Query 017872
Match_columns 365
No_of_seqs 190 out of 1537
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 06:17:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017872.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017872hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3daa_A D-amino acid aminotrans 100.0 8.2E-54 2.8E-58 410.1 27.5 270 6-356 2-276 (277)
2 3u0g_A Putative branched-chain 100.0 1.2E-52 4.2E-57 411.1 29.5 275 5-359 29-317 (328)
3 1iye_A Branched-chain amino ac 100.0 1.1E-51 3.8E-56 399.9 28.1 274 5-358 7-295 (309)
4 2eiy_A ILVE, branched-chain am 100.0 9.3E-51 3.2E-55 393.5 31.5 275 5-359 6-294 (308)
5 3sno_A Hypothetical aminotrans 100.0 1E-50 3.4E-55 395.5 26.5 265 5-356 15-314 (315)
6 2xpf_A 4-amino-4-deoxychorisma 100.0 5.5E-50 1.9E-54 386.1 30.3 260 5-356 22-290 (292)
7 1i2k_A 4-amino-4-deoxychorisma 100.0 7.6E-50 2.6E-54 380.0 30.8 256 7-353 2-266 (269)
8 4dqn_A Putative branched-chain 100.0 6.5E-50 2.2E-54 394.1 27.4 282 8-359 34-332 (345)
9 3lul_A 4-amino-4-deoxychorisma 100.0 2.1E-49 7.2E-54 378.5 28.8 259 1-358 2-269 (272)
10 3dth_A Branched-chain amino ac 100.0 1.1E-47 3.6E-52 381.5 29.8 287 6-359 52-360 (372)
11 3dtg_A Branched-chain amino ac 100.0 1.3E-47 4.4E-52 381.2 26.9 284 7-359 53-360 (372)
12 2a1h_A Branched chain aminotra 100.0 3.1E-47 1.1E-51 377.6 27.8 284 6-359 46-356 (365)
13 3csw_A BCAT, putative branched 100.0 1.4E-47 4.7E-52 368.2 23.9 253 8-358 18-277 (285)
14 3uzo_A Branched-chain-amino-ac 100.0 1.9E-47 6.6E-52 378.2 24.3 282 8-359 49-347 (358)
15 2coi_A Branched chain aminotra 100.0 1.9E-46 6.5E-51 374.4 29.3 283 6-358 66-375 (386)
16 2zgi_A Putative 4-amino-4-deox 100.0 1.5E-43 5.3E-48 332.9 20.3 220 7-315 2-230 (246)
17 3qqm_A MLR3007 protein; struct 100.0 6.7E-40 2.3E-44 304.1 24.6 200 28-312 14-220 (221)
18 3ceb_A D-aminoacid aminotransf 100.0 1.5E-36 5.1E-41 275.4 18.1 189 28-307 3-194 (194)
19 3mcb_B Transcription factor BT 53.2 13 0.00043 26.8 3.4 28 204-232 5-41 (58)
20 3lkx_A Transcription factor BT 48.1 15 0.00052 27.1 3.3 28 204-232 5-41 (66)
21 4h5g_A Amino acid ABC superfam 22.2 74 0.0025 27.3 4.0 35 260-294 34-68 (243)
No 1
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A*
Probab=100.00 E-value=8.2e-54 Score=410.06 Aligned_cols=270 Identities=16% Similarity=0.178 Sum_probs=224.1
Q ss_pred EEEECCeeecCCCCCcccccccC---CCeEEEEEEEEcCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCC
Q 017872 6 IVFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTHNNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLEPI 82 (365)
Q Consensus 6 ~~~~nG~~~~~~~~~~is~~~~~---G~GvFEt~r~~~g~~~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~~~ 82 (365)
++|+||+++ +.+++.++++|++ |||+|||||+++| ++|+|++|++||.+||+.|+|+.|
T Consensus 2 ~~~~nG~~~-~~~~~~i~~~d~g~~yGdgvFEtir~~~g--~~f~l~~Hl~RL~~Sa~~l~i~~~--------------- 63 (277)
T 3daa_A 2 YTLWNDQIV-KDEEVKIDKEDRGYQFGDGVYEVVKVYNG--EMFTVNEHIDRLYASAEKIRITIP--------------- 63 (277)
T ss_dssp EEEETTEEE-EGGGCCBCTTBHHHHTCCEEEEEEEEETT--EETTHHHHHHHHHHHHHHTTCCCS---------------
T ss_pred EEEECCEEe-EhHHCeechhhhHHhcccEEEEEEEEECC--EEcCHHHHHHHHHHHHHhcCCCCC---------------
Confidence 789999999 8888999999884 9999999999999 899999999999999999999855
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhhhhhhhhhhhcCCCcceEEEEEEEecCCC-CCCccCCCCCCCCcceeEEEEeecCC
Q 017872 83 RTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYGK-LSGIENMGSDDFLGVFDVSVHFSGYV 161 (365)
Q Consensus 83 ~~~~~~~~~~~~~~~l~~li~~~~~~~l~~~l~~~~~~~~~~iri~vt~g~~~-~~~~~~~g~~~~~~~~~~~v~~~~~~ 161 (365)
++.+.+.+.+.+++. .++..+++||+++++|.+. ++.+ +.....|+++|.+.|++
T Consensus 64 ------~~~~~l~~~i~~li~-------------~n~~~~~~lri~vtrG~~~r~~~~-----p~~~~~~~~~i~~~p~~ 119 (277)
T 3daa_A 64 ------YTKDKFHQLLHELVE-------------KNELNTGHIYFQVTRGTSPRAHQF-----PENTVKPVIIGYTKENP 119 (277)
T ss_dssp ------SCHHHHHHHHHHHHH-------------HHTCCSEEEEEEEESCBCSCCSSC-----CSSCCCCEEEEEEEECC
T ss_pred ------CCHHHHHHHHHHHHH-------------hcCCCcEEEEEEEEecCCCcCCCC-----CCCCCCcEEEEEEEECC
Confidence 234444455555442 3445689999999998642 2221 10245688999999987
Q ss_pred CccccccCCCcEEEEeccccc-CCcccccchhhcHHHHHHhCCCCCcEEEEeCCCCeEEecCcceEEEEEcCCCCcchhh
Q 017872 162 PFVFGVEGTGARLALVGRGRD-VAEAKYSDWVRLRKPLEKLRPPSVTELLLSNDGDQLLEGSITNFFVVCRKDNSEAEDK 240 (365)
Q Consensus 162 ~~~~~~~~~Gv~l~~~~~~r~-~~~~K~~~~~~~~~~l~~a~~~g~de~lL~~~gg~v~Egs~sN~F~v~~~~~~~~~~~ 240 (365)
++ ...+.+|+++.+++..|. .+.+|+.||........+|+++|+||+|+.++| +|+||+++|||++++++
T Consensus 120 ~~-~~~~~~gv~~~~~~~~r~~~~~~Kt~nyl~~~la~~eA~~~g~~e~l~l~~g-~v~E~~~sNif~~~~~~------- 190 (277)
T 3daa_A 120 RP-LENLEKGVKATFVEDIRWLRCDIKSLNLLGAVLAKQEAHEKGCYEAILHRNN-TVTEGSSSNVFGIKDGI------- 190 (277)
T ss_dssp CC-HHHHHHCEEEEEEECCCCSCTTSCBSCCHHHHHHHHHHHHTTCSEEEEEETT-EEEEETTBEEEEEETTE-------
T ss_pred CC-hHHHhCCeEEEEecCccccCCCcchhhhHHHHHHHHHHHHCCCCEEEEEcCC-EEEEcCceEEEEEECCE-------
Confidence 53 234567999998876553 468999888655445556888999999765677 99999999999999987
Q ss_pred hhhccCCCCceEEEecCCCCCccccHHHHHHHHHHHhCCCCEEEEecCHHHHhhhceeeeeecccceEEEEEEcCCcccc
Q 017872 241 FLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSSLRVLQHVESIQVPKTWE 320 (365)
Q Consensus 241 ~~~~~~~~~~~~l~TPpl~~giLpGItR~~vle~a~~~gi~v~E~~i~~~eL~~adEvFltnS~~gi~PV~~i~~~~~~~ 320 (365)
|+|||+++++||||||+.||++|+++|++|+|+.++++||..|||+|+|||++||+||++||+
T Consensus 191 ------------l~TP~~~~~iL~GitR~~vl~~~~~~g~~v~e~~i~~~el~~adevf~~ns~~~i~pV~~id~----- 253 (277)
T 3daa_A 191 ------------LYTHPANNMILKGITRDVVIACANEINMPVKEIPFTTHEALKMDELFVTSTTSEITPVIEIDG----- 253 (277)
T ss_dssp ------------EEECCSSTTSCCCHHHHHHHHHHHHTTCCEECCCCBHHHHHTCSEEEEEETTTEEEEEEEETT-----
T ss_pred ------------EECCCCcCCCCccHHHHHHHHHHHHcCCeEEEEeCCHHHHHhcCeeeeecChhhEEEEEEECC-----
Confidence 999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccccccccccccccccCCCccHHHHHHHHHHHHHH
Q 017872 321 LQESDCWNDIAWEQKLFEGGPGMITKTIQEEIMERA 356 (365)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~G~vt~~L~~~~~~~~ 356 (365)
..+.+|.+||+|++|+++|.+.+
T Consensus 254 -------------~~~~~g~~g~~t~~L~~~~~~~i 276 (277)
T 3daa_A 254 -------------KLIRDGKVGEWTRKLQKQFETKI 276 (277)
T ss_dssp -------------EESTTSSCCHHHHHHHHHHHTTC
T ss_pred -------------EECCCCCcCHHHHHHHHHHHHhc
Confidence 24556789999999999998653
No 2
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei}
Probab=100.00 E-value=1.2e-52 Score=411.05 Aligned_cols=275 Identities=20% Similarity=0.252 Sum_probs=226.9
Q ss_pred eEEEECCeeecCCCCCcccccccC---CCeEEEEEEEEc---CcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCC
Q 017872 5 RIVFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTHN---NGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSG 78 (365)
Q Consensus 5 ~~~~~nG~~~~~~~~~~is~~~~~---G~GvFEt~r~~~---g~~~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~ 78 (365)
.++|+||+++ +.+++.++++|++ |||+|||||+|+ |+.++|+|++|++||.+||+.|+|+.|
T Consensus 29 ~~~w~nG~~v-p~~~~~i~~~drg~~yGdgvFEtir~~~~~dG~~~~f~l~~Hl~RL~~Sa~~l~i~~p----------- 96 (328)
T 3u0g_A 29 GKIWMDGKLI-EWRDAKIHVLTHTLHYGMGVFEGVRAYKTADGGTAIFRLKEHTKRLLNSAKIFQMDVP----------- 96 (328)
T ss_dssp SEEEETTEEE-EGGGCEEESSCHHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCCS-----------
T ss_pred CEEEECCEEe-ehHhCccCccchHHhcCceEEEEEEEEECCCCCeeeCCHHHHHHHHHHHHHHHCCCCC-----------
Confidence 4899999999 8888999999885 999999999998 644799999999999999999999765
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhhhhhcCCCcceEEEEEEEecCCCCCCccCCCCCCCCcceeEEEEee
Q 017872 79 LEPIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVHFS 158 (365)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~li~~~~~~~l~~~l~~~~~~~~~~iri~vt~g~~~~~~~~~~g~~~~~~~~~~~v~~~ 158 (365)
++.+.+.+.+.+++. .++..+++||+++++|.+. +|..+....+.++|.+.
T Consensus 97 ----------~~~~~l~~~i~~lv~-------------~n~~~~~~iR~~vtrg~~~------~g~~p~~~~~~~~i~~~ 147 (328)
T 3u0g_A 97 ----------FDQETLEAAQRDVVR-------------ENKLESCYLRPIIWIGSEK------LGVSAKGNTIHVAIAAW 147 (328)
T ss_dssp ----------SCHHHHHHHHHHHHH-------------HTTCSSEEEEEEEEECSSC------CSTTCCCCCEEEEEEEE
T ss_pred ----------CCHHHHHHHHHHHHH-------------hcCCCCeEEEEEEEecCCC------CCcCCCCCCcEEEEEEE
Confidence 234444454554442 4556789999999998753 23333334578888888
Q ss_pred cCCCcc-ccccCCCcEEEEeccccc-----CCccc-ccchhhcHHHHHHhCCCCCcEEEEe-CCCCeEEecCcceEEEEE
Q 017872 159 GYVPFV-FGVEGTGARLALVGRGRD-----VAEAK-YSDWVRLRKPLEKLRPPSVTELLLS-NDGDQLLEGSITNFFVVC 230 (365)
Q Consensus 159 ~~~~~~-~~~~~~Gv~l~~~~~~r~-----~~~~K-~~~~~~~~~~l~~a~~~g~de~lL~-~~gg~v~Egs~sN~F~v~ 230 (365)
|+++++ ...+.+|+++.++++.|. .+.+| +.||........+|+++|+||+|+. .+| +|+|++++|||+++
T Consensus 148 p~~~~~~~~~~~~gv~l~~~~~~R~~~~~~~~~~K~t~nyl~~vla~~eA~~~G~~e~l~ld~~g-~v~E~~~sNif~v~ 226 (328)
T 3u0g_A 148 PWGAYLGEEGLAKGIRVKTSSFTRHHVNVSMVRAKASGWYVNSILANQEATADGYDEALLLDVDG-YVSEGSGENFFLVN 226 (328)
T ss_dssp ECC----HHHHHHCEEEEECSSCCCCTTTSCTTSCBGGGHHHHHHHHHHHHHTTCSEEEEECTTS-CEEEESSSEEEEEE
T ss_pred EcCCCCChhhhcCCEEEEEeeeeecCCCCcccchhhhhhhHHHHHHHHHHHHCCCCEEEEECCCC-cEEEcCceeEEEEE
Confidence 887643 223457999999988886 34688 6787655455557889999999755 467 99999999999999
Q ss_pred cCCCCcchhhhhhccCCCCceEEEecCCCCCccccHHHHHHHHHHHhCCCCEEEEecCHHHHhhhceeeeeecccceEEE
Q 017872 231 RKDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSSLRVLQHV 310 (365)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giLpGItR~~vle~a~~~gi~v~E~~i~~~eL~~adEvFltnS~~gi~PV 310 (365)
+++ |+|||++. +||||||+.||++|+++|++|+|+.++++||..|||+|+|||++||+||
T Consensus 227 ~g~-------------------l~TP~~~~-iL~GitR~~vl~~a~~~g~~v~e~~i~~~eL~~adevf~tns~~~v~PV 286 (328)
T 3u0g_A 227 RGK-------------------LYTPDLAS-CLDGITRDTVITLAKEAGIEVIEKRITRDEVYTADEAFFTGTAAEVTPI 286 (328)
T ss_dssp TTE-------------------EEECCSSS-SCCCHHHHHHHHHHHHTTCCEEECCCCHHHHHTCSEEEEEETTTEEEEE
T ss_pred CCE-------------------EEeCCccc-cchHHHHHHHHHHHHHcCCeEEEEeCCHHHHhhCCEEEEEcchhhEEEE
Confidence 987 99999988 9999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCcccccccccccccccccccccCCCccHHHHHHHHHHHHHHhcc
Q 017872 311 ESIQVPKTWELQESDCWNDIAWEQKLFEGGPGMITKTIQEEIMERAGLG 359 (365)
Q Consensus 311 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~vt~~L~~~~~~~~~~~ 359 (365)
++||+ ..+++|.+||+|++|+++|.+++...
