSTALGATCAGGKVCLVGMG 288 (365)
Q Consensus 216 ~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~---~~~~~~~~~l~~~G~~~~~g~~ 288 (365)
++...+ .++.-+...... ....+..+.+ .++++|+|+-.+=-. .......+.++++|.+++.|..
T Consensus 194 Dp~AV~aa~eNa~~N~v~~~~~--~~~~~~~~~~------~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl 265 (300)
T COG2264 194 DPQAVEAARENARLNGVELLVQ--AKGFLLLEVP------ENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGIL 265 (300)
T ss_pred CHHHHHHHHHHHHHcCCchhhh--cccccchhhc------ccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeeh
Confidence 886544 444444442110 0001111111 146899999765321 3455778899999999988753
No 157
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.07 E-value=0.0065 Score=51.58 Aligned_cols=81 Identities=32% Similarity=0.404 Sum_probs=55.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC----CEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGA----DNIVKVSTNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~----~~~~~~~~~~~~~~~~i~~~~~~~~~ 254 (365)
.++.++|+|| +++|.+.++ .....|+ +++.+.++.++++ ++.+++. ....++ .+..+....+....+. -+
T Consensus 5 ~~kv~lITGASSGiG~A~A~-~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DV-tD~~~~~~~i~~~~~~-~g 80 (246)
T COG4221 5 KGKVALITGASSGIGEATAR-ALAEAGA-KVVLAARREERLEALADEIGAGAALALALDV-TDRAAVEAAIEALPEE-FG 80 (246)
T ss_pred CCcEEEEecCcchHHHHHHH-HHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeecc-CCHHHHHHHHHHHHHh-hC
Confidence 4577899998 999999999 5556699 5777778888876 5577883 222332 2334545555554432 46
Q ss_pred CceEEEeCCCC
Q 017868 255 GIDVSFDCAGL 265 (365)
Q Consensus 255 ~~d~vid~~g~ 265 (365)
.+|+.++..|.
T Consensus 81 ~iDiLvNNAGl 91 (246)
T COG4221 81 RIDILVNNAGL 91 (246)
T ss_pred cccEEEecCCC
Confidence 89999998883
No 158
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.05 E-value=0.023 Score=48.97 Aligned_cols=105 Identities=20% Similarity=0.204 Sum_probs=61.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCCEEEeCCCC-cccHHHHHHHHHHHhCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI---GADNIVKVSTN-LQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~---g~~~~~~~~~~-~~~~~~~i~~~~~~~~~ 254 (365)
.++++||+|+ |.+|..+++ .+...|+ .|+.+++++++.+.+ +++ +....+..+-. .++....+++.... -+
T Consensus 4 ~~~~vlItGa~g~iG~~~a~-~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 80 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAY-FALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKV-LN 80 (238)
T ss_pred CCcEEEEECCCchHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence 4679999987 999999999 5556799 577777777766544 332 22222322221 12222223222221 24
Q ss_pred CceEEEeCCCCH-----------------------HHHHHHHHhcccCCEEEEEccC
Q 017868 255 GIDVSFDCAGLN-----------------------KTMSTALGATCAGGKVCLVGMG 288 (365)
Q Consensus 255 ~~d~vid~~g~~-----------------------~~~~~~~~~l~~~G~~~~~g~~ 288 (365)
++|.++.+.|.. ...+.....+..+|+++.++..
T Consensus 81 ~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 137 (238)
T PRK05786 81 AIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM 137 (238)
T ss_pred CCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 789999888731 0123444556677888888643
No 159
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.94 E-value=0.025 Score=49.55 Aligned_cols=103 Identities=20% Similarity=0.326 Sum_probs=69.9
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCC-EEEeCCCCcccHHHHHHHH
Q 017868 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGAD-NIVKVSTNLQDIAEEVEKI 248 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~i~~~ 248 (365)
+++.++++|+++|=+|+|- |.+++- +|+..|. +|++++-+++..+.+++ .|.. .+-.. ..++ +++
T Consensus 65 ~~kl~L~~G~~lLDiGCGW-G~l~~~-aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~---l~d~----rd~ 134 (283)
T COG2230 65 LEKLGLKPGMTLLDIGCGW-GGLAIY-AAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVR---LQDY----RDF 134 (283)
T ss_pred HHhcCCCCCCEEEEeCCCh-hHHHHH-HHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEE---eccc----ccc
Confidence 3778999999999999865 556666 7778888 79999999988766544 5654 21111 1222 112
Q ss_pred HHHhCCCceEEEe-----CCCC---HHHHHHHHHhcccCCEEEEEccCCC
Q 017868 249 QKAMGTGIDVSFD-----CAGL---NKTMSTALGATCAGGKVCLVGMGHH 290 (365)
Q Consensus 249 ~~~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~~~~g~~~~ 290 (365)
...||-|+. .+|. +.-+..+.++|+++|++.+......
T Consensus 135 ----~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~ 180 (283)
T COG2230 135 ----EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGP 180 (283)
T ss_pred ----ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCC
Confidence 344888864 4443 3455678889999999998875543
No 160
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.92 E-value=0.025 Score=43.18 Aligned_cols=102 Identities=21% Similarity=0.297 Sum_probs=65.7
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
....+.++++||-.|+|. |..+.. +++..+...+++++.++...+.+ +.++...+.....+.... ...
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~-l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~---~~~--- 84 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIE-AARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEA---LED--- 84 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHH-HHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecccccc---Chh---
Confidence 445667788888899866 878888 77766555899999998876654 334443322211111110 111
Q ss_pred HhCCCceEEEeCCCC---HHHHHHHHHhcccCCEEEEE
Q 017868 251 AMGTGIDVSFDCAGL---NKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 251 ~~~~~~d~vid~~g~---~~~~~~~~~~l~~~G~~~~~ 285 (365)
....+|+|+..... ...+..+.+.|+++|.+++.
T Consensus 85 -~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 85 -SLPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred -hcCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 13589999975432 23667899999999998864
No 161
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.84 E-value=0.0045 Score=52.23 Aligned_cols=103 Identities=20% Similarity=0.260 Sum_probs=64.2
Q ss_pred HHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCC-eEEEEeCChhHHH----HHHHcCCCEEEeCCCC-cccHHHHH
Q 017868 172 HACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAP-RIVIVDVDDYRLS----VAKEIGADNIVKVSTN-LQDIAEEV 245 (365)
Q Consensus 172 ~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~-~vi~v~~~~~~~~----~~~~~g~~~~~~~~~~-~~~~~~~i 245 (365)
.+++...+++|++||-.|+|. |..++- +++..|.. .|++++..++-.+ .++.++...+.....+ ...+.
T Consensus 63 ~~l~~L~l~pg~~VLeIGtGs-GY~aAl-la~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~~--- 137 (209)
T PF01135_consen 63 RMLEALDLKPGDRVLEIGTGS-GYQAAL-LAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGWP--- 137 (209)
T ss_dssp HHHHHTTC-TT-EEEEES-TT-SHHHHH-HHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTTG---
T ss_pred HHHHHHhcCCCCEEEEecCCC-cHHHHH-HHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhccc---
Confidence 345777899999999998753 555555 66665643 5889988876443 4555676543322221 11110
Q ss_pred HHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868 246 EKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 246 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~ 285 (365)
...+||.|+-+.+.+..-...++.|+++|+++.-
T Consensus 138 ------~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 138 ------EEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp ------GG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred ------cCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 1368999999877766667888999999999873
No 162
>PRK12742 oxidoreductase; Provisional
Probab=96.79 E-value=0.03 Score=48.24 Aligned_cols=79 Identities=22% Similarity=0.246 Sum_probs=46.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
+++++||+|+ |++|.++++ .+...|+++++...+++++.+ +..+++... +..+- .+.. .+.+..+. .+++|+
T Consensus 5 ~~k~vlItGasggIG~~~a~-~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~-~~~D~--~~~~-~~~~~~~~-~~~id~ 78 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVR-RFVTDGANVRFTYAGSKDAAERLAQETGATA-VQTDS--ADRD-AVIDVVRK-SGALDI 78 (237)
T ss_pred CCCEEEEECCCChHHHHHHH-HHHHCCCEEEEecCCCHHHHHHHHHHhCCeE-EecCC--CCHH-HHHHHHHH-hCCCcE
Confidence 4679999987 999999999 445669854333333444433 445556543 22222 2222 23333222 257999
Q ss_pred EEeCCCC
Q 017868 259 SFDCAGL 265 (365)
Q Consensus 259 vid~~g~ 265 (365)
+|.++|.
T Consensus 79 li~~ag~ 85 (237)
T PRK12742 79 LVVNAGI 85 (237)
T ss_pred EEECCCC
Confidence 9998873
No 163
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.76 E-value=0.032 Score=47.42 Aligned_cols=103 Identities=17% Similarity=0.200 Sum_probs=65.6
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHH----HcCCCEEEeCCCCcccHHHHHHH
Q 017868 173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEK 247 (365)
Q Consensus 173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~i~~ 247 (365)
.+....++++++||-.|+|. |..+.. +++..+. .+|++++.+++-.+.++ ..|...+.....+....
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~-la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~------ 139 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAV-VAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLG------ 139 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC------
Confidence 34566789999999998754 555655 6666553 37999999987766543 34543222111111110
Q ss_pred HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868 248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~ 285 (365)
+. ...++|.|+-...........++.|+++|+++..
T Consensus 140 ~~--~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 140 YE--ENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred CC--cCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 00 1467999976554455666788899999998774
No 164
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=96.76 E-value=0.015 Score=47.89 Aligned_cols=82 Identities=22% Similarity=0.244 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-CEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
.|.+|||+|+ +++|++.++ -...+|- .||.+.+++++.+.+++... -+....+-.+.+-..++-++....--..++
T Consensus 4 tgnTiLITGG~sGIGl~lak-~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv 81 (245)
T COG3967 4 TGNTILITGGASGIGLALAK-RFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNV 81 (245)
T ss_pred cCcEEEEeCCcchhhHHHHH-HHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhe
Confidence 4789999965 999999999 5566787 57788899999888776442 122222222233222333333323456899
Q ss_pred EEeCCC
Q 017868 259 SFDCAG 264 (365)
Q Consensus 259 vid~~g 264 (365)
+++++|
T Consensus 82 liNNAG 87 (245)
T COG3967 82 LINNAG 87 (245)
T ss_pred eeeccc
Confidence 999887
No 165
>PRK14967 putative methyltransferase; Provisional
Probab=96.71 E-value=0.038 Score=47.33 Aligned_cols=99 Identities=26% Similarity=0.331 Sum_probs=63.4
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHH
Q 017868 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQ 249 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~ 249 (365)
+....++++++||-.|+|. |..++. +++. +...+++++.+++..+.+++ .+....+. . .++.+.+
T Consensus 29 l~~~~~~~~~~vLDlGcG~-G~~~~~-la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~-~---~d~~~~~---- 97 (223)
T PRK14967 29 LAAEGLGPGRRVLDLCTGS-GALAVA-AAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVR-R---GDWARAV---- 97 (223)
T ss_pred HHhcccCCCCeEEEecCCH-HHHHHH-HHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEE-E---Cchhhhc----
Confidence 3445678899999999976 887777 6654 66689999999887764433 44432221 1 2222211
Q ss_pred HHhCCCceEEEeCCC---C------------------------HHHHHHHHHhcccCCEEEEE
Q 017868 250 KAMGTGIDVSFDCAG---L------------------------NKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 250 ~~~~~~~d~vid~~g---~------------------------~~~~~~~~~~l~~~G~~~~~ 285 (365)
....+|+|+.... . ...+..+.+.|+++|+++++
T Consensus 98 --~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~ 158 (223)
T PRK14967 98 --EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV 158 (223)
T ss_pred --cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1467999987421 0 11344677899999998875
No 166
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.71 E-value=0.041 Score=45.67 Aligned_cols=81 Identities=16% Similarity=0.219 Sum_probs=53.0
Q ss_pred CCCEEEEEcC--CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEE-EeCCCCcccHHHHHHHHHHHhCCCc
Q 017868 181 PETNVLIMGA--GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNI-VKVSTNLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 181 ~g~~vlI~G~--g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~ 256 (365)
....|||+|+ |++|.+.+. -...-|+ .|+++.++-++...+ .++|...- .+. ++.++..+...+......++.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~-ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV-~~~~~V~~v~~evr~~~~Gkl 82 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAK-EFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDV-SKPEEVVTVSGEVRANPDGKL 82 (289)
T ss_pred CCCeEEEeecCCcchhHHHHH-HHHhCCe-EEEEEccccchHhhHHHhhCCeeEEecc-CChHHHHHHHHHHhhCCCCce
Confidence 4568999974 999998888 4456699 688887877776655 47885332 222 233444443334433346789
Q ss_pred eEEEeCCC
Q 017868 257 DVSFDCAG 264 (365)
Q Consensus 257 d~vid~~g 264 (365)
|+.++.+|
T Consensus 83 d~L~NNAG 90 (289)
T KOG1209|consen 83 DLLYNNAG 90 (289)
T ss_pred EEEEcCCC
Confidence 99999776
No 167
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.67 E-value=0.015 Score=43.59 Aligned_cols=94 Identities=28% Similarity=0.347 Sum_probs=60.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHH-HCCCCeEEEEeCChhHHHHHHHc----CC-CEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPR-AFGAPRIVIVDVDDYRLSVAKEI----GA-DNIVKVSTNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~-~~g~~~vi~v~~~~~~~~~~~~~----g~-~~~~~~~~~~~~~~~~i~~~~~~~~~ 254 (365)
|+.+||-.|+|. |..++. +++ ..++ ++++++.+++..+.+++. +. +.+..... ++ .... ....
T Consensus 1 p~~~vLDlGcG~-G~~~~~-l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~---d~-~~~~----~~~~ 69 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIA-LARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQG---DA-EFDP----DFLE 69 (112)
T ss_dssp TTCEEEEETTTT-SHHHHH-HHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES---CC-HGGT----TTSS
T ss_pred CCCEEEEEcCcC-CHHHHH-HHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC---cc-ccCc----ccCC
Confidence 678999999865 777777 655 4566 799999999887766542 22 22222112 22 1111 1246
Q ss_pred CceEEEeCC-CC---H------HHHHHHHHhcccCCEEEEE
Q 017868 255 GIDVSFDCA-GL---N------KTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 255 ~~d~vid~~-g~---~------~~~~~~~~~l~~~G~~~~~ 285 (365)
++|+|+... .. . ..+..+.+.|+++|++++-
T Consensus 70 ~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 70 PFDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp CEEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 799999866 21 1 2367888999999998763
No 168
>PRK08017 oxidoreductase; Provisional
Probab=96.66 E-value=0.021 Score=49.89 Aligned_cols=79 Identities=19% Similarity=0.300 Sum_probs=50.8
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceEEE
Q 017868 183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVSF 260 (365)
Q Consensus 183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~vi 260 (365)
+++||+|+ |.+|.++++.+ ...|+ .++++.++.++.+.+++.++.... .+- +..++.+.+..+....++.+|.++
T Consensus 3 k~vlVtGasg~IG~~la~~l-~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~-~D~~~~~~~~~~~~~i~~~~~~~~~~ii 79 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALEL-KRRGY-RVLAACRKPDDVARMNSLGFTGIL-LDLDDPESVERAADEVIALTDNRLYGLF 79 (256)
T ss_pred CEEEEECCCChHHHHHHHHH-HHCCC-EEEEEeCCHHHhHHHHhCCCeEEE-eecCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence 47999998 99999999945 45688 577788888888777777754332 221 112222223333222245789988
Q ss_pred eCCC
Q 017868 261 DCAG 264 (365)
Q Consensus 261 d~~g 264 (365)
.+.|
T Consensus 80 ~~ag 83 (256)
T PRK08017 80 NNAG 83 (256)
T ss_pred ECCC
Confidence 8776
No 169
>PRK06182 short chain dehydrogenase; Validated
Probab=96.65 E-value=0.022 Score=50.31 Aligned_cols=81 Identities=23% Similarity=0.254 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE-EeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
++.+++|+|+ |++|..+++.+ ...|+ .|+++.+++++.+.+...++..+ .++ .+.+++...+++..+. .+++|+
T Consensus 2 ~~k~vlItGasggiG~~la~~l-~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv-~~~~~~~~~~~~~~~~-~~~id~ 77 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRL-AAQGY-TVYGAARRVDKMEDLASLGVHPLSLDV-TDEASIKAAVDTIIAE-EGRIDV 77 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeC-CCHHHHHHHHHHHHHh-cCCCCE
Confidence 3578999987 99999999945 45698 57777787777655544454332 222 2233444444444332 458999
Q ss_pred EEeCCCC
Q 017868 259 SFDCAGL 265 (365)
Q Consensus 259 vid~~g~ 265 (365)
+|.+.|.
T Consensus 78 li~~ag~ 84 (273)
T PRK06182 78 LVNNAGY 84 (273)
T ss_pred EEECCCc
Confidence 9998873
No 170
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.64 E-value=0.01 Score=52.84 Aligned_cols=134 Identities=19% Similarity=0.313 Sum_probs=72.7
Q ss_pred ceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHH---HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEE
Q 017868 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHAC---RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIV 213 (365)
Q Consensus 137 ~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~---~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v 213 (365)
.|.+|-.-+....+.+.+++.|-.. ...|...++ +.. .++|++||=.|+|. |.+++. . ..+|++.|+++
T Consensus 119 ~w~~~~~~~~~~~I~idPg~AFGTG----~H~TT~lcl~~l~~~-~~~g~~vLDvG~GS-GILaia-A-~klGA~~v~a~ 190 (295)
T PF06325_consen 119 SWEEYPEPPDEIVIEIDPGMAFGTG----HHPTTRLCLELLEKY-VKPGKRVLDVGCGS-GILAIA-A-AKLGAKKVVAI 190 (295)
T ss_dssp TT----SSTTSEEEEESTTSSS-SS----HCHHHHHHHHHHHHH-SSTTSEEEEES-TT-SHHHHH-H-HHTTBSEEEEE
T ss_pred CCcccCCCCCcEEEEECCCCcccCC----CCHHHHHHHHHHHHh-ccCCCEEEEeCCcH-HHHHHH-H-HHcCCCeEEEe
Confidence 3555522234556777766554333 333433333 332 57889998888743 444443 3 34599999999
Q ss_pred eCChhHHHH----HHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCCCHH---HHHHHHHhcccCCEEEEEc
Q 017868 214 DVDDYRLSV----AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGLNK---TMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 214 ~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g~~~---~~~~~~~~l~~~G~~~~~g 286 (365)
|.++...+. ++.-+....+.... ..+. ...++|+|+-..-..- ......++++++|.+++.|
T Consensus 191 DiDp~Av~~a~~N~~~N~~~~~~~v~~-~~~~----------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSG 259 (295)
T PF06325_consen 191 DIDPLAVEAARENAELNGVEDRIEVSL-SEDL----------VEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSG 259 (295)
T ss_dssp ESSCHHHHHHHHHHHHTT-TTCEEESC-TSCT----------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHcCCCeeEEEEE-eccc----------ccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEcc
Confidence 998865443 33334332221111 1111 1368999998776432 3335566889999999987
Q ss_pred cCC
Q 017868 287 MGH 289 (365)
Q Consensus 287 ~~~ 289 (365)
...
T Consensus 260 Il~ 262 (295)
T PF06325_consen 260 ILE 262 (295)
T ss_dssp EEG
T ss_pred ccH
Confidence 543
No 171
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.023 Score=50.25 Aligned_cols=78 Identities=22% Similarity=0.270 Sum_probs=50.9
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE-EeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868 183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNI-VKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260 (365)
Q Consensus 183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 260 (365)
.++||+|+ |++|..+++.+ ...|+ .|+++++++++.+.+...+.... .++ .+.+++.+.+..+.+. .+++|++|
T Consensus 2 k~vlItGasggiG~~la~~l-~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~~~id~vi 77 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAF-KAAGY-EVWATARKAEDVEALAAAGFTAVQLDV-NDGAALARLAEELEAE-HGGLDVLI 77 (274)
T ss_pred CEEEEecCCChHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeC-CCHHHHHHHHHHHHHh-cCCCCEEE
Confidence 47899987 99999999944 56698 57777787777666555554332 222 2223444444444332 35799999
Q ss_pred eCCC
Q 017868 261 DCAG 264 (365)
Q Consensus 261 d~~g 264 (365)
.+.|
T Consensus 78 ~~ag 81 (274)
T PRK05693 78 NNAG 81 (274)
T ss_pred ECCC
Confidence 9988
No 172
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.58 E-value=0.044 Score=45.53 Aligned_cols=102 Identities=18% Similarity=0.256 Sum_probs=59.3
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868 177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 256 (365)
..+++|++||..|+|.-+. +..+..+..+...+++++.++.+ ...++. .+..+....+....+++.. ...++
T Consensus 28 ~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~~--~~~~~ 99 (188)
T TIGR00438 28 KLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRERV--GDDKV 99 (188)
T ss_pred cccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHHh--CCCCc
Confidence 5678999999999866343 33413333344479999988754 112332 2221221122222333222 25679
Q ss_pred eEEEeC-----CCC------------HHHHHHHHHhcccCCEEEEEc
Q 017868 257 DVSFDC-----AGL------------NKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 257 d~vid~-----~g~------------~~~~~~~~~~l~~~G~~~~~g 286 (365)
|+|+.. .|. ...+..+.++|+++|+++...
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 999952 121 245667889999999998753
No 173
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.53 E-value=0.098 Score=47.61 Aligned_cols=102 Identities=14% Similarity=0.093 Sum_probs=68.2
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc----CCCEEEeCCCCcccHHHHHHHH
Q 017868 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI----GADNIVKVSTNLQDIAEEVEKI 248 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~----g~~~~~~~~~~~~~~~~~i~~~ 248 (365)
.+...-+...+++|.|+|..|.+.+..++...+++.+.+.++++++.+ +++++ +.. +..+ .++.+.+
T Consensus 119 ~~~la~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~----~~~~~~~--- 190 (325)
T PRK08618 119 TKYLAREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVV----NSADEAI--- 190 (325)
T ss_pred HHHhcCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEe----CCHHHHH---
Confidence 344333456789999999999887774556678889999999888765 44433 432 2222 2222222
Q ss_pred HHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC
Q 017868 249 QKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH 290 (365)
Q Consensus 249 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~ 290 (365)
...|+|+.|+.+. ..... ..++++-+++.+|...+
T Consensus 191 -----~~aDiVi~aT~s~-~p~i~-~~l~~G~hV~~iGs~~p 225 (325)
T PRK08618 191 -----EEADIIVTVTNAK-TPVFS-EKLKKGVHINAVGSFMP 225 (325)
T ss_pred -----hcCCEEEEccCCC-CcchH-HhcCCCcEEEecCCCCc
Confidence 4689999999876 33344 88999999988886543
No 174
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=96.53 E-value=0.048 Score=50.76 Aligned_cols=99 Identities=21% Similarity=0.255 Sum_probs=67.6
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~ 254 (365)
+..++++|++||-+|+| .|..+.. +++..|+ .|++++.+++..+.+++......+.+.. .++. ++ .+
T Consensus 161 ~~l~l~~g~rVLDIGcG-~G~~a~~-la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~~----~l----~~ 227 (383)
T PRK11705 161 RKLQLKPGMRVLDIGCG-WGGLARY-AAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDYR----DL----NG 227 (383)
T ss_pred HHhCCCCCCEEEEeCCC-ccHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cchh----hc----CC
Confidence 56788999999999985 3667777 7777788 6999999999988887643211111111 1221 11 35
Q ss_pred CceEEEe-----CCCC---HHHHHHHHHhcccCCEEEEEc
Q 017868 255 GIDVSFD-----CAGL---NKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 255 ~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~~~~g 286 (365)
.+|.|+. .+|. ...+..+.++|+++|.+++..
T Consensus 228 ~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 228 QFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred CCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 7999875 2333 245677888999999998764
No 175
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.52 E-value=0.044 Score=46.68 Aligned_cols=103 Identities=17% Similarity=0.206 Sum_probs=64.3
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHH
Q 017868 173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEK 247 (365)
Q Consensus 173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~ 247 (365)
.++...++++++||-.|+|. |..++. +++..+. ..|++++.+++..+.+ ++++.+.+.....+.. +...
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~-la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~---~~~~- 142 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAV-LAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGT---QGWE- 142 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHH-HHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcc---cCCc-
Confidence 34556789999999998754 555555 6655443 2589999988766554 4455543322211111 1110
Q ss_pred HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868 248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~ 285 (365)
...++|+|+-............+.|+++|+++..
T Consensus 143 ----~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 143 ----PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred ----ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 1357999886544444556788899999998764
No 176
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.51 E-value=0.081 Score=46.55 Aligned_cols=81 Identities=22% Similarity=0.283 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCE-EEeCC---CCcccHHHHHHHHHHH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADN-IVKVS---TNLQDIAEEVEKIQKA 251 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~-~~~~~---~~~~~~~~~i~~~~~~ 251 (365)
.|..|+|+|| +++|.+.+..+++ .|++.+.++ +..++.+ .+++.+... ++.+. .+.++..+.+.....
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~-~G~~l~lva-r~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~- 87 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAK-RGAKLVLVA-RRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR- 87 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHh-CCCceEEee-hhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH-
Confidence 4678999998 8999988875654 499644444 4554443 445555443 33221 223444444433332
Q ss_pred hCCCceEEEeCCC
Q 017868 252 MGTGIDVSFDCAG 264 (365)
Q Consensus 252 ~~~~~d~vid~~g 264 (365)
.-+++|+.++.+|
T Consensus 88 ~fg~vDvLVNNAG 100 (282)
T KOG1205|consen 88 HFGRVDVLVNNAG 100 (282)
T ss_pred hcCCCCEEEecCc
Confidence 2478999999887
No 177
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.46 E-value=0.078 Score=44.76 Aligned_cols=102 Identities=16% Similarity=0.196 Sum_probs=63.5
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHH----HcCCCE-EEeCCCCcccHHHHHHH
Q 017868 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAK----EIGADN-IVKVSTNLQDIAEEVEK 247 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~----~~g~~~-~~~~~~~~~~~~~~i~~ 247 (365)
++...++++++||-.|+|. |..++. +++..+ ...+++++.+++-.+.++ +.+... +.....+.. +.+.
T Consensus 65 ~~~l~~~~~~~VLDiG~Gs-G~~~~~-la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~---~~~~- 138 (205)
T PRK13944 65 CELIEPRPGMKILEVGTGS-GYQAAV-CAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGK---RGLE- 138 (205)
T ss_pred HHhcCCCCCCEEEEECcCc-cHHHHH-HHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcc---cCCc-
Confidence 4566788999999998754 655555 555554 237999999987655443 445431 111111111 1111
Q ss_pred HHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868 248 IQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 248 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~ 285 (365)
....+|.|+-...........++.|+++|+++..
T Consensus 139 ----~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 139 ----KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred ----cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 1358999987655444556788999999998763
No 178
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.43 E-value=0.011 Score=52.29 Aligned_cols=100 Identities=21% Similarity=0.351 Sum_probs=57.9
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHH
Q 017868 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQ 249 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~i~~~~ 249 (365)
++++++++|++||-+|+|- |..++. +++..|+ +|.+++.+++..+.++ +.|....+.+.. .|+. ++
T Consensus 55 ~~~~~l~~G~~vLDiGcGw-G~~~~~-~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~--~D~~----~~- 124 (273)
T PF02353_consen 55 CEKLGLKPGDRVLDIGCGW-GGLAIY-AAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL--QDYR----DL- 124 (273)
T ss_dssp HTTTT--TT-EEEEES-TT-SHHHHH-HHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE--S-GG----G--
T ss_pred HHHhCCCCCCEEEEeCCCc-cHHHHH-HHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--eecc----cc-
Confidence 4678999999999999863 555666 6667799 6899999988877653 456432111101 2221 12
Q ss_pred HHhCCCceEEEe-----CCCC---HHHHHHHHHhcccCCEEEEEc
Q 017868 250 KAMGTGIDVSFD-----CAGL---NKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 250 ~~~~~~~d~vid-----~~g~---~~~~~~~~~~l~~~G~~~~~g 286 (365)
..++|.|+. .+|. +..+..+.+.|+|+|+++...
T Consensus 125 ---~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~ 166 (273)
T PF02353_consen 125 ---PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT 166 (273)
T ss_dssp -----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred ---CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence 248898865 4543 345678889999999997653
No 179
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.044 Score=50.03 Aligned_cols=81 Identities=26% Similarity=0.375 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCEE-EeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADNI-VKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
.++++||+|+ +++|.++++.+ ...|+ +|+.+++++++.+. +++.|.... +..+- +.++..+.+.++.+ ..
T Consensus 6 ~~k~vlITGAs~GIG~aia~~l-a~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~-~~ 82 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAF-ARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS-FG 82 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH-hc
Confidence 4678999987 99999999945 56699 46777787776542 334454321 22221 22233333333322 23
Q ss_pred CCceEEEeCCC
Q 017868 254 TGIDVSFDCAG 264 (365)
Q Consensus 254 ~~~d~vid~~g 264 (365)
+++|++|+++|
T Consensus 83 g~iD~lVnnAG 93 (330)
T PRK06139 83 GRIDVWVNNVG 93 (330)
T ss_pred CCCCEEEECCC
Confidence 67999999987
No 180
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.35 E-value=0.043 Score=50.55 Aligned_cols=97 Identities=15% Similarity=0.202 Sum_probs=58.6
Q ss_pred CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC--CCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868 183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG--ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260 (365)
Q Consensus 183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 260 (365)
.+|||.|+|.+|+.+++.++ +.+...|..++++.++.+.+.... --..+.++- .+.. .+.++. .+.|+||
T Consensus 2 ~~ilviGaG~Vg~~va~~la-~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~--~d~~-al~~li----~~~d~VI 73 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLA-QNGDGEVTIADRSKEKCARIAELIGGKVEALQVDA--ADVD-ALVALI----KDFDLVI 73 (389)
T ss_pred CcEEEECCchhHHHHHHHHH-hCCCceEEEEeCCHHHHHHHHhhccccceeEEecc--cChH-HHHHHH----hcCCEEE
Confidence 47899999999999999445 446457888889988887775553 111222222 1222 222222 3459999
Q ss_pred eCCCCHHHHHHHHHhcccCCEEEEEcc
Q 017868 261 DCAGLNKTMSTALGATCAGGKVCLVGM 287 (365)
Q Consensus 261 d~~g~~~~~~~~~~~l~~~G~~~~~g~ 287 (365)
++....-....+-.++..+=.++..+.
T Consensus 74 n~~p~~~~~~i~ka~i~~gv~yvDts~ 100 (389)
T COG1748 74 NAAPPFVDLTILKACIKTGVDYVDTSY 100 (389)
T ss_pred EeCCchhhHHHHHHHHHhCCCEEEccc
Confidence 998865443333344554545555543
No 181
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.35 E-value=0.039 Score=46.82 Aligned_cols=95 Identities=21% Similarity=0.249 Sum_probs=62.0
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEE--EeCCCCcccHHHHHHHHHHHhCCCce
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNI--VKVSTNLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~d 257 (365)
-+|.+||=.|+|+ |+++.- +| +.|+ .|.++|.+++..+.++.-....- ++|.. ..+.++.. .++.||
T Consensus 58 l~g~~vLDvGCGg-G~Lse~-mA-r~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~------~~~edl~~-~~~~FD 126 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEP-LA-RLGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ------ATVEDLAS-AGGQFD 126 (243)
T ss_pred CCCCeEEEecCCc-cHhhHH-HH-HCCC-eeEEecCChHHHHHHHHhhhhccccccchh------hhHHHHHh-cCCCcc
Confidence 4788999899864 666666 66 4588 79999999999888775332221 23322 12333322 257999
Q ss_pred EEEe-----CCCCH-HHHHHHHHhcccCCEEEEE
Q 017868 258 VSFD-----CAGLN-KTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 258 ~vid-----~~g~~-~~~~~~~~~l~~~G~~~~~ 285 (365)
+|+. .+..+ ..+..+.++++|+|.+...
T Consensus 127 vV~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 127 VVTCMEVLEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred EEEEhhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 9976 33333 3455688899999997764
No 182
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.31 E-value=0.11 Score=49.59 Aligned_cols=80 Identities=24% Similarity=0.311 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh--hH-HHHHHHcCCCEE-EeCCCCcccHHHHHHHHHHHhCCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD--YR-LSVAKEIGADNI-VKVSTNLQDIAEEVEKIQKAMGTG 255 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~--~~-~~~~~~~g~~~~-~~~~~~~~~~~~~i~~~~~~~~~~ 255 (365)
++.++||+|+ |++|..+++.+ ...|++ ++.++++. ++ .+..++++.... .++. +..+....+....+ ..++
T Consensus 209 ~g~~vlItGasggIG~~la~~l-~~~Ga~-vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-~~~~~~~~~~~~~~-~~g~ 284 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVL-ARDGAH-VVCLDVPAAGEALAAVANRVGGTALALDIT-APDAPARIAEHLAE-RHGG 284 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHH-HHCCCE-EEEEeCCccHHHHHHHHHHcCCeEEEEeCC-CHHHHHHHHHHHHH-hCCC
Confidence 5789999987 99999999944 566994 66665532 22 234455665332 2221 22222233333322 2347
Q ss_pred ceEEEeCCC
Q 017868 256 IDVSFDCAG 264 (365)
Q Consensus 256 ~d~vid~~g 264 (365)
+|++|.+.|
T Consensus 285 id~vi~~AG 293 (450)
T PRK08261 285 LDIVVHNAG 293 (450)
T ss_pred CCEEEECCC
Confidence 999999988
No 183
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.055 Score=47.26 Aligned_cols=81 Identities=25% Similarity=0.354 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d 257 (365)
+|+++||+|+ |++|.++++.++ ..|+ .++.+++++.+.+ ..++++.. .+..+- +.+++.+.+.++.+. .+++|
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~-~~G~-~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~-~~~id 81 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLA-AEGA-TVVVGDIDPEAGKAAADEVGGL-FVPTDVTDEDAVNALFDTAAET-YGSVD 81 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHcCCc-EEEeeCCCHHHHHHHHHHHHHH-cCCCC
Confidence 4789999987 999999999554 5698 5677777766554 33455542 222222 222333333333221 35789
Q ss_pred EEEeCCCC
Q 017868 258 VSFDCAGL 265 (365)
Q Consensus 258 ~vid~~g~ 265 (365)
++|.++|.
T Consensus 82 ~vi~~ag~ 89 (255)
T PRK06057 82 IAFNNAGI 89 (255)
T ss_pred EEEECCCc
Confidence 99998873
No 184
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.24 E-value=0.031 Score=52.27 Aligned_cols=93 Identities=22% Similarity=0.268 Sum_probs=55.3
Q ss_pred EEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH-H-cCC-CEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868 185 VLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK-E-IGA-DNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 261 (365)
Q Consensus 185 vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~-~-~g~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 261 (365)
|+|+|+|.+|..++..|++......+++.+++.++.+.+. + .+. ......+- .+..+ +.++. .+.|+||+
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~--~~~~~-l~~~~----~~~dvVin 73 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDV--NDPES-LAELL----RGCDVVIN 73 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--T--TTHHH-HHHHH----TTSSEEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEec--CCHHH-HHHHH----hcCCEEEE
Confidence 6889999999999997766655557888899999876553 3 222 11222222 23222 44443 45699999
Q ss_pred CCCCHHHHHHHHHhcccCCEEEE
Q 017868 262 CAGLNKTMSTALGATCAGGKVCL 284 (365)
Q Consensus 262 ~~g~~~~~~~~~~~l~~~G~~~~ 284 (365)
|+|.......+-.++..+-+++.
T Consensus 74 ~~gp~~~~~v~~~~i~~g~~yvD 96 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAGVHYVD 96 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT-EEEE
T ss_pred CCccchhHHHHHHHHHhCCCeec
Confidence 99965344445556666777776
No 185
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.05 Score=47.04 Aligned_cols=78 Identities=26% Similarity=0.372 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
++.+++|+|+ |.+|..+++ .+...|+ .|+.++++.++.+.+ +..+.. .+..+-. +. +.+.+..+. ..++|+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~-~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~--~~-~~v~~~~~~-~~~~d~ 80 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAV-ALAQRGA-RVVAAARNAAALDRLAGETGCE-PLRLDVG--DD-AAIRAALAA-AGAFDG 80 (245)
T ss_pred CCCEEEEeCCcchHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHHhCCe-EEEecCC--CH-HHHHHHHHH-hCCCCE
Confidence 4679999987 899999999 5556698 577777777665443 444543 2332222 21 233333322 357999
Q ss_pred EEeCCCC
Q 017868 259 SFDCAGL 265 (365)
Q Consensus 259 vid~~g~ 265 (365)
+|.+.|.
T Consensus 81 vi~~ag~ 87 (245)
T PRK07060 81 LVNCAGI 87 (245)
T ss_pred EEECCCC
Confidence 9998873
No 186
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.043 Score=46.95 Aligned_cols=78 Identities=19% Similarity=0.244 Sum_probs=47.5
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcc-cHHHHHHHHHHHhCCCceEEE
Q 017868 183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQ-DIAEEVEKIQKAMGTGIDVSF 260 (365)
Q Consensus 183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~d~vi 260 (365)
.+++|+|+ |++|..++..++ ..|+ .|+++++++++.+.+++++-......+-.+. ++.+.++.+ ...++|++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~~~id~vi 76 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLL-ERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRL---QGQRFDLLF 76 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHH-hCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHh---hcCCCCEEE
Confidence 46899987 999999999565 5598 6777877776665555543322222222222 222222222 235799999
Q ss_pred eCCCC
Q 017868 261 DCAGL 265 (365)
Q Consensus 261 d~~g~ 265 (365)
.++|.
T Consensus 77 ~~ag~ 81 (225)
T PRK08177 77 VNAGI 81 (225)
T ss_pred EcCcc
Confidence 88763
No 187
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.18 E-value=0.09 Score=43.23 Aligned_cols=91 Identities=18% Similarity=0.225 Sum_probs=56.7
Q ss_pred EEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCC
Q 017868 185 VLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 263 (365)
Q Consensus 185 vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~ 263 (365)
|+|.|+ |.+|..+++ .+...|. .|.++.+++++.+. ..++. ++..+- .+. +.+++.. .++|.||.++
T Consensus 1 I~V~GatG~vG~~l~~-~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~--~d~-~~~~~al----~~~d~vi~~~ 68 (183)
T PF13460_consen 1 ILVFGATGFVGRALAK-QLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDL--FDP-DSVKAAL----KGADAVIHAA 68 (183)
T ss_dssp EEEETTTSHHHHHHHH-HHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCT--TCH-HHHHHHH----TTSSEEEECC
T ss_pred eEEECCCChHHHHHHH-HHHHCCC-EEEEEecCchhccc--ccccc-cceeee--hhh-hhhhhhh----hhcchhhhhh
Confidence 789998 999999999 5566687 67777788887666 33333 233222 333 2333322 4899999999
Q ss_pred CC----HHHHHHHHHhcccC--CEEEEEcc
Q 017868 264 GL----NKTMSTALGATCAG--GKVCLVGM 287 (365)
Q Consensus 264 g~----~~~~~~~~~~l~~~--G~~~~~g~ 287 (365)
|. .......++.+... .+++.++.
T Consensus 69 ~~~~~~~~~~~~~~~a~~~~~~~~~v~~s~ 98 (183)
T PF13460_consen 69 GPPPKDVDAAKNIIEAAKKAGVKRVVYLSS 98 (183)
T ss_dssp HSTTTHHHHHHHHHHHHHHTTSSEEEEEEE
T ss_pred hhhcccccccccccccccccccccceeeec
Confidence 83 22344555555443 36666653
No 188
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.16 E-value=0.11 Score=43.81 Aligned_cols=35 Identities=43% Similarity=0.552 Sum_probs=29.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
...+|+|.|+|++|..+++ .+...|...+..+|.+
T Consensus 20 ~~~~VlviG~GglGs~ia~-~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAAL-YLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHH-HHHHcCCCeEEEecCC
Confidence 4468999999999999999 5567799888888766
No 189
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.12 E-value=0.034 Score=44.96 Aligned_cols=81 Identities=23% Similarity=0.330 Sum_probs=50.0
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC--hhHH-HHH---HHcCCCE-EEeCC-CCcccHHHHHHHHHHHhC
Q 017868 183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD--DYRL-SVA---KEIGADN-IVKVS-TNLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~--~~~~-~~~---~~~g~~~-~~~~~-~~~~~~~~~i~~~~~~~~ 253 (365)
+++||+|+ +++|..+++.+++. |..+++.+.++ .++. ++. +..+... .+..+ .+.++....+.++.+ ..
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~-g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARR-GARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIK-RF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHT-TTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHH-HH
T ss_pred CEEEEECCCCHHHHHHHHHHHhc-CceEEEEeeeccccccccccccccccccccccccccccccccccccccccccc-cc
Confidence 36899987 99999999967666 77788888887 3333 232 3344211 22222 222344444444432 25
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
..+|++|.+.|.
T Consensus 79 ~~ld~li~~ag~ 90 (167)
T PF00106_consen 79 GPLDILINNAGI 90 (167)
T ss_dssp SSESEEEEECSC
T ss_pred cccccccccccc
Confidence 689999998883
No 190
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.07 E-value=0.028 Score=52.75 Aligned_cols=74 Identities=16% Similarity=0.236 Sum_probs=52.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
-.+.+|||.|+|.+|.+++. .+...|+..+.++.++.++.+ ++++++....+. +. .+.+. -..+|+
T Consensus 179 l~~kkvlviGaG~~a~~va~-~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-------~~-~l~~~----l~~aDi 245 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFR-HVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-------LS-ELPQL----IKKADI 245 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-------HH-HHHHH----hccCCE
Confidence 46789999999999999999 556779888888888877754 556665222222 11 12221 146999
Q ss_pred EEeCCCCH
Q 017868 259 SFDCAGLN 266 (365)
Q Consensus 259 vid~~g~~ 266 (365)
||.|++.+
T Consensus 246 VI~aT~a~ 253 (414)
T PRK13940 246 IIAAVNVL 253 (414)
T ss_pred EEECcCCC
Confidence 99999975
No 191
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.079 Score=46.23 Aligned_cols=82 Identities=23% Similarity=0.296 Sum_probs=49.8
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CC-CEEEeCCC-CcccHHHHHHHHHHHh
Q 017868 180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI---GA-DNIVKVST-NLQDIAEEVEKIQKAM 252 (365)
Q Consensus 180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~---g~-~~~~~~~~-~~~~~~~~i~~~~~~~ 252 (365)
..+.++||+|+ |.+|.+++..+ ...|+ .|+.+.+++++.+.+ ..+ +. ...+..+- +.+++.+.+++..+ .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l-~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~ 83 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVL-AQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET-E 83 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH-h
Confidence 35789999987 99999999945 45698 577777777765433 222 21 12222222 22333333333322 2
Q ss_pred CCCceEEEeCCC
Q 017868 253 GTGIDVSFDCAG 264 (365)
Q Consensus 253 ~~~~d~vid~~g 264 (365)
.+++|++|.+.|
T Consensus 84 ~~~~d~li~~ag 95 (258)
T PRK06949 84 AGTIDILVNNSG 95 (258)
T ss_pred cCCCCEEEECCC
Confidence 357999999888
No 192
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.03 E-value=0.12 Score=50.19 Aligned_cols=45 Identities=20% Similarity=0.224 Sum_probs=34.3
Q ss_pred HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH
Q 017868 175 RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS 221 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~ 221 (365)
...+.+.|.++||+|+ |.+|..+++.| ...|+ .|+++.++.++.+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~L-Lk~G~-~Vval~Rn~ekl~ 118 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVREL-LKLGF-RVRAGVRSAQRAE 118 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHH-HHCCC-eEEEEeCCHHHHH
Confidence 3456788999999987 99999999944 45698 4666667776654
No 193
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.00 E-value=0.2 Score=41.91 Aligned_cols=105 Identities=13% Similarity=0.255 Sum_probs=60.8
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHH
Q 017868 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQ 249 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~i~~~~ 249 (365)
+....++++++||=.|+|. |..++. +++......+++++.+++..+.++ +++...+..... +..+.+..+
T Consensus 33 ~~~l~~~~~~~VLDiG~G~-G~~~~~-la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~---d~~~~~~~~- 106 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAGT-GTIPVE-AGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG---SAPECLAQL- 106 (196)
T ss_pred HHhcCCCCCCEEEEeCCCC-CHHHHH-HHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC---chHHHHhhC-
Confidence 3556778889988887643 445555 444433347999999988766553 456543322222 222212111
Q ss_pred HHhCCCceEEEeCCCC-HHHHHHHHHhcccCCEEEEEc
Q 017868 250 KAMGTGIDVSFDCAGL-NKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 250 ~~~~~~~d~vid~~g~-~~~~~~~~~~l~~~G~~~~~g 286 (365)
....-.++++.... ...+..+.+.|+++|.++...
T Consensus 107 --~~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 107 --APAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred --CCCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 11222344543222 356778889999999988774
No 194
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.98 E-value=0.077 Score=46.33 Aligned_cols=82 Identities=22% Similarity=0.233 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
.+.++||+|+ +++|.++++.++ ..|+++++...++++..+.++..+... +..+- +.++..+.++++.+. .+++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~-~~G~~v~~~~~~~~~~~~~l~~~~~~~-~~~Dl~~~~~~~~~~~~~~~~-~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFL-REGAKVAVLYNSAENEAKELREKGVFT-IKCDVGNRDQVKKSKEVVEKE-FGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCcHHHHHHHHhCCCeE-EEecCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 4678999987 999999999554 569854444344444444444434322 22222 223333444443332 357999
Q ss_pred EEeCCCC
Q 017868 259 SFDCAGL 265 (365)
Q Consensus 259 vid~~g~ 265 (365)
+|.+.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998873
No 195
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.98 E-value=0.26 Score=41.51 Aligned_cols=91 Identities=16% Similarity=0.133 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD-YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 259 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 259 (365)
.|.+|||.|+|.+|..-+. .+...|+. |.+++... +..+.+.+.|--..+ .. ++... . -.++++|
T Consensus 8 ~gk~vlVvGgG~va~rk~~-~Ll~~ga~-VtVvsp~~~~~l~~l~~~~~i~~~---~~--~~~~~--d-----l~~~~lV 73 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKAR-LLLKAGAQ-LRVIAEELESELTLLAEQGGITWL---AR--CFDAD--I-----LEGAFLV 73 (205)
T ss_pred CCCeEEEECcCHHHHHHHH-HHHHCCCE-EEEEcCCCCHHHHHHHHcCCEEEE---eC--CCCHH--H-----hCCcEEE
Confidence 4679999999999999999 55567984 55654432 222222232311111 11 11111 1 2579999
Q ss_pred EeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868 260 FDCAGLNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 260 id~~g~~~~~~~~~~~l~~~G~~~~~ 285 (365)
|-+++.+..-..........|..+..
