Query 017874
Match_columns 364
No_of_seqs 186 out of 448
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 06:19:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017874.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017874hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2l6j_A TPR repeat-containing p 96.9 0.0018 6.2E-08 49.3 6.3 55 307-361 16-71 (111)
2 4gcn_A Protein STI-1; structur 96.9 0.0017 5.9E-08 52.7 6.1 55 307-361 20-75 (127)
3 2kc7_A BFR218_protein; tetratr 96.8 0.0028 9.7E-08 47.8 7.0 56 307-362 12-69 (99)
4 3rkv_A Putative peptidylprolyl 96.8 0.0036 1.2E-07 51.9 7.9 55 307-361 75-130 (162)
5 4gco_A Protein STI-1; structur 96.8 0.0029 9.8E-08 51.4 6.9 55 307-361 59-114 (126)
6 3gyz_A Chaperone protein IPGC; 96.7 0.0024 8.3E-08 54.3 6.5 56 307-362 82-138 (151)
7 3gyz_A Chaperone protein IPGC; 96.7 0.0032 1.1E-07 53.6 7.0 56 307-362 48-104 (151)
8 3k9i_A BH0479 protein; putativ 96.7 0.0039 1.3E-07 49.1 7.1 55 307-361 39-94 (117)
9 2xcb_A PCRH, regulatory protei 96.7 0.0034 1.2E-07 51.3 6.9 55 307-361 64-119 (142)
10 4gco_A Protein STI-1; structur 96.7 0.0039 1.3E-07 50.6 7.1 55 307-361 25-80 (126)
11 1hxi_A PEX5, peroxisome target 96.6 0.0043 1.5E-07 49.9 6.9 55 307-361 63-118 (121)
12 2vgx_A Chaperone SYCD; alterna 96.6 0.0045 1.5E-07 51.6 7.2 55 307-361 67-122 (148)
13 1na3_A Designed protein CTPR2; 96.6 0.0069 2.4E-07 44.3 7.1 55 307-361 21-76 (91)
14 3upv_A Heat shock protein STI1 96.5 0.0061 2.1E-07 48.1 7.2 52 307-358 50-102 (126)
15 3ma5_A Tetratricopeptide repea 96.5 0.0048 1.6E-07 47.7 6.3 54 307-360 19-73 (100)
16 4ga2_A E3 SUMO-protein ligase 96.5 0.0056 1.9E-07 50.9 7.1 55 307-361 43-98 (150)
17 3sz7_A HSC70 cochaperone (SGT) 96.5 0.0067 2.3E-07 50.4 7.4 56 307-362 57-113 (164)
18 3upv_A Heat shock protein STI1 96.4 0.0076 2.6E-07 47.5 7.2 55 307-361 16-71 (126)
19 2xcb_A PCRH, regulatory protei 96.4 0.007 2.4E-07 49.3 7.0 57 306-362 29-86 (142)
20 1hxi_A PEX5, peroxisome target 96.4 0.003 1E-07 50.8 4.4 55 307-361 29-84 (121)
21 2kck_A TPR repeat; tetratricop 96.4 0.0098 3.4E-07 44.5 7.0 55 307-361 52-110 (112)
22 2vgx_A Chaperone SYCD; alterna 96.3 0.0078 2.7E-07 50.1 7.0 56 307-362 33-89 (148)
23 2xev_A YBGF; tetratricopeptide 96.3 0.0092 3.2E-07 46.6 7.1 56 307-362 51-110 (129)
24 3sz7_A HSC70 cochaperone (SGT) 96.2 0.0094 3.2E-07 49.4 6.9 55 307-361 23-78 (164)
25 3vtx_A MAMA; tetratricopeptide 96.2 0.0056 1.9E-07 51.3 5.2 55 307-361 119-174 (184)
26 2dba_A Smooth muscle cell asso 96.1 0.025 8.4E-07 44.7 8.6 55 307-361 77-132 (148)
27 1elw_A TPR1-domain of HOP; HOP 96.1 0.016 5.5E-07 43.6 7.0 55 307-361 50-105 (118)
28 3q49_B STIP1 homology and U bo 96.1 0.015 5.2E-07 45.9 7.1 54 307-360 55-109 (137)
29 2xev_A YBGF; tetratricopeptide 96.1 0.015 5.3E-07 45.3 7.1 55 307-361 14-72 (129)
30 2hr2_A Hypothetical protein; a 96.0 0.0081 2.8E-07 52.5 5.6 55 307-361 69-135 (159)
31 3q49_B STIP1 homology and U bo 96.0 0.013 4.3E-07 46.3 6.3 55 307-361 21-76 (137)
32 2fbn_A 70 kDa peptidylprolyl i 96.0 0.028 9.7E-07 48.0 8.9 55 307-361 100-155 (198)
33 3urz_A Uncharacterized protein 96.0 0.025 8.5E-07 49.3 8.6 55 307-361 66-121 (208)
34 2lni_A Stress-induced-phosphop 95.9 0.021 7.3E-07 44.1 7.2 56 306-361 61-117 (133)
35 2kat_A Uncharacterized protein 95.8 0.021 7.2E-07 44.3 6.6 54 307-360 31-85 (115)
36 1p5q_A FKBP52, FK506-binding p 95.8 0.032 1.1E-06 52.9 9.0 54 308-361 209-263 (336)
37 3vtx_A MAMA; tetratricopeptide 95.7 0.023 7.8E-07 47.5 7.1 55 307-361 17-72 (184)
38 1elw_A TPR1-domain of HOP; HOP 95.7 0.022 7.4E-07 42.8 6.3 55 307-361 16-71 (118)
39 2pl2_A Hypothetical conserved 95.7 0.025 8.5E-07 49.6 7.4 56 307-362 17-73 (217)
40 2vyi_A SGTA protein; chaperone 95.7 0.032 1.1E-06 42.6 7.2 55 307-361 58-113 (131)
41 2lni_A Stress-induced-phosphop 95.6 0.022 7.6E-07 44.0 6.1 55 307-361 28-83 (133)
42 2kck_A TPR repeat; tetratricop 95.5 0.023 7.9E-07 42.3 5.6 54 307-360 18-72 (112)
43 2fo7_A Synthetic consensus TPR 95.5 0.039 1.4E-06 41.9 7.0 55 307-361 81-136 (136)
44 1na0_A Designed protein CTPR3; 95.4 0.043 1.5E-06 41.5 7.1 55 307-361 55-110 (125)
45 1a17_A Serine/threonine protei 95.4 0.04 1.4E-06 44.4 7.2 55 307-361 59-114 (166)
46 2dba_A Smooth muscle cell asso 95.4 0.057 2E-06 42.5 8.0 55 307-361 40-98 (148)
47 3k9i_A BH0479 protein; putativ 95.3 0.0087 3E-07 47.1 2.9 54 308-361 3-60 (117)
48 3qky_A Outer membrane assembly 95.3 0.035 1.2E-06 49.3 7.3 56 307-362 27-86 (261)
49 1kt0_A FKBP51, 51 kDa FK506-bi 95.3 0.034 1.2E-06 55.1 7.9 56 307-362 329-385 (457)
50 2vyi_A SGTA protein; chaperone 95.3 0.048 1.6E-06 41.5 7.1 55 307-361 24-79 (131)
51 2yhc_A BAMD, UPF0169 lipoprote 95.3 0.038 1.3E-06 48.5 7.1 56 307-362 16-75 (225)
52 1elr_A TPR2A-domain of HOP; HO 95.1 0.046 1.6E-06 41.8 6.3 55 307-361 16-71 (131)
53 1ihg_A Cyclophilin 40; ppiase 95.1 0.082 2.8E-06 51.1 9.5 55 307-361 285-340 (370)
54 1a17_A Serine/threonine protei 95.0 0.058 2E-06 43.4 7.1 55 307-361 25-80 (166)
55 3bee_A Putative YFRE protein; 95.0 0.046 1.6E-06 42.7 6.2 51 310-360 24-75 (93)
56 1na0_A Designed protein CTPR3; 95.0 0.072 2.5E-06 40.1 7.2 55 307-361 21-76 (125)
57 1hh8_A P67PHOX, NCF-2, neutrop 95.0 0.054 1.8E-06 46.0 7.1 55 307-361 49-104 (213)
58 3urz_A Uncharacterized protein 95.0 0.029 1E-06 48.8 5.4 56 306-361 15-87 (208)
59 4ga2_A E3 SUMO-protein ligase 94.9 0.015 5.3E-07 48.2 3.4 56 307-362 9-65 (150)
60 2kat_A Uncharacterized protein 94.9 0.038 1.3E-06 42.8 5.5 50 312-361 2-52 (115)
61 3as5_A MAMA; tetratricopeptide 94.9 0.065 2.2E-06 43.4 7.1 57 307-363 122-179 (186)
62 2if4_A ATFKBP42; FKBP-like, al 94.9 0.032 1.1E-06 53.0 5.8 56 307-362 242-298 (338)
63 4i17_A Hypothetical protein; T 94.8 0.054 1.9E-06 46.8 6.7 55 307-361 54-109 (228)
64 2e2e_A Formate-dependent nitri 94.4 0.076 2.6E-06 44.1 6.5 55 307-361 91-148 (177)
65 1elr_A TPR2A-domain of HOP; HO 94.4 0.068 2.3E-06 40.7 5.7 54 307-360 50-111 (131)
66 2c2l_A CHIP, carboxy terminus 94.3 0.084 2.9E-06 48.4 7.2 56 307-362 50-106 (281)
67 2fo7_A Synthetic consensus TPR 94.2 0.12 4E-06 39.2 6.8 55 307-361 47-102 (136)
68 2hr2_A Hypothetical protein; a 94.2 0.086 2.9E-06 45.9 6.5 51 307-357 23-86 (159)
69 3ieg_A DNAJ homolog subfamily 94.1 0.14 4.8E-06 46.1 8.1 55 307-361 284-339 (359)
70 2fbn_A 70 kDa peptidylprolyl i 94.1 0.13 4.5E-06 43.7 7.5 55 307-361 50-121 (198)
71 2pl2_A Hypothetical conserved 94.1 0.064 2.2E-06 46.9 5.5 56 307-362 51-118 (217)
72 1xnf_A Lipoprotein NLPI; TPR, 94.0 0.12 4E-06 45.2 7.1 55 307-361 89-144 (275)
73 2h6f_A Protein farnesyltransfe 93.9 0.088 3E-06 51.4 6.7 55 307-361 143-199 (382)
74 3rkv_A Putative peptidylprolyl 93.8 0.06 2.1E-06 44.3 4.7 55 307-361 23-96 (162)
75 1xnf_A Lipoprotein NLPI; TPR, 93.8 0.14 4.7E-06 44.7 7.3 56 307-362 55-111 (275)
76 2h6f_A Protein farnesyltransfe 93.8 0.042 1.4E-06 53.7 4.2 54 308-361 179-233 (382)
77 3qky_A Outer membrane assembly 93.8 0.091 3.1E-06 46.6 6.1 56 307-362 109-182 (261)
78 4gyw_A UDP-N-acetylglucosamine 93.6 0.13 4.4E-06 54.7 7.8 56 307-362 55-111 (723)
79 3uq3_A Heat shock protein STI1 93.6 0.16 5.4E-06 43.6 7.1 52 307-358 185-237 (258)
80 3as5_A MAMA; tetratricopeptide 93.5 0.19 6.4E-06 40.5 7.1 55 307-361 88-143 (186)
81 3mkr_A Coatomer subunit epsilo 93.5 0.11 3.7E-06 48.1 6.3 56 307-362 212-269 (291)
82 3uq3_A Heat shock protein STI1 93.5 0.17 5.8E-06 43.4 7.2 55 307-361 151-206 (258)
83 2vq2_A PILW, putative fimbrial 93.4 0.18 6.3E-06 42.2 7.1 52 308-359 126-178 (225)
84 2c2l_A CHIP, carboxy terminus 93.4 0.096 3.3E-06 48.0 5.7 55 307-361 16-71 (281)
85 1wao_1 Serine/threonine protei 93.4 0.21 7.3E-06 49.8 8.6 56 307-362 52-108 (477)
86 2e2e_A Formate-dependent nitri 93.2 0.16 5.3E-06 42.1 6.3 55 307-361 56-114 (177)
87 4eqf_A PEX5-related protein; a 93.1 0.18 6.2E-06 46.5 7.1 55 307-361 111-166 (365)
88 2vq2_A PILW, putative fimbrial 93.0 0.23 8E-06 41.5 7.1 50 307-356 54-105 (225)
89 2q7f_A YRRB protein; TPR, prot 92.9 0.16 5.5E-06 43.3 6.1 55 307-361 171-226 (243)
90 3ieg_A DNAJ homolog subfamily 92.9 0.2 6.9E-06 45.0 7.0 53 307-359 49-102 (359)
91 2yhc_A BAMD, UPF0169 lipoprote 92.9 0.16 5.4E-06 44.4 6.1 55 307-361 108-180 (225)
92 1fch_A Peroxisomal targeting s 92.9 0.19 6.3E-06 46.0 6.8 55 307-361 263-318 (368)
93 2pzi_A Probable serine/threoni 92.9 0.14 4.7E-06 53.5 6.5 56 307-362 445-501 (681)
94 4eqf_A PEX5-related protein; a 92.8 0.21 7.2E-06 46.1 7.1 55 307-361 259-314 (365)
95 1hh8_A P67PHOX, NCF-2, neutrop 92.8 0.2 6.7E-06 42.4 6.3 55 307-361 83-154 (213)
96 2gw1_A Mitochondrial precursor 92.8 0.2 6.7E-06 48.0 7.0 54 307-360 51-105 (514)
97 3qou_A Protein YBBN; thioredox 92.7 0.079 2.7E-06 48.7 4.0 54 307-360 129-183 (287)
98 2r5s_A Uncharacterized protein 92.6 0.033 1.1E-06 46.8 1.1 53 307-359 18-71 (176)
99 2q7f_A YRRB protein; TPR, prot 92.5 0.3 1E-05 41.6 7.3 55 307-361 103-158 (243)
100 2y4t_A DNAJ homolog subfamily 92.5 0.36 1.2E-05 45.5 8.4 55 307-361 307-362 (450)
101 4gyw_A UDP-N-acetylglucosamine 92.4 0.29 9.8E-06 52.0 8.3 54 307-360 123-177 (723)
102 3cv0_A Peroxisome targeting si 92.3 0.3 1E-05 43.4 7.2 54 307-360 218-272 (327)
103 1zu2_A Mitochondrial import re 92.2 0.17 5.9E-06 44.0 5.3 53 310-362 61-125 (158)
104 3u4t_A TPR repeat-containing p 92.1 0.26 8.8E-06 43.1 6.5 55 307-361 49-107 (272)
105 1fch_A Peroxisomal targeting s 92.1 0.3 1E-05 44.6 7.1 55 307-361 110-165 (368)
106 4i17_A Hypothetical protein; T 91.9 0.35 1.2E-05 41.6 7.0 55 307-361 19-75 (228)
107 4gcn_A Protein STI-1; structur 91.9 0.34 1.2E-05 38.7 6.5 55 307-361 54-116 (127)
108 1wao_1 Serine/threonine protei 91.8 0.22 7.7E-06 49.6 6.4 56 306-361 17-73 (477)
109 3mkr_A Coatomer subunit epsilo 91.8 0.31 1E-05 45.0 6.8 56 307-362 178-234 (291)
110 2ho1_A Type 4 fimbrial biogene 91.8 0.47 1.6E-05 40.9 7.7 55 307-361 187-242 (252)
111 2r5s_A Uncharacterized protein 91.6 0.27 9.1E-06 41.1 5.7 50 307-356 120-172 (176)
112 1p5q_A FKBP52, FK506-binding p 91.6 0.35 1.2E-05 45.6 7.1 55 307-361 159-229 (336)
113 3cv0_A Peroxisome targeting si 91.6 0.4 1.4E-05 42.6 7.2 56 307-362 67-123 (327)
114 2vsy_A XCC0866; transferase, g 91.6 0.36 1.2E-05 48.3 7.6 55 307-361 69-124 (568)
115 3fp2_A TPR repeat-containing p 91.6 0.15 5E-06 49.4 4.6 46 307-352 71-117 (537)
116 2ho1_A Type 4 fimbrial biogene 91.6 0.31 1.1E-05 42.1 6.3 55 307-361 153-208 (252)
117 3u4t_A TPR repeat-containing p 91.5 0.13 4.6E-06 44.9 3.9 55 307-361 120-175 (272)
118 3hym_B Cell division cycle pro 91.4 0.5 1.7E-05 42.0 7.7 55 307-361 137-192 (330)
119 1zu2_A Mitochondrial import re 91.4 0.1 3.5E-06 45.4 2.9 55 307-361 14-79 (158)
120 2y4t_A DNAJ homolog subfamily 91.2 0.37 1.3E-05 45.4 6.9 55 307-361 72-127 (450)
121 1w3b_A UDP-N-acetylglucosamine 91.0 0.44 1.5E-05 44.4 7.1 54 307-360 283-337 (388)
122 4abn_A Tetratricopeptide repea 90.8 0.28 9.5E-06 48.6 5.8 54 307-360 114-169 (474)
123 3hym_B Cell division cycle pro 90.8 0.41 1.4E-05 42.6 6.4 55 307-361 68-124 (330)
124 2vsy_A XCC0866; transferase, g 90.8 0.41 1.4E-05 47.9 7.1 55 307-361 103-161 (568)
125 2gw1_A Mitochondrial precursor 90.4 0.45 1.5E-05 45.4 6.7 55 307-361 18-72 (514)
126 1w3b_A UDP-N-acetylglucosamine 90.3 0.42 1.4E-05 44.5 6.3 55 307-361 317-372 (388)
127 3qou_A Protein YBBN; thioredox 90.0 0.33 1.1E-05 44.4 5.2 55 307-361 197-252 (287)
128 4abn_A Tetratricopeptide repea 89.9 0.29 9.8E-06 48.5 5.0 53 309-361 235-291 (474)
129 2xpi_A Anaphase-promoting comp 89.9 0.57 1.9E-05 46.1 7.1 55 307-361 528-583 (597)
130 3fp2_A TPR repeat-containing p 89.8 0.59 2E-05 45.1 7.1 52 308-359 357-409 (537)
131 1kt0_A FKBP51, 51 kDa FK506-bi 89.7 0.52 1.8E-05 46.5 6.7 55 307-361 280-350 (457)
132 2pzi_A Probable serine/threoni 89.0 0.76 2.6E-05 47.8 7.7 56 306-361 402-466 (681)
133 2if4_A ATFKBP42; FKBP-like, al 88.4 0.57 1.9E-05 44.2 5.7 56 306-361 190-263 (338)
134 1ihg_A Cyclophilin 40; ppiase 87.9 0.34 1.2E-05 46.7 3.8 55 307-361 235-306 (370)
135 2xpi_A Anaphase-promoting comp 86.9 0.78 2.7E-05 45.1 5.8 52 308-359 420-472 (597)
136 3ma5_A Tetratricopeptide repea 86.8 0.98 3.4E-05 34.2 5.2 38 325-362 3-41 (100)
137 1qqe_A Vesicular transport pro 86.4 1 3.5E-05 40.9 6.0 54 309-362 132-192 (292)
138 3isr_A Transglutaminase-like e 86.4 0.85 2.9E-05 43.3 5.5 72 119-201 127-198 (293)
139 3dra_A Protein farnesyltransfe 86.1 1.2 4E-05 42.3 6.4 52 310-361 48-102 (306)
140 3kd4_A Putative protease; stru 85.9 1.4 4.7E-05 44.8 7.2 76 119-201 229-304 (506)
141 3ro3_A PINS homolog, G-protein 85.7 1.5 5E-05 34.0 5.9 54 307-360 61-121 (164)
142 1qqe_A Vesicular transport pro 84.7 0.79 2.7E-05 41.7 4.3 55 307-361 170-232 (292)
143 3edt_B KLC 2, kinesin light ch 84.4 1.8 6E-05 37.2 6.3 54 307-360 139-201 (283)
144 1pc2_A Mitochondria fission pr 84.2 1 3.4E-05 38.9 4.5 54 308-361 48-104 (152)
145 2ond_A Cleavage stimulation fa 83.8 1.5 5.3E-05 39.9 5.9 56 307-362 215-275 (308)
146 4g1t_A Interferon-induced prot 83.5 1.3 4.5E-05 42.1 5.5 56 307-362 225-281 (472)
147 2ooe_A Cleavage stimulation fa 83.4 1.6 5.4E-05 43.1 6.2 53 308-360 25-78 (530)
148 2ifu_A Gamma-SNAP; membrane fu 83.1 2.8 9.4E-05 38.3 7.4 55 307-362 167-228 (307)
149 3ro3_A PINS homolog, G-protein 83.1 2.5 8.7E-05 32.6 6.2 54 307-360 101-161 (164)
150 4a1s_A PINS, partner of inscut 82.4 2.5 8.4E-05 39.2 6.8 52 307-358 60-116 (411)
151 3qwp_A SET and MYND domain-con 81.9 3.8 0.00013 40.5 8.3 51 307-357 341-400 (429)
152 2ond_A Cleavage stimulation fa 81.6 2.5 8.5E-05 38.5 6.4 55 307-361 111-167 (308)
153 2l6j_A TPR repeat-containing p 81.4 0.1 3.4E-06 39.2 -2.7 46 307-352 50-102 (111)
154 3edt_B KLC 2, kinesin light ch 81.2 3.1 0.00011 35.6 6.6 51 307-357 97-156 (283)
155 3ro2_A PINS homolog, G-protein 81.1 3.5 0.00012 36.0 7.0 51 307-357 17-72 (338)
156 3nf1_A KLC 1, kinesin light ch 81.0 3.2 0.00011 36.2 6.8 54 307-360 165-227 (311)
157 3qww_A SET and MYND domain-con 80.9 4.8 0.00016 40.0 8.6 51 307-357 352-411 (433)
158 3ly7_A Transcriptional activat 78.3 4 0.00014 40.1 7.0 54 307-360 289-342 (372)
159 3nf1_A KLC 1, kinesin light ch 77.8 3.2 0.00011 36.3 5.6 36 325-360 274-310 (311)
160 3ro2_A PINS homolog, G-protein 77.7 3.9 0.00013 35.7 6.2 54 307-360 55-115 (338)
161 3q7a_A Farnesyltransferase alp 77.0 4.4 0.00015 39.3 6.8 49 310-358 104-155 (349)
162 1dce_A Protein (RAB geranylger 76.3 1.8 6.2E-05 44.3 4.0 51 310-360 124-176 (567)
163 3sf4_A G-protein-signaling mod 76.3 5.5 0.00019 36.2 7.0 50 308-357 22-76 (406)
164 2ifu_A Gamma-SNAP; membrane fu 76.0 4.8 0.00016 36.7 6.5 21 306-327 206-226 (307)
165 3n71_A Histone lysine methyltr 75.0 8.7 0.0003 38.7 8.6 51 307-357 363-422 (490)
166 3dss_A Geranylgeranyl transfer 73.9 6 0.00021 38.0 6.8 52 309-360 124-177 (331)
167 3gw4_A Uncharacterized protein 73.4 4.7 0.00016 33.0 5.3 52 307-358 38-96 (203)
168 4a1s_A PINS, partner of inscut 73.4 5.4 0.00019 36.8 6.2 52 307-358 98-156 (411)
169 3q15_A PSP28, response regulat 72.8 9 0.00031 35.6 7.7 54 307-360 234-293 (378)
170 3sf4_A G-protein-signaling mod 72.7 6.6 0.00023 35.7 6.5 54 307-360 59-119 (406)
171 1na3_A Designed protein CTPR2; 72.6 4.3 0.00015 28.7 4.3 36 307-342 55-91 (91)
172 3dra_A Protein farnesyltransfe 72.5 5.7 0.0002 37.5 6.2 51 309-359 124-177 (306)
173 2ooe_A Cleavage stimulation fa 71.9 4.3 0.00015 39.9 5.4 53 307-359 403-456 (530)
174 4g1t_A Interferon-induced prot 71.9 6.5 0.00022 37.1 6.5 54 307-360 63-126 (472)
175 2v5f_A Prolyl 4-hydroxylase su 71.5 7.8 0.00027 29.7 5.8 56 307-362 17-80 (104)
176 4f3v_A ESX-1 secretion system 70.9 7.7 0.00026 36.5 6.6 54 307-360 183-240 (282)
177 3ulq_A Response regulator aspa 70.4 12 0.0004 34.7 7.8 53 307-359 236-295 (383)
178 3gw4_A Uncharacterized protein 69.9 10 0.00035 30.9 6.6 53 307-359 119-178 (203)
179 1nzn_A CGI-135 protein, fissio 69.8 12 0.0004 31.2 6.8 54 307-361 50-107 (126)
180 4f3v_A ESX-1 secretion system 69.4 2.9 9.7E-05 39.5 3.3 48 307-355 147-198 (282)