T Consensus 287 ~~Id~------------------~~~~~g~~g~vt~~L~~~~~~~~~g~ 317 (328)
T 3u0g_A 287 RELDN------------------RTIGGGARGPITEKLQSAFFDVVNGK 317 (328)
T ss_dssp EEETT------------------EECTTSSCCHHHHHHHHHHHHHHTTC
T ss_pred EEECC------------------EECCCCCCCHHHHHHHHHHHHHHcCC
Confidence 99998 24567789999999999999998654
No 3
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A*
Probab=100.00 E-value=1.1e-51 Score=399.95 Aligned_cols=274 Identities=19% Similarity=0.215 Sum_probs=223.1
Q ss_pred eEEEECCeeecCCCCCcccccccC---CCeEEEEEEEE---cCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCC
Q 017872 5 RIVFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTH---NNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSG 78 (365)
Q Consensus 5 ~~~~~nG~~~~~~~~~~is~~~~~---G~GvFEt~r~~---~g~~~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~ 78 (365)
.++|+||+++ +.+++.++++|++ |||+|||||++ +|+ ++|+|++|++||.+||+.|+|+.|
T Consensus 7 ~~~~~ng~~~-~~~~~~i~~~d~g~~yG~gvFEtir~~~~~~G~-~~~~l~~Hl~RL~~Sa~~l~~~~~----------- 73 (309)
T 1iye_A 7 DYIWFNGEMV-RWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGP-VVFRHREHMQRLHDSAKIYRFPVS----------- 73 (309)
T ss_dssp SEEEETTEEE-EGGGCCCCTTCHHHHHCCEEECCEEEECCTTSS-EEETHHHHHHHHHHHHHHHTCCCC-----------
T ss_pred CeEEECCEEE-EhHHcccCccchHHhccceeEEEEEEEECCCCc-EEcCHHHHHHHHHHHHHHhCCCCC-----------
Confidence 3899999999 8888999998874 99999999999 653 699999999999999999999755
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhhhhhcCCCcceEEEEEEEecCCCCCCccCCCCCCC-CcceeEEEEe
Q 017872 79 LEPIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDDF-LGVFDVSVHF 157 (365)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~l~~li~~~~~~~l~~~l~~~~~~~~~~iri~vt~g~~~~~~~~~~g~~~~-~~~~~~~v~~ 157 (365)
++.+.+.+.+.+++. .++..+++||+++++|.+. +|..+. ...++++|.+
T Consensus 74 ----------~~~~~l~~~i~~~~~-------------~~~~~~~~iR~~v~~g~~~------~g~~p~~~~~~~~~i~~ 124 (309)
T 1iye_A 74 ----------QSIDELMEACRDVIR-------------KNNLTSAYIRPLIFVGDVG------MGVNPPAGYSTDVIIAA 124 (309)
T ss_dssp ----------SCHHHHHHHHHHHHH-------------HTTCSSEEEEEEEEECSSC------SSSSCCTTCCEEEEEEE
T ss_pred ----------CCHHHHHHHHHHHHH-------------hcCCCCEEEEEEEEeCCCc------cCCCCCCCCCcEEEEEE
Confidence 233444444444442 3445689999999998643 233222 2467888888
Q ss_pred ecCCCccc-cccCCCcEEEEecccccC-----Cccccc-chhhcHHHHHHhCCCCCcEEEEeC-CCCeEEecCcceEEEE
Q 017872 158 SGYVPFVF-GVEGTGARLALVGRGRDV-----AEAKYS-DWVRLRKPLEKLRPPSVTELLLSN-DGDQLLEGSITNFFVV 229 (365)
Q Consensus 158 ~~~~~~~~-~~~~~Gv~l~~~~~~r~~-----~~~K~~-~~~~~~~~l~~a~~~g~de~lL~~-~gg~v~Egs~sN~F~v 229 (365)
.|++++.. .++.+|+++.++++.|.. +.+|++ ||........+|+++|+||+|+.+ +| +|+||+++|||++
T Consensus 125 ~p~~~~~~~~~~~~gv~l~~~~~~r~~~~~~~~~~K~~~ny~~~~la~~~A~~~G~de~l~ld~~G-~V~Egs~sNif~v 203 (309)
T 1iye_A 125 FPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALDVNG-YISEGAGENLFEV 203 (309)
T ss_dssp ECCCCTTCTTHHHHCEEEEECSSCCCCTTTSCTTSCBGGGHHHHHHHHHHHHHTTCSEEEEECTTS-BEEEETTBEEEEE
T ss_pred EEcCccCCcccccCCeEEEEeeeeccCCCCCCccccchhhhHHHHHHHHHHHHcCCCEEEEECCCC-cEEEcCceEEEEE
Confidence 88876432 223469999999877754 468874 775544444567889999997655 66 9999999999999
Q ss_pred EcCCCCcchhhhhhccCCCCceEEEecCCCCCccccHHHHHHHHHHHhCCCCEEEEecCHHHHhhhceeeeeecccceEE
Q 017872 230 CRKDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSSLRVLQH 309 (365)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giLpGItR~~vle~a~~~gi~v~E~~i~~~eL~~adEvFltnS~~gi~P 309 (365)
++++ |+|||+++++|+||||+.||++|+++|++|+|+.++++||..|||+|+|||++||+|
T Consensus 204 ~~g~-------------------l~TP~l~~~iL~GitR~~ll~~a~~~g~~v~E~~i~~~eL~~adevfltns~~gv~P 264 (309)
T 1iye_A 204 KDGV-------------------LFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITP 264 (309)
T ss_dssp ETTE-------------------EEECCGGGTCCCCHHHHHHHHHHHHTTCCEEECCCBTTHHHHCSEEEEEETTTEEEE
T ss_pred ECCE-------------------EECCCCCCCCCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHhhCcEEEEccCCCEEEE
Confidence 9997 999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCcccccccccccccccccccccCCCccHHHHHHHHHHHHHHhc
Q 017872 310 VESIQVPKTWELQESDCWNDIAWEQKLFEGGPGMITKTIQEEIMERAGL 358 (365)
Q Consensus 310 V~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~vt~~L~~~~~~~~~~ 358 (365)
|++|++ ..+.+|.+||+|++|+++|.+.+..
T Consensus 265 V~~id~------------------~~~~~g~~g~~~~~l~~~~~~~~~g 295 (309)
T 1iye_A 265 VRSVDG------------------IQVGEGRCGPVTKRIQQAFFGLFTG 295 (309)
T ss_dssp EEEETT------------------EECTTSSCCHHHHHHHHHHHGGGTT
T ss_pred EEEECC------------------EECCCCCCCHHHHHHHHHHHHHHcC
Confidence 999998 2355678999999999999988764
No 4
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A*
Probab=100.00 E-value=9.3e-51 Score=393.52 Aligned_cols=275 Identities=20% Similarity=0.246 Sum_probs=220.2
Q ss_pred eEEEECCeeecCCCCCcccccccC---CCeEEEEEEEEcC--cccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 017872 5 RIVFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTHNN--GSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGL 79 (365)
Q Consensus 5 ~~~~~nG~~~~~~~~~~is~~~~~---G~GvFEt~r~~~g--~~~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~ 79 (365)
.++|+||+++ +.+++.++++|++ |||+|||||+++| +.++|+|++|++||.+||+.|+|+.|
T Consensus 6 ~~~~~nG~~~-~~~~~~i~~~d~g~~yG~gvFEtir~~~g~~g~~~~~l~~Hl~RL~~Sa~~l~~~~~------------ 72 (308)
T 2eiy_A 6 GLIWMNGAFV-PQEEAKTSVLSHALHYGTSVFEGIRAYETAKGPAIFRLKEHVKRFYNSAKVLRMEIP------------ 72 (308)
T ss_dssp CSEEETTEEE-CGGGCCCCTTCHHHHHCCEEECCEEEECCTTSCEEETHHHHHHHHHHHHHHTTCCCS------------
T ss_pred CeEEECCEEe-EhHHCccCccchHhhhcceEEEEEEEECCCCcccccCHHHHHHHHHHHHHHhCCCCC------------
Confidence 3789999999 8888999999885 9999999999987 11599999999999999999999755
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhhhhhcCCCcceEEEEEEEecCCCCCCccCCCCCCC-CcceeEEEEee
Q 017872 80 EPIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDDF-LGVFDVSVHFS 158 (365)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~l~~li~~~~~~~l~~~l~~~~~~~~~~iri~vt~g~~~~~~~~~~g~~~~-~~~~~~~v~~~ 158 (365)
++.+.+.+.+.+++. .++..+++||+++++|.+. +|..+. ...+.++|.+.
T Consensus 73 ---------~~~~~l~~~i~~~~~-------------~~~~~~~~iR~~v~~g~~~------~~~~p~~~~~~~~~i~~~ 124 (308)
T 2eiy_A 73 ---------FAPEELEEAIKEVVR-------------RNGYRSCYIRPLAWMGAKA------LGVNPLPNNPAEVMVAAW 124 (308)
T ss_dssp ---------SCHHHHHHHHHHHHH-------------HTTCSSEEEEEEEECCSSC------CSSCCGGGCSCEEEEEEE
T ss_pred ---------CCHHHHHHHHHHHHH-------------hCCCCcEEEEEEEEecCCc------cCcCCCCCCCeEEEEEEE
Confidence 223344444444442 3445689999999988643 232222 24578888888
Q ss_pred cCCCccc-cccCCCcEEEEecccccC-----Ccccccc-hhhcHHHHHHhCCCCCcEEEEeC-CCCeEEecCcceEEEEE
Q 017872 159 GYVPFVF-GVEGTGARLALVGRGRDV-----AEAKYSD-WVRLRKPLEKLRPPSVTELLLSN-DGDQLLEGSITNFFVVC 230 (365)
Q Consensus 159 ~~~~~~~-~~~~~Gv~l~~~~~~r~~-----~~~K~~~-~~~~~~~l~~a~~~g~de~lL~~-~gg~v~Egs~sN~F~v~ 230 (365)
|++++.. ..+.+|+++.++++.|.. +.+|+++ |........+|++.|+||+|+.+ +| +|+||+++|||+++
T Consensus 125 p~~~~~~~~~~~~gv~l~~~~~~r~~~~~~~~~~Kt~~ny~~~~la~~~A~~~G~de~l~ld~~G-~V~Egs~sNif~v~ 203 (308)
T 2eiy_A 125 EWGAYLGEEAVRKGARLITSSWARFPANVMPGKAKVGGNYVNSALAKMEAVAAGADEALLLDEEG-YVAEGSGENLFFVR 203 (308)
T ss_dssp EC--------CCSCEEEEECSSCBCCTTTSCTTSCBGGGHHHHHHHHHHHHHTTCSEEEEEBTTS-SEEEESSCEEEEEE
T ss_pred EcCccCCcccccCCeEEEEecceecCCCCcCcceehhhhHHHHHHHHHHHHHcCCCEEEEECCCC-eEEEcCceEEEEEE
Confidence 8876432 224579999999887754 4689877 64444444567889999997554 66 99999999999999
Q ss_pred cCCCCcchhhhhhccCCCCceEEEecCCCCCccccHHHHHHHHHHHhCCCCEEEEecCHHHHhhhceeeeeecccceEEE
Q 017872 231 RKDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSSLRVLQHV 310 (365)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giLpGItR~~vle~a~~~gi~v~E~~i~~~eL~~adEvFltnS~~gi~PV 310 (365)
+++ |+|||+++ +|+||||+.||++|+++|++|+|+.++++||..|||+|+|||++||+||
T Consensus 204 ~g~-------------------l~TP~~~~-iL~GitR~~ll~~a~~~g~~v~E~~i~~~dL~~adevfltns~~gv~pV 263 (308)
T 2eiy_A 204 DGV-------------------IYALEHSV-NLEGITRDSVIRIAKDLGYEVQVVRATRDQLYMADEVFMTGTAAEVTPV 263 (308)
T ss_dssp TTE-------------------EEEECCTT-SCCCHHHHHHHHHHHHTTCCEEEECCCHHHHHTCSEEEEEETTTEEEEE
T ss_pred CCE-------------------EEeCCcCC-CCchHHHHHHHHHHHHCCCeEEEEeCCHHHHhhCCEEEEccCcceEEEE
Confidence 997 99999988 9999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCcccccccccccccccccccccCCCccHHHHHHHHHHHHHHhcc
Q 017872 311 ESIQVPKTWELQESDCWNDIAWEQKLFEGGPGMITKTIQEEIMERAGLG 359 (365)
Q Consensus 311 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~vt~~L~~~~~~~~~~~ 359 (365)
.+|++ ..+.+|.+||+|++|+++|.+.+...
T Consensus 264 ~~id~------------------~~~~~g~~g~~~~~l~~~~~~~~~~~ 294 (308)
T 2eiy_A 264 SMIDW------------------RPIGKGTAGPVALRLREVYLEAVTGR 294 (308)
T ss_dssp EEETT------------------EECTTSSCCHHHHHHHHHHHHHHTTC
T ss_pred EEEcC------------------EECCCCCCCHHHHHHHHHHHHHHcCC
Confidence 99998 23556778999999999999987653
No 5
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum}
Probab=100.00 E-value=1e-50 Score=395.48 Aligned_cols=265 Identities=17% Similarity=0.166 Sum_probs=194.1
Q ss_pred eEEEEC---Cee--ecCCCCCcccccccC---CCeEEEEEEEEcCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCC
Q 017872 5 RIVFSN---GVV--SQASDTPSVSTFLQE---RRGAYTTTRTHNNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTP 76 (365)
Q Consensus 5 ~~~~~n---G~~--~~~~~~~~is~~~~~---G~GvFEt~r~~~g~~~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~ 76 (365)
.++|+| |++ + +.+++.|+++|++ |||+|||||+++| ++|+|++|++||.+||+.|+|+.|
T Consensus 15 ~~v~~n~~~G~~~~~-~~~~a~i~~~Drg~~yGdgvFEtirv~~G--~~~~l~~Hl~RL~~Sa~~L~i~~p--------- 82 (315)
T 3sno_A 15 VILIVEPYGGSIRQQ-NPNLPMVFWDDAALTRGDGIFETLLIRDG--HACNVRRHGERFKASAALLGLPEP--------- 82 (315)
T ss_dssp EEEEECSTTCCEEEE-CTTSCCCCTTBTTTTTCCEEEEEEEEETT--EETTHHHHHHHHHHHHHHHTCCCC---------
T ss_pred EEEEEECCCCeEEEe-eHHHCcccccchHhhcCCEeEEEEEEECC--EECCHHHHHHHHHHHHHHhCCCCc---------
Confidence 589999 999 9 9999999999985 9999999999999 899999999999999999999755
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhhhhhcCCCcceEEEEEEEecCCCCCCccCCCCCCCCcceeEEEE
Q 017872 77 SGLEPIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVH 156 (365)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~~~~~l~~~l~~~~~~~~~~iri~vt~g~~~~~~~~~~g~~~~~~~~~~~v~ 156 (365)
+.+.+.+.+.+++. .. ...++..+++||+++++|.+.. ..|++++.