T Consensus 74 i~at~d~~ln~~i~~~a~~~~ilvn~ 99 (205)
T TIGR01470 74 IAATDDEELNRRVAHAARARGVPVNV 99 (205)
T ss_pred EECCCCHHHHHHHHHHHHHcCCEEEE
Confidence 99999875544555555566766654
No 196
>PRK07825 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.073 Score=47.01 Aligned_cols=80 Identities=29% Similarity=0.304 Sum_probs=50.0
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
+.++||+|+ |++|..+++.++ ..|+ .++.+++++++.+. .+.++....+..+- +.+++...+..+.+. .+++|+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~-~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 81 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALA-ALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEAD-LGPIDV 81 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 578999987 999999999555 5698 46677777776543 34454222222222 223443444444332 357999
Q ss_pred EEeCCC
Q 017868 259 SFDCAG 264 (365)
Q Consensus 259 vid~~g 264 (365)
+|.+.|
T Consensus 82 li~~ag 87 (273)
T PRK07825 82 LVNNAG 87 (273)
T ss_pred EEECCC
Confidence 999887
No 197
>PRK07814 short chain dehydrogenase; Provisional
Probab=95.95 E-value=0.096 Score=45.99 Aligned_cols=81 Identities=19% Similarity=0.271 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEeCCCCc-ccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVSTNL-QDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~---g~~-~~~~~~~~~-~~~~~~i~~~~~~~~ 253 (365)
++.++||+|+ |++|.++++.+ ...|+ .|+.+++++++.+.+ +.+ +.. ..+..+-.+ +++...+.+..+. -
T Consensus 9 ~~~~vlItGasggIG~~~a~~l-~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 85 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAF-AEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA-F 85 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence 4689999987 89999999955 45699 677777777654432 222 322 122222222 2222233333222 2
Q ss_pred CCceEEEeCCC
Q 017868 254 TGIDVSFDCAG 264 (365)
Q Consensus 254 ~~~d~vid~~g 264 (365)
+++|++|.++|
T Consensus 86 ~~id~vi~~Ag 96 (263)
T PRK07814 86 GRLDIVVNNVG 96 (263)
T ss_pred CCCCEEEECCC
Confidence 57999999887
No 198
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=95.94 E-value=0.055 Score=44.53 Aligned_cols=89 Identities=22% Similarity=0.200 Sum_probs=58.9
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 259 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 259 (365)
-.|.+|.|+|.|.+|+.+++ .++.+|+ +|++.+++..........+... .++.+.+ ...|+|
T Consensus 34 l~g~tvgIiG~G~IG~~vA~-~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~--------~~l~ell--------~~aDiv 95 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVAR-RLKAFGM-RVIGYDRSPKPEEGADEFGVEY--------VSLDELL--------AQADIV 95 (178)
T ss_dssp STTSEEEEESTSHHHHHHHH-HHHHTT--EEEEEESSCHHHHHHHHTTEEE--------SSHHHHH--------HH-SEE
T ss_pred cCCCEEEEEEEcCCcCeEee-eeecCCc-eeEEecccCChhhhccccccee--------eehhhhc--------chhhhh
Confidence 36899999999999999999 8899999 7888888877666455555421 1332222 247888
Q ss_pred EeCCCCHH-----HHHHHHHhcccCCEEEEEc
Q 017868 260 FDCAGLNK-----TMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 260 id~~g~~~-----~~~~~~~~l~~~G~~~~~g 286 (365)
+.+..... .-...+..++++..++.++
T Consensus 96 ~~~~plt~~T~~li~~~~l~~mk~ga~lvN~a 127 (178)
T PF02826_consen 96 SLHLPLTPETRGLINAEFLAKMKPGAVLVNVA 127 (178)
T ss_dssp EE-SSSSTTTTTSBSHHHHHTSTTTEEEEESS
T ss_pred hhhhccccccceeeeeeeeeccccceEEEecc
Confidence 87665211 1125677788777777664
No 199
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.94 E-value=0.034 Score=49.48 Aligned_cols=76 Identities=16% Similarity=0.171 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVSTNLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
++.++||.|+|+.+.+++. .+...|++.+.++.++.+|.+ ++++++... +..+. .+ +.+... -..+|+
T Consensus 124 ~~k~vlvlGaGGaarai~~-aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~----~~-~~~~~~----~~~~Di 193 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVY-ALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE----GD-SGGLAI----EKAAEV 193 (282)
T ss_pred CCceEEEEcCcHHHHHHHH-HHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc----ch-hhhhhc----ccCCCE
Confidence 5789999999999999999 666789988999999888765 445554211 11110 00 111111 246899
Q ss_pred EEeCCCCH
Q 017868 259 SFDCAGLN 266 (365)
Q Consensus 259 vid~~g~~ 266 (365)
||+|+...
T Consensus 194 VInaTp~g 201 (282)
T TIGR01809 194 LVSTVPAD 201 (282)
T ss_pred EEECCCCC
Confidence 99998753
No 200
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.11 Score=46.45 Aligned_cols=82 Identities=24% Similarity=0.333 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K---EIGADN-IVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~---~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
.+.++||+|+ |++|.++++.++ ..|+ .|+.++++.++.+.+ + ..+... .+..+- +.+++.+.++.+.+. -
T Consensus 39 ~~k~vlItGasggIG~~la~~La-~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~ 115 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFA-RRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR-I 115 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence 4578999987 999999999555 5588 577777877665432 2 223321 222222 222333333333322 3
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|++|.++|.
T Consensus 116 g~id~li~~AG~ 127 (293)
T PRK05866 116 GGVDILINNAGR 127 (293)
T ss_pred CCCCEEEECCCC
Confidence 579999999873
No 201
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.92 E-value=0.11 Score=45.61 Aligned_cols=81 Identities=22% Similarity=0.390 Sum_probs=51.8
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh----HHHHHHHcCCC--EEEeCCCCcccHHHHHHHHHHHh
Q 017868 180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY----RLSVAKEIGAD--NIVKVSTNLQDIAEEVEKIQKAM 252 (365)
Q Consensus 180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~----~~~~~~~~g~~--~~~~~~~~~~~~~~~i~~~~~~~ 252 (365)
-+|+.|||+|+ +++|.+.++-+|++ |+ +++..|.+.+ ..+..++.|-. ...+. ++.++.....++..+.
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~r-g~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdi-s~~eei~~~a~~Vk~e- 111 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKR-GA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDI-SDREEIYRLAKKVKKE- 111 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHh-CC-eEEEEeccccchHHHHHHHHhcCceeEEEecC-CCHHHHHHHHHHHHHh-
Confidence 47899999987 89999888857755 88 5666666653 33444444422 22333 2344555544444443
Q ss_pred CCCceEEEeCCC
Q 017868 253 GTGIDVSFDCAG 264 (365)
Q Consensus 253 ~~~~d~vid~~g 264 (365)
-+.+|++++.+|
T Consensus 112 ~G~V~ILVNNAG 123 (300)
T KOG1201|consen 112 VGDVDILVNNAG 123 (300)
T ss_pred cCCceEEEeccc
Confidence 459999999888
No 202
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.91 E-value=0.11 Score=46.64 Aligned_cols=103 Identities=15% Similarity=0.125 Sum_probs=67.5
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEeCCCCcccHHHHHHHHHHH
Q 017868 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~-~~~~~~~~~~~~~~i~~~~~~ 251 (365)
.+...-....+++|.|+|..|.+.+..++...+.+.+.+.+++.++.+ +++++.... .+.. .+..+.+
T Consensus 117 ~~~La~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~----~~~~~av------ 186 (304)
T PRK07340 117 ARTLAPAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEP----LDGEAIP------ 186 (304)
T ss_pred HHHhCCCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEE----CCHHHHh------
Confidence 343333456789999999999999995656678888889888887755 455553211 0101 1222222
Q ss_pred hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC
Q 017868 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH 290 (365)
Q Consensus 252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~ 290 (365)
..+|+|+.|+.+...+-.. .++++-++..+|...+
T Consensus 187 --~~aDiVitaT~s~~Pl~~~--~~~~g~hi~~iGs~~p 221 (304)
T PRK07340 187 --EAVDLVVTATTSRTPVYPE--AARAGRLVVAVGAFTP 221 (304)
T ss_pred --hcCCEEEEccCCCCceeCc--cCCCCCEEEecCCCCC
Confidence 4799999998865433333 3788888888886544
No 203
>PRK12828 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.087 Score=45.24 Aligned_cols=80 Identities=19% Similarity=0.185 Sum_probs=46.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHH-HHHHH---cCCCEEEeCCC-CcccHHHHHHHHHHHhCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRL-SVAKE---IGADNIVKVST-NLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~-~~~~~---~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~ 254 (365)
++.++||+|+ |.+|..+++.++ ..|++ |+.++++.++. +.+++ .+... +..+- +.+++...++++.+. -+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~-~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~-~~ 81 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLA-ARGAR-VALIGRGAAPLSQTLPGVPADALRI-GGIDLVDPQAARRAVDEVNRQ-FG 81 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHH-HCCCe-EEEEeCChHhHHHHHHHHhhcCceE-EEeecCCHHHHHHHHHHHHHH-hC
Confidence 3679999987 999999999555 45984 77777765542 22222 23322 11211 223333333333332 24
Q ss_pred CceEEEeCCC
Q 017868 255 GIDVSFDCAG 264 (365)
Q Consensus 255 ~~d~vid~~g 264 (365)
++|++|.+.|
T Consensus 82 ~~d~vi~~ag 91 (239)
T PRK12828 82 RLDALVNIAG 91 (239)
T ss_pred CcCEEEECCc
Confidence 7999999876
No 204
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.89 E-value=0.12 Score=46.64 Aligned_cols=90 Identities=27% Similarity=0.304 Sum_probs=57.9
Q ss_pred CEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868 183 TNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 261 (365)
Q Consensus 183 ~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 261 (365)
.+|.|+|+|.+|...+. .++..|. ..|++.++++++.+.+++.|...... .+..+. -...|+||.
T Consensus 7 ~~I~IIG~G~mG~sla~-~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~~--------~~~aDvVii 72 (307)
T PRK07502 7 DRVALIGIGLIGSSLAR-AIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAEA--------VKGADLVIL 72 (307)
T ss_pred cEEEEEeeCHHHHHHHH-HHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHHH--------hcCCCEEEE
Confidence 57999999999998888 5556674 36888899988888888887532111 111111 146899999
Q ss_pred CCCCHHH---HHHHHHhcccCCEEEEEc
Q 017868 262 CAGLNKT---MSTALGATCAGGKVCLVG 286 (365)
Q Consensus 262 ~~g~~~~---~~~~~~~l~~~G~~~~~g 286 (365)
|+..... +......++++..++.++
T Consensus 73 avp~~~~~~v~~~l~~~l~~~~iv~dvg 100 (307)
T PRK07502 73 CVPVGASGAVAAEIAPHLKPGAIVTDVG 100 (307)
T ss_pred CCCHHHHHHHHHHHHhhCCCCCEEEeCc
Confidence 8875422 222334456666555554
No 205
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.86 E-value=0.11 Score=45.62 Aligned_cols=81 Identities=15% Similarity=0.211 Sum_probs=47.6
Q ss_pred CCCEEEEEcCC---HHHHHHHHHHHHHCCCCeEEEEeCChhHH----HHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHh
Q 017868 181 PETNVLIMGAG---PIGLVTMLGAPRAFGAPRIVIVDVDDYRL----SVAKEIGADNIVKVST-NLQDIAEEVEKIQKAM 252 (365)
Q Consensus 181 ~g~~vlI~G~g---~~G~~ai~~l~~~~g~~~vi~v~~~~~~~----~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~ 252 (365)
+|.++||+|++ ++|.++++.++ ..|++ |+.++++++.. ++.++++....+..+- +.++....+.+..+.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la-~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~- 85 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFR-ALGAE-LAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE- 85 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHH-HcCCE-EEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH-
Confidence 46789999863 89999999555 56995 55566654332 2334444333333322 223344444444332
Q ss_pred CCCceEEEeCCC
Q 017868 253 GTGIDVSFDCAG 264 (365)
Q Consensus 253 ~~~~d~vid~~g 264 (365)
-+.+|+++.++|
T Consensus 86 ~g~ld~lv~nAg 97 (258)
T PRK07533 86 WGRLDFLLHSIA 97 (258)
T ss_pred cCCCCEEEEcCc
Confidence 257999999886
No 206
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.84 E-value=0.11 Score=44.60 Aligned_cols=82 Identities=16% Similarity=0.212 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCE-EEeCC-CCcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVS-TNLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~-~~~~~-~~~~~~~~~i~~~~~~~~ 253 (365)
+|.++||.|+ +++|.+.+..++ ..|+ +|+.+.+++++.+. +++.+... .+..+ .+.++..+.+.+..+..+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la-~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFA-RLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN 81 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHH-HCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4678999987 899999999555 5699 46777777765432 23334332 12211 233344444454444334
Q ss_pred CCceEEEeCCC
Q 017868 254 TGIDVSFDCAG 264 (365)
Q Consensus 254 ~~~d~vid~~g 264 (365)
..+|++|.+.|
T Consensus 82 ~~iD~li~nag 92 (227)
T PRK08862 82 RAPDVLVNNWT 92 (227)
T ss_pred CCCCEEEECCc
Confidence 47999999886
No 207
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=95.83 E-value=0.12 Score=45.30 Aligned_cols=81 Identities=22% Similarity=0.254 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~ 256 (365)
++.++||+|+ +++|.++++.++ ..|+ .|+.+++++++.+.+ ++++.. ..+..+- +..+....+++..+. -+.+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~i 81 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFL-AEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDA-FGKL 81 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHh-cCCC
Confidence 4678999987 999999999454 6699 577777877766544 344421 1222221 223333444444332 3579
Q ss_pred eEEEeCCC
Q 017868 257 DVSFDCAG 264 (365)
Q Consensus 257 d~vid~~g 264 (365)
|++|.++|
T Consensus 82 d~li~~ag 89 (263)
T PRK06200 82 DCFVGNAG 89 (263)
T ss_pred CEEEECCC
Confidence 99999887
No 208
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.081 Score=46.23 Aligned_cols=84 Identities=21% Similarity=0.380 Sum_probs=49.3
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH-HH-HH---HHcCCC--EEEeCCC-CcccHHHHHHHHH
Q 017868 179 IGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR-LS-VA---KEIGAD--NIVKVST-NLQDIAEEVEKIQ 249 (365)
Q Consensus 179 ~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~-~~-~~---~~~g~~--~~~~~~~-~~~~~~~~i~~~~ 249 (365)
+..+.++||+|+ +++|.++++.+++.-|+ +|+.+.+++++ .+ .. ++.+.. ..+..+- +..+..+.+++..
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 456789999987 99999999856655357 56666666553 22 22 333321 2232222 2233333444444
Q ss_pred HHhCCCceEEEeCCCC
Q 017868 250 KAMGTGIDVSFDCAGL 265 (365)
Q Consensus 250 ~~~~~~~d~vid~~g~ 265 (365)
+ .+++|+++.+.|.
T Consensus 84 ~--~g~id~li~~ag~ 97 (253)
T PRK07904 84 A--GGDVDVAIVAFGL 97 (253)
T ss_pred h--cCCCCEEEEeeec
Confidence 3 2589999887763
No 209
>PRK06196 oxidoreductase; Provisional
Probab=95.79 E-value=0.088 Score=47.68 Aligned_cols=81 Identities=19% Similarity=0.286 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d 257 (365)
.+.++||+|+ |++|.+++..++ ..|+ .|+.+.++.++.+. +.++.....+..+- +..+....+.++.+ ..+++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~-~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~-~~~~iD 101 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALA-QAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLD-SGRRID 101 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHh-cCCCCC
Confidence 4678999987 999999999454 5698 46667777665543 33332122222222 22233333333322 135799
Q ss_pred EEEeCCC
Q 017868 258 VSFDCAG 264 (365)
Q Consensus 258 ~vid~~g 264 (365)
++|.++|
T Consensus 102 ~li~nAg 108 (315)
T PRK06196 102 ILINNAG 108 (315)
T ss_pred EEEECCC
Confidence 9999887
No 210
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.78 E-value=0.11 Score=45.86 Aligned_cols=81 Identities=19% Similarity=0.249 Sum_probs=47.8
Q ss_pred CCCEEEEEcCC---HHHHHHHHHHHHHCCCCeEEEEeCChhHH----HHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHh
Q 017868 181 PETNVLIMGAG---PIGLVTMLGAPRAFGAPRIVIVDVDDYRL----SVAKEIGADNIVKVST-NLQDIAEEVEKIQKAM 252 (365)
Q Consensus 181 ~g~~vlI~G~g---~~G~~ai~~l~~~~g~~~vi~v~~~~~~~----~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~ 252 (365)
++.++||+|++ ++|.++++.++ ..|++ |+.+.++++.. ++.+++|....+..+- +.++....+++..+.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la-~~Ga~-V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~- 82 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLA-AQGAE-LAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKK- 82 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHH-hCCCE-EEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHH-
Confidence 46789999874 89999999555 56994 55565554322 2234445433222222 223344444444332
Q ss_pred CCCceEEEeCCC
Q 017868 253 GTGIDVSFDCAG 264 (365)
Q Consensus 253 ~~~~d~vid~~g 264 (365)
-+.+|++++++|
T Consensus 83 ~g~iD~lVnnAG 94 (271)
T PRK06505 83 WGKLDFVVHAIG 94 (271)
T ss_pred hCCCCEEEECCc
Confidence 358999999887
No 211
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=95.77 E-value=0.11 Score=43.19 Aligned_cols=97 Identities=20% Similarity=0.243 Sum_probs=59.9
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868 178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~ 253 (365)
.++++.+||-.|+|. |..++. +++......|++++.+++..+.+ ++.+.+.+..... +.. +... .
T Consensus 42 ~l~~g~~VLDiGcGt-G~~al~-la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~---d~~----~~~~--~ 110 (187)
T PRK00107 42 YLPGGERVLDVGSGA-GFPGIP-LAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHG---RAE----EFGQ--E 110 (187)
T ss_pred hcCCCCeEEEEcCCC-CHHHHH-HHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEec---cHh----hCCC--C
Confidence 345688999988754 554555 44444444799999998766544 4455543222222 111 1111 3
Q ss_pred CCceEEEeCCC--CHHHHHHHHHhcccCCEEEEE
Q 017868 254 TGIDVSFDCAG--LNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 254 ~~~d~vid~~g--~~~~~~~~~~~l~~~G~~~~~ 285 (365)
..+|+|+.... -...+..+.+.|+++|+++.+
T Consensus 111 ~~fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~ 144 (187)
T PRK00107 111 EKFDVVTSRAVASLSDLVELCLPLLKPGGRFLAL 144 (187)
T ss_pred CCccEEEEccccCHHHHHHHHHHhcCCCeEEEEE
Confidence 57999997432 234666788999999999877
No 212
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=95.75 E-value=0.099 Score=45.86 Aligned_cols=81 Identities=26% Similarity=0.233 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~ 256 (365)
++.++||+|+ +++|.++++.+ ...|+ +|+.++++.++.+.+.+ .+.. ..+..+- +..+..+.++++.+. -+.+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l-~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~i 80 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRF-VAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAA-FGKI 80 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHH-hCCC
Confidence 4678999987 89999999945 45699 57777777766554433 3321 1121111 122333344443332 2578
Q ss_pred eEEEeCCC
Q 017868 257 DVSFDCAG 264 (365)
Q Consensus 257 d~vid~~g 264 (365)
|++|.+.|
T Consensus 81 d~li~~Ag 88 (262)
T TIGR03325 81 DCLIPNAG 88 (262)
T ss_pred CEEEECCC
Confidence 99999886
No 213
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.73 E-value=0.16 Score=43.98 Aligned_cols=81 Identities=16% Similarity=0.260 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVSTN-LQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~ 253 (365)
++.++||+|+ |++|+.+++ .+...|+ .|+.+++++++.+.+ +..+... .+..+-. ..+..+.++.+.+. .
T Consensus 4 ~~~~~lItG~~g~iG~~~a~-~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 80 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAE-YLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED-F 80 (253)
T ss_pred CCCEEEEECCCchHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 4679999987 999999999 4455698 577777776654322 2334321 2222221 12333333333222 2
Q ss_pred CCceEEEeCCC
Q 017868 254 TGIDVSFDCAG 264 (365)
Q Consensus 254 ~~~d~vid~~g 264 (365)
+++|.+|.++|
T Consensus 81 ~~id~vi~~ag 91 (253)
T PRK08217 81 GQLNGLINNAG 91 (253)
T ss_pred CCCCEEEECCC
Confidence 57899999887
No 214
>PRK05872 short chain dehydrogenase; Provisional
Probab=95.70 E-value=0.1 Score=46.74 Aligned_cols=82 Identities=29% Similarity=0.450 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC-EEEe--CC-CCcccHHHHHHHHHHHhCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGAD-NIVK--VS-TNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~-~~~~--~~-~~~~~~~~~i~~~~~~~~~ 254 (365)
.+.++||+|+ +++|.++++ .+...|+ .|+.+.+++++.+ +.++++.. .++. .+ .+.++....+.++.+. .+
T Consensus 8 ~gk~vlItGas~gIG~~ia~-~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELAR-RLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVER-FG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHH-cC
Confidence 5789999987 999999999 4456698 5777777777654 44556521 1111 11 1223333444444332 25
Q ss_pred CceEEEeCCCC
Q 017868 255 GIDVSFDCAGL 265 (365)
Q Consensus 255 ~~d~vid~~g~ 265 (365)
++|++|.+.|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 79999999884
No 215
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.13 Score=44.84 Aligned_cols=80 Identities=25% Similarity=0.284 Sum_probs=47.9
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCC-EEEeCCC-CcccHHHHHHHHHHHhCC
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K---EIGAD-NIVKVST-NLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~---~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~ 254 (365)
|.++||+|+ +++|.++++.+ ...|+ .|+.+++++++.+.+ + +.+.. ..+..+- +.+++...+.++.+. -+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l-~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 77 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRF-AEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEK-FG 77 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hC
Confidence 468999987 99999999955 45699 677777776654432 2 22221 1222222 223333334443332 25
Q ss_pred CceEEEeCCC
Q 017868 255 GIDVSFDCAG 264 (365)
Q Consensus 255 ~~d~vid~~g 264 (365)
++|++|.+.|
T Consensus 78 ~id~lI~~ag 87 (252)
T PRK07677 78 RIDALINNAA 87 (252)
T ss_pred CccEEEECCC
Confidence 7999999887
No 216
>PRK06841 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.15 Score=44.47 Aligned_cols=82 Identities=22% Similarity=0.252 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE--EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADN--IVKVST-NLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~--~~~~~~-~~~~~~~~i~~~~~~~~~~~ 256 (365)
.+.++||+|+ |.+|..+++.++ ..|+ .|+.+.++++..+...++.... .+..+- +.+++...+.++.+. ..++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~-~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~ 90 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFA-AKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISA-FGRI 90 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCC
Confidence 4679999987 999999999554 5698 5777777776655555443221 222222 222333333333322 2579
Q ss_pred eEEEeCCCC
Q 017868 257 DVSFDCAGL 265 (365)
Q Consensus 257 d~vid~~g~ 265 (365)
|++|.++|.
T Consensus 91 d~vi~~ag~ 99 (255)
T PRK06841 91 DILVNSAGV 99 (255)
T ss_pred CEEEECCCC
Confidence 999998873
No 217
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.66 E-value=0.13 Score=44.30 Aligned_cols=80 Identities=19% Similarity=0.284 Sum_probs=47.6
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH-HHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR-LSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~-~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
+.++||+|+ +++|.++++.+ ...|+ +|+.++++++. .+.+++.++. .+..+- +.++....+.+..+. -+++|+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l-~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 77 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHL-LAQGQ-PVIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQH-TDGLRA 77 (236)
T ss_pred CceEEEECCCChHHHHHHHHH-HHCCC-eEEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHhh-CCCccE
Confidence 468999987 99999999945 45699 46666665433 3444555543 222222 223333344443322 247999
Q ss_pred EEeCCCC
Q 017868 259 SFDCAGL 265 (365)
Q Consensus 259 vid~~g~ 265 (365)
++.+.|.
T Consensus 78 lv~~ag~ 84 (236)
T PRK06483 78 IIHNASD 84 (236)
T ss_pred EEECCcc
Confidence 9998873
No 218
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.63 E-value=0.071 Score=45.79 Aligned_cols=34 Identities=21% Similarity=0.427 Sum_probs=28.1
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
..+|+|.|+|++|..++..| -+.|...+..+|.+
T Consensus 11 ~~~VlVvG~GGvGs~va~~L-ar~GVg~i~LvD~D 44 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEAL-ARSGVGKLTLIDFD 44 (231)
T ss_pred CCCEEEECCCHHHHHHHHHH-HHcCCCEEEEECCC
Confidence 35899999999999999945 56699888888754
No 219
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.62 E-value=0.19 Score=43.52 Aligned_cols=82 Identities=20% Similarity=0.236 Sum_probs=48.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY--RLSVAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG 255 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~--~~~~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~ 255 (365)
.+.++||+|+ |++|.+++..++ ..|+ .|+.+++++. ..+.+++++.. ..+..+- +.+++...+++..+. .++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~-~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 80 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLA-EAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEE-FGH 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence 4789999987 999999999555 5598 5666666542 12334444432 2222222 223333333333322 357
Q ss_pred ceEEEeCCCC
Q 017868 256 IDVSFDCAGL 265 (365)
Q Consensus 256 ~d~vid~~g~ 265 (365)
+|++|.++|.
T Consensus 81 ~d~li~~ag~ 90 (248)
T TIGR01832 81 IDILVNNAGI 90 (248)
T ss_pred CCEEEECCCC
Confidence 9999998873
No 220
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.61 E-value=0.095 Score=48.64 Aligned_cols=73 Identities=22% Similarity=0.325 Sum_probs=53.9
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
-.+.++||.|+|-+|..++. .+...|...+..+.++.+|.+ +++++|+..+ .++ + +... -..+|+
T Consensus 176 L~~~~vlvIGAGem~~lva~-~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~----e----l~~~----l~~~Dv 241 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAK-HLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALE----E----LLEA----LAEADV 241 (414)
T ss_pred cccCeEEEEcccHHHHHHHH-HHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHH----H----HHHh----hhhCCE
Confidence 36789999999999999999 555668888888888888764 7799995432 211 1 2221 257999
Q ss_pred EEeCCCCH
Q 017868 259 SFDCAGLN 266 (365)
Q Consensus 259 vid~~g~~ 266 (365)
||.+++.+
T Consensus 242 VissTsa~ 249 (414)
T COG0373 242 VISSTSAP 249 (414)
T ss_pred EEEecCCC
Confidence 99999865
No 221
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.59 E-value=0.14 Score=40.87 Aligned_cols=101 Identities=24% Similarity=0.248 Sum_probs=58.7
Q ss_pred HHhcCC-CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEeCCCCcccHHHHHHHHHH
Q 017868 174 CRRANI-GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 174 ~~~~~~-~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~-~~~~~~~~~~~~~~i~~~~~ 250 (365)
++...+ ..+.+++|.|+|.+|..+++ .+...|...+.+++++.++.+ ++++++... .... .+..+.
T Consensus 10 ~~~~~~~~~~~~i~iiG~G~~g~~~a~-~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~------ 78 (155)
T cd01065 10 LEEAGIELKGKKVLILGAGGAARAVAY-ALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY----LDLEEL------ 78 (155)
T ss_pred HHhhCCCCCCCEEEEECCcHHHHHHHH-HHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee----cchhhc------
Confidence 344343 45688999999999999998 445566556888888877654 456666431 0011 111111
Q ss_pred HhCCCceEEEeCCCCHHH----HHHHHHhcccCCEEEEEcc
Q 017868 251 AMGTGIDVSFDCAGLNKT----MSTALGATCAGGKVCLVGM 287 (365)
Q Consensus 251 ~~~~~~d~vid~~g~~~~----~~~~~~~l~~~G~~~~~g~ 287 (365)
-.++|+|+.|+..... .......+.++..++.++.
T Consensus 79 --~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~ 117 (155)
T cd01065 79 --LAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVY 117 (155)
T ss_pred --cccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence 2579999999875421 1111223455555555543
No 222
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.58 E-value=0.13 Score=44.66 Aligned_cols=82 Identities=17% Similarity=0.212 Sum_probs=47.1
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d 257 (365)
+.++||+|+ |++|..++..+ ...|+++++...+++++.+ +..+++.. ..+..+- +.+++.+.+.+..+..+.++|
T Consensus 5 ~k~ilItGas~gIG~~la~~l-~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAF-AREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 568999987 99999999944 5669865444444444443 33444422 1222221 223334444444333344599
Q ss_pred EEEeCCC
Q 017868 258 VSFDCAG 264 (365)
Q Consensus 258 ~vid~~g 264 (365)
++|.+.|
T Consensus 84 ~li~~ag 90 (253)
T PRK08642 84 TVVNNAL 90 (253)
T ss_pred EEEECCC
Confidence 9999875
No 223
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.58 E-value=0.13 Score=44.54 Aligned_cols=82 Identities=26% Similarity=0.333 Sum_probs=47.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc---CCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI---GAD-NIVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
.+.++||+|+ |.+|..++..++ ..|+ .++.+++++++.+ ..+.+ +.. ..+..+- +.+++...++.+.+. .
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~-~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~ 81 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALA-REGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA-F 81 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-h
Confidence 4678999987 999999999555 5598 5777777765543 22222 221 1222222 122233333333332 2
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|++|.++|.
T Consensus 82 ~~id~vi~~ag~ 93 (250)
T PRK07774 82 GGIDYLVNNAAI 93 (250)
T ss_pred CCCCEEEECCCC
Confidence 479999998883
No 224
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.13 Score=45.31 Aligned_cols=81 Identities=16% Similarity=0.224 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCC-EEEeCCC-CcccHHHHHHHHHHHh
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVST-NLQDIAEEVEKIQKAM 252 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~----g~~-~~~~~~~-~~~~~~~~i~~~~~~~ 252 (365)
++.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+ +++ +.. ..+..+- +..+....+.++.+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~-- 82 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLA-RAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN-- 82 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh--
Confidence 4778999987 899999999554 5699 577777777665432 222 321 1222222 22333333443322
Q ss_pred CCCceEEEeCCCC
Q 017868 253 GTGIDVSFDCAGL 265 (365)
Q Consensus 253 ~~~~d~vid~~g~ 265 (365)
-+++|+++.+.|.
T Consensus 83 ~g~iD~lv~nag~ 95 (263)
T PRK08339 83 IGEPDIFFFSTGG 95 (263)
T ss_pred hCCCcEEEECCCC
Confidence 3579999998873
No 225
>PRK07806 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.41 Score=41.42 Aligned_cols=104 Identities=22% Similarity=0.226 Sum_probs=55.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh-hHHH-HH---HHcCCC-EEEeCCC-CcccHHHHHHHHHHHh
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD-YRLS-VA---KEIGAD-NIVKVST-NLQDIAEEVEKIQKAM 252 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~~~-~~---~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~ 252 (365)
++.++||+|+ |.+|..++..+ ...|++ |+++.++. ++.+ +. +..+.. ..+..+- +.++..+.++++.+.
T Consensus 5 ~~k~vlItGasggiG~~l~~~l-~~~G~~-V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~- 81 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKIL-AGAGAH-VVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE- 81 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHH-HHCCCE-EEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-
Confidence 4678999987 99999999944 456985 55555543 2222 22 222322 1122221 222333333333221
Q ss_pred CCCceEEEeCCCCH-------------------HHHHHHHHhcccCCEEEEEcc
Q 017868 253 GTGIDVSFDCAGLN-------------------KTMSTALGATCAGGKVCLVGM 287 (365)
Q Consensus 253 ~~~~d~vid~~g~~-------------------~~~~~~~~~l~~~G~~~~~g~ 287 (365)
.+++|++|.+.|.. ..++.+...+...|+++.++.
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 24789998877632 123334444555678887754
No 226
>PRK07831 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.18 Score=44.11 Aligned_cols=84 Identities=25% Similarity=0.328 Sum_probs=49.7
Q ss_pred CCCCCEEEEEcC-C-HHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---H-cCCCEE--EeCCCC-cccHHHHHHHH
Q 017868 179 IGPETNVLIMGA-G-PIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K---E-IGADNI--VKVSTN-LQDIAEEVEKI 248 (365)
Q Consensus 179 ~~~g~~vlI~G~-g-~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~---~-~g~~~~--~~~~~~-~~~~~~~i~~~ 248 (365)
+..+.++||+|+ | ++|.++++ .+...|++ |+.+++++++.+.. + + ++...+ +..+-. .++....+.+.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~-~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATAR-RALEEGAR-VVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHH-HHHHcCCE-EEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 445789999986 5 79999999 44566984 67777776654332 2 1 443222 222221 12333333333
Q ss_pred HHHhCCCceEEEeCCCC
Q 017868 249 QKAMGTGIDVSFDCAGL 265 (365)
Q Consensus 249 ~~~~~~~~d~vid~~g~ 265 (365)
.+. .+++|++|.+.|.
T Consensus 92 ~~~-~g~id~li~~ag~ 107 (262)
T PRK07831 92 VER-LGRLDVLVNNAGL 107 (262)
T ss_pred HHH-cCCCCEEEECCCC
Confidence 332 3579999999983
No 227
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.16 Score=44.27 Aligned_cols=81 Identities=26% Similarity=0.286 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI---GADN-IVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~---g~~~-~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
.+.++||+|+ +++|.++++.++ ..|+ +|+.+.++.++.+.+ +++ +... .+..+- +.++..+.+.++.+. -
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYV-EAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE-L 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-h
Confidence 4788999987 999999999554 5699 567777776654432 222 3221 222221 223333334443332 2
Q ss_pred CCceEEEeCCC
Q 017868 254 TGIDVSFDCAG 264 (365)
Q Consensus 254 ~~~d~vid~~g 264 (365)
+++|+++.+.|
T Consensus 85 g~id~lv~~ag 95 (253)
T PRK05867 85 GGIDIAVCNAG 95 (253)
T ss_pred CCCCEEEECCC
Confidence 57999999887
No 228
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=95.53 E-value=0.22 Score=44.04 Aligned_cols=98 Identities=17% Similarity=0.157 Sum_probs=62.3
Q ss_pred CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CCCEEEeCCCCc----ccHHHHHHHHHHHhCCCce
Q 017868 183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI-GADNIVKVSTNL----QDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~-g~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~d 257 (365)
.+|||.|+|. |..+=. +++....++++.|+-+++-.++++++ +....-..+.+. .|-.+.+++ ...++|
T Consensus 78 k~VLiiGgGd-G~tlRe-vlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~----~~~~fD 151 (282)
T COG0421 78 KRVLIIGGGD-GGTLRE-VLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRD----CEEKFD 151 (282)
T ss_pred CeEEEECCCc-cHHHHH-HHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHh----CCCcCC
Confidence 5999997654 444555 66777788999999999999988774 322210001111 122223332 355899
Q ss_pred EEEe-CCCC---------HHHHHHHHHhcccCCEEEEEc
Q 017868 258 VSFD-CAGL---------NKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 258 ~vid-~~g~---------~~~~~~~~~~l~~~G~~~~~g 286 (365)
+||- +... ..-+..+.++|+++|.++..+
T Consensus 152 vIi~D~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q~ 190 (282)
T COG0421 152 VIIVDSTDPVGPAEALFTEEFYEGCRRALKEDGIFVAQA 190 (282)
T ss_pred EEEEcCCCCCCcccccCCHHHHHHHHHhcCCCcEEEEec
Confidence 9864 3322 345668889999999999873
No 229
>PRK12829 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.13 Score=44.92 Aligned_cols=83 Identities=19% Similarity=0.255 Sum_probs=49.5
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC--EEEeCCCC-cccHHHHHHHHHHHhCC
Q 017868 180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGAD--NIVKVSTN-LQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~--~~~~~~~~-~~~~~~~i~~~~~~~~~ 254 (365)
-++.++||+|+ |.+|..++..+ ...|+ .|+.+.++++..+.+ +.+.-. ..+..+-. ..++.+.+.+..+. -.
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L-~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 85 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAF-AEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER-FG 85 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence 46789999987 99999999945 45698 477777776655433 333221 22222222 22222233333222 25
Q ss_pred CceEEEeCCCC
Q 017868 255 GIDVSFDCAGL 265 (365)
Q Consensus 255 ~~d~vid~~g~ 265 (365)
++|.||.+.|.
T Consensus 86 ~~d~vi~~ag~ 96 (264)
T PRK12829 86 GLDVLVNNAGI 96 (264)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 230
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=95.50 E-value=0.14 Score=41.71 Aligned_cols=99 Identities=16% Similarity=0.219 Sum_probs=63.6
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeC-CCC--------------cccHHHHHH
Q 017868 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKV-STN--------------LQDIAEEVE 246 (365)
Q Consensus 182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~-~~~--------------~~~~~~~i~ 246 (365)
.-+|+|+|+|.+|+.|+. +++.+|+ .++..+...++.+..+.++...+... ... .+.+...+.
T Consensus 20 p~~vvv~G~G~vg~gA~~-~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAE-IAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp T-EEEEESTSHHHHHHHH-HHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHH-HHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 368999999999999999 8899999 58888888888888888887554331 110 133333444
Q ss_pred HHHHHhCCCceEEEeCCC---C--HH-HHHHHHHhcccCCEEEEEc
Q 017868 247 KIQKAMGTGIDVSFDCAG---L--NK-TMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 247 ~~~~~~~~~~d~vid~~g---~--~~-~~~~~~~~l~~~G~~~~~g 286 (365)
+.. ..+|++|.+.- . +. .....++.|+++..++.++
T Consensus 98 ~~i----~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis 139 (168)
T PF01262_consen 98 EFI----APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS 139 (168)
T ss_dssp HHH----HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT
T ss_pred HHH----hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE
Confidence 332 35788885321 1 11 1125667788888888775
No 231
>PRK00811 spermidine synthase; Provisional
Probab=95.48 E-value=0.11 Score=46.31 Aligned_cols=98 Identities=18% Similarity=0.147 Sum_probs=62.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC------C---CEEEeCCCCcccHHHHHHHHHH
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG------A---DNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g------~---~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
...++||+.|+|. |..+.. +++..+..+|.+++.+++-.+.++++- . ..+.... .|....++.
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~-~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~---~Da~~~l~~--- 146 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLRE-VLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI---GDGIKFVAE--- 146 (283)
T ss_pred CCCCEEEEEecCc-hHHHHH-HHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE---CchHHHHhh---
Confidence 3567999998865 666666 666667778999999998888876631 1 1111111 232233322
Q ss_pred HhCCCceEEEeCCCC----------HHHHHHHHHhcccCCEEEEEc
Q 017868 251 AMGTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 251 ~~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~~~~g 286 (365)
..+.+|+||--... ...+..+.++|+++|.++...
T Consensus 147 -~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~ 191 (283)
T PRK00811 147 -TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS 191 (283)
T ss_pred -CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 25689999863311 223457788999999998763
No 232
>PRK06500 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.16 Score=43.97 Aligned_cols=82 Identities=26% Similarity=0.338 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEE-EeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNI-VKVST-NLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~~~~~ 256 (365)
++.++||+|+ |.+|.++++.+ ...|+ .++.+++++++.+ ..++++.... +..+- +..+....+..+.+. .+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l-~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~i 81 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQF-LAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEA-FGRL 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHH-HHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCC
Confidence 4678999987 99999999945 45698 5777777766544 3455654321 22221 112222233333222 3579
Q ss_pred eEEEeCCCC
Q 017868 257 DVSFDCAGL 265 (365)
Q Consensus 257 d~vid~~g~ 265 (365)
|++|.++|.
T Consensus 82 d~vi~~ag~ 90 (249)
T PRK06500 82 DAVFINAGV 90 (249)
T ss_pred CEEEECCCC
Confidence 999998873
No 233
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=95.46 E-value=0.1 Score=46.52 Aligned_cols=46 Identities=33% Similarity=0.455 Sum_probs=37.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEI 226 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~ 226 (365)
..+.+|+|.|+|+.|.+++. .+...|++.+..++++.+|.+. ++.+
T Consensus 125 ~~~k~vlIlGaGGaaraia~-aL~~~G~~~I~I~nR~~~ka~~la~~l 171 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAH-ALLTLGVERLTIFDVDPARAAALADEL 171 (284)
T ss_pred ccCCEEEEECCcHHHHHHHH-HHHHcCCCEEEEECCCHHHHHHHHHHH
Confidence 35678999999999999999 6667899889999998887664 3444
No 234
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.46 E-value=0.074 Score=45.09 Aligned_cols=36 Identities=31% Similarity=0.513 Sum_probs=29.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD 217 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~ 217 (365)
+..+|+|.|.|++|.+++. .+.+.|+.++..+|-++
T Consensus 29 ~~~~V~VvGiGGVGSw~ve-ALaRsGig~itlID~D~ 64 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVE-ALARSGIGRITLIDMDD 64 (263)
T ss_pred hhCcEEEEecCchhHHHHH-HHHHcCCCeEEEEeccc
Confidence 4578999999999999999 55567999888886543
No 235
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.45 E-value=0.094 Score=50.64 Aligned_cols=73 Identities=27% Similarity=0.418 Sum_probs=51.5
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868 179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
+.++++|+|+|.|..|++++. +++..|+ .|++.+..+.+.+.++++|+.. +.. . ...+.+ ..+|+
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~-~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~-~---~~~~~l--------~~~D~ 73 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLA-ALTRFGA-RPTVCDDDPDALRPHAERGVAT-VST-S---DAVQQI--------ADYAL 73 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHH-HHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcC-c---chHhHh--------hcCCE
Confidence 557899999999999999999 7888899 5777887766666667777643 211 1 111111 35799
Q ss_pred EEeCCCCH
Q 017868 259 SFDCAGLN 266 (365)
Q Consensus 259 vid~~g~~ 266 (365)
|+.+.|.+
T Consensus 74 VV~SpGi~ 81 (488)
T PRK03369 74 VVTSPGFR 81 (488)
T ss_pred EEECCCCC
Confidence 99988854
No 236
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.45 E-value=0.47 Score=39.91 Aligned_cols=89 Identities=12% Similarity=0.191 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh-hH-HHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD-YR-LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
.|.+|||.|+|.+|...+. .+...|+ .|.+++... +. .+++.. +.. .+... .+.. ..-.++|+
T Consensus 9 ~~k~vLVIGgG~va~~ka~-~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~i---~~~~~--~~~~-------~~l~~adl 73 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAI-TLLKYGA-HIVVISPELTENLVKLVEE-GKI---RWKQK--EFEP-------SDIVDAFL 73 (202)
T ss_pred CCCEEEEECCCHHHHHHHH-HHHHCCC-eEEEEcCCCCHHHHHHHhC-CCE---EEEec--CCCh-------hhcCCceE
Confidence 5679999999999999888 4455688 455554332 12 223222 211 11111 1110 01257899
Q ss_pred EEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868 259 SFDCAGLNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 259 vid~~g~~~~~~~~~~~l~~~G~~~~~ 285 (365)
||-|++.+. ++..+...+..+.++..
T Consensus 74 ViaaT~d~e-lN~~i~~~a~~~~lvn~ 99 (202)
T PRK06718 74 VIAATNDPR-VNEQVKEDLPENALFNV 99 (202)
T ss_pred EEEcCCCHH-HHHHHHHHHHhCCcEEE
Confidence 999999874 44444433344555544
No 237
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.45 E-value=0.12 Score=45.06 Aligned_cols=81 Identities=23% Similarity=0.217 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH---cCCC-EEEeCCC-CcccHHHHHHHHHHHhCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE---IGAD-NIVKVST-NLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~---~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~ 254 (365)
++.++||+|+ |++|..+++.++ ..|++ ++.+.+++++.+..++ .+.. ..+..+- +.+++...+.++.+. .+
T Consensus 6 ~~~~ilItGasggiG~~la~~l~-~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 82 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLA-EEGAI-PVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK-FG 82 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-HcCCc-EEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-cC
Confidence 4678999987 999999998565 45985 5556666665544333 2322 1222221 122233333333332 35
Q ss_pred CceEEEeCCC
Q 017868 255 GIDVSFDCAG 264 (365)
Q Consensus 255 ~~d~vid~~g 264 (365)
++|++|.++|
T Consensus 83 ~id~vi~~ag 92 (258)
T PRK08628 83 RIDGLVNNAG 92 (258)
T ss_pred CCCEEEECCc
Confidence 8999999988
No 238
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.45 E-value=0.2 Score=44.35 Aligned_cols=82 Identities=21% Similarity=0.160 Sum_probs=49.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC--EEEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD--NIVKVST-NLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~--~~~~~~~-~~~~~~~~i~~~~~~~~~~~ 256 (365)
.+.++||+|+ |++|.++++.+ ...|+ .|+++++++++.+.+.+.... ..+..+- +.++....++...+. -+++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l-~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~~~~ 79 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAA-LAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEAT-FGPI 79 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHH-HhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHH-hCCC
Confidence 3568999987 99999999945 45698 577777877776554443211 1122121 122333333333222 2469
Q ss_pred eEEEeCCCC
Q 017868 257 DVSFDCAGL 265 (365)
Q Consensus 257 d~vid~~g~ 265 (365)
|+++.+.|.
T Consensus 80 d~vv~~ag~ 88 (277)
T PRK06180 80 DVLVNNAGY 88 (277)
T ss_pred CEEEECCCc
Confidence 999998874
No 239
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.44 E-value=0.17 Score=44.43 Aligned_cols=82 Identities=22% Similarity=0.298 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH----cCCCEE--EeCCC-CcccHHHHHHHHHHH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KE----IGADNI--VKVST-NLQDIAEEVEKIQKA 251 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~----~g~~~~--~~~~~-~~~~~~~~i~~~~~~ 251 (365)
.+.++||+|+ +++|.++++.+ ...|+ +|+.+++++++.+.+ ++ .+...+ +..+- +.++..+.+.++.+.
T Consensus 7 ~~k~~lItGas~giG~~ia~~l-~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELL-LEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHH-HHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 4678999987 89999999944 46699 467777777654322 22 211122 21121 222333333333332
Q ss_pred hCCCceEEEeCCCC
Q 017868 252 MGTGIDVSFDCAGL 265 (365)
Q Consensus 252 ~~~~~d~vid~~g~ 265 (365)
-+++|++|.++|.
T Consensus 85 -~g~id~li~~Ag~ 97 (265)
T PRK07062 85 -FGGVDMLVNNAGQ 97 (265)
T ss_pred -cCCCCEEEECCCC
Confidence 3579999999873
No 240
>PRK08589 short chain dehydrogenase; Validated
Probab=95.44 E-value=0.18 Score=44.48 Aligned_cols=81 Identities=23% Similarity=0.346 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc---CCC-EEEeCCC-CcccHHHHHHHHHHHhCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~ 254 (365)
++.++||+|+ +++|.++++.++ ..|+ +|+.++++++..+.++++ +.. ..+..+- +..+....+.++.+. -+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~-~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g 81 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALA-QEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQ-FG 81 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHH-cC
Confidence 4678999987 999999999555 5598 567776764333333333 321 1222221 223333444444332 35
Q ss_pred CceEEEeCCC
Q 017868 255 GIDVSFDCAG 264 (365)
Q Consensus 255 ~~d~vid~~g 264 (365)
++|++|.++|
T Consensus 82 ~id~li~~Ag 91 (272)
T PRK08589 82 RVDVLFNNAG 91 (272)
T ss_pred CcCEEEECCC
Confidence 7999999886
No 241
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.44 E-value=0.15 Score=43.75 Aligned_cols=104 Identities=23% Similarity=0.341 Sum_probs=69.4
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHH----HHHcCCCEEEeCCCCcccHHHHHHHH
Q 017868 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSV----AKEIGADNIVKVSTNLQDIAEEVEKI 248 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~i~~~ 248 (365)
+...++.+|++|+=.|.|+ |.+++- |++..|. .++++.+..++..+. ++++|....+.+ ...|..+.+
T Consensus 87 ~~~~gi~pg~rVlEAGtGS-G~lt~~-La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~--~~~Dv~~~~--- 159 (256)
T COG2519 87 VARLGISPGSRVLEAGTGS-GALTAY-LARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTL--KLGDVREGI--- 159 (256)
T ss_pred HHHcCCCCCCEEEEcccCc-hHHHHH-HHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEE--Eeccccccc---
Confidence 4567899999999988754 767777 7776665 588999888876554 455555442221 112222211
Q ss_pred HHHhCCCceEE-EeCCCCHHHHHHHHHhcccCCEEEEEcc
Q 017868 249 QKAMGTGIDVS-FDCAGLNKTMSTALGATCAGGKVCLVGM 287 (365)
Q Consensus 249 ~~~~~~~~d~v-id~~g~~~~~~~~~~~l~~~G~~~~~g~ 287 (365)
.+..+|.+ +|--.....++++.+.|+++|.++.+..
T Consensus 160 ---~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P 196 (256)
T COG2519 160 ---DEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP 196 (256)
T ss_pred ---cccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence 13478876 4554555688899999999999999854
No 242
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.43 E-value=0.21 Score=44.26 Aligned_cols=82 Identities=18% Similarity=0.282 Sum_probs=48.5
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHHCCCCeEEEEeCChh---HHH-HHHHcCCCEEEeCCC-CcccHHHHHHHHHHHh
Q 017868 181 PETNVLIMGA---GPIGLVTMLGAPRAFGAPRIVIVDVDDY---RLS-VAKEIGADNIVKVST-NLQDIAEEVEKIQKAM 252 (365)
Q Consensus 181 ~g~~vlI~G~---g~~G~~ai~~l~~~~g~~~vi~v~~~~~---~~~-~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~ 252 (365)
.++++||+|+ +++|.++++.++ ..|+ +|+.+.++++ +.+ ..++++....+..+- +.++....+.++.+.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la-~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~- 80 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACF-EQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKD- 80 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHH-HCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHH-
Confidence 4678999986 489999999555 5699 4666666542 222 334455433232222 223344444444332
Q ss_pred CCCceEEEeCCCC
Q 017868 253 GTGIDVSFDCAGL 265 (365)
Q Consensus 253 ~~~~d~vid~~g~ 265 (365)
.+.+|++|.++|.