181 2qfc_A PLCR protein; TPR, HTH, 68.5 14 0.00048 33.0 7.7 49 310-358 170-226 (293)
182 1hz4_A MALT regulatory protein 68.3 7.8 0.00027 35.5 6.0 55 307-361 147-207 (373)
183 1dce_A Protein (RAB geranylger 68.2 6.3 0.00022 40.3 5.8 52 310-361 44-106 (567)
184 3u3w_A Transcriptional activat 68.0 14 0.00046 33.1 7.5 51 308-358 209-267 (293)
185 3u3w_A Transcriptional activat 66.6 9.9 0.00034 34.0 6.3 53 308-360 168-228 (293)
186 2ff4_A Probable regulatory pro 65.7 9.1 0.00031 37.1 6.2 53 306-358 182-235 (388)
187 2qfc_A PLCR protein; TPR, HTH, 64.9 12 0.00042 33.4 6.5 51 307-357 208-266 (293)
188 3ulq_A Response regulator aspa 61.8 10 0.00034 35.1 5.5 55 307-361 115-176 (383)
189 1ouv_A Conserved hypothetical 61.7 8 0.00027 33.8 4.5 53 308-361 199-255 (273)
190 1hz4_A MALT regulatory protein 60.3 16 0.00056 33.3 6.6 54 307-360 65-125 (373)
191 1ouv_A Conserved hypothetical 56.9 25 0.00084 30.5 6.9 49 308-357 91-143 (273)
192 3dss_A Geranylgeranyl transfer 56.7 21 0.0007 34.2 6.8 50 311-360 90-142 (331)
193 1zbp_A Hypothetical protein VP 56.2 26 0.0009 32.9 7.2 57 306-362 8-65 (273)
194 3u64_A Protein TP_0956; tetrat 56.0 23 0.00077 33.8 6.8 50 311-360 179-236 (301)
195 3q7a_A Farnesyltransferase alp 52.7 15 0.00051 35.5 5.1 49 312-360 71-121 (349)
196 2kc7_A BFR218_protein; tetratr 52.0 15 0.00052 26.5 4.0 30 332-361 4-33 (99)
197 3q15_A PSP28, response regulat 50.8 20 0.00068 33.2 5.5 54 307-360 113-173 (378)
198 3rjv_A Putative SEL1 repeat pr 50.7 46 0.0016 28.2 7.5 49 308-356 142-196 (212)
199 4gns_B Protein CSD3, chitin bi 47.4 22 0.00076 38.0 5.8 48 307-354 349-397 (754)
200 1y8m_A FIS1; mitochondria, unk 45.9 35 0.0012 29.1 5.7 53 308-360 55-109 (144)
201 3o48_A Mitochondria fission 1 45.6 24 0.00084 29.6 4.6 52 309-360 57-110 (134)
202 4b4t_Q 26S proteasome regulato 44.4 30 0.001 32.0 5.7 53 307-359 16-86 (434)
203 3qww_A SET and MYND domain-con 42.8 50 0.0017 32.5 7.2 50 307-356 310-368 (433)
204 3qwp_A SET and MYND domain-con 39.7 56 0.0019 31.9 7.0 50 307-356 299-357 (429)
205 3mv2_B Coatomer subunit epsilo 39.5 72 0.0024 30.2 7.5 52 308-359 113-167 (310)
206 3n71_A Histone lysine methyltr 36.6 79 0.0027 31.6 7.7 50 307-356 321-379 (490)
207 3u64_A Protein TP_0956; tetrat 34.4 42 0.0014 31.9 4.9 54 306-359 215-271 (301)
208 2f4m_A Peptide N-glycanase; gl 33.1 2.3E+02 0.0079 26.7 9.8 30 172-201 131-160 (295)
209 1klx_A Cysteine rich protein B 29.4 1.5E+02 0.0051 23.3 6.9 49 308-357 74-126 (138)
210 3rjv_A Putative SEL1 repeat pr 28.2 1.6E+02 0.0054 24.7 7.3 50 308-357 102-158 (212)
211 2v5f_A Prolyl 4-hydroxylase su 27.9 86 0.003 23.5 5.0 29 307-335 58-87 (104)
212 3mv2_B Coatomer subunit epsilo 26.8 59 0.002 30.8 4.5 56 305-362 221-287 (310)
213 1y8m_A FIS1; mitochondria, unk 25.4 71 0.0024 27.1 4.3 24 305-328 87-110 (144)
214 3o48_A Mitochondria fission 1 24.1 79 0.0027 26.5 4.3 23 306-328 89-111 (134)
215 2xm6_A Protein corresponding t 23.8 1.8E+02 0.0061 27.7 7.5 51 308-359 380-434 (490)
216 2uy1_A Cleavage stimulation fa 23.7 1.4E+02 0.0048 29.4 6.8 50 311-361 195-245 (493)
217 1nzn_A CGI-135 protein, fissio 22.4 68 0.0023 26.4 3.5 22 306-327 85-106 (126)
No 1
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=96.90 E-value=0.0018 Score=49.25 Aligned_cols=55 Identities=18% Similarity=0.175 Sum_probs=51.4
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++.+.++| ++..+..+|.+++++|+|++|+..++..++..|+.
T Consensus 16 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 16 KQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 57899999999999999999 67889999999999999999999999999988875
No 2
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=96.85 E-value=0.0017 Score=52.67 Aligned_cols=55 Identities=9% Similarity=0.101 Sum_probs=51.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.++| ++..+..+|.+|+++|+|++|+.+++..++..|+.
T Consensus 20 ~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~ 75 (127)
T 4gcn_A 20 KQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRET 75 (127)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCccc
Confidence 57899999999999999999 57789999999999999999999999999988765
No 3
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=96.85 E-value=0.0028 Score=47.85 Aligned_cols=56 Identities=16% Similarity=0.100 Sum_probs=51.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChH-HHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAK-ELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~-e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+...++++.++| ++. .+..+|.++++.|++++|+..++..++..|+..
T Consensus 12 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 69 (99)
T 2kc7_A 12 NQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP 69 (99)
T ss_dssp HHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred HcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence 45799999999999999999 678 899999999999999999999999999998764
No 4
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=96.80 E-value=0.0036 Score=51.91 Aligned_cols=55 Identities=15% Similarity=0.092 Sum_probs=50.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+..+++.+.++| ++.-+.-+|.+|+++|+|++|+.+++..++..|+.
T Consensus 75 ~~~~~~~A~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~ 130 (162)
T 3rkv_A 75 NIGDLHEAEETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAA 130 (162)
T ss_dssp HHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGG
T ss_pred hcCcHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCC
Confidence 45699999999999999999 57788999999999999999999999999999875
No 5
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=96.77 E-value=0.0029 Score=51.43 Aligned_cols=55 Identities=15% Similarity=0.050 Sum_probs=45.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+..+++.+.++| ++.-+.-+|.++.++|++++|+.+++..++.-|+.
T Consensus 59 ~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~ 114 (126)
T 4gco_A 59 KLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSN 114 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCC
Confidence 67888888888888888888 46678888888888888888888888888888765
No 6
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=96.75 E-value=0.0024 Score=54.33 Aligned_cols=56 Identities=5% Similarity=-0.119 Sum_probs=51.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+.+.++.+.++| ++.-+..+|.+|.++|++++|+..++..++..|++.
T Consensus 82 ~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~~ 138 (151)
T 3gyz_A 82 IKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEK 138 (151)
T ss_dssp HTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHH
T ss_pred HHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCHH
Confidence 67899999999999999999 688899999999999999999999999999988764
No 7
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=96.72 E-value=0.0032 Score=53.59 Aligned_cols=56 Identities=11% Similarity=-0.022 Sum_probs=52.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+.+.++++.++| ++.-+..+|.+|+++|+|++|+..++.-++..|+..
T Consensus 48 ~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~ 104 (151)
T 3gyz_A 48 NKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDY 104 (151)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCC
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCc
Confidence 67899999999999999999 688999999999999999999999999999999864
No 8
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=96.71 E-value=0.0039 Score=49.14 Aligned_cols=55 Identities=24% Similarity=0.206 Sum_probs=51.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.+.| ++..+..+|.+++++|++++|+..++..++..|+.
T Consensus 39 ~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 94 (117)
T 3k9i_A 39 TLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVELLLKIIAETSDD 94 (117)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCC
T ss_pred HcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 56899999999999999999 57788999999999999999999999999998875
No 9
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=96.70 E-value=0.0034 Score=51.26 Aligned_cols=55 Identities=11% Similarity=-0.075 Sum_probs=51.4
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.++| ++.-+..+|.++.++|++++|+..++..++..|+.
T Consensus 64 ~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 119 (142)
T 2xcb_A 64 SLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQ 119 (142)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC
T ss_pred HHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 67899999999999999999 68888999999999999999999999999998865
No 10
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=96.69 E-value=0.0039 Score=50.64 Aligned_cols=55 Identities=11% Similarity=0.041 Sum_probs=51.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
+.|+++.|+.+.++.+.++| ++..+..+|.+++++|.+++|+.+++..++.-|+.
T Consensus 25 ~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 80 (126)
T 4gco_A 25 KKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKF 80 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhh
Confidence 56799999999999999999 68899999999999999999999999999988875
No 11
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=96.62 E-value=0.0043 Score=49.88 Aligned_cols=55 Identities=11% Similarity=-0.015 Sum_probs=38.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.++| ++.-+..+|.++.+.|++++|+..++..++..|+.
T Consensus 63 ~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~ 118 (121)
T 1hxi_A 63 ENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQY 118 (121)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC
Confidence 56778888888888888888 46677777888888888888888887777777654
No 12
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=96.62 E-value=0.0045 Score=51.61 Aligned_cols=55 Identities=13% Similarity=0.044 Sum_probs=51.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.++| ++.-+..+|.+|.++|++++|+..++..++..|+.
T Consensus 67 ~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 122 (148)
T 2vgx_A 67 AMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANX 122 (148)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTC
T ss_pred HHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence 57899999999999999999 68889999999999999999999999999998864
No 13
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=96.56 E-value=0.0069 Score=44.29 Aligned_cols=55 Identities=18% Similarity=0.258 Sum_probs=50.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++.+.+.| ++.-+..+|.++.+.|++++|+..++..++..|+.
T Consensus 21 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 76 (91)
T 1na3_A 21 KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN 76 (91)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC
Confidence 46799999999999999999 57789999999999999999999999999988865
No 14
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=96.54 E-value=0.0061 Score=48.06 Aligned_cols=52 Identities=13% Similarity=0.130 Sum_probs=46.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHh
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQW 358 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~ 358 (364)
..|+++.|+.+.++.+.++| ++.-+..+|.++.++|++++|+..++..++..
T Consensus 50 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 102 (126)
T 3upv_A 50 KLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKD 102 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhC
Confidence 67899999999999999999 57788889999999999999999999999888
No 15
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=96.52 E-value=0.0048 Score=47.72 Aligned_cols=54 Identities=11% Similarity=0.001 Sum_probs=49.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|+++.|+.+.++.+.++| ++.-+..+|.+|.++|++++|+..++..++..|+
T Consensus 19 ~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 19 KHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 46799999999999999999 5778999999999999999999999999887664
No 16
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=96.52 E-value=0.0056 Score=50.93 Aligned_cols=55 Identities=11% Similarity=-0.052 Sum_probs=38.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.++| ++..+.-+|.++.+.|.+++|+..++..++..|+.
T Consensus 43 ~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 98 (150)
T 4ga2_A 43 EAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQ 98 (150)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCC
Confidence 34577777777777777777 46666777777777777777777777777666654
No 17
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=96.49 E-value=0.0067 Score=50.38 Aligned_cols=56 Identities=11% Similarity=-0.003 Sum_probs=52.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+.++++.+.++| ++.-+..+|.+|+++|++++|+..++..++..|+..
T Consensus 57 ~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 113 (164)
T 3sz7_A 57 ASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNGG 113 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSSC
T ss_pred HccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCch
Confidence 67899999999999999999 577899999999999999999999999999999864
No 18
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=96.44 E-value=0.0076 Score=47.50 Aligned_cols=55 Identities=15% Similarity=0.048 Sum_probs=51.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++.+.++| ++..+..+|.+++++|+|++|+.+++..++..|+.
T Consensus 16 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 71 (126)
T 3upv_A 16 TKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF 71 (126)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 46799999999999999999 67899999999999999999999999999998875
No 19
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=96.41 E-value=0.007 Score=49.33 Aligned_cols=57 Identities=25% Similarity=0.220 Sum_probs=52.3
Q ss_pred cCcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 306 VRFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 306 lr~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
...|+++.|+...++++.++| ++.-+..+|.++.+.|+|++|+..++.-++..|+..
T Consensus 29 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 86 (142)
T 2xcb_A 29 YQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEP 86 (142)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT
T ss_pred HHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc
Confidence 357899999999999999999 678899999999999999999999999999988753
No 20
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=96.36 E-value=0.003 Score=50.84 Aligned_cols=55 Identities=11% Similarity=-0.019 Sum_probs=51.4
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
+.|+++.|+.+.++.+.++| ++..+..+|.++.+.|++++|+..++.-++..|+.
T Consensus 29 ~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~ 84 (121)
T 1hxi_A 29 KLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKD 84 (121)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 56799999999999999999 67889999999999999999999999999998875
No 21
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=96.35 E-value=0.0098 Score=44.47 Aligned_cols=55 Identities=9% Similarity=-0.101 Sum_probs=35.2
Q ss_pred CcCCHHHHHHHHHHHhccCCC---hHHHHHHhHHHHHc-CChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLESD---AKELRDYSILLYHC-GLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~Pd---p~e~RDrGlLl~~l-g~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.+.|+ +.-+..+|.++.++ |++++|++.++..++..|++
T Consensus 52 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 52 NLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp HTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred HccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 456666666666666666664 33566666666666 66666666666666666654
No 22
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=96.35 E-value=0.0078 Score=50.12 Aligned_cols=56 Identities=13% Similarity=0.121 Sum_probs=52.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+...++++.++| ++..+.-+|.++.++|+|++|+..++.-++..|+..