T Consensus 83 -------------~~~~l~~~i~~~v~----~~-----~~~n~~~~~~iRl~vtrG~~~~------------g~p~~~v~ 128 (315)
T 3sno_A 83 -------------ILEDWEKATQMGIE----SW-----YSHPNAGEASCTWTLSRGRSST------------GLASGWLT 128 (315)
T ss_dssp -------------CHHHHHHHHHHHHH----HH-----HTC--CCCEEEEEEEECCBTTT------------CCCEEEEE
T ss_pred -------------CHHHHHHHHHHHHH----hh-----cccCCCCCEEEEEEEEeCCCCC------------CCCEEEEE
Confidence 13334444444442 11 1124567899999999986531 13678888
Q ss_pred eecCCCccccccCCCcEEEEecccc-----------------------c----CCcccccchhhcHHHHHHhCCCCCcEE
Q 017872 157 FSGYVPFVFGVEGTGARLALVGRGR-----------------------D----VAEAKYSDWVRLRKPLEKLRPPSVTEL 209 (365)
Q Consensus 157 ~~~~~~~~~~~~~~Gv~l~~~~~~r-----------------------~----~~~~K~~~~~~~~~~l~~a~~~g~de~ 209 (365)
+.|+++.+...+..|+++.+++.+. . ...+|+.||........+|+++|+||+
T Consensus 129 ~~p~~~~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~~~r~~~s~~~~~~~p~~l~~~Kt~nyl~~vla~~~A~~~G~de~ 208 (315)
T 3sno_A 129 ITPVSSDKLAQREHGVSVMTSSRGYSIDTGLPGIGKATRGELSKVERTPAPWLTVGAKTLAYAANMAALRYAKSNGFDDV 208 (315)
T ss_dssp EEECCHHHHHHHHHCEEEEEEEC-----------------------------------------------------CEEE
T ss_pred EEECCCcchhhhcCCEEEEEeccccccccccccccccccccccccccccCcccccCcchhccHHHHHHHHHHHHcCCCEE
Confidence 8898765544456799998876421 1 246898887555455557889999999
Q ss_pred EEeCCCCeEEecCcceEEEEEcCCCCcchhhhhhccCCCCceEEEecCCCCCccccHHHHHHHHHHHhCCCCEEEEecCH
Q 017872 210 LLSNDGDQLLEGSITNFFVVCRKDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSW 289 (365)
Q Consensus 210 lL~~~gg~v~Egs~sN~F~v~~~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giLpGItR~~vle~a~~~gi~v~E~~i~~ 289 (365)
|+.+..| |+||+++|||++++++ |+|||++.++|+||||+.||++|+++|++|+|+.+++
T Consensus 209 l~l~~~G-v~E~s~sN~f~~~~g~-------------------l~TPp~~~~iL~GitR~~ll~~a~~~g~~v~e~~i~~ 268 (315)
T 3sno_A 209 IFTDGDR-VLEGATSTVVSFKGDK-------------------IRTPSPGGDILPGTTQAALFAHATEKGWRCKEKDLSI 268 (315)
T ss_dssp EEEETTE-EEEESSSEEEEEETTE-------------------EEEECCC------HHHHHHHHHHHHTTCEEEEECCBH
T ss_pred EEEeCCC-cEEcCCeeEEEEECCE-------------------EEcCCCCCCcChhHHHHHHHHHHHHcCCEEEEEECCH
Confidence 7655445 9999999999999987 9999999999999999999999999999999999999
Q ss_pred HHHhhhceeeeeecccceEEEEEEcCCcccccccccccccccccccccCCCccHHHHHHHHHHHHHH
Q 017872 290 SQHELWKEAFITSSLRVLQHVESIQVPKTWELQESDCWNDIAWEQKLFEGGPGMITKTIQEEIMERA 356 (365)
Q Consensus 290 ~eL~~adEvFltnS~~gi~PV~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~vt~~L~~~~~~~~ 356 (365)
+||..|||+|+|||++||+||++||+ + .+ ..+++++.|+++|++.+
T Consensus 269 ~eL~~adevfl~ns~~gv~pV~~id~---------~----------~~--~~~~~~~~l~~~~~~~~ 314 (315)
T 3sno_A 269 DDLFGADSVWLVSSVRGPVRVTRLDG---------H----------KL--RKPDNEKEIKALITKAL 314 (315)
T ss_dssp HHHHHSSEEEEEETTTEEEEEEEESS---------S----------CC--CCCTTHHHHHHHHHHHT
T ss_pred HHHHhCCeeEEEcCcccEEEEEEECC---------E----------EC--CCChHHHHHHHHHHHhh
Confidence 99999999999999999999999998 2 33 25789999999999865
No 6
>2xpf_A 4-amino-4-deoxychorismate lyase; para-aminobenzoic acid, folate biosynthesis; HET: PLP PG4; 1.75A {Pseudomonas aeruginosa} PDB: 2y4r_A* 2xpf_B*
Probab=100.00 E-value=5.5e-50 Score=386.05 Aligned_cols=260 Identities=16% Similarity=0.153 Sum_probs=211.8
Q ss_pred eEEEECCeeecCCCCCcccccccC---CCeEEEEEEEEcCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCC
Q 017872 5 RIVFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTHNNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLEP 81 (365)
Q Consensus 5 ~~~~~nG~~~~~~~~~~is~~~~~---G~GvFEt~r~~~g~~~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~~ 81 (365)
+++|+||+++ +.++++|++ |||+|||||+++| ++++|++|++||.+||+.|+|+.|
T Consensus 22 m~~~~nG~~~-----~~i~~~d~g~~yGdgvFEtir~~~G--~~~~l~~Hl~RL~~Sa~~l~~~~~-------------- 80 (292)
T 2xpf_A 22 MLDWVDGRPA-----AELSVRDRGLAYGDGLFETLAVRAG--TPRLLERHLARLEEGCRRLAIPLD-------------- 80 (292)
T ss_dssp -CEEETTEEC-----SEEETTBHHHHHCCEEEEEEEEETT--EETTHHHHHHHHHHHHHHTTCCCC--------------
T ss_pred cEEEECCEEE-----EEEcccchhhhcCcEeEEEEEEECC--EECCHHHHHHHHHHHHHhcCCCCC--------------
Confidence 4799999998 678888874 9999999999998 899999999999999999999633
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhhhhhhhhhhhcCCCcceEEEEEEEecCCCCCCccCCCCCC-CCcceeEEEEeecC
Q 017872 82 IRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDD-FLGVFDVSVHFSGY 160 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~l~~li~~~~~~~l~~~l~~~~~~~~~~iri~vt~g~~~~~~~~~~g~~~-~~~~~~~~v~~~~~ 160 (365)
.+.+.+.+.++++ . ..+++||++|++|.+. .|..+ ....|+++|.+.|+
T Consensus 81 ---------~~~l~~~i~~~v~-------------~--~~~~~iR~~v~rg~~~------~g~~p~~~~~~~~~i~~~p~ 130 (292)
T 2xpf_A 81 ---------TAALRQELLAFCA-------------A--LGDGVAKLIVTRGEGL------RGYAPPAEASPRRILSGSPR 130 (292)
T ss_dssp ---------HHHHHHHHHHHHH-------------H--HCSEEEEEEEECCBCC------SSSSCCTTCCCEEEEEEECC
T ss_pred ---------HHHHHHHHHHHHH-------------h--CCCcEEEEEEEecCCC------CCCCCCCCCCcEEEEEEEEC
Confidence 2234444444442 1 1368999999988542 12222 23467889999999
Q ss_pred CCccccccCCCcEEEEeccccc----CCcccccchhhcHHHHHHhCCCCCcEEEEe-CCCCeEEecCcceEEEEEcCCCC
Q 017872 161 VPFVFGVEGTGARLALVGRGRD----VAEAKYSDWVRLRKPLEKLRPPSVTELLLS-NDGDQLLEGSITNFFVVCRKDNS 235 (365)
Q Consensus 161 ~~~~~~~~~~Gv~l~~~~~~r~----~~~~K~~~~~~~~~~l~~a~~~g~de~lL~-~~gg~v~Egs~sN~F~v~~~~~~ 235 (365)
++++...+.+|+++.+++.+|. .+.+|+.||........+|+++|+||+|+. .+| +|+||+++|||++++++
T Consensus 131 ~~~~~~~~~~gv~l~~~~~~~~~~~~~~~~Kt~ny~~~~la~~~A~~~G~de~L~ld~~G-~V~Egs~sNif~v~~g~-- 207 (292)
T 2xpf_A 131 PAYPERHWQQGVRLFACRTRLAEQPLLAGLKHLNRLEQVLARAEWSDAGHAEGLMLDVHE-RVVEGVFSNLLLVLDGT-- 207 (292)
T ss_dssp CCCCHHHHHTCEEEEECCCCBCCCTTTTBCCBSCCHHHHHHHTTCCCTTCSEEEEEBTTC-CEEEESSSEEEEEETTE--
T ss_pred CccchhhccCCeEEEEeeeeccCCCCCCCcchhhhHHHHHHHHHHHHcCCCEEEEECCCC-CEEEcCCeEEEEEECCE--
Confidence 8754344467999999887653 347899887554444456889999999755 577 99999999999999987
Q ss_pred cchhhhhhccCCCCceEEEecCCCCCccccHHHHHHHHHHHhCCCCEEEEecCHHHHhhhceeeeeecccceEEEEEEcC
Q 017872 236 EAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSSLRVLQHVESIQV 315 (365)
Q Consensus 236 ~~~~~~~~~~~~~~~~~l~TPpl~~giLpGItR~~vle~a~~~gi~v~E~~i~~~eL~~adEvFltnS~~gi~PV~~i~~ 315 (365)
|+|||+++++||||||+.||++|+++|++|+|+.++++||..|||+|+|||++||+||++|++
T Consensus 208 -----------------l~TPpl~~~iL~GitR~~vl~~a~~~G~~v~E~~i~~~eL~~adevfltns~~gv~PV~~id~ 270 (292)
T 2xpf_A 208 -----------------LVAPDLRRCGVAGVMRAELLERAEGIGVPLAIRDVSMAELATADEVFLCNSQFGIWPVRALDE 270 (292)
T ss_dssp -----------------EEEECCSSSSBCCHHHHHHHHHHHHTTCCEEEECBCHHHHHTCSEEEEEETTTEEEEEEEETT
T ss_pred -----------------EEeCCCCCccCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHhCCEEEEEcCcccEEEEEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CcccccccccccccccccccccCCCccHHHHHHHHHHHHHH
Q 017872 316 PKTWELQESDCWNDIAWEQKLFEGGPGMITKTIQEEIMERA 356 (365)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~g~~G~vt~~L~~~~~~~~ 356 (365)
+ .+. +||+|++|+++|.+.+
T Consensus 271 ---------~----------~~~--~g~~t~~l~~~~~~~~ 290 (292)
T 2xpf_A 271 ---------H----------VWP--VGELTRKLQDQLRDDL 290 (292)
T ss_dssp ---------E----------ECC--CCHHHHHHHHHHHHHH
T ss_pred ---------E----------EeC--CCHHHHHHHHHHHHHh
Confidence 2 232 6899999999998765
No 7
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A*
Probab=100.00 E-value=7.6e-50 Score=380.04 Aligned_cols=256 Identities=18% Similarity=0.162 Sum_probs=208.3
Q ss_pred EEECCeeecCCCCCcccccccC---CCeEEEEEEEEcCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCC
Q 017872 7 VFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTHNNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLEPIR 83 (365)
Q Consensus 7 ~~~nG~~~~~~~~~~is~~~~~---G~GvFEt~r~~~g~~~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~~~~ 83 (365)
+|+||+.. +.++++|++ |||+|||||+++| ++|+|++|++||.+||+.|+|+.|
T Consensus 2 ~~~nG~~~-----~~i~~~d~g~~yG~gvfEtir~~~G--~~~~l~~Hl~RL~~Sa~~l~~~~~---------------- 58 (269)
T 1i2k_A 2 FLINGHKQ-----ESLAVSDRATQFGDGCFTTARVIDG--KVSLLSAHIQRLQDACQRLMISCD---------------- 58 (269)
T ss_dssp EEETTEEE-----SCCCTTCHHHHHCCEEEEEEEEETT--EETTHHHHHHHHHHHHHHTTCCCC----------------
T ss_pred EEECCCcC-----CccCccccccccceeEEEEEEEECC--EEecHHHHHHHHHHHHHhcCCCCC----------------
Confidence 89999943 678888874 9999999999998 899999999999999999999744
Q ss_pred CCCCCCchhHHHHHHHHHHHHHhhhhhhhhhhhcCCCcceEEEEEEEecCC-CCCCccCCCCCCCCcceeEEEEeecCCC
Q 017872 84 TPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYG-KLSGIENMGSDDFLGVFDVSVHFSGYVP 162 (365)
Q Consensus 84 ~~~~~~~~~~~~~~l~~li~~~~~~~l~~~l~~~~~~~~~~iri~vt~g~~-~~~~~~~~g~~~~~~~~~~~v~~~~~~~ 162 (365)
+.+.+.+.+.+++. .+ .+++||++|++|.+ .++.+ +....|++++.+.|+++
T Consensus 59 ------~~~~l~~~i~~~~~-------------~~--~~~~iR~~v~~g~~~~g~~p------~~~~~~~~~i~~~p~~~ 111 (269)
T 1i2k_A 59 ------FWPQLEQEMKTLAA-------------EQ--QNGVLKVVISRGSGGRGYST------LNSGPATRILSVTAYPA 111 (269)
T ss_dssp ------CHHHHHHHHHHHHH-------------HH--CSEEEEEEEECCSCCSTTCC------TTCCCCEEEEEEECCCS
T ss_pred ------CHHHHHHHHHHHHH-------------hC--CCeEEEEEEEcCCCCCCCCC------ccCCCcEEEEEEEECCC
Confidence 13334444444442 11 36899999998854 33221 12356889999999987
Q ss_pred ccccccCCCcEEEEeccccc----CCcccccchhhcHHHHHHhCCCCCcEEEEe-CCCCeEEecCcceEEEEEcCCCCcc
Q 017872 163 FVFGVEGTGARLALVGRGRD----VAEAKYSDWVRLRKPLEKLRPPSVTELLLS-NDGDQLLEGSITNFFVVCRKDNSEA 237 (365)
Q Consensus 163 ~~~~~~~~Gv~l~~~~~~r~----~~~~K~~~~~~~~~~l~~a~~~g~de~lL~-~~gg~v~Egs~sN~F~v~~~~~~~~ 237 (365)
++...+.+|+++.+++.+|. .+.+|+.||........+|+++|+||+|+. .+| +|+||+++|||++++++
T Consensus 112 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~Kt~n~~~~~~a~~~A~~~G~de~l~ld~~G-~v~E~s~sNif~v~~g~---- 186 (269)
T 1i2k_A 112 HYDRLRNEGITLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNADEALVLDSEG-WVTECCAANLFWRKGNV---- 186 (269)
T ss_dssp HHHHHHHHCEEEEECSCCBCCCTTTTBCCBSCCHHHHHHHHHHTTSSCSEEEEEBTTS-BEEECSSSEEEEEETTE----
T ss_pred cchhhhcCCeEEEEeceecCCCCcccCcchhhhHHHHHHHHHHHHCCCCEEEEECCCC-cEEEcCceEEEEEECCE----
Confidence 54333457999999887664 347999888544444557889999999755 466 99999999999999997
Q ss_pred hhhhhhccCCCCceEEEecCCCCCccccHHHHHHHHHHHhCCCCEEEEecCHHHHhhhceeeeeecccceEEEEEEcCCc
Q 017872 238 EDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSSLRVLQHVESIQVPK 317 (365)
Q Consensus 238 ~~~~~~~~~~~~~~~l~TPpl~~giLpGItR~~vle~a~~~gi~v~E~~i~~~eL~~adEvFltnS~~gi~PV~~i~~~~ 317 (365)
|+|||+++++|+||||+.||++|+++|++|+|+.++++||..|||+|+|||++||+||.+|++
T Consensus 187 ---------------l~TP~~~~~iL~GitR~~ll~~a~~~g~~v~e~~i~~~eL~~adevfltns~~gv~pV~~id~-- 249 (269)
T 1i2k_A 187 ---------------VYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVEVQASLEESLQADEMVICNALMPVMPVCACGD-- 249 (269)
T ss_dssp ---------------EEEECCSSSSBCCHHHHHHHHHHHHSSSEEEEECCBHHHHHTCSEEEEECSSSCEEEEEEETT--
T ss_pred ---------------EECCCCccCccCCHHHHHHHHHHHHcCCeEEEEECCHHHHhhCCEEEEcCChhheEEEEEECC--
Confidence 999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccccccccccccccccccccCCCccHHHHHHHHHHH
Q 017872 318 TWELQESDCWNDIAWEQKLFEGGPGMITKTIQEEIM 353 (365)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~g~~G~vt~~L~~~~~ 353 (365)
+ .+. .||+|++|+++|.