T Consensus 81 ~g~iDilVnnAG~ 93 (274)
T PRK08415 81 LGKIDFIVHSVAF 93 (274)
T ss_pred cCCCCEEEECCcc
Confidence 3579999998873
No 243
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=95.42 E-value=0.072 Score=40.75 Aligned_cols=92 Identities=20% Similarity=0.140 Sum_probs=54.4
Q ss_pred EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH-HHHHHHcC---CCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868 184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR-LSVAKEIG---ADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~-~~~~~~~g---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
+|.|+|+ |.+|..++.+|+++..++.+..+.++.+. ..+...++ ......+.. .+ ...+ ..+|+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~----~~~~-----~~~Dv 69 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--AD----PEEL-----SDVDV 69 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TS----GHHH-----TTESE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cc----hhHh-----hcCCE
Confidence 5889996 99999999988887778666666655522 22222222 111121111 11 1111 58999
Q ss_pred EEeCCCCHHHHHHHHHhcccCCEEEEEc
Q 017868 259 SFDCAGLNKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 259 vid~~g~~~~~~~~~~~l~~~G~~~~~g 286 (365)
||.|.+.....+..-..+..+-.++..+
T Consensus 70 vf~a~~~~~~~~~~~~~~~~g~~ViD~s 97 (121)
T PF01118_consen 70 VFLALPHGASKELAPKLLKAGIKVIDLS 97 (121)
T ss_dssp EEE-SCHHHHHHHHHHHHHTTSEEEESS
T ss_pred EEecCchhHHHHHHHHHhhCCcEEEeCC
Confidence 9999997645444555566666676664
No 244
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.40 E-value=0.16 Score=44.55 Aligned_cols=81 Identities=23% Similarity=0.336 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc--CC-CEEEeCCCCc-ccHHHHHHHHHHHhCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI--GA-DNIVKVSTNL-QDIAEEVEKIQKAMGT 254 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~--g~-~~~~~~~~~~-~~~~~~i~~~~~~~~~ 254 (365)
++.++||+|+ |++|..++..++ ..|+ .|+++++++++.+.+ .++ +. ...+..+-.+ .+.......+.+ .+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~ 79 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALA-AAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MG 79 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cC
Confidence 4678999987 999999999554 5698 477777777665433 332 21 1122222211 222222222222 35
Q ss_pred CceEEEeCCCC
Q 017868 255 GIDVSFDCAGL 265 (365)
Q Consensus 255 ~~d~vid~~g~ 265 (365)
++|.++.++|.
T Consensus 80 ~id~lv~~ag~ 90 (263)
T PRK09072 80 GINVLINNAGV 90 (263)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 245
>PRK01581 speE spermidine synthase; Validated
Probab=95.39 E-value=0.32 Score=44.48 Aligned_cols=98 Identities=16% Similarity=0.116 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-----------CCEEEeCCCCcccHHHHHHHH
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG-----------ADNIVKVSTNLQDIAEEVEKI 248 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g-----------~~~~~~~~~~~~~~~~~i~~~ 248 (365)
....+|||.|+|. |.++.. +++..+..+|.+++.+++-.+.++++. .+.+.... .|..+.++.
T Consensus 149 ~~PkrVLIIGgGd-G~tlre-lLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi---~Da~~fL~~- 222 (374)
T PRK01581 149 IDPKRVLILGGGD-GLALRE-VLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHV---CDAKEFLSS- 222 (374)
T ss_pred CCCCEEEEECCCH-HHHHHH-HHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEE---CcHHHHHHh-
Confidence 4446999998763 666666 666666678999999999999888631 11111111 233333332
Q ss_pred HHHhCCCceEEEeCCCC-----------HHHHHHHHHhcccCCEEEEEc
Q 017868 249 QKAMGTGIDVSFDCAGL-----------NKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 249 ~~~~~~~~d~vid~~g~-----------~~~~~~~~~~l~~~G~~~~~g 286 (365)
....+|+||--... .+.+..+.+.|+++|.++...
T Consensus 223 ---~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs 268 (374)
T PRK01581 223 ---PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS 268 (374)
T ss_pred ---cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 25689999764321 224567888999999988764
No 246
>PRK04148 hypothetical protein; Provisional
Probab=95.38 E-value=0.46 Score=36.83 Aligned_cols=93 Identities=13% Similarity=0.192 Sum_probs=61.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 259 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 259 (365)
.++.++++.|.| .|...+..|+ ..|. .|+++|.+++..+.+++.+...+.. +--+.+. . + -.++|++
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~-~~G~-~ViaIDi~~~aV~~a~~~~~~~v~d-Dlf~p~~--~---~----y~~a~li 81 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLK-ESGF-DVIVIDINEKAVEKAKKLGLNAFVD-DLFNPNL--E---I----YKNAKLI 81 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHhCCeEEEC-cCCCCCH--H---H----HhcCCEE
Confidence 456889999998 7875555254 6698 7999999999999998888755432 1111111 1 1 3689999
Q ss_pred EeCCCCHHHHHHHHHhcccC-CEEEEE
Q 017868 260 FDCAGLNKTMSTALGATCAG-GKVCLV 285 (365)
Q Consensus 260 id~~g~~~~~~~~~~~l~~~-G~~~~~ 285 (365)
...--.++.....++.-+.- ..+++.
T Consensus 82 ysirpp~el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 82 YSIRPPRDLQPFILELAKKINVPLIIK 108 (134)
T ss_pred EEeCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 99887776665555544433 334443
No 247
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.35 E-value=0.36 Score=40.92 Aligned_cols=100 Identities=17% Similarity=0.130 Sum_probs=61.0
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHH
Q 017868 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQ 249 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~i~~~~ 249 (365)
+...+++++++||-.|+|. |..+.. +++.. . .+++++.+++..+.++ +++...+.....+ ..+.+.
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~-la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d---~~~~~~--- 140 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAV-LAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGD---GWKGWP--- 140 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHH-HHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECC---cccCCC---
Confidence 4567788999999998754 444444 55543 3 6899998877665443 3454332111111 101010
Q ss_pred HHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868 250 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 250 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~ 285 (365)
....+|+|+.............+.|+++|.++..
T Consensus 141 --~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~ 174 (212)
T PRK00312 141 --AYAPFDRILVTAAAPEIPRALLEQLKEGGILVAP 174 (212)
T ss_pred --cCCCcCEEEEccCchhhhHHHHHhcCCCcEEEEE
Confidence 0257999887555444556788899999998764
No 248
>PRK12939 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.23 Score=42.98 Aligned_cols=82 Identities=17% Similarity=0.162 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HH---HcCCC-EEEeCCCCc-ccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AK---EIGAD-NIVKVSTNL-QDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~---~~g~~-~~~~~~~~~-~~~~~~i~~~~~~~~ 253 (365)
++.++||+|+ |++|..++..+ ...|+ .++.+++++++.+. .+ ..+.. ..+..+-.+ +++.+.+....+. -
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l-~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~ 82 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEAL-AEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA-L 82 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHH-HHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence 4688999987 99999999945 45698 46667777665432 22 22322 122222221 2222222222221 2
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|++|.++|.
T Consensus 83 ~~id~vi~~ag~ 94 (250)
T PRK12939 83 GGLDGLVNNAGI 94 (250)
T ss_pred CCCCEEEECCCC
Confidence 579999999874
No 249
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.35 E-value=0.21 Score=43.28 Aligned_cols=82 Identities=21% Similarity=0.196 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcC--CC-EEEeCCC-CcccHHHHHHHHHHHhCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIG--AD-NIVKVST-NLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g--~~-~~~~~~~-~~~~~~~~i~~~~~~~~~ 254 (365)
.+.++||+|+ |.+|..+++.++ ..|++ |+.+++++++.+.+ ..+. .. ..+..+- +..++...+++.... ..
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~-~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 80 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFA-AEGAR-VVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALER-FG 80 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHH-HCCCE-EEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence 4568999987 999999999554 55985 77777877665433 3332 11 1222221 223333333333222 35
Q ss_pred CceEEEeCCCC
Q 017868 255 GIDVSFDCAGL 265 (365)
Q Consensus 255 ~~d~vid~~g~ 265 (365)
++|++|.++|.
T Consensus 81 ~~d~vi~~ag~ 91 (251)
T PRK07231 81 SVDILVNNAGT 91 (251)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 250
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.34 E-value=0.2 Score=43.91 Aligned_cols=81 Identities=19% Similarity=0.213 Sum_probs=46.1
Q ss_pred CCCEEEEEcC-C--HHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCEEEeCCC-CcccHHHHHHHHHHHh
Q 017868 181 PETNVLIMGA-G--PIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADNIVKVST-NLQDIAEEVEKIQKAM 252 (365)
Q Consensus 181 ~g~~vlI~G~-g--~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~ 252 (365)
.|.++||+|+ + ++|.++++.++ ..|++ |+.+.++++..+ +.++.+....+..+- +.++....++++.+.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la-~~G~~-v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~- 83 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAK-KHGAE-LWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK- 83 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHH-HcCCE-EEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH-
Confidence 5678999987 4 79999988454 56995 555555532222 223334333222222 223444444444332
Q ss_pred CCCceEEEeCCC
Q 017868 253 GTGIDVSFDCAG 264 (365)
Q Consensus 253 ~~~~d~vid~~g 264 (365)
-+.+|+++.++|
T Consensus 84 ~g~iDilVnnag 95 (260)
T PRK06603 84 WGSFDFLLHGMA 95 (260)
T ss_pred cCCccEEEEccc
Confidence 257999999876
No 251
>PRK08317 hypothetical protein; Provisional
Probab=95.32 E-value=0.21 Score=42.98 Aligned_cols=103 Identities=22% Similarity=0.299 Sum_probs=66.4
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHc--C-CCEEEeCCCCcccHHHHHHHHH
Q 017868 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKEI--G-ADNIVKVSTNLQDIAEEVEKIQ 249 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~~--g-~~~~~~~~~~~~~~~~~i~~~~ 249 (365)
++...+.++++||-.|+|. |..+.. +++..+ ...+++++.+++..+.+++. . ...+.....+..++.
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~-~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~------- 82 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARE-LARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLP------- 82 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHH-HHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCC-------
Confidence 3567788999999999865 777777 766653 34799999999888777664 1 111111001111110
Q ss_pred HHhCCCceEEEeCC------CCHHHHHHHHHhcccCCEEEEEc
Q 017868 250 KAMGTGIDVSFDCA------GLNKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 250 ~~~~~~~d~vid~~------g~~~~~~~~~~~l~~~G~~~~~g 286 (365)
.....+|+|+... .....+..+.++|+++|.+++..
T Consensus 83 -~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 83 -FPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred -CCCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 1135789887632 12346678889999999998764
No 252
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.23 Score=43.38 Aligned_cols=83 Identities=20% Similarity=0.254 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~ 253 (365)
.+.+++|+|+ |++|..+++.+ ...|++.|+.+++++++.. .+++.+... .+..+-. .+++.+.+....+. -
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l-~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 82 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAF-AERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA-F 82 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHH-HHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-h
Confidence 5678999987 99999999944 5669965777877765443 223334322 1222222 22233333333222 2
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|++|.+.|.
T Consensus 83 g~id~li~~ag~ 94 (260)
T PRK06198 83 GRLDALVNAAGL 94 (260)
T ss_pred CCCCEEEECCCc
Confidence 479999999874
No 253
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=95.31 E-value=0.27 Score=39.34 Aligned_cols=93 Identities=19% Similarity=0.245 Sum_probs=58.7
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868 178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 257 (365)
..-.|.+++|.|=|.+|.-.++ .++.+|+ +|++++.++.+.-.+..-|... . . +.+. -...|
T Consensus 19 ~~l~Gk~vvV~GYG~vG~g~A~-~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v-~-------~----~~~a----~~~ad 80 (162)
T PF00670_consen 19 LMLAGKRVVVIGYGKVGKGIAR-ALRGLGA-RVTVTEIDPIRALQAAMDGFEV-M-------T----LEEA----LRDAD 80 (162)
T ss_dssp S--TTSEEEEE--SHHHHHHHH-HHHHTT--EEEEE-SSHHHHHHHHHTT-EE-E------------HHHH----TTT-S
T ss_pred eeeCCCEEEEeCCCcccHHHHH-HHhhCCC-EEEEEECChHHHHHhhhcCcEe-c-------C----HHHH----HhhCC
Confidence 3468899999999999999999 8899999 7888888887765555545432 1 1 2222 25789
Q ss_pred EEEeCCCCHHH-HHHHHHhcccCCEEEEEccC
Q 017868 258 VSFDCAGLNKT-MSTALGATCAGGKVCLVGMG 288 (365)
Q Consensus 258 ~vid~~g~~~~-~~~~~~~l~~~G~~~~~g~~ 288 (365)
++|.++|.... -..-+..|+++..+...|..
T Consensus 81 i~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~ 112 (162)
T PF00670_consen 81 IFVTATGNKDVITGEHFRQMKDGAILANAGHF 112 (162)
T ss_dssp EEEE-SSSSSSB-HHHHHHS-TTEEEEESSSS
T ss_pred EEEECCCCccccCHHHHHHhcCCeEEeccCcC
Confidence 99999997643 24667788877776666543
No 254
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.28 E-value=0.23 Score=45.11 Aligned_cols=81 Identities=20% Similarity=0.345 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC---C-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGA---D-NIVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~---~-~~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
.+.++||+|+ |++|..+++.++ ..|+ .|+.++++.++.+ ..+++.. . ..+..+- +..+....+.++.+ ..
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~ 81 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALA-KRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRA-LG 81 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHH-hC
Confidence 4678999987 999999999554 5588 5677777776654 3344421 1 1122221 12223333333222 24
Q ss_pred CCceEEEeCCC
Q 017868 254 TGIDVSFDCAG 264 (365)
Q Consensus 254 ~~~d~vid~~g 264 (365)
.++|++|.++|
T Consensus 82 ~~iD~li~nAg 92 (322)
T PRK07453 82 KPLDALVCNAA 92 (322)
T ss_pred CCccEEEECCc
Confidence 57999999887
No 255
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.19 Score=43.89 Aligned_cols=81 Identities=26% Similarity=0.349 Sum_probs=48.1
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcC-C-CEEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868 183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIG-A-DNIVKVST-NLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g-~-~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d 257 (365)
.++||+|+ |.+|..+++.++ ..|+ .|+.++++.++.+.+ +.++ . ...+..+- +..++.+.++.+.+...+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFA-AEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHH-HCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence 47899987 999999999555 5598 577777777765543 4333 1 11222222 222333333333222145799
Q ss_pred EEEeCCCC
Q 017868 258 VSFDCAGL 265 (365)
Q Consensus 258 ~vid~~g~ 265 (365)
+++.++|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99998874
No 256
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=95.26 E-value=0.47 Score=40.65 Aligned_cols=91 Identities=24% Similarity=0.293 Sum_probs=58.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCC--eEEEEeCC----hhH--------HHHHHHcCCCEEEeCCCCcccHHHHH
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAP--RIVIVDVD----DYR--------LSVAKEIGADNIVKVSTNLQDIAEEV 245 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~--~vi~v~~~----~~~--------~~~~~~~g~~~~~~~~~~~~~~~~~i 245 (365)
-++.+++|.|+|+.|.+++. .+...|++ ++..++++ .+| .++++.++... . ..++.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~-~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~-----~~~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIAR-LLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T-----GGTLKEAL 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHH-HHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c-----cCCHHHHH
Confidence 45689999999999999998 55667998 89999887 333 34555544211 0 01222222
Q ss_pred HHHHHHhCCCceEEEeCCCCHHHH-HHHHHhcccCCEEEEEc
Q 017868 246 EKIQKAMGTGIDVSFDCAGLNKTM-STALGATCAGGKVCLVG 286 (365)
Q Consensus 246 ~~~~~~~~~~~d~vid~~g~~~~~-~~~~~~l~~~G~~~~~g 286 (365)
.++|++|.+++.. .+ ...++.+.+...+..+.
T Consensus 96 --------~~~dvlIgaT~~G-~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 96 --------KGADVFIGVSRPG-VVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred --------hcCCEEEeCCCCC-CCCHHHHHhhCCCCEEEEeC
Confidence 2489999998732 32 35566666666555443
No 257
>PRK08265 short chain dehydrogenase; Provisional
Probab=95.24 E-value=0.25 Score=43.32 Aligned_cols=82 Identities=22% Similarity=0.274 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~ 256 (365)
++.++||+|+ +++|.+++..++ ..|+ .|+.++++.++.+ +.++++... .+..+- +.+++.+.+.++.+. -+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~i 81 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALV-AAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVAR-FGRV 81 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHH-hCCC
Confidence 4679999987 999999999554 5699 5777777776544 445555321 222222 223333444443332 3579
Q ss_pred eEEEeCCCC
Q 017868 257 DVSFDCAGL 265 (365)
Q Consensus 257 d~vid~~g~ 265 (365)
|++|.+.|.
T Consensus 82 d~lv~~ag~ 90 (261)
T PRK08265 82 DILVNLACT 90 (261)
T ss_pred CEEEECCCC
Confidence 999998873
No 258
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=95.23 E-value=0.44 Score=36.07 Aligned_cols=87 Identities=24% Similarity=0.259 Sum_probs=58.9
Q ss_pred EEEEEcCCHHHHHHHHHHHHH-CCCCeEEEEeCChhHHHH-HHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868 184 NVLIMGAGPIGLVTMLGAPRA-FGAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 261 (365)
Q Consensus 184 ~vlI~G~g~~G~~ai~~l~~~-~g~~~vi~v~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 261 (365)
++.|.|+|..|.....-+.+. .+.+.+.+++.++++.+. .++++.. .+ .++.+.+. ...+|+|+-
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~------~~~~~ll~------~~~~D~V~I 68 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VY------TDLEELLA------DEDVDAVII 68 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EE------SSHHHHHH------HTTESEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-ch------hHHHHHHH------hhcCCEEEE
Confidence 578999999998877634444 355445556777776664 5778877 22 23333332 247999999
Q ss_pred CCCCHHHHHHHHHhcccCCEEE
Q 017868 262 CAGLNKTMSTALGATCAGGKVC 283 (365)
Q Consensus 262 ~~g~~~~~~~~~~~l~~~G~~~ 283 (365)
++....+.+....++..+-.+.
T Consensus 69 ~tp~~~h~~~~~~~l~~g~~v~ 90 (120)
T PF01408_consen 69 ATPPSSHAEIAKKALEAGKHVL 90 (120)
T ss_dssp ESSGGGHHHHHHHHHHTTSEEE
T ss_pred ecCCcchHHHHHHHHHcCCEEE
Confidence 9998878888888888666433
No 259
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.19 E-value=0.35 Score=41.86 Aligned_cols=34 Identities=29% Similarity=0.473 Sum_probs=28.3
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
+.+|+|.|+|++|..+++ .+.+.|..++..+|.+
T Consensus 24 ~~~VlvvG~GglGs~va~-~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQ-YLAAAGVGNLTLLDFD 57 (240)
T ss_pred CCcEEEECcCHHHHHHHH-HHHHcCCCEEEEEeCC
Confidence 368999999999999999 5556799888888654
No 260
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.19 E-value=0.32 Score=41.22 Aligned_cols=35 Identities=31% Similarity=0.403 Sum_probs=29.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
...+|+|.|+|++|..+++ .+.+.|...+..+|.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~-~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAV-ALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHH-HHHHcCCCeEEEEeCC
Confidence 4468999999999999999 4456699888888776
No 261
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.2 Score=45.38 Aligned_cols=81 Identities=20% Similarity=0.266 Sum_probs=46.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc----C-CC-EEEeCCC-CcccHHHHHHHHHHH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI----G-AD-NIVKVST-NLQDIAEEVEKIQKA 251 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~----g-~~-~~~~~~~-~~~~~~~~i~~~~~~ 251 (365)
.+.+++|+|+ +++|.+++..++ ..|+ +|+.+.++.++.+ .++++ + .. ..+..+- +..+......++.+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La-~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~- 89 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLA-AAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA- 89 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH-
Confidence 4678999987 999999999555 5598 5666667766543 22222 1 11 1222222 12222223333322
Q ss_pred hCCCceEEEeCCC
Q 017868 252 MGTGIDVSFDCAG 264 (365)
Q Consensus 252 ~~~~~d~vid~~g 264 (365)
..+++|++|.++|
T Consensus 90 ~~~~iD~li~nAG 102 (313)
T PRK05854 90 EGRPIHLLINNAG 102 (313)
T ss_pred hCCCccEEEECCc
Confidence 2457999999887
No 262
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.17 E-value=0.28 Score=42.74 Aligned_cols=82 Identities=20% Similarity=0.186 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K---EIGADN-IVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~---~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
.+.++||+|+ +++|.+++..++ ..|+ .|+.+.+++++.+.+ + +.+... .+..+- +.++....++++.+. .
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~-~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 81 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFA-REGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER-F 81 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh-c
Confidence 3678999987 999999999554 5699 567777776655432 2 233322 222222 222333334433332 3
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|++|.++|.
T Consensus 82 ~~id~li~~ag~ 93 (254)
T PRK07478 82 GGLDIAFNNAGT 93 (254)
T ss_pred CCCCEEEECCCC
Confidence 579999998873
No 263
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.14 E-value=0.31 Score=44.52 Aligned_cols=35 Identities=37% Similarity=0.542 Sum_probs=29.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
...+|+|.|+|++|..++. .+...|...+..+|.+
T Consensus 23 ~~~~VlVvG~GglGs~va~-~La~aGvg~i~lvD~D 57 (339)
T PRK07688 23 REKHVLIIGAGALGTANAE-MLVRAGVGKVTIVDRD 57 (339)
T ss_pred cCCcEEEECCCHHHHHHHH-HHHHcCCCeEEEEeCC
Confidence 3468999999999999999 5556699889999875
No 264
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.14 E-value=0.26 Score=43.27 Aligned_cols=82 Identities=17% Similarity=0.214 Sum_probs=46.8
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEeCCC-CcccHHHHHHHHHHHh
Q 017868 181 PETNVLIMGA---GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVST-NLQDIAEEVEKIQKAM 252 (365)
Q Consensus 181 ~g~~vlI~G~---g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~ 252 (365)
++.++||+|+ +++|.++++.++ ..|++ |+.+.+.+...+.+ ++++....+..+- +.++....+.+..+.
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~-~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~- 81 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACR-EQGAE-LAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH- 81 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHH-HCCCE-EEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH-
Confidence 4678999984 589999999454 56995 55554443322222 2334322232222 233444444444332
Q ss_pred CCCceEEEeCCCC
Q 017868 253 GTGIDVSFDCAGL 265 (365)
Q Consensus 253 ~~~~d~vid~~g~ 265 (365)
.+++|+++.++|.
T Consensus 82 ~g~iD~lVnnAG~ 94 (261)
T PRK08690 82 WDGLDGLVHSIGF 94 (261)
T ss_pred hCCCcEEEECCcc
Confidence 3579999998874
No 265
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.14 E-value=0.32 Score=44.41 Aligned_cols=35 Identities=37% Similarity=0.521 Sum_probs=28.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
.+.+|+|.|+|++|..++. .+...|..++..+|.+
T Consensus 23 ~~~~VlIiG~GglGs~va~-~La~aGvg~i~lvD~D 57 (338)
T PRK12475 23 REKHVLIVGAGALGAANAE-ALVRAGIGKLTIADRD 57 (338)
T ss_pred cCCcEEEECCCHHHHHHHH-HHHHcCCCEEEEEcCC
Confidence 3468999999999999999 5456699888888775
No 266
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.13 E-value=0.24 Score=43.26 Aligned_cols=81 Identities=28% Similarity=0.340 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc---CCCE-EEeCCC-CcccHHHHHHHHHHHhCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI---GADN-IVKVST-NLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~---g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~ 254 (365)
.+.++||+|+ +++|.++++.+ ...|+ .|+.+++++...+..+++ +... .+..+- +.++....+++..+. .+
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l-~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 83 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRA-AAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA-FG 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHH-HHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH-cC
Confidence 4678999987 99999999945 45698 567777765433333332 3321 111111 222333344444332 35
Q ss_pred CceEEEeCCC
Q 017868 255 GIDVSFDCAG 264 (365)
Q Consensus 255 ~~d~vid~~g 264 (365)
++|+++.++|
T Consensus 84 ~id~lv~nAg 93 (260)
T PRK12823 84 RIDVLINNVG 93 (260)
T ss_pred CCeEEEECCc
Confidence 7999999886
No 267
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.24 Score=42.63 Aligned_cols=83 Identities=20% Similarity=0.325 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC--EE--EeCCC-CcccHHHHHHHHHH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI---GAD--NI--VKVST-NLQDIAEEVEKIQK 250 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~---g~~--~~--~~~~~-~~~~~~~~i~~~~~ 250 (365)
++.+++|+|+ |++|..+++.++ ..|+ .|+.+++++++.+.+ .++ +.. .. .+... ...++......+.+
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~-~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYA-AAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE 82 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-HcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence 4578999987 999999999554 5698 577777877655432 222 211 11 22211 12233333333433
Q ss_pred HhCCCceEEEeCCCC
Q 017868 251 AMGTGIDVSFDCAGL 265 (365)
Q Consensus 251 ~~~~~~d~vid~~g~ 265 (365)
..+..+|++|.++|.
T Consensus 83 ~~~~~id~vi~~ag~ 97 (239)
T PRK08703 83 ATQGKLDGIVHCAGY 97 (239)
T ss_pred HhCCCCCEEEEeccc
Confidence 333578999998883
No 268
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.11 E-value=0.27 Score=42.91 Aligned_cols=81 Identities=14% Similarity=0.190 Sum_probs=47.5
Q ss_pred CCCEEEEEcCC---HHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCE--EEeCCC-CcccHHHHHHHHHHHhCC
Q 017868 181 PETNVLIMGAG---PIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADN--IVKVST-NLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 181 ~g~~vlI~G~g---~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~--~~~~~~-~~~~~~~~i~~~~~~~~~ 254 (365)
.++++||+|++ ++|.++++.++ ..|++ |+.+.++++..+.++++.... .+..+- +.++..+.+.++.+. -+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la-~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g 82 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIK-DQGAT-VIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKER-VG 82 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHH-HCCCE-EEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHH-hC
Confidence 57889999874 89999999565 56995 666666544344444442211 222221 223333344443332 25
Q ss_pred CceEEEeCCC
Q 017868 255 GIDVSFDCAG 264 (365)
Q Consensus 255 ~~d~vid~~g 264 (365)
.+|+++.++|
T Consensus 83 ~iD~lv~nAg 92 (252)
T PRK06079 83 KIDGIVHAIA 92 (252)
T ss_pred CCCEEEEccc
Confidence 7999999877
No 269
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.11 E-value=0.36 Score=40.95 Aligned_cols=97 Identities=16% Similarity=0.185 Sum_probs=60.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEE---------------eCCCCcccHHH
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIV---------------KVSTNLQDIAE 243 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~---------------~~~~~~~~~~~ 243 (365)
.++.+||+.|+|. |.-++- +|. .|. .|++++.++.-.+.+ ++.+..... .+..+-.++.
T Consensus 33 ~~~~rvLd~GCG~-G~da~~-LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~- 107 (213)
T TIGR03840 33 PAGARVFVPLCGK-SLDLAW-LAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALT- 107 (213)
T ss_pred CCCCeEEEeCCCc-hhHHHH-HHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCC-
Confidence 5777999999875 777777 664 599 699999999877764 333332100 0001111110
Q ss_pred HHHHHHHHhCCCceEEEeCCC--------CHHHHHHHHHhcccCCEEEEEcc
Q 017868 244 EVEKIQKAMGTGIDVSFDCAG--------LNKTMSTALGATCAGGKVCLVGM 287 (365)
Q Consensus 244 ~i~~~~~~~~~~~d~vid~~g--------~~~~~~~~~~~l~~~G~~~~~g~ 287 (365)
......+|.|+|+.. ....+....++|+++|++.+...
T Consensus 108 ------~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 108 ------AADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred ------cccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 001246899999643 12356688899999999777654
No 270
>PRK08643 acetoin reductase; Validated
Probab=95.08 E-value=0.29 Score=42.64 Aligned_cols=81 Identities=21% Similarity=0.295 Sum_probs=47.2
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HH---cCCCE-EEeCCC-CcccHHHHHHHHHHHhCC
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KE---IGADN-IVKVST-NLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~---~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~ 254 (365)
+.++||+|+ |++|..+++.++ ..|+ .|+.+++++++.+.+ .+ .+... .+..+- +.+++.+.+.++.+. .+
T Consensus 2 ~k~~lItGas~giG~~la~~l~-~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLV-EDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDT-FG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 568899987 999999999554 5698 577777776554322 22 23221 122221 222333333333322 35
Q ss_pred CceEEEeCCCC
Q 017868 255 GIDVSFDCAGL 265 (365)
Q Consensus 255 ~~d~vid~~g~ 265 (365)
++|++|.+.|.
T Consensus 79 ~id~vi~~ag~ 89 (256)
T PRK08643 79 DLNVVVNNAGV 89 (256)
T ss_pred CCCEEEECCCC
Confidence 79999998863
No 271
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.08 E-value=1 Score=39.99 Aligned_cols=58 Identities=19% Similarity=0.377 Sum_probs=43.4
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEe--CChhHHHHHHHcCCCEEEe
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD--VDDYRLSVAKEIGADNIVK 233 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~--~~~~~~~~~~~~g~~~~~~ 233 (365)
+.+.+++|++|+=--+|..|.+.+. +++..|++.++++. -+.+|.++++.+|+.-+..
T Consensus 55 ~~G~l~pG~tIVE~TSGNTGI~LA~-vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t 114 (300)
T COG0031 55 KRGLLKPGGTIVEATSGNTGIALAM-VAAAKGYRLIIVMPETMSQERRKLLRALGAEVILT 114 (300)
T ss_pred HcCCCCCCCEEEEcCCChHHHHHHH-HHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEc
Confidence 4577999996544434777877777 88899998777763 4568899999999976544
No 272
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.07 E-value=0.31 Score=42.57 Aligned_cols=79 Identities=29% Similarity=0.283 Sum_probs=47.0
Q ss_pred EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHH---cCCCEEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868 184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKE---IGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~---~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d 257 (365)
++||+|+ +++|.++++.++ ..|+ .|+.+++++++.+. .++ .+-...+..+- +.++..+.+++..+. -+++|
T Consensus 2 ~vlItGas~gIG~aia~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~-~g~id 78 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELL-KKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWEL-LGGID 78 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHh-cCCCC
Confidence 6899987 999999999554 5598 57777777665432 222 23222232222 223333444443332 35799
Q ss_pred EEEeCCCC
Q 017868 258 VSFDCAGL 265 (365)
Q Consensus 258 ~vid~~g~ 265 (365)
++|.+.|.
T Consensus 79 ~li~naG~ 86 (259)
T PRK08340 79 ALVWNAGN 86 (259)
T ss_pred EEEECCCC
Confidence 99998873
No 273
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.07 E-value=0.29 Score=43.25 Aligned_cols=82 Identities=22% Similarity=0.222 Sum_probs=47.4
Q ss_pred CCCCEEEEEcC---CHHHHHHHHHHHHHCCCCeEEEEeCCh---hHHH-HHHHcCCCEEEeCCC-CcccHHHHHHHHHHH
Q 017868 180 GPETNVLIMGA---GPIGLVTMLGAPRAFGAPRIVIVDVDD---YRLS-VAKEIGADNIVKVST-NLQDIAEEVEKIQKA 251 (365)
Q Consensus 180 ~~g~~vlI~G~---g~~G~~ai~~l~~~~g~~~vi~v~~~~---~~~~-~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~ 251 (365)
-.+.++||+|+ +++|.++++.++ ..|++ |+.+.+++ ++.+ +.++++....+..+- +.++....++++.+.
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la-~~G~~-V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACR-AAGAE-LAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHH-HCCCE-EEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 35678999986 589999999554 56994 55555543 2222 334455322232222 223333344443332
Q ss_pred hCCCceEEEeCCC
Q 017868 252 MGTGIDVSFDCAG 264 (365)
Q Consensus 252 ~~~~~d~vid~~g 264 (365)
-+++|++|.++|
T Consensus 86 -~g~iD~lv~nAG 97 (272)
T PRK08159 86 -WGKLDFVVHAIG 97 (272)
T ss_pred -cCCCcEEEECCc
Confidence 357999999886
No 274
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.06 E-value=0.2 Score=43.59 Aligned_cols=82 Identities=18% Similarity=0.311 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
++.++||+|+ |.+|.++++.++ ..|+ .|+.+++++++.+. ++..|... .+..+- +.+++...+....+. -
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 85 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLA-QAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAE-I 85 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHh-c
Confidence 4689999987 999999999554 5699 57777777655432 22223221 121122 222333333333222 3
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|++|.+.|.
T Consensus 86 ~~~d~li~~ag~ 97 (255)
T PRK07523 86 GPIDILVNNAGM 97 (255)
T ss_pred CCCCEEEECCCC
Confidence 579999998874
No 275
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=95.06 E-value=0.24 Score=43.53 Aligned_cols=145 Identities=13% Similarity=0.201 Sum_probs=90.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC---------CcccHHHHHHHHHH
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST---------NLQDIAEEVEKIQK 250 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~---------~~~~~~~~i~~~~~ 250 (365)
.++.++|+.|.|..|+.++- .++..|+ .|-.-+....+.+..+.+|+...-.-++ -+++|...-.++..
T Consensus 162 v~pA~vlv~G~Gvagl~aia-ta~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a 239 (356)
T COG3288 162 VSPAKVLVIGAGVAGLAAIA-TAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVA 239 (356)
T ss_pred ccchhhhhhhHHHHHHHHHH-HHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHH
Confidence 46678899999999999999 9999998 6666666677778888888754322111 12333332222222
Q ss_pred HhCCCceEEEeCCCCH------HHHHHHHHhcccCCEEEEEcc-CCCCccc--cchHhhhcCcEEEeeccc-CCcHHHHH
Q 017868 251 AMGTGIDVSFDCAGLN------KTMSTALGATCAGGKVCLVGM-GHHEMTV--PLTPAAVREVDVVGVFRY-KNTWPLCL 320 (365)
Q Consensus 251 ~~~~~~d~vid~~g~~------~~~~~~~~~l~~~G~~~~~g~-~~~~~~~--~~~~~~~~~~~i~~~~~~-~~~~~~~~ 320 (365)
.--.++|+||-+.-.+ ......+..+++|..++.+.. .+++... +-.-...++++|+|..+. .+.-.++.
T Consensus 240 ~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nlp~r~a~~aS 319 (356)
T COG3288 240 EQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNLPGRLAAQAS 319 (356)
T ss_pred HHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCcchhhhhhHH
Confidence 2357899999865321 233467889999999998853 2233322 223356788999998765 33333444
Q ss_pred HHHHcC
Q 017868 321 ELLRSG 326 (365)
Q Consensus 321 ~~l~~g 326 (365)
+++..+
T Consensus 320 ~LYa~N 325 (356)
T COG3288 320 QLYATN 325 (356)
T ss_pred HHHHHH
Confidence 444433
No 276
>PLN02780 ketoreductase/ oxidoreductase
Probab=95.06 E-value=0.21 Score=45.44 Aligned_cols=40 Identities=23% Similarity=0.237 Sum_probs=31.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV 222 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~ 222 (365)
.|.++||+|+ +++|.+.+..+++ .|+ +|+.+++++++.+.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~-~G~-~Vil~~R~~~~l~~ 92 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLAR-KGL-NLVLVARNPDKLKD 92 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHH-CCC-CEEEEECCHHHHHH
Confidence 5889999997 9999999995654 599 57777888877543
No 277
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.04 E-value=0.25 Score=43.13 Aligned_cols=80 Identities=23% Similarity=0.221 Sum_probs=47.4
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCC---EEEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGAD---NIVKVST-NLQDIAEEVEKIQKAMGTG 255 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~---~~~~~~~-~~~~~~~~i~~~~~~~~~~ 255 (365)
+.++||+|+ |++|..+++.+++ .|+ .++.+++++++.+. .+++... ..+..+- +.+++.+.+.++.+. .+.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~-~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYAR-QGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAA-HGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHH-CCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHh-CCC
Confidence 358999987 9999999995654 598 57777777766543 3333211 1122222 223333333333322 246
Q ss_pred ceEEEeCCC
Q 017868 256 IDVSFDCAG 264 (365)
Q Consensus 256 ~d~vid~~g 264 (365)
+|+++.++|
T Consensus 79 id~lv~~ag 87 (257)
T PRK07024 79 PDVVIANAG 87 (257)
T ss_pred CCEEEECCC
Confidence 899999877
No 278
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.03 E-value=0.36 Score=42.12 Aligned_cols=82 Identities=21% Similarity=0.336 Sum_probs=47.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-H---HHHcCCCEE-EeCCCCc-ccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-V---AKEIGADNI-VKVSTNL-QDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~---~~~~g~~~~-~~~~~~~-~~~~~~i~~~~~~~~ 253 (365)
++.++||+|+ |.+|..++..+ ...|++ |+.+.+++++.+ . +++.+.... +..+-.+ .++.+.+.++.. ..
T Consensus 6 ~~~~vlItGasg~iG~~la~~l-~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~-~~ 82 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALEL-ARAGAA-VAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAE-RF 82 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHH-HHCCCe-EEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHH-Hc
Confidence 4679999987 99999999945 466995 666767665443 2 233443321 2222222 222222222222 13
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|++|.+.|.
T Consensus 83 ~~~d~vi~~ag~ 94 (262)
T PRK13394 83 GSVDILVSNAGI 94 (262)
T ss_pred CCCCEEEECCcc
Confidence 578999998874
No 279
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=95.02 E-value=0.43 Score=42.32 Aligned_cols=89 Identities=22% Similarity=0.275 Sum_probs=58.1
Q ss_pred EEEEEcCCHHHHHH-HHHHHHHCCCCeEEEEeCChhH--HHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868 184 NVLIMGAGPIGLVT-MLGAPRAFGAPRIVIVDVDDYR--LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260 (365)
Q Consensus 184 ~vlI~G~g~~G~~a-i~~l~~~~g~~~vi~v~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 260 (365)
+|.|.|+|.+|... .. +.+..+++.+..++.++++ .++++++|..... .++...+. ...+|+|+
T Consensus 3 rVAIIG~G~IG~~h~~~-ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~------~~~e~ll~------~~dIDaV~ 69 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYK-LLRSEHLEMVAMVGIDPESDGLARARELGVKTSA------EGVDGLLA------NPDIDIVF 69 (285)
T ss_pred EEEEEeCcHHHHHHHHH-HHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEE------CCHHHHhc------CCCCCEEE
Confidence 67899999999855 45 5555567655556655543 4677888865432 12322221 34799999
Q ss_pred eCCCCHHHHHHHHHhcccCCEEEEE
Q 017868 261 DCAGLNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 261 d~~g~~~~~~~~~~~l~~~G~~~~~ 285 (365)
++++...+...+..++..+=+++..
T Consensus 70 iaTp~~~H~e~a~~al~aGk~VIde 94 (285)
T TIGR03215 70 DATSAKAHARHARLLAELGKIVIDL 94 (285)
T ss_pred ECCCcHHHHHHHHHHHHcCCEEEEC
Confidence 9999887777777776655554443
No 280
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.02 E-value=0.81 Score=36.75 Aligned_cols=83 Identities=12% Similarity=0.099 Sum_probs=48.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 260 (365)
.|.+|||.|+|.+|..-++ .+...|++ |.+++ ++..+.+++++..... . ..+. +..-.++|+|+
T Consensus 12 ~~~~vlVvGGG~va~rka~-~Ll~~ga~-V~VIs--p~~~~~l~~l~~i~~~---~--~~~~-------~~dl~~a~lVi 75 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKAS-GLKDTGAF-VTVVS--PEICKEMKELPYITWK---Q--KTFS-------NDDIKDAHLIY 75 (157)
T ss_pred CCCEEEEECCCHHHHHHHH-HHHhCCCE-EEEEc--CccCHHHHhccCcEEE---e--cccC-------hhcCCCceEEE
Confidence 5789999999999998888 44556885 55553 3333333445422211 1 1111 11135799999
Q ss_pred eCCCCHHHHHHHHHhcccCC
Q 017868 261 DCAGLNKTMSTALGATCAGG 280 (365)
Q Consensus 261 d~~g~~~~~~~~~~~l~~~G 280 (365)
-+++... .+..+...+...
T Consensus 76 aaT~d~e-~N~~i~~~a~~~ 94 (157)
T PRK06719 76 AATNQHA-VNMMVKQAAHDF 94 (157)
T ss_pred ECCCCHH-HHHHHHHHHHHC
Confidence 9999764 454444444333
No 281
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.01 E-value=0.3 Score=39.97 Aligned_cols=33 Identities=30% Similarity=0.329 Sum_probs=27.1
Q ss_pred EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868 184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD 217 (365)
Q Consensus 184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~ 217 (365)
+|+|.|+|++|..+++.+ .+.|..++..+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~L-a~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLL-ARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHH-HHcCCCeEEEEeCCE
Confidence 489999999999999944 466998888887664
No 282
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=95.00 E-value=0.39 Score=42.84 Aligned_cols=94 Identities=22% Similarity=0.232 Sum_probs=58.7
Q ss_pred CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868 183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDY--RLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260 (365)
Q Consensus 183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 260 (365)
-++.|.|+|.+|...+..+.+..+.+.+..++.+++ ....++++|..... .++...+... .-..+|+||
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~~---~~~dIDiVf 75 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAMP---EFDDIDIVF 75 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhCc---CCCCCCEEE
Confidence 478899999999975543655556765556666554 34667888865321 2333333210 015799999
Q ss_pred eCCCCHHHHHHHHHhcccCCEEEEE
Q 017868 261 DCAGLNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 261 d~~g~~~~~~~~~~~l~~~G~~~~~ 285 (365)
++++...+...+..++..|-+++..
T Consensus 76 ~AT~a~~H~e~a~~a~eaGk~VID~ 100 (302)
T PRK08300 76 DATSAGAHVRHAAKLREAGIRAIDL 100 (302)
T ss_pred ECCCHHHHHHHHHHHHHcCCeEEEC
Confidence 9999876666666666655555544
No 283
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=95.00 E-value=0.38 Score=36.90 Aligned_cols=94 Identities=20% Similarity=0.198 Sum_probs=52.9
Q ss_pred EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh---HHHHHHHcCCCE--EEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868 184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY---RLSVAKEIGADN--IVKVSTNLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~---~~~~~~~~g~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~d 257 (365)
+|.|+|+ |.+|..+++.+.+..+.+.+.++++.++ ..+.-+-.|... +..+ .+ +.+. -..+|
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~----~~----l~~~----~~~~D 69 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT----DD----LEEL----LEEAD 69 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB----S-----HHHH----TTH-S
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc----hh----HHHh----cccCC
Confidence 6889999 9999999995655578876677766651 112222222211 1111 12 2222 23389
Q ss_pred EEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC
Q 017868 258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH 290 (365)
Q Consensus 258 ~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~ 290 (365)
++||++. ++.....++.+...|.-+.+|.++.
T Consensus 70 VvIDfT~-p~~~~~~~~~~~~~g~~~ViGTTG~ 101 (124)
T PF01113_consen 70 VVIDFTN-PDAVYDNLEYALKHGVPLVIGTTGF 101 (124)
T ss_dssp EEEEES--HHHHHHHHHHHHHHT-EEEEE-SSS
T ss_pred EEEEcCC-hHHhHHHHHHHHhCCCCEEEECCCC
Confidence 9999885 5555555565555677777776554
No 284
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=94.99 E-value=0.86 Score=40.10 Aligned_cols=100 Identities=21% Similarity=0.231 Sum_probs=59.7
Q ss_pred hcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868 176 RANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 176 ~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
...+++|++||=.|+|+ |..++. ++..++ ...|++++.++++.+.+ +.+|...+.....+..++ ..
T Consensus 66 ~l~~~~g~~VLDl~ag~-G~kt~~-la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~----~~--- 136 (264)
T TIGR00446 66 ALEPDPPERVLDMAAAP-GGKTTQ-ISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNFDGRVF----GA--- 136 (264)
T ss_pred HhCCCCcCEEEEECCCc-hHHHHH-HHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCCHHHh----hh---
Confidence 34678999988887643 444444 444433 23799999999886544 556765433322221111 11
Q ss_pred HhCCCceEEEe---CCCC-------------------------HHHHHHHHHhcccCCEEEEE
Q 017868 251 AMGTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 251 ~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~~~~ 285 (365)
....+|.|+- |+|. ...+..+++.|+++|+++..
T Consensus 137 -~~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYs 198 (264)
T TIGR00446 137 -AVPKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYS 198 (264)
T ss_pred -hccCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 1245998864 4442 12555788899999998754
No 285
>PRK05717 oxidoreductase; Validated
Probab=94.96 E-value=0.35 Score=42.15 Aligned_cols=82 Identities=26% Similarity=0.263 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~ 256 (365)
.|.++||+|+ |.+|..++..++ ..|+ .|+.++++.++.+ ..++++.. ..+..+- +..+....+.++.+. -+++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~-~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~i 85 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLI-AEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQ-FGRL 85 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHH-HcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHH-hCCC
Confidence 4678999987 999999999554 5588 5666766655433 34455432 1222221 122333333443332 2479
Q ss_pred eEEEeCCCC
Q 017868 257 DVSFDCAGL 265 (365)
Q Consensus 257 d~vid~~g~ 265 (365)
|++|.+.|.
T Consensus 86 d~li~~ag~ 94 (255)
T PRK05717 86 DALVCNAAI 94 (255)
T ss_pred CEEEECCCc
Confidence 999998873
No 286
>PRK06194 hypothetical protein; Provisional
Probab=94.95 E-value=0.36 Score=42.91 Aligned_cols=82 Identities=22% Similarity=0.333 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc---CCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI---GADN-IVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~---g~~~-~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
.+.++||+|+ |++|..+++.+ ...|+ .|+.++++.++.+ ...++ +... .+..+- +.+++.+.+..+.+. .
T Consensus 5 ~~k~vlVtGasggIG~~la~~l-~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~ 81 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIG-AALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER-F 81 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHH-HHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence 3578999987 99999999945 45698 5677777655433 22322 3221 122221 122333333333222 3
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|++|.++|.
T Consensus 82 g~id~vi~~Ag~ 93 (287)
T PRK06194 82 GAVHLLFNNAGV 93 (287)
T ss_pred CCCCEEEECCCC
Confidence 578999998874
No 287
>PRK06128 oxidoreductase; Provisional
Probab=94.95 E-value=0.82 Score=41.01 Aligned_cols=81 Identities=22% Similarity=0.256 Sum_probs=45.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh------HHHHHHHcCCCEE-EeCCC-CcccHHHHHHHHHHH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY------RLSVAKEIGADNI-VKVST-NLQDIAEEVEKIQKA 251 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~------~~~~~~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~ 251 (365)
.+.++||+|+ +++|.+++..++ ..|++ |+.+.++.+ ..+.+++.+.... +..+- +.++..+.+.++.+.
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~-~~G~~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFA-REGAD-IALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHH-HcCCE-EEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence 4679999987 999999999555 55995 444433321 1223344443321 22221 222333333333332
Q ss_pred hCCCceEEEeCCC
Q 017868 252 MGTGIDVSFDCAG 264 (365)
Q Consensus 252 ~~~~~d~vid~~g 264 (365)
-+++|++|.++|
T Consensus 132 -~g~iD~lV~nAg 143 (300)
T PRK06128 132 -LGGLDILVNIAG 143 (300)
T ss_pred -hCCCCEEEECCc
Confidence 357999999887
No 288
>PRK06172 short chain dehydrogenase; Provisional
Probab=94.95 E-value=0.34 Score=42.10 Aligned_cols=82 Identities=26% Similarity=0.346 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCC-EEEeCCCC-cccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~-~~~~~~~~-~~~~~~~i~~~~~~~~ 253 (365)
++.++||+|+ |++|..++..++ ..|+ +|+.+++++++.+ .+++.+.. ..+..+-. ..+....+....+. -
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~-~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~ 82 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFA-REGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA-Y 82 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-h
Confidence 4679999987 999999999555 5588 5777777765533 22333432 22222221 22333333333332 2
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|++|.+.|.
T Consensus 83 g~id~li~~ag~ 94 (253)
T PRK06172 83 GRLDYAFNNAGI 94 (253)
T ss_pred CCCCEEEECCCC
Confidence 478999998873
No 289
>PRK07109 short chain dehydrogenase; Provisional
Probab=94.94 E-value=0.34 Score=44.34 Aligned_cols=82 Identities=18% Similarity=0.270 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCEE-EeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADNI-VKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
.+.++||+|+ +++|..+++.+ ...|+ .|+.+++++++.+. +++.|.... +..+- +.++..+.+..+.+. -
T Consensus 7 ~~k~vlITGas~gIG~~la~~l-a~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~-~ 83 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAF-ARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE-L 83 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH-C
Confidence 4678999987 99999999945 45698 56667777766542 233454322 22221 222333333333222 2
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|++|+++|.