T Consensus 33 ~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 89 (148)
T 2vgx_A 33 QSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEP 89 (148)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT
T ss_pred HcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc
Confidence 57899999999999999999 688899999999999999999999999999988764
No 23
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=96.35 E-value=0.0092 Score=46.61 Aligned_cols=56 Identities=18% Similarity=0.108 Sum_probs=51.1
Q ss_pred CcCCHHHHHHHHHHHhccCC-C---hHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-D---AKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-d---p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+...++++.+.| + +.-+..+|.++++.|++++|...++..++..|++.
T Consensus 51 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~~ 110 (129)
T 2xev_A 51 ATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGSD 110 (129)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTSH
T ss_pred HhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCh
Confidence 56899999999999999999 5 55688999999999999999999999999999864
No 24
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=96.23 E-value=0.0094 Score=49.45 Aligned_cols=55 Identities=7% Similarity=-0.014 Sum_probs=51.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.++| ++..+..+|.+|+++|+|++|+.+++..++..|+.
T Consensus 23 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 78 (164)
T 3sz7_A 23 ARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKY 78 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Confidence 56799999999999999999 68899999999999999999999999999998875
No 25
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=96.17 E-value=0.0056 Score=51.27 Aligned_cols=55 Identities=16% Similarity=0.215 Sum_probs=50.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.++| ++.-+.-+|.+|.++|++++|+..++.-++.-|+.
T Consensus 119 ~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 174 (184)
T 3vtx_A 119 SMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKK 174 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHH
T ss_pred HhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccC
Confidence 46799999999999999999 67789999999999999999999999999988764
No 26
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.13 E-value=0.025 Score=44.73 Aligned_cols=55 Identities=20% Similarity=0.100 Sum_probs=51.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.++++.+.+.| ++..+..+|.+++++|++++|...++..++..|+.
T Consensus 77 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 132 (148)
T 2dba_A 77 KLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKN 132 (148)
T ss_dssp HTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSC
T ss_pred HHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence 56899999999999999999 67788999999999999999999999999988874
No 27
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=96.08 E-value=0.016 Score=43.55 Aligned_cols=55 Identities=15% Similarity=0.006 Sum_probs=44.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.+.| ++..+..+|.++.+.|++.+|...++..++..|+.
T Consensus 50 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 105 (118)
T 1elw_A 50 KKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANN 105 (118)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC
T ss_pred hhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCC
Confidence 67888888888888888888 56677888888888888888888888888777654
No 28
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=96.08 E-value=0.015 Score=45.85 Aligned_cols=54 Identities=17% Similarity=0.154 Sum_probs=49.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|+++.|+.+.++.+.++| ++.-+..+|.+++++|++++|+..++..++..|+
T Consensus 55 ~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~ 109 (137)
T 3q49_B 55 KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKE 109 (137)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChh
Confidence 68899999999999999999 5778889999999999999999999999998887
No 29
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=96.07 E-value=0.015 Score=45.29 Aligned_cols=55 Identities=9% Similarity=0.003 Sum_probs=50.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-Ch---HHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DA---KELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp---~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++++...| ++ ..+..+|.++++.|+|++|+..++..++..|++
T Consensus 14 ~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~ 72 (129)
T 2xev_A 14 KNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTH 72 (129)
T ss_dssp HTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred HhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCC
Confidence 46799999999999999999 56 478899999999999999999999999999986
No 30
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=96.01 E-value=0.0081 Score=52.51 Aligned_cols=55 Identities=13% Similarity=0.065 Sum_probs=50.3
Q ss_pred CcCCHHHHHHHHHHHhcc-------CCC-hHHH----HHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILL-------ESD-AKEL----RDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL-------~Pd-p~e~----RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
.-|+++.|+.++++.|.+ +|+ +..| --+|..|..+|++++|+.+++.-++..|+-
T Consensus 69 ~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d 135 (159)
T 2hr2_A 69 GLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER 135 (159)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred HCCCHHHHHHHHHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 567999999999999999 996 5678 899999999999999999999999988864
No 31
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=96.00 E-value=0.013 Score=46.32 Aligned_cols=55 Identities=15% Similarity=-0.126 Sum_probs=50.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.++| ++.-+..+|.++++.|+|.+|+..++..++..|+.
T Consensus 21 ~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~ 76 (137)
T 3q49_B 21 VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS 76 (137)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchh
Confidence 45699999999999999999 57889999999999999999999999999988874
No 32
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=95.97 E-value=0.028 Score=48.00 Aligned_cols=55 Identities=15% Similarity=0.138 Sum_probs=50.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.++++.+.++| ++.-+.-+|.+++++|+|++|+..++..++..|+.
T Consensus 100 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 155 (198)
T 2fbn_A 100 KNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNN 155 (198)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred HhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc
Confidence 34699999999999999999 57788999999999999999999999999998865
No 33
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=95.97 E-value=0.025 Score=49.27 Aligned_cols=55 Identities=9% Similarity=-0.016 Sum_probs=50.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.++| ++..+..+|.++...|++++|+..++..++.-|+.
T Consensus 66 ~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~ 121 (208)
T 3urz_A 66 KNRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADN 121 (208)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Confidence 45799999999999999999 67889999999999999999999999999998875
No 34
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=95.91 E-value=0.021 Score=44.08 Aligned_cols=56 Identities=18% Similarity=0.126 Sum_probs=51.4
Q ss_pred cCcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 306 VRFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 306 lr~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
...|+++.|+.+.++.+.+.| ++.-+..+|.++++.|++++|+..++..++..|+.
T Consensus 61 ~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~ 117 (133)
T 2lni_A 61 TKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSC 117 (133)
T ss_dssp TTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGG
T ss_pred HHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCc
Confidence 367899999999999999999 57889999999999999999999999999988764
No 35
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=95.77 E-value=0.021 Score=44.33 Aligned_cols=54 Identities=11% Similarity=-0.077 Sum_probs=49.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|+++.|+.+.++.+.++| ++.-+..+|.++.+.|++++|+..++..++..|+
T Consensus 31 ~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 85 (115)
T 2kat_A 31 EHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAAAQS 85 (115)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccc
Confidence 56799999999999999999 5778899999999999999999999999988764
No 36
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=95.76 E-value=0.032 Score=52.87 Aligned_cols=54 Identities=15% Similarity=0.180 Sum_probs=42.7
Q ss_pred cCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 308 FGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 308 ~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
.|+++.|+.++++.+.++| ++..+..+|.+|+++|+|++|+.+++..++..|+.
T Consensus 209 ~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~ 263 (336)
T 1p5q_A 209 LQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNN 263 (336)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSC
T ss_pred cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Confidence 4488888888888888888 46677788888888888888888888888877764
No 37
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=95.74 E-value=0.023 Score=47.45 Aligned_cols=55 Identities=16% Similarity=0.210 Sum_probs=48.1
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.++| ++.-+..+|.+|.+.|.+++|+..++..+...|+.
T Consensus 17 ~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~ 72 (184)
T 3vtx_A 17 TKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTS 72 (184)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCC
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchh
Confidence 45799999999999999999 57788899999999999999999999888877764
No 38
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=95.71 E-value=0.022 Score=42.80 Aligned_cols=55 Identities=15% Similarity=0.044 Sum_probs=50.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++.+.+.| ++..+..+|.++.+.|++++|+..++..++..|+.
T Consensus 16 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (118)
T 1elw_A 16 SVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW 71 (118)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCccc
Confidence 46799999999999999999 67889999999999999999999999999988764
No 39
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=95.66 E-value=0.025 Score=49.62 Aligned_cols=56 Identities=21% Similarity=0.137 Sum_probs=52.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+...++.+.++| ++..+..+|.++.+.|++++|+..++..++..|+..
T Consensus 17 ~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~ 73 (217)
T 2pl2_A 17 ALGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYL 73 (217)
T ss_dssp HTTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH
Confidence 56799999999999999999 578899999999999999999999999999998753
No 40
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=95.66 E-value=0.032 Score=42.57 Aligned_cols=55 Identities=18% Similarity=0.219 Sum_probs=50.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.+.| ++..+..+|.++.+.|++++|...++..++..|+.
T Consensus 58 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 113 (131)
T 2vyi_A 58 KLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDN 113 (131)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccc
Confidence 56899999999999999999 57789999999999999999999999999988864
No 41
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=95.61 E-value=0.022 Score=43.99 Aligned_cols=55 Identities=15% Similarity=0.007 Sum_probs=50.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.+.| ++..+..+|.++.+.|++++|+..++..++..|+.
T Consensus 28 ~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~ 83 (133)
T 2lni_A 28 QKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTF 83 (133)
T ss_dssp HTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTC
T ss_pred HcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc
Confidence 56799999999999999999 67889999999999999999999999999988764
No 42
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=95.47 E-value=0.023 Score=42.35 Aligned_cols=54 Identities=17% Similarity=0.225 Sum_probs=50.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|+++.|+.+.++.+.+.| ++..+..+|.++++.|++++|+..++..++..|+
T Consensus 18 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 18 DAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp SSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred HhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 56799999999999999999 5778999999999999999999999999998876
No 43
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=95.46 E-value=0.039 Score=41.92 Aligned_cols=55 Identities=16% Similarity=0.233 Sum_probs=49.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++++.+.| ++..+...|.++++.|++++|...++..++..|++
T Consensus 81 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 81 KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 56799999999999999999 57778899999999999999999999999888764
No 44
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=95.44 E-value=0.043 Score=41.45 Aligned_cols=55 Identities=18% Similarity=0.258 Sum_probs=50.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++++.+.| ++..+...|.++++.|++++|...++..++..|+.
T Consensus 55 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 110 (125)
T 1na0_A 55 KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN 110 (125)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 56899999999999999999 67788999999999999999999999999888764
No 45
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=95.39 E-value=0.04 Score=44.40 Aligned_cols=55 Identities=16% Similarity=0.013 Sum_probs=48.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.+.| ++..+..+|.++.+.|++++|+..++..++..|+.
T Consensus 59 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~ 114 (166)
T 1a17_A 59 RTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHD 114 (166)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Confidence 56799999999999999999 57788899999999999999999999998887764
No 46
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.38 E-value=0.057 Score=42.51 Aligned_cols=55 Identities=18% Similarity=0.047 Sum_probs=50.3
Q ss_pred CcCCHHHHHHHHHHHhccCCC----hHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLESD----AKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~Pd----p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++.+.+.|+ +..+..+|.++++.|+|++|+..++..++..|+.
T Consensus 40 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 98 (148)
T 2dba_A 40 KCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD 98 (148)
T ss_dssp TTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC
T ss_pred HhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC
Confidence 567999999999999999996 4578999999999999999999999999988764
No 47
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=95.35 E-value=0.0087 Score=47.07 Aligned_cols=54 Identities=19% Similarity=0.043 Sum_probs=46.1
Q ss_pred cCCHHHHHHHHHHHhcc---CC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 308 FGDMRCALAACERLILL---ES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 308 ~~d~~~AL~a~ErLllL---~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
.|+++.|+.+.++.+.+ +| ++..+..+|.+|++.|+|++|+..++..++..|+.
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~ 60 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNH 60 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 46889999999999999 47 46689999999999999999999999999999875
No 48
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=95.35 E-value=0.035 Score=49.34 Aligned_cols=56 Identities=9% Similarity=-0.009 Sum_probs=51.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-C---hHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-D---AKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-d---p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+...+.++...| + +.-+..+|.++++.|.|.+|+..++.+++..|++.
T Consensus 27 ~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~ 86 (261)
T 3qky_A 27 NQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDP 86 (261)
T ss_dssp HTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT
T ss_pred HhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCc
Confidence 57899999999999999999 5 45789999999999999999999999999998753
No 49
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=95.34 E-value=0.034 Score=55.12 Aligned_cols=56 Identities=13% Similarity=0.100 Sum_probs=48.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+.++++.+.++| ++..+.-+|.+|+++|+|++|+.+++..++..|+..
T Consensus 329 ~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~~ 385 (457)
T 1kt0_A 329 KLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNK 385 (457)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC----
T ss_pred HhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence 56799999999999999999 577899999999999999999999999999888653
No 50
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=95.32 E-value=0.048 Score=41.52 Aligned_cols=55 Identities=13% Similarity=0.039 Sum_probs=50.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++.+.+.| ++..+..+|.++.+.|.+++|+..++..++..|+.
T Consensus 24 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 79 (131)
T 2vyi_A 24 KVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAY 79 (131)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccC
Confidence 46799999999999999999 57789999999999999999999999999988764
No 51
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=95.26 E-value=0.038 Score=48.50 Aligned_cols=56 Identities=13% Similarity=-0.025 Sum_probs=50.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-Ch---HHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DA---KELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp---~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+...++++...| ++ ..+-.+|.++++.|.|++|+..++.+++..|++.
T Consensus 16 ~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~ 75 (225)
T 2yhc_A 16 QDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHP 75 (225)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT
T ss_pred HcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCC
Confidence 56799999999999999999 44 3688899999999999999999999999999874
No 52
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=95.07 E-value=0.046 Score=41.75 Aligned_cols=55 Identities=11% Similarity=0.106 Sum_probs=50.1
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++.+.+.| ++..+..+|.++.+.|.+++|+..++..++..|+.
T Consensus 16 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 71 (131)
T 1elr_A 16 KKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGREN 71 (131)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS
T ss_pred HhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcccc
Confidence 46799999999999999999 57788999999999999999999999999887753
No 53
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=95.07 E-value=0.082 Score=51.11 Aligned_cols=55 Identities=20% Similarity=0.163 Sum_probs=51.1
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.++++.+.++| ++..+--+|.+|+++|+|++|+.+|+..++..|+.
T Consensus 285 ~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~ 340 (370)
T 1ihg_A 285 KMSDWQGAVDSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPED 340 (370)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hccCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC
Confidence 57799999999999999999 57788999999999999999999999999998864
No 54
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=95.05 E-value=0.058 Score=43.40 Aligned_cols=55 Identities=15% Similarity=0.012 Sum_probs=50.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++.+.+.| ++..+..+|.++.+.|+|.+|+..++..++..|+.
T Consensus 25 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~ 80 (166)
T 1a17_A 25 KAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKY 80 (166)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 46799999999999999999 57789999999999999999999999999988864
No 55
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.01 E-value=0.046 Score=42.72 Aligned_cols=51 Identities=8% Similarity=-0.055 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 310 DMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 310 d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..+.|....++.|.++| ++.-+-..|.++++.|+|.+|+..++..+++.|+
T Consensus 24 ~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~ 75 (93)
T 3bee_A 24 MTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDP 75 (93)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCT
T ss_pred CCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 47899999999999999 5789999999999999999999999999999888
No 56
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=95.01 E-value=0.072 Score=40.13 Aligned_cols=55 Identities=18% Similarity=0.258 Sum_probs=49.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++++...| ++..+...|.++++.|++++|+..++..++..|+.
T Consensus 21 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 76 (125)
T 1na0_A 21 KQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN 76 (125)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc
Confidence 46799999999999999999 57788999999999999999999999999887764
No 57
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=94.97 E-value=0.054 Score=46.00 Aligned_cols=55 Identities=22% Similarity=0.122 Sum_probs=51.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++.+.++| ++..+..+|.+++..|++++|+..++..++..|+.
T Consensus 49 ~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~ 104 (213)
T 1hh8_A 49 ILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGN 104 (213)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTC
T ss_pred HcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCc
Confidence 57899999999999999999 57789999999999999999999999999988764
No 58
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=94.95 E-value=0.029 Score=48.80 Aligned_cols=56 Identities=13% Similarity=0.060 Sum_probs=50.3
Q ss_pred cCcCCHHHHHHHHHHHhccCC-ChHHHHH----------------HhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 306 VRFGDMRCALAACERLILLES-DAKELRD----------------YSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 306 lr~~d~~~AL~a~ErLllL~P-dp~e~RD----------------rGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
+..|+++.|+.+.++.+.++| ++..+.- +|.++.+.|++++|+..++..++..|+.
T Consensus 15 ~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 87 (208)
T 3urz_A 15 IEAGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNN 87 (208)
T ss_dssp HHTTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHCCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Confidence 357899999999999999999 4656666 9999999999999999999999999875
No 59
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=94.93 E-value=0.015 Score=48.19 Aligned_cols=56 Identities=13% Similarity=0.075 Sum_probs=50.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|++++|+...+..+..+| .+...-..|.+|++.|.|+.|+..++..++..|+..
T Consensus 9 ~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~ 65 (150)
T 4ga2_A 9 SKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDP 65 (150)
T ss_dssp CHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 45699999999999999999 466778899999999999999999999999999863
No 60
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=94.90 E-value=0.038 Score=42.78 Aligned_cols=50 Identities=6% Similarity=-0.087 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 312 RCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 312 ~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
+.|+...++.+.++| ++..+..+|.++++.|++++|+..++..++..|+.
T Consensus 2 ~~a~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 52 (115)
T 2kat_A 2 QAITERLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTY 52 (115)
T ss_dssp CCHHHHHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred hHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCc
Confidence 358889999999999 67899999999999999999999999999988875
No 61
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=94.89 E-value=0.065 Score=43.35 Aligned_cols=57 Identities=19% Similarity=0.137 Sum_probs=52.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcCC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNISV 363 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~~ 363 (364)
..|+++.|+.+.+..+.+.| ++..+...|.++.+.|++++|...++..++..|+..+
T Consensus 122 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~ 179 (186)
T 3as5_A 122 NLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFKKANELDEGASV 179 (186)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCCCG
T ss_pred HcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCchh
Confidence 46799999999999999999 5778999999999999999999999999999988754
No 62
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=94.86 E-value=0.032 Score=52.98 Aligned_cols=56 Identities=13% Similarity=0.070 Sum_probs=46.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+..+++.+.++| ++..+.-+|.+|+++|+|++|+.+|+..++..|+..
T Consensus 242 ~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~ 298 (338)
T 2if4_A 242 KLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDK 298 (338)
T ss_dssp TTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCH
Confidence 56799999999999999999 577899999999999999999999999988887653
No 63
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=94.80 E-value=0.054 Score=46.84 Aligned_cols=55 Identities=9% Similarity=-0.135 Sum_probs=51.2
Q ss_pred CcCCHHHHHHHHHHHhccCCC-hHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLESD-AKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~Pd-p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++.+.++|+ +.-+..+|.++.+.|.+++|+..++..++..|+.
T Consensus 54 ~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~ 109 (228)
T 4i17_A 54 NIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGN 109 (228)
T ss_dssp HTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc
Confidence 568999999999999999995 6789999999999999999999999999998875
No 64
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=94.43 E-value=0.076 Score=44.05 Aligned_cols=55 Identities=11% Similarity=0.027 Sum_probs=50.4
Q ss_pred CcCCH--HHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDM--RCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~--~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|++ +.|+.+.++.+.++| ++..+..+|.++++.|++.+|+..++..++..|+.
T Consensus 91 ~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 148 (177)
T 2e2e_A 91 QASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPR 148 (177)
T ss_dssp HTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTT
T ss_pred hcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC
Confidence 45787 999999999999999 57789999999999999999999999999998875
No 65
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=94.36 E-value=0.068 Score=40.75 Aligned_cols=54 Identities=17% Similarity=0.242 Sum_probs=48.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-C-------hHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILLES-D-------AKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-d-------p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|+++.|+.+.++.+.+.| + +.-+...|.++++.|++++|...++..++..|+
T Consensus 50 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~ 111 (131)
T 1elr_A 50 EKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRT 111 (131)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC
T ss_pred HhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC
Confidence 56799999999999999988 5 567889999999999999999999999988775
No 66
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=94.33 E-value=0.084 Score=48.41 Aligned_cols=56 Identities=16% Similarity=0.136 Sum_probs=51.4
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+..+++.+.++| ++..+.-+|.+|+++|++++|+..++..++..|+..