T Consensus 250 -------~---------~~~---~g~~~~~l~~~~~ 266 (269)
T 1i2k_A 250 -------V---------SFS---SATLYEYLAPLCE 266 (269)
T ss_dssp -------E---------ECC---CCHHHHHHHHHHH
T ss_pred -------E---------Eec---CcHHHHHHHHHHh
Confidence 2 232 2799999999986
No 8
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans}
Probab=100.00 E-value=6.5e-50 Score=394.15 Aligned_cols=282 Identities=15% Similarity=0.154 Sum_probs=220.4
Q ss_pred EECCeeecCCCCCcccccccC---CCeEEEEEEEEcCc---ccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCC
Q 017872 8 FSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTHNNG---SCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLEP 81 (365)
Q Consensus 8 ~~nG~~~~~~~~~~is~~~~~---G~GvFEt~r~~~g~---~~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~~ 81 (365)
|+||+++ +.+++.|+++|++ |||||||||+|+|. .++|+|++|++||.+||+.|+|+ |
T Consensus 34 w~nG~~v-p~~~~~i~~~d~gl~yGdgvFE~ir~~~g~dg~~~~f~l~~Hl~RL~~Sa~~L~i~-~-------------- 97 (345)
T 4dqn_A 34 WDDGKLT-EDATLHISESSPALHYGQEAFEGLKAYRTKDGSVQLFRPNMNAERLQRTADRLLMP-Q-------------- 97 (345)
T ss_dssp ECCCEEE-SCCSCCCCTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC-C--------------
T ss_pred EECCEEe-EhhhcccCccccccccccEEEEEEEEEeCCCCcccccCHHHHHHHHHHHHHHhCCC-C--------------
Confidence 9999999 9899999998884 99999999999871 12999999999999999999997 4
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhhhhhhhhhhhcCCCcceEEEEEEEecCCCCCCccCCCCCCCCcceeEEEEeecCC
Q 017872 82 IRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVHFSGYV 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~l~~li~~~~~~~l~~~l~~~~~~~~~~iri~vt~g~~~~~~~~~~g~~~~~~~~~~~v~~~~~~ 161 (365)
++.+.+.+.+.++++.+ ..++ .......++|||++++++.+. +|..+. ..++++|.+.|++
T Consensus 98 -------~~~~~l~~~i~~lv~~n-~~~v----p~~~~~~~~yiR~~v~~~~~~------~g~~p~-~~~~~~i~~~p~~ 158 (345)
T 4dqn_A 98 -------VPTDKFIDAAKQVVRAN-EEYV----PPYGTGATLYLRPLLIGVGDV------IGVHPA-DEYIFTIFAMPVG 158 (345)
T ss_dssp -------CCHHHHHHHHHHHHHHT-GGGS----CCTTSSCEEEEEEEEEEESCC------CSSCCC-SEEEEEEEEEEEC
T ss_pred -------CCHHHHHHHHHHHHHhc-cccC----CCCCCCCcEEEEEEEEeCCCc------cCCCCC-CCeEEEEEEEECc
Confidence 13455555555555321 0000 000023578999999988653 233332 3688889988887
Q ss_pred CccccccCCCcEEEEec-ccccCC----cccc-cchhhcHHHHHHhCCCCCcEEEEeCC--CCeEEecCcceEEEE-EcC
Q 017872 162 PFVFGVEGTGARLALVG-RGRDVA----EAKY-SDWVRLRKPLEKLRPPSVTELLLSND--GDQLLEGSITNFFVV-CRK 232 (365)
Q Consensus 162 ~~~~~~~~~Gv~l~~~~-~~r~~~----~~K~-~~~~~~~~~l~~a~~~g~de~lL~~~--gg~v~Egs~sN~F~v-~~~ 232 (365)
++... ..+|+++.+++ +.|..+ .+|+ .||.....+..+|+++|+||+|+.++ .|+|+|++++|||+| +++
T Consensus 159 ~~~~~-~~~gv~l~~~~~~~R~~~~~~~~~Kt~~nyl~~vla~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v~~~g 237 (345)
T 4dqn_A 159 NYFKG-GLAPTNFLIQDDYDRAAPHGTGAAKVGGNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGITKDN 237 (345)
T ss_dssp CSCTT-SCCCEEEEECTTCCSSCTTSSTTSCCHHHHHHHHHHHHHHHHTTCSCEEEECTTTSCBEEEETTEEEEEEETTC
T ss_pred ccccc-CCCCEEEEEccceEecCCCccccccccccCHHHHHHHHHHHHCCCCEEEEEcCCCCCeEEEcCCceEEEEecCC
Confidence 65322 24799999998 577654 6898 78865555556788999999975443 239999999999999 677
Q ss_pred CCCcchhhhhhccCCCCceEEEecCCCCCccccHHHHHHHHHHHh-CCCCEEEEecCHHHHhhhceeeeeecccceEEEE
Q 017872 233 DNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRS-KGIPIRELASSWSQHELWKEAFITSSLRVLQHVE 311 (365)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~TPpl~~giLpGItR~~vle~a~~-~gi~v~E~~i~~~eL~~adEvFltnS~~gi~PV~ 311 (365)
+ |+||| +.++||||||+.||++|++ +|++|+|+.++++||..|||+|+|||+++|+||.
T Consensus 238 ~-------------------l~TP~-~~~iL~GitR~~vl~la~~~~g~~v~e~~i~~~el~~adevf~t~t~~~i~PV~ 297 (345)
T 4dqn_A 238 E-------------------FITPL-SPSILPSVTKYSLLYLAEHRFGMKAIEGDVCVDELDKFVEAGACGTAAVISPIG 297 (345)
T ss_dssp E-------------------EEECC-CTTSCCCHHHHHHHHHHHHTTCCEEEECCCBTTCGGGEEEEEEEETTTEEEEEE
T ss_pred E-------------------EEeCC-CCCccHHHHHHHHHHHHHhccCCeEEEEeCCHHHHHhhhHHhhhcchhHEEEEE
Confidence 6 99999 8999999999999999999 9999999999999999999999999999999999
Q ss_pred EEcCCcccccccccccccccccccccCC-CccHHHHHHHHHHHHHHhcc
Q 017872 312 SIQVPKTWELQESDCWNDIAWEQKLFEG-GPGMITKTIQEEIMERAGLG 359 (365)
Q Consensus 312 ~i~~~~~~~~~~~~~~~~~~~~~~~~~g-~~G~vt~~L~~~~~~~~~~~ 359 (365)
+|++.. +. ..+.++ .+||+|++|+++|.+++...
T Consensus 298 ~Id~~~-------~~-------~~i~~~~~~Gpvt~~L~~~~~~i~~g~ 332 (345)
T 4dqn_A 298 GVQHGD-------DF-------HVFYSETEVGPVTHKLYDELTGIQFGD 332 (345)
T ss_dssp EEEETT-------EE-------EESSCSSSCCHHHHHHHHHHHHHHTTS
T ss_pred EECccc-------ce-------eeeCCCCCcCHHHHHHHHHHHHHHcCC
Confidence 999810 00 023343 59999999999999988664
No 9
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila}
Probab=100.00 E-value=2.1e-49 Score=378.46 Aligned_cols=259 Identities=18% Similarity=0.195 Sum_probs=206.7
Q ss_pred CCCceEEEECCeeecCCCCCcccccccC---CCeEEEEEEEEcCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCC
Q 017872 1 MTSTRIVFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTHNNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPS 77 (365)
Q Consensus 1 M~~~~~~~~nG~~~~~~~~~~is~~~~~---G~GvFEt~r~~~g~~~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~ 77 (365)
|+ +++|+|| .+++.|+++|++ |||+|||||+++| ++|+|++|++||.+||+.|+|+.|
T Consensus 2 m~--~~~~~nG-----~~~a~i~~~d~g~~yG~gvFEtir~~~g--~~~~l~~Hl~RL~~Sa~~l~i~~p---------- 62 (272)
T 3lul_A 2 MP--TRVIEDK-----GDMTPSFGIDDRIFLGEGLFETIRVNSS--KPSFAYMHWERLGNSARQLGIPFE---------- 62 (272)
T ss_dssp CC--EEECCCC-----C--CCCCCTTBGGGGTCEEEEEEEEETT--EESSHHHHHHHHHHHHHHHTCCCC----------
T ss_pred Cc--eEEEECC-----ccccccCCccchhhcceEeEEEEEEECC--EeCCHHHHHHHHHHHHHHhCCCCC----------
Confidence 65 4899999 345789988885 9999999999999 899999999999999999999765
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhhhhhcCCCcceEEEEEEEecCC-CCCCccCCCCCCCCcceeEEEE
Q 017872 78 GLEPIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYG-KLSGIENMGSDDFLGVFDVSVH 156 (365)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~l~~li~~~~~~~l~~~l~~~~~~~~~~iri~vt~g~~-~~~~~~~~g~~~~~~~~~~~v~ 156 (365)
++.+.+.+.+.+++. .++..+++||+++++|.+ +++.+ +....+++++.
T Consensus 63 -----------~~~~~l~~~i~~l~~-------------~~~~~~~~irl~v~rg~~~~g~~~------~~~~~~~~~~~ 112 (272)
T 3lul_A 63 -----------ISFDDWFEHLIQKIQ-------------KDNLYHGGIKAILSGGPASRGLAE------RGQVSQLIFQT 112 (272)
T ss_dssp -----------CCHHHHHHHHHHHHH-------------HTTCSSEEEEEEEECCBCCSSTTC------CCSSEEEEEEE
T ss_pred -----------CCHHHHHHHHHHHHH-------------hcCCCCEEEEEEEEecCCccCcCC------CCCCCcEEEEE
Confidence 234444444444442 455678999999998864 22222 12344677766
Q ss_pred eecCCCccccccCCCcEEEEecccccC----CcccccchhhcHHHHHHhCCCCCcEEEE-eCCCCeEEecCcceEEEEEc
Q 017872 157 FSGYVPFVFGVEGTGARLALVGRGRDV----AEAKYSDWVRLRKPLEKLRPPSVTELLL-SNDGDQLLEGSITNFFVVCR 231 (365)
Q Consensus 157 ~~~~~~~~~~~~~~Gv~l~~~~~~r~~----~~~K~~~~~~~~~~l~~a~~~g~de~lL-~~~gg~v~Egs~sN~F~v~~ 231 (365)
.|+++. ..++++.++++.|.. +.+|+.||........+|+++|+||+|+ |.+| +|+||+++|||++++
T Consensus 113 -~p~~~~-----~~~v~l~~~~~~r~~~~~~~~~Kt~nyl~~~la~~~A~~~G~de~L~ld~~g-~v~E~~~sNif~~~~ 185 (272)
T 3lul_A 113 -FNYSIQ-----KHPVRLISINWLRDKANPLYQLKSVNYLEAIIAQRQAIAVGADDALFFNTEN-HVTETTCANLFLIEN 185 (272)
T ss_dssp -ECCCCC-----CSCEEEEEEEEEECTTCGGGGSCBSCCHHHHHHHHHHHHTTCSEEEEEETTS-BEEEESSCEEEEEET
T ss_pred -ECCCCc-----cccEEEEEEeEEecCCCcccchhhhccHHHHHHHHHHHHcCCCEEEEECCCC-eEEEcCCeEEEEEEC
Confidence 565432 124888888888853 4689988755444455688899999974 5577 999999999999999
Q ss_pred CCCCcchhhhhhccCCCCceEEEecCCCCCccccHHHHHHHHHHHhCCCCEEEEecCHHHHhhhceeeeeecccceEEEE
Q 017872 232 KDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSSLRVLQHVE 311 (365)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giLpGItR~~vle~a~~~gi~v~E~~i~~~eL~~adEvFltnS~~gi~PV~ 311 (365)
++ |+|||+++++||||||+.||++|+++|++|+|+.++++||..|||+|+|||++||+||+
T Consensus 186 g~-------------------l~TP~l~~~iL~GitR~~ll~la~~~g~~v~e~~i~~~el~~adevf~~ns~~~v~PV~ 246 (272)
T 3lul_A 186 NI-------------------LYTPRVEDGILPGITRARLISHCQQHKMSVQEISLTKKRIEDADAVFLTNSLQGIRRVL 246 (272)
T ss_dssp TE-------------------EEECCGGGTCCCCHHHHHHHHHHHHTTCCEEECCCBHHHHHTCSEEEEEETTTEEEEEE
T ss_pred CE-------------------EECCCCccCcCcCHHHHHHHHHHHHcCCeEEEEECCHHHHhhCCEEEEEcCchhEEEEE
Confidence 97 99999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCcccccccccccccccccccccCCCccHHHHHHHHHHHHHHhc
Q 017872 312 SIQVPKTWELQESDCWNDIAWEQKLFEGGPGMITKTIQEEIMERAGL 358 (365)
Q Consensus 312 ~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~vt~~L~~~~~~~~~~ 358 (365)
+||+ + .+.+ |++|+++|++....