T Consensus 84 g~iD~lInnAg~ 95 (334)
T PRK07109 84 GPIDTWVNNAMV 95 (334)
T ss_pred CCCCEEEECCCc
Confidence 579999998873
No 290
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=94.92 E-value=0.58 Score=36.82 Aligned_cols=32 Identities=31% Similarity=0.534 Sum_probs=26.5
Q ss_pred EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
+|+|.|+|++|..++. .+-..|..++..+|.+
T Consensus 1 ~VliiG~GglGs~ia~-~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIAL-NLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHH-HHHHCCCCEEEEEcCC
Confidence 4889999999999999 5557799888888654
No 291
>PRK06179 short chain dehydrogenase; Provisional
Probab=94.92 E-value=0.12 Score=45.61 Aligned_cols=78 Identities=22% Similarity=0.295 Sum_probs=47.6
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCC-CCcccHHHHHHHHHHHhCCCceEE
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVS-TNLQDIAEEVEKIQKAMGTGIDVS 259 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~d~v 259 (365)
+.+++|+|+ |++|..+++.++ ..|+ .|++++++.++.+.. .+.. .+..+ .+.+++...++.+.+. -+.+|++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~-~~g~-~V~~~~r~~~~~~~~--~~~~-~~~~D~~d~~~~~~~~~~~~~~-~g~~d~l 77 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLA-RAGY-RVFGTSRNPARAAPI--PGVE-LLELDVTDDASVQAAVDEVIAR-AGRIDVL 77 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHH-HCCC-EEEEEeCChhhcccc--CCCe-eEEeecCCHHHHHHHHHHHHHh-CCCCCEE
Confidence 468999987 999999999555 5598 477777766554321 1222 12221 2233444444444332 3579999
Q ss_pred EeCCCC
Q 017868 260 FDCAGL 265 (365)
Q Consensus 260 id~~g~ 265 (365)
|.+.|.
T Consensus 78 i~~ag~ 83 (270)
T PRK06179 78 VNNAGV 83 (270)
T ss_pred EECCCC
Confidence 999884
No 292
>PRK07326 short chain dehydrogenase; Provisional
Probab=94.90 E-value=0.29 Score=42.01 Aligned_cols=82 Identities=26% Similarity=0.268 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC---CEEEeCC-CCcccHHHHHHHHHHHhCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGA---DNIVKVS-TNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~---~~~~~~~-~~~~~~~~~i~~~~~~~~~ 254 (365)
.+.++||+|+ |.+|..+++.++ ..|++ |+++++++++.+ +.+++.. ...+..+ .+..++.+.+++..+. .+
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~-~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 81 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALL-AEGYK-VAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA-FG 81 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-HCCCE-EEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 4678999987 999999999555 45985 777777766543 3344431 1122222 1223333344443332 24
Q ss_pred CceEEEeCCCC
Q 017868 255 GIDVSFDCAGL 265 (365)
Q Consensus 255 ~~d~vid~~g~ 265 (365)
++|++|.+.|.
T Consensus 82 ~~d~vi~~ag~ 92 (237)
T PRK07326 82 GLDVLIANAGV 92 (237)
T ss_pred CCCEEEECCCC
Confidence 79999998763
No 293
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=94.90 E-value=0.41 Score=35.38 Aligned_cols=87 Identities=17% Similarity=0.284 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 260 (365)
.|.+|||.|+|.+|..-++ .+...|+ .+.+++... +..+ +...... ..+.+. -.++++|+
T Consensus 6 ~~~~vlVvGgG~va~~k~~-~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~-----~~~~~~--------l~~~~lV~ 65 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKAR-LLLEAGA-KVTVISPEI---EFSE--GLIQLIR-----REFEED--------LDGADLVF 65 (103)
T ss_dssp TT-EEEEEEESHHHHHHHH-HHCCCTB-EEEEEESSE---HHHH--TSCEEEE-----SS-GGG--------CTTESEEE
T ss_pred CCCEEEEECCCHHHHHHHH-HHHhCCC-EEEEECCch---hhhh--hHHHHHh-----hhHHHH--------HhhheEEE
Confidence 5789999999999999999 6667798 566665553 2222 2222221 122111 35799999
Q ss_pred eCCCCHHHHHHHHHhcccCCEEEEEcc
Q 017868 261 DCAGLNKTMSTALGATCAGGKVCLVGM 287 (365)
Q Consensus 261 d~~g~~~~~~~~~~~l~~~G~~~~~g~ 287 (365)
.+++.+..-.......+..+..+....
T Consensus 66 ~at~d~~~n~~i~~~a~~~~i~vn~~D 92 (103)
T PF13241_consen 66 AATDDPELNEAIYADARARGILVNVVD 92 (103)
T ss_dssp E-SS-HHHHHHHHHHHHHTTSEEEETT
T ss_pred ecCCCHHHHHHHHHHHhhCCEEEEECC
Confidence 999987655566666666788777643
No 294
>PLN02366 spermidine synthase
Probab=94.90 E-value=0.26 Score=44.38 Aligned_cols=99 Identities=21% Similarity=0.207 Sum_probs=62.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC--------EEEeCCCCcccHHHHHHHHHHH
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD--------NIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~--------~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
...++||+.|+|. |..+.. +++..+..++.+++.+++-.+.++++-.. .+-... .|....+++.
T Consensus 90 ~~pkrVLiIGgG~-G~~~re-llk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~---~Da~~~l~~~--- 161 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLRE-IARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHI---GDGVEFLKNA--- 161 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHH-HHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEE---ChHHHHHhhc---
Confidence 4568999998765 556666 66776777899999988878877763211 111111 1222223221
Q ss_pred hCCCceEEEeCCCC----------HHHHHHHHHhcccCCEEEEEc
Q 017868 252 MGTGIDVSFDCAGL----------NKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 252 ~~~~~d~vid~~g~----------~~~~~~~~~~l~~~G~~~~~g 286 (365)
.++.+|+||--... ...+..+.++|+++|.++..+
T Consensus 162 ~~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~ 206 (308)
T PLN02366 162 PEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQA 206 (308)
T ss_pred cCCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECc
Confidence 14579999763322 234667889999999998754
No 295
>PRK07063 short chain dehydrogenase; Provisional
Probab=94.89 E-value=0.25 Score=43.21 Aligned_cols=81 Identities=26% Similarity=0.288 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc-----CCC-EEEeCCC-CcccHHHHHHHHHHH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI-----GAD-NIVKVST-NLQDIAEEVEKIQKA 251 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~-----g~~-~~~~~~~-~~~~~~~~i~~~~~~ 251 (365)
.+.++||+|+ +++|.++++.++ ..|+ .|+.+++++++.+ ..+++ +.. ..+..+- +.+++...+.++.+.
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~-~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFA-REGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4678999987 999999999555 5698 4677777766544 22332 211 1222221 223333344443332
Q ss_pred hCCCceEEEeCCC
Q 017868 252 MGTGIDVSFDCAG 264 (365)
Q Consensus 252 ~~~~~d~vid~~g 264 (365)
-+++|++|.+.|
T Consensus 84 -~g~id~li~~ag 95 (260)
T PRK07063 84 -FGPLDVLVNNAG 95 (260)
T ss_pred -hCCCcEEEECCC
Confidence 357999999887
No 296
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.89 E-value=0.33 Score=42.66 Aligned_cols=81 Identities=16% Similarity=0.188 Sum_probs=46.2
Q ss_pred CCCEEEEEcCC---HHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCC-CcccHHHHHHHHHHHh
Q 017868 181 PETNVLIMGAG---PIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVST-NLQDIAEEVEKIQKAM 252 (365)
Q Consensus 181 ~g~~vlI~G~g---~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~-~~~~~~~~i~~~~~~~ 252 (365)
.+.++||+|++ ++|.++++.++ ..|++ |+.+.+++...+.+++ .+....+..+- +.++....+.+..+.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la-~~G~~-vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~- 81 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMH-REGAE-LAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV- 81 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHH-HCCCE-EEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh-
Confidence 46789999873 79999999555 56985 6666665321222222 23222232222 223444444444332
Q ss_pred CCCceEEEeCCC
Q 017868 253 GTGIDVSFDCAG 264 (365)
Q Consensus 253 ~~~~d~vid~~g 264 (365)
-+.+|++|.++|
T Consensus 82 ~g~iD~linnAg 93 (262)
T PRK07984 82 WPKFDGFVHSIG 93 (262)
T ss_pred cCCCCEEEECCc
Confidence 357999999887
No 297
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.89 E-value=0.39 Score=41.82 Aligned_cols=81 Identities=22% Similarity=0.280 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY--RLSVAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 255 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~--~~~~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~ 255 (365)
++.++||+|+ +++|.++++.++ ..|++ |+.+.+++. ..+.+++.+... .+..+- +.++..+.+++..+. -++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~-~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~ 83 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLA-KAGAD-IVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEV-MGH 83 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCCE-EEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHH-cCC
Confidence 4688999987 999999999555 56995 555555432 123344455322 122222 223343444443332 357
Q ss_pred ceEEEeCCC
Q 017868 256 IDVSFDCAG 264 (365)
Q Consensus 256 ~d~vid~~g 264 (365)
+|+++.+.|
T Consensus 84 iD~lv~~ag 92 (251)
T PRK12481 84 IDILINNAG 92 (251)
T ss_pred CCEEEECCC
Confidence 999999887
No 298
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.88 E-value=0.34 Score=42.24 Aligned_cols=80 Identities=16% Similarity=0.237 Sum_probs=46.2
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHH----cCCCE--EEeCCCC-cccHHHHHHHHHHHh
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKE----IGADN--IVKVSTN-LQDIAEEVEKIQKAM 252 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~----~g~~~--~~~~~~~-~~~~~~~i~~~~~~~ 252 (365)
++++||+|+ |.+|.+++..++ ..|+ .++.++++.++.+. ..+ .+... .+..+-. .++....+.++.+.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~-~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~- 78 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLA-EEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEI- 78 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHH-
Confidence 468999987 999999999555 5598 57777777654432 222 22111 2222222 22233333333222
Q ss_pred CCCceEEEeCCC
Q 017868 253 GTGIDVSFDCAG 264 (365)
Q Consensus 253 ~~~~d~vid~~g 264 (365)
-+++|+++.+.|
T Consensus 79 ~~~id~vv~~ag 90 (259)
T PRK12384 79 FGRVDLLVYNAG 90 (259)
T ss_pred cCCCCEEEECCC
Confidence 257999999887
No 299
>PRK07035 short chain dehydrogenase; Provisional
Probab=94.88 E-value=0.37 Score=41.85 Aligned_cols=81 Identities=16% Similarity=0.190 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHH---cCCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKE---IGAD-NIVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~---~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
++.++||+|+ +++|.++++.+ ...|+ +|+.++++.++.+. .++ .+.. ..+..+- +..+..+.+++..+. -
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l-~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 83 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLL-AQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRER-H 83 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 3568999987 99999999945 45698 67777777665432 232 2321 1222221 222333334443332 2
Q ss_pred CCceEEEeCCC
Q 017868 254 TGIDVSFDCAG 264 (365)
Q Consensus 254 ~~~d~vid~~g 264 (365)
+.+|+++.+.|
T Consensus 84 ~~id~li~~ag 94 (252)
T PRK07035 84 GRLDILVNNAA 94 (252)
T ss_pred CCCCEEEECCC
Confidence 46899998887
No 300
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=94.88 E-value=0.48 Score=36.93 Aligned_cols=96 Identities=22% Similarity=0.274 Sum_probs=55.0
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh-------------------hHH----HHHHHcC-CCEEEeCCCC
Q 017868 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD-------------------YRL----SVAKEIG-ADNIVKVSTN 237 (365)
Q Consensus 182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~-------------------~~~----~~~~~~g-~~~~~~~~~~ 237 (365)
..+|+|.|+|++|..++..|+ ..|...+..+|.+. .|. +.++++. ...+..+..
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~-~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~- 79 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLA-RSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE- 79 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHH-HHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES-
T ss_pred CCEEEEECcCHHHHHHHHHHH-HhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec-
Confidence 468999999999999999555 55998888886542 122 2233333 222222211
Q ss_pred cccH-HHHHHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEE
Q 017868 238 LQDI-AEEVEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 238 ~~~~-~~~i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~ 285 (365)
++ .....++. .++|+||+|+.+........+.+...+.-.+.
T Consensus 80 --~~~~~~~~~~~----~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~ 122 (135)
T PF00899_consen 80 --KIDEENIEELL----KDYDIVIDCVDSLAARLLLNEICREYGIPFID 122 (135)
T ss_dssp --HCSHHHHHHHH----HTSSEEEEESSSHHHHHHHHHHHHHTT-EEEE
T ss_pred --ccccccccccc----cCCCEEEEecCCHHHHHHHHHHHHHcCCCEEE
Confidence 11 12233332 47899999998765544555555555554433
No 301
>PRK08226 short chain dehydrogenase; Provisional
Probab=94.86 E-value=0.37 Score=42.12 Aligned_cols=81 Identities=22% Similarity=0.282 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH---cCCCE-EEeCCCC-cccHHHHHHHHHHHhCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE---IGADN-IVKVSTN-LQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~---~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~~ 254 (365)
.+.++||+|+ |++|..+++.++ ..|+ .|+.++++++..+.+++ .+... .+..+-. ..+....+.++.+. .+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~-~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~ 81 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFA-RHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK-EG 81 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-HCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 4678999987 999999999554 5699 47777776654333332 23221 2222221 12233333333222 35
Q ss_pred CceEEEeCCC
Q 017868 255 GIDVSFDCAG 264 (365)
Q Consensus 255 ~~d~vid~~g 264 (365)
++|++|.+.|
T Consensus 82 ~id~vi~~ag 91 (263)
T PRK08226 82 RIDILVNNAG 91 (263)
T ss_pred CCCEEEECCC
Confidence 7999999887
No 302
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=94.86 E-value=0.56 Score=40.76 Aligned_cols=35 Identities=29% Similarity=0.447 Sum_probs=28.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
...+|+|.|+|++|..++. .+...|..++..+|.+
T Consensus 31 ~~~~VliiG~GglGs~va~-~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQ-YLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHH-HHHHcCCCEEEEEcCC
Confidence 4468999999999999999 5556799888888654
No 303
>PRK06953 short chain dehydrogenase; Provisional
Probab=94.84 E-value=0.25 Score=42.11 Aligned_cols=77 Identities=26% Similarity=0.332 Sum_probs=47.3
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHH-HHhCCCceEEE
Q 017868 183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQ-KAMGTGIDVSF 260 (365)
Q Consensus 183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~-~~~~~~~d~vi 260 (365)
+++||+|+ |.+|..+++.++ ..|+ .++.++++.++.+.++..+... +..+-.+.+ .+.++. +..+.++|+++
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~-~~G~-~v~~~~r~~~~~~~~~~~~~~~-~~~D~~~~~---~v~~~~~~~~~~~~d~vi 75 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYR-ADGW-RVIATARDAAALAALQALGAEA-LALDVADPA---SVAGLAWKLDGEALDAAV 75 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHH-hCCC-EEEEEECCHHHHHHHHhccceE-EEecCCCHH---HHHHHHHHhcCCCCCEEE
Confidence 46899987 999999999554 5588 4777778777766666555432 222222121 222221 11235799999
Q ss_pred eCCCC
Q 017868 261 DCAGL 265 (365)
Q Consensus 261 d~~g~ 265 (365)
.+.|.
T Consensus 76 ~~ag~ 80 (222)
T PRK06953 76 YVAGV 80 (222)
T ss_pred ECCCc
Confidence 98764
No 304
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=94.84 E-value=0.3 Score=40.09 Aligned_cols=80 Identities=20% Similarity=0.359 Sum_probs=49.2
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHHcCCC--EE-EeCC-CCcccHHHHHHHHHHHhCCCc
Q 017868 183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD-YRLSVAKEIGAD--NI-VKVS-TNLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~~~~~~~~g~~--~~-~~~~-~~~~~~~~~i~~~~~~~~~~~ 256 (365)
...+|.|+ +++|.+..|+++ ..|++ +++.+.+. ...+.++.++.. +. +..+ ++..+....+++..+.. +.+
T Consensus 15 k~~~vtGg~sGIGrAia~~la-~~Gar-v~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~-g~p 91 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLA-KKGAR-VAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSL-GTP 91 (256)
T ss_pred ceeEEecCCchHHHHHHHHHH-hcCcE-EEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhc-CCC
Confidence 35567776 899999999555 55994 66665554 445567888762 21 1111 22234333455554433 489
Q ss_pred eEEEeCCCC
Q 017868 257 DVSFDCAGL 265 (365)
Q Consensus 257 d~vid~~g~ 265 (365)
+++++|.|.
T Consensus 92 svlVncAGI 100 (256)
T KOG1200|consen 92 SVLVNCAGI 100 (256)
T ss_pred cEEEEcCcc
Confidence 999999994
No 305
>PRK07454 short chain dehydrogenase; Provisional
Probab=94.83 E-value=0.48 Score=40.79 Aligned_cols=83 Identities=23% Similarity=0.262 Sum_probs=48.8
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868 180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K---EIGADN-IVKVST-NLQDIAEEVEKIQKAM 252 (365)
Q Consensus 180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~---~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~ 252 (365)
..+.++||+|+ |.+|..++..++ ..|. +|+++++++++.+.+ + +.+... .+..+- +.+++...++.+.+.
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~- 80 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFA-KAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ- 80 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH-
Confidence 34578999987 999999999554 5688 577777776654332 2 223221 222222 122333333333322
Q ss_pred CCCceEEEeCCCC
Q 017868 253 GTGIDVSFDCAGL 265 (365)
Q Consensus 253 ~~~~d~vid~~g~ 265 (365)
-+++|+++.+.|.
T Consensus 81 ~~~id~lv~~ag~ 93 (241)
T PRK07454 81 FGCPDVLINNAGM 93 (241)
T ss_pred cCCCCEEEECCCc
Confidence 3469999998873
No 306
>PRK08264 short chain dehydrogenase; Validated
Probab=94.83 E-value=0.17 Score=43.56 Aligned_cols=77 Identities=21% Similarity=0.271 Sum_probs=45.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
.+.++||+|+ |.+|..+++.+ ...|+++|+.+.++.++.+. .+.. ..+..+-. +. +.+++..+. -..+|+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l-~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~--~~-~~~~~~~~~-~~~id~ 76 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQL-LARGAAKVYAAARDPESVTD---LGPRVVPLQLDVT--DP-ASVAAAAEA-ASDVTI 76 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHH-HHCCcccEEEEecChhhhhh---cCCceEEEEecCC--CH-HHHHHHHHh-cCCCCE
Confidence 4578999987 99999999945 45688557777776665432 2221 11221211 11 223333321 246899
Q ss_pred EEeCCCC
Q 017868 259 SFDCAGL 265 (365)
Q Consensus 259 vid~~g~ 265 (365)
+|.+.|.
T Consensus 77 vi~~ag~ 83 (238)
T PRK08264 77 LVNNAGI 83 (238)
T ss_pred EEECCCc
Confidence 9998875
No 307
>PLN02253 xanthoxin dehydrogenase
Probab=94.82 E-value=0.29 Score=43.35 Aligned_cols=82 Identities=22% Similarity=0.252 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC---CEEEeCCC-CcccHHHHHHHHHHHhCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGA---DNIVKVST-NLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~---~~~~~~~~-~~~~~~~~i~~~~~~~~~ 254 (365)
.+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++.+ ..++++. ...+..+- +.++..+.+....+. -+
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~-~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFH-KHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK-FG 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHH-hC
Confidence 4678999987 999999999555 5698 5677766655433 3344432 11222221 223333334443332 35
Q ss_pred CceEEEeCCCC
Q 017868 255 GIDVSFDCAGL 265 (365)
Q Consensus 255 ~~d~vid~~g~ 265 (365)
++|++|.++|.
T Consensus 94 ~id~li~~Ag~ 104 (280)
T PLN02253 94 TLDIMVNNAGL 104 (280)
T ss_pred CCCEEEECCCc
Confidence 79999998873
No 308
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.80 E-value=0.38 Score=41.97 Aligned_cols=82 Identities=17% Similarity=0.196 Sum_probs=46.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH---HHHHcCCC-EEEeCCCC-cccHHHHHHHHHHHhCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS---VAKEIGAD-NIVKVSTN-LQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~---~~~~~g~~-~~~~~~~~-~~~~~~~i~~~~~~~~~ 254 (365)
.+.++||+|+ +++|.++++.++ ..|++ ++.+.++++..+ ...+.+.. ..+..+-. .++....+.+..+. .+
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~-~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g 90 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALA-KAGAD-IIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE-FG 90 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCCE-EEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 5789999987 999999999555 56995 555555532222 23333432 12222222 22333334443332 35
Q ss_pred CceEEEeCCCC
Q 017868 255 GIDVSFDCAGL 265 (365)
Q Consensus 255 ~~d~vid~~g~ 265 (365)
++|++|.+.|.
T Consensus 91 ~id~li~~ag~ 101 (258)
T PRK06935 91 KIDILVNNAGT 101 (258)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 309
>PRK04266 fibrillarin; Provisional
Probab=94.80 E-value=0.82 Score=39.19 Aligned_cols=102 Identities=15% Similarity=0.125 Sum_probs=59.0
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
+...+++|++||=.|+|. |..+.. +++..+...|++++.+++..+.+ ++..-...+. .+..+. .....+
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~-la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~--~D~~~~-~~~~~l-- 138 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSH-VSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPIL--ADARKP-ERYAHV-- 138 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHH-HHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEE--CCCCCc-chhhhc--
Confidence 457889999998888743 444444 55555434799999998766533 2221111221 111111 000111
Q ss_pred HhCCCceEEEeCCCCHH----HHHHHHHhcccCCEEEEE
Q 017868 251 AMGTGIDVSFDCAGLNK----TMSTALGATCAGGKVCLV 285 (365)
Q Consensus 251 ~~~~~~d~vid~~g~~~----~~~~~~~~l~~~G~~~~~ 285 (365)
...+|+++.....+. .+..+.+.|+++|++++.
T Consensus 139 --~~~~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~ 175 (226)
T PRK04266 139 --VEKVDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA 175 (226)
T ss_pred --cccCCEEEECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 245999985444321 356788899999999874
No 310
>PLN03075 nicotianamine synthase; Provisional
Probab=94.80 E-value=0.27 Score=43.68 Aligned_cols=100 Identities=21% Similarity=0.250 Sum_probs=64.8
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-----CCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG-----ADNIVKVSTNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~i~~~~~~~~~ 254 (365)
.+.++|+-.|+|+.+..++.++++......++++|.+++..+.+++.- ...-+.+.. .|..+ ... ...
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~~----~~~-~l~ 194 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVMD----VTE-SLK 194 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchhh----ccc-ccC
Confidence 377899999999888877774545555557999999998887776633 212111111 11111 110 136
Q ss_pred CceEEEeCC-------CCHHHHHHHHHhcccCCEEEEEc
Q 017868 255 GIDVSFDCA-------GLNKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 255 ~~d~vid~~-------g~~~~~~~~~~~l~~~G~~~~~g 286 (365)
++|+|+-.+ .-...+.+..+.|+++|.++.-.
T Consensus 195 ~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 195 EYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred CcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 799998764 22346678889999999988653
No 311
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=94.79 E-value=0.61 Score=41.20 Aligned_cols=98 Identities=15% Similarity=0.122 Sum_probs=59.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-C-------CEEEeCCCCcccHHHHHHHHHHH
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG-A-------DNIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g-~-------~~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
...++||+.|+|. |..+.. +++......+.+++.+++-.+.++++- . ..+.... .|..+.++.
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~-ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~---~D~~~~l~~---- 141 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLRE-VLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQI---DDGFKFLAD---- 141 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHH-HHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEE---CchHHHHHh----
Confidence 3456999998755 445555 555655678999999888777766531 1 1111100 222222322
Q ss_pred hCCCceEEEeCCC----------CHHHHHHHHHhcccCCEEEEEc
Q 017868 252 MGTGIDVSFDCAG----------LNKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 252 ~~~~~d~vid~~g----------~~~~~~~~~~~l~~~G~~~~~g 286 (365)
....+|+||-... ....+..+.+.|+++|.++...
T Consensus 142 ~~~~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~~ 186 (270)
T TIGR00417 142 TENTFDVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQS 186 (270)
T ss_pred CCCCccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEcC
Confidence 2568999975322 1234567889999999998763
No 312
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=94.78 E-value=0.42 Score=49.92 Aligned_cols=138 Identities=12% Similarity=0.102 Sum_probs=78.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCC------------eEEEEeCChhHHH-HHHHc-CCCEEEeCCCCcccHHHHHH
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAP------------RIVIVDVDDYRLS-VAKEI-GADNIVKVSTNLQDIAEEVE 246 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~------------~vi~v~~~~~~~~-~~~~~-g~~~~~~~~~~~~~~~~~i~ 246 (365)
...+|+|+|+|.+|...+..+++..+++ .|.+++.+.++.+ +++.+ ++..+.. + ..+.. .+.
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~l-D--v~D~e-~L~ 643 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQL-D--VSDSE-SLL 643 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEe-e--cCCHH-HHH
Confidence 4568999999999999999676655543 3666666666655 44545 4333221 1 12332 232
Q ss_pred HHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchHhhhcCcEEEeecccCCcHHH--HHHHHH
Q 017868 247 KIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL--CLELLR 324 (365)
Q Consensus 247 ~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~l~ 324 (365)
++. .++|+|+.|+...-+...+..++..+=+++................-..++.+........-+.. +.++++
T Consensus 644 ~~v----~~~DaVIsalP~~~H~~VAkaAieaGkHvv~eky~~~e~~~L~e~Ak~AGV~~m~e~GlDPGid~~lA~~~Id 719 (1042)
T PLN02819 644 KYV----SQVDVVISLLPASCHAVVAKACIELKKHLVTASYVSEEMSALDSKAKEAGITILCEMGLDPGIDHMMAMKMID 719 (1042)
T ss_pred Hhh----cCCCEEEECCCchhhHHHHHHHHHcCCCEEECcCCHHHHHHHHHHHHHcCCEEEECCccCHHHHHHHHHHHHH
Confidence 221 35999999999876777777788777666655321111111111223355555554444333333 445555
Q ss_pred cC
Q 017868 325 SG 326 (365)
Q Consensus 325 ~g 326 (365)
++
T Consensus 720 ~~ 721 (1042)
T PLN02819 720 DA 721 (1042)
T ss_pred hh
Confidence 54
No 313
>PRK05875 short chain dehydrogenase; Provisional
Probab=94.78 E-value=0.4 Score=42.32 Aligned_cols=81 Identities=23% Similarity=0.315 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcC-----C-CEEEeCCC-CcccHHHHHHHHHHH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIG-----A-DNIVKVST-NLQDIAEEVEKIQKA 251 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g-----~-~~~~~~~~-~~~~~~~~i~~~~~~ 251 (365)
++.++||+|+ |.+|.++++.+ ...|+ .|+.+.++.++.+ ..+++. . ...+..+- +.+++.+.+++..+.
T Consensus 6 ~~k~vlItGasg~IG~~la~~l-~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGL-VAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHH-HHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3679999987 99999999944 55699 5777777765543 222221 1 11221221 122333333333322
Q ss_pred hCCCceEEEeCCC
Q 017868 252 MGTGIDVSFDCAG 264 (365)
Q Consensus 252 ~~~~~d~vid~~g 264 (365)
.+++|++|.+.|
T Consensus 84 -~~~~d~li~~ag 95 (276)
T PRK05875 84 -HGRLHGVVHCAG 95 (276)
T ss_pred -cCCCCEEEECCC
Confidence 357899999887
No 314
>PRK06138 short chain dehydrogenase; Provisional
Probab=94.78 E-value=0.31 Score=42.24 Aligned_cols=82 Identities=24% Similarity=0.253 Sum_probs=47.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc--CCC-EEEeCCCCc-ccHHHHHHHHHHHhCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI--GAD-NIVKVSTNL-QDIAEEVEKIQKAMGT 254 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~--g~~-~~~~~~~~~-~~~~~~i~~~~~~~~~ 254 (365)
++.++||+|+ |.+|..+++.++ ..|+ +++.+.++.++.+ ..+.+ +.. ..+..+-.+ ++..+.+..+.+. .+
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~-~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~-~~ 80 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFA-REGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAAR-WG 80 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHH-HCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence 3568999987 999999999555 4588 5777767665443 23332 221 222222222 2233333333322 35
Q ss_pred CceEEEeCCCC
Q 017868 255 GIDVSFDCAGL 265 (365)
Q Consensus 255 ~~d~vid~~g~ 265 (365)
++|++|.+.|.
T Consensus 81 ~id~vi~~ag~ 91 (252)
T PRK06138 81 RLDVLVNNAGF 91 (252)
T ss_pred CCCEEEECCCC
Confidence 89999998883
No 315
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=94.77 E-value=0.39 Score=42.45 Aligned_cols=81 Identities=21% Similarity=0.283 Sum_probs=47.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHH---cCCC-EEEeCCCC-cccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKE---IGAD-NIVKVSTN-LQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~---~g~~-~~~~~~~~-~~~~~~~i~~~~~~~~ 253 (365)
++.++||+|+ +++|.+++..++ ..|+ .|+.+++++++.+ +.++ .+.. ..+..+-. ..+....+.++.+. -
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~ 85 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELA-RAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED-F 85 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence 4678999987 999999999554 5699 5677777665443 2232 2322 12222221 12233333333322 3
Q ss_pred CCceEEEeCCC
Q 017868 254 TGIDVSFDCAG 264 (365)
Q Consensus 254 ~~~d~vid~~g 264 (365)
+++|++|.++|
T Consensus 86 g~id~li~~ag 96 (278)
T PRK08277 86 GPCDILINGAG 96 (278)
T ss_pred CCCCEEEECCC
Confidence 57999999887
No 316
>PRK07576 short chain dehydrogenase; Provisional
Probab=94.75 E-value=0.44 Score=41.83 Aligned_cols=81 Identities=17% Similarity=0.229 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHH---cCCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKE---IGAD-NIVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~---~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
++.++||+|+ |++|..+++.+ ...|+ .|+.+++++++.+ ..++ .+.. ..+..+- +..++...+++..+. -
T Consensus 8 ~~k~ilItGasggIG~~la~~l-~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~ 84 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAF-ARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE-F 84 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-c
Confidence 5779999987 99999999945 56698 5777777665533 2222 2322 1222222 223333444444332 2
Q ss_pred CCceEEEeCCC
Q 017868 254 TGIDVSFDCAG 264 (365)
Q Consensus 254 ~~~d~vid~~g 264 (365)
+++|++|.+.|
T Consensus 85 ~~iD~vi~~ag 95 (264)
T PRK07576 85 GPIDVLVSGAA 95 (264)
T ss_pred CCCCEEEECCC
Confidence 57999998775
No 317
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=94.74 E-value=0.63 Score=39.04 Aligned_cols=35 Identities=26% Similarity=0.454 Sum_probs=28.6
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
...+|+|.|+|++|..+++ .+.+.|...+..+|.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~-~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAI-NLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHH-HHHHcCCCEEEEECCC
Confidence 3468999999999999999 4456699888888776
No 318
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.72 E-value=0.35 Score=41.90 Aligned_cols=82 Identities=20% Similarity=0.199 Sum_probs=46.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-H---HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-V---AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~---~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
++.++||+|+ |.+|..++..++ ..|+++++...++.++.+ . ++..+... .+..+- +..+....+++..+. .
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~-~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 80 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLA-EEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEE-F 80 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 4678999987 999999999554 569865544455554432 2 23334322 222222 222333333333332 3
Q ss_pred CCceEEEeCCC
Q 017868 254 TGIDVSFDCAG 264 (365)
Q Consensus 254 ~~~d~vid~~g 264 (365)
+++|++|.+.|
T Consensus 81 ~~id~vi~~ag 91 (250)
T PRK08063 81 GRLDVFVNNAA 91 (250)
T ss_pred CCCCEEEECCC
Confidence 47999999887
No 319
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=94.72 E-value=0.3 Score=40.32 Aligned_cols=94 Identities=20% Similarity=0.283 Sum_probs=56.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 256 (365)
++++||=.|+|. |..++. ++.......+++++.+++..+.+ ++.+...+.....+..+ +. ....+
T Consensus 42 ~~~~vLDiGcGt-G~~s~~-la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~d~~~-------~~--~~~~f 110 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIP-LAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNGRAED-------FQ--HEEQF 110 (181)
T ss_pred CCCeEEEecCCC-CccHHH-HHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEecchhh-------cc--ccCCc
Confidence 378888888753 555555 44444444799999998765443 44555432222222111 11 14689
Q ss_pred eEEEeCC-C-CHHHHHHHHHhcccCCEEEEE
Q 017868 257 DVSFDCA-G-LNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 257 d~vid~~-g-~~~~~~~~~~~l~~~G~~~~~ 285 (365)
|+|+... . -+..+..+.+.|+++|.++..
T Consensus 111 D~I~s~~~~~~~~~~~~~~~~LkpgG~lvi~ 141 (181)
T TIGR00138 111 DVITSRALASLNVLLELTLNLLKVGGYFLAY 141 (181)
T ss_pred cEEEehhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence 9998643 1 133555678889999999876
No 320
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=94.71 E-value=0.83 Score=39.31 Aligned_cols=106 Identities=22% Similarity=0.373 Sum_probs=72.4
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCEEEeC-CCCcccHHHHHHHHH
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI----GADNIVKV-STNLQDIAEEVEKIQ 249 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~----g~~~~~~~-~~~~~~~~~~i~~~~ 249 (365)
...++.+|++||=.++|. |-.+.. +++..|...|+++|-++.-++.+++- +... +.+ ..+.+++.
T Consensus 45 ~~~~~~~g~~vLDva~GT-Gd~a~~-~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~dAe~LP------- 114 (238)
T COG2226 45 SLLGIKPGDKVLDVACGT-GDMALL-LAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGDAENLP------- 114 (238)
T ss_pred HhhCCCCCCEEEEecCCc-cHHHHH-HHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEechhhCC-------
Confidence 345566999999887653 888888 88888877899999999887766543 2221 111 12211111
Q ss_pred HHhCCCceEEEeCCCC------HHHHHHHHHhcccCCEEEEEccCCCC
Q 017868 250 KAMGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVGMGHHE 291 (365)
Q Consensus 250 ~~~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~~~~g~~~~~ 291 (365)
.....+|.|.-+.|- +..+..+.++|+|+|+++.+..+...
T Consensus 115 -f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p~ 161 (238)
T COG2226 115 -FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKPD 161 (238)
T ss_pred -CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCCC
Confidence 125679999876663 35777899999999999998765443
No 321
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=94.71 E-value=1.2 Score=39.91 Aligned_cols=57 Identities=19% Similarity=0.299 Sum_probs=44.0
Q ss_pred HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEe--CChhHHHHHHHcCCCEEE
Q 017868 175 RRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVD--VDDYRLSVAKEIGADNIV 232 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~--~~~~~~~~~~~~g~~~~~ 232 (365)
..+.+.||.++||-.. |..|...+. ++...|++.++++. .+.+|+..+++||+.-+.
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~-~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~ 155 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAY-MAALRGYKCIITMPEKMSKEKRILLRALGAEIIL 155 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHH-HHHHcCceEEEEechhhhHHHHHHHHHcCCEEEe
Confidence 4578999999999875 778887777 88899996555552 335788899999987554
No 322
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=94.70 E-value=0.7 Score=40.59 Aligned_cols=35 Identities=23% Similarity=0.432 Sum_probs=28.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
.+.+|+|.|+|++|..++. .+-+.|...+..+|.+
T Consensus 29 ~~s~VlVvG~GGVGs~vae-~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAE-ALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEECcCHHHHHHHH-HHHHcCCCEEEEEeCC
Confidence 4568999999999999999 5556698888888755
No 323
>PRK04457 spermidine synthase; Provisional
Probab=94.70 E-value=0.92 Score=39.88 Aligned_cols=97 Identities=15% Similarity=0.150 Sum_probs=63.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc-CCC----EEEeCCCCcccHHHHHHHHHHHhCC
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI-GAD----NIVKVSTNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~-g~~----~~~~~~~~~~~~~~~i~~~~~~~~~ 254 (365)
.+..+||+.|+|+ |..+.. +++......+++++.+++-.+.+++. +.. .+.... .|..+.++. ...
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~-l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~---~Da~~~l~~----~~~ 135 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKF-IYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE---ADGAEYIAV----HRH 135 (262)
T ss_pred CCCCEEEEECCCH-hHHHHH-HHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE---CCHHHHHHh----CCC
Confidence 4567899998865 666666 65565555799999999999888764 321 121111 233333432 246
Q ss_pred CceEEEe-CCC---------CHHHHHHHHHhcccCCEEEEE
Q 017868 255 GIDVSFD-CAG---------LNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 255 ~~d~vid-~~g---------~~~~~~~~~~~l~~~G~~~~~ 285 (365)
.+|+|+- +.. ....+..+.++|+++|.++..
T Consensus 136 ~yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin 176 (262)
T PRK04457 136 STDVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN 176 (262)
T ss_pred CCCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence 7999973 221 135677889999999999874
No 324
>PRK12743 oxidoreductase; Provisional
Probab=94.68 E-value=0.41 Score=41.75 Aligned_cols=81 Identities=19% Similarity=0.190 Sum_probs=45.7
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCC
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~ 254 (365)
+.++||+|+ +++|..+++.++ ..|+++++...++.++.+ .++..+... .+..+- +..+....+.++.+. -+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~-~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLA-QQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQR-LG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence 468999987 999999999555 569965444444444332 223345322 222222 222333333333332 35
Q ss_pred CceEEEeCCC
Q 017868 255 GIDVSFDCAG 264 (365)
Q Consensus 255 ~~d~vid~~g 264 (365)
++|++|.+.|
T Consensus 80 ~id~li~~ag 89 (256)
T PRK12743 80 RIDVLVNNAG 89 (256)
T ss_pred CCCEEEECCC
Confidence 7999999887
No 325
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=94.66 E-value=0.46 Score=41.47 Aligned_cols=82 Identities=22% Similarity=0.283 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK----EIGADN-IVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~----~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
++.++||+|+ |.+|..+++.++ ..|+ .|+.++++.++.+... ..+... .+..+- +.+++.+.+.++.+. .
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~-~ 87 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALG-EAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER-F 87 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-h
Confidence 4679999987 999999999555 5698 5777777766554332 223221 222222 122333333333322 2
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
.++|.+|.++|.
T Consensus 88 ~~id~vi~~ag~ 99 (259)
T PRK08213 88 GHVDILVNNAGA 99 (259)
T ss_pred CCCCEEEECCCC
Confidence 579999998873
No 326
>PRK07890 short chain dehydrogenase; Provisional
Probab=94.65 E-value=0.45 Score=41.42 Aligned_cols=82 Identities=21% Similarity=0.160 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc---CCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI---GAD-NIVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
++.++||+|+ +++|..++..++ ..|+ +|+.+++++++.+.+ +++ +.. ..+..+- +.+++...+....+. -
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 80 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAA-RAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALER-F 80 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH-c
Confidence 5678999987 999999999554 6698 577777776654332 222 321 1222222 223333333333332 2
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+.+|++|.+.|.
T Consensus 81 g~~d~vi~~ag~ 92 (258)
T PRK07890 81 GRVDALVNNAFR 92 (258)
T ss_pred CCccEEEECCcc
Confidence 478999998863
No 327
>PRK06482 short chain dehydrogenase; Provisional
Probab=94.63 E-value=0.38 Score=42.51 Aligned_cols=80 Identities=21% Similarity=0.180 Sum_probs=47.6
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868 183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADN-IVKVST-NLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
.++||+|+ |.+|..+++.++ ..|. .|+++.+++++.+.+++ ++... .+..+- +..++.+.+.++.+. ..++|+
T Consensus 3 k~vlVtGasg~IG~~la~~L~-~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~ 79 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLL-ARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAA-LGRIDV 79 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 57999987 999999998554 5588 57777777776654433 33211 111111 222333334433322 357899
Q ss_pred EEeCCCC
Q 017868 259 SFDCAGL 265 (365)
Q Consensus 259 vid~~g~ 265 (365)
+|.++|.
T Consensus 80 vi~~ag~ 86 (276)
T PRK06482 80 VVSNAGY 86 (276)
T ss_pred EEECCCC
Confidence 9998873
No 328
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=94.60 E-value=1.5 Score=37.32 Aligned_cols=92 Identities=13% Similarity=0.050 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC-hhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD-DYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 259 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 259 (365)
++.+|||.|+|.++.-=+. .+...|++ |.++... .+....+.+.+-...+ .. ++... + -.++++|
T Consensus 24 ~~~~VLVVGGG~VA~RK~~-~Ll~~gA~-VtVVap~i~~el~~l~~~~~i~~~---~r--~~~~~--d-----l~g~~LV 89 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGK-TFLKKGCY-VYILSKKFSKEFLDLKKYGNLKLI---KG--NYDKE--F-----IKDKHLI 89 (223)
T ss_pred CCCEEEEECCCHHHHHHHH-HHHhCCCE-EEEEcCCCCHHHHHHHhCCCEEEE---eC--CCChH--H-----hCCCcEE
Confidence 5679999999999988777 44457985 4444322 1222222222322222 11 22111 1 1579999
Q ss_pred EeCCCCHHHHHHHHHhcccCCEEEEEc
Q 017868 260 FDCAGLNKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 260 id~~g~~~~~~~~~~~l~~~G~~~~~g 286 (365)
|-|++.+..-..........+.++...
T Consensus 90 iaATdD~~vN~~I~~~a~~~~~lvn~v 116 (223)
T PRK05562 90 VIATDDEKLNNKIRKHCDRLYKLYIDC 116 (223)
T ss_pred EECCCCHHHHHHHHHHHHHcCCeEEEc
Confidence 999998744334444444446555543
No 329
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.59 E-value=0.44 Score=43.93 Aligned_cols=35 Identities=31% Similarity=0.490 Sum_probs=29.3
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
...+|||.|+|++|..++. .+...|..++..+|.+
T Consensus 27 ~~~~VlivG~GGlGs~~a~-~La~~Gvg~i~lvD~D 61 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALL-YLAGAGVGHITIIDDD 61 (355)
T ss_pred hCCeEEEECCCHHHHHHHH-HHHHcCCCeEEEEeCC
Confidence 3468999999999999999 5557799999888765
No 330
>PRK06141 ornithine cyclodeaminase; Validated
Probab=94.58 E-value=1.1 Score=40.51 Aligned_cols=100 Identities=17% Similarity=0.153 Sum_probs=62.4
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc---CCCEEEeCCCCcccHHHHHHHHHH
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI---GADNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~---g~~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
+...-....+++|.|+|..|.+.+..++...+.+.+.+.++++++.+ +++++ +.. +... .+..+.+
T Consensus 118 ~~La~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~----~~~~~av----- 187 (314)
T PRK06141 118 SYLARKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVV----TDLEAAV----- 187 (314)
T ss_pred HHhCCCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEe----CCHHHHH-----
Confidence 43333556789999999999988874555567778888888887755 44554 322 2211 1222211
Q ss_pred HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC
Q 017868 251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 288 (365)
Q Consensus 251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~ 288 (365)
...|+|+.++.+...+ ..-..++++-++..+|..
T Consensus 188 ---~~aDIVi~aT~s~~pv-l~~~~l~~g~~i~~ig~~ 221 (314)
T PRK06141 188 ---RQADIISCATLSTEPL-VRGEWLKPGTHLDLVGNF 221 (314)
T ss_pred ---hcCCEEEEeeCCCCCE-ecHHHcCCCCEEEeeCCC
Confidence 4789999988764211 112567887776666643
No 331
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=94.55 E-value=0.79 Score=41.75 Aligned_cols=95 Identities=17% Similarity=0.177 Sum_probs=61.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc----CCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI----GADNIVKVSTNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~----g~~~~~~~~~~~~~~~~~i~~~~~~~~~ 254 (365)
+...+++|.|+|..+.+.+..++...+++.+.+..++.+|.+ +++++ +.. +..+ .+..+.+ .
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~----~~~~~av--------~ 193 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA----TDPRAAM--------S 193 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe----CCHHHHh--------c
Confidence 455689999999999988885555678888888888887765 44444 432 2211 1222222 4
Q ss_pred CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC
Q 017868 255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 288 (365)
Q Consensus 255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~ 288 (365)
..|+|+.|+.....+ .....++++-++..+|..
T Consensus 194 ~aDiVvtaT~s~~p~-i~~~~l~~g~~i~~vg~~ 226 (326)
T TIGR02992 194 GADIIVTTTPSETPI-LHAEWLEPGQHVTAMGSD 226 (326)
T ss_pred cCCEEEEecCCCCcE-ecHHHcCCCcEEEeeCCC
Confidence 799999998764211 123467887777777643
No 332
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=94.55 E-value=0.7 Score=39.69 Aligned_cols=34 Identities=32% Similarity=0.447 Sum_probs=28.0
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
..+|+|.|+|++|..++. .+...|..++..+|.+
T Consensus 21 ~~~VlivG~GglGs~va~-~La~~Gvg~i~lvD~D 54 (228)
T cd00757 21 NARVLVVGAGGLGSPAAE-YLAAAGVGKLGLVDDD 54 (228)
T ss_pred CCcEEEECCCHHHHHHHH-HHHHcCCCEEEEEcCC
Confidence 468999999999999999 5556799888888543
No 333
>PRK06125 short chain dehydrogenase; Provisional
Probab=94.54 E-value=0.44 Score=41.61 Aligned_cols=79 Identities=25% Similarity=0.337 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCC-EEEeCCCCcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI----GAD-NIVKVSTNLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~----g~~-~~~~~~~~~~~~~~~i~~~~~~~~ 253 (365)
.+.++||.|+ +++|..+++.++ ..|+ .|+.+++++++.+.+ +++ +.. ..+..+- .+. +.++++.+. -
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~--~~~-~~~~~~~~~-~ 79 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFA-AEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDL--SSP-EAREQLAAE-A 79 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecC--CCH-HHHHHHHHH-h
Confidence 4689999987 899999999554 5699 677777776654432 222 321 1222222 122 223333332 2
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|++|.+.|.
T Consensus 80 g~id~lv~~ag~ 91 (259)
T PRK06125 80 GDIDILVNNAGA 91 (259)
T ss_pred CCCCEEEECCCC
Confidence 579999998873
No 334
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.53 E-value=0.52 Score=40.78 Aligned_cols=81 Identities=19% Similarity=0.296 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
++.++||+|+ |.+|..++..+ ...|+ .|+.++++.++.+.+ ++.+.. ..+..+- +.+++.+.++.+.+. -
T Consensus 2 ~~~~ilItGas~~iG~~la~~l-~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~ 78 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRF-AEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA-L 78 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHH-HHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 4678999987 99999999945 45688 566676666554322 222321 1222222 122333333333322 3
Q ss_pred CCceEEEeCCC
Q 017868 254 TGIDVSFDCAG 264 (365)
Q Consensus 254 ~~~d~vid~~g 264 (365)
.++|++|.+.|
T Consensus 79 ~~~d~vi~~ag 89 (250)
T TIGR03206 79 GPVDVLVNNAG 89 (250)
T ss_pred CCCCEEEECCC
Confidence 57899999887
No 335
>PRK08328 hypothetical protein; Provisional
Probab=94.52 E-value=0.46 Score=40.87 Aligned_cols=35 Identities=26% Similarity=0.435 Sum_probs=28.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
.+.+|+|.|+|++|..+++ .+...|..++..+|.+
T Consensus 26 ~~~~VlIiG~GGlGs~ia~-~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAY-YLAAAGVGRILLIDEQ 60 (231)
T ss_pred hCCcEEEECCCHHHHHHHH-HHHHcCCCEEEEEcCC
Confidence 3468999999999999999 5556799988888644
No 336
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=94.52 E-value=0.42 Score=41.55 Aligned_cols=81 Identities=26% Similarity=0.373 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHH---cCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKE---IGADN-IVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~---~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
.+.++||+|+ |.+|...++.++ ..|+ .++.+++++++.+. ..+ .+... .+..+- +..++.+.+..+.+. .