T Consensus 50 ~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~ 106 (281)
T 2c2l_A 50 KMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQR 106 (281)
T ss_dssp HTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccch
Confidence 57899999999999999999 577888999999999999999999999999988753
No 67
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=94.24 E-value=0.12 Score=39.15 Aligned_cols=55 Identities=16% Similarity=0.233 Sum_probs=49.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++++.+.| ++.-+...|.++.+.|.+++|+..++..++..|+.
T Consensus 47 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~ 102 (136)
T 2fo7_A 47 KQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 102 (136)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC
T ss_pred HhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC
Confidence 46799999999999999999 57788899999999999999999999999887754
No 68
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=94.21 E-value=0.086 Score=45.93 Aligned_cols=51 Identities=14% Similarity=0.073 Sum_probs=46.7
Q ss_pred CcCCHHHHHHHHHHHhccCCC-h------------HHHHHHhHHHHHcCChHHHHHHHHHHHHH
Q 017874 307 RFGDMRCALAACERLILLESD-A------------KELRDYSILLYHCGLYEQSLQYLKFYQAQ 357 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~Pd-p------------~e~RDrGlLl~~lg~~~~A~~dL~~fl~~ 357 (364)
..|+++.|+.++++.|.++|+ | ..+-.+|.++..+|+|++|+.+++.-++.
T Consensus 23 ~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l 86 (159)
T 2hr2_A 23 VAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHY 86 (159)
T ss_dssp HHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 467999999999999999996 2 27889999999999999999999999998
No 69
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=94.12 E-value=0.14 Score=46.09 Aligned_cols=55 Identities=16% Similarity=0.203 Sum_probs=51.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.+..+.+.| ++..+..+|.++.+.|.+++|...++..++..|+.
T Consensus 284 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~ 339 (359)
T 3ieg_A 284 KDEKPVEAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNEND 339 (359)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC
T ss_pred HccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 56799999999999999999 68899999999999999999999999999988875
No 70
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=94.07 E-value=0.13 Score=43.70 Aligned_cols=55 Identities=5% Similarity=-0.098 Sum_probs=50.1
Q ss_pred CcCCHHHHHHHHHHHhccCC-Ch----------------HHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DA----------------KELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp----------------~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++.+.+.| ++ ..+..+|.++.++|+|++|+.+++..++..|+.
T Consensus 50 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~ 121 (198)
T 2fbn_A 50 KKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNN 121 (198)
T ss_dssp HTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCccc
Confidence 56799999999999999999 67 678899999999999999999999999988764
No 71
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=94.05 E-value=0.064 Score=46.94 Aligned_cols=56 Identities=20% Similarity=0.067 Sum_probs=51.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHc-----------CChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHC-----------GLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~l-----------g~~~~A~~dL~~fl~~~~~~~ 362 (364)
+.|+++.|+.+.++.+.++| ++..+..+|.++... |++++|+..++.-++..|+..
T Consensus 51 ~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~~ 118 (217)
T 2pl2_A 51 KLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRYA 118 (217)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCcccH
Confidence 57899999999999999999 577899999999999 999999999999999988753
No 72
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=93.98 E-value=0.12 Score=45.19 Aligned_cols=55 Identities=18% Similarity=0.131 Sum_probs=48.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.+.| ++.-+..+|.++++.|++++|+..++..++..|+.
T Consensus 89 ~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~ 144 (275)
T 1xnf_A 89 QAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPND 144 (275)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC
Confidence 56799999999999999999 57788899999999999999999999988887765
No 73
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=93.92 E-value=0.088 Score=51.36 Aligned_cols=55 Identities=9% Similarity=0.001 Sum_probs=45.1
Q ss_pred CcCC-HHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGD-MRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d-~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+ ++.|+.++++.+.++| ++.-+-.+|.++.++|++.+|+..++..++.-|+.
T Consensus 143 ~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~ 199 (382)
T 2h6f_A 143 SLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKN 199 (382)
T ss_dssp HTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTC
T ss_pred HcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccC
Confidence 4564 8888888888888888 56678888888888888888888888888887764
No 74
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=93.84 E-value=0.06 Score=44.33 Aligned_cols=55 Identities=9% Similarity=-0.066 Sum_probs=49.0
Q ss_pred CcCCHHHHHHHHHHHhcc------------------CCC-hHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILL------------------ESD-AKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL------------------~Pd-p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++.+.+ +|. ...+..+|.+|+++|+|.+|+.+++..++.-|+.
T Consensus 23 ~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~ 96 (162)
T 3rkv_A 23 VQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREETN 96 (162)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred HcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcc
Confidence 578999999999999999 553 4578899999999999999999999999988875
No 75
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=93.83 E-value=0.14 Score=44.68 Aligned_cols=56 Identities=9% Similarity=0.056 Sum_probs=51.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+.+.++.+.+.| ++.-+...|.++.+.|.+++|+..++..++..|+..
T Consensus 55 ~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~ 111 (275)
T 1xnf_A 55 SLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYN 111 (275)
T ss_dssp HTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT
T ss_pred HcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCcccc
Confidence 56799999999999999999 578899999999999999999999999999888753
No 76
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=93.81 E-value=0.042 Score=53.70 Aligned_cols=54 Identities=11% Similarity=0.140 Sum_probs=37.0
Q ss_pred cCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 308 FGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 308 ~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
.|+++.|+.++++.+.++| ++..+..+|.++.++|++++|+.+++..++.-|+.
T Consensus 179 ~g~~~eAl~~~~kal~ldP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~ 233 (382)
T 2h6f_A 179 LRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRN 233 (382)
T ss_dssp HTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTC
T ss_pred ccCHHHHHHHHHHHHHhCccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC
Confidence 3566777777777777777 45566777777777777777777777777666653
No 77
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=93.78 E-value=0.091 Score=46.60 Aligned_cols=56 Identities=16% Similarity=0.026 Sum_probs=49.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHH-----------------HHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKEL-----------------RDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~-----------------RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+...++++.+.| ++... ..+|.+|++.|+|.+|+..++..++..|++.
T Consensus 109 ~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~ 182 (261)
T 3qky_A 109 DQTDTRKAIEAFQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTP 182 (261)
T ss_dssp CCHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTST
T ss_pred cchhHHHHHHHHHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCc
Confidence 47799999999999999999 45433 6889999999999999999999999999864
No 78
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=93.61 E-value=0.13 Score=54.71 Aligned_cols=56 Identities=14% Similarity=0.020 Sum_probs=51.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+.+.++.+.++| ++..+..+|.+|.++|++++|++.++.-++..|+.+
T Consensus 55 ~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~ 111 (723)
T 4gyw_A 55 QQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFA 111 (723)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 67899999999999999999 577899999999999999999999999999988763
No 79
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=93.61 E-value=0.16 Score=43.63 Aligned_cols=52 Identities=13% Similarity=0.130 Sum_probs=45.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHh
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQW 358 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~ 358 (364)
..|+++.|+.+.++.+.+.| ++..+..+|.++.+.|.+.+|+..++..++..
T Consensus 185 ~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~ 237 (258)
T 3uq3_A 185 KLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDAARTKD 237 (258)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC
Confidence 67899999999999999998 47778888999999999999999999888887
No 80
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=93.55 E-value=0.19 Score=40.52 Aligned_cols=55 Identities=9% Similarity=0.063 Sum_probs=49.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++++.+.| ++..+...|.++.+.|++++|...++..++..|+.
T Consensus 88 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 143 (186)
T 3as5_A 88 QVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNE 143 (186)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccc
Confidence 46799999999999999999 57788999999999999999999999999887764
No 81
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=93.54 E-value=0.11 Score=48.11 Aligned_cols=56 Identities=16% Similarity=0.142 Sum_probs=44.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHH-HHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQS-LQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A-~~dL~~fl~~~~~~~ 362 (364)
..|+++.|..+.++.+.++| ++..+..+|.++.+.|.+.++ ...++..++.-|++.
T Consensus 212 ~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~~ 269 (291)
T 3mkr_A 212 AQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHP 269 (291)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCH
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCh
Confidence 67888888888888888888 577788888888888888764 567778888877764
No 82
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=93.52 E-value=0.17 Score=43.41 Aligned_cols=55 Identities=15% Similarity=0.048 Sum_probs=51.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.+.| ++..+..+|.++.+.|++++|+..++..++..|+.
T Consensus 151 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~ 206 (258)
T 3uq3_A 151 TKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF 206 (258)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHH
Confidence 56799999999999999999 67889999999999999999999999999988874
No 83
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=93.43 E-value=0.18 Score=42.20 Aligned_cols=52 Identities=17% Similarity=0.149 Sum_probs=32.1
Q ss_pred cCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhc
Q 017874 308 FGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWY 359 (364)
Q Consensus 308 ~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~ 359 (364)
.|+++.|+...++.+.+.| ++..+...|.++.+.|++++|...++..++..|
T Consensus 126 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 178 (225)
T 2vq2_A 126 QGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVE 178 (225)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 3466666666666666666 355556666666666666666666666666555
No 84
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=93.41 E-value=0.096 Score=48.05 Aligned_cols=55 Identities=15% Similarity=-0.126 Sum_probs=50.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...+..+.++| ++..+..+|.+|.++|+|++|+.+++..++..|+.
T Consensus 16 ~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~ 71 (281)
T 2c2l_A 16 VGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS 71 (281)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTC
T ss_pred HcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC
Confidence 46799999999999999999 67889999999999999999999999998887764
No 85
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=93.35 E-value=0.21 Score=49.81 Aligned_cols=56 Identities=16% Similarity=0.014 Sum_probs=51.4
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+...++.+.++| ++..+..+|.+|+++|++++|+..++..++..|+..
T Consensus 52 ~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~ 108 (477)
T 1wao_1 52 RTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDK 108 (477)
T ss_dssp HTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCT
T ss_pred HhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 46799999999999999999 577889999999999999999999999999988754
No 86
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=93.23 E-value=0.16 Score=42.12 Aligned_cols=55 Identities=16% Similarity=0.089 Sum_probs=49.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHH-HHHcCCh--HHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSIL-LYHCGLY--EQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlL-l~~lg~~--~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.++| ++..+..+|.+ +++.|.+ ++|+..++..++..|+.
T Consensus 56 ~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~ 114 (177)
T 2e2e_A 56 WQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNE 114 (177)
T ss_dssp HTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTC
T ss_pred HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCc
Confidence 46799999999999999999 67788999999 7899999 99999999999988874
No 87
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=93.10 E-value=0.18 Score=46.49 Aligned_cols=55 Identities=16% Similarity=0.145 Sum_probs=41.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.++| ++..+..+|.+|.+.|++++|+..++..++..|+.
T Consensus 111 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 166 (365)
T 4eqf_A 111 ENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALKNWIKQNPKY 166 (365)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCHHH
T ss_pred HCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHHHHHHHhCccc
Confidence 56778888888888887777 46677777888888888888888777777766653
No 88
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=93.00 E-value=0.23 Score=41.53 Aligned_cols=50 Identities=14% Similarity=0.097 Sum_probs=39.4
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHc-CChHHHHHHHHHHHH
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHC-GLYEQSLQYLKFYQA 356 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~l-g~~~~A~~dL~~fl~ 356 (364)
..|+++.|+.+.++.+.+.| ++..+..+|.++... |++++|+..++..++
T Consensus 54 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~ 105 (225)
T 2vq2_A 54 YLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALA 105 (225)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred HcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHc
Confidence 67788888888888888888 466777788888888 888888888777776
No 89
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=92.94 E-value=0.16 Score=43.35 Aligned_cols=55 Identities=13% Similarity=-0.004 Sum_probs=50.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.+.| ++..+..+|.++.+.|++.+|...++..++..|+.
T Consensus 171 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~ 226 (243)
T 2q7f_A 171 NEGMLDEALSQFAAVTEQDPGHADAFYNAGVTYAYKENREKALEMLDKAIDIQPDH 226 (243)
T ss_dssp HHTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHCTTC
T ss_pred HcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHccCHHHHHHHHHHHHccCcch
Confidence 45799999999999999999 57789999999999999999999999999998875
No 90
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=92.94 E-value=0.2 Score=45.03 Aligned_cols=53 Identities=17% Similarity=0.117 Sum_probs=33.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWY 359 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~ 359 (364)
..|+++.|+...++++.+.| ++.-+..+|.++.+.|.+++|+..++..++..|
T Consensus 49 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 102 (359)
T 3ieg_A 49 AMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNP 102 (359)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCC
T ss_pred HccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCC
Confidence 45666666666666666666 355566666666666666666666666665544
No 91
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=92.92 E-value=0.16 Score=44.45 Aligned_cols=55 Identities=7% Similarity=0.008 Sum_probs=47.9
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHH-----------------HHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKEL-----------------RDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~-----------------RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++++...| ++... ...|.+|++.|+|.+|+..++..++..|++
T Consensus 108 ~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~ 180 (225)
T 2yhc_A 108 DPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDT 180 (225)
T ss_dssp CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTS
T ss_pred CcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCC
Confidence 46799999999999999999 45322 467999999999999999999999999986
No 92
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=92.90 E-value=0.19 Score=46.04 Aligned_cols=55 Identities=13% Similarity=0.010 Sum_probs=50.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.+.| ++..+..+|.++.+.|++.+|+..++..++..|+.
T Consensus 263 ~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 263 NGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 67899999999999999999 57788999999999999999999999999988875
No 93
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=92.86 E-value=0.14 Score=53.46 Aligned_cols=56 Identities=11% Similarity=0.014 Sum_probs=52.1
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+...++.+.++| ++..+..+|.+|++.|+|++|+.+++..++..|+..
T Consensus 445 ~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~ 501 (681)
T 2pzi_A 445 DLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGEL 501 (681)
T ss_dssp HHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCS
T ss_pred hcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCh
Confidence 67899999999999999999 577899999999999999999999999999998763
No 94
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=92.83 E-value=0.21 Score=46.06 Aligned_cols=55 Identities=11% Similarity=0.038 Sum_probs=48.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.+.| ++..+..+|.+|.++|++.+|+..++..++..|++
T Consensus 259 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 259 NGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred HcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCccc
Confidence 67899999999999999999 47788889999999999999999999998888775
No 95
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=92.75 E-value=0.2 Score=42.41 Aligned_cols=55 Identities=5% Similarity=0.032 Sum_probs=49.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-Ch----------------HHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DA----------------KELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp----------------~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.+.| ++ .-+..+|.++++.|++++|...++..++..|+.
T Consensus 83 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 83 QTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp HTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred HcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 57899999999999999888 45 678999999999999999999999999988854
No 96
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=92.75 E-value=0.2 Score=47.98 Aligned_cols=54 Identities=13% Similarity=0.089 Sum_probs=40.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|+++.|+.++++++.++| ++..+.-+|.+++++|++++|+..++..++..|+
T Consensus 51 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~ 105 (514)
T 2gw1_A 51 SVGDLKKVVEMSTKALELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDF 105 (514)
T ss_dssp HHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSC
T ss_pred HHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCC
Confidence 56778888888888888887 4566777788888888888888887777766553
No 97
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=92.67 E-value=0.079 Score=48.67 Aligned_cols=54 Identities=13% Similarity=-0.091 Sum_probs=41.4
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
+.|+++.|+...++++.++| ++..+..+|.++.+.|++++|...|+..++..|+
T Consensus 129 ~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~p~ 183 (287)
T 3qou_A 129 QESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTIPLQDQD 183 (287)
T ss_dssp HTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSCGGGCS
T ss_pred hCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhCchhhcc
Confidence 45688888888888888888 5677888888888888888888777766555443
No 98
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=92.60 E-value=0.033 Score=46.84 Aligned_cols=53 Identities=13% Similarity=0.028 Sum_probs=43.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWY 359 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~ 359 (364)
..|+++.|+...++.+.++| ++.-+..+|.++.+.|++++|+..++..++..|
T Consensus 18 ~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p 71 (176)
T 2r5s_A 18 QQGEHAQALNVIQTLSDELQSRGDVKLAKADCLLETKQFELAQELLATIPLEYQ 71 (176)
T ss_dssp HTTCHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGC
T ss_pred HcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHhhhccC
Confidence 56789999999999999998 577888999999999999999888876655544
No 99
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=92.52 E-value=0.3 Score=41.59 Aligned_cols=55 Identities=13% Similarity=-0.058 Sum_probs=46.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++++.+.| ++..+..+|.++.+.|++++|+..++..++..|+.
T Consensus 103 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~ 158 (243)
T 2q7f_A 103 VKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEND 158 (243)
T ss_dssp HTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTC
T ss_pred HhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 67888899999998888888 56778888888999999999988888888877753
No 100
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=92.46 E-value=0.36 Score=45.54 Aligned_cols=55 Identities=16% Similarity=0.209 Sum_probs=51.4
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
+.|+++.|+..+++++.+.| ++..+..+|.++.+.|++++|+..++..++..|+.
T Consensus 307 ~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~ 362 (450)
T 2y4t_A 307 KDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDYETAQEHNEND 362 (450)
T ss_dssp TTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC
T ss_pred HCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcch
Confidence 67899999999999999999 57889999999999999999999999999988875
No 101
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=92.40 E-value=0.29 Score=52.03 Aligned_cols=54 Identities=11% Similarity=0.017 Sum_probs=45.1
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|+++.|+.+.++.+.++| ++..+..+|.+|.++|+|++|.+.++..++..|+
T Consensus 123 ~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~~~~~kal~l~~~ 177 (723)
T 4gyw_A 123 DSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVAD 177 (723)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHHHHHHHHHHhChh
Confidence 56788888888888888888 4677888888888888888888888888877664
No 102
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=92.26 E-value=0.3 Score=43.45 Aligned_cols=54 Identities=11% Similarity=0.027 Sum_probs=50.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|+++.|+.+.++.+.+.| ++..+...|.++.+.|++++|...++..++..|+
T Consensus 218 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~ 272 (327)
T 3cv0_A 218 NGNRPQEALDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVG 272 (327)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTT
T ss_pred HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCc
Confidence 57899999999999999999 5778899999999999999999999999999887
No 103
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=92.20 E-value=0.17 Score=43.99 Aligned_cols=53 Identities=8% Similarity=0.092 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcC-----------ChHHHHHHHHHHHHHhcCcC
Q 017874 310 DMRCALAACERLILLES-DAKELRDYSILLYHCG-----------LYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 310 d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg-----------~~~~A~~dL~~fl~~~~~~~ 362 (364)
.++.|+.+.++.|.++| ++..+...|.+|+.+| ++++|++.++.-++.-|+..
T Consensus 61 ~~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~ 125 (158)
T 1zu2_A 61 MIQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT 125 (158)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH
T ss_pred HHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCH
Confidence 47899999999999999 5778999999999985 89999999999999998753
No 104
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=92.13 E-value=0.26 Score=43.06 Aligned_cols=55 Identities=13% Similarity=0.042 Sum_probs=38.6
Q ss_pred CcCCHHHHHHHHHHHhccCCChHH----HHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLESDAKE----LRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~Pdp~e----~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++.+...+++.. +..+|.++.+.|++++|+..++..++..|+.