T Consensus 247 ~id~---------~---------~~~~------t~~l~~~y~~~~~~ 269 (272)
T 3lul_A 247 SLDN---------I---------IFEV------NHPIIDKLIFLLNQ 269 (272)
T ss_dssp EETT---------E---------ECCC------CCHHHHHHHHHHHH
T ss_pred EECC---------E---------Ecch------HHHHHHHHHHHHhh
Confidence 9998 2 2221 89999999887654
No 10
>3dth_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP OBZ; 1.85A {Mycobacterium smegmatis} PDB: 3dtf_A* 3dtg_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=1.1e-47 Score=381.54 Aligned_cols=287 Identities=15% Similarity=0.156 Sum_probs=225.7
Q ss_pred EEEECCeeecCCCCCcccccccC---CCeEEEEEEEE---cCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 017872 6 IVFSNGVVSQASDTPSVSTFLQE---RRGAYTTTRTH---NNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGL 79 (365)
Q Consensus 6 ~~~~nG~~~~~~~~~~is~~~~~---G~GvFEt~r~~---~g~~~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~ 79 (365)
-.|.||+++ +.+++.|+++|++ |||||||||+| +|+.++|+|++|++||.+||++|+|+ |
T Consensus 52 ~~W~~g~i~-p~~~~~i~~~d~gl~yGdgvFEglkay~~~dG~i~lFrl~~H~~RL~~Sa~~L~mp-~------------ 117 (372)
T 3dth_A 52 EGWHNAQVI-PYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIP-E------------ 117 (372)
T ss_dssp TEEEEEEEE-ESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC-C------------
T ss_pred CeEECCcEe-ehHhcccCccccHhhcCcEEEEEEEEEECCCCcEeecCHHHHHHHHHHHHHHhCCC-C------------
Confidence 379999999 8888999998884 99999999999 55334799999999999999999997 3
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhhhhhcC-CCcceEEEEEEEecCCCCCCccCCCCCCCCcceeEEEEee
Q 017872 80 EPIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERR-DGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVHFS 158 (365)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~l~~li~~~~~~~l~~~l~~~~-~~~~~~iri~vt~g~~~~~~~~~~g~~~~~~~~~~~v~~~ 158 (365)
++.+.+.+.++++++.+ ..++ . .. ....+|||++++++.+. +|+.+. ..+.++|.++
T Consensus 118 ---------~~~e~l~~~i~~lv~~n-~~~v----p-~~~~~~~lYiRp~~~~~~~~------~G~~p~-~~~~~~i~~~ 175 (372)
T 3dth_A 118 ---------LPEEVFIESLRQLIAVD-EKWV----P-PAGGEESLYLRPFVIATEPG------LGVRPS-NEYRYLLIAS 175 (372)
T ss_dssp ---------CCHHHHHHHHHHHHHHH-GGGS----C-CSSSSCEEEEEEEEEECCCC------SSCSCC-SEEEEEEEEE
T ss_pred ---------CCHHHHHHHHHHHHHhc-cccC----C-CCCCCCcEEEEEEEEcCCCc------CCcCCC-CCeEEEEEEe
Confidence 23556667777776532 1111 1 11 34679999999987642 344432 4688899999
Q ss_pred cCCCccccccCCCcEEEEec-ccccCC----cccc-cchhhcHHHHHHhCCCCCcEEE-EeC--CCCeEEecCcceEEEE
Q 017872 159 GYVPFVFGVEGTGARLALVG-RGRDVA----EAKY-SDWVRLRKPLEKLRPPSVTELL-LSN--DGDQLLEGSITNFFVV 229 (365)
Q Consensus 159 ~~~~~~~~~~~~Gv~l~~~~-~~r~~~----~~K~-~~~~~~~~~l~~a~~~g~de~l-L~~--~gg~v~Egs~sN~F~v 229 (365)
|++++... ..+|+++.++. +.|..+ .+|+ .||.....+..+|+++|+||+| ||. +| +|+|++++|||+|
T Consensus 176 p~~~y~~~-g~~~v~l~v~~~~~R~~p~g~~~~K~~gNY~~~~la~~eA~~~G~de~l~ld~~~~g-~v~E~~~sNif~v 253 (372)
T 3dth_A 176 PAGAYFKG-GIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERR-YVEEMGGMNLFFV 253 (372)
T ss_dssp EESCSSSC-SSSCEEEEECSSCCSCCTTSSTTSCCHHHHHTTHHHHHHHHHTTCSEEEEECTTTSC-BEEEETTEEEEEE
T ss_pred eCchhhcc-CCccEEEEEccceeccCCCcccchhhHhhhHHHHHHHHHHHHcCCCEEEEEcCCCCC-EEEEcCceeEEEE
Confidence 98765321 13578988875 677655 5887 5887666666678899999996 554 56 9999999999999
Q ss_pred EcCCCCcchhhhhhccCCCCceEEEecCCCCCccccHHHHHHHHHHHhCCCCEEEEecCHHHHhhh------ceeeeeec
Q 017872 230 CRKDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELW------KEAFITSS 303 (365)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giLpGItR~~vle~a~~~gi~v~E~~i~~~eL~~a------dEvFltnS 303 (365)
+++.+ |. +|+|||++.++||||||+.||++|+++|++|+|+.++++||.+| ||+|+|||
T Consensus 254 ~~~~~--------------g~-~l~TP~l~~~iL~GITR~~vl~la~~~G~~v~Er~i~~~eL~~a~~~g~~dEvf~tgT 318 (372)
T 3dth_A 254 FGSGG--------------SA-RLVTPELSGSLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKAGAGEITEVFACGT 318 (372)
T ss_dssp ESCGG--------------GC-EEEECCCCSSSCCCHHHHHHHHHHHHHTCEEEECCCBHHHHHHHHHHTSEEEEEEEET
T ss_pred ECCCC--------------ce-EEEECCCCCCcCHHHHHHHHHHHHHHCCCeEEEEECCHHHHHhhhhcCCccEEEEecc
Confidence 98810 00 29999999999999999999999999999999999999999999 99999999
Q ss_pred ccceEEEEEEcCCcccccccccccccccccccccCCCccHHHHHHHHHHHHHHhcc
Q 017872 304 LRVLQHVESIQVPKTWELQESDCWNDIAWEQKLFEGGPGMITKTIQEEIMERAGLG 359 (365)
Q Consensus 304 ~~gi~PV~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~vt~~L~~~~~~~~~~~ 359 (365)
+.+|+||.+|++.. + +..+.+|.+||+|++|+++|.+++...
T Consensus 319 a~~i~PV~~Id~~~-------~-------~~~i~~g~~Gpvt~~L~~~l~~iq~g~ 360 (372)
T 3dth_A 319 AAVITPVSHVKHHD-------G-------EFTIADGQPGEITMALRDTLTGIQRGT 360 (372)
T ss_dssp TTEEEEEEEEEETT-------E-------EEECTTSSCCHHHHHHHHHHHHHHHTS
T ss_pred cceEEEEEEEccCC-------c-------eEECCCCCcCHHHHHHHHHHHHHHcCC
Confidence 99999999999710 0 013456789999999999999987654
No 11
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=1.3e-47 Score=381.25 Aligned_cols=284 Identities=15% Similarity=0.133 Sum_probs=217.0
Q ss_pred EEECCeeecCCCCCccccccc---CCCeEEEEEEEE---cCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Q 017872 7 VFSNGVVSQASDTPSVSTFLQ---ERRGAYTTTRTH---NNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLE 80 (365)
Q Consensus 7 ~~~nG~~~~~~~~~~is~~~~---~G~GvFEt~r~~---~g~~~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~ 80 (365)
-|.||+++ |.++++|+++++ ||+||||+||+| +|+..+|++++|++||.+||+.|.||.+
T Consensus 53 gW~ng~iv-p~~~~~i~p~~~~lhYG~gvFEgiraY~~~dG~i~~Fr~~~h~~Rl~~Sa~~l~iP~~------------- 118 (372)
T 3dtg_A 53 GWHNAQVI-PYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIPEL------------- 118 (372)
T ss_dssp EEEEEEEE-ESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCCC-------------
T ss_pred cEeCCEEE-EchhceeCcchhhhhccceeeeeEEEEECCCCeEEeeCchHHHHHHhhcccccCCCCC-------------
Confidence 39999999 999999999887 499999999999 5544468999999999999999999633
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhhhhhcCCCcceEEEEEEEecCCCCCCccCCCCCCCCcceeEEEEeecC
Q 017872 81 PIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVHFSGY 160 (365)
Q Consensus 81 ~~~~~~~~~~~~~~~~~l~~li~~~~~~~l~~~l~~~~~~~~~~iri~vt~g~~~~~~~~~~g~~~~~~~~~~~v~~~~~ 160 (365)
+.+.....+++++... ++. +.+.+...++|||++++++.+. +|+.+. ..+.+++.+.|.
T Consensus 119 ---------~~e~~~~~~~~l~~~~-~~~----v~~~~~~~~~YiRp~~~~~~~~------lgv~p~-~~~~~~ii~~p~ 177 (372)
T 3dtg_A 119 ---------PEEVFIESLRQLIAVD-EKW----VPPAGGEESLYLRPFVIATEPG------LGVRPS-NEYRYLLIASPA 177 (372)
T ss_dssp ---------CHHHHHHHHHHHHHHH-GGG----SCCSSSSCEEEEEEEEEECCCC------CSCSCC-SEEEEEEEEEEE
T ss_pred ---------CHHHHHHHHHHHHHHh-hhh----ccccCCCCceEEEEEEEeecCc------cCcCCC-CCceeeeEeccc
Confidence 2344445555555422 122 2223344689999999998754 455543 456777778887
Q ss_pred CCccccccCCCcEEEEecccccCCc----cc-ccchhhcHHHHHHhCCCCCcEEE-EeC--CCCeEEecCcceEEEEE--
Q 017872 161 VPFVFGVEGTGARLALVGRGRDVAE----AK-YSDWVRLRKPLEKLRPPSVTELL-LSN--DGDQLLEGSITNFFVVC-- 230 (365)
Q Consensus 161 ~~~~~~~~~~Gv~l~~~~~~r~~~~----~K-~~~~~~~~~~l~~a~~~g~de~l-L~~--~gg~v~Egs~sN~F~v~-- 230 (365)
.++.......+..+....+.|..+. +| ..||........+|+++||||+| ||. +| +|+|++++|||+|+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~R~~p~~~~~~K~~gNY~~~~la~~eA~~~G~deal~Ld~~~~g-~V~E~~~sNiF~V~~~ 256 (372)
T 3dtg_A 178 GAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERR-YVEEMGGMNLFFVFGS 256 (372)
T ss_dssp SCSSTTSSSCEEEEECSSCCSCCTTSSTTSCCHHHHHHHHHHHHHHHHTTCSEEEEECTTTSC-BEEEETTEEEEEEESC
T ss_pred ccccccCcccceeecccceeecCcCCcchHHhcCCcchhhhHHHHHHhcCcchhhhhcccccc-ceeecCceEEEEEEec
Confidence 6654322222333333456676542 33 34665544555578899999996 553 45 99999999999995
Q ss_pred --cCCCCcchhhhhhccCCCCceEEEecCCCCCccccHHHHHHHHHHHhCCCCEEEEecCHHHHhhh------ceeeeee
Q 017872 231 --RKDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELW------KEAFITS 302 (365)
Q Consensus 231 --~~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giLpGItR~~vle~a~~~gi~v~E~~i~~~eL~~a------dEvFltn 302 (365)
++. |+|||++.+||+||||+.||++|+++|++|+|+.++++||..| ||||+||
T Consensus 257 ~kdg~-------------------liTPpl~~~iL~GITR~sVi~LA~~~Gi~V~Er~it~~El~~A~~~~~~dEvF~tG 317 (372)
T 3dtg_A 257 GGSAR-------------------LVTPELSGSLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKAGAGEITEVFACG 317 (372)
T ss_dssp GGGCE-------------------EEECCCCSSSCCCHHHHHHHHHHHHHTCEEEECCCBHHHHHHHHHHTSEEEEEEEE
T ss_pred CCCce-------------------EEeCCccccccccHHHHHHHHHHHHCCceEEEEeCCHHHHHHHhhcCCCcEEEECC
Confidence 444 9999999999999999999999999999999999999999998 9999999
Q ss_pred cccceEEEEEEcCCcccccccccccccccccccccCCCccHHHHHHHHHHHHHHhcc
Q 017872 303 SLRVLQHVESIQVPKTWELQESDCWNDIAWEQKLFEGGPGMITKTIQEEIMERAGLG 359 (365)
Q Consensus 303 S~~gi~PV~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~vt~~L~~~~~~~~~~~ 359 (365)
|+.+|+||.+|+++. . +..+++|++||+|++|+++|.+++...