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~-~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~ 79 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALA-KEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET-F 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 3578999987 999999999554 5598 56777777665432 222 23221 222222 222333333333222 3
Q ss_pred CCceEEEeCCC
Q 017868 254 TGIDVSFDCAG 264 (365)
Q Consensus 254 ~~~d~vid~~g 264 (365)
.++|++|.++|
T Consensus 80 ~~~d~vi~~a~ 90 (258)
T PRK12429 80 GGVDILVNNAG 90 (258)
T ss_pred CCCCEEEECCC
Confidence 57999999886
No 337
>PRK07856 short chain dehydrogenase; Provisional
Probab=94.52 E-value=0.4 Score=41.71 Aligned_cols=77 Identities=22% Similarity=0.222 Sum_probs=45.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d 257 (365)
.+.++||+|+ |++|.++++.++ ..|+ .|+.+++++++ +..+.. ..+..+- +.+++.+.+..+.+. .+.+|
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~-~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id 77 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFL-AAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVER-HGRLD 77 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence 4688999987 999999999554 5698 56677666554 112221 1222221 222333333333332 35789
Q ss_pred EEEeCCC
Q 017868 258 VSFDCAG 264 (365)
Q Consensus 258 ~vid~~g 264 (365)
++|.+.|
T Consensus 78 ~vi~~ag 84 (252)
T PRK07856 78 VLVNNAG 84 (252)
T ss_pred EEEECCC
Confidence 9999887
No 338
>PRK05876 short chain dehydrogenase; Provisional
Probab=94.51 E-value=0.34 Score=42.94 Aligned_cols=81 Identities=27% Similarity=0.325 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHH---cCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKE---IGADN-IVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~---~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
.+.++||+|+ +++|.+++..+ ...|++ |+.+++++++.+ ..++ .+... .+..+- +..++.+.+.+..+. -
T Consensus 5 ~~k~vlVTGas~gIG~ala~~L-a~~G~~-Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~ 81 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEF-ARRGAR-VVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL-L 81 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHH-HHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH-c
Confidence 4678999987 99999999945 456994 666767665543 2222 23321 122221 222333333333322 3
Q ss_pred CCceEEEeCCC
Q 017868 254 TGIDVSFDCAG 264 (365)
Q Consensus 254 ~~~d~vid~~g 264 (365)
+++|++|.+.|
T Consensus 82 g~id~li~nAg 92 (275)
T PRK05876 82 GHVDVVFSNAG 92 (275)
T ss_pred CCCCEEEECCC
Confidence 57999999887
No 339
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=94.51 E-value=0.53 Score=41.37 Aligned_cols=104 Identities=18% Similarity=0.192 Sum_probs=64.2
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHc-C------CCEEEeCCCCcccHHHHHH
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKEI-G------ADNIVKVSTNLQDIAEEVE 246 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~~-g------~~~~~~~~~~~~~~~~~i~ 246 (365)
+...++++++||-.|+|. |..+.. +++..+. ..|+++|.+++-.+.+++. . ...+.....+..++
T Consensus 67 ~~~~~~~~~~VLDlGcGt-G~~~~~-la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~l----- 139 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCGS-GDLAFL-LSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATDL----- 139 (261)
T ss_pred HHhCCCCCCEEEEECCcC-CHHHHH-HHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccccC-----
Confidence 445778899999998754 555555 6665553 3799999999887776542 1 11111111111111
Q ss_pred HHHHHhCCCceEEEeCCC------CHHHHHHHHHhcccCCEEEEEccC
Q 017868 247 KIQKAMGTGIDVSFDCAG------LNKTMSTALGATCAGGKVCLVGMG 288 (365)
Q Consensus 247 ~~~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~~~~g~~ 288 (365)
......+|.|+-..+ ....+..+.+.|+++|++++....
T Consensus 140 ---p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~ 184 (261)
T PLN02233 140 ---PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN 184 (261)
T ss_pred ---CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence 011356999976432 134677899999999999887544
No 340
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.50 E-value=0.5 Score=41.32 Aligned_cols=81 Identities=16% Similarity=0.186 Sum_probs=45.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEE-eCChhHHH-HHHH----cCCC-EEEeCCC-CcccHHHHHHHHHHH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIV-DVDDYRLS-VAKE----IGAD-NIVKVST-NLQDIAEEVEKIQKA 251 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v-~~~~~~~~-~~~~----~g~~-~~~~~~~-~~~~~~~~i~~~~~~ 251 (365)
+++++||+|+ +++|.+++..++ ..|++ |+.+ .+++++.+ ..++ .+.. ..+..+- +.++..+.+.++.+.
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~-~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFA-QSGVN-IAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCCE-EEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 5789999987 999999999555 56995 4444 34444432 2222 2322 1222222 223333334433332
Q ss_pred hCCCceEEEeCCC
Q 017868 252 MGTGIDVSFDCAG 264 (365)
Q Consensus 252 ~~~~~d~vid~~g 264 (365)
-+.+|+++.++|
T Consensus 85 -~g~id~lv~nAg 96 (260)
T PRK08416 85 -FDRVDFFISNAI 96 (260)
T ss_pred -cCCccEEEECcc
Confidence 357999999875
No 341
>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B.
Probab=94.50 E-value=0.052 Score=27.78 Aligned_cols=22 Identities=14% Similarity=0.228 Sum_probs=16.2
Q ss_pred ceeEEEecCCceEEEEecCCCC
Q 017868 18 NMAAWLLGVNTLKIQPFELPSL 39 (365)
Q Consensus 18 ~~~~~~~~~~~l~~~~~~~p~~ 39 (365)
|+|+++.++++++++++|.|.+
T Consensus 1 MkAv~y~G~~~v~ve~VpdP~I 22 (23)
T PF13823_consen 1 MKAVVYHGPKDVRVEEVPDPKI 22 (23)
T ss_dssp -EEEEEEETTEEEEEEE----S
T ss_pred CcceEEeCCCceEEEECCCccc
Confidence 7899999999999999999976
No 342
>PRK08251 short chain dehydrogenase; Provisional
Probab=94.49 E-value=0.58 Score=40.48 Aligned_cols=80 Identities=20% Similarity=0.276 Sum_probs=47.0
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc-----CCC-EEEeCCC-CcccHHHHHHHHHHHh
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI-----GAD-NIVKVST-NLQDIAEEVEKIQKAM 252 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~-----g~~-~~~~~~~-~~~~~~~~i~~~~~~~ 252 (365)
+.++||+|+ |++|..+++.++ ..|+ +++.+++++++.+.+ ..+ +.. ..+..+- +.+++.+.++++.+.
T Consensus 2 ~k~vlItGas~giG~~la~~l~-~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~- 78 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFA-AKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDE- 78 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHH-HcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHH-
Confidence 467999987 999999999565 4587 577777777665432 211 211 1222222 222333344443332
Q ss_pred CCCceEEEeCCC
Q 017868 253 GTGIDVSFDCAG 264 (365)
Q Consensus 253 ~~~~d~vid~~g 264 (365)
-+++|++|.+.|
T Consensus 79 ~~~id~vi~~ag 90 (248)
T PRK08251 79 LGGLDRVIVNAG 90 (248)
T ss_pred cCCCCEEEECCC
Confidence 357999999886
No 343
>PRK06197 short chain dehydrogenase; Provisional
Probab=94.48 E-value=0.33 Score=43.69 Aligned_cols=81 Identities=23% Similarity=0.319 Sum_probs=46.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc-----CCC-EEEeCCC-CcccHHHHHHHHHHH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEI-----GAD-NIVKVST-NLQDIAEEVEKIQKA 251 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~-----g~~-~~~~~~~-~~~~~~~~i~~~~~~ 251 (365)
.+.++||+|+ |++|.++++.++ ..|+ .++.+.++.++.+. .+++ +.. ..+..+- +.++..+.+.++.+.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~-~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALA-AKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence 5678999987 999999999555 5598 56666676655432 2222 111 1222222 222333333333221
Q ss_pred hCCCceEEEeCCC
Q 017868 252 MGTGIDVSFDCAG 264 (365)
Q Consensus 252 ~~~~~d~vid~~g 264 (365)
-+++|++|.++|
T Consensus 93 -~~~iD~li~nAg 104 (306)
T PRK06197 93 -YPRIDLLINNAG 104 (306)
T ss_pred -CCCCCEEEECCc
Confidence 357999999887
No 344
>PRK06114 short chain dehydrogenase; Provisional
Probab=94.47 E-value=0.55 Score=40.90 Aligned_cols=82 Identities=16% Similarity=0.283 Sum_probs=46.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh-H-HHH---HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHh
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY-R-LSV---AKEIGADN-IVKVST-NLQDIAEEVEKIQKAM 252 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~-~-~~~---~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~ 252 (365)
++.++||+|+ +++|.++++.+ ...|++ ++.++++++ . .+. ++..+... .+..+- +.++..+.+.+..+.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l-~~~G~~-v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~- 83 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGL-AQAGAD-VALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE- 83 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHH-HHCCCE-EEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-
Confidence 4678999987 99999999955 456984 556655432 2 222 23334221 222222 222333344443332
Q ss_pred CCCceEEEeCCCC
Q 017868 253 GTGIDVSFDCAGL 265 (365)
Q Consensus 253 ~~~~d~vid~~g~ 265 (365)
-+++|++|.+.|.
T Consensus 84 ~g~id~li~~ag~ 96 (254)
T PRK06114 84 LGALTLAVNAAGI 96 (254)
T ss_pred cCCCCEEEECCCC
Confidence 3579999998873
No 345
>PRK09242 tropinone reductase; Provisional
Probab=94.46 E-value=0.59 Score=40.74 Aligned_cols=82 Identities=22% Similarity=0.261 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc-----CCCE-EEeCCC-CcccHHHHHHHHHHH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEI-----GADN-IVKVST-NLQDIAEEVEKIQKA 251 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~-----g~~~-~~~~~~-~~~~~~~~i~~~~~~ 251 (365)
.+.++||+|+ +++|..++..+ ...|+ .|+.+.+++++.+. ..++ +... .+..+- +..+....+.++.+.
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l-~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREF-LGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHH-HHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4678999987 99999999955 45698 46777677665432 2222 2211 122121 222333333333332
Q ss_pred hCCCceEEEeCCCC
Q 017868 252 MGTGIDVSFDCAGL 265 (365)
Q Consensus 252 ~~~~~d~vid~~g~ 265 (365)
-+++|+++.+.|.
T Consensus 86 -~g~id~li~~ag~ 98 (257)
T PRK09242 86 -WDGLHILVNNAGG 98 (257)
T ss_pred -cCCCCEEEECCCC
Confidence 3579999999874
No 346
>PLN03139 formate dehydrogenase; Provisional
Probab=94.45 E-value=0.68 Score=43.03 Aligned_cols=91 Identities=20% Similarity=0.213 Sum_probs=60.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 260 (365)
.|.+|.|+|.|.+|..+++ .++.+|. .+++.+++....+..++.|+... .++.+.+ ...|+|+
T Consensus 198 ~gktVGIVG~G~IG~~vA~-~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell--------~~sDvV~ 260 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQ-RLKPFNC-NLLYHDRLKMDPELEKETGAKFE-------EDLDAML--------PKCDVVV 260 (386)
T ss_pred CCCEEEEEeecHHHHHHHH-HHHHCCC-EEEEECCCCcchhhHhhcCceec-------CCHHHHH--------hhCCEEE
Confidence 6789999999999999999 7788999 57778776544445555554321 1222222 3478888
Q ss_pred eCCCCHHHHH-----HHHHhcccCCEEEEEccC
Q 017868 261 DCAGLNKTMS-----TALGATCAGGKVCLVGMG 288 (365)
Q Consensus 261 d~~g~~~~~~-----~~~~~l~~~G~~~~~g~~ 288 (365)
-+........ ..+..|+++..++..+..
T Consensus 261 l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG 293 (386)
T PLN03139 261 INTPLTEKTRGMFNKERIAKMKKGVLIVNNARG 293 (386)
T ss_pred EeCCCCHHHHHHhCHHHHhhCCCCeEEEECCCC
Confidence 7665322222 467788888877777543
No 347
>PRK06181 short chain dehydrogenase; Provisional
Probab=94.43 E-value=0.61 Score=40.77 Aligned_cols=80 Identities=25% Similarity=0.367 Sum_probs=46.2
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-H---HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868 183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-A---KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 255 (365)
Q Consensus 183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~---~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~ 255 (365)
.++||+|+ |.+|..+++ .+...|+ .|+.+++++++.+. . +..+... .+..+- +.+++...+.+..+. -++
T Consensus 2 ~~vlVtGasg~iG~~la~-~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 78 (263)
T PRK06181 2 KVVIITGASEGIGRALAV-RLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVAR-FGG 78 (263)
T ss_pred CEEEEecCCcHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence 57999987 999999999 4456688 57777777655432 2 2233321 122221 122233333333222 247
Q ss_pred ceEEEeCCCC
Q 017868 256 IDVSFDCAGL 265 (365)
Q Consensus 256 ~d~vid~~g~ 265 (365)
+|++|.+.|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 9999998873
No 348
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.42 E-value=0.55 Score=40.35 Aligned_cols=82 Identities=23% Similarity=0.300 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCEEE-eCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADNIV-KVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~~~-~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
++.++||+|+ |.+|..+++.++ ..|++ |+.+.+++++.+. ++..+....+ ..+- +..++.+.+.++... -
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~-~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 80 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLA-ADGAK-VVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEA-F 80 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-HCCCE-EEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH-h
Confidence 3568999987 999999999554 56985 7777777765432 2333432221 1111 223333444433322 2
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
.++|.++.++|.
T Consensus 81 ~~id~vi~~ag~ 92 (246)
T PRK05653 81 GALDILVNNAGI 92 (246)
T ss_pred CCCCEEEECCCc
Confidence 578999998864
No 349
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=94.41 E-value=0.32 Score=43.36 Aligned_cols=46 Identities=15% Similarity=0.226 Sum_probs=33.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh---hHH-HHHHHcC
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD---YRL-SVAKEIG 227 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~---~~~-~~~~~~g 227 (365)
++.++||.|+|+.+.+++. .+...|++.+.++.+++ +|. ++++.++
T Consensus 123 ~~k~vlvlGaGGaarAi~~-~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~ 172 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGA-QGAIEGLKEIKLFNRRDEFFDKALAFAQRVN 172 (288)
T ss_pred CCCEEEEECCcHHHHHHHH-HHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence 5679999999988988777 55567998888888874 343 3445554
No 350
>PRK06398 aldose dehydrogenase; Validated
Probab=94.39 E-value=0.29 Score=42.84 Aligned_cols=75 Identities=16% Similarity=0.301 Sum_probs=44.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
.|.++||+|+ +++|.+++..+ ...|+ +|+.+++++.+.. .. ..+..+- +..+..+.+.+..+. -+.+|+
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l-~~~G~-~Vi~~~r~~~~~~-----~~-~~~~~D~~~~~~i~~~~~~~~~~-~~~id~ 75 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRL-KEEGS-NVINFDIKEPSYN-----DV-DYFKVDVSNKEQVIKGIDYVISK-YGRIDI 75 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHH-HHCCC-eEEEEeCCccccC-----ce-EEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 4679999987 99999999944 55698 5666666554321 11 1122222 223333444444332 357999
Q ss_pred EEeCCC
Q 017868 259 SFDCAG 264 (365)
Q Consensus 259 vid~~g 264 (365)
+|.+.|
T Consensus 76 li~~Ag 81 (258)
T PRK06398 76 LVNNAG 81 (258)
T ss_pred EEECCC
Confidence 999887
No 351
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=94.36 E-value=0.76 Score=40.19 Aligned_cols=98 Identities=19% Similarity=0.246 Sum_probs=65.2
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~ 253 (365)
+......++.+||=.|+|. |..+.. +++......+++++.++.-.+.+++.+.... . .+. .++. ..
T Consensus 22 l~~l~~~~~~~vLDlGcG~-G~~~~~-l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~-~-----~d~----~~~~--~~ 87 (255)
T PRK14103 22 LARVGAERARRVVDLGCGP-GNLTRY-LARRWPGAVIEALDSSPEMVAAARERGVDAR-T-----GDV----RDWK--PK 87 (255)
T ss_pred HHhCCCCCCCEEEEEcCCC-CHHHHH-HHHHCCCCEEEEEECCHHHHHHHHhcCCcEE-E-----cCh----hhCC--CC
Confidence 3455667889999898865 666666 6555432379999999998888877665432 1 121 1111 13
Q ss_pred CCceEEEeCCC-----C-HHHHHHHHHhcccCCEEEEE
Q 017868 254 TGIDVSFDCAG-----L-NKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 254 ~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~~~~ 285 (365)
..+|+|+.... . ...+..+.+.|+++|.+++.
T Consensus 88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred CCceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 57999987432 1 34566788999999998865
No 352
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=94.35 E-value=0.23 Score=42.84 Aligned_cols=105 Identities=24% Similarity=0.340 Sum_probs=60.6
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHH
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQ 249 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~ 249 (365)
+....++|++||=.|+|. |..+.. +++..+. ..|+++|.+++-.+.+++ .+...+.-...+.+++.
T Consensus 41 ~~~~~~~g~~vLDv~~Gt-G~~~~~-l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp------- 111 (233)
T PF01209_consen 41 KLLGLRPGDRVLDVACGT-GDVTRE-LARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLP------- 111 (233)
T ss_dssp HHHT--S--EEEEET-TT-SHHHHH-HGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB---------
T ss_pred hccCCCCCCEEEEeCCCh-HHHHHH-HHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhc-------
Confidence 445678999999887654 666667 6666653 379999999987766543 23322211122223321
Q ss_pred HHhCCCceEEEeCCCC------HHHHHHHHHhcccCCEEEEEccCC
Q 017868 250 KAMGTGIDVSFDCAGL------NKTMSTALGATCAGGKVCLVGMGH 289 (365)
Q Consensus 250 ~~~~~~~d~vid~~g~------~~~~~~~~~~l~~~G~~~~~g~~~ 289 (365)
.....+|.|.-+.|- ...+....++|+|||+++++....
T Consensus 112 -~~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~ 156 (233)
T PF01209_consen 112 -FPDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSK 156 (233)
T ss_dssp -S-TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred -CCCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccC
Confidence 114679999976663 356778999999999999886543
No 353
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=94.35 E-value=0.16 Score=44.00 Aligned_cols=109 Identities=26% Similarity=0.386 Sum_probs=62.5
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHH
Q 017868 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKI 248 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~ 248 (365)
+...++.||++||=.|.|+ |.++.. +++..| -.+|+..+.++++.+.+ +..|....+.+.. .|..+.- +
T Consensus 33 ~~~l~i~pG~~VlEaGtGS-G~lt~~-l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~--~Dv~~~g--~ 106 (247)
T PF08704_consen 33 LMRLDIRPGSRVLEAGTGS-GSLTHA-LARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHH--RDVCEEG--F 106 (247)
T ss_dssp HHHTT--TT-EEEEE--TT-SHHHHH-HHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEE--S-GGCG----
T ss_pred HHHcCCCCCCEEEEecCCc-HHHHHH-HHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEe--cceeccc--c
Confidence 4568899999999987643 555555 555544 33799999999887654 4456543221111 1221100 0
Q ss_pred HHHhCCCceEE-EeCCCCHHHHHHHHHhc-ccCCEEEEEccC
Q 017868 249 QKAMGTGIDVS-FDCAGLNKTMSTALGAT-CAGGKVCLVGMG 288 (365)
Q Consensus 249 ~~~~~~~~d~v-id~~g~~~~~~~~~~~l-~~~G~~~~~g~~ 288 (365)
.+.....+|.| +|--.....+..+.++| +++|+++.+...
T Consensus 107 ~~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP~ 148 (247)
T PF08704_consen 107 DEELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSPC 148 (247)
T ss_dssp STT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEESS
T ss_pred cccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCC
Confidence 00013567876 56555456788999999 899999998643
No 354
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=94.35 E-value=0.57 Score=40.76 Aligned_cols=82 Identities=18% Similarity=0.261 Sum_probs=47.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh--HHHHHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY--RLSVAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 255 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~--~~~~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~ 255 (365)
.|.++||+|+ +++|.++++.++ ..|++ |+.++.++. ..+.+++++... .+..+- +.++....+.++.+. .++
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~-~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 85 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLA-EAGCD-IVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE-FGH 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCE-EEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence 4678999987 999999999554 55994 566654332 223334444321 222222 223344444444332 357
Q ss_pred ceEEEeCCCC
Q 017868 256 IDVSFDCAGL 265 (365)
Q Consensus 256 ~d~vid~~g~ 265 (365)
+|++|.++|.
T Consensus 86 ~D~li~~Ag~ 95 (253)
T PRK08993 86 IDILVNNAGL 95 (253)
T ss_pred CCEEEECCCC
Confidence 9999998873
No 355
>PRK05884 short chain dehydrogenase; Provisional
Probab=94.34 E-value=0.29 Score=41.79 Aligned_cols=74 Identities=20% Similarity=0.288 Sum_probs=44.3
Q ss_pred EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCEEEeCCCCc-ccHHHHHHHHHHHhCCCceEEE
Q 017868 184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNL-QDIAEEVEKIQKAMGTGIDVSF 260 (365)
Q Consensus 184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~d~vi 260 (365)
+++|+|+ +++|.++++.++ ..|+ .|+.+++++++.+. .++++... +..+-.+ +++.+.++.+ ...+|+++
T Consensus 2 ~vlItGas~giG~~ia~~l~-~~g~-~v~~~~r~~~~~~~~~~~~~~~~-~~~D~~~~~~v~~~~~~~----~~~id~lv 74 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFR-NDGH-KVTLVGARRDDLEVAAKELDVDA-IVCDNTDPASLEEARGLF----PHHLDTIV 74 (223)
T ss_pred eEEEEeCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHhccCcE-EecCCCCHHHHHHHHHHH----hhcCcEEE
Confidence 5899987 999999999554 5688 56667777766543 35555432 2222222 2222222222 23689999
Q ss_pred eCCC
Q 017868 261 DCAG 264 (365)
Q Consensus 261 d~~g 264 (365)
.+.|
T Consensus 75 ~~ag 78 (223)
T PRK05884 75 NVPA 78 (223)
T ss_pred ECCC
Confidence 8765
No 356
>PRK07832 short chain dehydrogenase; Provisional
Probab=94.33 E-value=0.53 Score=41.48 Aligned_cols=78 Identities=27% Similarity=0.410 Sum_probs=45.4
Q ss_pred EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-H---HHcCCCEE----EeCCCCcccHHHHHHHHHHHhCC
Q 017868 184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-A---KEIGADNI----VKVSTNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~---~~~g~~~~----~~~~~~~~~~~~~i~~~~~~~~~ 254 (365)
++||+|+ |++|..+++.++ ..|++ |+.+++++++.+. . +..+.... .++. +.++....+.++.+. .+
T Consensus 2 ~vlItGas~giG~~la~~la-~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~-~~ 77 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLA-AQGAE-LFLTDRDADGLAQTVADARALGGTVPEHRALDIS-DYDAVAAFAADIHAA-HG 77 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHH-HCCCE-EEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCC-CHHHHHHHHHHHHHh-cC
Confidence 6899987 999999999555 56984 6667776655432 2 22333211 2221 112222233333222 35
Q ss_pred CceEEEeCCCC
Q 017868 255 GIDVSFDCAGL 265 (365)
Q Consensus 255 ~~d~vid~~g~ 265 (365)
++|++|.+.|.
T Consensus 78 ~id~lv~~ag~ 88 (272)
T PRK07832 78 SMDVVMNIAGI 88 (272)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 357
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=94.33 E-value=0.7 Score=40.45 Aligned_cols=99 Identities=24% Similarity=0.276 Sum_probs=64.5
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-CEEEeCCCCcccHHHHHHHHHHHh
Q 017868 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNLQDIAEEVEKIQKAM 252 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~i~~~~~~~ 252 (365)
+....++++++||=.|+|. |..+.. +++..+...+++++.++...+.+++.-. ...+. . +.. ++. .
T Consensus 24 l~~~~~~~~~~vLDiGcG~-G~~~~~-la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~--~---d~~----~~~--~ 90 (258)
T PRK01683 24 LARVPLENPRYVVDLGCGP-GNSTEL-LVERWPAARITGIDSSPAMLAEARSRLPDCQFVE--A---DIA----SWQ--P 90 (258)
T ss_pred HhhCCCcCCCEEEEEcccC-CHHHHH-HHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE--C---chh----ccC--C
Confidence 3445667889999998754 666666 6666554589999999988887765422 11222 1 111 111 1
Q ss_pred CCCceEEEeCCC------CHHHHHHHHHhcccCCEEEEE
Q 017868 253 GTGIDVSFDCAG------LNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 253 ~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~~~~ 285 (365)
...+|+|+.... ....+..+.++|+++|.+++.
T Consensus 91 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~ 129 (258)
T PRK01683 91 PQALDLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQ 129 (258)
T ss_pred CCCccEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEE
Confidence 357999986433 134677888999999998875
No 358
>PRK09186 flagellin modification protein A; Provisional
Probab=94.32 E-value=0.41 Score=41.59 Aligned_cols=81 Identities=22% Similarity=0.359 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc----CCCE--EEeCCC-CcccHHHHHHHHHHH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI----GADN--IVKVST-NLQDIAEEVEKIQKA 251 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~----g~~~--~~~~~~-~~~~~~~~i~~~~~~ 251 (365)
++.++||+|+ |.+|.+++..+ ...|+ .++.+.+++++.+ ..+++ +... .+..+- +..++.+.+.+..+.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l-~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAI-LEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHH-HHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 4688999987 99999999945 45698 4666767666543 33333 2221 112222 223333344443332
Q ss_pred hCCCceEEEeCCC
Q 017868 252 MGTGIDVSFDCAG 264 (365)
Q Consensus 252 ~~~~~d~vid~~g 264 (365)
.+++|++|.+.+
T Consensus 81 -~~~id~vi~~A~ 92 (256)
T PRK09186 81 -YGKIDGAVNCAY 92 (256)
T ss_pred -cCCccEEEECCc
Confidence 357999999875
No 359
>PLN02823 spermine synthase
Probab=94.32 E-value=0.59 Score=42.59 Aligned_cols=97 Identities=18% Similarity=0.201 Sum_probs=60.4
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-C-------EEEeCCCCcccHHHHHHHHHHHh
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA-D-------NIVKVSTNLQDIAEEVEKIQKAM 252 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~-~-------~~~~~~~~~~~~~~~i~~~~~~~ 252 (365)
...+|||.|+|. |..+.. +++..+.+++++++.+++-.++++++-. . .+-.+. .|-...++ ..
T Consensus 103 ~pk~VLiiGgG~-G~~~re-~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~---~Da~~~L~----~~ 173 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTARE-VLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELII---NDARAELE----KR 173 (336)
T ss_pred CCCEEEEECCCc-hHHHHH-HHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEE---ChhHHHHh----hC
Confidence 446899998764 555556 6566677789999999999999877431 1 111111 22222332 23
Q ss_pred CCCceEEEeCCCC------------HHHHH-HHHHhcccCCEEEEEc
Q 017868 253 GTGIDVSFDCAGL------------NKTMS-TALGATCAGGKVCLVG 286 (365)
Q Consensus 253 ~~~~d~vid~~g~------------~~~~~-~~~~~l~~~G~~~~~g 286 (365)
.+.+|+||--... .+-+. .+.++|+++|.++...
T Consensus 174 ~~~yDvIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q~ 220 (336)
T PLN02823 174 DEKFDVIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQA 220 (336)
T ss_pred CCCccEEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEec
Confidence 5689998653211 12344 5778999999988653
No 360
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.31 E-value=0.51 Score=40.63 Aligned_cols=82 Identities=23% Similarity=0.282 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~ 256 (365)
++.++||+|+ |.+|..++..++ ..|+ .|+..+++.++.+. ...++... .+..+- +.+++.+.+.++.+. -+++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~-~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~i 81 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLH-AQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEAD-LEGV 81 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCC
Confidence 4678999987 999999999554 5688 56666666655543 34444321 222222 222333333333322 3579
Q ss_pred eEEEeCCCC
Q 017868 257 DVSFDCAGL 265 (365)
Q Consensus 257 d~vid~~g~ 265 (365)
|.+|.++|.
T Consensus 82 d~vi~~ag~ 90 (245)
T PRK12936 82 DILVNNAGI 90 (245)
T ss_pred CEEEECCCC
Confidence 999998873
No 361
>PRK12747 short chain dehydrogenase; Provisional
Probab=94.31 E-value=1.3 Score=38.41 Aligned_cols=38 Identities=18% Similarity=0.059 Sum_probs=26.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR 219 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~ 219 (365)
.+.++||+|+ +++|.++++.+ ...|+++++...+++++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l-~~~G~~v~~~~~~~~~~ 41 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRL-ANDGALVAIHYGNRKEE 41 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHH-HHCCCeEEEEcCCCHHH
Confidence 4678999987 99999999945 56698543333344333
No 362
>PRK06914 short chain dehydrogenase; Provisional
Probab=94.30 E-value=0.59 Score=41.31 Aligned_cols=80 Identities=16% Similarity=0.221 Sum_probs=46.8
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCC---CEEEeCCC-CcccHHHHHHHHHHHh
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGA---DNIVKVST-NLQDIAEEVEKIQKAM 252 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~---~~~~~~~~-~~~~~~~~i~~~~~~~ 252 (365)
+.++||+|+ |.+|..++..++ ..|+ .|+++++++++.+.+ +..+. ...+..+- +.+++.. +.++.+.
T Consensus 3 ~k~~lItGasg~iG~~la~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~- 78 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELA-KKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE- 78 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHH-hCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh-
Confidence 567999987 999999999554 5598 566676766554332 22221 11222222 2233333 4444332
Q ss_pred CCCceEEEeCCCC
Q 017868 253 GTGIDVSFDCAGL 265 (365)
Q Consensus 253 ~~~~d~vid~~g~ 265 (365)
.+++|+++.++|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 3578999998873
No 363
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=94.29 E-value=0.32 Score=42.95 Aligned_cols=96 Identities=15% Similarity=0.243 Sum_probs=67.0
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 261 (365)
Q Consensus 182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 261 (365)
..+|.|+|+|.+|.-++. +|.-+|+ .|...+.+.+|.+.++.+-...+..+-++.. .+++. -.++|++|.
T Consensus 168 ~~kv~iiGGGvvgtnaAk-iA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~----~iee~----v~~aDlvIg 237 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAK-IAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPS----NIEEA----VKKADLVIG 237 (371)
T ss_pred CccEEEECCccccchHHH-HHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHH----HHHHH----hhhccEEEE
Confidence 346788899999999999 8888899 5777889999998887754433333223222 33332 247899998
Q ss_pred CCCC------HHHHHHHHHhcccCCEEEEEcc
Q 017868 262 CAGL------NKTMSTALGATCAGGKVCLVGM 287 (365)
Q Consensus 262 ~~g~------~~~~~~~~~~l~~~G~~~~~g~ 287 (365)
++=. .....+.++.|.+++.++.+..
T Consensus 238 aVLIpgakaPkLvt~e~vk~MkpGsVivDVAi 269 (371)
T COG0686 238 AVLIPGAKAPKLVTREMVKQMKPGSVIVDVAI 269 (371)
T ss_pred EEEecCCCCceehhHHHHHhcCCCcEEEEEEE
Confidence 6531 1244567899999999998863
No 364
>PRK06720 hypothetical protein; Provisional
Probab=94.27 E-value=1.1 Score=36.58 Aligned_cols=82 Identities=23% Similarity=0.311 Sum_probs=47.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HH---HcCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AK---EIGADN-IVKVSTN-LQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~---~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~ 253 (365)
.+..++|.|+ +++|...+..+ ...|+ .++.++++++..+. .+ +.+... .+..+-. .+++.+.+.+..+. -
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l-~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~-~ 91 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLL-AKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA-F 91 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence 4678999987 88999999845 45688 57777776654422 22 234322 2232221 12333333333332 3
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|+++.++|.
T Consensus 92 G~iDilVnnAG~ 103 (169)
T PRK06720 92 SRIDMLFQNAGL 103 (169)
T ss_pred CCCCEEEECCCc
Confidence 578999988773
No 365
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.27 E-value=0.25 Score=43.67 Aligned_cols=74 Identities=16% Similarity=0.180 Sum_probs=50.6
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868 173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
+++..+...+.+++|.|+|+.+.+++. .+...|+..+.++.++++|.+.+ +.++.. +...+.
T Consensus 113 ~L~~~~~~~~~~vlilGaGGaarAi~~-aL~~~g~~~i~i~nR~~~~a~~la~~~~~~-----------~~~~~~----- 175 (272)
T PRK12550 113 LLASYQVPPDLVVALRGSGGMAKAVAA-ALRDAGFTDGTIVARNEKTGKALAELYGYE-----------WRPDLG----- 175 (272)
T ss_pred HHHhcCCCCCCeEEEECCcHHHHHHHH-HHHHCCCCEEEEEeCCHHHHHHHHHHhCCc-----------chhhcc-----
Confidence 344434455678999999999999999 66678998888998988876644 445421 000110
Q ss_pred hCCCceEEEeCCC
Q 017868 252 MGTGIDVSFDCAG 264 (365)
Q Consensus 252 ~~~~~d~vid~~g 264 (365)
...+|+||+|+.
T Consensus 176 -~~~~dlvINaTp 187 (272)
T PRK12550 176 -GIEADILVNVTP 187 (272)
T ss_pred -cccCCEEEECCc
Confidence 245899999875
No 366
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=94.27 E-value=0.51 Score=40.91 Aligned_cols=79 Identities=25% Similarity=0.315 Sum_probs=47.2
Q ss_pred EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCceEE
Q 017868 184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGIDVS 259 (365)
Q Consensus 184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v 259 (365)
+++|+|+ |++|.+++..+ ...|+ +|+++++++++.+.+ ..++... .+..+- +.+++.+.+.++.+. .+++|.+
T Consensus 2 ~vlItGasg~iG~~la~~l-~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~~~id~v 78 (248)
T PRK10538 2 IVLVTGATAGFGECITRRF-IQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE-WRNIDVL 78 (248)
T ss_pred EEEEECCCchHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHH-cCCCCEE
Confidence 6899987 99999999944 45698 577777877766544 3344321 111111 122333333333222 3579999
Q ss_pred EeCCCC
Q 017868 260 FDCAGL 265 (365)
Q Consensus 260 id~~g~ 265 (365)
+.++|.
T Consensus 79 i~~ag~ 84 (248)
T PRK10538 79 VNNAGL 84 (248)
T ss_pred EECCCc
Confidence 988763
No 367
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=94.26 E-value=1.1 Score=36.98 Aligned_cols=99 Identities=20% Similarity=0.327 Sum_probs=60.6
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHH----HcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAK----EIGADNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
....+.++++||=.|+|. |..++. +++......+++++.+++..+.++ .++...+..... +....
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~-la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~---d~~~~------ 93 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIE-AALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG---EAPIE------ 93 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHH-HHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec---Cchhh------
Confidence 445677888988888754 555555 555544347999999987765553 344432222111 11111
Q ss_pred HhCCCceEEEeCCC---CHHHHHHHHHhcccCCEEEEE
Q 017868 251 AMGTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 251 ~~~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~~~~ 285 (365)
....+|+|+.... -...+..+.+.|+++|.++..
T Consensus 94 -~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 94 -LPGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred -cCcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence 1357999986432 123556788899999998764
No 368
>CHL00194 ycf39 Ycf39; Provisional
Probab=94.26 E-value=0.31 Score=44.14 Aligned_cols=71 Identities=20% Similarity=0.224 Sum_probs=44.2
Q ss_pred EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeC
Q 017868 184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 262 (365)
Q Consensus 184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~ 262 (365)
+|||+|+ |-+|..++. .+...|. .|.++.++.++...+...++..+. .+- .+. +.+.+.. .++|+||.+
T Consensus 2 kIlVtGatG~iG~~lv~-~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~-~Dl--~d~-~~l~~al----~g~d~Vi~~ 71 (317)
T CHL00194 2 SLLVIGATGTLGRQIVR-QALDEGY-QVRCLVRNLRKASFLKEWGAELVY-GDL--SLP-ETLPPSF----KGVTAIIDA 71 (317)
T ss_pred EEEEECCCcHHHHHHHH-HHHHCCC-eEEEEEcChHHhhhHhhcCCEEEE-CCC--CCH-HHHHHHH----CCCCEEEEC
Confidence 6999987 999999998 4445688 466666776665554555554322 111 121 2233322 468999998
Q ss_pred CC
Q 017868 263 AG 264 (365)
Q Consensus 263 ~g 264 (365)
++
T Consensus 72 ~~ 73 (317)
T CHL00194 72 ST 73 (317)
T ss_pred CC
Confidence 65
No 369
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=94.22 E-value=0.36 Score=43.10 Aligned_cols=36 Identities=22% Similarity=0.336 Sum_probs=29.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD 217 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~ 217 (365)
.+.++||+|+|++|.+++. .+...|++.|.++.++.
T Consensus 125 ~~k~vlI~GAGGagrAia~-~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQV-QCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHH-HHHHCCCCEEEEEeCCc
Confidence 5678999999999999888 55677998788887774
No 370
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=94.21 E-value=0.53 Score=41.03 Aligned_cols=81 Identities=31% Similarity=0.343 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~ 256 (365)
.+.++||+|+ |++|..++..++ ..|+ .|+.++++.++.+. .++++.. ..+..+- +..+....++.+.+. .+++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~-~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~i 81 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYL-AEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVER-FGGI 81 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCC
Confidence 3578999987 999999999554 5598 57777777766543 3444422 1122221 223333334333332 3579
Q ss_pred eEEEeCCC
Q 017868 257 DVSFDCAG 264 (365)
Q Consensus 257 d~vid~~g 264 (365)
|+++.+.|
T Consensus 82 d~li~~ag 89 (257)
T PRK07067 82 DILFNNAA 89 (257)
T ss_pred CEEEECCC
Confidence 99999876
No 371
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=94.20 E-value=0.36 Score=42.60 Aligned_cols=83 Identities=25% Similarity=0.270 Sum_probs=49.0
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHH---cCCC----EEEeCCCC-cccHHHHHHHHH
Q 017868 180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKE---IGAD----NIVKVSTN-LQDIAEEVEKIQ 249 (365)
Q Consensus 180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~---~g~~----~~~~~~~~-~~~~~~~i~~~~ 249 (365)
-.|..+||+|+ .++|.+++..+ ...|+ +|+.+.+++++.+. +++ .+.. ..+..+-. .++..+.+....
T Consensus 6 l~gkvalVTG~s~GIG~aia~~l-a~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLL-AKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV 83 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence 36778899987 89999998845 46699 56666677766433 222 2221 12222222 233333333333
Q ss_pred HHhCCCceEEEeCCC
Q 017868 250 KAMGTGIDVSFDCAG 264 (365)
Q Consensus 250 ~~~~~~~d~vid~~g 264 (365)
+...+++|+.++..|
T Consensus 84 ~~~~GkidiLvnnag 98 (270)
T KOG0725|consen 84 EKFFGKIDILVNNAG 98 (270)
T ss_pred HHhCCCCCEEEEcCC
Confidence 322578999999877
No 372
>PRK06484 short chain dehydrogenase; Validated
Probab=94.18 E-value=0.52 Score=45.92 Aligned_cols=83 Identities=23% Similarity=0.289 Sum_probs=51.9
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868 180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 255 (365)
Q Consensus 180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~ 255 (365)
..+.++||+|+ +++|.++++.++ ..|+ +|+.+++++++.+.+ ++++... .+..+- +.++....+.+..+. -+.
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~ 343 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFA-AAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQAR-WGR 343 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence 35788999987 999999999554 5698 577777777766544 4455432 122222 223333444443332 357
Q ss_pred ceEEEeCCCC
Q 017868 256 IDVSFDCAGL 265 (365)
Q Consensus 256 ~d~vid~~g~ 265 (365)
+|++|.++|.
T Consensus 344 id~li~nAg~ 353 (520)
T PRK06484 344 LDVLVNNAGI 353 (520)
T ss_pred CCEEEECCCC
Confidence 9999998873
No 373
>PRK06523 short chain dehydrogenase; Provisional
Probab=94.17 E-value=0.44 Score=41.56 Aligned_cols=76 Identities=18% Similarity=0.210 Sum_probs=44.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC-CEEEeCCCCc-ccHHHHHHHHHHHhCCCce
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA-DNIVKVSTNL-QDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~-~~~~~~~~~~-~~~~~~i~~~~~~~~~~~d 257 (365)
+|.++||+|+ |++|..+++.++ ..|+ +|+.+.++.+.. .+. ...+..+-.+ ++....+.++.+. .+++|
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~-~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id 79 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLL-EAGA-RVVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLER-LGGVD 79 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHH-HCCC-EEEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHHH-cCCCC
Confidence 4789999987 999999999454 5699 567776654431 111 1112222222 2233333333322 35799
Q ss_pred EEEeCCC
Q 017868 258 VSFDCAG 264 (365)
Q Consensus 258 ~vid~~g 264 (365)
++|.++|
T Consensus 80 ~vi~~ag 86 (260)
T PRK06523 80 ILVHVLG 86 (260)
T ss_pred EEEECCc
Confidence 9999887
No 374
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=94.15 E-value=0.52 Score=40.98 Aligned_cols=82 Identities=28% Similarity=0.473 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc---CCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI---GADN-IVKVSTN-LQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~---g~~~-~~~~~~~-~~~~~~~i~~~~~~~~ 253 (365)
.+.++||+|+ +++|.++++.++ ..|+ .++.+++++++.+ ...++ +... .+..+-. ..++.+.+..+.+. .
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~-~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~ 84 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLA-EYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD-I 84 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh-c
Confidence 4678999987 999999999555 5598 5677777765543 22222 3221 2222222 22333333333222 3
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|+++.+.|.
T Consensus 85 ~~id~vi~~ag~ 96 (254)
T PRK08085 85 GPIDVLINNAGI 96 (254)
T ss_pred CCCCEEEECCCc
Confidence 579999998873
No 375
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=94.13 E-value=0.62 Score=47.00 Aligned_cols=117 Identities=22% Similarity=0.332 Sum_probs=63.4
Q ss_pred ceeeEEeecCCceEECCCCCCcchhccchhhHHHHHHHHhcCCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeC
Q 017868 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV 215 (365)
Q Consensus 137 ~~~~~~~v~~~~~~~iP~~~~~~~a~~~~~~~~a~~~~~~~~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~ 215 (365)
+..+|+.+++...+.+ +..+.+++-+-.. -....-.+.++||+|+ |++|.++++.++ ..|+ .|+.+++
T Consensus 378 ~~~~~~~~~~~~~f~~-eyw~~e~~kl~~~--------~~~~~l~gkvvLVTGasggIG~aiA~~La-~~Ga-~Vvi~~r 446 (676)
T TIGR02632 378 AVSEYVSLPEQEAFDI-EYWPLEEAKLRRM--------PKEKTLARRVAFVTGGAGGIGRETARRLA-AEGA-HVVLADL 446 (676)
T ss_pred cccceecCchhhccch-hhhhhhHHhhccC--------CCCcCCCCCEEEEeCCCcHHHHHHHHHHH-hCCC-EEEEEeC
Confidence 3455666666666665 4444444322100 0001124788999987 999999999554 5698 5777777
Q ss_pred ChhHHHHH-HH----cCCCE--EEeCCC-CcccHHHHHHHHHHHhCCCceEEEeCCCC
Q 017868 216 DDYRLSVA-KE----IGADN--IVKVST-NLQDIAEEVEKIQKAMGTGIDVSFDCAGL 265 (365)
Q Consensus 216 ~~~~~~~~-~~----~g~~~--~~~~~~-~~~~~~~~i~~~~~~~~~~~d~vid~~g~ 265 (365)
+.++.+.+ ++ .+... .+..+- +..++.+.+.+..+. -+++|++|.++|.
T Consensus 447 ~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~-~g~iDilV~nAG~ 503 (676)
T TIGR02632 447 NLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALA-YGGVDIVVNNAGI 503 (676)
T ss_pred CHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHh-cCCCcEEEECCCC
Confidence 76654432 22 23211 222221 222333333333322 3579999998883
No 376
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=94.11 E-value=1 Score=37.72 Aligned_cols=98 Identities=14% Similarity=0.184 Sum_probs=59.3
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHH
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
+.....++.+||-.|+|. |..+.. +++. |. .|++++.+++-.+.+++ .+...+.... .++. +..
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~-La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~---~d~~----~~~- 91 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLY-LAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLHTAV---VDLN----NLT- 91 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHH-HHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcceEEe---cChh----hCC-
Confidence 334456778999998865 667777 6654 77 79999999876655443 2332111100 1111 110
Q ss_pred HhCCCceEEEeCCC----C----HHHHHHHHHhcccCCEEEEE
Q 017868 251 AMGTGIDVSFDCAG----L----NKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 251 ~~~~~~d~vid~~g----~----~~~~~~~~~~l~~~G~~~~~ 285 (365)
....+|+|+.... . ...+....++|+++|.++.+
T Consensus 92 -~~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~ 133 (197)
T PRK11207 92 -FDGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIV 133 (197)
T ss_pred -cCCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 1356999987532 1 23556788899999996554
No 377
>PRK09134 short chain dehydrogenase; Provisional
Probab=94.11 E-value=0.74 Score=40.15 Aligned_cols=82 Identities=20% Similarity=0.191 Sum_probs=45.0
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHH---cCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKE---IGADN-IVKVSTN-LQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~---~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~ 253 (365)
.+.++||+|+ |.+|..+++.+ ...|+++++...++.++.+ ..++ .+... .+..+-. ..+....+.+..+. -
T Consensus 8 ~~k~vlItGas~giG~~la~~l-~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~ 85 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDL-AAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA-L 85 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 4678999987 99999999845 5668855444444444332 2222 23321 2222221 22222233333222 3
Q ss_pred CCceEEEeCCC
Q 017868 254 TGIDVSFDCAG 264 (365)
Q Consensus 254 ~~~d~vid~~g 264 (365)
+++|++|.+.|
T Consensus 86 ~~iD~vi~~ag 96 (258)
T PRK09134 86 GPITLLVNNAS 96 (258)
T ss_pred CCCCEEEECCc
Confidence 57999999987
No 378
>PRK08263 short chain dehydrogenase; Provisional
Probab=94.11 E-value=0.79 Score=40.46 Aligned_cols=81 Identities=21% Similarity=0.198 Sum_probs=47.8
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d 257 (365)
+.++||+|+ |.+|..+++.+ ...|+ .|+.++++.++.+.+ +.++.. ..+..+- +.+++...+..+.+. -+++|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l-~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~d 79 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAA-LERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEH-FGRLD 79 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHH-HHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence 468999987 99999999945 45588 577777777665443 333321 1122211 222333333333322 35789
Q ss_pred EEEeCCCC
Q 017868 258 VSFDCAGL 265 (365)
Q Consensus 258 ~vid~~g~ 265 (365)
.+|.++|.
T Consensus 80 ~vi~~ag~ 87 (275)
T PRK08263 80 IVVNNAGY 87 (275)
T ss_pred EEEECCCC
Confidence 99999874
No 379
>PRK07985 oxidoreductase; Provisional
Probab=94.08 E-value=1.5 Score=39.19 Aligned_cols=81 Identities=20% Similarity=0.251 Sum_probs=44.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC--hhHHH----HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD--DYRLS----VAKEIGADN-IVKVST-NLQDIAEEVEKIQKA 251 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~--~~~~~----~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~ 251 (365)
++.++||+|+ +++|.++++.++ ..|++ |+.+.++ .++.+ ..++.+... .+..+- +.++....+.+..+.
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~-~~G~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYA-REGAD-VAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-HCCCE-EEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 5678999987 999999999555 56995 5555432 22222 223334321 222222 222333333433332
Q ss_pred hCCCceEEEeCCC
Q 017868 252 MGTGIDVSFDCAG 264 (365)
Q Consensus 252 ~~~~~d~vid~~g 264 (365)
-+++|+++.+.|
T Consensus 126 -~g~id~lv~~Ag 137 (294)
T PRK07985 126 -LGGLDIMALVAG 137 (294)
T ss_pred -hCCCCEEEECCC
Confidence 357899998876
No 380
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=94.07 E-value=0.87 Score=39.60 Aligned_cols=82 Identities=13% Similarity=0.266 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-H---HHcCCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-A---KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~---~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
++.++||+|+ +.+|..++..++ ..|+ .++.+++++++.+. . ++.+.. ..+..+- +..++...+++.... -
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~-~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~ 86 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALA-GAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE-H 86 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-c
Confidence 5789999987 999999999554 5698 57777777655332 2 233421 1222221 223333334433332 2
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|.+|.+.|.
T Consensus 87 ~~id~vi~~ag~ 98 (256)
T PRK06124 87 GRLDILVNNVGA 98 (256)
T ss_pred CCCCEEEECCCC
Confidence 478999998873
No 381
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=94.07 E-value=0.72 Score=39.81 Aligned_cols=82 Identities=20% Similarity=0.239 Sum_probs=46.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
.+.++||+|+ |.+|..++..+ ...|+ .|+++.++.++... ++..+... .+..+- +..++.+.+.+..+. .
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l-~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~ 81 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRL-AADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVED-F 81 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-h
Confidence 4578999987 99999999845 45588 57777777544322 22223221 222222 122333333333221 2
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
.++|++|.+.|.