T Consensus 49 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~ 107 (272)
T 3u4t_A 49 ELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTR 107 (272)
T ss_dssp HTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCccc
Confidence 667777777777777773334332 6777777777777777777777777776654
No 105
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=92.13 E-value=0.3 Score=44.62 Aligned_cols=55 Identities=15% Similarity=0.086 Sum_probs=45.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.+.| ++..+..+|.++...|++.+|+..++..++..|+.
T Consensus 110 ~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 165 (368)
T 1fch_A 110 ENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAY 165 (368)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTT
T ss_pred HCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCc
Confidence 67888888888888888888 56778888888888888888888888888877765
No 106
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=91.93 E-value=0.35 Score=41.60 Aligned_cols=55 Identities=13% Similarity=0.221 Sum_probs=49.1
Q ss_pred CcCCHHHHHHHHHHHhccCC--ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES--DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P--dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...+..+.+.| ++..+.-+|.++++.|.+++|+..++..++..|+.
T Consensus 19 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~ 75 (228)
T 4i17_A 19 NAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNL 75 (228)
T ss_dssp HTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSH
T ss_pred HccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcch
Confidence 56799999999999999996 46666779999999999999999999999888764
No 107
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=91.91 E-value=0.34 Score=38.68 Aligned_cols=55 Identities=5% Similarity=0.064 Sum_probs=46.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChH-------HHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAK-------ELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~-------e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+..+++.+.++| ++. ..--+|.++..+|+|.+|+..++..++..||-
T Consensus 54 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~~ 116 (127)
T 4gcn_A 54 EEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRDP 116 (127)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCCH
T ss_pred HhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCH
Confidence 56799999999999999998 331 34567899999999999999999998877763
No 108
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=91.84 E-value=0.22 Score=49.64 Aligned_cols=56 Identities=14% Similarity=0.013 Sum_probs=51.5
Q ss_pred cCcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 306 VRFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 306 lr~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
...|+++.|+.+.++.+.++| ++..+..+|.+|.++|+|++|+.+++..++..|+.
T Consensus 17 ~~~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 73 (477)
T 1wao_1 17 FKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKY 73 (477)
T ss_dssp TTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC
T ss_pred HHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC
Confidence 367899999999999999999 57789999999999999999999999999887764
No 109
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=91.80 E-value=0.31 Score=45.00 Aligned_cols=56 Identities=11% Similarity=-0.121 Sum_probs=51.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+.+.++++...| ++..+-.+|.++.++|++++|...|+.-++.-|+.+
T Consensus 178 ~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~~ 234 (291)
T 3mkr_A 178 GGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGHP 234 (291)
T ss_dssp CTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence 45899999999999999999 678899999999999999999999999999988753
No 110
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=91.75 E-value=0.47 Score=40.91 Aligned_cols=55 Identities=9% Similarity=-0.139 Sum_probs=50.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.+.| ++..+.-.+.++.+.|++++|...++..++..|++
T Consensus 187 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~p~~ 242 (252)
T 2ho1_A 187 KEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLYPGS 242 (252)
T ss_dssp HTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred HcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCC
Confidence 56799999999999999999 57788899999999999999999999999998875
No 111
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=91.64 E-value=0.27 Score=41.09 Aligned_cols=50 Identities=10% Similarity=0.002 Sum_probs=30.5
Q ss_pred CcCCHHHHHHHHHHHhccCCC---hHHHHHHhHHHHHcCChHHHHHHHHHHHH
Q 017874 307 RFGDMRCALAACERLILLESD---AKELRDYSILLYHCGLYEQSLQYLKFYQA 356 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~Pd---p~e~RDrGlLl~~lg~~~~A~~dL~~fl~ 356 (364)
..|+++.|+.+.++++.++|+ +.-+...|.++..+|.+++|+..++..+.
T Consensus 120 ~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 120 QVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 556666666666666666663 22456666666666666666666555443
No 112
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=91.60 E-value=0.35 Score=45.58 Aligned_cols=55 Identities=7% Similarity=0.031 Sum_probs=50.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-C---------------hHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-D---------------AKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-d---------------p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.+.| + ...+..+|.+|.++|+|.+|+..++..++..|+.
T Consensus 159 ~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~ 229 (336)
T 1p5q_A 159 KEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNN 229 (336)
T ss_dssp HHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HCCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Confidence 46799999999999999999 4 3688999999999999999999999999998875
No 113
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=91.59 E-value=0.4 Score=42.60 Aligned_cols=56 Identities=11% Similarity=-0.014 Sum_probs=48.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+.+.++.+.+.| ++..+...|.++.+.|.+++|+..++..++..|+..
T Consensus 67 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~ 123 (327)
T 3cv0_A 67 ENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYE 123 (327)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTT
T ss_pred HcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccH
Confidence 67899999999999999998 577788889999999999999999998888877654
No 114
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=91.59 E-value=0.36 Score=48.29 Aligned_cols=55 Identities=7% Similarity=-0.211 Sum_probs=47.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.++| ++..+..+|.+|.+.|++++|++.++..++..|+.
T Consensus 69 ~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 124 (568)
T 2vsy_A 69 TQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEE 124 (568)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 67889999999999999998 57788889999999999999999999888887764
No 115
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=91.58 E-value=0.15 Score=49.43 Aligned_cols=46 Identities=13% Similarity=0.164 Sum_probs=32.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHH
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLK 352 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~ 352 (364)
..|+++.|+.++++.+.++| ++..+..+|.++.++|++.+|+..++
T Consensus 71 ~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~ 117 (537)
T 3fp2_A 71 STGDLEKVIEFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLS 117 (537)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 56677777777777777777 45566677777777777777777665
No 116
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=91.56 E-value=0.31 Score=42.08 Aligned_cols=55 Identities=16% Similarity=0.126 Sum_probs=49.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.+.| ++..+...|.++++.|++++|...++..++..|+.
T Consensus 153 ~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~ 208 (252)
T 2ho1_A 153 QMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQN 208 (252)
T ss_dssp HTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCC
T ss_pred HcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCc
Confidence 35699999999999999999 57788999999999999999999999998877654
No 117
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=91.49 E-value=0.13 Score=44.91 Aligned_cols=55 Identities=18% Similarity=0.097 Sum_probs=36.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.++| ++..+..+|...+..+.+++|+..++..++..|+.
T Consensus 120 ~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~ 175 (272)
T 3u4t_A 120 NKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNI 175 (272)
T ss_dssp HTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred HccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 56677777777777777777 45566667744444557777777777777666653
No 118
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=91.39 E-value=0.5 Score=42.01 Aligned_cols=55 Identities=7% Similarity=-0.197 Sum_probs=35.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.+.| ++..+.-+|.++.+.|++++|...++..++..|+.
T Consensus 137 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~ 192 (330)
T 3hym_B 137 VESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPED 192 (330)
T ss_dssp HHTCHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC
T ss_pred HccCHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCC
Confidence 45666777777777776666 34455556777777777777777666666665543
No 119
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=91.36 E-value=0.1 Score=45.41 Aligned_cols=55 Identities=11% Similarity=0.012 Sum_probs=49.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCCh----------HHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLY----------EQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~----------~~A~~dL~~fl~~~~~~ 361 (364)
+.+.++.|+.+.++.+.++| ++..+--.|.++.+++++ ++|+..|+.-++.-|+.
T Consensus 14 r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~ 79 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKK 79 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred HHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCc
Confidence 45589999999999999999 678888899999999886 59999999999999875
No 120
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=91.17 E-value=0.37 Score=45.43 Aligned_cols=55 Identities=16% Similarity=0.099 Sum_probs=40.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++++.+.| ++.-+..+|.+|.++|++++|+..++..++..|+.
T Consensus 72 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 127 (450)
T 2y4t_A 72 AMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSE 127 (450)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCH
T ss_pred HCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 56777777777777777777 45667777777777777777777777777666653
No 121
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=91.04 E-value=0.44 Score=44.35 Aligned_cols=54 Identities=13% Similarity=0.103 Sum_probs=26.4
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|+++.|+.+.++++.+.| ++..+..+|.++.+.|.+++|+..++..++..|+
T Consensus 283 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~ 337 (388)
T 1w3b_A 283 EKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPE 337 (388)
T ss_dssp HHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTT
T ss_pred HcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCC
Confidence 34455555555555555554 3444444555555555555555555544444443
No 122
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=90.84 E-value=0.28 Score=48.59 Aligned_cols=54 Identities=11% Similarity=-0.012 Sum_probs=50.6
Q ss_pred CcCCH-HHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDM-RCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~-~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|++ +.|+.+.++.+.++| ++..+..+|.+|++.|++++|+..++..++..|+
T Consensus 114 ~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~ 169 (474)
T 4abn_A 114 VTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKN 169 (474)
T ss_dssp SSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCC
T ss_pred hccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence 67899 999999999999999 5789999999999999999999999999988776
No 123
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=90.82 E-value=0.41 Score=42.62 Aligned_cols=55 Identities=11% Similarity=0.039 Sum_probs=45.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcC-ChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCG-LYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg-~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++++..+| ++..+...|.++.+.| .+++|...++..++..|+.
T Consensus 68 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~~~~~~ 124 (330)
T 3hym_B 68 ELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTY 124 (330)
T ss_dssp HHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSCHHHHHHHHHHHHTTCTTC
T ss_pred HhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCcc
Confidence 67788888888888888888 5777888888888888 8888888888888777654
No 124
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=90.80 E-value=0.41 Score=47.90 Aligned_cols=55 Identities=15% Similarity=-0.061 Sum_probs=51.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHc---CChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHC---GLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~l---g~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.++| ++..+..+|.++.+. |.+++|.+.++..++..|+.
T Consensus 103 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 103 DAGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCC
T ss_pred HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCcc
Confidence 78999999999999999999 577899999999999 99999999999999998875
No 125
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=90.37 E-value=0.45 Score=45.43 Aligned_cols=55 Identities=11% Similarity=-0.029 Sum_probs=51.7
Q ss_pred CcCCHHHHHHHHHHHhccCCChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLESDAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~Pdp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++++.++|++..+..+|.++.+.|.+++|+..++..++..|+.
T Consensus 18 ~~g~~~~A~~~~~~al~~~p~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~ 72 (514)
T 2gw1_A 18 RNKKYDDAIKYYNWALELKEDPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDY 72 (514)
T ss_dssp HTSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCC
T ss_pred HhccHHHHHHHHHHHHhcCccHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHH
Confidence 4679999999999999999998899999999999999999999999999998875
No 126
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=90.33 E-value=0.42 Score=44.52 Aligned_cols=55 Identities=13% Similarity=0.039 Sum_probs=50.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++++.+.| ++..+..+|.++.+.|++++|+..++..++..|+.
T Consensus 317 ~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~ 372 (388)
T 1w3b_A 317 EQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTF 372 (388)
T ss_dssp TTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTC
T ss_pred HcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 78999999999999999999 57788999999999999999999999999887764
No 127
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=89.98 E-value=0.33 Score=44.41 Aligned_cols=55 Identities=13% Similarity=0.022 Sum_probs=46.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
+.++.+.|+...++.+.++| ++..+-.+|.+|.+.|++++|+..|+..++.-|+.
T Consensus 197 ~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~ 252 (287)
T 3qou_A 197 XQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTA 252 (287)
T ss_dssp HHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTG
T ss_pred hhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhccccc
Confidence 34456668888889999999 57788999999999999999999999999988875
No 128
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=89.93 E-value=0.29 Score=48.50 Aligned_cols=53 Identities=13% Similarity=-0.071 Sum_probs=48.9
Q ss_pred CCHHHHHHHHHHHhccCC---C-hHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 309 GDMRCALAACERLILLES---D-AKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 309 ~d~~~AL~a~ErLllL~P---d-p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
|+++.|+.+.++.+.++| + +..+..+|.+|++.|+|++|+..++..++..|+.
T Consensus 235 g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 291 (474)
T 4abn_A 235 KISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAW 291 (474)
T ss_dssp HHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred chHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 789999999999999999 5 6689999999999999999999999999988875
No 129
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=89.88 E-value=0.57 Score=46.10 Aligned_cols=55 Identities=18% Similarity=0.117 Sum_probs=52.1
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
+.|+++.|+.+.++++.+.| ++.-+..+|.+|.+.|++++|...++..++..|+.
T Consensus 528 ~~g~~~~A~~~~~~~~~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~ 583 (597)
T 2xpi_A 528 KLKMYDAAIDALNQGLLLSTNDANVHTAIALVYLHKKIPGLAITHLHESLAISPNE 583 (597)
T ss_dssp HTTCHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC
Confidence 78999999999999999999 68899999999999999999999999999998875
No 130
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=89.81 E-value=0.59 Score=45.09 Aligned_cols=52 Identities=10% Similarity=-0.012 Sum_probs=22.4
Q ss_pred cCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhc
Q 017874 308 FGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWY 359 (364)
Q Consensus 308 ~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~ 359 (364)
.|+++.|+.+.++++.+.| ++..+.-+|.++.+.|++++|...++..++..|
T Consensus 357 ~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 409 (537)
T 3fp2_A 357 QGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYDIAKRLEE 409 (537)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHcCC
Confidence 3444444444444444444 233344444444444444444444444444333
No 131
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=89.67 E-value=0.52 Score=46.49 Aligned_cols=55 Identities=5% Similarity=0.001 Sum_probs=50.3
Q ss_pred CcCCHHHHHHHHHHHhccCC-C---------------hHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-D---------------AKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-d---------------p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.++| + ...+..+|.+|+++|+|.+|+.+++..++..|+.
T Consensus 280 ~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~ 350 (457)
T 1kt0_A 280 KGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSAN 350 (457)
T ss_dssp HTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred hCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcc
Confidence 57899999999999999999 4 3578899999999999999999999999998875
No 132
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=89.05 E-value=0.76 Score=47.81 Aligned_cols=56 Identities=9% Similarity=-0.183 Sum_probs=51.2
Q ss_pred cCcCCHHHHHHHHHHHh--------ccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 306 VRFGDMRCALAACERLI--------LLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 306 lr~~d~~~AL~a~ErLl--------lL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
+..|+++.|+.+.++.+ .++| ++..+..+|.++++.|+|++|+..++..++..|+.
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~ 466 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWR 466 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCC
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcch
Confidence 67899999999999999 8999 57789999999999999999999999999998875
No 133
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=88.40 E-value=0.57 Score=44.21 Aligned_cols=56 Identities=11% Similarity=0.020 Sum_probs=49.9
Q ss_pred cCcCCHHHHHHHHHHHhccCCC-h-----------------HHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 306 VRFGDMRCALAACERLILLESD-A-----------------KELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 306 lr~~d~~~AL~a~ErLllL~Pd-p-----------------~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
...|+++.|+.+.++.+.+.|+ + ..+..+|.+|.++|+|.+|+.+++..++..|+.
T Consensus 190 ~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~ 263 (338)
T 2if4_A 190 FKEEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKN 263 (338)
T ss_dssp CSSSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTC
T ss_pred HhcCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 4678999999999999999995 4 267889999999999999999999999988864
No 134
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=87.87 E-value=0.34 Score=46.69 Aligned_cols=55 Identities=4% Similarity=-0.078 Sum_probs=49.0
Q ss_pred CcCCHHHHHHHHHHHhc----------------cCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLIL----------------LES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLll----------------L~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+. +.| ++..+..+|.+|+++|+|++|+.+++.-++..|+.
T Consensus 235 ~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~ 306 (370)
T 1ihg_A 235 KSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSN 306 (370)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC
T ss_pred HhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchh
Confidence 56799999999999998 677 46788999999999999999999999999887764
No 135
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=86.89 E-value=0.78 Score=45.09 Aligned_cols=52 Identities=15% Similarity=0.016 Sum_probs=24.1
Q ss_pred cCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhc
Q 017874 308 FGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWY 359 (364)
Q Consensus 308 ~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~ 359 (364)
.|+++.|+...++++.+.| ++..+.-+|.+|.+.|++++|...++..++..|
T Consensus 420 ~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~ 472 (597)
T 2xpi_A 420 EGEHDQAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQ 472 (597)
T ss_dssp HTCHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC
T ss_pred cCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 4444444444444444444 333444444444444444444444444444433
No 136
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=86.76 E-value=0.98 Score=34.21 Aligned_cols=38 Identities=5% Similarity=-0.122 Sum_probs=33.0
Q ss_pred CC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 325 ES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 325 ~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
+| ++..+-.+|.++++.|+|++|+..++..++..|+..
T Consensus 3 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~ 41 (100)
T 3ma5_A 3 DPEDPFTRYALAQEHLKHDNASRALALFEELVETDPDYV 41 (100)
T ss_dssp --CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT
T ss_pred CccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH
Confidence 57 577899999999999999999999999999988753
No 137
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=86.40 E-value=1 Score=40.91 Aligned_cols=54 Identities=15% Similarity=-0.051 Sum_probs=47.2
Q ss_pred CCHHHHHHHHHHHhccCC-C--h----HHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 309 GDMRCALAACERLILLES-D--A----KELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 309 ~d~~~AL~a~ErLllL~P-d--p----~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
|+++.|+.+.++.+.+.| + + .-+...|.++.++|+|++|+..++.-++..|+..