T Consensus 318 Taa~I~PV~~Id~~~-------~-------~~~ig~G~~Gpvt~~L~~~~~~iq~G~ 360 (372)
T 3dtg_A 318 TAAVITPVSHVKHHD-------G-------EFTIADGQPGEITMALRDTLTGIQRGT 360 (372)
T ss_dssp TTTEEEEEEEEEETT-------E-------EEECTTSSCCHHHHHHHHHHHHHHTTS
T ss_pred CcceEEEEEEEecCC-------c-------eEEcCCCCcCHHHHHHHHHHHHHHCCC
Confidence 999999999999720 0 124778999999999999999987643
No 12
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A*
Probab=100.00 E-value=3.1e-47 Score=377.63 Aligned_cols=284 Identities=15% Similarity=0.075 Sum_probs=219.9
Q ss_pred EEEECCeeecCCCCCccccccc---CCCeEEEEEEEEcC---cccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 017872 6 IVFSNGVVSQASDTPSVSTFLQ---ERRGAYTTTRTHNN---GSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGL 79 (365)
Q Consensus 6 ~~~~nG~~~~~~~~~~is~~~~---~G~GvFEt~r~~~g---~~~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~ 79 (365)
.+|+||+++ +.+++.++++|+ +|+|+|||||+|+| +.++|+|++|++||.+||+.|+|+ |
T Consensus 46 ~~w~ng~~~-p~~~~~i~~~d~~l~yG~gvFEt~r~y~g~dG~i~~f~l~~Hl~RL~~Sa~~l~~~-~------------ 111 (365)
T 2a1h_A 46 KGWGQPRIQ-PFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLP-S------------ 111 (365)
T ss_dssp TEECCCEEE-ESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC-C------------
T ss_pred CeEECCEEe-EcccceeCccchhhhcCceeEeEEEEEecCCCceeecCHHHHHHHHHHHHHHhCCC-C------------
Confidence 479999999 888899999877 49999999999965 225799999999999999999997 3
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhhhhhcCCCcceEEEEEEEecCCCCCCccCCCCCCCCcceeEEEEeec
Q 017872 80 EPIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVHFSG 159 (365)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~l~~li~~~~~~~l~~~l~~~~~~~~~~iri~vt~g~~~~~~~~~~g~~~~~~~~~~~v~~~~ 159 (365)
++.+.+.+.+.+++..+ ..++ . ...+..+|||++++++.+. +|..+. ..++++|.+.|
T Consensus 112 ---------~~~~~l~~~i~~lv~~~-~~~~----p-~~~g~~~yiR~~~~~~~~~------~g~~p~-~~~~~~i~~~p 169 (365)
T 2a1h_A 112 ---------FDKLELLECIRRLIEVD-KDWV----P-DAAGTSLYVRPVLIGNEPS------LGVSQP-RRALLFVILCP 169 (365)
T ss_dssp ---------CCHHHHHHHHHHHHHHT-GGGS----C-CSTTCEEEEEEEEEECCBC------CSCSCC-SEEEEEEEEEE
T ss_pred ---------CCHHHHHHHHHHHHHhc-cccC----C-CCCCceEEEEEEEEecCCc------cCCCCC-CCcEEEEEEEE
Confidence 23455555566555321 0000 0 0122468999999988643 244333 46889999999
Q ss_pred CCCccccccCCCcEEEEecc-cccCC----cccc-cchhhcHHHHHHhCCCCCcEEEEe-C-CCCeEEecCcceEEEEEc
Q 017872 160 YVPFVFGVEGTGARLALVGR-GRDVA----EAKY-SDWVRLRKPLEKLRPPSVTELLLS-N-DGDQLLEGSITNFFVVCR 231 (365)
Q Consensus 160 ~~~~~~~~~~~Gv~l~~~~~-~r~~~----~~K~-~~~~~~~~~l~~a~~~g~de~lL~-~-~gg~v~Egs~sN~F~v~~ 231 (365)
++++....+.+|+++.++.. .|..+ .+|+ .||........+|+++|+||+|+. + +| +|+|++++|||+|++
T Consensus 170 ~~~~~~~g~~~~v~l~~~~~~~R~~~~~~~~~Kt~~ny~~~~la~~eA~~~G~de~L~l~d~~G-~V~E~~~sNif~v~~ 248 (365)
T 2a1h_A 170 VGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGPDH-QLTEVGTMNIFVYWT 248 (365)
T ss_dssp ECCSSSSSSCCCEEEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEETTTT-EEEEETTEEEEEEEE
T ss_pred CccccccccccceEEEEccccccCCCCccchhchhhccHHHHHHHHHHHHcCCCeEEEEECCCC-eEEEcCceEEEEEEe
Confidence 87654222235799988874 66544 7897 888665555667889999999644 5 66 999999999999974
Q ss_pred ---CCCCcchhhhhhccCCCCceEEEecCCCCCccccHHHHHHHHHHHhC-CCCEEEEecCHHHHhhh------ceeeee
Q 017872 232 ---KDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSK-GIPIRELASSWSQHELW------KEAFIT 301 (365)
Q Consensus 232 ---~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giLpGItR~~vle~a~~~-gi~v~E~~i~~~eL~~a------dEvFlt 301 (365)
|+ .+|+|||+++++||||||+.||++|+++ |++|+|+.++++||..| ||+|+|
T Consensus 249 ~~dg~-----------------~~l~TP~l~~~iL~GITR~~vl~la~~~~G~~v~Er~i~~~eL~~A~~~g~~dEvf~t 311 (365)
T 2a1h_A 249 HEDGV-----------------LELVTPPLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGS 311 (365)
T ss_dssp CTTSC-----------------EEEEECCCSSSSCCCHHHHHHHHHHHHHTSSEEEECCCBHHHHHHHHHTTCEEEEEEE
T ss_pred cCCCc-----------------EEEEeCCCCCCccccHHHHHHHHHHHhcCCCceEEEeCCHHHHHHHHhcCCccEEEEc
Confidence 31 1499999999999999999999999994 99999999999999999 999999
Q ss_pred ecccceEEEEEEc--CCccccccccccccccccccccc-CCCccHHHHHHHHHHHHHHhcc
Q 017872 302 SSLRVLQHVESIQ--VPKTWELQESDCWNDIAWEQKLF-EGGPGMITKTIQEEIMERAGLG 359 (365)
Q Consensus 302 nS~~gi~PV~~i~--~~~~~~~~~~~~~~~~~~~~~~~-~g~~G~vt~~L~~~~~~~~~~~ 359 (365)
||+++|+||.+|+ + +. ..+. +|.+||+|++|+++|.+++...
T Consensus 312 nt~~~i~PV~~i~~~~---------~~-------~~~~~~g~~g~vt~~L~~~~~~~~~g~ 356 (365)
T 2a1h_A 312 GTACQVCPVHRILYKD---------RN-------LHIPTMENGPELILRFQKELKEIQYGI 356 (365)
T ss_dssp ETTTEEEEEEEEEETT---------EE-------EECTTGGGTTHHHHHHHHHHHHHHTTS
T ss_pred CCeeEEEEEEEEEeCC---------eE-------EeeCCCCCcCHHHHHHHHHHHHHHcCC
Confidence 9999999999999 5 11 0122 4678999999999999987653
No 13
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8}
Probab=100.00 E-value=1.4e-47 Score=368.15 Aligned_cols=253 Identities=22% Similarity=0.222 Sum_probs=205.6
Q ss_pred EECCeeecCCCCCcccccccC-CCeEEEEEEEEcCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCC
Q 017872 8 FSNGVVSQASDTPSVSTFLQE-RRGAYTTTRTHNNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLEPIRTPS 86 (365)
Q Consensus 8 ~~nG~~~~~~~~~~is~~~~~-G~GvFEt~r~~~g~~~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~~~~~~~ 86 (365)
|.+|+++ +...+.++++|++ |+|+|||||+++| ++|+|++|++||.+||+.|+|+.|
T Consensus 18 ~~~~~~~-~~~~~~i~~~d~g~G~gvFEtir~~~G--~~~~l~~Hl~RL~~Sa~~l~~~~p------------------- 75 (285)
T 3csw_A 18 RGKFRRA-DEISLDFSLFEKSLQGAVYETLRTYSR--APFAAYKHYTRLKRSADFFNLPLS------------------- 75 (285)
T ss_dssp TTEEEES-SEEEEEHHHHHHHTTCCEEEEEEEETT--EETTHHHHHHHHHHHHHTTTCCCS-------------------
T ss_pred ccCceEc-ccccCEeCCcccccceeeEEEEEEECC--EECCHHHHHHHHHHHHHHhCCCCC-------------------
Confidence 5688888 7777889988875 8999999999999 899999999999999999999755
Q ss_pred CCCchhHHHHHHHHHHHHHhhhhhhhhhhhcCCCcceEEEEEEEecCCCCCCccCCCCCCCCcceeEEEEeecCCCcccc
Q 017872 87 SSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVHFSGYVPFVFG 166 (365)
Q Consensus 87 ~~~~~~~~~~~l~~li~~~~~~~l~~~l~~~~~~~~~~iri~vt~g~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~~~~ 166 (365)
++.+.+.+.+.+++ +.++ .+++||+++...+ .+++|.+.|++++.
T Consensus 76 --~~~~~l~~~i~~~~-------------~~~~-~~~~iR~~v~~~~-----------------~~~~i~~~p~~~~~-- 120 (285)
T 3csw_A 76 --LSFDEFTKVLKAGA-------------DEFK-QEVRIKVYLFPDS-----------------GEVLFVFSPLNIPD-- 120 (285)
T ss_dssp --SCHHHHHHHHHHHH-------------TTCS-SCEEEEEEECTTT-----------------CCEEEEEEECCCCC--
T ss_pred --CCHHHHHHHHHHHH-------------HhhC-CCeEEEEEEEcCC-----------------CEEEEEEEeCCCcc--
Confidence 22333334344333 1333 6799999993211 15677888887643
Q ss_pred ccCCCcEEEEeccccc-----CCcccccchhhcHHHHHHhCCCCCcEEEEeC-CCCeEEecCcceEEEEEcCCCCcchhh
Q 017872 167 VEGTGARLALVGRGRD-----VAEAKYSDWVRLRKPLEKLRPPSVTELLLSN-DGDQLLEGSITNFFVVCRKDNSEAEDK 240 (365)
Q Consensus 167 ~~~~Gv~l~~~~~~r~-----~~~~K~~~~~~~~~~l~~a~~~g~de~lL~~-~gg~v~Egs~sN~F~v~~~~~~~~~~~ 240 (365)
+..|+++.++..+|. .+.+|+.+| +.+.+++.+...+||+|+.+ +| +|+||+++|||++++|+
T Consensus 121 -~~~~~~l~~~~~~~~~~~~~~~~~Kt~~~--l~~~la~~~A~~~de~L~ld~~G-~V~Egs~sNif~v~~g~------- 189 (285)
T 3csw_A 121 -LETGVEVKISNVRRIPDLSTPPALKITGR--TDIVLARREIVDCYDVILLGLNG-QVCEGSFSNVFLVKEGK------- 189 (285)
T ss_dssp -CTTCEEEEECSSCCCCTTTSCTTCCBTTC--HHHHHHHTTCSSSSEEEEECTTS-BEEEESSSEEEEEETTE-------
T ss_pred -ccCCeEEEEEeEEecCCCCCCCccchhcc--HHHHHHHHHHHhCCeEEEECCCC-cEEEcCceEEEEEECCE-------
Confidence 256899988876653 247899886 55666653322399997655 66 99999999999999997
Q ss_pred hhhccCCCCceEEEecCCCCCccccHHHHHHHHHHHhCCCCEEEEecCHHHHhhhceeeeeecccceEEEEEEcCCcccc
Q 017872 241 FLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSSLRVLQHVESIQVPKTWE 320 (365)
Q Consensus 241 ~~~~~~~~~~~~l~TPpl~~giLpGItR~~vle~a~~~gi~v~E~~i~~~eL~~adEvFltnS~~gi~PV~~i~~~~~~~ 320 (365)
|+|||+++++||||||+.||++|+++|++|+|+.++++||..|||+|+|||++||+||.+|++
T Consensus 190 ------------l~TP~l~~~iL~GitR~~ll~~a~~~g~~v~E~~i~~~dL~~adevfltns~~gv~PV~~id~----- 252 (285)
T 3csw_A 190 ------------LITPSLDSGILDGITRENVIKLAKSLEIPVEERVVWVWELFEADEMFLTHTSAGVVPVRRLNE----- 252 (285)
T ss_dssp ------------EEEECGGGTCCCCHHHHHHHHHHHHTTCCEEEECCBHHHHHTCSEEEEEETTTEEEEEEEETT-----
T ss_pred ------------EEeCCCCCCccCCHHHHHHHHHHHHCCCeEEEEeCCHHHHhhCCEEEEecCcceEEEEEEECC-----
Confidence 999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cccccccccccccccccCCCccHHHHHHHHHHHHHHhc
Q 017872 321 LQESDCWNDIAWEQKLFEGGPGMITKTIQEEIMERAGL 358 (365)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~g~~G~vt~~L~~~~~~~~~~ 358 (365)
..+.+|.+||+|++|+++|.+.+..
T Consensus 253 -------------~~~~~g~~g~~t~~L~~~~~~~~~~ 277 (285)
T 3csw_A 253 -------------HSFFEEEPGPVTATLMENFEPFVLN 277 (285)
T ss_dssp -------------EESCSSSCCHHHHHHHHHHHHHHHT
T ss_pred -------------EECCCCCCCHHHHHHHHHHHHHHhC
Confidence 2456678999999999999998765
No 14
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A*
Probab=100.00 E-value=1.9e-47 Score=378.17 Aligned_cols=282 Identities=16% Similarity=0.188 Sum_probs=217.8
Q ss_pred EECCeeecCCCCCccccccc---CCCeEEEEEEEEc---CcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCC
Q 017872 8 FSNGVVSQASDTPSVSTFLQ---ERRGAYTTTRTHN---NGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLEP 81 (365)
Q Consensus 8 ~~nG~~~~~~~~~~is~~~~---~G~GvFEt~r~~~---g~~~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~~ 81 (365)
|+||+++ +.+++.++++|+ +|||||||||+|+ |+.++|+|++|++||.+||++|+|+ |
T Consensus 49 w~ng~i~-p~~~~~i~~~d~gl~yGdgvFE~ir~y~~~dG~i~lfrl~~Hl~RL~~Sa~~L~ip-~-------------- 112 (358)
T 3uzo_A 49 WDAGTLT-EDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPDQNAARMRMSCRRLLMP-E-------------- 112 (358)
T ss_dssp ECCCEEE-SCCEEEEETTCHHHHSCCEEECCEEEEECTTSCEEECCHHHHHHHHHHHHHHTTCC-C--------------
T ss_pred EECCEEe-EcccceeChHHcceecCcEEEEEEEEEECCCCcEeecCHHHHHHHHHHHHHHhCCC-C--------------
Confidence 8999999 888899998887 4999999999995 4234899999999999999999997 4
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhhhhhhhhhhhcCCCcceEEEEEEEecCCCCCCccCCCCCCCCcceeEEEEeecCC
Q 017872 82 IRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVHFSGYV 161 (365)
Q Consensus 82 ~~~~~~~~~~~~~~~~l~~li~~~~~~~l~~~l~~~~~~~~~~iri~vt~g~~~~~~~~~~g~~~~~~~~~~~v~~~~~~ 161 (365)
++.+.+.+.+++++..+ ..++ .......++|||++++++.+. +|..+. ..+.++|.+.|.+
T Consensus 113 -------~~~e~l~~~i~~lv~~n-~~~v----p~~~~~~~~yiR~~v~~~~~~------~G~~p~-~~~~~~i~~~P~~ 173 (358)
T 3uzo_A 113 -------LSDEQFIDACLQVVRAN-EHFL----PPYGTGGSLYLRPFVIGVGDN------IGVRTA-PEFIFSVFCVPVG 173 (358)
T ss_dssp -------CCHHHHHHHHHHHHHHT-GGGS----CCTTSCCEEEEEEEEEEESSC------CSSSCC-SEEEEEEEEEEEC
T ss_pred -------CCHHHHHHHHHHHHHHc-CCcC----CCCCCCceEEEEEEEEecCCc------cccCCC-CCeEEEEEEecCh
Confidence 23555666666666422 0000 000123579999999988653 344332 3577888888876
Q ss_pred CccccccCCCcEEEEecccccCC----ccc-ccchhhcHHHHHHhCCCCCcEEE-EeCC--CCeEEecCcceEEEEEc-C
Q 017872 162 PFVFGVEGTGARLALVGRGRDVA----EAK-YSDWVRLRKPLEKLRPPSVTELL-LSND--GDQLLEGSITNFFVVCR-K 232 (365)
Q Consensus 162 ~~~~~~~~~Gv~l~~~~~~r~~~----~~K-~~~~~~~~~~l~~a~~~g~de~l-L~~~--gg~v~Egs~sN~F~v~~-~ 232 (365)
++... -.+|+++.++++.|..+ .+| +.||.....+..+|+++|+||+| ||.+ | +|+|++++|||+|++ |
T Consensus 174 ~~~~~-g~~~v~l~~~~~~R~~p~~~~~~K~~~NYl~~vla~~eA~~~G~~e~l~ld~~~~g-~V~E~~~sNif~v~~dg 251 (358)
T 3uzo_A 174 PYFKG-GLTPTNFITSDYDRAAPHGTGAAKVGGNYAASLLPGYEAKKRDFADVIYLDPATHT-TIEEAGAANFFAITQDG 251 (358)
T ss_dssp CSSCS-SSCCEEEECCSCCSSCTTSSTTSCBHHHHHHHHHHHHHHHHTTCSEECCBCTTTSC-BBCBCSSSEEEEEETTS
T ss_pred hhhhc-CCccEEEEEEeeeccCCCccccccchhhhHHHHHHHHHHHHcCCCEEEEEeCCCCC-eEEEcCCeeEEEEECCC
Confidence 54311 13468898888888766 589 47886555555578899999997 5544 5 999999999999974 4
Q ss_pred CCCcchhhhhhccCCCCceEEEecCCCCCccccHHHHHHHHHHHh-CCCCEEEEecCHHHHhhhceeeeeecccceEEEE
Q 017872 233 DNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRS-KGIPIRELASSWSQHELWKEAFITSSLRVLQHVE 311 (365)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~l~TPpl~~giLpGItR~~vle~a~~-~gi~v~E~~i~~~eL~~adEvFltnS~~gi~PV~ 311 (365)
. +|+||| ++++||||||+.||++|++ +|++|+|+.++++||..|||+|+|||+.+|+||.