T Consensus 82 ~~~d~vi~~ag~ 93 (251)
T PRK12826 82 GRLDILVANAGI 93 (251)
T ss_pred CCCCEEEECCCC
Confidence 479999998763
No 382
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.03 E-value=0.76 Score=39.99 Aligned_cols=81 Identities=17% Similarity=0.269 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADN-IVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
.+.++||+|+ +++|..++..++ ..|++ ++.++++.++.+.+ ++.+... .+..+- +.++..+.++.+.+. -
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~-~~G~~-vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~ 86 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFA-TAGAS-VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK-L 86 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCe-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence 4689999987 999999999554 56985 56666666554322 2223221 222221 122333333333332 3
Q ss_pred CCceEEEeCCC
Q 017868 254 TGIDVSFDCAG 264 (365)
Q Consensus 254 ~~~d~vid~~g 264 (365)
+++|+++.+.|
T Consensus 87 ~~~d~li~~ag 97 (255)
T PRK06113 87 GKVDILVNNAG 97 (255)
T ss_pred CCCCEEEECCC
Confidence 57899999887
No 383
>PRK09291 short chain dehydrogenase; Provisional
Probab=94.00 E-value=0.34 Score=42.17 Aligned_cols=75 Identities=19% Similarity=0.204 Sum_probs=43.9
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTG 255 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~ 255 (365)
+.++||+|+ |.+|..+++ .+...|+ .++++.+++++.+.+ +..+.. .++..+- .+. ..++.. ...+
T Consensus 2 ~~~vlVtGasg~iG~~ia~-~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~--~~~-~~~~~~---~~~~ 73 (257)
T PRK09291 2 SKTILITGAGSGFGREVAL-RLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDL--TDA-IDRAQA---AEWD 73 (257)
T ss_pred CCEEEEeCCCCHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeC--CCH-HHHHHH---hcCC
Confidence 357999987 999999999 4456698 466666666544332 223322 1121111 222 223322 1358
Q ss_pred ceEEEeCCC
Q 017868 256 IDVSFDCAG 264 (365)
Q Consensus 256 ~d~vid~~g 264 (365)
+|++|.+.|
T Consensus 74 id~vi~~ag 82 (257)
T PRK09291 74 VDVLLNNAG 82 (257)
T ss_pred CCEEEECCC
Confidence 999999887
No 384
>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]
Probab=93.99 E-value=1.9 Score=39.36 Aligned_cols=128 Identities=27% Similarity=0.301 Sum_probs=77.4
Q ss_pred EEEEEcCCHHH-HHHHHHHHHHCC--CCeEEEEeCChhHH-HHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868 184 NVLIMGAGPIG-LVTMLGAPRAFG--APRIVIVDVDDYRL-SVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 259 (365)
Q Consensus 184 ~vlI~G~g~~G-~~ai~~l~~~~g--~~~vi~v~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 259 (365)
+|.|+|+|.++ ...+. ..+..+ +..+.++++++++. +++++++.... | .++.+.+. ...+|+|
T Consensus 5 rvgiiG~G~~~~~~~~~-~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~--~----~~~~~ll~------~~~iD~V 71 (342)
T COG0673 5 RVGIIGAGGIAGKAHLP-ALAALGGGLELVAVVDRDPERAEAFAEEFGIAKA--Y----TDLEELLA------DPDIDAV 71 (342)
T ss_pred EEEEEcccHHHHHHhHH-HHHhCCCceEEEEEecCCHHHHHHHHHHcCCCcc--c----CCHHHHhc------CCCCCEE
Confidence 67889987555 44555 334434 45666668888875 46788997622 2 24444332 3459999
Q ss_pred EeCCCCHHHHHHHHHhcccCCEEEEEccCCCCccccchH------hh-hcCcEEEe--ecccCCcHHHHHHHHHcCCC
Q 017868 260 FDCAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLTP------AA-VREVDVVG--VFRYKNTWPLCLELLRSGKI 328 (365)
Q Consensus 260 id~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~~------~~-~~~~~i~~--~~~~~~~~~~~~~~l~~g~~ 328 (365)
+-++....+.+.+..+|..|= -+++. .+....... +. .+++.+.- ...+...++.+-+++++|.+
T Consensus 72 ~Iatp~~~H~e~~~~AL~aGk-hVl~E---KPla~t~~ea~~l~~~a~~~~~~l~v~~~~Rf~p~~~~~k~li~~g~l 145 (342)
T COG0673 72 YIATPNALHAELALAALEAGK-HVLCE---KPLALTLEEAEELVELARKAGVKLMVGFNRRFDPAVQALKELIDSGAL 145 (342)
T ss_pred EEcCCChhhHHHHHHHHhcCC-EEEEc---CCCCCCHHHHHHHHHHHHHcCCceeeehhhhcCHHHHHHHHHHhcCCc
Confidence 999998888888988888554 45552 222222221 11 12222222 22336678888999999877
No 385
>PRK12367 short chain dehydrogenase; Provisional
Probab=93.99 E-value=0.44 Score=41.41 Aligned_cols=75 Identities=21% Similarity=0.244 Sum_probs=42.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh-hHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD-YRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
.+.++||+|+ |++|.++++ .....|+ .|+.+++++ +..+.... +....+..+- .+.. .+.+. -+.+|+
T Consensus 13 ~~k~~lITGas~gIG~ala~-~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~--~~~~-~~~~~----~~~iDi 82 (245)
T PRK12367 13 QGKRIGITGASGALGKALTK-AFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWEC--GKEE-SLDKQ----LASLDV 82 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHH-HHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeC--CCHH-HHHHh----cCCCCE
Confidence 3579999987 999999999 4456698 566666654 22222111 1112222222 1221 22222 246999
Q ss_pred EEeCCCC
Q 017868 259 SFDCAGL 265 (365)
Q Consensus 259 vid~~g~ 265 (365)
+|.++|.
T Consensus 83 lVnnAG~ 89 (245)
T PRK12367 83 LILNHGI 89 (245)
T ss_pred EEECCcc
Confidence 9999874
No 386
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.98 E-value=0.67 Score=40.61 Aligned_cols=82 Identities=20% Similarity=0.262 Sum_probs=46.7
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHHCCCCeEEEEeCC---hhHHH-HHHHcCCCEEEeCCC-CcccHHHHHHHHHHHh
Q 017868 181 PETNVLIMGA---GPIGLVTMLGAPRAFGAPRIVIVDVD---DYRLS-VAKEIGADNIVKVST-NLQDIAEEVEKIQKAM 252 (365)
Q Consensus 181 ~g~~vlI~G~---g~~G~~ai~~l~~~~g~~~vi~v~~~---~~~~~-~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~ 252 (365)
.+.++||+|+ +++|.++++.++ ..|++ |+.+.+. +++.+ +.++++....+..+- +.++..+.+....+.
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~-~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~- 81 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACK-REGAE-LAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQH- 81 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHH-HCCCe-EEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHH-
Confidence 4678999984 589999998554 56995 5554332 23332 334455332222222 223444444444332
Q ss_pred CCCceEEEeCCCC
Q 017868 253 GTGIDVSFDCAGL 265 (365)
Q Consensus 253 ~~~~d~vid~~g~ 265 (365)
.+++|+++.+.|.
T Consensus 82 ~g~iD~lvnnAG~ 94 (260)
T PRK06997 82 WDGLDGLVHSIGF 94 (260)
T ss_pred hCCCcEEEEcccc
Confidence 3589999998763
No 387
>PRK07577 short chain dehydrogenase; Provisional
Probab=93.98 E-value=0.37 Score=41.24 Aligned_cols=74 Identities=18% Similarity=0.335 Sum_probs=44.4
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceEE
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDVS 259 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~v 259 (365)
+.++||+|+ |.+|..+++.+ ...|+ .|+.+.++.++ .+.. ..+..+- +.++..+.+.++.+ ..+.|++
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l-~~~G~-~v~~~~r~~~~-----~~~~-~~~~~D~~~~~~~~~~~~~~~~--~~~~d~v 72 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRL-ANLGH-QVIGIARSAID-----DFPG-ELFACDLADIEQTAATLAQINE--IHPVDAI 72 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHH-HHCCC-EEEEEeCCccc-----ccCc-eEEEeeCCCHHHHHHHHHHHHH--hCCCcEE
Confidence 568999987 99999999945 45688 56777665543 1111 1222211 22333344444433 2368999
Q ss_pred EeCCCC
Q 017868 260 FDCAGL 265 (365)
Q Consensus 260 id~~g~ 265 (365)
|.+.|.
T Consensus 73 i~~ag~ 78 (234)
T PRK07577 73 VNNVGI 78 (234)
T ss_pred EECCCC
Confidence 998873
No 388
>PRK07791 short chain dehydrogenase; Provisional
Probab=93.97 E-value=0.66 Score=41.31 Aligned_cols=83 Identities=28% Similarity=0.337 Sum_probs=46.9
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh---------hHH-HHHHHc---CCCE-EEeCCC-CcccHHH
Q 017868 180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD---------YRL-SVAKEI---GADN-IVKVST-NLQDIAE 243 (365)
Q Consensus 180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~---------~~~-~~~~~~---g~~~-~~~~~~-~~~~~~~ 243 (365)
-++.++||+|+ +++|.++++.++ ..|++ ++.++++. ++. +..+++ +... .+..+- +.++..+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la-~~G~~-vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~ 81 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFA-AEGAR-VVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAAN 81 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHH-HCCCE-EEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHH
Confidence 35789999987 999999999555 56985 55554432 222 223322 3321 122221 2233334
Q ss_pred HHHHHHHHhCCCceEEEeCCCC
Q 017868 244 EVEKIQKAMGTGIDVSFDCAGL 265 (365)
Q Consensus 244 ~i~~~~~~~~~~~d~vid~~g~ 265 (365)
.++++.+. -+.+|++|.++|.
T Consensus 82 ~~~~~~~~-~g~id~lv~nAG~ 102 (286)
T PRK07791 82 LVDAAVET-FGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHHh-cCCCCEEEECCCC
Confidence 44444332 3579999998873
No 389
>PLN00203 glutamyl-tRNA reductase
Probab=93.92 E-value=0.4 Score=46.36 Aligned_cols=74 Identities=22% Similarity=0.385 Sum_probs=49.7
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260 (365)
Q Consensus 182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 260 (365)
+.+|+|.|+|.+|.+++. .+...|++.++++.++.++.+ ++..++...+.. ..+.+ +.+. -..+|+||
T Consensus 266 ~kkVlVIGAG~mG~~~a~-~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~-----~~~~d-l~~a----l~~aDVVI 334 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVK-HLVSKGCTKMVVVNRSEERVAALREEFPDVEIIY-----KPLDE-MLAC----AAEADVVF 334 (519)
T ss_pred CCEEEEEeCHHHHHHHHH-HHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEe-----ecHhh-HHHH----HhcCCEEE
Confidence 688999999999999999 556679878888888888765 445564221111 11111 1111 24789999
Q ss_pred eCCCCH
Q 017868 261 DCAGLN 266 (365)
Q Consensus 261 d~~g~~ 266 (365)
.|++.+
T Consensus 335 sAT~s~ 340 (519)
T PLN00203 335 TSTSSE 340 (519)
T ss_pred EccCCC
Confidence 998754
No 390
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=93.92 E-value=0.62 Score=40.18 Aligned_cols=81 Identities=16% Similarity=0.176 Sum_probs=45.6
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HH---HHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868 183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VA---KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTG 255 (365)
Q Consensus 183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~---~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~ 255 (365)
.++||+|+ |.+|...+..++ ..|+++++...+++++.+ .. +..+.. ..+..+- +.+++.+.++++.+ ..++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~-~~~~ 79 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLA-QEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQ-HDEP 79 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHH-hCCC
Confidence 37899987 999999999554 569864444455554432 22 223322 1222222 22233333444332 2468
Q ss_pred ceEEEeCCCC
Q 017868 256 IDVSFDCAGL 265 (365)
Q Consensus 256 ~d~vid~~g~ 265 (365)
+|++|.++|.
T Consensus 80 id~vi~~ag~ 89 (247)
T PRK09730 80 LAALVNNAGI 89 (247)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 391
>PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=93.90 E-value=0.67 Score=42.47 Aligned_cols=99 Identities=18% Similarity=0.069 Sum_probs=54.7
Q ss_pred EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCEEEe-------CCCCcccHHHHHHHHHHHhCCC
Q 017868 184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADNIVK-------VSTNLQDIAEEVEKIQKAMGTG 255 (365)
Q Consensus 184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~-------~~~~~~~~~~~i~~~~~~~~~~ 255 (365)
+|.|.|.|.+|+..++.+...-.++.+.+.+.+.+... +++..|.+.... +....-.......+. -.+
T Consensus 3 kVaI~G~GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el----~~~ 78 (341)
T PRK04207 3 KVGVNGYGTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDL----LEK 78 (341)
T ss_pred EEEEECCCHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHh----hcc
Confidence 68899999999999995555566755555554444333 344455331000 000000000011122 146
Q ss_pred ceEEEeCCCCHHHHHHHHHhcccCCEEEEEc
Q 017868 256 IDVSFDCAGLNKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 256 ~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g 286 (365)
+|+||||++...+....-.++..+-.++..+
T Consensus 79 vDVVIdaT~~~~~~e~a~~~~~aGk~VI~~~ 109 (341)
T PRK04207 79 ADIVVDATPGGVGAKNKELYEKAGVKAIFQG 109 (341)
T ss_pred CCEEEECCCchhhHHHHHHHHHCCCEEEEcC
Confidence 9999999997766666666666654444444
No 392
>PRK13303 L-aspartate dehydrogenase; Provisional
Probab=93.90 E-value=0.67 Score=40.82 Aligned_cols=89 Identities=16% Similarity=0.213 Sum_probs=52.8
Q ss_pred EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCC
Q 017868 184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 263 (365)
Q Consensus 184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~ 263 (365)
+|.|+|+|.+|...++.+.+..+.+.+.++..........+.++.. +..+ .++ .++ ...+|+|++|+
T Consensus 3 rVgIiG~G~iG~~~~~~l~~~~~~~l~~v~~~~~~~~~~~~~~~~~-~~~~----~d~----~~l----~~~~DvVve~t 69 (265)
T PRK13303 3 KVAMIGFGAIGAAVLELLEHDPDLRVDWVIVPEHSIDAVRRALGEA-VRVV----SSV----DAL----PQRPDLVVECA 69 (265)
T ss_pred EEEEECCCHHHHHHHHHHhhCCCceEEEEEEcCCCHHHHhhhhccC-Ceee----CCH----HHh----ccCCCEEEECC
Confidence 6889999999999888555544564444443322222222333221 1111 122 122 24689999999
Q ss_pred CCHHHHHHHHHhcccCCEEEEE
Q 017868 264 GLNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 264 g~~~~~~~~~~~l~~~G~~~~~ 285 (365)
+...+.+....+|..+-+++..
T Consensus 70 ~~~~~~e~~~~aL~aGk~Vvi~ 91 (265)
T PRK13303 70 GHAALKEHVVPILKAGIDCAVI 91 (265)
T ss_pred CHHHHHHHHHHHHHcCCCEEEe
Confidence 9877777888888876666554
No 393
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=93.90 E-value=0.49 Score=44.35 Aligned_cols=76 Identities=13% Similarity=0.242 Sum_probs=44.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCC-EEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGAD-NIVKVSTNLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~d 257 (365)
.+.+++|+|+ |++|.++++.+ ...|+ +|+++++++++.+. ....+.. ..+..+- .+. +.+.+. -+++|
T Consensus 177 ~gK~VLITGASgGIG~aLA~~L-a~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dv--sd~-~~v~~~----l~~ID 247 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKEL-HQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQV--GQE-AALAEL----LEKVD 247 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeC--CCH-HHHHHH----hCCCC
Confidence 4679999987 99999999945 45698 56667666655432 2211111 1222211 121 223332 24799
Q ss_pred EEEeCCCC
Q 017868 258 VSFDCAGL 265 (365)
Q Consensus 258 ~vid~~g~ 265 (365)
++|.+.|.
T Consensus 248 iLInnAGi 255 (406)
T PRK07424 248 ILIINHGI 255 (406)
T ss_pred EEEECCCc
Confidence 99988763
No 394
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=93.90 E-value=0.76 Score=39.84 Aligned_cols=79 Identities=25% Similarity=0.381 Sum_probs=46.4
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCE-EEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868 183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 255 (365)
Q Consensus 183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~ 255 (365)
.++||+|+ |.+|..++..++ ..|+ .|++++++.++.+.+.+ .+... .+..+- +.+++...++.+.+. -.+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~-~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~ 78 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALA-AAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAE-FGG 78 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh-cCC
Confidence 57999987 999999998454 5688 57777777765543322 22221 122222 223333333343332 356
Q ss_pred ceEEEeCCC
Q 017868 256 IDVSFDCAG 264 (365)
Q Consensus 256 ~d~vid~~g 264 (365)
+|++|.+.+
T Consensus 79 ~d~vi~~a~ 87 (255)
T TIGR01963 79 LDILVNNAG 87 (255)
T ss_pred CCEEEECCC
Confidence 899998776
No 395
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.90 E-value=1.9 Score=37.28 Aligned_cols=81 Identities=16% Similarity=0.150 Sum_probs=44.7
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHH-H---HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCC
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRL-S---VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~-~---~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~ 254 (365)
+.++||+|+ |.+|...+..++ ..|+++++...++.++. + .++..+... .+..+- +..++...++++.+. -.
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLA-KEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR-YG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHH-HCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH-cC
Confidence 578999987 899999998454 66886444443333322 2 233333321 121111 122333333443332 25
Q ss_pred CceEEEeCCC
Q 017868 255 GIDVSFDCAG 264 (365)
Q Consensus 255 ~~d~vid~~g 264 (365)
++|.+|.++|
T Consensus 84 ~~d~vi~~ag 93 (252)
T PRK06077 84 VADILVNNAG 93 (252)
T ss_pred CCCEEEECCC
Confidence 7999999887
No 396
>PRK07074 short chain dehydrogenase; Provisional
Probab=93.89 E-value=0.85 Score=39.69 Aligned_cols=81 Identities=25% Similarity=0.328 Sum_probs=47.4
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCC--EEEeCCCC-cccHHHHHHHHHHHhCCCc
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGAD--NIVKVSTN-LQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~--~~~~~~~~-~~~~~~~i~~~~~~~~~~~ 256 (365)
+.++||+|+ |.+|..++..++ ..|+ .++.++++.++.+ +.+.+... ..+..+-. .+++...+.++.+. -+++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~-~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFL-AAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAE-RGPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-cCCC
Confidence 468999987 999999999554 5688 5677777766554 33433211 12222221 12222333333322 2469
Q ss_pred eEEEeCCCC
Q 017868 257 DVSFDCAGL 265 (365)
Q Consensus 257 d~vid~~g~ 265 (365)
|++|.+.|.
T Consensus 79 d~vi~~ag~ 87 (257)
T PRK07074 79 DVLVANAGA 87 (257)
T ss_pred CEEEECCCC
Confidence 999998873
No 397
>PRK00536 speE spermidine synthase; Provisional
Probab=93.88 E-value=0.34 Score=42.32 Aligned_cols=101 Identities=10% Similarity=-0.130 Sum_probs=63.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 259 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 259 (365)
...++|||.|+|- |.++-+ ++|+- +.|..|+-+++-.++++++-....-.+++..-.+...+. +...+.+|+|
T Consensus 71 ~~pk~VLIiGGGD-Gg~~RE-vLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~---~~~~~~fDVI 143 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQ-LFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLL---DLDIKKYDLI 143 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHH-HHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhh---hccCCcCCEE
Confidence 4458999998765 556667 66664 378999999998888888321100011111111111121 1123679998
Q ss_pred E-eCCCCHHHHHHHHHhcccCCEEEEEcc
Q 017868 260 F-DCAGLNKTMSTALGATCAGGKVCLVGM 287 (365)
Q Consensus 260 i-d~~g~~~~~~~~~~~l~~~G~~~~~g~ 287 (365)
| |+.-.+.-...+.++|+++|.++..+.
T Consensus 144 IvDs~~~~~fy~~~~~~L~~~Gi~v~Qs~ 172 (262)
T PRK00536 144 ICLQEPDIHKIDGLKRMLKEDGVFISVAK 172 (262)
T ss_pred EEcCCCChHHHHHHHHhcCCCcEEEECCC
Confidence 6 445566677788999999999998753
No 398
>PLN03013 cysteine synthase
Probab=93.86 E-value=2 Score=40.51 Aligned_cols=57 Identities=21% Similarity=0.314 Sum_probs=43.6
Q ss_pred HhcCCCCCCEEEEEc-CCHHHHHHHHHHHHHCCCCeEEEEe--CChhHHHHHHHcCCCEEE
Q 017868 175 RRANIGPETNVLIMG-AGPIGLVTMLGAPRAFGAPRIVIVD--VDDYRLSVAKEIGADNIV 232 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G-~g~~G~~ai~~l~~~~g~~~vi~v~--~~~~~~~~~~~~g~~~~~ 232 (365)
+.+.+++|.+.+|.. +|..|.+++. .++.+|++.++++. .+++|.+.++.+|+.-+.
T Consensus 167 ~~G~l~pG~~~VVeaSSGN~G~ALA~-~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~ 226 (429)
T PLN03013 167 QKGFISPGKSVLVEPTSGNTGIGLAF-IAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226 (429)
T ss_pred HcCCcCCCCcEEEEECCcHHHHHHHH-HHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 456678886666664 5999998888 99999998777764 346788899999987554
No 399
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=93.86 E-value=0.91 Score=38.94 Aligned_cols=103 Identities=20% Similarity=0.257 Sum_probs=62.1
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHH
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQ 249 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~ 249 (365)
....++++++||=.|+|. |..+.. +++..+. ..+++++.+++..+.+++ .+.+.+.....+..++ .
T Consensus 39 ~~l~~~~~~~vLDiGcG~-G~~~~~-la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~-------~ 109 (231)
T TIGR02752 39 KRMNVQAGTSALDVCCGT-ADWSIA-LAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNAMEL-------P 109 (231)
T ss_pred HhcCCCCCCEEEEeCCCc-CHHHHH-HHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEechhcC-------C
Confidence 456778899999998754 555555 5555442 379999999887665543 2332221111111111 0
Q ss_pred HHhCCCceEEEeCCC------CHHHHHHHHHhcccCCEEEEEcc
Q 017868 250 KAMGTGIDVSFDCAG------LNKTMSTALGATCAGGKVCLVGM 287 (365)
Q Consensus 250 ~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~~~~g~ 287 (365)
.....+|+|+-... ....+..+.+.|+++|.++....
T Consensus 110 -~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 152 (231)
T TIGR02752 110 -FDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET 152 (231)
T ss_pred -CCCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence 01357999975322 12356678899999999987643
No 400
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=93.85 E-value=1.3 Score=42.06 Aligned_cols=104 Identities=15% Similarity=0.149 Sum_probs=61.6
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCE-EEeCCCCcccHHHHHHHHH
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVSTNLQDIAEEVEKIQ 249 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~-~~~~~~~~~~~~~~i~~~~ 249 (365)
....+++|++||=.|+|+ |..++. +++..+...+++++.++++.+. ++++|... +.....+..+... +.
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~-la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~~----~~ 305 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTH-ILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPSQ----WA 305 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHH-HHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccccc----cc
Confidence 445678999998887643 334444 4444443479999999988654 45567652 2112221111100 00
Q ss_pred HHhCCCceEEEe---CCCC-------------------------HHHHHHHHHhcccCCEEEEEc
Q 017868 250 KAMGTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 250 ~~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~~~~g 286 (365)
....+|.|+- |+|. ...+..+++.|++||+++...
T Consensus 306 --~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvyst 368 (426)
T TIGR00563 306 --ENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYAT 368 (426)
T ss_pred --cccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 1357999874 4442 135667888999999998653
No 401
>PRK08303 short chain dehydrogenase; Provisional
Probab=93.85 E-value=0.9 Score=40.93 Aligned_cols=81 Identities=19% Similarity=0.251 Sum_probs=46.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCCh----------hHH----HHHHHcCCCE-EEeCCC-CcccHHH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDD----------YRL----SVAKEIGADN-IVKVST-NLQDIAE 243 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~----------~~~----~~~~~~g~~~-~~~~~~-~~~~~~~ 243 (365)
.+.++||+|+ +++|.++++.++ ..|+ .|+.+.++. ++. +.++..+... .+..+- +.++...
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la-~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~ 84 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELG-AAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA 84 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCC-EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 4678999987 899999999554 5698 466665542 222 2233334321 222222 2233333
Q ss_pred HHHHHHHHhCCCceEEEeCC-C
Q 017868 244 EVEKIQKAMGTGIDVSFDCA-G 264 (365)
Q Consensus 244 ~i~~~~~~~~~~~d~vid~~-g 264 (365)
.+.++.+. -+.+|++|.++ |
T Consensus 85 ~~~~~~~~-~g~iDilVnnA~g 105 (305)
T PRK08303 85 LVERIDRE-QGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHHH-cCCccEEEECCcc
Confidence 44443332 24799999987 5
No 402
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=93.84 E-value=0.81 Score=42.61 Aligned_cols=35 Identities=40% Similarity=0.501 Sum_probs=29.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
.+.+|+|.|+|++|..++. .+...|...+..++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~-~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAAL-YLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHH-HHHHcCCCeEEEEeCC
Confidence 5568999999999999999 5567799999999876
No 403
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=93.82 E-value=0.77 Score=40.11 Aligned_cols=83 Identities=19% Similarity=0.199 Sum_probs=45.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
++.++||+|+ +++|..+++.+ ...|+++++...++++..+ .++..+... .+..+- +.++..+.+..+.+. .
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l-~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~ 83 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRF-GKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE-F 83 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH-c
Confidence 5779999987 99999999945 4669854443332333222 222333221 122111 222333333333322 3
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|+++.+.|.
T Consensus 84 g~id~lv~~ag~ 95 (261)
T PRK08936 84 GTLDVMINNAGI 95 (261)
T ss_pred CCCCEEEECCCC
Confidence 579999998873
No 404
>PRK11579 putative oxidoreductase; Provisional
Probab=93.80 E-value=1.3 Score=40.68 Aligned_cols=128 Identities=17% Similarity=0.125 Sum_probs=74.4
Q ss_pred CEEEEEcCCHHHH-HHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868 183 TNVLIMGAGPIGL-VTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 261 (365)
Q Consensus 183 ~~vlI~G~g~~G~-~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 261 (365)
-+|.|+|+|.+|. ..+..+.+.-+++.+.+.+.+.++.. .+++.... + .++.+.+. ...+|+|+.
T Consensus 5 irvgiiG~G~i~~~~~~~~~~~~~~~~l~av~d~~~~~~~--~~~~~~~~--~----~~~~ell~------~~~vD~V~I 70 (346)
T PRK11579 5 IRVGLIGYGYASKTFHAPLIAGTPGLELAAVSSSDATKVK--ADWPTVTV--V----SEPQHLFN------DPNIDLIVI 70 (346)
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCCEEEEEECCCHHHHH--hhCCCCce--e----CCHHHHhc------CCCCCEEEE
Confidence 3788999999986 44553445556755555565555432 34432222 1 24433332 357999999
Q ss_pred CCCCHHHHHHHHHhcccCCEEEEEccCCCCccccch---H----hhhcCcEEEe--ecccCCcHHHHHHHHHcCCC
Q 017868 262 CAGLNKTMSTALGATCAGGKVCLVGMGHHEMTVPLT---P----AAVREVDVVG--VFRYKNTWPLCLELLRSGKI 328 (365)
Q Consensus 262 ~~g~~~~~~~~~~~l~~~G~~~~~g~~~~~~~~~~~---~----~~~~~~~i~~--~~~~~~~~~~~~~~l~~g~~ 328 (365)
|+....+.+.+..++..+ +-+++. .+...... . .-.+++.+.- ...+...++.+-+++++|.+
T Consensus 71 ~tp~~~H~~~~~~al~aG-khVl~E---KPla~t~~ea~~l~~~a~~~g~~l~v~~~~R~~p~~~~~k~~i~~g~i 142 (346)
T PRK11579 71 PTPNDTHFPLAKAALEAG-KHVVVD---KPFTVTLSQARELDALAKSAGRVLSVFHNRRWDSDFLTLKALLAEGVL 142 (346)
T ss_pred cCCcHHHHHHHHHHHHCC-CeEEEe---CCCCCCHHHHHHHHHHHHHhCCEEEEEeeccCCHHHHHHHHHHhcCCC
Confidence 999888888888888764 445552 22111111 1 1123333322 22335678888899999877
No 405
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=93.79 E-value=0.62 Score=41.21 Aligned_cols=81 Identities=11% Similarity=0.158 Sum_probs=54.0
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-----HHHcCC---CEEEeCCCCcccHHHHHHHHHH
Q 017868 180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-----AKEIGA---DNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-----~~~~g~---~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
+-|++.+|+|+ .++|.+.+.-+|+ .|. +|+.+.++.+|++. .++.++ ..++|+...+.++.+ +++...
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~-i~~~l~ 123 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEK-LLEKLA 123 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHH-HHHHhc
Confidence 45688999998 8899977765887 599 58899999998764 344452 223455444443443 333322
Q ss_pred HhCCCceEEEeCCCC
Q 017868 251 AMGTGIDVSFDCAGL 265 (365)
Q Consensus 251 ~~~~~~d~vid~~g~ 265 (365)
+-.+-+.++++|-
T Consensus 124 --~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 124 --GLDVGILVNNVGM 136 (312)
T ss_pred --CCceEEEEecccc
Confidence 5678888998883
No 406
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=93.72 E-value=0.94 Score=39.69 Aligned_cols=82 Identities=24% Similarity=0.287 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~ 253 (365)
.+.++||+|+ +++|..++..++ ..|++ ++.+++++++.+. +++.+... .+..+-. .++....+.++.+. -
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~-~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~ 85 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYA-KAGAT-IVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE-V 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCCe-EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-C
Confidence 5678999987 999999998555 56995 6666677655432 22334322 2222221 12222333333222 2
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|++|.+.|.
T Consensus 86 ~~id~li~~ag~ 97 (265)
T PRK07097 86 GVIDILVNNAGI 97 (265)
T ss_pred CCCCEEEECCCC
Confidence 579999998873
No 407
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.71 E-value=0.63 Score=40.02 Aligned_cols=82 Identities=20% Similarity=0.205 Sum_probs=45.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
+..++||+|+ |.+|..++. .+...|.++++.+.++++..+.. ...+.. ..+..+- +.+++.+.+.+..+. .
T Consensus 5 ~~~~vlItGasg~iG~~l~~-~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~ 82 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIAL-RLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVER-F 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHH-HHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHH-c
Confidence 3468999987 999999999 44566886545454444433322 222322 1222222 222333333333221 3
Q ss_pred CCceEEEeCCC
Q 017868 254 TGIDVSFDCAG 264 (365)
Q Consensus 254 ~~~d~vid~~g 264 (365)
.++|.+|.++|
T Consensus 83 ~~id~vi~~ag 93 (249)
T PRK12825 83 GRIDILVNNAG 93 (249)
T ss_pred CCCCEEEECCc
Confidence 57999999887
No 408
>PRK06484 short chain dehydrogenase; Validated
Probab=93.70 E-value=0.69 Score=45.10 Aligned_cols=82 Identities=27% Similarity=0.379 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~ 256 (365)
.+.++||+|+ +++|.++++.+ ...|+ +|+.++++.++.+ ..++++... .+..+- +.+++...+.++.+. .+++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l-~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRF-ARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHRE-FGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHH-hCCC
Confidence 5788999987 99999999955 45698 5777777777654 445565422 122221 223444444444332 3579
Q ss_pred eEEEeCCCC
Q 017868 257 DVSFDCAGL 265 (365)
Q Consensus 257 d~vid~~g~ 265 (365)
|++|.+.|.
T Consensus 81 D~li~nag~ 89 (520)
T PRK06484 81 DVLVNNAGV 89 (520)
T ss_pred CEEEECCCc
Confidence 999998774
No 409
>PRK12937 short chain dehydrogenase; Provisional
Probab=93.66 E-value=0.79 Score=39.47 Aligned_cols=83 Identities=18% Similarity=0.141 Sum_probs=45.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH----HHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS----VAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~----~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
++.++||+|+ |++|..++..+ ...|+++++...+++.+.+ .+++.+.. ..+..+- +.+++.+.+++..+. -
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l-~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRL-AADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA-F 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHH-HHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence 4678999987 99999999945 4569854444433333222 22333422 1222221 222333334433332 3
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|++|.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (245)
T PRK12937 82 GRIDVLVNNAGV 93 (245)
T ss_pred CCCCEEEECCCC
Confidence 579999998873
No 410
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=93.66 E-value=0.26 Score=43.04 Aligned_cols=74 Identities=19% Similarity=0.113 Sum_probs=49.0
Q ss_pred EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCC
Q 017868 184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 263 (365)
Q Consensus 184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~ 263 (365)
+|||.|+++-|..++. .+...|. .|++..+++.+.+.+.+.|...++.-. .+-.+ ++++.. ..++|+|||++
T Consensus 2 ~ILvlGGT~egr~la~-~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g~---l~~~~-l~~~l~--~~~i~~VIDAt 73 (256)
T TIGR00715 2 TVLLMGGTVDSRAIAK-GLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTGA---LDPQE-LREFLK--RHSIDILVDAT 73 (256)
T ss_pred eEEEEechHHHHHHHH-HHHhCCC-eEEEEEccCCccccccccCCceEEECC---CCHHH-HHHHHH--hcCCCEEEEcC
Confidence 6899988556998887 4445687 466666777777777776665555322 22222 444433 57899999998
Q ss_pred CC
Q 017868 264 GL 265 (365)
Q Consensus 264 g~ 265 (365)
..
T Consensus 74 HP 75 (256)
T TIGR00715 74 HP 75 (256)
T ss_pred CH
Confidence 83
No 411
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=93.64 E-value=1 Score=37.90 Aligned_cols=98 Identities=14% Similarity=0.116 Sum_probs=60.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 256 (365)
++.+||-.|+|. |..+.. +++......+++++.+++..+.+++ .+...+..... +..+.+... .....+
T Consensus 40 ~~~~VLDiGcGt-G~~~~~-la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~~---d~~~~l~~~--~~~~~~ 112 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVE-MAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLCG---DAVEVLLDM--FPDGSL 112 (202)
T ss_pred CCCeEEEEccCC-CHHHHH-HHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEec---CHHHHHHHH--cCcccc
Confidence 667888888865 666667 6655544579999999988776643 23332222112 221222211 114568
Q ss_pred eEEEeCCC--------------CHHHHHHHHHhcccCCEEEEE
Q 017868 257 DVSFDCAG--------------LNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 257 d~vid~~g--------------~~~~~~~~~~~l~~~G~~~~~ 285 (365)
|.|+-... ....+..+.+.|+++|.+++.
T Consensus 113 D~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~ 155 (202)
T PRK00121 113 DRIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFA 155 (202)
T ss_pred ceEEEECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEE
Confidence 88875322 134677889999999999876
No 412
>TIGR02371 ala_DH_arch alanine dehydrogenase, Archaeoglobus fulgidus type. This enzyme, a homolog of bacterial ornithine cyclodeaminases and marsupial mu-crystallins, is a homodimeric, NAD-dependent alanine dehydrogenase found in Archaeoglobus fulgidus and several other Archaea. For a number of close homologs, scoring between trusted and noise cutoffs, it is not clear at present what is the enzymatic activity.
Probab=93.63 E-value=1.9 Score=39.26 Aligned_cols=101 Identities=15% Similarity=0.161 Sum_probs=64.8
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHH---HcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAK---EIGADNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~---~~g~~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
+...-+...++.|.|+|..|.+.+..++.....+.+.+.+++.++.+ +++ ++|.. +... .+..+.+
T Consensus 121 ~~La~~~~~~lgiiG~G~qA~~~l~al~~~~~~~~v~V~~r~~~~~~~~~~~~~~~g~~-v~~~----~~~~eav----- 190 (325)
T TIGR02371 121 KYLARKDSSVLGIIGAGRQAWTQLEALSRVFDLEEVSVYCRTPSTREKFALRASDYEVP-VRAA----TDPREAV----- 190 (325)
T ss_pred HHhCCCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhhCCc-EEEe----CCHHHHh-----
Confidence 43333455788999999999987775556677888999999988865 333 33432 1111 1222222
Q ss_pred HhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC
Q 017868 251 AMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH 289 (365)
Q Consensus 251 ~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~ 289 (365)
.+.|+|+-|+.+...+ .....++++-+++.+|...
T Consensus 191 ---~~aDiVitaT~s~~P~-~~~~~l~~g~~v~~vGs~~ 225 (325)
T TIGR02371 191 ---EGCDILVTTTPSRKPV-VKADWVSEGTHINAIGADA 225 (325)
T ss_pred ---ccCCEEEEecCCCCcE-ecHHHcCCCCEEEecCCCC
Confidence 4789999988654211 2345789999998888543
No 413
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=93.63 E-value=0.45 Score=41.36 Aligned_cols=95 Identities=18% Similarity=0.174 Sum_probs=60.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCC---------C-EEEeCCCCcccHHHHHHHHHH
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGA---------D-NIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~---------~-~~~~~~~~~~~~~~~i~~~~~ 250 (365)
+.++|||.|+|. |..+-+ +++....+.+.+|+-+++-.+.++++-. . .++. .|-...+++
T Consensus 76 ~p~~VLiiGgG~-G~~~~e-ll~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~-----~Dg~~~l~~--- 145 (246)
T PF01564_consen 76 NPKRVLIIGGGD-GGTARE-LLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII-----GDGRKFLKE--- 145 (246)
T ss_dssp ST-EEEEEESTT-SHHHHH-HTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE-----STHHHHHHT---
T ss_pred CcCceEEEcCCC-hhhhhh-hhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE-----hhhHHHHHh---
Confidence 678999998654 445556 6666667789999999998888877421 1 1222 233333333
Q ss_pred HhCC-CceEEE-eCCC---------CHHHHHHHHHhcccCCEEEEEc
Q 017868 251 AMGT-GIDVSF-DCAG---------LNKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 251 ~~~~-~~d~vi-d~~g---------~~~~~~~~~~~l~~~G~~~~~g 286 (365)
... .+|+|+ |... +.+-++.+.++|+++|.++...
T Consensus 146 -~~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~Gv~v~~~ 191 (246)
T PF01564_consen 146 -TQEEKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPDGVLVLQA 191 (246)
T ss_dssp -SSST-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred -ccCCcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCCcEEEEEc
Confidence 234 899997 4433 2356778889999999998865
No 414
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=93.63 E-value=2.3 Score=31.85 Aligned_cols=92 Identities=18% Similarity=0.155 Sum_probs=58.4
Q ss_pred EEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCCC
Q 017868 185 VLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 264 (365)
Q Consensus 185 vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~g 264 (365)
|+|.|.|.+|..+++ .++..+. .+++++.++++.+.+++.|.. ++.-+..++ +.+++ ..-..++.++-+++
T Consensus 1 vvI~G~g~~~~~i~~-~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~---~~l~~---a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 1 VVIIGYGRIGREIAE-QLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDATDP---EVLER---AGIEKADAVVILTD 71 (116)
T ss_dssp EEEES-SHHHHHHHH-HHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-TTSH---HHHHH---TTGGCESEEEEESS
T ss_pred eEEEcCCHHHHHHHH-HHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccchhh---hHHhh---cCccccCEEEEccC
Confidence 578899999999999 5556554 789999999999999888854 443222222 22322 22357888888877
Q ss_pred CHHHHH---HHHHhcccCCEEEEE
Q 017868 265 LNKTMS---TALGATCAGGKVCLV 285 (365)
Q Consensus 265 ~~~~~~---~~~~~l~~~G~~~~~ 285 (365)
....-. ...+.+.+..+++..
T Consensus 72 ~d~~n~~~~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 72 DDEENLLIALLARELNPDIRIIAR 95 (116)
T ss_dssp SHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred CHHHHHHHHHHHHHHCCCCeEEEE
Confidence 643211 233445566666654
No 415
>PRK07574 formate dehydrogenase; Provisional
Probab=93.63 E-value=0.71 Score=42.92 Aligned_cols=90 Identities=20% Similarity=0.232 Sum_probs=57.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 260 (365)
.|.+|.|+|.|.+|+.+++ .++.+|. .|.+.++.....+..+.+++... .++ .++. ...|+|+
T Consensus 191 ~gktVGIvG~G~IG~~vA~-~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~-------~~l----~ell----~~aDvV~ 253 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLR-RLKPFDV-KLHYTDRHRLPEEVEQELGLTYH-------VSF----DSLV----SVCDVVT 253 (385)
T ss_pred CCCEEEEECCCHHHHHHHH-HHHhCCC-EEEEECCCCCchhhHhhcCceec-------CCH----HHHh----hcCCEEE
Confidence 5678999999999999999 7789999 67888776544444444553210 122 2221 3568887
Q ss_pred eCCCCHHHHH-----HHHHhcccCCEEEEEcc
Q 017868 261 DCAGLNKTMS-----TALGATCAGGKVCLVGM 287 (365)
Q Consensus 261 d~~g~~~~~~-----~~~~~l~~~G~~~~~g~ 287 (365)
-+........ ..+..|+++..++.++.
T Consensus 254 l~lPlt~~T~~li~~~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 254 IHCPLHPETEHLFDADVLSRMKRGSYLVNTAR 285 (385)
T ss_pred EcCCCCHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence 7665322221 35667777776666653
No 416
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.60 E-value=0.7 Score=40.41 Aligned_cols=81 Identities=16% Similarity=0.220 Sum_probs=45.6
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHHCCCCeEEEEeCCh---hHH-HHHHHcCCCE--EEeCC-CCcccHHHHHHHHHH
Q 017868 181 PETNVLIMGA---GPIGLVTMLGAPRAFGAPRIVIVDVDD---YRL-SVAKEIGADN--IVKVS-TNLQDIAEEVEKIQK 250 (365)
Q Consensus 181 ~g~~vlI~G~---g~~G~~ai~~l~~~~g~~~vi~v~~~~---~~~-~~~~~~g~~~--~~~~~-~~~~~~~~~i~~~~~ 250 (365)
.+.++||+|+ +++|.++++.++ ..|++ |+.+.+++ ++. ++.+++.... .+..+ .+.++....++++.+
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la-~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLH-NAGAK-LVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHH-HCCCE-EEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 4678999986 499999999565 56995 55554432 233 2334442111 12222 122334344444433
Q ss_pred HhCCCceEEEeCCC
Q 017868 251 AMGTGIDVSFDCAG 264 (365)
Q Consensus 251 ~~~~~~d~vid~~g 264 (365)
. -+++|+++.++|
T Consensus 84 ~-~g~ld~lv~nag 96 (257)
T PRK08594 84 E-VGVIHGVAHCIA 96 (257)
T ss_pred h-CCCccEEEECcc
Confidence 2 257999998876
No 417
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=93.60 E-value=1.2 Score=37.08 Aligned_cols=76 Identities=28% Similarity=0.386 Sum_probs=45.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc----CCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI----GADNIVKVSTNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~----g~~~~~~~~~~~~~~~~~i~~~~~~~~~ 254 (365)
++.+++|.|+ |.+|..++..++ ..|. .++.+.++.++.+.+ +.+ +.. +...+. .+.. .+.+.. .
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~-~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~-~~~~~~--~~~~-~~~~~~----~ 96 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLA-REGA-RVVLVGRDLERAQKAADSLRARFGEG-VGAVET--SDDA-ARAAAI----K 96 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HCCC-EEEEEcCCHHHHHHHHHHHHhhcCCc-EEEeeC--CCHH-HHHHHH----h
Confidence 5679999987 999998888454 5687 677777777765433 333 222 111111 1221 222221 4
Q ss_pred CceEEEeCCCCH
Q 017868 255 GIDVSFDCAGLN 266 (365)
Q Consensus 255 ~~d~vid~~g~~ 266 (365)
++|+||.++...
T Consensus 97 ~~diVi~at~~g 108 (194)
T cd01078 97 GADVVFAAGAAG 108 (194)
T ss_pred cCCEEEECCCCC
Confidence 689999988754
No 418
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=93.59 E-value=1.2 Score=37.76 Aligned_cols=98 Identities=15% Similarity=0.205 Sum_probs=54.4
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHHCCC-CeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868 179 IGPETNVLIMGAGPIGLVTMLGAPRAFGA-PRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~-~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 257 (365)
++++++||=.|+|+ |..+.. +++..+. ..|++++.++.. .+.-..++.-+-.+......+.+.. ....+|
T Consensus 49 ~~~~~~VLDlG~Gt-G~~t~~-l~~~~~~~~~V~aVDi~~~~-----~~~~v~~i~~D~~~~~~~~~i~~~~--~~~~~D 119 (209)
T PRK11188 49 FKPGMTVVDLGAAP-GGWSQY-AVTQIGDKGRVIACDILPMD-----PIVGVDFLQGDFRDELVLKALLERV--GDSKVQ 119 (209)
T ss_pred CCCCCEEEEEcccC-CHHHHH-HHHHcCCCceEEEEeccccc-----CCCCcEEEecCCCChHHHHHHHHHh--CCCCCC
Confidence 57888888888754 444444 4445443 379999987621 1111122221111111122232221 256899
Q ss_pred EEEeCC-----CC------------HHHHHHHHHhcccCCEEEEE
Q 017868 258 VSFDCA-----GL------------NKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 258 ~vid~~-----g~------------~~~~~~~~~~l~~~G~~~~~ 285 (365)
+|+... |. ...+..+.+.|+++|.++..
T Consensus 120 ~V~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpGG~~vi~ 164 (209)
T PRK11188 120 VVMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPGGSFVVK 164 (209)
T ss_pred EEecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 999743 22 12456788899999999874
No 419
>PRK03612 spermidine synthase; Provisional
Probab=93.56 E-value=0.53 Score=45.83 Aligned_cols=98 Identities=16% Similarity=0.167 Sum_probs=61.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcC-C----------CEEEeCCCCcccHHHHHHHH
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIG-A----------DNIVKVSTNLQDIAEEVEKI 248 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g-~----------~~~~~~~~~~~~~~~~i~~~ 248 (365)
++.++||+.|+|. |..+.. +++....+++..++.+++-.+.+++.. . +.+.... .|..+.+++
T Consensus 296 ~~~~rVL~IG~G~-G~~~~~-ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~---~Da~~~l~~- 369 (521)
T PRK03612 296 ARPRRVLVLGGGD-GLALRE-VLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVN---DDAFNWLRK- 369 (521)
T ss_pred CCCCeEEEEcCCc-cHHHHH-HHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEE---ChHHHHHHh-
Confidence 4567999998753 556666 555544468999999999999887721 1 1111111 232222322
Q ss_pred HHHhCCCceEEEeCCCCH-----------HHHHHHHHhcccCCEEEEEc
Q 017868 249 QKAMGTGIDVSFDCAGLN-----------KTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 249 ~~~~~~~~d~vid~~g~~-----------~~~~~~~~~l~~~G~~~~~g 286 (365)
..+++|+|+-....+ +.++.+.++|+++|.++...
T Consensus 370 ---~~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~~ 415 (521)
T PRK03612 370 ---LAEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQS 415 (521)
T ss_pred ---CCCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEec
Confidence 256899997643211 24567888999999988764
No 420
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=93.55 E-value=2.2 Score=36.17 Aligned_cols=104 Identities=20% Similarity=0.322 Sum_probs=65.9
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868 177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
.+.+...+||=.|.+ +|..++. +|..+. -.++++++.++++.+.+ ++.|....+..-.. .+..+.+.+ .
T Consensus 55 ~~~~~~k~iLEiGT~-~GySal~-mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~-gdal~~l~~---~ 128 (219)
T COG4122 55 ARLSGPKRILEIGTA-IGYSALW-MALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG-GDALDVLSR---L 128 (219)
T ss_pred HHhcCCceEEEeecc-cCHHHHH-HHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec-CcHHHHHHh---c
Confidence 455677888888852 2444455 444544 33799999999987655 44576653322111 244444443 2
Q ss_pred hCCCceEEEeCCC---CHHHHHHHHHhcccCCEEEEEc
Q 017868 252 MGTGIDVSFDCAG---LNKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 252 ~~~~~d~vid~~g---~~~~~~~~~~~l~~~G~~~~~g 286 (365)
..+.+|+||-=.. -+..++.+++.|++||.++.-.
T Consensus 129 ~~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN 166 (219)
T COG4122 129 LDGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN 166 (219)
T ss_pred cCCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence 3578999975333 2457778999999999988754
No 421
>PRK06823 ornithine cyclodeaminase; Validated
Probab=93.54 E-value=2.9 Score=37.85 Aligned_cols=103 Identities=10% Similarity=0.108 Sum_probs=67.8
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHH---HcCCCEEEeCCCCcccHHHHHHHHH
Q 017868 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAK---EIGADNIVKVSTNLQDIAEEVEKIQ 249 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~---~~g~~~~~~~~~~~~~~~~~i~~~~ 249 (365)
.+...-+.-.++.|.|+|..+...++.++.....+.|.+.+++.++.+ +++ +.+..... . .+. ++.