T Consensus 132 g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~ 192 (292)
T 1qqe_A 132 HDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNR 192 (292)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT
T ss_pred cCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCC
Confidence 799999999999999988 3 2 2467889999999999999999999999887653
No 138
>3isr_A Transglutaminase-like enzymes, putative cysteine; protease, hutchinsoni MCSG, structural genomics; 1.90A {Cytophaga hutchinsonii}
Probab=86.37 E-value=0.85 Score=43.33 Aligned_cols=72 Identities=13% Similarity=0.142 Sum_probs=55.3
Q ss_pred HHHHHHHHHhchhcCCCCCCHHHHHHHHHHHhhhhcCCccCCCCCCcCCcccccHHHHHhhccCChHHHHHHHHHHHHHh
Q 017874 119 QLDDLSVGYCSHYSSGFRSSPESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKML 198 (364)
Q Consensus 119 ~Ld~La~ev~~~l~~~~~~~p~~~l~~Ln~~Ly~~~GF~g~~~~~~Y~dp~Ns~L~~VLe~R~GiPIsL~iIylevArRL 198 (364)
+|.++|.++.. ...++.+++++|++++.++..|..... . ...--..+|+.|+|.+--.+.+++.++|.+
T Consensus 127 ~i~~~A~~~~~-----~~~~~~~~~~ai~~~v~~~~~Y~~~~~--~----~~~~a~~~l~~~~G~C~d~A~l~val~Ra~ 195 (293)
T 3isr_A 127 KLQKLAYKEFG-----KIENVYSKVLAITDWIYNNVEYISGST--N----SQTSAFDTITERAGVCRDFAHLGIALCRAL 195 (293)
T ss_dssp GSHHHHHHHHT-----TCCSHHHHHHHHHHHHHHHSEECTTSC--C----TTCCHHHHHHHCEECHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhc-----cCCCHHHHHHHHHHHHHhhcEEeccCC--C----CCCCHHHhhcCCcEehHHHHHHHHHHHHHC
Confidence 45666666532 234667999999999999888775433 1 112346799999999999999999999999
Q ss_pred CCc
Q 017874 199 RIW 201 (364)
Q Consensus 199 glp 201 (364)
|||
T Consensus 196 GIP 198 (293)
T 3isr_A 196 SIP 198 (293)
T ss_dssp TCC
T ss_pred CCC
Confidence 999
No 139
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=86.15 E-value=1.2 Score=42.31 Aligned_cols=52 Identities=12% Similarity=-0.204 Sum_probs=46.6
Q ss_pred CHHHHHHHHHHHhccCCC-hHHHHHHhHHHHHcC--ChHHHHHHHHHHHHHhcCc
Q 017874 310 DMRCALAACERLILLESD-AKELRDYSILLYHCG--LYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 310 d~~~AL~a~ErLllL~Pd-p~e~RDrGlLl~~lg--~~~~A~~dL~~fl~~~~~~ 361 (364)
.-++||.+++.+|.++|+ ...|--||.++.++| .+++|+..++..+...|.+
T Consensus 48 ~s~~aL~~t~~~L~~nP~~~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk~ 102 (306)
T 3dra_A 48 YSERALHITELGINELASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKN 102 (306)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTTC
T ss_pred CCHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHCccc
Confidence 457899999999999995 558899999999999 9999999999999988875
No 140
>3kd4_A Putative protease; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}
Probab=85.91 E-value=1.4 Score=44.82 Aligned_cols=76 Identities=8% Similarity=0.054 Sum_probs=56.7
Q ss_pred HHHHHHHHHhchhcCCCCCCHHHHHHHHHHHhhhhcCCccCCCCCCcCCcccccHHHHHhhccCChHHHHHHHHHHHHHh
Q 017874 119 QLDDLSVGYCSHYSSGFRSSPESVLESIERYLFDKKGFRRTNARNQLIEPRSLYLHSVLTHRTGSAVMLSLIYSEILKML 198 (364)
Q Consensus 119 ~Ld~La~ev~~~l~~~~~~~p~~~l~~Ln~~Ly~~~GF~g~~~~~~Y~dp~Ns~L~~VLe~R~GiPIsL~iIylevArRL 198 (364)
.+.+++.++. ....++.+++++|-++.-+...|.+... .+......-...||++|.|.+...+.+++.++|.+
T Consensus 229 ~i~~~a~~l~-----~~~~~~~ek~~~iy~~V~~~i~y~~~~~--~~~g~~~~~a~~vl~~~~G~C~d~a~Ll~AllRa~ 301 (506)
T 3kd4_A 229 ESKTFAQFLT-----DKSGNEQEKVNIIRDHILNNLSTCPIPM--AMTGYTVRDIDTVLRSAYGTPLEIAQLLNVMLNAA 301 (506)
T ss_dssp HHHHHHHHHH-----SSCSSHHHHHHHHHHHHHHHCEECCCCG--GGGTTCCCCHHHHHHHTEECHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHH-----hcCCCHHHHHHHHHHHHHhccEecceec--ccCCCCCCCHHHHHHhCCcchHHHHHHHHHHHHHC
Confidence 4455555543 2346788999999999888887765332 22221233488999999999999999999999999
Q ss_pred CCc
Q 017874 199 RIW 201 (364)
Q Consensus 199 glp 201 (364)
|||
T Consensus 302 GIp 304 (506)
T 3kd4_A 302 GIP 304 (506)
T ss_dssp TCC
T ss_pred CCC
Confidence 999
No 141
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=85.73 E-value=1.5 Score=34.02 Aligned_cols=54 Identities=17% Similarity=0.124 Sum_probs=37.7
Q ss_pred CcCCHHHHHHHHHHHhccCCChHH-------HHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILLESDAKE-------LRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~Pdp~e-------~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|+++.|+...+..+.+.+.... ....|.++...|++++|...++..++....
T Consensus 61 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~ 121 (164)
T 3ro3_A 61 FLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 121 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 567888888888877776654452 345677777778888888877777766543
No 142
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=84.68 E-value=0.79 Score=41.71 Aligned_cols=55 Identities=13% Similarity=-0.107 Sum_probs=44.8
Q ss_pred CcCCHHHHHHHHHHHhccCCC-hH-------HHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLESD-AK-------ELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~Pd-p~-------e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+.+.++.+.+.|+ +. .+.-.|+++..+|++.+|...++.+++..|+.
T Consensus 170 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 232 (292)
T 1qqe_A 170 LDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNF 232 (292)
T ss_dssp HTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC----
T ss_pred HhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 568999999999999999984 32 35678999999999999999999998877764
No 143
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=84.41 E-value=1.8 Score=37.19 Aligned_cols=54 Identities=13% Similarity=0.096 Sum_probs=45.6
Q ss_pred CcCCHHHHHHHHHHHhcc--------CCC-hHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILL--------ESD-AKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL--------~Pd-p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|+++.|+.+.++.+.+ .|+ ...+...|.++.+.|++++|...++..++..++
T Consensus 139 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~~~ 201 (283)
T 3edt_B 139 NQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTRAHE 201 (283)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 346999999999999988 442 457889999999999999999999999887543
No 144
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=84.24 E-value=1 Score=38.93 Aligned_cols=54 Identities=17% Similarity=0.146 Sum_probs=46.5
Q ss_pred cCCHHHHHHHHHHHhccC-C-C-hHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 308 FGDMRCALAACERLILLE-S-D-AKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 308 ~~d~~~AL~a~ErLllL~-P-d-p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
.++.++++...|.++..+ | + ..-+--.|+.+|++|+|..|+.+++..++.-|+.
T Consensus 48 ~~~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n 104 (152)
T 1pc2_A 48 NDDIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQN 104 (152)
T ss_dssp HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC
Confidence 348899999999999988 6 3 3456678999999999999999999999999864
No 145
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=83.78 E-value=1.5 Score=39.91 Aligned_cols=56 Identities=9% Similarity=0.023 Sum_probs=44.5
Q ss_pred CcCCHHHHHHHHHHHhcc---CCC--hHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILL---ESD--AKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL---~Pd--p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
+.|++++|+.+.++.+.. .|+ ...+..++.++.+.|+++.|...++..++.+|++.
T Consensus 215 ~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~~~a~~~~p~~~ 275 (308)
T 2ond_A 215 HLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTAFREEY 275 (308)
T ss_dssp TTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHTTTTT
T ss_pred HCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHccccc
Confidence 668889999999988885 442 33677778888888999999888888888888743
No 146
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=83.48 E-value=1.3 Score=42.05 Aligned_cols=56 Identities=11% Similarity=-0.067 Sum_probs=47.4
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..++++.|..+.+..+.+.| ++..+..+|.+|.+.|.+..|+..++..++..|+.+
T Consensus 225 ~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~ 281 (472)
T 4g1t_A 225 EGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLKKALEYIPNNA 281 (472)
T ss_dssp -----CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred hhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCChH
Confidence 35688899999999999999 577899999999999999999999999999988864
No 147
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=83.44 E-value=1.6 Score=43.07 Aligned_cols=53 Identities=11% Similarity=0.029 Sum_probs=47.3
Q ss_pred cCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 308 FGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 308 ~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
.|++++|..+.|+++...| ++..|..+|-++.+.|.++.|..-++..++..|+
T Consensus 25 ~~~~~~a~~~~e~al~~~P~~~~~w~~~~~~~~~~~~~~~a~~~~~ral~~~p~ 78 (530)
T 2ooe_A 25 NQPIDKARKTYERLVAQFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLH 78 (530)
T ss_dssp SSCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTCCC
T ss_pred hCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCC
Confidence 5789999999999999999 5778999999999999999999999999888874
No 148
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=83.09 E-value=2.8 Score=38.30 Aligned_cols=55 Identities=11% Similarity=-0.008 Sum_probs=46.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChH------HHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLES-DAK------ELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~------e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|+++.|+.+.++.+.+.| .+. ...-.|+++..+|++.+|+..++.++ ..|+..
T Consensus 167 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~~ 228 (307)
T 2ifu_A 167 RQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGFS 228 (307)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTST
T ss_pred HcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCCC
Confidence 67899999999999999999 432 45667888889999999999999999 777653
No 149
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=83.07 E-value=2.5 Score=32.56 Aligned_cols=54 Identities=7% Similarity=-0.020 Sum_probs=46.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-C--h----HHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILLES-D--A----KELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-d--p----~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|+++.|+...++.+.+.+ . + ....-.|.++.+.|.+.+|...++..++....
T Consensus 101 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 101 LLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 67899999999999999987 3 1 24778899999999999999999999887654
No 150
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=82.42 E-value=2.5 Score=39.22 Aligned_cols=52 Identities=21% Similarity=0.228 Sum_probs=43.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-Ch----HHHHHHhHHHHHcCChHHHHHHHHHHHHHh
Q 017874 307 RFGDMRCALAACERLILLES-DA----KELRDYSILLYHCGLYEQSLQYLKFYQAQW 358 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp----~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~ 358 (364)
..|+++.|+...++.+.+.| ++ ..+..+|.++++.|++++|...++..++..
T Consensus 60 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 116 (411)
T 4a1s_A 60 NAGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLA 116 (411)
T ss_dssp HTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HhCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 46799999999999999998 55 357889999999999999999888877653
No 151
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=81.89 E-value=3.8 Score=40.46 Aligned_cols=51 Identities=18% Similarity=0.214 Sum_probs=42.1
Q ss_pred CcCCHHHHHHHHHHHhcc-----CC-ChH---HHHHHhHHHHHcCChHHHHHHHHHHHHH
Q 017874 307 RFGDMRCALAACERLILL-----ES-DAK---ELRDYSILLYHCGLYEQSLQYLKFYQAQ 357 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL-----~P-dp~---e~RDrGlLl~~lg~~~~A~~dL~~fl~~ 357 (364)
..|+|+.|+...++.|.+ .| ||. ..-..|.+|.+.|+|++|...++.-++.
T Consensus 341 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 341 NLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 468999999999988843 45 664 6889999999999999999888776654
No 152
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=81.55 E-value=2.5 Score=38.49 Aligned_cols=55 Identities=11% Similarity=0.002 Sum_probs=43.7
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChH-HHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLES-DAK-ELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~-e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|..+.++.+.+.| ++. .+-.+|.++.+.|.+++|...++.-++..|+.
T Consensus 111 ~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~ 167 (308)
T 2ond_A 111 SRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR 167 (308)
T ss_dssp HTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCC
T ss_pred hcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCC
Confidence 56788888888888888888 565 68888888888888888888888877766653
No 153
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=81.38 E-value=0.1 Score=39.20 Aligned_cols=46 Identities=13% Similarity=0.185 Sum_probs=38.0
Q ss_pred CcCCHHHHHHHHHHHhccCCC-------hHHHHHHhHHHHHcCChHHHHHHHH
Q 017874 307 RFGDMRCALAACERLILLESD-------AKELRDYSILLYHCGLYEQSLQYLK 352 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~Pd-------p~e~RDrGlLl~~lg~~~~A~~dL~ 352 (364)
..|+++.|+.++++.+.++|+ +.....+|.++..+|.+++|+.+++
T Consensus 50 ~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 102 (111)
T 2l6j_A 50 KLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVD 102 (111)
T ss_dssp HTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSS
T ss_pred HhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHH
Confidence 678999999999999999994 4467778888888888887766544
No 154
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=81.24 E-value=3.1 Score=35.59 Aligned_cols=51 Identities=24% Similarity=0.330 Sum_probs=43.6
Q ss_pred CcCCHHHHHHHHHHHhccC--------CC-hHHHHHHhHHHHHcCChHHHHHHHHHHHHH
Q 017874 307 RFGDMRCALAACERLILLE--------SD-AKELRDYSILLYHCGLYEQSLQYLKFYQAQ 357 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~--------Pd-p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~ 357 (364)
..|+++.|+...++.+.+. |+ ...+...|.+++..|++++|...++..++.
T Consensus 97 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 156 (283)
T 3edt_B 97 KRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEI 156 (283)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 3569999999999999883 42 457899999999999999999999998877
No 155
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=81.11 E-value=3.5 Score=36.00 Aligned_cols=51 Identities=16% Similarity=0.212 Sum_probs=32.2
Q ss_pred CcCCHHHHHHHHHHHhccCC-Ch----HHHHHHhHHHHHcCChHHHHHHHHHHHHH
Q 017874 307 RFGDMRCALAACERLILLES-DA----KELRDYSILLYHCGLYEQSLQYLKFYQAQ 357 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp----~e~RDrGlLl~~lg~~~~A~~dL~~fl~~ 357 (364)
..|+++.|+...++.+.+.| ++ ..+..+|.++++.|.+++|...++..++.
T Consensus 17 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 72 (338)
T 3ro2_A 17 KSGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTL 72 (338)
T ss_dssp HTTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34567777777777776666 33 24556677777777777776666655544
No 156
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=81.01 E-value=3.2 Score=36.24 Aligned_cols=54 Identities=13% Similarity=0.067 Sum_probs=45.3
Q ss_pred CcCCHHHHHHHHHHHhcc--------CC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILL--------ES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL--------~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|+++.|+.+.++.+.+ .| ....+...|.++.+.|++++|...++..++..++
T Consensus 165 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 227 (311)
T 3nf1_A 165 NQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILTRAHE 227 (311)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 356999999999999988 44 2457888999999999999999999999886543
No 157
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=80.88 E-value=4.8 Score=39.95 Aligned_cols=51 Identities=16% Similarity=-0.023 Sum_probs=41.7
Q ss_pred CcCCHHHHHHHHHHHhc-----cCC-ChH---HHHHHhHHHHHcCChHHHHHHHHHHHHH
Q 017874 307 RFGDMRCALAACERLIL-----LES-DAK---ELRDYSILLYHCGLYEQSLQYLKFYQAQ 357 (364)
Q Consensus 307 r~~d~~~AL~a~ErLll-----L~P-dp~---e~RDrGlLl~~lg~~~~A~~dL~~fl~~ 357 (364)
..|+|+.|+...++.|. +-| +|. ..-..|.+|.+.|.|++|...++.-++.
T Consensus 352 ~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i 411 (433)
T 3qww_A 352 YMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAI 411 (433)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 46899999999998874 345 564 6889999999999999999888776654
No 158
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=78.35 E-value=4 Score=40.11 Aligned_cols=54 Identities=11% Similarity=-0.127 Sum_probs=48.3
Q ss_pred CcCCHHHHHHHHHHHhccCCChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILLESDAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~Pdp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
-.|+++.|+...+|.+.|+|+...+=-+|.++.-.|++++|++.++.-+..-|.
T Consensus 289 ~~gd~d~A~~~l~rAl~Ln~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~ 342 (372)
T 3ly7_A 289 VKGKTDESYQAINTGIDLEMSWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPG 342 (372)
T ss_dssp HHTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCS
T ss_pred hCCCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC
Confidence 358999999999999999998767778899999999999999999988877764
No 159
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=77.84 E-value=3.2 Score=36.29 Aligned_cols=36 Identities=11% Similarity=0.076 Sum_probs=30.5
Q ss_pred CC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 325 ES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 325 ~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
.| .+..+...|.+|.+.|++++|...++..++..|.
T Consensus 274 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~~~ 310 (311)
T 3nf1_A 274 SPTVTTTLKNLGALYRRQGKFEAAETLEEAAMRSRKQ 310 (311)
T ss_dssp CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC-
T ss_pred CchHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHhhc
Confidence 45 3557889999999999999999999999988764
No 160
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=77.71 E-value=3.9 Score=35.71 Aligned_cols=54 Identities=17% Similarity=0.069 Sum_probs=43.9
Q ss_pred CcCCHHHHHHHHHHHhccCC---C----hHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILLES---D----AKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P---d----p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|+++.|+...++.+.+.+ + ...+...|.++...|.+++|...++..++..+.
T Consensus 55 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 115 (338)
T 3ro2_A 55 YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE 115 (338)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 45699999999998887732 2 346889999999999999999999988877654
No 161
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=76.98 E-value=4.4 Score=39.31 Aligned_cols=49 Identities=8% Similarity=-0.029 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHhccCCC-hHHHHHHhHHHHHc-C-ChHHHHHHHHHHHHHh
Q 017874 310 DMRCALAACERLILLESD-AKELRDYSILLYHC-G-LYEQSLQYLKFYQAQW 358 (364)
Q Consensus 310 d~~~AL~a~ErLllL~Pd-p~e~RDrGlLl~~l-g-~~~~A~~dL~~fl~~~ 358 (364)
+++.+|..++.+|..+|. ...|--||.++.++ + .+.++++.++..++.-
T Consensus 104 ~l~eEL~~~~~~L~~nPKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~~d 155 (349)
T 3q7a_A 104 SLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRISPQDPVSEIEYIHGSLLPD 155 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHCCSCCHHHHHHHHHHTSSC
T ss_pred hHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhC
Confidence 455666666666666663 33555555555555 5 5555555544444433
No 162
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=76.33 E-value=1.8 Score=44.34 Aligned_cols=51 Identities=8% Similarity=0.116 Sum_probs=44.2
Q ss_pred CHHHHHHHHHHHhccCCC-hHHHHHHhHHHHHcC-ChHHHHHHHHHHHHHhcC
Q 017874 310 DMRCALAACERLILLESD-AKELRDYSILLYHCG-LYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 310 d~~~AL~a~ErLllL~Pd-p~e~RDrGlLl~~lg-~~~~A~~dL~~fl~~~~~ 360 (364)
+|+.|+.++++++.++|. ...|--||.++.++| .+++|+++.+..++..|.
T Consensus 124 ~~~~el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~ 176 (567)
T 1dce_A 124 NWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFS 176 (567)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCC
T ss_pred cHHHHHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCC
Confidence 789999999999999995 568999999999999 899998888777766553
No 163
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=76.28 E-value=5.5 Score=36.24 Aligned_cols=50 Identities=16% Similarity=0.198 Sum_probs=30.6
Q ss_pred cCCHHHHHHHHHHHhccCC-Ch----HHHHHHhHHHHHcCChHHHHHHHHHHHHH
Q 017874 308 FGDMRCALAACERLILLES-DA----KELRDYSILLYHCGLYEQSLQYLKFYQAQ 357 (364)
Q Consensus 308 ~~d~~~AL~a~ErLllL~P-dp----~e~RDrGlLl~~lg~~~~A~~dL~~fl~~ 357 (364)
.|+++.|+...++.+.+.| ++ ..+..+|.++++.|.++.|+..++..++.
T Consensus 22 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 76 (406)
T 3sf4_A 22 SGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTL 76 (406)
T ss_dssp TTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 4566666666666666666 33 23556666666666666666666655443
No 164
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=76.03 E-value=4.8 Score=36.66 Aligned_cols=21 Identities=10% Similarity=-0.040 Sum_probs=18.6
Q ss_pred cCcCCHHHHHHHHHHHhccCCC
Q 017874 306 VRFGDMRCALAACERLILLESD 327 (364)
Q Consensus 306 lr~~d~~~AL~a~ErLllL~Pd 327 (364)
+..|+++.|+.+.++.+ +.|+
T Consensus 206 ~~~g~~~~A~~~~~~al-~~p~ 226 (307)
T 2ifu_A 206 LHRADYVAAQKCVRESY-SIPG 226 (307)
T ss_dssp HHTTCHHHHHHHHHHHT-TSTT
T ss_pred HHcCCHHHHHHHHHHHh-CCCC
Confidence 35689999999999999 9994
No 165
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=74.98 E-value=8.7 Score=38.66 Aligned_cols=51 Identities=14% Similarity=0.074 Sum_probs=41.1
Q ss_pred CcCCHHHHHHHHHHHhc-----cCC-ChH---HHHHHhHHHHHcCChHHHHHHHHHHHHH
Q 017874 307 RFGDMRCALAACERLIL-----LES-DAK---ELRDYSILLYHCGLYEQSLQYLKFYQAQ 357 (364)
Q Consensus 307 r~~d~~~AL~a~ErLll-----L~P-dp~---e~RDrGlLl~~lg~~~~A~~dL~~fl~~ 357 (364)
..|+|+.|+...++.|. +.| ||. ..-..|.+|.+.|.|++|...++.-++.