T Consensus 252 ~------------------~l~TP~-~~~iL~GItR~~vl~la~~~~g~~v~e~~i~~~eL~~adEvf~t~t~~~i~PV~ 312 (358)
T 3uzo_A 252 Q------------------KFVTPQ-SPSILPSITKYSLLWLAEHRLGLEVEEGDIRIDELGKFSEAGACGTAAVITPIG 312 (358)
T ss_dssp C------------------EEEEEC-CTTSCCCHHHHHHHHHHHHTTCCEEEEECCBTTCGGGEEEEEEECTTTSSEEEE
T ss_pred e------------------EEEECC-cCCcccCHHHHHHHHHHHhhcCCeEEEEECCHHHHHhhcceeEEcCcceEEEEE
Confidence 3 499999 8899999999999999999 9999999999999999999999999999999999
Q ss_pred EEcCCcccccccccccccccccccccC-CCccHHHHHHHHHHHHHHhcc
Q 017872 312 SIQVPKTWELQESDCWNDIAWEQKLFE-GGPGMITKTIQEEIMERAGLG 359 (365)
Q Consensus 312 ~i~~~~~~~~~~~~~~~~~~~~~~~~~-g~~G~vt~~L~~~~~~~~~~~ 359 (365)
+|++.. + +..+.+ +.+||+|++|+++|.+++...
T Consensus 313 ~Id~~~-------~-------~~~i~~~~~~Gpvt~~L~~~~~~iq~g~ 347 (358)
T 3uzo_A 313 GIQHGD-------D-------FHVFYSESEPGPVTRRLYDELVGIQYGD 347 (358)
T ss_dssp EEEETT-------E-------EEESSCSSSCCHHHHHHHHHHHHHHTTS
T ss_pred EECccc-------c-------eeEeCCCCCcCHHHHHHHHHHHHHHcCC
Confidence 999810 0 002322 459999999999999987654
No 15
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A*
Probab=100.00 E-value=1.9e-46 Score=374.44 Aligned_cols=283 Identities=14% Similarity=0.071 Sum_probs=219.3
Q ss_pred EEEECCeeecCCCCCccccccc---CCCeEEEEEEEEcC---cccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCC
Q 017872 6 IVFSNGVVSQASDTPSVSTFLQ---ERRGAYTTTRTHNN---GSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGL 79 (365)
Q Consensus 6 ~~~~nG~~~~~~~~~~is~~~~---~G~GvFEt~r~~~g---~~~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~ 79 (365)
.+|+||+++ +.+++.+++.|+ +|+|+|||||+|+| +.++|+|++|++||.+||++|+|+ |
T Consensus 66 ~~w~ng~~~-p~~~~~i~~~d~~l~yG~gvFEg~k~y~g~dg~i~~frld~H~~RL~~Sa~~l~~p-~------------ 131 (386)
T 2coi_A 66 FGWEKPHIK-PLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRMYRSAVRATLP-V------------ 131 (386)
T ss_dssp TEECCCEEE-ECCCEEECTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCC-C------------
T ss_pred cEEECCEEe-ecccCccCcccchhhcCceeEEEEEEEeCCCCceeecCHHHHHHHHHHHHHhcCCC-C------------
Confidence 469999999 888899998877 59999999999987 236999999999999999999997 3
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHhhhhhhhhhhhcCCCcceEEEEEEEecCCCCCCccCCCCCCCCcceeEEEEeec
Q 017872 80 EPIRTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVHFSG 159 (365)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~l~~li~~~~~~~l~~~l~~~~~~~~~~iri~vt~g~~~~~~~~~~g~~~~~~~~~~~v~~~~ 159 (365)
++.+.+.+.+.+++..+ ..++ . ...+..+|||++++++.+. +|..+. ..+.++|.+.|
T Consensus 132 ---------~~~e~~~~~i~~lv~~~-~~~v----p-~~~g~~~yiR~~~~~~~~~------~g~~p~-~~~~~~i~~~p 189 (386)
T 2coi_A 132 ---------FDKEELLECIQQLVKLD-QEWV----P-YSTSASLYIRPTFIGTEPS------LGVKKP-TKALLFVLLSP 189 (386)
T ss_dssp ---------CCHHHHHHHHHHHHHHT-GGGS----C-SSSSCEEEEEEEEEECCCS------CSCSCC-SEEEEEEEEEE
T ss_pred ---------CCHHHHHHHHHHHHHhc-cccC----C-CCCCccEEEEEEEEecCCc------cccCCC-CCcEEEEEEEE
Confidence 23445555566555321 0001 0 1123578999999976542 244333 46889999999
Q ss_pred CCCccccccCCCcEEEEecc-cccCC----cccc-cchhhcHHHHHHhCCCCCcEEE-Ee-CCCCeEEecCcceEEEEE-
Q 017872 160 YVPFVFGVEGTGARLALVGR-GRDVA----EAKY-SDWVRLRKPLEKLRPPSVTELL-LS-NDGDQLLEGSITNFFVVC- 230 (365)
Q Consensus 160 ~~~~~~~~~~~Gv~l~~~~~-~r~~~----~~K~-~~~~~~~~~l~~a~~~g~de~l-L~-~~gg~v~Egs~sN~F~v~- 230 (365)
++++....+.+|+++.+++. .|..+ .+|+ .||........+|+++|+||+| || .+| +|+|++++|||+|+
T Consensus 190 ~~~y~~~~~~~~v~l~~~~~~~r~~p~~~g~~K~~~Ny~~~~la~~eA~~~G~de~L~ld~~~g-~V~E~~~sNiF~v~~ 268 (386)
T 2coi_A 190 VGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDNGCQQVLWLYGEDH-QITEVGTMNLFLYWI 268 (386)
T ss_dssp ECCCC-----CCEEEEECTTCCSCCTTSSTTSCCTHHHHTTHHHHHHHHTTTCSEEEEEETTTT-EEEEETTEEEEEEEE
T ss_pred CcccccccccccEEEEEcccccccCCCcccccccccChHHHHHHHHHHHHcCCCEEEEEECCCC-EEEEeCCceEEEEEE
Confidence 87754322236899988875 46544 5897 6887666666678899999996 66 477 99999999999997
Q ss_pred --cCCCCcchhhhhhccCCCCceEEEecCCCCCccccHHHHHHHHHHHh-CCCCEEEEecCHHHHhhh------ceeeee
Q 017872 231 --RKDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRS-KGIPIRELASSWSQHELW------KEAFIT 301 (365)
Q Consensus 231 --~~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giLpGItR~~vle~a~~-~gi~v~E~~i~~~eL~~a------dEvFlt 301 (365)
+| ..+|+|||++.++||||||+.||++|++ +|++|+|+.++++||.+| ||+|+|
T Consensus 269 ~~~g-----------------~~~l~TP~l~~~iL~GITR~~vl~la~~~~G~~V~Er~i~~~eL~~A~~~g~~dEvF~t 331 (386)
T 2coi_A 269 NEDG-----------------EEELATPPLDGIILPGVTRRCILDLAHQWGEFKVSERYLTMDDLTTALEGNRVREMFGS 331 (386)
T ss_dssp CTTS-----------------CEEEEECCCSSSSCCCHHHHHHHHHHHHHCSSEEEECCCBHHHHHHHHTTTCEEEEEEE
T ss_pred cCCC-----------------CEEEEECCCCCCccHHHHHHHHHHHHHhccCCcEEEEECCHHHHHHHHhcCCccEEEEe
Confidence 55 1129999999999999999999999999 899999999999999999 999999
Q ss_pred ecccceEEEEEEc--CCccccccccccccccccccccc-CCCccHHHHHHHHHHHHHHhc
Q 017872 302 SSLRVLQHVESIQ--VPKTWELQESDCWNDIAWEQKLF-EGGPGMITKTIQEEIMERAGL 358 (365)
Q Consensus 302 nS~~gi~PV~~i~--~~~~~~~~~~~~~~~~~~~~~~~-~g~~G~vt~~L~~~~~~~~~~ 358 (365)
||+.+|+||.+|+ + +.+ .+. +|.+||+|++|+++|.++...
T Consensus 332 gTa~~i~PV~~I~~~~---------~~~-------~~~~~g~~g~vt~~L~~~l~~iq~g 375 (386)
T 2coi_A 332 GTACVVCPVSDILYKG---------ETI-------HIPTMENGPKLASRILSKLTDIQYG 375 (386)
T ss_dssp ETTTEEEEEEEEEESS---------SEE-------ECGGGGGTTHHHHHHHHHHHHHHTT
T ss_pred cceeEEEEEEEEeeCC---------eEE-------ecCCCCCcCHHHHHHHHHHHHHhCC
Confidence 9999999999999 5 211 111 456899999999999998765
No 16
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus}
Probab=100.00 E-value=1.5e-43 Score=332.90 Aligned_cols=220 Identities=22% Similarity=0.203 Sum_probs=177.1
Q ss_pred EEECCeeecCCCCCccccccc---C-CCeEEEEEEEEcCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCC
Q 017872 7 VFSNGVVSQASDTPSVSTFLQ---E-RRGAYTTTRTHNNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLEPI 82 (365)
Q Consensus 7 ~~~nG~~~~~~~~~~is~~~~---~-G~GvFEt~r~~~g~~~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~~~ 82 (365)
+|+||+.. . +++|+ + |+|+|||||+++| ++|+|++|++||.+||+.|+|+.|
T Consensus 2 ~~~nG~~~-~------~~~d~g~~y~G~gvFEtir~~~G--~~~~l~~Hl~RL~~Sa~~l~~~~p--------------- 57 (246)
T 2zgi_A 2 RLLNGTPL-A------LALPEAFLYHGASVFTTLRAEGG--RPLWLEEHLARLRRHALALGLSYP--------------- 57 (246)
T ss_dssp EEETTEEC-C------CSSCHHHHHSCCCEEEEEEEETT--EETTHHHHHHHHHHHHHHTTCCCC---------------
T ss_pred EEECCccc-C------CCccCcccccCeeEEEEEEEECC--EeCCHHHHHHHHHHHHHHhCCCCC---------------
Confidence 79999976 2 44555 5 9999999999998 899999999999999999999755
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhhhhhhhhhhhcC-CCcceEEEEEEEecCCCCCCccCCCCCCCCcceeEEEEeecCC
Q 017872 83 RTPSSSSSLSMWESMIKSLVNDSMNEALPIALKERR-DGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVHFSGYV 161 (365)
Q Consensus 83 ~~~~~~~~~~~~~~~l~~li~~~~~~~l~~~l~~~~-~~~~~~iri~vt~g~~~~~~~~~~g~~~~~~~~~~~v~~~~~~ 161 (365)
+ + +.+.+.+.+.+ +.+ +..+++||+++++|.+. +...|++
T Consensus 58 ------~----~-~~l~~~i~~~~---------~~~~~~~~~~vR~~v~~g~~~-------------------~~~~p~~ 98 (246)
T 2zgi_A 58 ------G----D-EAFLEDLEALL---------RAFPKAPCLRLRFTVGEGVRL-------------------SEARPYA 98 (246)
T ss_dssp ------C----H-HHHHHHHHHHT---------TSCTTCSEEEEEEEEETTEEE-------------------EEEEECC
T ss_pred ------C----H-HHHHHHHHHHH---------HhcCCCCCEEEEEEEECCCCc-------------------cCcCcCC
Confidence 1 3 44555554221 233 45789999999987531 1113444
Q ss_pred CccccccCCCcEEEEecccccCC---cccccchhhcHHHHHHhCCCCCcEEEEeC-CCCeEEecCcceEEEEEcCCCCcc
Q 017872 162 PFVFGVEGTGARLALVGRGRDVA---EAKYSDWVRLRKPLEKLRPPSVTELLLSN-DGDQLLEGSITNFFVVCRKDNSEA 237 (365)
Q Consensus 162 ~~~~~~~~~Gv~l~~~~~~r~~~---~~K~~~~~~~~~~l~~a~~~g~de~lL~~-~gg~v~Egs~sN~F~v~~~~~~~~ 237 (365)
+.+..++..|+++.+++. |..+ .+|+.||........+|+++|+||+|+.+ +| +|+||+++|||++++++
T Consensus 99 ~~~~~~~~~g~~l~~~~~-r~~~~~~~~Kt~n~~~~~~a~~~A~~~g~de~l~ld~~G-~v~Egs~sNif~v~~g~---- 172 (246)
T 2zgi_A 99 PLPLSLYREGVRVRLTGY-RVHPDLARYKTGNYLPYRLALEEARKEGAFEGLLLDAFG-HVVDGSRTSPLLFREGT---- 172 (246)
T ss_dssp CCCTHHHHHCBCEEEEEE-ECCTTTTTSCBSCCHHHHHHHHHHHTTTCSEEEEECTTS-CEEEESSSEEEEEETTE----
T ss_pred CCchhHhhcCeEEEEecc-cCCCCCccchhhhhHHHHHHHHHHHHcCCCEEEEECCCC-CEEEcCCeEEEEEECCE----
Confidence 333334456899988887 6554 69998875444445568899999997655 66 99999999999999997
Q ss_pred hhhhhhccCCCCceEEEecCCCCCccccHHHHHHHHHHHhCCCCEEEEecCHHHHhhhceeeeeecccceEEEEEEcC
Q 017872 238 EDKFLQTCNNSHSFEVQTAPISDGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSSLRVLQHVESIQV 315 (365)
Q Consensus 238 ~~~~~~~~~~~~~~~l~TPpl~~giLpGItR~~vle~a~~~gi~v~E~~i~~~eL~~adEvFltnS~~gi~PV~~i~~ 315 (365)
|+|| +++||||||+.||++|+++|++|+|+.++++||.. |+|+|||++||+||++||+
T Consensus 173 ---------------l~TP---~~iL~GitR~~ll~~a~~~g~~v~E~~i~~~dL~~--evfltns~~gi~pV~~id~ 230 (246)
T 2zgi_A 173 ---------------LYLL---EGGLEGITREKVAEAARGLGLRVERGLFRPEGLRG--HLLLAGSGVGLLPVRPPPP 230 (246)
T ss_dssp ---------------EEEE---CSSCCCHHHHHHHHHHHHTTCEEEEECCCGGGCCS--EEEEEETTTEEEEBSSCCG
T ss_pred ---------------EECC---CCccCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHh--hHeeecChhheEEEEEECh
Confidence 9999 78999999999999999999999999999999998 9999999999999999997
No 17
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti}
Probab=100.00 E-value=6.7e-40 Score=304.07 Aligned_cols=200 Identities=24% Similarity=0.272 Sum_probs=163.8
Q ss_pred CCCeEEEEEEEE-cCcccccCHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHh
Q 017872 28 ERRGAYTTTRTH-NNGSCLLFWERHLRRLASSARILYNSSPNLLFKSPTPSGLEPIRTPSSSSSLSMWESMIKSLVNDSM 106 (365)
Q Consensus 28 ~G~GvFEt~r~~-~g~~~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~~ 106 (365)
.|+|+|||||++ +| ++|+|++|++||.+||+.|+|+.+ . +++.+.+.+.