T Consensus 120 ~~~La~~d~~~l~iiG~G~qA~~~~~a~~~v~~i~~v~v~~r~~~~a~~~~~~~~~~~~~v~~-~----~~~----~~a- 189 (315)
T PRK06823 120 ARLLAPQHVSAIGIVGTGIQARMQLMYLKNVTDCRQLWVWGRSETALEEYRQYAQALGFAVNT-T----LDA----AEV- 189 (315)
T ss_pred HHHhcCCCCCEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEE-E----CCH----HHH-
Confidence 343333455788889999999988887777788999999999988865 333 23433221 1 122 222
Q ss_pred HHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC
Q 017868 250 KAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH 290 (365)
Q Consensus 250 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~ 290 (365)
=.+.|+|+-|+.+...+ .-.+.++++-++..+|....
T Consensus 190 ---v~~ADIV~taT~s~~P~-~~~~~l~~G~hi~~iGs~~p 226 (315)
T PRK06823 190 ---AHAANLIVTTTPSREPL-LQAEDIQPGTHITAVGADSP 226 (315)
T ss_pred ---hcCCCEEEEecCCCCce-eCHHHcCCCcEEEecCCCCc
Confidence 25899999988764322 22357889999998886543
No 422
>PRK14982 acyl-ACP reductase; Provisional
Probab=93.52 E-value=0.4 Score=43.60 Aligned_cols=94 Identities=19% Similarity=0.175 Sum_probs=58.8
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCce
Q 017868 180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d 257 (365)
-.+.+|+|+|+ |.+|..++..++...|...++.+.++.++.+.+ ++++.... .+ +.+. -..+|
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i-------~~----l~~~----l~~aD 217 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI-------LS----LEEA----LPEAD 217 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH-------Hh----HHHH----HccCC
Confidence 36789999998 899999999665556777888888877776543 44431110 11 2222 14689
Q ss_pred EEEeCCCCHHHHHHHHHhcccCCEEEEEccC
Q 017868 258 VSFDCAGLNKTMSTALGATCAGGKVCLVGMG 288 (365)
Q Consensus 258 ~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~ 288 (365)
+|+.+++.+.....--..+.+.-.++.++.+
T Consensus 218 iVv~~ts~~~~~~I~~~~l~~~~~viDiAvP 248 (340)
T PRK14982 218 IVVWVASMPKGVEIDPETLKKPCLMIDGGYP 248 (340)
T ss_pred EEEECCcCCcCCcCCHHHhCCCeEEEEecCC
Confidence 9999888643321222345555556666643
No 423
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=93.52 E-value=0.95 Score=38.90 Aligned_cols=83 Identities=18% Similarity=0.258 Sum_probs=44.2
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-H---HHHcCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-V---AKEIGADN-IVKVSTN-LQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~---~~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~ 253 (365)
++.++||+|+ |.+|..++..++ ..|+++++...+.+++.+ . ++..+... .+..+-. ..++.+.++++.+. .
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~-~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLA-AQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE-F 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence 3568999987 999999999554 569965455443333222 2 22223222 1211221 12222233333221 2
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
.++|.+|.++|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 478999998873
No 424
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=93.51 E-value=0.25 Score=43.73 Aligned_cols=47 Identities=32% Similarity=0.363 Sum_probs=38.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcC
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIG 227 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g 227 (365)
.+++++||.|+|+.+.+++. .+...|++.+.++.++.+|.+. ++.++
T Consensus 124 ~~~~~vlilGAGGAarAv~~-aL~~~g~~~i~V~NRt~~ra~~La~~~~ 171 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAF-ALAEAGAKRITVVNRTRERAEELADLFG 171 (283)
T ss_pred cCCCEEEEECCcHHHHHHHH-HHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 36899999999999999999 6678898889999898888654 45555
No 425
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=93.51 E-value=0.84 Score=41.31 Aligned_cols=81 Identities=23% Similarity=0.385 Sum_probs=47.4
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCC-CCeEEEEeCChhHHH-HHHHcCC--C--EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFG-APRIVIVDVDDYRLS-VAKEIGA--D--NIVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~-~~~~~g~--~--~~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
+.++||+|+ +++|.++++.++ ..| + +|+.+.+++++.+ ..+++.. . ..+..+- +..+....+.++.+. .
T Consensus 3 ~k~vlITGas~GIG~aia~~L~-~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~ 79 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALA-ATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRES-G 79 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHH-HcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHh-C
Confidence 568999987 899999998454 558 6 5666667666543 3344432 1 1122222 222333333333222 3
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|++|.++|.
T Consensus 80 ~~iD~lI~nAG~ 91 (314)
T TIGR01289 80 RPLDALVCNAAV 91 (314)
T ss_pred CCCCEEEECCCc
Confidence 579999998773
No 426
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=93.49 E-value=1.8 Score=37.99 Aligned_cols=105 Identities=18% Similarity=0.221 Sum_probs=64.9
Q ss_pred HHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEeCCCCcccHHHHHHHHHHH
Q 017868 173 ACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 173 ~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
.+...++.++.+||=.|+|. |..+.. +++..++ .+++++.+++..+.+++.... ..+.+.. .+.. +. ..
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~-la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~--~D~~----~~-~~ 113 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKY-INEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA--NDIL----KK-DF 113 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHH-HHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE--CCcc----cC-CC
Confidence 34667889999999998754 555556 6566677 799999998887777653221 1111100 1110 00 01
Q ss_pred hCCCceEEEeCC-----C---CHHHHHHHHHhcccCCEEEEEcc
Q 017868 252 MGTGIDVSFDCA-----G---LNKTMSTALGATCAGGKVCLVGM 287 (365)
Q Consensus 252 ~~~~~d~vid~~-----g---~~~~~~~~~~~l~~~G~~~~~g~ 287 (365)
....+|+|+..- . ....+..+.+.|+|+|.+++...
T Consensus 114 ~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 114 PENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred CCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 135799998621 1 12356678899999999988653
No 427
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=93.48 E-value=1 Score=39.74 Aligned_cols=89 Identities=19% Similarity=0.167 Sum_probs=57.4
Q ss_pred CEEEEEcCCHHHHHHHHHHHHH-CCCCeEEEEeCChhHHH-HHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868 183 TNVLIMGAGPIGLVTMLGAPRA-FGAPRIVIVDVDDYRLS-VAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260 (365)
Q Consensus 183 ~~vlI~G~g~~G~~ai~~l~~~-~g~~~vi~v~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 260 (365)
-+|.|+|.|.+|...++.+.+. .+.+.+.+.++++++.+ ++++++..... .++.+ +. ...|+|+
T Consensus 7 irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~------~~~ee----ll----~~~D~Vv 72 (271)
T PRK13302 7 LRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPV------VPLDQ----LA----THADIVV 72 (271)
T ss_pred eEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCccc------CCHHH----Hh----cCCCEEE
Confidence 5788999999999888845442 46655556676666654 55666643221 12222 21 2479999
Q ss_pred eCCCCHHHHHHHHHhcccCCEEEEE
Q 017868 261 DCAGLNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 261 d~~g~~~~~~~~~~~l~~~G~~~~~ 285 (365)
.|++...+.+....+|..+-.++..
T Consensus 73 i~tp~~~h~e~~~~aL~aGk~Vi~~ 97 (271)
T PRK13302 73 EAAPASVLRAIVEPVLAAGKKAIVL 97 (271)
T ss_pred ECCCcHHHHHHHHHHHHcCCcEEEe
Confidence 9999877766777778766555543
No 428
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=93.47 E-value=1 Score=38.84 Aligned_cols=83 Identities=18% Similarity=0.214 Sum_probs=46.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh-HHHHHH---HcCCCEE-EeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY-RLSVAK---EIGADNI-VKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~-~~~~~~---~~g~~~~-~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
++.++||+|+ |++|..+++.++ ..|+++++...+++. +.+.++ ..+.... +..+- +.++..+.+.+..+. .
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~-~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLH-KDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAE-V 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-h
Confidence 3578899987 999999999554 559865444443333 222333 3343322 11221 222333333333332 3
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|++|.+.|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 589999999874
No 429
>PRK12746 short chain dehydrogenase; Provisional
Probab=93.45 E-value=0.67 Score=40.23 Aligned_cols=84 Identities=19% Similarity=0.313 Sum_probs=46.4
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc---CCC-EEEeCCC-CcccHHHHHHHHHHHh-
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI---GAD-NIVKVST-NLQDIAEEVEKIQKAM- 252 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~---g~~-~~~~~~~-~~~~~~~~i~~~~~~~- 252 (365)
.+.+++|+|+ |.+|..+++.++ ..|+++++.+.++.++.+ ....+ +.. ..+..+- +.+++.+.++++.+..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~-~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLA-NDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 3578999987 999999999554 558854444455555432 22332 221 1222221 2233333333333211
Q ss_pred ----CCCceEEEeCCCC
Q 017868 253 ----GTGIDVSFDCAGL 265 (365)
Q Consensus 253 ----~~~~d~vid~~g~ 265 (365)
..++|++|.+.|.
T Consensus 84 ~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 84 IRVGTSEIDILVNNAGI 100 (254)
T ss_pred cccCCCCccEEEECCCC
Confidence 1469999998873
No 430
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.44 E-value=0.92 Score=40.17 Aligned_cols=82 Identities=17% Similarity=0.181 Sum_probs=53.9
Q ss_pred HHhcCC-CCCCEEEEEcCCH-HHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHH
Q 017868 174 CRRANI-GPETNVLIMGAGP-IGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKA 251 (365)
Q Consensus 174 ~~~~~~-~~g~~vlI~G~g~-~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~ 251 (365)
++..++ -.|.+++|.|.|. +|..++. ++...|+.+ ..+.+.. .++ .+.
T Consensus 149 l~~~~i~l~Gk~vvVIGrs~~VG~pla~-lL~~~gatV-tv~~s~t---------------------~~l----~~~--- 198 (286)
T PRK14175 149 LKHADIDLEGKNAVVIGRSHIVGQPVSK-LLLQKNASV-TILHSRS---------------------KDM----ASY--- 198 (286)
T ss_pred HHHcCCCCCCCEEEEECCCchhHHHHHH-HHHHCCCeE-EEEeCCc---------------------hhH----HHH---
Confidence 344443 4789999999865 9999999 556778854 4433211 122 222
Q ss_pred hCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC
Q 017868 252 MGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 288 (365)
Q Consensus 252 ~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~ 288 (365)
-..+|+||.++|.+..+.. ..++++..++.+|..
T Consensus 199 -~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~ 232 (286)
T PRK14175 199 -LKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNT 232 (286)
T ss_pred -HhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCC
Confidence 1468999999998754443 467888777777754
No 431
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=93.44 E-value=1.2 Score=37.96 Aligned_cols=97 Identities=16% Similarity=0.173 Sum_probs=59.1
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEE---------------EeCCCCcccH
Q 017868 178 NIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNI---------------VKVSTNLQDI 241 (365)
Q Consensus 178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~---------------~~~~~~~~~~ 241 (365)
...++.+||+.|+|. |.-++- ||. .|+ .|++++.++...+.+ ++.+.... ..+..+..++
T Consensus 34 ~~~~~~rvL~~gCG~-G~da~~-LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l 109 (218)
T PRK13255 34 ALPAGSRVLVPLCGK-SLDMLW-LAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFAL 109 (218)
T ss_pred CCCCCCeEEEeCCCC-hHhHHH-HHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCC
Confidence 445678999998864 777777 664 599 699999999877754 34443211 0001111111
Q ss_pred HHHHHHHHHHhCCCceEEEeCCC--------CHHHHHHHHHhcccCCEEEEE
Q 017868 242 AEEVEKIQKAMGTGIDVSFDCAG--------LNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 242 ~~~i~~~~~~~~~~~d~vid~~g--------~~~~~~~~~~~l~~~G~~~~~ 285 (365)
. ......+|.|+|..- ....+..+.++|+++|++.++
T Consensus 110 ~-------~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 110 T-------AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred C-------cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 0 001247899999542 123466788899999976554
No 432
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=93.43 E-value=0.58 Score=40.93 Aligned_cols=81 Identities=17% Similarity=0.233 Sum_probs=43.7
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHHCCCCeEEEEeCC------hhHHHHHHH-cCCCEEEeCCC-CcccHHHHHHHHH
Q 017868 181 PETNVLIMGA---GPIGLVTMLGAPRAFGAPRIVIVDVD------DYRLSVAKE-IGADNIVKVST-NLQDIAEEVEKIQ 249 (365)
Q Consensus 181 ~g~~vlI~G~---g~~G~~ai~~l~~~~g~~~vi~v~~~------~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~i~~~~ 249 (365)
.+.++||+|+ +++|.+++..++ ..|++ |+.+.++ ++..+.+.+ .+....+..+- +.++..+.+++..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la-~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~ 82 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLH-AAGAE-LGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK 82 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHH-HCCCE-EEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence 4678999986 489999999555 56995 4444222 122222222 12111222222 2233344444443
Q ss_pred HHhCCCceEEEeCCC
Q 017868 250 KAMGTGIDVSFDCAG 264 (365)
Q Consensus 250 ~~~~~~~d~vid~~g 264 (365)
+. .+++|+++.+.|
T Consensus 83 ~~-~g~iD~lv~nag 96 (258)
T PRK07370 83 QK-WGKLDILVHCLA 96 (258)
T ss_pred HH-cCCCCEEEEccc
Confidence 32 357999999887
No 433
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.42 E-value=0.29 Score=46.72 Aligned_cols=42 Identities=14% Similarity=0.216 Sum_probs=32.2
Q ss_pred hcCCCCCCEEE----EEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH
Q 017868 176 RANIGPETNVL----IMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR 219 (365)
Q Consensus 176 ~~~~~~g~~vl----I~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~ 219 (365)
..++++|+.+| |+|+ |++|.+++| +++..|++ |+++...+.+
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~-~~~~~g~~-v~~~~~~~~~ 74 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAA-LLAGLGYD-VVANNDGGLT 74 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHH-HHhhCCCe-eeecCccccc
Confidence 46778999988 8765 999999999 88899995 5555444443
No 434
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=93.42 E-value=0.84 Score=39.45 Aligned_cols=80 Identities=26% Similarity=0.224 Sum_probs=44.2
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868 183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTG 255 (365)
Q Consensus 183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~ 255 (365)
.++||+|+ +++|..+++.++ ..|+++++...+++++.+. ++..+... .+..+- +..++...++++.+. -++
T Consensus 3 k~ilItGas~giG~~la~~l~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~ 80 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAA-ARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSA-FGR 80 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHh-cCC
Confidence 47899987 999999999565 4588654444455444322 22233221 222221 122333333333322 357
Q ss_pred ceEEEeCCC
Q 017868 256 IDVSFDCAG 264 (365)
Q Consensus 256 ~d~vid~~g 264 (365)
+|++|.++|
T Consensus 81 id~li~~ag 89 (248)
T PRK06947 81 LDALVNNAG 89 (248)
T ss_pred CCEEEECCc
Confidence 999999887
No 435
>PRK06101 short chain dehydrogenase; Provisional
Probab=93.41 E-value=0.81 Score=39.45 Aligned_cols=41 Identities=27% Similarity=0.279 Sum_probs=30.7
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH
Q 017868 183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE 225 (365)
Q Consensus 183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~ 225 (365)
.++||+|+ |++|..++..++ ..|+ .|+.+++++++.+.+.+
T Consensus 2 ~~vlItGas~giG~~la~~L~-~~G~-~V~~~~r~~~~~~~~~~ 43 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYA-KQGW-QVIACGRNQSVLDELHT 43 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHH-hCCC-EEEEEECCHHHHHHHHH
Confidence 46899987 999999888455 5698 57777888777665544
No 436
>PRK07411 hypothetical protein; Validated
Probab=93.37 E-value=1 Score=42.09 Aligned_cols=34 Identities=41% Similarity=0.540 Sum_probs=28.5
Q ss_pred CCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 182 ETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 182 g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
..+|||.|+|++|..+++ .+-..|..++..+|.+
T Consensus 38 ~~~VlivG~GGlG~~va~-~La~~Gvg~l~lvD~D 71 (390)
T PRK07411 38 AASVLCIGTGGLGSPLLL-YLAAAGIGRIGIVDFD 71 (390)
T ss_pred cCcEEEECCCHHHHHHHH-HHHHcCCCEEEEECCC
Confidence 468999999999999999 5557799988888654
No 437
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.35 E-value=0.77 Score=39.44 Aligned_cols=81 Identities=21% Similarity=0.370 Sum_probs=46.8
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-H---HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCC
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-A---KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~---~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~ 254 (365)
+.++||.|+ |.+|..++..+ ...|+ .|+.+++++++.+. . +..+... .+..+- +..++.+.++.+.+. -+
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L-~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 83 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIAL-AKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE-LG 83 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence 578999987 89999999845 46698 57777777655432 2 2223211 122222 122333333333221 35
Q ss_pred CceEEEeCCCC
Q 017868 255 GIDVSFDCAGL 265 (365)
Q Consensus 255 ~~d~vid~~g~ 265 (365)
++|.+|.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (239)
T PRK07666 84 SIDILINNAGI 94 (239)
T ss_pred CccEEEEcCcc
Confidence 79999998863
No 438
>PRK05599 hypothetical protein; Provisional
Probab=93.30 E-value=1 Score=38.98 Aligned_cols=78 Identities=18% Similarity=0.221 Sum_probs=45.8
Q ss_pred EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-H---HcCCC--EEEeCCC-CcccHHHHHHHHHHHhCCC
Q 017868 184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-K---EIGAD--NIVKVST-NLQDIAEEVEKIQKAMGTG 255 (365)
Q Consensus 184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~---~~g~~--~~~~~~~-~~~~~~~~i~~~~~~~~~~ 255 (365)
++||+|+ +++|.+.+..++ . |. +|+.+.+++++.+.+ + +.+.. ..+..+- +.++..+.+.++.+. .++
T Consensus 2 ~vlItGas~GIG~aia~~l~-~-g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~ 77 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-H-GE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQEL-AGE 77 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-C-CC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHh-cCC
Confidence 6899987 999999998565 4 87 566667777665432 2 33432 2222222 223333333333332 357
Q ss_pred ceEEEeCCCC
Q 017868 256 IDVSFDCAGL 265 (365)
Q Consensus 256 ~d~vid~~g~ 265 (365)
+|+++.+.|.
T Consensus 78 id~lv~nag~ 87 (246)
T PRK05599 78 ISLAVVAFGI 87 (246)
T ss_pred CCEEEEecCc
Confidence 9999988773
No 439
>PRK08291 ectoine utilization protein EutC; Validated
Probab=93.29 E-value=1.9 Score=39.39 Aligned_cols=95 Identities=15% Similarity=0.201 Sum_probs=59.4
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHc----CCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEI----GADNIVKVSTNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~----g~~~~~~~~~~~~~~~~~i~~~~~~~~~ 254 (365)
+...+++|.|+|..|.+.+..++...+.+.+.+.+++.++.+. ++++ +.. +..+ .++.+.+ .
T Consensus 130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~----~d~~~al--------~ 196 (330)
T PRK08291 130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVA----RDVHEAV--------A 196 (330)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEe----CCHHHHH--------c
Confidence 4456899999999999877745445678888888888887653 3433 332 2111 2222222 3
Q ss_pred CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC
Q 017868 255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 288 (365)
Q Consensus 255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~ 288 (365)
..|+|+.++.....+- ....++++-++..+|..
T Consensus 197 ~aDiVi~aT~s~~p~i-~~~~l~~g~~v~~vg~d 229 (330)
T PRK08291 197 GADIIVTTTPSEEPIL-KAEWLHPGLHVTAMGSD 229 (330)
T ss_pred cCCEEEEeeCCCCcEe-cHHHcCCCceEEeeCCC
Confidence 5899999887542211 12346777777777643
No 440
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=93.29 E-value=1.2 Score=41.26 Aligned_cols=35 Identities=31% Similarity=0.528 Sum_probs=29.2
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
...+|||.|+|++|..++. .+...|...+..+|.+
T Consensus 40 ~~~~VliiG~GglG~~v~~-~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQ-SLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHH-HHHHcCCCEEEEEeCC
Confidence 4568999999999999999 5556799888888765
No 441
>PRK05650 short chain dehydrogenase; Provisional
Probab=93.25 E-value=1.2 Score=39.08 Aligned_cols=79 Identities=23% Similarity=0.323 Sum_probs=44.7
Q ss_pred EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-H---HHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868 184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-A---KEIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~---~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~ 256 (365)
++||+|+ |++|..++..++ ..|++ |+.++++.++.+. . +..+... .+..+- +..++.+.+..+.. ..+++
T Consensus 2 ~vlVtGasggIG~~la~~l~-~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~-~~~~i 78 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWA-REGWR-LALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEE-KWGGI 78 (270)
T ss_pred EEEEecCCChHHHHHHHHHH-HCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH-HcCCC
Confidence 6899987 999999998555 45984 6666676665432 2 2223222 122221 11222222322222 13579
Q ss_pred eEEEeCCCC
Q 017868 257 DVSFDCAGL 265 (365)
Q Consensus 257 d~vid~~g~ 265 (365)
|++|.+.|.
T Consensus 79 d~lI~~ag~ 87 (270)
T PRK05650 79 DVIVNNAGV 87 (270)
T ss_pred CEEEECCCC
Confidence 999998873
No 442
>PRK09135 pteridine reductase; Provisional
Probab=93.23 E-value=1.2 Score=38.27 Aligned_cols=81 Identities=16% Similarity=0.108 Sum_probs=44.1
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC-hhHHHHH----HHcCC--CEEEeCCC-CcccHHHHHHHHHHH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD-DYRLSVA----KEIGA--DNIVKVST-NLQDIAEEVEKIQKA 251 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~-~~~~~~~----~~~g~--~~~~~~~~-~~~~~~~~i~~~~~~ 251 (365)
.+.++||+|+ |.+|..++..++ ..|++ ++.++++ +++.+.+ ..... ...+..+- +.+++...++.+.+.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~-~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 82 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLH-AAGYR-VAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAA 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-HCCCE-EEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4578999987 999999999555 55984 6666554 3333221 12211 11122121 112222233332221
Q ss_pred hCCCceEEEeCCC
Q 017868 252 MGTGIDVSFDCAG 264 (365)
Q Consensus 252 ~~~~~d~vid~~g 264 (365)
-+++|++|.++|
T Consensus 83 -~~~~d~vi~~ag 94 (249)
T PRK09135 83 -FGRLDALVNNAS 94 (249)
T ss_pred -cCCCCEEEECCC
Confidence 357899999887
No 443
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=93.22 E-value=1.1 Score=41.39 Aligned_cols=83 Identities=19% Similarity=0.113 Sum_probs=47.8
Q ss_pred CCCCEEEEEcC-CHHHHH--HHHHHHHHCCCCeEEEEeCCh---h-------------HHHHHHHcCCCE-EEeCCC-Cc
Q 017868 180 GPETNVLIMGA-GPIGLV--TMLGAPRAFGAPRIVIVDVDD---Y-------------RLSVAKEIGADN-IVKVST-NL 238 (365)
Q Consensus 180 ~~g~~vlI~G~-g~~G~~--ai~~l~~~~g~~~vi~v~~~~---~-------------~~~~~~~~g~~~-~~~~~~-~~ 238 (365)
.-++++||+|+ +++|.+ .++ .+ ..|+. ++++.... + -.+.+++.|... .+..+- +.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~-al-~~GA~-Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~ 115 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAA-AF-GAGAD-TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSD 115 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHH-HH-HcCCe-EEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCH
Confidence 34578899987 899999 455 44 67995 55554221 1 123456666542 233222 22
Q ss_pred ccHHHHHHHHHHHhCCCceEEEeCCCCH
Q 017868 239 QDIAEEVEKIQKAMGTGIDVSFDCAGLN 266 (365)
Q Consensus 239 ~~~~~~i~~~~~~~~~~~d~vid~~g~~ 266 (365)
++....+.++.+. -+++|+++.+++.+
T Consensus 116 E~v~~lie~I~e~-~G~IDiLVnSaA~~ 142 (398)
T PRK13656 116 EIKQKVIELIKQD-LGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHHh-cCCCCEEEECCccC
Confidence 3334444444443 35799999988754
No 444
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=93.20 E-value=0.54 Score=41.15 Aligned_cols=95 Identities=19% Similarity=0.282 Sum_probs=59.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHc----CCCE-EEeCCCCcccHHHHHHHHHHHhCC
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEI----GADN-IVKVSTNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~----g~~~-~~~~~~~~~~~~~~i~~~~~~~~~ 254 (365)
.++.+||-.|+|. |..+.. +++. |. .|++++.+++..+.+++. |... +..... +.. ++......
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~-la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~---d~~----~l~~~~~~ 111 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIK-LAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC---AAQ----DIAQHLET 111 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHH-HHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc---CHH----HHhhhcCC
Confidence 4567888888764 777777 6654 76 689999999887766543 3221 111111 111 11111246
Q ss_pred CceEEEeCCC-----C-HHHHHHHHHhcccCCEEEEE
Q 017868 255 GIDVSFDCAG-----L-NKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 255 ~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~~~~ 285 (365)
.+|+|+.... . ...+..+.+.|+++|.++..
T Consensus 112 ~fD~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 112 PVDLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred CCCEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence 8999985321 1 23567888999999999765
No 445
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=93.19 E-value=2.1 Score=40.60 Aligned_cols=103 Identities=18% Similarity=0.243 Sum_probs=61.3
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHH
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAF-GAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQ 249 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~-g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~ 249 (365)
...++++|++||=.|+|+ |..+++ ++..+ +...|+++|.++++.+.+ +++|...+.....+..++ ...
T Consensus 231 ~~l~~~~g~~VLD~cagp-Ggkt~~-la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~Da~~l----~~~- 303 (431)
T PRK14903 231 LLMELEPGLRVLDTCAAP-GGKTTA-IAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIADAERL----TEY- 303 (431)
T ss_pred HHhCCCCCCEEEEeCCCc-cHHHHH-HHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECchhhh----hhh-
Confidence 345778999988876643 434444 44444 233799999999987654 556765432222222222 111
Q ss_pred HHhCCCceEEEe---CCCCH-------------------------HHHHHHHHhcccCCEEEEEc
Q 017868 250 KAMGTGIDVSFD---CAGLN-------------------------KTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 250 ~~~~~~~d~vid---~~g~~-------------------------~~~~~~~~~l~~~G~~~~~g 286 (365)
....+|.|+- |+|.. ..+..+++.|+++|.++...
T Consensus 304 --~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 366 (431)
T PRK14903 304 --VQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYST 366 (431)
T ss_pred --hhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 1356999874 44421 23557888999999987653
No 446
>PLN02244 tocopherol O-methyltransferase
Probab=93.19 E-value=2.1 Score=39.30 Aligned_cols=96 Identities=14% Similarity=0.209 Sum_probs=59.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH----cCCCE-EEeCCCCcccHHHHHHHHHHHhCC
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE----IGADN-IVKVSTNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~----~g~~~-~~~~~~~~~~~~~~i~~~~~~~~~ 254 (365)
+++++||=.|+|. |..+.. +++..|+ .|++++.++...+.+++ .+... +.....+..++ ....+
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~-La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~--------~~~~~ 185 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRY-LARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQ--------PFEDG 185 (340)
T ss_pred CCCCeEEEecCCC-CHHHHH-HHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccC--------CCCCC
Confidence 6889998888754 556666 6666677 79999999876655443 34321 11111111111 00135
Q ss_pred CceEEEeCCC-----C-HHHHHHHHHhcccCCEEEEEc
Q 017868 255 GIDVSFDCAG-----L-NKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 255 ~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~~~~g 286 (365)
.+|+|+.... . ...+..+.++|+++|++++..
T Consensus 186 ~FD~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~ 223 (340)
T PLN02244 186 QFDLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVT 223 (340)
T ss_pred CccEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 7999986322 1 245668889999999998764
No 447
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=93.19 E-value=1.2 Score=41.64 Aligned_cols=35 Identities=37% Similarity=0.546 Sum_probs=28.5
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
...+|||.|+|++|..++. .+.+.|...+..+|.+
T Consensus 41 ~~~~VlviG~GGlGs~va~-~La~~Gvg~i~lvD~D 75 (392)
T PRK07878 41 KNARVLVIGAGGLGSPTLL-YLAAAGVGTLGIVEFD 75 (392)
T ss_pred hcCCEEEECCCHHHHHHHH-HHHHcCCCeEEEECCC
Confidence 3468999999999999999 5557799888888654
No 448
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=93.18 E-value=1.1 Score=38.73 Aligned_cols=83 Identities=17% Similarity=0.230 Sum_probs=45.7
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHH---HcCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAK---EIGADN-IVKVSTN-LQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~---~~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~ 253 (365)
.+.++||+|+ |.+|..++..++ ..|+++++...+++++.+ ..+ ..+... .+..+-. .+++.+.+++..+. -
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~-~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 82 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALA-QEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH-F 82 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-HcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence 3679999987 999999999555 569864443344444332 222 233221 2222222 22333333333322 2
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+.+|++|.++|.
T Consensus 83 ~~id~vi~~ag~ 94 (247)
T PRK12935 83 GKVDILVNNAGI 94 (247)
T ss_pred CCCCEEEECCCC
Confidence 468999998874
No 449
>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]
Probab=93.14 E-value=1.1 Score=37.88 Aligned_cols=87 Identities=21% Similarity=0.268 Sum_probs=56.5
Q ss_pred EEEEEcCCHHHHHHHHHHHHH--CCCCeEEEEeCChhHHHHHH-HcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868 184 NVLIMGAGPIGLVTMLGAPRA--FGAPRIVIVDVDDYRLSVAK-EIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260 (365)
Q Consensus 184 ~vlI~G~g~~G~~ai~~l~~~--~g~~~vi~v~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 260 (365)
+|.+.|+|.+|...+. +.+. ..++.+++.+++.+|...+. .++...+. ++.+.+ ..+|+++
T Consensus 2 ~vgiVGcGaIG~~l~e-~v~~~~~~~e~v~v~D~~~ek~~~~~~~~~~~~~s-------~ide~~--------~~~DlvV 65 (255)
T COG1712 2 KVGIVGCGAIGKFLLE-LVRDGRVDFELVAVYDRDEEKAKELEASVGRRCVS-------DIDELI--------AEVDLVV 65 (255)
T ss_pred eEEEEeccHHHHHHHH-HHhcCCcceeEEEEecCCHHHHHHHHhhcCCCccc-------cHHHHh--------hccceee
Confidence 5778899999999999 5543 34778888899888877554 45543321 121221 3577888
Q ss_pred eCCCCHHHHHHHHHhcccCCEEEEEc
Q 017868 261 DCAGLNKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 261 d~~g~~~~~~~~~~~l~~~G~~~~~g 286 (365)
+|++.....+...+.|..+=.++.++
T Consensus 66 EaAS~~Av~e~~~~~L~~g~d~iV~S 91 (255)
T COG1712 66 EAASPEAVREYVPKILKAGIDVIVMS 91 (255)
T ss_pred eeCCHHHHHHHhHHHHhcCCCEEEEe
Confidence 88776655556666777655554443
No 450
>PRK07775 short chain dehydrogenase; Provisional
Probab=93.13 E-value=1 Score=39.76 Aligned_cols=81 Identities=19% Similarity=0.211 Sum_probs=45.1
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-H---HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCC
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-V---AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~---~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~ 254 (365)
..++||+|+ |.+|.++++.++ ..|+ .|+++.++.++.+ . ++..+... .+..+- +.+++.+.++...+. -+
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~-~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 86 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELA-AAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEA-LG 86 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHh-cC
Confidence 458999987 999999999555 5698 4666666555433 2 22234322 112221 122222333332221 24
Q ss_pred CceEEEeCCCC
Q 017868 255 GIDVSFDCAGL 265 (365)
Q Consensus 255 ~~d~vid~~g~ 265 (365)
++|++|.++|.
T Consensus 87 ~id~vi~~Ag~ 97 (274)
T PRK07775 87 EIEVLVSGAGD 97 (274)
T ss_pred CCCEEEECCCc
Confidence 78999998874
No 451
>PRK06940 short chain dehydrogenase; Provisional
Probab=93.12 E-value=0.93 Score=40.08 Aligned_cols=78 Identities=21% Similarity=0.297 Sum_probs=45.5
Q ss_pred CEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHH---cCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868 183 TNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKE---IGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 183 ~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~---~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~ 256 (365)
+++||+|+|++|.+++..+ . .|+ .|+.+++++++.+ ..++ .+... .+..+- +.++..+.+.+. +. -+++
T Consensus 3 k~~lItGa~gIG~~la~~l-~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~-~g~i 77 (275)
T PRK06940 3 EVVVVIGAGGIGQAIARRV-G-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QT-LGPV 77 (275)
T ss_pred CEEEEECCChHHHHHHHHH-h-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hh-cCCC
Confidence 5778889999999999955 3 588 5677777765543 2222 23221 222222 222333333333 21 3579
Q ss_pred eEEEeCCCC
Q 017868 257 DVSFDCAGL 265 (365)
Q Consensus 257 d~vid~~g~ 265 (365)
|++|.++|.
T Consensus 78 d~li~nAG~ 86 (275)
T PRK06940 78 TGLVHTAGV 86 (275)
T ss_pred CEEEECCCc
Confidence 999998874
No 452
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=93.08 E-value=0.49 Score=45.47 Aligned_cols=77 Identities=22% Similarity=0.327 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCCh---------------------hHHHHHHHcCCCEEEeCCCCcc
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDD---------------------YRLSVAKEIGADNIVKVSTNLQ 239 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~---------------------~~~~~~~~~g~~~~~~~~~~~~ 239 (365)
.+++|+|.|+|+.|+.++. .++..|.+ |+..+..+ ...+.++++|++...+..- ..
T Consensus 140 ~~~~V~IIG~GpaGl~aA~-~l~~~G~~-V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v-~~ 216 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACAD-ILARAGVQ-VVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV-GR 216 (467)
T ss_pred CCCeEEEECCCHHHHHHHH-HHHHcCCe-EEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe-CC
Confidence 6789999999999999999 66677995 55565443 2456778888765332110 11
Q ss_pred cHHHHHHHHHHHhCCCceEEEeCCCCH
Q 017868 240 DIAEEVEKIQKAMGTGIDVSFDCAGLN 266 (365)
Q Consensus 240 ~~~~~i~~~~~~~~~~~d~vid~~g~~ 266 (365)
+. .+... ..++|.||.++|..
T Consensus 217 ~~--~~~~~----~~~~D~vilAtGa~ 237 (467)
T TIGR01318 217 DI--SLDDL----LEDYDAVFLGVGTY 237 (467)
T ss_pred cc--CHHHH----HhcCCEEEEEeCCC
Confidence 11 11222 13699999999964
No 453
>PRK14901 16S rRNA methyltransferase B; Provisional
Probab=93.06 E-value=1.3 Score=42.20 Aligned_cols=105 Identities=22% Similarity=0.269 Sum_probs=60.6
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHH----HHHcCCCEEEeCCCCcccHHHHHHHHH
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSV----AKEIGADNIVKVSTNLQDIAEEVEKIQ 249 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~i~~~~ 249 (365)
....+++|++||=.|+|+ |..+.. +++.++ ...+++++.++++.+. ++.+|...+.....+..++....
T Consensus 246 ~~l~~~~g~~VLDl~ag~-G~kt~~-la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~D~~~~~~~~---- 319 (434)
T PRK14901 246 PLLDPQPGEVILDACAAP-GGKTTH-IAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAADSRNLLELK---- 319 (434)
T ss_pred HHhCCCCcCEEEEeCCCC-chhHHH-HHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeCChhhccccc----
Confidence 345678899988876533 333344 333333 2379999999987754 45577765433222222211000
Q ss_pred HHhCCCceEEE-e--CCCC-------------------------HHHHHHHHHhcccCCEEEEE
Q 017868 250 KAMGTGIDVSF-D--CAGL-------------------------NKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 250 ~~~~~~~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~G~~~~~ 285 (365)
......+|.|+ | |+|. ...+..+++.|+++|+++..
T Consensus 320 ~~~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvys 383 (434)
T PRK14901 320 PQWRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYA 383 (434)
T ss_pred ccccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 00135689987 3 4542 13466788899999998754
No 454
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=93.02 E-value=0.9 Score=39.30 Aligned_cols=84 Identities=21% Similarity=0.330 Sum_probs=49.4
Q ss_pred CCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH----HHHcCCCE--EE--eCCC-CcccHHHHHHHH
Q 017868 179 IGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV----AKEIGADN--IV--KVST-NLQDIAEEVEKI 248 (365)
Q Consensus 179 ~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~----~~~~g~~~--~~--~~~~-~~~~~~~~i~~~ 248 (365)
..++.++||+|+ |.+|..+++.++ ..|+ .|++++++.++.+. +++.+... .+ +++. +..++.+....+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~-~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYA-RHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHH-HCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 457889999987 999999999565 4698 56777777655322 22333221 12 2211 123333333333
Q ss_pred HHHhCCCceEEEeCCCC
Q 017868 249 QKAMGTGIDVSFDCAGL 265 (365)
Q Consensus 249 ~~~~~~~~d~vid~~g~ 265 (365)
.+. .+++|.+|.++|.
T Consensus 87 ~~~-~~~id~vi~~Ag~ 102 (247)
T PRK08945 87 EEQ-FGRLDGVLHNAGL 102 (247)
T ss_pred HHH-hCCCCEEEECCcc
Confidence 332 3579999988763
No 455
>PRK12744 short chain dehydrogenase; Provisional
Probab=93.00 E-value=0.99 Score=39.32 Aligned_cols=83 Identities=18% Similarity=0.177 Sum_probs=43.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC---hhHH-HH---HHHcCCCE-EEeCCC-CcccHHHHHHHHHH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD---DYRL-SV---AKEIGADN-IVKVST-NLQDIAEEVEKIQK 250 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~---~~~~-~~---~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~ 250 (365)
.+.++||+|+ |++|.++++.+ ...|+++++...+. .++. +. ++..+... .+..+- +.++....+.+..+
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l-~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 85 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDL-AAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA 85 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHH-HHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence 4678999987 99999999955 45698644443222 1221 22 22234321 222222 11222222333222
Q ss_pred HhCCCceEEEeCCCC
Q 017868 251 AMGTGIDVSFDCAGL 265 (365)
Q Consensus 251 ~~~~~~d~vid~~g~ 265 (365)
. .+++|++|.++|.
T Consensus 86 ~-~~~id~li~~ag~ 99 (257)
T PRK12744 86 A-FGRPDIAINTVGK 99 (257)
T ss_pred h-hCCCCEEEECCcc
Confidence 1 3579999998874
No 456
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=92.90 E-value=1.4 Score=36.88 Aligned_cols=35 Identities=17% Similarity=0.228 Sum_probs=28.8
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
...+|+|.|+|++|..++. .+-..|...+..+|.+
T Consensus 20 ~~s~VlIiG~gglG~evak-~La~~GVg~i~lvD~d 54 (197)
T cd01492 20 RSARILLIGLKGLGAEIAK-NLVLSGIGSLTILDDR 54 (197)
T ss_pred HhCcEEEEcCCHHHHHHHH-HHHHcCCCEEEEEECC
Confidence 3468999999999999999 5567799988888654
No 457
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=92.90 E-value=1 Score=40.88 Aligned_cols=79 Identities=18% Similarity=0.302 Sum_probs=43.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
++.+|||+|+ |.+|..+++.+++.-+...|+++++++.+.+. .+.+....+..+..+-.+. +.+.+.. .++|+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~-~~l~~~~----~~iD~ 77 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDK-ERLTRAL----RGVDY 77 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCH-HHHHHHH----hcCCE
Confidence 3678999987 99999999956554222356777666554432 2333221111111111222 2233332 35899
Q ss_pred EEeCCC
Q 017868 259 SFDCAG 264 (365)
Q Consensus 259 vid~~g 264 (365)
||.++|
T Consensus 78 Vih~Ag 83 (324)
T TIGR03589 78 VVHAAA 83 (324)
T ss_pred EEECcc
Confidence 999876
No 458
>PRK13304 L-aspartate dehydrogenase; Reviewed
Probab=92.88 E-value=1.5 Score=38.61 Aligned_cols=87 Identities=20% Similarity=0.256 Sum_probs=54.4
Q ss_pred EEEEEcCCHHHHHHHHHHHHHC-CCCeEEEEeCChhHHHH-HHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEe
Q 017868 184 NVLIMGAGPIGLVTMLGAPRAF-GAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFD 261 (365)
Q Consensus 184 ~vlI~G~g~~G~~ai~~l~~~~-g~~~vi~v~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid 261 (365)
+|.|.|+|.+|...++.+.+.. +.+.+.+++++.++.+. .+.++... + .++.+ +. ..+|+|++
T Consensus 3 rIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~~---~----~~~~e----ll----~~~DvVvi 67 (265)
T PRK13304 3 KIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAKA---C----LSIDE----LV----EDVDLVVE 67 (265)
T ss_pred EEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCee---E----CCHHH----Hh----cCCCEEEE
Confidence 6889999999998888444332 46556667777766554 34555321 1 12222 21 36899999
Q ss_pred CCCCHHHHHHHHHhcccCCEEEEE
Q 017868 262 CAGLNKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 262 ~~g~~~~~~~~~~~l~~~G~~~~~ 285 (365)
|++...+.+....++..+-.++..
T Consensus 68 ~a~~~~~~~~~~~al~~Gk~Vvv~ 91 (265)
T PRK13304 68 CASVNAVEEVVPKSLENGKDVIIM 91 (265)
T ss_pred cCChHHHHHHHHHHHHcCCCEEEE
Confidence 988766666677777755445443
No 459
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=92.84 E-value=0.77 Score=39.41 Aligned_cols=80 Identities=23% Similarity=0.255 Sum_probs=43.2
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeC-ChhHHH-HHHHc---CCC-EEEeCCC-CcccHHHHHHHHHHHhCC
Q 017868 183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDV-DDYRLS-VAKEI---GAD-NIVKVST-NLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~-~~~~~~-~~~~~---g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~ 254 (365)
.++||+|+ |++|..++..+ ...|++ ++++.+ ++++.+ ...++ +.. ..+..+- +..++...+.++.+. .+
T Consensus 1 k~~lItG~sg~iG~~la~~l-~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~ 77 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRL-AKDGYR-VAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAE-LG 77 (242)
T ss_pred CEEEEECCCChHHHHHHHHH-HHCCCE-EEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-cC
Confidence 36899987 99999999955 456985 555544 443322 22222 211 1122221 122333333333332 35
Q ss_pred CceEEEeCCCC
Q 017868 255 GIDVSFDCAGL 265 (365)
Q Consensus 255 ~~d~vid~~g~ 265 (365)
.+|++|.+.|.
T Consensus 78 ~id~vi~~ag~ 88 (242)
T TIGR01829 78 PIDVLVNNAGI 88 (242)
T ss_pred CCcEEEECCCC
Confidence 79999998873
No 460
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=92.83 E-value=0.44 Score=43.79 Aligned_cols=77 Identities=17% Similarity=0.110 Sum_probs=43.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCC--C-EEEeCCCCcccHHHHHHHHHHHhCCC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGA--D-NIVKVSTNLQDIAEEVEKIQKAMGTG 255 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~--~-~~~~~~~~~~~~~~~i~~~~~~~~~~ 255 (365)
+|.+|||+|+ |.+|.++++.++ ..|.+ |+++++++.... ..+.++. . ..+..+- .+. +.+.+..+ ..+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~-~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl--~~~-~~~~~~~~--~~~ 75 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLL-ELGAE-VYGYSLDPPTSPNLFELLNLAKKIEDHFGDI--RDA-AKLRKAIA--EFK 75 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHH-HCCCE-EEEEeCCCccchhHHHHHhhcCCceEEEccC--CCH-HHHHHHHh--hcC
Confidence 4678999987 999999999454 56884 666666554322 2222221 1 1122111 222 22333332 236
Q ss_pred ceEEEeCCC
Q 017868 256 IDVSFDCAG 264 (365)
Q Consensus 256 ~d~vid~~g 264 (365)
+|+||.+++
T Consensus 76 ~d~vih~A~ 84 (349)
T TIGR02622 76 PEIVFHLAA 84 (349)
T ss_pred CCEEEECCc
Confidence 899999887
No 461
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=92.81 E-value=0.56 Score=47.02 Aligned_cols=77 Identities=22% Similarity=0.287 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChh---------------------HHHHHHHcCCCEEEeCCCCcc
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDY---------------------RLSVAKEIGADNIVKVSTNLQ 239 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~---------------------~~~~~~~~g~~~~~~~~~~~~ 239 (365)
.+++|+|+|+|+.|+.++. .++..|++ |++.+..+. +.++++++|++...+..- ..
T Consensus 309 ~~kkVaIIG~GpaGl~aA~-~L~~~G~~-Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v-~~ 385 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCAD-ILARAGVQ-VDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEI-GR 385 (639)
T ss_pred CCCEEEEECcCHHHHHHHH-HHHHcCCc-EEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCcc-CC
Confidence 4899999999999999999 66677995 666665542 456778888765433211 11
Q ss_pred cHHHHHHHHHHHhCCCceEEEeCCCCH
Q 017868 240 DIAEEVEKIQKAMGTGIDVSFDCAGLN 266 (365)
Q Consensus 240 ~~~~~i~~~~~~~~~~~d~vid~~g~~ 266 (365)
+. .+.+. ...+|.||.++|..
T Consensus 386 ~~--~~~~l----~~~~DaV~latGa~ 406 (639)
T PRK12809 386 DI--TFSDL----TSEYDAVFIGVGTY 406 (639)
T ss_pred cC--CHHHH----HhcCCEEEEeCCCC
Confidence 11 11222 24689999999853
No 462
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=92.80 E-value=1.5 Score=38.33 Aligned_cols=82 Identities=17% Similarity=0.302 Sum_probs=46.2
Q ss_pred CCCEEEEEcC---CHHHHHHHHHHHHHCCCCeEEEEeCCh--hH-HHHHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHh
Q 017868 181 PETNVLIMGA---GPIGLVTMLGAPRAFGAPRIVIVDVDD--YR-LSVAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAM 252 (365)
Q Consensus 181 ~g~~vlI~G~---g~~G~~ai~~l~~~~g~~~vi~v~~~~--~~-~~~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~ 252 (365)
.+.++||+|+ +++|.++++.++ ..|+ +|+.++++. +. .+..++++.. ..+..+- +.++....+.+..+.
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la-~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~- 82 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQ-EQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREH- 82 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHH-HCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHH-
Confidence 4678999985 689999999554 5699 466665432 32 2333444421 1222222 222333333333322
Q ss_pred CCCceEEEeCCCC
Q 017868 253 GTGIDVSFDCAGL 265 (365)
Q Consensus 253 ~~~~d~vid~~g~ 265 (365)
.+++|++|.++|.
T Consensus 83 ~g~iD~li~nAG~ 95 (256)
T PRK07889 83 VDGLDGVVHSIGF 95 (256)
T ss_pred cCCCcEEEEcccc
Confidence 3579999998873
No 463
>smart00846 Gp_dh_N Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain. GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.
Probab=92.79 E-value=1.1 Score=35.56 Aligned_cols=100 Identities=23% Similarity=0.271 Sum_probs=55.4
Q ss_pred EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEe-CChhHHHHHHH----cCC-CEEEeCCCC-------------cccHHHH
Q 017868 184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVD-VDDYRLSVAKE----IGA-DNIVKVSTN-------------LQDIAEE 244 (365)
Q Consensus 184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~-~~~~~~~~~~~----~g~-~~~~~~~~~-------------~~~~~~~ 244 (365)
+|.|.|.|.+|..+++.+....+.+.+.+.+ .+.+....+-+ .|. ...+..++. ..+. ..
T Consensus 2 kv~I~G~GriGr~v~~~~~~~~~~~lvai~d~~~~~~~a~ll~~Ds~hg~~~~~v~~~~~~l~i~g~~i~~~~~~~p-~~ 80 (149)
T smart00846 2 KVGINGFGRIGRLVLRALLERPDIEVVAINDLTDPETLAHLLKYDSVHGRFPGEVEVDEDGLIVNGKKIKVLAERDP-AN 80 (149)
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEeecCCCHHHHHHHhcccCCCCCCCCcEEEeCCEEEECCEEEEEEecCCh-HH
Confidence 5788999999999888454455675444455 23444443333 221 111111110 0010 11
Q ss_pred HHHHHHHhCCCceEEEeCCCCHHHHHHHHHhcccCCEEEEEccC
Q 017868 245 VEKIQKAMGTGIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMG 288 (365)
Q Consensus 245 i~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~ 288 (365)
+. |. ..++|+|+||+|.-.....+..++..+.+-++++.+
T Consensus 81 ~~-w~---~~gvDiVie~tG~f~~~~~~~~hl~~GakkViisap 120 (149)
T smart00846 81 LP-WK---ELGVDIVVECTGKFTTREKASAHLKAGAKKVIISAP 120 (149)
T ss_pred Cc-cc---ccCCeEEEeccccccchHHHHHHHHcCCCEEEeCCC
Confidence 11 11 358999999999644445566788877777777543
No 464
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=92.79 E-value=1 Score=39.18 Aligned_cols=39 Identities=21% Similarity=0.120 Sum_probs=28.5
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS 221 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~ 221 (365)
.+.+|||+|+ |.+|..++..++ ..|. .|+++.++.++..