T Consensus 363 ~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i 422 (490)
T 3n71_A 363 YLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAI 422 (490)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 56899999998888774 345 564 6889999999999999999887766653
No 166
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=73.90 E-value=6 Score=37.95 Aligned_cols=52 Identities=8% Similarity=0.139 Sum_probs=46.2
Q ss_pred CCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCC-hHHHHHHHHHHHHHhcC
Q 017874 309 GDMRCALAACERLILLES-DAKELRDYSILLYHCGL-YEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 309 ~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~-~~~A~~dL~~fl~~~~~ 360 (364)
.+++.++.++++++.++| +...|--||.++.++|. ++++++..+..++..|.
T Consensus 124 ~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~ 177 (331)
T 3dss_A 124 PNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFS 177 (331)
T ss_dssp CCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSC
T ss_pred ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCC
Confidence 369999999999999999 45689999999999999 59999999999887764
No 167
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=73.38 E-value=4.7 Score=33.02 Aligned_cols=52 Identities=10% Similarity=0.078 Sum_probs=43.2
Q ss_pred CcCCHHHHHHHHHHHhccC------C-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHh
Q 017874 307 RFGDMRCALAACERLILLE------S-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQW 358 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~------P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~ 358 (364)
..|+++.|+...++.+.+. | ...-+...|.++...|++++|...++..++..
T Consensus 38 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 96 (203)
T 3gw4_A 38 FMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELL 96 (203)
T ss_dssp HTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 4679999999999988843 2 23468899999999999999999999888763
No 168
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=73.37 E-value=5.4 Score=36.83 Aligned_cols=52 Identities=15% Similarity=0.094 Sum_probs=44.2
Q ss_pred CcCCHHHHHHHHHHHhcc------CC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHh
Q 017874 307 RFGDMRCALAACERLILL------ES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQW 358 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL------~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~ 358 (364)
..|+++.|+...++.+.+ .| ...-+..+|.++++.|++.+|+..++..++..
T Consensus 98 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 156 (411)
T 4a1s_A 98 YLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTLA 156 (411)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Confidence 467999999999999888 34 24578999999999999999999999887764
No 169
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=72.80 E-value=9 Score=35.55 Aligned_cols=54 Identities=19% Similarity=0.164 Sum_probs=46.1
Q ss_pred CcCCHHHHHHHHHHHhc-----cCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLIL-----LES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLll-----L~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|+++.|+...+..+. -.| .+......|.++++.|.+++|...++.-++..+.
T Consensus 234 ~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 234 RSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 56799999999999998 556 3557889999999999999999999998887653
No 170
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=72.69 E-value=6.6 Score=35.72 Aligned_cols=54 Identities=17% Similarity=0.069 Sum_probs=44.3
Q ss_pred CcCCHHHHHHHHHHHhccCC---C----hHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILLES---D----AKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P---d----p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|+++.|+...++.+.+.+ + ...+..+|.++...|++++|+..++..++..+.
T Consensus 59 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 119 (406)
T 3sf4_A 59 YLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE 119 (406)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Confidence 45799999999998887742 2 346888999999999999999999988877654
No 171
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=72.60 E-value=4.3 Score=28.66 Aligned_cols=36 Identities=17% Similarity=0.238 Sum_probs=31.8
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcC
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCG 342 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg 342 (364)
..|+++.|+...++.+.++| ++..+..+|.++.+.|
T Consensus 55 ~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 55 KQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHC
T ss_pred HHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhcC
Confidence 57899999999999999999 6778888999988765
No 172
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=72.50 E-value=5.7 Score=37.47 Aligned_cols=51 Identities=10% Similarity=-0.014 Sum_probs=43.4
Q ss_pred CCHHHHHHHHHHHhccCCC-hHHHHHHhHHHHHcCChH--HHHHHHHHHHHHhc
Q 017874 309 GDMRCALAACERLILLESD-AKELRDYSILLYHCGLYE--QSLQYLKFYQAQWY 359 (364)
Q Consensus 309 ~d~~~AL~a~ErLllL~Pd-p~e~RDrGlLl~~lg~~~--~A~~dL~~fl~~~~ 359 (364)
++++.+|.+++.++..+|. ..-|--||.++.++|.++ ++++..+..++.-|
T Consensus 124 ~~~~~EL~~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~ 177 (306)
T 3dra_A 124 FDPYREFDILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDL 177 (306)
T ss_dssp CCTHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCC
Confidence 6889999999999999994 558888999999999988 88888888887655
No 173
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=71.95 E-value=4.3 Score=39.93 Aligned_cols=53 Identities=11% Similarity=-0.109 Sum_probs=43.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhc
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWY 359 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~ 359 (364)
..|+++.|..+.|+.+...| ++..+..+|.++.+.|.+..|...++..+...|
T Consensus 403 ~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~ 456 (530)
T 2ooe_A 403 CSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGS 456 (530)
T ss_dssp HTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCC
T ss_pred HcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhccC
Confidence 36788888888888888888 577788888888888888888888888887654
No 174
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=71.95 E-value=6.5 Score=37.14 Aligned_cols=54 Identities=19% Similarity=0.189 Sum_probs=43.9
Q ss_pred CcCCHHHHHHHHHHHhcc---------CCC-hHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILL---------ESD-AKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL---------~Pd-p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|+++.|+.+.+..+.+ .|+ ...+-.+|.+|+++|++.+|..+++..++..+.
T Consensus 63 ~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~ 126 (472)
T 4g1t_A 63 LKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEK 126 (472)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHh
Confidence 468999999999988876 232 235678999999999999999999988876553
No 175
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=71.55 E-value=7.8 Score=29.66 Aligned_cols=56 Identities=16% Similarity=-0.015 Sum_probs=44.2
Q ss_pred CcCCHHHHHHHHHHHhccC-------CC-hHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 307 RFGDMRCALAACERLILLE-------SD-AKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~-------Pd-p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
..|++.+|..-.+..+... ++ +.-..-.|..++++|.+..|+..++.-++.-|++.
T Consensus 17 ~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~ 80 (104)
T 2v5f_A 17 TEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ 80 (104)
T ss_dssp HTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred HccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence 4568999988888777654 12 34567889999999999999999999988888763
No 176
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=70.90 E-value=7.7 Score=36.45 Aligned_cols=54 Identities=7% Similarity=-0.103 Sum_probs=46.9
Q ss_pred CcCCHHHHHHHHHHHhccC--CC--hHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILLE--SD--AKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~--Pd--p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
+.|+++.|+.+.++.+.-. |. +.-+--+|+++.++|+.++|...|+.-++..|+
T Consensus 183 ~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 183 NLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC
T ss_pred HCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc
Confidence 5679999999999998655 52 346789999999999999999999999998886
No 177
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=70.41 E-value=12 Score=34.69 Aligned_cols=53 Identities=13% Similarity=0.059 Sum_probs=44.2
Q ss_pred CcCCHHHHHHHHHHHhcc-----C-CC-hHHHHHHhHHHHHcCChHHHHHHHHHHHHHhc
Q 017874 307 RFGDMRCALAACERLILL-----E-SD-AKELRDYSILLYHCGLYEQSLQYLKFYQAQWY 359 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL-----~-Pd-p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~ 359 (364)
..|+++.|+...+..+.+ + |. +.-....|.++.+.|.+++|...++..++..+
T Consensus 236 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 236 SQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 578999999999999884 4 42 45788999999999999999999988877653
No 178
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=69.89 E-value=10 Score=30.86 Aligned_cols=53 Identities=17% Similarity=0.130 Sum_probs=43.8
Q ss_pred CcCCHHHHHHHHHHHhccCC---ChH----HHHHHhHHHHHcCChHHHHHHHHHHHHHhc
Q 017874 307 RFGDMRCALAACERLILLES---DAK----ELRDYSILLYHCGLYEQSLQYLKFYQAQWY 359 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P---dp~----e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~ 359 (364)
..|+++.|+...+..+.+.+ ++. -....|.++.+.|++++|...++.-++...
T Consensus 119 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 178 (203)
T 3gw4_A 119 HFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIFA 178 (203)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHH
Confidence 57899999999999887754 332 257899999999999999999998887654
No 179
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=69.78 E-value=12 Score=31.20 Aligned_cols=54 Identities=22% Similarity=0.239 Sum_probs=41.7
Q ss_pred CcCCHHHHHHHHHHHhccCCChHHHHH----HhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLESDAKELRD----YSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~Pdp~e~RD----rGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
...|.++++...|-++.-. +|...|| .|+-+|++|.|..|+..++.+++.-|+.
T Consensus 50 ~~~d~~~GI~lLe~l~~~~-~p~~~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n 107 (126)
T 1nzn_A 50 YNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQN 107 (126)
T ss_dssp SHHHHHHHHHHHHHHTTTS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred CHHHHHHHHHHHHHHHhcC-CcchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCC
Confidence 3446777888888776643 2445555 6889999999999999999999998863
No 180
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=69.37 E-value=2.9 Score=39.46 Aligned_cols=48 Identities=6% Similarity=-0.104 Sum_probs=26.3
Q ss_pred CcCCHHHHHHHHHHHhccCCChH----HHHHHhHHHHHcCChHHHHHHHHHHH
Q 017874 307 RFGDMRCALAACERLILLESDAK----ELRDYSILLYHCGLYEQSLQYLKFYQ 355 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~Pdp~----e~RDrGlLl~~lg~~~~A~~dL~~fl 355 (364)
+.|+|+.|+...+..+... ||. -.--.|.++.++|++++|+..|+.-+
T Consensus 147 ~~~r~~dA~~~l~~a~~~~-d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~ 198 (282)
T 4f3v_A 147 AAERWTDVIDQVKSAGKWP-DKFLAGAAGVAHGVAAANLALFTEAERRLTEAN 198 (282)
T ss_dssp HTTCHHHHHHHHTTGGGCS-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHhhccC-CcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHh
Confidence 5566666666666444332 221 23445666666666666666665543
No 181
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=68.52 E-value=14 Score=32.96 Aligned_cols=49 Identities=18% Similarity=0.105 Sum_probs=26.8
Q ss_pred CHHHHHHHHHHHh---ccCCC-h----HHHHHHhHHHHHcCChHHHHHHHHHHHHHh
Q 017874 310 DMRCALAACERLI---LLESD-A----KELRDYSILLYHCGLYEQSLQYLKFYQAQW 358 (364)
Q Consensus 310 d~~~AL~a~ErLl---lL~Pd-p----~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~ 358 (364)
+++.|+...+..+ ...|+ + .-....|.+|++.|.|++|+..++.-++..
T Consensus 170 ~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 170 YLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 5666666666555 22332 1 244556666666666666666666555443
No 182
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=68.27 E-value=7.8 Score=35.52 Aligned_cols=55 Identities=15% Similarity=-0.038 Sum_probs=42.8
Q ss_pred CcCCHHHHHHHHHHHhccCCC--h----HHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILLESD--A----KELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~Pd--p----~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...++.+.+.|. + .-....|.++...|++++|...++..++..++.
T Consensus 147 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~ 207 (373)
T 1hz4_A 147 AWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLLGNG 207 (373)
T ss_dssp HTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS
T ss_pred HhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcc
Confidence 678888888888888888772 2 246678888888888888888888887776543
No 183
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=68.16 E-value=6.3 Score=40.26 Aligned_cols=52 Identities=13% Similarity=0.004 Sum_probs=46.5
Q ss_pred CHHHHHHHHHHHhccCCC-hHHHHHHhHHHHHcCC----------hHHHHHHHHHHHHHhcCc
Q 017874 310 DMRCALAACERLILLESD-AKELRDYSILLYHCGL----------YEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 310 d~~~AL~a~ErLllL~Pd-p~e~RDrGlLl~~lg~----------~~~A~~dL~~fl~~~~~~ 361 (364)
--++|+.+++.++.++|+ ...|--||.++.++|. +++|+..++..++..|..
T Consensus 44 ~~eeal~~~~~~l~~nP~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~pK~ 106 (567)
T 1dce_A 44 LDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKS 106 (567)
T ss_dssp CSHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred CCHHHHHHHHHHHHHCchhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCCCC
Confidence 446899999999999996 5589999999999999 999999999999988865
No 184
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=68.05 E-value=14 Score=33.09 Aligned_cols=51 Identities=8% Similarity=-0.138 Sum_probs=41.8
Q ss_pred cCCHHHHHHHHHHHhccCC-C------hHHHHHHhHHHHHcC-ChHHHHHHHHHHHHHh
Q 017874 308 FGDMRCALAACERLILLES-D------AKELRDYSILLYHCG-LYEQSLQYLKFYQAQW 358 (364)
Q Consensus 308 ~~d~~~AL~a~ErLllL~P-d------p~e~RDrGlLl~~lg-~~~~A~~dL~~fl~~~ 358 (364)
.|+++.|+...+..+.+.+ . ....-..|.++.++| .+++|+..++.-++.+
T Consensus 209 ~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 209 DSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 4599999999999998875 2 346888999999999 5799999988776543
No 185
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=66.65 E-value=9.9 Score=34.01 Aligned_cols=53 Identities=17% Similarity=0.110 Sum_probs=41.9
Q ss_pred cCCHHHHHHHHHHHhccC----CC----hHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 308 FGDMRCALAACERLILLE----SD----AKELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 308 ~~d~~~AL~a~ErLllL~----Pd----p~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
.|+++.|+...+..+.+. .+ ..-.-..|.+|+++|.|++|+..++.-++..++
T Consensus 168 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~ 228 (293)
T 3u3w_A 168 NGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCR 228 (293)
T ss_dssp TTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 348999999999888421 12 236789999999999999999999988877654
No 186
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=65.68 E-value=9.1 Score=37.08 Aligned_cols=53 Identities=11% Similarity=0.100 Sum_probs=47.2
Q ss_pred cCcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHh
Q 017874 306 VRFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQW 358 (364)
Q Consensus 306 lr~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~ 358 (364)
+..|+++.|+..+++++..+| +-..++..=..|+++|+..+|+.-++.|-+.+
T Consensus 182 l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L 235 (388)
T 2ff4_A 182 IACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTL 235 (388)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 356799999999999999999 77788888899999999999999998887765
No 187
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=64.91 E-value=12 Score=33.40 Aligned_cols=51 Identities=10% Similarity=-0.110 Sum_probs=40.2
Q ss_pred CcCCHHHHHHHHHHHhccCCC-------hHHHHHHhHHHHHcCChHHH-HHHHHHHHHH
Q 017874 307 RFGDMRCALAACERLILLESD-------AKELRDYSILLYHCGLYEQS-LQYLKFYQAQ 357 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~Pd-------p~e~RDrGlLl~~lg~~~~A-~~dL~~fl~~ 357 (364)
..|+++.|+...++.+.+.++ ....-..|.++..+|++++| ...++.-++.
T Consensus 208 ~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~ 266 (293)
T 2qfc_A 208 LDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFF 266 (293)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 345999999999999888652 34578899999999999999 6657665543
No 188
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=61.81 E-value=10 Score=35.14 Aligned_cols=55 Identities=11% Similarity=-0.045 Sum_probs=46.4
Q ss_pred CcCCHHHHHHHHHHHhcc---CCC-h---HHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 307 RFGDMRCALAACERLILL---ESD-A---KELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL---~Pd-p---~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
..|+++.|+...+..+.+ .|| + .-....|.++++.|.+..|+..++.-++.++..
T Consensus 115 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~ 176 (383)
T 3ulq_A 115 DQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEH 176 (383)
T ss_dssp HTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC
T ss_pred HhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC
Confidence 467999999999999988 343 2 368899999999999999999999988876654
No 189
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=61.72 E-value=8 Score=33.77 Aligned_cols=53 Identities=15% Similarity=0.031 Sum_probs=46.4
Q ss_pred cCCHHHHHHHHHHHhccCCChHHHHHHhHHHHH----cCChHHHHHHHHHHHHHhcCc
Q 017874 308 FGDMRCALAACERLILLESDAKELRDYSILLYH----CGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 308 ~~d~~~AL~a~ErLllL~Pdp~e~RDrGlLl~~----lg~~~~A~~dL~~fl~~~~~~ 361 (364)
.++++.|+...++.+.+.| +......|.+|.+ .+++++|+..++.-++.-|+.
T Consensus 199 ~~~~~~A~~~~~~a~~~~~-~~a~~~l~~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~ 255 (273)
T 1ouv_A 199 TKNFKEALARYSKACELEN-GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKG 255 (273)
T ss_dssp CCCHHHHHHHHHHHHHTTC-HHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHTCHH
T ss_pred CccHHHHHHHHHHHHhCCC-HHHHHHHHHHHHcCCCcccCHHHHHHHHHHHHHcCCHH
Confidence 6899999999999998876 5667889999999 999999999999988877654
No 190
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=60.29 E-value=16 Score=33.29 Aligned_cols=54 Identities=13% Similarity=0.073 Sum_probs=37.6
Q ss_pred CcCCHHHHHHHHHHHhccCC-C--hHH----HHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILLES-D--AKE----LRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-d--p~e----~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|+++.|+...++.+.+.| . +.. ...+|.++...|++.+|...++.-++..+.
T Consensus 65 ~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~ 125 (373)
T 1hz4_A 65 CKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINE 125 (373)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 46777888888877777776 2 232 356777788888888888777777766543
No 191
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=56.89 E-value=25 Score=30.52 Aligned_cols=49 Identities=10% Similarity=0.022 Sum_probs=36.1
Q ss_pred cCCHHHHHHHHHHHhccCCChHHHHHHhHHHHH----cCChHHHHHHHHHHHHH
Q 017874 308 FGDMRCALAACERLILLESDAKELRDYSILLYH----CGLYEQSLQYLKFYQAQ 357 (364)
Q Consensus 308 ~~d~~~AL~a~ErLllL~Pdp~e~RDrGlLl~~----lg~~~~A~~dL~~fl~~ 357 (364)
.++++.|+...++.+.+. ++......|.+|.+ .|++++|+..++.-++.
T Consensus 91 ~~~~~~A~~~~~~a~~~~-~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~ 143 (273)
T 1ouv_A 91 SQNTNKALQYYSKACDLK-YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDL 143 (273)
T ss_dssp CCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHcC-CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhc
Confidence 677788887777777664 56667777888877 78888887777766654
No 192
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=56.65 E-value=21 Score=34.17 Aligned_cols=50 Identities=10% Similarity=0.055 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCC--hHHHHHHHHHHHHHhcC
Q 017874 311 MRCALAACERLILLES-DAKELRDYSILLYHCGL--YEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 311 ~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~--~~~A~~dL~~fl~~~~~ 360 (364)
++.+|.+++.++..+| ++..|--||.++.++|. +++++..++..++.-|.
T Consensus 90 l~~EL~~~~~~L~~~PKny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dpr 142 (331)
T 3dss_A 90 VKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADER 142 (331)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCC
Confidence 7899999999999999 56799999999999994 89999999998887664
No 193
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=56.25 E-value=26 Score=32.87 Aligned_cols=57 Identities=19% Similarity=0.099 Sum_probs=52.6
Q ss_pred cCcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 306 VRFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 306 lr~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
++.|++..|+..++--+.-+| |...|--+--||.-.|.|+.|.+-|+.+.+..|.-.