T Consensus 14 ~g~glFEtir~~~~G--~~~~l~~Hl~RL~~Sa~~l~~~~~-----------------------~----~~l~~~i~~~- 63 (221)
T 3qqm_A 14 ADFELIETMRWQPGT--SFLRFDRHLARLYGSAAELGFACD-----------------------P----QRIAEVLSDA- 63 (221)
T ss_dssp SCCEEEEEEEEETTT--EETTHHHHHHHHHHHHHHHTCCCC-----------------------H----HHHHHHHHHH-
T ss_pred CCCEEEEEEEEecCC--cCcCHHHHHHHHHHHHHHcCCCCC-----------------------H----HHHHHHHHHH-
Confidence 389999999999 88 899999999999999999999632 2 3344444321
Q ss_pred hhhhhhhhhhcCCCcceEEEEEEEecCCCCCCccCCCCCCCCcceeEEEEeecCCCccccccCCCcEEEEeccccc----
Q 017872 107 NEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVHFSGYVPFVFGVEGTGARLALVGRGRD---- 182 (365)
Q Consensus 107 ~~~l~~~l~~~~~~~~~~iri~vt~g~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~~~~~~~~Gv~l~~~~~~r~---- 182 (365)
+ .+...+++||+++++++ .+.+.+.|+++.+ ...|+++.+++.+|.
T Consensus 64 -------~--~~~~~~~~iR~~~~~~g------------------~~~i~~~p~~~~~---~~~~~~l~~~~~~~~~~~~ 113 (221)
T 3qqm_A 64 -------L--DGARTAMRTRLALARNG------------------DATASAQPYEPLA---ADKVWILRLARTRLDSQNT 113 (221)
T ss_dssp -------H--TTCCSCEEEEEEEETTS------------------CEEEEEEECCCCC---TTCCEEEEECSCCBCTTCG
T ss_pred -------H--hcCCCCEEEEEEEEcCC------------------CEEEEEEcCCCCC---CCCCEEEEEeeeEecCCCc
Confidence 1 13456899999999864 2456777887653 246899999987764
Q ss_pred CCcccccchhhcHHHHHHhCCCCCcEEEEeC-CCCeEEecCcceEEEEEc-CCCCcchhhhhhccCCCCceEEEecCCCC
Q 017872 183 VAEAKYSDWVRLRKPLEKLRPPSVTELLLSN-DGDQLLEGSITNFFVVCR-KDNSEAEDKFLQTCNNSHSFEVQTAPISD 260 (365)
Q Consensus 183 ~~~~K~~~~~~~~~~l~~a~~~g~de~lL~~-~gg~v~Egs~sN~F~v~~-~~~~~~~~~~~~~~~~~~~~~l~TPpl~~ 260 (365)
...+|+.||.......++|+++|+||+|+.+ +| +|+||+++|||++++ ++ |+|||++.
T Consensus 114 ~~~~Kt~nr~~~~~a~~~a~~~g~~e~l~l~~~g-~v~E~s~sNif~~~~~~~-------------------l~TP~~~~ 173 (221)
T 3qqm_A 114 LLRHKTSRRQLYTHARSEYLVTQADEVLLANERG-EICEGTITNVFADFGDGV-------------------LATPRLDC 173 (221)
T ss_dssp GGGSCBSCCHHHHHHHHTSCTTTCSEEEEEBTTS-CEEEESSCEEEEECSSSC-------------------EEEECGGG
T ss_pred chhchhcchHHHHHHHHHHHhcCCcEEEEECCCC-eEEEcCceeEEEEeCCCE-------------------EECCCCcc
Confidence 3468998886555555567789999997555 77 999999999999998 77 99999999
Q ss_pred CccccHHHHHHHHHHHhCCCCEEEEecCHHHHhhhceeeeeecccceEEEEE
Q 017872 261 GVLPGVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSSLRVLQHVES 312 (365)
Q Consensus 261 giLpGItR~~vle~a~~~gi~v~E~~i~~~eL~~adEvFltnS~~gi~PV~~ 312 (365)
++|+||||+.||+++ +|+|+.++++||..|||+|+|||++||+||+-
T Consensus 174 ~~L~GitR~~ll~~~-----~v~e~~i~~~~L~~adevf~~ns~~gi~pV~l 220 (221)
T 3qqm_A 174 GLLPGVLRAELLDEG-----RAEEAIYSYDDLKSAKALFVGNSLRGLIPAKL 220 (221)
T ss_dssp TCCCCHHHHHHHHTT-----SEEEECCCHHHHTTCSEEEEEETTTEEEEEEE
T ss_pred CcchHHHHHHHHhhC-----cEEEEeCCHHHHHhCCEEEEEecceeEEEEEE
Confidence 999999999999975 89999999999999999999999999999974
No 18
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus}
Probab=100.00 E-value=1.5e-36 Score=275.41 Aligned_cols=189 Identities=13% Similarity=0.040 Sum_probs=143.0
Q ss_pred CCCeEEEEEEEEcCcccccCHHHHHHHHHHHH-HHhcCC--CCCCCCCCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Q 017872 28 ERRGAYTTTRTHNNGSCLLFWERHLRRLASSA-RILYNS--SPNLLFKSPTPSGLEPIRTPSSSSSLSMWESMIKSLVND 104 (365)
Q Consensus 28 ~G~GvFEt~r~~~g~~~~~~l~~Hl~RL~~Sa-~~L~i~--~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 104 (365)
+|+|+|||||+++| ++|+|++|++||.+|| +.|+|+ .| + +.+++.+.+.
T Consensus 3 ~g~~vfEt~r~~~g--~~~~l~~Hl~RL~~Sa~~~l~~~~~~~---------------------~----~~~~~~~~i~- 54 (194)
T 3ceb_A 3 WQFPLFETILIEQG--QAKNISYHQQRYEKSLLKFYPKMKLQP---------------------F----DLAKIIAKHT- 54 (194)
T ss_dssp TTCCEEEEEEEETT--EECSHHHHHHHHHHHHHHHSTTCCCCC---------------------C----CHHHHHHTCG-
T ss_pred CCCeEEEEEEEECC--EecCHHHHHHHHHHHHHHHhCCCCCCC---------------------C----CHHHHHHHHH-
Confidence 58999999999998 8999999999999999 999997 33 1 2344444332
Q ss_pred HhhhhhhhhhhhcCCCcceEEEEEEEecCCCCCCccCCCCCCCCcceeEEEEeecCCCccccccCCCcEEEEecccccCC
Q 017872 105 SMNEALPIALKERRDGEELAVTVLVSGDYGKLSGIENMGSDDFLGVFDVSVHFSGYVPFVFGVEGTGARLALVGRGRDVA 184 (365)
Q Consensus 105 ~~~~~l~~~l~~~~~~~~~~iri~vt~g~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~~~~~~~~Gv~l~~~~~~r~~~ 184 (365)
.+ +.++..+++||+++++|.. .+...|++|... .+.... ......+
T Consensus 55 ~~---------~~~~~~~~~iR~~~~~g~~-------------------~~~~~p~~~~~~----~~~~~~--~~~~~~~ 100 (194)
T 3ceb_A 55 AL---------FTHREGLIRCRIDYNHHDY-------------------VLQCFPYQQKVY----RTFKPV--FCDHIDY 100 (194)
T ss_dssp GG---------GSCSSSEEEEEEEECSSCE-------------------EEEEEEECCCCC----CCEEEE--ECSSCCC
T ss_pred HH---------hhCCCCCEEEEEEEeCCcc-------------------EEEEecCCCCcE----EEEEEe--cCCCcch
Confidence 11 2345578999999987631 122334433210 122211 1222356
Q ss_pred cccccchhhcHHHHHHhCCCCCcEEEEeCCCCeEEecCcceEEEEEcCCCCcchhhhhhccCCCCceEEEecCCCCCccc
Q 017872 185 EAKYSDWVRLRKPLEKLRPPSVTELLLSNDGDQLLEGSITNFFVVCRKDNSEAEDKFLQTCNNSHSFEVQTAPISDGVLP 264 (365)
Q Consensus 185 ~~K~~~~~~~~~~l~~a~~~g~de~lL~~~gg~v~Egs~sN~F~v~~~~~~~~~~~~~~~~~~~~~~~l~TPpl~~giLp 264 (365)
.+|+.||.. ....+|+++|+||+|+..+| +|+||+++|||++++++ |+||| +++||
T Consensus 101 ~~Kt~n~~~--~~~~~A~~~g~de~l~l~~G-~v~E~s~sNif~~~~g~-------------------l~TP~--~~~L~ 156 (194)
T 3ceb_A 101 SLKFSDRTL--LNNLLKQKEECDEIMIIRQG-KVTDCSIGNLIFRQNNQ-------------------WITPD--KPLLE 156 (194)
T ss_dssp SSCBSCCHH--HHHHHGGGTTSSEEEEEETT-EECCCSSSEEEEEETTE-------------------EEEES--SCSSC
T ss_pred hhcccCHHH--HHHHHHhhCCCCEEEEEeCC-EEEEeccEEEEEEECCE-------------------EECCC--CCCcC
Confidence 799988862 22334778999999755666 99999999999999997 99999 68999
Q ss_pred cHHHHHHHHHHHhCCCCEEEEecCHHHHhhhceeeeeecccce
Q 017872 265 GVIRQLVIEVCRSKGIPIRELASSWSQHELWKEAFITSSLRVL 307 (365)
Q Consensus 265 GItR~~vle~a~~~gi~v~E~~i~~~eL~~adEvFltnS~~gi 307 (365)
||||+.||+ +++|+|+.++++||..|||+|+|||++||
T Consensus 157 GitR~~ll~-----~~~v~e~~i~~~eL~~adevfl~ns~~gi 194 (194)
T 3ceb_A 157 GTQRAKLLE-----QKKIIAREIFFEDLAQYEEIRLINAMNGL 194 (194)
T ss_dssp CHHHHHHHH-----TTSSEEECCBGGGGGGCSCEEEEBTTBCC
T ss_pred hHHHHHHHc-----CCCEEEecCCHHHHhhccEEEEEecccCC
Confidence 999999998 58999999999999999999999999986
No 19
>3mcb_B Transcription factor BTF3; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens}
Probab=53.16 E-value=13 Score=26.80 Aligned_cols=28 Identities=18% Similarity=0.419 Sum_probs=21.2
Q ss_pred CCCcEE-EEeCCCCeEEec--------CcceEEEEEcC
Q 017872 204 PSVTEL-LLSNDGDQLLEG--------SITNFFVVCRK 232 (365)
Q Consensus 204 ~g~de~-lL~~~gg~v~Eg--------s~sN~F~v~~~ 232 (365)
.|.+|+ ++-+|| .|... ..+|-|+|.+.
T Consensus 5 ~gIeEVnmfk~dg-~vihF~nPkVqaS~~aNTfvv~G~ 41 (58)
T 3mcb_B 5 SGIEEVNMFTNQG-TVIHFNNPKVQASLAANTFTITGH 41 (58)
T ss_dssp CCCCEEEEEETTS-EEEEEESCEEEEETTTTEEEEESC
T ss_pred CCeeEEEEEecCC-EEEEecCcceEEeeccceEEEecC
Confidence 477888 676777 77665 45999999875
No 20
>3lkx_A Transcription factor BTF3; beta-barrel, chaperone; 2.50A {Homo sapiens}
Probab=48.08 E-value=15 Score=27.06 Aligned_cols=28 Identities=18% Similarity=0.419 Sum_probs=20.3
Q ss_pred CCCcEE-EEeCCCCeEEec--------CcceEEEEEcC
Q 017872 204 PSVTEL-LLSNDGDQLLEG--------SITNFFVVCRK 232 (365)
Q Consensus 204 ~g~de~-lL~~~gg~v~Eg--------s~sN~F~v~~~ 232 (365)
.|.+|+ ++-+|| .|... ..+|-|+|.+.
T Consensus 5 ~gIeEVnmfk~dg-~vihF~nPkVqaS~~aNT~vv~G~ 41 (66)
T 3lkx_A 5 SGIEEVNMFTNQG-TVIHFNNPKVQASLAANTFTITGH 41 (66)
T ss_dssp CCEEEEEEEETTS-EEEEEESCEEEEECC-CEEEEESC
T ss_pred CCeeEEEEEecCC-EEEEecCcceEEeeccCeeEecCC
Confidence 467888 666777 77766 56999999875
No 21
>4h5g_A Amino acid ABC superfamily ATP binding cassette transporter, binding protein; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: ARG; 1.78A {Streptococcus pneumoniae} PDB: 4h5f_A*
Probab=22.19 E-value=74 Score=27.30 Aligned_cols=35 Identities=11% Similarity=0.168 Sum_probs=30.8
Q ss_pred CCccccHHHHHHHHHHHhCCCCEEEEecCHHHHhh
Q 017872 260 DGVLPGVIRQLVIEVCRSKGIPIRELASSWSQHEL 294 (365)
Q Consensus 260 ~giLpGItR~~vle~a~~~gi~v~E~~i~~~eL~~ 294 (365)
.|-+.|+.-+.+-++|+++|++++-...+++++..
T Consensus 34 ~g~~~G~~vdl~~~ia~~lg~~~~~~~~~~~~~~~ 68 (243)
T 4h5g_A 34 KNQVVGADIDMAQAIADELGVKLEILSMSFDNVLT 68 (243)
T ss_dssp EEEEESHHHHHHHHHHHHHTSEEEEEECCGGGHHH
T ss_pred CCcEEEeHHHHHHHHHHHhCCceEEecccHHHHHH
Confidence 46788999999999999999999999999887654
Done!