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~-~~g~-~V~~~~R~~~~~~ 55 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLL-AKGF-AVKAGVRDVDKAK 55 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHH-hCCC-EEEEEecCHHHHH
Confidence 3578999997 999999998454 4588 4666666666543
No 465
>COG3963 Phospholipid N-methyltransferase [Lipid metabolism]
Probab=92.78 E-value=4.3 Score=32.67 Aligned_cols=122 Identities=16% Similarity=0.164 Sum_probs=75.8
Q ss_pred hccch-hhHHHHHHHHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCCEEEeCCCCc
Q 017868 161 GAMCE-PLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGADNIVKVSTNL 238 (365)
Q Consensus 161 a~~~~-~~~~a~~~~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~~~~~~~~~~ 238 (365)
.+.+| ...+|-.++...+.+.|-.||-.|.|. |-..=.+|++...-+.+.+++.+.+=...+ +.+....+++ .+.
T Consensus 27 GaI~PsSs~lA~~M~s~I~pesglpVlElGPGT-GV~TkaIL~~gv~~~~L~~iE~~~dF~~~L~~~~p~~~ii~--gda 103 (194)
T COG3963 27 GAILPSSSILARKMASVIDPESGLPVLELGPGT-GVITKAILSRGVRPESLTAIEYSPDFVCHLNQLYPGVNIIN--GDA 103 (194)
T ss_pred eeecCCcHHHHHHHHhccCcccCCeeEEEcCCc-cHhHHHHHhcCCCccceEEEEeCHHHHHHHHHhCCCccccc--cch
Confidence 34444 344555556667889999999998632 333334243444455777777776655444 4455555444 344
Q ss_pred ccHHHHHHHHHHHhCCCceEEEeCCCC--------HHHHHHHHHhcccCCEEEEEccC
Q 017868 239 QDIAEEVEKIQKAMGTGIDVSFDCAGL--------NKTMSTALGATCAGGKVCLVGMG 288 (365)
Q Consensus 239 ~~~~~~i~~~~~~~~~~~d~vid~~g~--------~~~~~~~~~~l~~~G~~~~~g~~ 288 (365)
.++...+.+. .+..+|.||.+.-- -..++..+..++.+|.++.+..+
T Consensus 104 ~~l~~~l~e~---~gq~~D~viS~lPll~~P~~~~iaile~~~~rl~~gg~lvqftYg 158 (194)
T COG3963 104 FDLRTTLGEH---KGQFFDSVISGLPLLNFPMHRRIAILESLLYRLPAGGPLVQFTYG 158 (194)
T ss_pred hhHHHHHhhc---CCCeeeeEEeccccccCcHHHHHHHHHHHHHhcCCCCeEEEEEec
Confidence 4444334333 36789999987652 24677888999999999988654
No 466
>PRK05855 short chain dehydrogenase; Validated
Probab=92.78 E-value=1.1 Score=44.19 Aligned_cols=82 Identities=23% Similarity=0.290 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCC-EEEeCCC-CcccHHHHHHHHHHHhC
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGAD-NIVKVST-NLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~ 253 (365)
.+.++||+|+ |++|.++++.++ ..|++ |+.++++.++.+.+ +..|.. ..+..+- +.++..+.+.++.+. .
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~-~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~ 390 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFA-REGAE-VVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAE-H 390 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHH-HCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHh-c
Confidence 4578999987 999999999554 56995 77777777655432 233432 1222222 222333333333322 3
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|++|.++|.
T Consensus 391 g~id~lv~~Ag~ 402 (582)
T PRK05855 391 GVPDIVVNNAGI 402 (582)
T ss_pred CCCcEEEECCcc
Confidence 579999999874
No 467
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=92.77 E-value=1.2 Score=38.62 Aligned_cols=77 Identities=18% Similarity=0.249 Sum_probs=44.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCC-EEEeCCC-CcccHHHHHHHHHHHhCCCce
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGAD-NIVKVST-NLQDIAEEVEKIQKAMGTGID 257 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~-~~~~~~~-~~~~~~~~i~~~~~~~~~~~d 257 (365)
.++++||+|+ |.+|..++..+ ...|+ .++.++++. ....+.. ..+..+- +.+++.+.+.++.+. .+++|
T Consensus 7 ~~k~vlItGas~~iG~~la~~l-~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id 78 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAF-VEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAE-TGPLD 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHH-HHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence 4678999987 89999999945 45698 566666654 1222221 1122221 223333333333322 35799
Q ss_pred EEEeCCCC
Q 017868 258 VSFDCAGL 265 (365)
Q Consensus 258 ~vid~~g~ 265 (365)
++|.+.|.
T Consensus 79 ~vi~~ag~ 86 (252)
T PRK08220 79 VLVNAAGI 86 (252)
T ss_pred EEEECCCc
Confidence 99998874
No 468
>PRK06701 short chain dehydrogenase; Provisional
Probab=92.75 E-value=1.6 Score=38.99 Aligned_cols=83 Identities=19% Similarity=0.189 Sum_probs=45.9
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh-HH----HHHHHcCCCE-EEeCCCC-cccHHHHHHHHHHH
Q 017868 180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY-RL----SVAKEIGADN-IVKVSTN-LQDIAEEVEKIQKA 251 (365)
Q Consensus 180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~-~~----~~~~~~g~~~-~~~~~~~-~~~~~~~i~~~~~~ 251 (365)
-++.++||+|+ |.+|..++..+++ .|++ |+.+.++++ .. +.++..+... .+..+-. ..++...++++.+.
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~-~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~ 121 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAK-EGAD-IAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE 121 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHH-CCCE-EEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 35678999987 9999999995654 5985 555555432 11 2223333322 2222222 22333333333332
Q ss_pred hCCCceEEEeCCCC
Q 017868 252 MGTGIDVSFDCAGL 265 (365)
Q Consensus 252 ~~~~~d~vid~~g~ 265 (365)
.+++|++|.++|.
T Consensus 122 -~~~iD~lI~~Ag~ 134 (290)
T PRK06701 122 -LGRLDILVNNAAF 134 (290)
T ss_pred -cCCCCEEEECCcc
Confidence 3578999988773
No 469
>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed
Probab=92.74 E-value=2.8 Score=40.09 Aligned_cols=99 Identities=19% Similarity=0.240 Sum_probs=61.4
Q ss_pred CCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHH----HHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868 178 NIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLS----VAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 252 (365)
Q Consensus 178 ~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~ 252 (365)
.+++|++||=..|++ |.-+.+ ++..++ -..+++.+.+..|.+ .++++|+..+.....+...+.. . .
T Consensus 110 ~~~pg~~VLD~CAAP-GgKTt~-la~~l~~~g~lvA~D~~~~R~~~L~~nl~r~G~~nv~v~~~D~~~~~~----~---~ 180 (470)
T PRK11933 110 DDNAPQRVLDMAAAP-GSKTTQ-IAALMNNQGAIVANEYSASRVKVLHANISRCGVSNVALTHFDGRVFGA----A---L 180 (470)
T ss_pred CCCCCCEEEEeCCCc-cHHHHH-HHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCchhhhhh----h---c
Confidence 678999988875433 333444 333433 237899999988864 4677898775544333222211 1 1
Q ss_pred CCCceEEEe---CCCC-------------------------HHHHHHHHHhcccCCEEEEE
Q 017868 253 GTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 253 ~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~~~~ 285 (365)
...||.|+- |+|. ...+..++..|+++|+++..
T Consensus 181 ~~~fD~ILvDaPCSG~G~~rk~p~~~~~~s~~~v~~l~~lQ~~iL~~A~~~LkpGG~LVYS 241 (470)
T PRK11933 181 PETFDAILLDAPCSGEGTVRKDPDALKNWSPESNLEIAATQRELIESAFHALKPGGTLVYS 241 (470)
T ss_pred hhhcCeEEEcCCCCCCcccccCHHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 346888863 6663 13555688899999998653
No 470
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=92.72 E-value=2.5 Score=38.31 Aligned_cols=89 Identities=22% Similarity=0.310 Sum_probs=59.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 260 (365)
.|.++.|.|.|.+|++.+. .++.+|. .|+..+++.. .+..+.+++..+ ++.+.+ ...|++.
T Consensus 145 ~gktvGIiG~GrIG~avA~-r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~--------~l~ell--------~~sDii~ 205 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVAR-RLKGFGM-KVLYYDRSPN-PEAEKELGARYV--------DLDELL--------AESDIIS 205 (324)
T ss_pred CCCEEEEECCCHHHHHHHH-HHhcCCC-EEEEECCCCC-hHHHhhcCceec--------cHHHHH--------HhCCEEE
Confidence 5899999999999999999 7779999 5777766655 444445554432 122222 3467775
Q ss_pred e-CCCCHHHHH----HHHHhcccCCEEEEEccC
Q 017868 261 D-CAGLNKTMS----TALGATCAGGKVCLVGMG 288 (365)
Q Consensus 261 d-~~g~~~~~~----~~~~~l~~~G~~~~~g~~ 288 (365)
- |..++++.+ ..+..|++++.++..+..
T Consensus 206 l~~Plt~~T~hLin~~~l~~mk~ga~lVNtaRG 238 (324)
T COG1052 206 LHCPLTPETRHLINAEELAKMKPGAILVNTARG 238 (324)
T ss_pred EeCCCChHHhhhcCHHHHHhCCCCeEEEECCCc
Confidence 5 444444333 577889999988887654
No 471
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.70 E-value=1.2 Score=40.06 Aligned_cols=81 Identities=25% Similarity=0.364 Sum_probs=44.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCC-hhHH-HH---HHHcCCCEE-EeCCCC-cccHHHHHHHHHHHh
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVD-DYRL-SV---AKEIGADNI-VKVSTN-LQDIAEEVEKIQKAM 252 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~-~~~~-~~---~~~~g~~~~-~~~~~~-~~~~~~~i~~~~~~~ 252 (365)
.+.++||+|+ +++|.+.++.++ ..|++ |+.+++. .++. +. ++..|.... +..+-. .++....+....+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~-~~Ga~-Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-- 86 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLA-RLGAT-VVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-- 86 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCCE-EEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH--
Confidence 4678999987 999999999555 55995 5555543 2222 22 233343221 211111 1222223333323
Q ss_pred CCCceEEEeCCCC
Q 017868 253 GTGIDVSFDCAGL 265 (365)
Q Consensus 253 ~~~~d~vid~~g~ 265 (365)
-+++|++|.++|.
T Consensus 87 ~g~iD~li~nAG~ 99 (306)
T PRK07792 87 LGGLDIVVNNAGI 99 (306)
T ss_pred hCCCCEEEECCCC
Confidence 3589999998873
No 472
>PRK06407 ornithine cyclodeaminase; Provisional
Probab=92.67 E-value=3.8 Score=36.83 Aligned_cols=97 Identities=15% Similarity=0.132 Sum_probs=65.6
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc----CCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI----GADNIVKVSTNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~----g~~~~~~~~~~~~~~~~~i~~~~~~~~~ 254 (365)
+...++.|.|+|.-+.+-++.++...+.+.|.+.+++.++.+ +++++ |... ... .+..+.+ .
T Consensus 115 ~da~~l~iiGaG~QA~~~~~a~~~v~~i~~v~v~~r~~~~a~~f~~~~~~~~~~~v-~~~----~~~~eav--------~ 181 (301)
T PRK06407 115 KNVENFTIIGSGFQAETQLEGMASVYNPKRIRVYSRNFDHARAFAERFSKEFGVDI-RPV----DNAEAAL--------R 181 (301)
T ss_pred cCCcEEEEECCcHHHHHHHHHHHhcCCCCEEEEECCCHHHHHHHHHHHHHhcCCcE-EEe----CCHHHHH--------h
Confidence 455778889999999988886777788999999999988754 44443 4322 221 1222222 5
Q ss_pred CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCCC
Q 017868 255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGHH 290 (365)
Q Consensus 255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~~ 290 (365)
+.|+|+-++.+...+ .....++++-+++.+|...+
T Consensus 182 ~aDIV~taT~s~~P~-~~~~~l~pg~hV~aiGs~~p 216 (301)
T PRK06407 182 DADTITSITNSDTPI-FNRKYLGDEYHVNLAGSNYP 216 (301)
T ss_pred cCCEEEEecCCCCcE-ecHHHcCCCceEEecCCCCC
Confidence 799999988765321 23457889888888886544
No 473
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=92.65 E-value=0.9 Score=43.68 Aligned_cols=81 Identities=21% Similarity=0.343 Sum_probs=52.7
Q ss_pred CCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-----HHcCCCEEEeCCCCcccHHHHHHHHHHHhC
Q 017868 180 GPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-----KEIGADNIVKVSTNLQDIAEEVEKIQKAMG 253 (365)
Q Consensus 180 ~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~ 253 (365)
-.|++|||+|+ |++|...+..+++. +.+.++..+.++.+...+ +.++......+-.+-.|.. .+.+..+ +
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~-~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~-~~~~~~~--~ 323 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKF-NPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRD-RVERAME--G 323 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhc-CCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHH-HHHHHHh--c
Confidence 37899999987 99999888867766 888999999988776433 3333222221112223332 3333333 5
Q ss_pred CCceEEEeCCC
Q 017868 254 TGIDVSFDCAG 264 (365)
Q Consensus 254 ~~~d~vid~~g 264 (365)
.++|+||.++.
T Consensus 324 ~kvd~VfHAAA 334 (588)
T COG1086 324 HKVDIVFHAAA 334 (588)
T ss_pred CCCceEEEhhh
Confidence 68999999775
No 474
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=92.65 E-value=0.76 Score=40.24 Aligned_cols=77 Identities=21% Similarity=0.222 Sum_probs=44.6
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCC-CcccHHHHHHHHHHHhCCCceE
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVST-NLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
.+.++||+|+ |++|.++++ .+...|+ .|+.+++++++.+. .... .+..+- +.+++.+.+....+. -+++|+
T Consensus 8 ~~k~vlItG~s~gIG~~la~-~l~~~G~-~v~~~~~~~~~~~~---~~~~-~~~~D~~~~~~~~~~~~~~~~~-~g~id~ 80 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVK-ELLANGA-NVVNADIHGGDGQH---ENYQ-FVPTDVSSAEEVNHTVAEIIEK-FGRIDG 80 (266)
T ss_pred CCCEEEEeCCCChHHHHHHH-HHHHCCC-EEEEEeCCcccccc---CceE-EEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence 4678999987 999999999 4456698 56666665544221 1111 111111 223333334333332 357999
Q ss_pred EEeCCC
Q 017868 259 SFDCAG 264 (365)
Q Consensus 259 vid~~g 264 (365)
+|.+.|
T Consensus 81 li~~Ag 86 (266)
T PRK06171 81 LVNNAG 86 (266)
T ss_pred EEECCc
Confidence 999887
No 475
>PRK08223 hypothetical protein; Validated
Probab=92.63 E-value=0.35 Score=42.74 Aligned_cols=35 Identities=29% Similarity=0.507 Sum_probs=28.7
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
...+|||.|+|++|..+++ .+.+.|...+..+|.+
T Consensus 26 ~~s~VlIvG~GGLGs~va~-~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 26 RNSRVAIAGLGGVGGIHLL-TLARLGIGKFTIADFD 60 (287)
T ss_pred hcCCEEEECCCHHHHHHHH-HHHHhCCCeEEEEeCC
Confidence 4468999999999999999 5556699888888654
No 476
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=92.62 E-value=6.4 Score=35.14 Aligned_cols=58 Identities=17% Similarity=0.260 Sum_probs=44.1
Q ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeC--ChhHHHHHHHcCCCEEE
Q 017868 174 CRRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDV--DDYRLSVAKEIGADNIV 232 (365)
Q Consensus 174 ~~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~--~~~~~~~~~~~g~~~~~ 232 (365)
.+...+.++++|+...+|..|.+++. +++.+|.+.++.+.. ++.|.+.++.+|+.-+.
T Consensus 51 ~~~g~~~~g~~vv~aSsGN~g~alA~-~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~ 110 (290)
T TIGR01138 51 EKRGEIKPGDVLIEATSGNTGIALAM-IAALKGYRMKLLMPDNMSQERKAAMRAYGAELIL 110 (290)
T ss_pred HHcCCCCCCCEEEEECCChHHHHHHH-HHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEE
Confidence 34556677877666566999999999 999999987777754 35788889999987543
No 477
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=92.61 E-value=0.95 Score=38.96 Aligned_cols=81 Identities=28% Similarity=0.362 Sum_probs=44.8
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEE-eCChhHHHH-HHH---cCCCE-EEeCCCC-cccHHHHHHHHHHHhC
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIV-DVDDYRLSV-AKE---IGADN-IVKVSTN-LQDIAEEVEKIQKAMG 253 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v-~~~~~~~~~-~~~---~g~~~-~~~~~~~-~~~~~~~i~~~~~~~~ 253 (365)
+.++||+|+ |.+|..++..++ ..|++ ++.+ +++.++.+. ... .+... ++..+-. .+++...+..+.+. .
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~-~~g~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~ 81 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLA-KEGAK-VVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK-F 81 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-HCCCE-EEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-h
Confidence 468999987 999999998554 55985 5555 666655432 222 22211 2222211 12222333333222 2
Q ss_pred CCceEEEeCCCC
Q 017868 254 TGIDVSFDCAGL 265 (365)
Q Consensus 254 ~~~d~vid~~g~ 265 (365)
+++|++|.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (247)
T PRK05565 82 GKIDILVNNAGI 93 (247)
T ss_pred CCCCEEEECCCc
Confidence 479999998873
No 478
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=92.58 E-value=1 Score=38.41 Aligned_cols=102 Identities=12% Similarity=0.110 Sum_probs=60.4
Q ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH-cCCCE---------------EEeCCCCccc
Q 017868 177 ANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE-IGADN---------------IVKVSTNLQD 240 (365)
Q Consensus 177 ~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~-~g~~~---------------~~~~~~~~~~ 240 (365)
....++.+|||-|+|. |.-++- |+. .|+ .|++++-++...+.+.+ .+... +..+..+-.+
T Consensus 39 l~~~~~~rvLvPgCGk-g~D~~~-LA~-~G~-~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD~f~ 114 (226)
T PRK13256 39 LNINDSSVCLIPMCGC-SIDMLF-FLS-KGV-KVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYVADIFN 114 (226)
T ss_pred cCCCCCCeEEEeCCCC-hHHHHH-HHh-CCC-cEEEEecCHHHHHHHHHHcCCCcceecccccceeccCceEEEEccCcC
Confidence 3445678999999875 666666 654 599 59999999987776533 32221 1111111111
Q ss_pred HHHHHHHHHHHhCCCceEEEeCCC----C----HHHHHHHHHhcccCCEEEEEcc
Q 017868 241 IAEEVEKIQKAMGTGIDVSFDCAG----L----NKTMSTALGATCAGGKVCLVGM 287 (365)
Q Consensus 241 ~~~~i~~~~~~~~~~~d~vid~~g----~----~~~~~~~~~~l~~~G~~~~~g~ 287 (365)
+.. .....+.+|.|+|..- . .....++.+.|+++|+++.+..
T Consensus 115 l~~-----~~~~~~~fD~VyDra~~~Alpp~~R~~Y~~~l~~lL~pgg~llll~~ 164 (226)
T PRK13256 115 LPK-----IANNLPVFDIWYDRGAYIALPNDLRTNYAKMMLEVCSNNTQILLLVM 164 (226)
T ss_pred CCc-----cccccCCcCeeeeehhHhcCCHHHHHHHHHHHHHHhCCCcEEEEEEE
Confidence 100 0001247999999443 1 2344567788999999988754
No 479
>PRK07102 short chain dehydrogenase; Provisional
Probab=92.55 E-value=0.97 Score=38.97 Aligned_cols=37 Identities=32% Similarity=0.392 Sum_probs=28.4
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH
Q 017868 183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS 221 (365)
Q Consensus 183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~ 221 (365)
.+++|+|+ |++|..+++.++ ..|+ .|+++++++++.+
T Consensus 2 ~~vlItGas~giG~~~a~~l~-~~G~-~Vi~~~r~~~~~~ 39 (243)
T PRK07102 2 KKILIIGATSDIARACARRYA-AAGA-RLYLAARDVERLE 39 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHH-hcCC-EEEEEeCCHHHHH
Confidence 47899987 999999999555 5588 5777777776554
No 480
>PRK06123 short chain dehydrogenase; Provisional
Probab=92.54 E-value=1.5 Score=37.90 Aligned_cols=82 Identities=21% Similarity=0.224 Sum_probs=45.2
Q ss_pred CCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-H---HHHcCCCE-EEeCCC-CcccHHHHHHHHHHHhCC
Q 017868 182 ETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-V---AKEIGADN-IVKVST-NLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 182 g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~---~~~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~ 254 (365)
+.++||+|+ |.+|..+++.++ ..|+.+++...+++++.+ . +++.+... .+..+- +..++.+.+.++.+. .+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~-~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~ 79 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAA-ERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRE-LG 79 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHH-HCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHH-hC
Confidence 357899987 999999999555 558854443334443332 2 23334322 222221 223344444443332 35
Q ss_pred CceEEEeCCCC
Q 017868 255 GIDVSFDCAGL 265 (365)
Q Consensus 255 ~~d~vid~~g~ 265 (365)
++|++|.+.|.
T Consensus 80 ~id~li~~ag~ 90 (248)
T PRK06123 80 RLDALVNNAGI 90 (248)
T ss_pred CCCEEEECCCC
Confidence 78999998873
No 481
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=92.53 E-value=0.36 Score=40.63 Aligned_cols=82 Identities=22% Similarity=0.270 Sum_probs=53.2
Q ss_pred CEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH-HHHHHHcC-C---CEEEeCC-CCcccHHHHHHHHHHH-hCC
Q 017868 183 TNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR-LSVAKEIG-A---DNIVKVS-TNLQDIAEEVEKIQKA-MGT 254 (365)
Q Consensus 183 ~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~-~~~~~~~g-~---~~~~~~~-~~~~~~~~~i~~~~~~-~~~ 254 (365)
.+++|+|+ -++|+-.++.+.+..|..+++++.++.++ .+.++... . -+++.++ ..+++..+...+..+. ...
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~ 83 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD 83 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence 45999998 89999999889899999888888887777 33333322 1 1122111 2334444444444332 257
Q ss_pred CceEEEeCCC
Q 017868 255 GIDVSFDCAG 264 (365)
Q Consensus 255 ~~d~vid~~g 264 (365)
|.|+.+.++|
T Consensus 84 GlnlLinNaG 93 (249)
T KOG1611|consen 84 GLNLLINNAG 93 (249)
T ss_pred CceEEEeccc
Confidence 8999999887
No 482
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=92.49 E-value=2.8 Score=40.03 Aligned_cols=102 Identities=21% Similarity=0.298 Sum_probs=59.5
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHC-CCCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHH
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAF-GAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQ 249 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~-g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~ 249 (365)
...+++++++||=.|+|+ |..++. +++.. +...+++++.++++.+.+ +++|...+.....+..++. ..+
T Consensus 244 ~~l~~~~g~~VLDlgaG~-G~~t~~-la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~---~~~- 317 (444)
T PRK14902 244 PALDPKGGDTVLDACAAP-GGKTTH-IAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNIETKALDARKVH---EKF- 317 (444)
T ss_pred HHhCCCCCCEEEEeCCCC-CHHHHH-HHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCCccccc---chh-
Confidence 345678899888887533 333444 44443 234799999999876554 4567654322222221111 111
Q ss_pred HHhCCCceEEEe---CCCC-------------------------HHHHHHHHHhcccCCEEEEE
Q 017868 250 KAMGTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLV 285 (365)
Q Consensus 250 ~~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~~~~ 285 (365)
...+|.|+- |+|. ...+..+.+.|+++|+++..
T Consensus 318 ---~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvys 378 (444)
T PRK14902 318 ---AEKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKGGILVYS 378 (444)
T ss_pred ---cccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 256899864 3332 12456788899999998854
No 483
>PRK10901 16S rRNA methyltransferase B; Provisional
Probab=92.43 E-value=2.7 Score=39.88 Aligned_cols=103 Identities=19% Similarity=0.189 Sum_probs=59.8
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH----HHcCCCEEEeCCCCcccHHHHHHHHHH
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA----KEIGADNIVKVSTNLQDIAEEVEKIQK 250 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~i~~~~~ 250 (365)
....+++|++||=.|+|+ |..+.. +++..+...+++++.++++.+.+ +.+|....+. ..+..++. .+.
T Consensus 238 ~~l~~~~g~~VLDlgaG~-G~~t~~-la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~-~~D~~~~~----~~~- 309 (427)
T PRK10901 238 TLLAPQNGERVLDACAAP-GGKTAH-ILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVI-VGDARDPA----QWW- 309 (427)
T ss_pred HHcCCCCCCEEEEeCCCC-ChHHHH-HHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEE-EcCcccch----hhc-
Confidence 445678999988887643 334444 44444324799999999876554 4455532211 11111111 110
Q ss_pred HhCCCceEEEe---CCCC-------------------------HHHHHHHHHhcccCCEEEEEc
Q 017868 251 AMGTGIDVSFD---CAGL-------------------------NKTMSTALGATCAGGKVCLVG 286 (365)
Q Consensus 251 ~~~~~~d~vid---~~g~-------------------------~~~~~~~~~~l~~~G~~~~~g 286 (365)
....+|.|+- |.+. ...+..+.+.|++||+++...
T Consensus 310 -~~~~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpGG~lvyst 372 (427)
T PRK10901 310 -DGQPFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPGGTLLYAT 372 (427)
T ss_pred -ccCCCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 1356999873 3331 135667888999999988653
No 484
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=92.41 E-value=0.44 Score=42.29 Aligned_cols=113 Identities=20% Similarity=0.165 Sum_probs=65.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHH-HHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSV-AKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
..+.++||+|+|++|.+++. .+...|+..|.++.++.++.+. ++.++....+.+. .+. .+ .-..+|+
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~-aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~---~~~----~~----~~~~~Di 188 (278)
T PRK00258 121 LKGKRILILGAGGAARAVIL-PLLDLGVAEITIVNRTVERAEELAKLFGALGKAELD---LEL----QE----ELADFDL 188 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHH-HHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeec---ccc----hh----ccccCCE
Confidence 45678999999999999999 6667897688888888877654 4455422101110 011 01 1257999
Q ss_pred EEeCCCCHHHH-----HHHHHhcccCCEEEEEccCCCCccccchHhhhcCcE
Q 017868 259 SFDCAGLNKTM-----STALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD 305 (365)
Q Consensus 259 vid~~g~~~~~-----~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~ 305 (365)
||+|+.....- ......+.+...++.+-.. +..+......-.++..
T Consensus 189 vInaTp~g~~~~~~~~~~~~~~l~~~~~v~DivY~-P~~T~ll~~A~~~G~~ 239 (278)
T PRK00258 189 IINATSAGMSGELPLPPLPLSLLRPGTIVYDMIYG-PLPTPFLAWAKAQGAR 239 (278)
T ss_pred EEECCcCCCCCCCCCCCCCHHHcCCCCEEEEeecC-CCCCHHHHHHHHCcCe
Confidence 99998743210 1223456666666655432 2223333444444443
No 485
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=92.36 E-value=5.1 Score=34.06 Aligned_cols=108 Identities=18% Similarity=0.150 Sum_probs=67.7
Q ss_pred CCCCCEEEEEc-C--CHHHHHHHHHHHHHCCCCeEEEEeCCh--hH-HHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHh
Q 017868 179 IGPETNVLIMG-A--GPIGLVTMLGAPRAFGAPRIVIVDVDD--YR-LSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAM 252 (365)
Q Consensus 179 ~~~g~~vlI~G-~--g~~G~~ai~~l~~~~g~~~vi~v~~~~--~~-~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~ 252 (365)
.-.|++.||.| + -+++-..++ .++..|++..++...+. +| .+++++++.+.++..+-.++.-.+.+-+..+..
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk-~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~ 81 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAK-ALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK 81 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHH-HHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence 34689999997 3 568888888 77888997555543221 22 357788888776655433333223232222334
Q ss_pred CCCceEEEeCCCCH-----------------------------HHHHHHHHhcccCCEEEEEcc
Q 017868 253 GTGIDVSFDCAGLN-----------------------------KTMSTALGATCAGGKVCLVGM 287 (365)
Q Consensus 253 ~~~~d~vid~~g~~-----------------------------~~~~~~~~~l~~~G~~~~~g~ 287 (365)
.+++|.++.+++-. .....+...|+++|.++.+..
T Consensus 82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtY 145 (259)
T COG0623 82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTY 145 (259)
T ss_pred hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEe
Confidence 67899999877621 123345667889999988764
No 486
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=92.34 E-value=0.46 Score=42.26 Aligned_cols=46 Identities=24% Similarity=0.362 Sum_probs=36.5
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHc
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEI 226 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~ 226 (365)
..+.++||.|+|+.+.+++. .+...|++.+..+.++.+|.+.+ +.+
T Consensus 125 ~~~k~vlilGaGGaarAi~~-aL~~~g~~~i~i~nR~~~ka~~La~~~ 171 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAY-ALVTHGVQKLQVADLDTSRAQALADVI 171 (283)
T ss_pred cCCCeEEEECCcHHHHHHHH-HHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence 34789999999999999998 55678998888998888876544 444
No 487
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=92.31 E-value=1.7 Score=35.34 Aligned_cols=75 Identities=15% Similarity=0.173 Sum_probs=47.5
Q ss_pred CCCCEEEEEcCCH-HHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceE
Q 017868 180 GPETNVLIMGAGP-IGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 258 (365)
Q Consensus 180 ~~g~~vlI~G~g~-~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~ 258 (365)
-.|.+|||.|+|. +|..++. .++..|+ .+..+.++. +++.+.+ ..+|+
T Consensus 42 l~gk~vlViG~G~~~G~~~a~-~L~~~g~-~V~v~~r~~---------------------~~l~~~l--------~~aDi 90 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAA-LLLNRNA-TVTVCHSKT---------------------KNLKEHT--------KQADI 90 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHH-HHhhCCC-EEEEEECCc---------------------hhHHHHH--------hhCCE
Confidence 5789999999986 5998888 5566788 455555431 1111111 46899
Q ss_pred EEeCCCCHHHHHHHHHhcccCCEEEEEcc
Q 017868 259 SFDCAGLNKTMSTALGATCAGGKVCLVGM 287 (365)
Q Consensus 259 vid~~g~~~~~~~~~~~l~~~G~~~~~g~ 287 (365)
||.+++.+..+ ....+.++-.++.++.
T Consensus 91 VIsat~~~~ii--~~~~~~~~~viIDla~ 117 (168)
T cd01080 91 VIVAVGKPGLV--KGDMVKPGAVVIDVGI 117 (168)
T ss_pred EEEcCCCCcee--cHHHccCCeEEEEccC
Confidence 99999976422 2234555545555554
No 488
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=92.29 E-value=1.9 Score=38.96 Aligned_cols=90 Identities=22% Similarity=0.143 Sum_probs=60.7
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEE
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVS 259 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~v 259 (365)
..|++|.|.|.|.+|++.++ -++.+| ..+....+...+.+...++++.. .++.+. ....|++
T Consensus 160 ~~gK~vgilG~G~IG~~ia~-rL~~Fg-~~i~y~~r~~~~~~~~~~~~~~~--------~d~~~~--------~~~sD~i 221 (336)
T KOG0069|consen 160 LEGKTVGILGLGRIGKAIAK-RLKPFG-CVILYHSRTQLPPEEAYEYYAEF--------VDIEEL--------LANSDVI 221 (336)
T ss_pred ccCCEEEEecCcHHHHHHHH-hhhhcc-ceeeeecccCCchhhHHHhcccc--------cCHHHH--------HhhCCEE
Confidence 36889999999999999999 667789 56777767666677666666652 232222 2456666
Q ss_pred Ee-CCCCHHHHH----HHHHhcccCCEEEEEcc
Q 017868 260 FD-CAGLNKTMS----TALGATCAGGKVCLVGM 287 (365)
Q Consensus 260 id-~~g~~~~~~----~~~~~l~~~G~~~~~g~ 287 (365)
+- |..++.+.+ ..+..|++++.++..+.
T Consensus 222 vv~~pLt~~T~~liNk~~~~~mk~g~vlVN~aR 254 (336)
T KOG0069|consen 222 VVNCPLTKETRHLINKKFIEKMKDGAVLVNTAR 254 (336)
T ss_pred EEecCCCHHHHHHhhHHHHHhcCCCeEEEeccc
Confidence 55 444443322 46778888888887754
No 489
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=92.27 E-value=1.1 Score=38.73 Aligned_cols=79 Identities=19% Similarity=0.282 Sum_probs=45.2
Q ss_pred EEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHH---HcCCCE-EEeCCC-CcccHHHHHHHHHHHhCCCc
Q 017868 184 NVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAK---EIGADN-IVKVST-NLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 184 ~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~---~~g~~~-~~~~~~-~~~~~~~~i~~~~~~~~~~~ 256 (365)
++||+|+ |.+|..+++.+ ...|+ .++.+.+++++.+ ..+ ..+... .+..+- +.++..+.+..+.+. .+++
T Consensus 2 ~~lItG~sg~iG~~la~~l-~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~~~i 78 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERL-AKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEK-FGGF 78 (254)
T ss_pred EEEEeCCCchHHHHHHHHH-HHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cCCC
Confidence 6899987 99999999945 46698 5677766655432 222 233221 222222 222333333333332 3478
Q ss_pred eEEEeCCCC
Q 017868 257 DVSFDCAGL 265 (365)
Q Consensus 257 d~vid~~g~ 265 (365)
|++|.+.|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999998873
No 490
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=92.25 E-value=0.85 Score=42.70 Aligned_cols=39 Identities=26% Similarity=0.315 Sum_probs=29.1
Q ss_pred CCCCCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChh
Q 017868 178 NIGPETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDY 218 (365)
Q Consensus 178 ~~~~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~ 218 (365)
+-..+.+|||+|+ |.+|..++..| ...|. .|+++.++..
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~L-l~~G~-~V~~l~R~~~ 95 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVREL-VRRGY-NVVAVAREKS 95 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHH-HHCCC-EEEEEEechh
Confidence 3456789999987 99999999944 45688 4666666654
No 491
>PRK06046 alanine dehydrogenase; Validated
Probab=92.22 E-value=3.3 Score=37.70 Aligned_cols=95 Identities=18% Similarity=0.232 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHc----CCCEEEeCCCCcccHHHHHHHHHHHhCC
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEI----GADNIVKVSTNLQDIAEEVEKIQKAMGT 254 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~----g~~~~~~~~~~~~~~~~~i~~~~~~~~~ 254 (365)
..-.++.|.|+|..|...+..++...+++.+.+.+++.++.+ +++++ +..... + .++. +.. .
T Consensus 127 ~~~~~vgiiG~G~qa~~h~~al~~~~~i~~v~v~~r~~~~~~~~~~~~~~~~~~~v~~-~----~~~~----~~l----~ 193 (326)
T PRK06046 127 KDSKVVGIIGAGNQARTQLLALSEVFDLEEVRVYDRTKSSAEKFVERMSSVVGCDVTV-A----EDIE----EAC----D 193 (326)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCceEEEEECCCHHHHHHHHHHHHhhcCceEEE-e----CCHH----HHh----h
Confidence 345688899999999988886666778888888888887765 34444 322111 1 1222 221 2
Q ss_pred CceEEEeCCCCHHHHHHHHHhcccCCEEEEEccCC
Q 017868 255 GIDVSFDCAGLNKTMSTALGATCAGGKVCLVGMGH 289 (365)
Q Consensus 255 ~~d~vid~~g~~~~~~~~~~~l~~~G~~~~~g~~~ 289 (365)
.|+|+.|+.+...+ ...+.++++-++..+|...
T Consensus 194 -aDiVv~aTps~~P~-~~~~~l~~g~hV~~iGs~~ 226 (326)
T PRK06046 194 -CDILVTTTPSRKPV-VKAEWIKEGTHINAIGADA 226 (326)
T ss_pred -CCEEEEecCCCCcE-ecHHHcCCCCEEEecCCCC
Confidence 89999988754221 2335678888888888543
No 492
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=92.21 E-value=0.59 Score=47.02 Aligned_cols=77 Identities=23% Similarity=0.323 Sum_probs=48.1
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChh---------------------HHHHHHHcCCCEEEeCCCCc
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDY---------------------RLSVAKEIGADNIVKVSTNL 238 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~---------------------~~~~~~~~g~~~~~~~~~~~ 238 (365)
..+.+|+|+|+|+.|+.++. .+...|++ |++++..+. ..+.++++|+....+.. -.
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~-~L~~~G~~-V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~-v~ 401 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACAD-VLARNGVA-VTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCE-VG 401 (654)
T ss_pred cCCCEEEEECCCHHHHHHHH-HHHHCCCe-EEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCE-eC
Confidence 36889999999999999999 66677995 666665432 34556777764322210 00
Q ss_pred ccHHHHHHHHHHHhCCCceEEEeCCCC
Q 017868 239 QDIAEEVEKIQKAMGTGIDVSFDCAGL 265 (365)
Q Consensus 239 ~~~~~~i~~~~~~~~~~~d~vid~~g~ 265 (365)
.+. .+.+. ...+|.||.++|.
T Consensus 402 ~~i--~~~~~----~~~~DavilAtGa 422 (654)
T PRK12769 402 KDI--SLESL----LEDYDAVFVGVGT 422 (654)
T ss_pred CcC--CHHHH----HhcCCEEEEeCCC
Confidence 111 11111 2468999998885
No 493
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=92.20 E-value=0.94 Score=40.03 Aligned_cols=112 Identities=17% Similarity=0.165 Sum_probs=62.3
Q ss_pred CCCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHH-HHHHcCCCE-EEeCCCCcccHHHHHHHHHHHhCCCc
Q 017868 179 IGPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLS-VAKEIGADN-IVKVSTNLQDIAEEVEKIQKAMGTGI 256 (365)
Q Consensus 179 ~~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~-~~~~~g~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~ 256 (365)
...+.+++|.|+|++|.+++. .+...|+ .+.++++++++.+ +++.+.... .... ++.+ . ....+
T Consensus 114 ~~~~k~vliiGaGg~g~aia~-~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~-----~~~~----~---~~~~~ 179 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVAL-PLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAF-----SMDE----L---PLHRV 179 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHH-HHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEe-----chhh----h---cccCc
Confidence 345788999999999999998 4456687 6777778777654 444443211 1111 1111 0 12468
Q ss_pred eEEEeCCCCHHH--H---HHHHHhcccCCEEEEEccCCCCccccchHhhhcCcE
Q 017868 257 DVSFDCAGLNKT--M---STALGATCAGGKVCLVGMGHHEMTVPLTPAAVREVD 305 (365)
Q Consensus 257 d~vid~~g~~~~--~---~~~~~~l~~~G~~~~~g~~~~~~~~~~~~~~~~~~~ 305 (365)
|+||+|++.... . ......+.++..++.+...... +......-.++..
T Consensus 180 DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~p~~-T~ll~~A~~~G~~ 232 (270)
T TIGR00507 180 DLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYNPGE-TPFLAEAKSLGTK 232 (270)
T ss_pred cEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccCCCC-CHHHHHHHHCCCe
Confidence 999999875311 0 1123456666666666443332 2233333444443
No 494
>PRK08278 short chain dehydrogenase; Provisional
Probab=92.19 E-value=1.8 Score=38.20 Aligned_cols=82 Identities=26% Similarity=0.287 Sum_probs=45.9
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhH--------HHH---HHHcCCCE-EEeCC-CCcccHHHHHH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYR--------LSV---AKEIGADN-IVKVS-TNLQDIAEEVE 246 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~--------~~~---~~~~g~~~-~~~~~-~~~~~~~~~i~ 246 (365)
.+.++||+|+ +++|..++..++ ..|+ .++.++++.++ .+. ++..+... .+..+ .+.++..+.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~-~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 82 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAA-RDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA 82 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-HCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence 4578999987 999999999554 5598 46666655431 112 22333322 12111 12233333334
Q ss_pred HHHHHhCCCceEEEeCCCC
Q 017868 247 KIQKAMGTGIDVSFDCAGL 265 (365)
Q Consensus 247 ~~~~~~~~~~d~vid~~g~ 265 (365)
+..+. -+.+|++|.++|.
T Consensus 83 ~~~~~-~g~id~li~~ag~ 100 (273)
T PRK08278 83 KAVER-FGGIDICVNNASA 100 (273)
T ss_pred HHHHH-hCCCCEEEECCCC
Confidence 33332 2479999998873
No 495
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=92.15 E-value=0.61 Score=37.59 Aligned_cols=43 Identities=26% Similarity=0.318 Sum_probs=33.3
Q ss_pred CCCEEEEEcC-CHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHH
Q 017868 181 PETNVLIMGA-GPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKE 225 (365)
Q Consensus 181 ~g~~vlI~G~-g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~ 225 (365)
.|..||++|+ .++|...++ .+...|+ .|+++.+.++....+-+
T Consensus 6 aG~~vlvTgagaGIG~~~v~-~La~aGA-~ViAvaR~~a~L~sLV~ 49 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVL-SLAKAGA-QVIAVARNEANLLSLVK 49 (245)
T ss_pred cceEEEeecccccccHHHHH-HHHhcCC-EEEEEecCHHHHHHHHh
Confidence 5778899987 689999999 4456699 68888888887765433
No 496
>PRK13243 glyoxylate reductase; Reviewed
Probab=92.13 E-value=1.5 Score=40.03 Aligned_cols=88 Identities=20% Similarity=0.201 Sum_probs=55.0
Q ss_pred CCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEE
Q 017868 181 PETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 260 (365)
Q Consensus 181 ~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vi 260 (365)
.|.+|.|+|.|.+|..+++ .++.+|+ .|++.+++.+.. ....++... .++.+.+ ...|+|+
T Consensus 149 ~gktvgIiG~G~IG~~vA~-~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~--------~~l~ell--------~~aDiV~ 209 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVAR-RAKGFGM-RILYYSRTRKPE-AEKELGAEY--------RPLEELL--------RESDFVS 209 (333)
T ss_pred CCCEEEEECcCHHHHHHHH-HHHHCCC-EEEEECCCCChh-hHHHcCCEe--------cCHHHHH--------hhCCEEE
Confidence 5789999999999999999 7789999 577887765432 233444321 1222221 2467777
Q ss_pred eCCCCHHHH-----HHHHHhcccCCEEEEEcc
Q 017868 261 DCAGLNKTM-----STALGATCAGGKVCLVGM 287 (365)
Q Consensus 261 d~~g~~~~~-----~~~~~~l~~~G~~~~~g~ 287 (365)
-+....... ...+..++++..++.++.
T Consensus 210 l~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aR 241 (333)
T PRK13243 210 LHVPLTKETYHMINEERLKLMKPTAILVNTAR 241 (333)
T ss_pred EeCCCChHHhhccCHHHHhcCCCCeEEEECcC
Confidence 766532211 245667777776666653
No 497
>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed
Probab=92.10 E-value=2.6 Score=36.10 Aligned_cols=103 Identities=17% Similarity=0.295 Sum_probs=63.0
Q ss_pred HhcCCCCCCEEEEEcCCHHHHHHHHHHHHHCC-CCeEEEEeCChhHHHHHHHcCC----CE-EEeCCCCcccHHHHHHHH
Q 017868 175 RRANIGPETNVLIMGAGPIGLVTMLGAPRAFG-APRIVIVDVDDYRLSVAKEIGA----DN-IVKVSTNLQDIAEEVEKI 248 (365)
Q Consensus 175 ~~~~~~~g~~vlI~G~g~~G~~ai~~l~~~~g-~~~vi~v~~~~~~~~~~~~~g~----~~-~~~~~~~~~~~~~~i~~~ 248 (365)
+.....++.+||-.|+|. |..+.. +++..+ ...+++++.++...+.+++.-. .. +.....+..+..
T Consensus 45 ~~~~~~~~~~vldiG~G~-G~~~~~-l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------ 116 (239)
T PRK00216 45 KWLGVRPGDKVLDLACGT-GDLAIA-LAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGDAEALP------ 116 (239)
T ss_pred HHhCCCCCCeEEEeCCCC-CHHHHH-HHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEecccccCC------
Confidence 444566788999999866 777777 666654 3479999998887777655321 11 111111111110
Q ss_pred HHHhCCCceEEEeCCC------CHHHHHHHHHhcccCCEEEEEcc
Q 017868 249 QKAMGTGIDVSFDCAG------LNKTMSTALGATCAGGKVCLVGM 287 (365)
Q Consensus 249 ~~~~~~~~d~vid~~g------~~~~~~~~~~~l~~~G~~~~~g~ 287 (365)
.....+|+|+.... ....+..+.+.|+++|.++....
T Consensus 117 --~~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~ 159 (239)
T PRK00216 117 --FPDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPGGRLVILEF 159 (239)
T ss_pred --CCCCCccEEEEecccccCCCHHHHHHHHHHhccCCcEEEEEEe
Confidence 01356898875321 23466788889999999987754
No 498
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=92.09 E-value=0.57 Score=39.33 Aligned_cols=48 Identities=21% Similarity=0.324 Sum_probs=37.3
Q ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHH-HHcCCC
Q 017868 180 GPETNVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVA-KEIGAD 229 (365)
Q Consensus 180 ~~g~~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~-~~~g~~ 229 (365)
-.|.+++|.|.|.+|..+++ .+...|+ .|++.+.++++.+.+ +.+++.
T Consensus 26 l~gk~v~I~G~G~vG~~~A~-~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~ 74 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAE-HLLEEGA-KLIVADINEEAVARAAELFGAT 74 (200)
T ss_pred CCCCEEEEECCCHHHHHHHH-HHHHCCC-EEEEEcCCHHHHHHHHHHcCCE
Confidence 36789999999999999999 6677899 567888888776554 445643
No 499
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=92.08 E-value=0.6 Score=40.18 Aligned_cols=32 Identities=34% Similarity=0.561 Sum_probs=26.8
Q ss_pred EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCC
Q 017868 184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVD 216 (365)
Q Consensus 184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~ 216 (365)
+|||.|+|++|..++. .+...|..++..+|.+
T Consensus 1 kVlvvG~GGlG~eilk-~La~~Gvg~i~ivD~D 32 (234)
T cd01484 1 KVLLVGAGGIGCELLK-NLALMGFGQIHVIDMD 32 (234)
T ss_pred CEEEECCCHHHHHHHH-HHHHcCCCeEEEEeCC
Confidence 5899999999999999 5556799988888655
No 500
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=92.08 E-value=2.9 Score=33.71 Aligned_cols=87 Identities=17% Similarity=0.226 Sum_probs=53.6
Q ss_pred EEEEEcCCHHHHHHHHHHHHHCCCCeEEEEeCChhHHHHHHHcCCCEEEeCCCCcccHHHHHHHHHHHhCCCceEEEeCC
Q 017868 184 NVLIMGAGPIGLVTMLGAPRAFGAPRIVIVDVDDYRLSVAKEIGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 263 (365)
Q Consensus 184 ~vlI~G~g~~G~~ai~~l~~~~g~~~vi~v~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~~~~d~vid~~ 263 (365)
+|-++|.|.+|..++..| ...|+ .+.+.++++++.+.+.+.|+... .+..+.. ...|+||-|+
T Consensus 3 ~Ig~IGlG~mG~~~a~~L-~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-------~s~~e~~--------~~~dvvi~~v 65 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNL-AKAGY-EVTVYDRSPEKAEALAEAGAEVA-------DSPAEAA--------EQADVVILCV 65 (163)
T ss_dssp EEEEE--SHHHHHHHHHH-HHTTT-EEEEEESSHHHHHHHHHTTEEEE-------SSHHHHH--------HHBSEEEE-S
T ss_pred EEEEEchHHHHHHHHHHH-HhcCC-eEEeeccchhhhhhhHHhhhhhh-------hhhhhHh--------hcccceEeec
Confidence 688899999999999845 45688 57888999999888877774332 1222222 2458999988
Q ss_pred CCHHHHHHH------HHhcccCCEEEEEcc
Q 017868 264 GLNKTMSTA------LGATCAGGKVCLVGM 287 (365)
Q Consensus 264 g~~~~~~~~------~~~l~~~G~~~~~g~ 287 (365)
......... +..+.++..++.++.
T Consensus 66 ~~~~~v~~v~~~~~i~~~l~~g~iiid~sT 95 (163)
T PF03446_consen 66 PDDDAVEAVLFGENILAGLRPGKIIIDMST 95 (163)
T ss_dssp SSHHHHHHHHHCTTHGGGS-TTEEEEE-SS
T ss_pred ccchhhhhhhhhhHHhhccccceEEEecCC
Confidence 875544443 333445555555543
Done!