T Consensus 8 l~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~ 65 (273)
T 1zbp_A 8 LSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYL 65 (273)
T ss_dssp TTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGH
T ss_pred HhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhh
Confidence 588999999999999999999 788999999999999999999999999999888653
No 194
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=56.05 E-value=23 Score=33.80 Aligned_cols=50 Identities=12% Similarity=0.016 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhccCCC---hHHHHHHhHHHHHc-----CChHHHHHHHHHHHHHhcC
Q 017874 311 MRCALAACERLILLESD---AKELRDYSILLYHC-----GLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 311 ~~~AL~a~ErLllL~Pd---p~e~RDrGlLl~~l-----g~~~~A~~dL~~fl~~~~~ 360 (364)
...|....||.+.|+|+ ...+.=.|.+|++. |..+.|.+.|+.=++..||
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~ 236 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSA 236 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCC
Confidence 34455555555555553 22455555555553 5555555555555555554
No 195
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=52.66 E-value=15 Score=35.50 Aligned_cols=49 Identities=16% Similarity=0.116 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhccCCC-hHHHHHHhHHHHHcC-ChHHHHHHHHHHHHHhcC
Q 017874 312 RCALAACERLILLESD-AKELRDYSILLYHCG-LYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 312 ~~AL~a~ErLllL~Pd-p~e~RDrGlLl~~lg-~~~~A~~dL~~fl~~~~~ 360 (364)
++||.+++.+|.++|+ ..-|--||.++.++| .+++++..++..+...|.
T Consensus 71 e~AL~lt~~~L~~nP~~ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPK 121 (349)
T 3q7a_A 71 ERALELTEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLK 121 (349)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhCchhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCC
Confidence 4566666666666663 334555566666665 356666665555555554
No 196
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=51.95 E-value=15 Score=26.49 Aligned_cols=30 Identities=20% Similarity=-0.063 Sum_probs=27.4
Q ss_pred HHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 332 RDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 332 RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
-.+|..+++.|.|++|+..++..++..|+.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~ 33 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVG 33 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSST
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCc
Confidence 468999999999999999999999998875
No 197
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=50.81 E-value=20 Score=33.17 Aligned_cols=54 Identities=11% Similarity=-0.084 Sum_probs=45.5
Q ss_pred CcCCHHHHHHHHHHHhccCC---Ch----HHHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 307 RFGDMRCALAACERLILLES---DA----KELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P---dp----~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|+++.|+...+..+.+.+ |+ .-....|.++++.|.+..|+..++..++..+.
T Consensus 113 ~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~ 173 (378)
T 3q15_A 113 DQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQN 173 (378)
T ss_dssp HTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHT
T ss_pred HHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHh
Confidence 46799999999999988753 32 25778999999999999999999998887764
No 198
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=50.73 E-value=46 Score=28.21 Aligned_cols=49 Identities=10% Similarity=-0.091 Sum_probs=25.4
Q ss_pred cCCHHHHHHHHHHHhccCCChHHHHHHhHHHHHc-C-----ChHHHHHHHHHHHH
Q 017874 308 FGDMRCALAACERLILLESDAKELRDYSILLYHC-G-----LYEQSLQYLKFYQA 356 (364)
Q Consensus 308 ~~d~~~AL~a~ErLllL~Pdp~e~RDrGlLl~~l-g-----~~~~A~~dL~~fl~ 356 (364)
.+|+++|+...++.+.+.+++.-.-..|.+|.+- | ++..|+..++.-.+
T Consensus 142 ~~d~~~A~~~~~~A~~~~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~ 196 (212)
T 3rjv_A 142 PEDDVKASEYFKGSSSLSRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCL 196 (212)
T ss_dssp SCCHHHHHHHHHHHHHTSCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHH
Confidence 4455555555555555533444455555555543 2 45555555554443
No 199
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=47.37 E-value=22 Score=37.97 Aligned_cols=48 Identities=17% Similarity=0.094 Sum_probs=43.0
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHH
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFY 354 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~f 354 (364)
..|+++.||.++.+.+.+.| +-.-|--.+.+|.++|+|+.|+--|.-|
T Consensus 349 ~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 349 NRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred ccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 57899999999999999999 5668999999999999999999777654
No 200
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=45.92 E-value=35 Score=29.06 Aligned_cols=53 Identities=17% Similarity=0.153 Sum_probs=39.7
Q ss_pred cCCHHHHHHHHHHHhccCCC-hH-HHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 308 FGDMRCALAACERLILLESD-AK-ELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 308 ~~d~~~AL~a~ErLllL~Pd-p~-e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
..|.++++...|-++.-.|+ .- -+--.++-+|++|.|..|+.+.+.+++.-|+
T Consensus 55 ~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~ 109 (144)
T 1y8m_A 55 VNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERN 109 (144)
T ss_dssp HHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 34777888888888876663 22 3445678888899999999998888888775
No 201
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=45.55 E-value=24 Score=29.64 Aligned_cols=52 Identities=17% Similarity=0.150 Sum_probs=38.2
Q ss_pred CCHHHHHHHHHHHhccCC-ChH-HHHHHhHHHHHcCChHHHHHHHHHHHHHhcC
Q 017874 309 GDMRCALAACERLILLES-DAK-ELRDYSILLYHCGLYEQSLQYLKFYQAQWYN 360 (364)
Q Consensus 309 ~d~~~AL~a~ErLllL~P-dp~-e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~ 360 (364)
.|.++++...+-++.-.| +.- -+--.++-+|++|.|..|+...+.+++.-|+
T Consensus 57 ~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~ 110 (134)
T 3o48_A 57 NDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERN 110 (134)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCC
Confidence 377788888888777555 221 2344688888999999999988888887775
No 202
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=44.42 E-value=30 Score=31.98 Aligned_cols=53 Identities=9% Similarity=0.042 Sum_probs=43.1
Q ss_pred CcCCHHHHHHHHHHHhccCCChH------------------HHHHHhHHHHHcCChHHHHHHHHHHHHHhc
Q 017874 307 RFGDMRCALAACERLILLESDAK------------------ELRDYSILLYHCGLYEQSLQYLKFYQAQWY 359 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~Pdp~------------------e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~ 359 (364)
..|+++.|+.....++...|... .+-..|.+|...|.|++|.+.++..++..+
T Consensus 16 ~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~ 86 (434)
T 4b4t_Q 16 NEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMM 86 (434)
T ss_dssp HHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHH
T ss_pred HCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 35799999999999999988421 156789999999999999998877666544
No 203
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=42.76 E-value=50 Score=32.49 Aligned_cols=50 Identities=14% Similarity=0.068 Sum_probs=39.7
Q ss_pred CcCCHHHHHHHHHHHhc-----cCC-ChH---HHHHHhHHHHHcCChHHHHHHHHHHHH
Q 017874 307 RFGDMRCALAACERLIL-----LES-DAK---ELRDYSILLYHCGLYEQSLQYLKFYQA 356 (364)
Q Consensus 307 r~~d~~~AL~a~ErLll-----L~P-dp~---e~RDrGlLl~~lg~~~~A~~dL~~fl~ 356 (364)
..|+|+.|+..+++.|. |.| ||. -.-..|.+|...|+|++|...++.-++
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~ 368 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIK 368 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Confidence 46799999999998876 556 565 466789999999999999877665543
No 204
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=39.69 E-value=56 Score=31.94 Aligned_cols=50 Identities=20% Similarity=0.111 Sum_probs=40.0
Q ss_pred CcCCHHHHHHHHHHHhcc-----CC-ChH---HHHHHhHHHHHcCChHHHHHHHHHHHH
Q 017874 307 RFGDMRCALAACERLILL-----ES-DAK---ELRDYSILLYHCGLYEQSLQYLKFYQA 356 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL-----~P-dp~---e~RDrGlLl~~lg~~~~A~~dL~~fl~ 356 (364)
..|+++.|+..+++.|.. .| +|. -.-..|.+|...|+|++|....+.-++
T Consensus 299 ~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~ 357 (429)
T 3qwp_A 299 AHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTME 357 (429)
T ss_dssp HTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 578999999999999854 45 564 567789999999999999877665443
No 205
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=39.48 E-value=72 Score=30.17 Aligned_cols=52 Identities=13% Similarity=0.056 Sum_probs=45.4
Q ss_pred cCCHHHHHHHHHHHhccCC--Ch-HHHHHHhHHHHHcCChHHHHHHHHHHHHHhc
Q 017874 308 FGDMRCALAACERLILLES--DA-KELRDYSILLYHCGLYEQSLQYLKFYQAQWY 359 (364)
Q Consensus 308 ~~d~~~AL~a~ErLllL~P--dp-~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~ 359 (364)
.|+++.||..+++.+--.| +. ..+.-...++.+.|+.+.|...|+.+.+.-|
T Consensus 113 ~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~ 167 (310)
T 3mv2_B 113 LGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIE 167 (310)
T ss_dssp HTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred cCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCc
Confidence 5799999999999988887 43 4677889999999999999999999987766
No 206
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=36.63 E-value=79 Score=31.57 Aligned_cols=50 Identities=16% Similarity=0.124 Sum_probs=40.0
Q ss_pred CcCCHHHHHHHHHHHhc-----cCC-ChH---HHHHHhHHHHHcCChHHHHHHHHHHHH
Q 017874 307 RFGDMRCALAACERLIL-----LES-DAK---ELRDYSILLYHCGLYEQSLQYLKFYQA 356 (364)
Q Consensus 307 r~~d~~~AL~a~ErLll-----L~P-dp~---e~RDrGlLl~~lg~~~~A~~dL~~fl~ 356 (364)
..|+++.|+..+++.|. |.| ||. -.-..|.+|...|+|++|...++.-++
T Consensus 321 ~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~ 379 (490)
T 3n71_A 321 SEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVD 379 (490)
T ss_dssp TTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 78999999998888775 445 564 577899999999999999877665554
No 207
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=34.40 E-value=42 Score=31.91 Aligned_cols=54 Identities=20% Similarity=-0.093 Sum_probs=46.6
Q ss_pred cCcCCHHHHHHHHHHHhccCC-C-hHHHHHHhHHHHH-cCChHHHHHHHHHHHHHhc
Q 017874 306 VRFGDMRCALAACERLILLES-D-AKELRDYSILLYH-CGLYEQSLQYLKFYQAQWY 359 (364)
Q Consensus 306 lr~~d~~~AL~a~ErLllL~P-d-p~e~RDrGlLl~~-lg~~~~A~~dL~~fl~~~~ 359 (364)
+.+|+.++|....||.|.++| . ..-.=.+|--+++ .|++.+|...|+.-+..-|
T Consensus 215 ~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p 271 (301)
T 3u64_A 215 SFGGGMEKAHTAFEHLTRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDP 271 (301)
T ss_dssp TTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCG
T ss_pred ccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCC
Confidence 468999999999999999999 4 6788889988877 4999999999998876444
No 208
>2f4m_A Peptide N-glycanase; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: d.3.1.4 PDB: 2f4o_A*
Probab=33.06 E-value=2.3e+02 Score=26.66 Aligned_cols=30 Identities=13% Similarity=0.082 Sum_probs=27.9
Q ss_pred cHHHHHhhccCChHHHHHHHHHHHHHhCCc
Q 017874 172 YLHSVLTHRTGSAVMLSLIYSEILKMLRIW 201 (364)
Q Consensus 172 ~L~~VLe~R~GiPIsL~iIylevArRLglp 201 (364)
-...++++|+|..--.+.+++.++|.+|||
T Consensus 131 ~~~~~l~~r~G~C~d~A~lf~al~Ra~GIp 160 (295)
T 2f4m_A 131 NPEKLLETRCGRCGEWANCFTLCCRALGFE 160 (295)
T ss_dssp CHHHHHHHCEESHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHcCCEeeHHHHHHHHHHHHHCCCC
Confidence 345899999999999999999999999999
No 209
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=29.41 E-value=1.5e+02 Score=23.25 Aligned_cols=49 Identities=14% Similarity=-0.019 Sum_probs=42.1
Q ss_pred cCCHHHHHHHHHHHhccCCChHHHHHHhHHHHH----cCChHHHHHHHHHHHHH
Q 017874 308 FGDMRCALAACERLILLESDAKELRDYSILLYH----CGLYEQSLQYLKFYQAQ 357 (364)
Q Consensus 308 ~~d~~~AL~a~ErLllL~Pdp~e~RDrGlLl~~----lg~~~~A~~dL~~fl~~ 357 (364)
.+|+++|+...++.... .++.-.-..|.+|.+ .+++..|+..++.-.++
T Consensus 74 ~~d~~~A~~~~~~Aa~~-g~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~ 126 (138)
T 1klx_A 74 KKDLRKAAQYYSKACGL-NDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126 (138)
T ss_dssp CCCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred CccHHHHHHHHHHHHcC-CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHC
Confidence 67999999999998876 567778889999999 89999999998876654
No 210
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=28.21 E-value=1.6e+02 Score=24.66 Aligned_cols=50 Identities=8% Similarity=-0.062 Sum_probs=43.6
Q ss_pred cCCHHHHHHHHHHHhccCCC---hHHHHHHhHHHHH----cCChHHHHHHHHHHHHH
Q 017874 308 FGDMRCALAACERLILLESD---AKELRDYSILLYH----CGLYEQSLQYLKFYQAQ 357 (364)
Q Consensus 308 ~~d~~~AL~a~ErLllL~Pd---p~e~RDrGlLl~~----lg~~~~A~~dL~~fl~~ 357 (364)
.+|+++|+...++.+...|. +.-....|.+|.+ .+++..|+..++.-+++
T Consensus 102 ~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 102 ATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL 158 (212)
T ss_dssp SCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc
Confidence 56999999999999999994 7788899999999 88999999988887766
No 211
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=27.85 E-value=86 Score=23.47 Aligned_cols=29 Identities=21% Similarity=0.342 Sum_probs=23.5
Q ss_pred CcCCHHHHHHHHHHHhccCC-ChHHHHHHh
Q 017874 307 RFGDMRCALAACERLILLES-DAKELRDYS 335 (364)
Q Consensus 307 r~~d~~~AL~a~ErLllL~P-dp~e~RDrG 335 (364)
+.|+++.|+...++++.+.| ++.....++
T Consensus 58 ~~g~~~~A~~~~~~al~l~P~~~~~~~n~~ 87 (104)
T 2v5f_A 58 QQGDLDKALLLTKKLLELDPEHQRANGNLK 87 (104)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HccCHHHHHHHHHHHHhcCCCCHHHHhhHH
Confidence 45699999999999999999 565555555
No 212
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=26.79 E-value=59 Score=30.75 Aligned_cols=56 Identities=13% Similarity=-0.035 Sum_probs=47.7
Q ss_pred ccCcCCHHHHHHHHHHHhcc----------CC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCcC
Q 017874 305 SVRFGDMRCALAACERLILL----------ES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNIS 362 (364)
Q Consensus 305 ~lr~~d~~~AL~a~ErLllL----------~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~~ 362 (364)
.+..|+++.|-...+.++.+ +| ||.-+.....+.+++|. +|...++.-.+..|++.
T Consensus 221 ~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp 287 (310)
T 3mv2_B 221 HLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKLDHEHA 287 (310)
T ss_dssp HHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCH
T ss_pred HHHcCCHHHHHHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCCh
Confidence 44778999999999988887 48 57788899999999997 88888888888888874
No 213
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=25.40 E-value=71 Score=27.10 Aligned_cols=24 Identities=17% Similarity=0.242 Sum_probs=21.1
Q ss_pred ccCcCCHHHHHHHHHHHhccCCCh
Q 017874 305 SVRFGDMRCALAACERLILLESDA 328 (364)
Q Consensus 305 ~lr~~d~~~AL~a~ErLllL~Pdp 328 (364)
+.+-|+|.+|++++|++|..+|++
T Consensus 87 ~ykl~~Y~~Ar~y~d~lL~~eP~n 110 (144)
T 1y8m_A 87 CYKLGEYSMAKRYVDTLFEHERNN 110 (144)
T ss_dssp HHTTTCHHHHHHHHHHHHHTCCCC
T ss_pred HHHhhhHHHHHHHHHHHHhcCCCc
Confidence 347889999999999999999953
No 214
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=24.14 E-value=79 Score=26.48 Aligned_cols=23 Identities=17% Similarity=0.251 Sum_probs=20.5
Q ss_pred cCcCCHHHHHHHHHHHhccCCCh
Q 017874 306 VRFGDMRCALAACERLILLESDA 328 (364)
Q Consensus 306 lr~~d~~~AL~a~ErLllL~Pdp 328 (364)
.+-|++.+|+.++|++|..+|++
T Consensus 89 yklgdY~~Ar~y~d~lL~~eP~N 111 (134)
T 3o48_A 89 YKLGEYSMAKRYVDTLFEHERNN 111 (134)
T ss_dssp HHHTCHHHHHHHHHHHHTTCTTC
T ss_pred HHhhhHHHHHHHHHHHHhhCCCC
Confidence 36789999999999999999953
No 215
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=23.84 E-value=1.8e+02 Score=27.71 Aligned_cols=51 Identities=10% Similarity=-0.073 Sum_probs=41.0
Q ss_pred cCCHHHHHHHHHHHhccCCChHHHHHHhHHHHH----cCChHHHHHHHHHHHHHhc
Q 017874 308 FGDMRCALAACERLILLESDAKELRDYSILLYH----CGLYEQSLQYLKFYQAQWY 359 (364)
Q Consensus 308 ~~d~~~AL~a~ErLllL~Pdp~e~RDrGlLl~~----lg~~~~A~~dL~~fl~~~~ 359 (364)
.+|++.|+...++.+... ++.-+-..|.+|++ .+++.+|...++.-++.-|
T Consensus 380 ~~~~~~A~~~~~~A~~~~-~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~ 434 (490)
T 2xm6_A 380 KKDEQQAAIWMRKAAEQG-LSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDM 434 (490)
T ss_dssp CCCHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHhCC-CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC
Confidence 578888998888887653 56667778888888 8899999888888887763
No 216
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=23.71 E-value=1.4e+02 Score=29.39 Aligned_cols=50 Identities=10% Similarity=-0.151 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHhccCC-ChHHHHHHhHHHHHcCChHHHHHHHHHHHHHhcCc
Q 017874 311 MRCALAACERLILLES-DAKELRDYSILLYHCGLYEQSLQYLKFYQAQWYNI 361 (364)
Q Consensus 311 ~~~AL~a~ErLllL~P-dp~e~RDrGlLl~~lg~~~~A~~dL~~fl~~~~~~ 361 (364)
.++...+.|+.+...| .+..|-+++..+.+.|..+.|..-++.-+.. |++
T Consensus 195 ~~Rv~~~ye~al~~~p~~~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~ 245 (493)
T 2uy1_A 195 ESRMHFIHNYILDSFYYAEEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDG 245 (493)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCS
T ss_pred HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCc
Confidence 5677889999999999 5789999999999999999999999998888 765
No 217
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=22.35 E-value=68 Score=26.45 Aligned_cols=22 Identities=23% Similarity=0.253 Sum_probs=20.2
Q ss_pred cCcCCHHHHHHHHHHHhccCCC
Q 017874 306 VRFGDMRCALAACERLILLESD 327 (364)
Q Consensus 306 lr~~d~~~AL~a~ErLllL~Pd 327 (364)
.+-|+|.+|+.+++.+|..+|+
T Consensus 85 yklg~Y~~A~~~~~~lL~~eP~ 106 (126)
T 1nzn_A 85 YRLKEYEKALKYVRGLLQTEPQ 106 (126)
T ss_dssp HHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHhhhHHHHHHHHHHHHHhCCC
Confidence 3778999999999999999995
Done!