Your job contains 1 sequence.
>017879
MERHGRVSEGSQSDPSPEWTAPGTETGPEGLGVGAESYPERPDEADCIHYVRTGFCAYGS
RCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSV
SNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPT
PVPAPALYPPLQSPSVPSAQQYGVVVARPPLLHGSYVQGPYGPVLVSPSMFSLQGWSPYA
TSLNPISSPGTGTQSSVGSSSIYGITQLSASAPAYTGTYQSLPSSVGPSSSSQKEHPFPE
RPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPVSFFWHLLLHYY
ALHE
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017879
(364 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2081066 - symbol:AT3G06410 species:3702 "Arabi... 621 3.2e-102 2
TAIR|locus:2182988 - symbol:AT5G18550 species:3702 "Arabi... 631 6.7e-100 2
TAIR|locus:2043368 - symbol:AT2G47850 species:3702 "Arabi... 549 8.0e-91 2
TAIR|locus:2075477 - symbol:ZFN1 "zinc finger protein 1" ... 460 1.6e-67 2
TAIR|locus:2171407 - symbol:ZFN3 "zinc finger nuclease 3"... 445 4.2e-63 2
TAIR|locus:2010562 - symbol:AT1G04990 species:3702 "Arabi... 376 5.8e-51 3
TAIR|locus:2101170 - symbol:AT3G48440 species:3702 "Arabi... 309 4.7e-44 2
TAIR|locus:2087775 - symbol:HUA1 "ENHANCER OF AG-4 1" spe... 310 2.7e-41 2
TAIR|locus:1006230718 - symbol:AT1G48195 species:3702 "Ar... 215 1.2e-17 1
TAIR|locus:2013763 - symbol:AT1G29570 species:3702 "Arabi... 128 1.2e-05 1
UNIPROTKB|E2REH2 - symbol:MKRN2 "Uncharacterized protein"... 89 1.9e-05 3
ZFIN|ZDB-GENE-020213-2 - symbol:mkrn2 "makorin, ring fing... 80 4.1e-05 3
UNIPROTKB|F1NI93 - symbol:MKRN2 "Uncharacterized protein"... 77 4.7e-05 4
UNIPROTKB|Q9H000 - symbol:MKRN2 "Probable E3 ubiquitin-pr... 83 5.3e-05 4
UNIPROTKB|F1M3I4 - symbol:Mkrn2 "Protein Mkrn2" species:1... 79 6.1e-05 4
RGD|1310618 - symbol:Mkrn2 "makorin, ring finger protein,... 79 9.4e-05 4
MGI|MGI:1914277 - symbol:Mkrn2 "makorin, ring finger prot... 79 0.00014 4
>TAIR|locus:2081066 [details] [associations]
symbol:AT3G06410 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 EMBL:AC011623
eggNOG:NOG312935 HOGENOM:HOG000237733 EMBL:AK230312 EMBL:AK230438
IPI:IPI00535086 RefSeq:NP_187292.2 UniGene:At.27771
ProteinModelPortal:Q9SQU4 SMR:Q9SQU4 EnsemblPlants:AT3G06410.1
GeneID:819815 KEGG:ath:AT3G06410 TAIR:At3g06410 InParanoid:Q9SQU4
OMA:SSQQYGL PhylomeDB:Q9SQU4 ProtClustDB:CLSN2681554
Genevestigator:Q9SQU4 GermOnline:AT3G06410 Uniprot:Q9SQU4
Length = 462
Score = 621 (223.7 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 116/173 (67%), Positives = 133/173 (76%)
Query: 1 MERHGRVSE-GSQSDPSPEWTAPGTETGPE------GL------GVGAESYPERPDEADC 47
MER+GR E GS+SDPS EWT+ G ET E GL G G ESYPERPDE DC
Sbjct: 1 MERYGRPGEEGSRSDPSLEWTSHGGETAVEAPMWRLGLSGGGGGGGGGESYPERPDEPDC 60
Query: 48 IHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGAS 107
I+Y+RTG C YGSRCRFNHPRDRG+V+G R G PER+G PVCQ++MRTGTCK+GAS
Sbjct: 61 IYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHFMRTGTCKFGAS 120
Query: 108 CKYHHPRQGAG--SVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHH 158
CKYHHPRQG G SV+ VSL+Y GYPLRPGEKECSYY++T QCKFG TC+F+H
Sbjct: 121 CKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNH 173
Score = 412 (150.1 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 85/170 (50%), Positives = 103/170 (60%)
Query: 191 LQSPSVPSAQQYGVVVARPPLLHGSYVQGPYGPVLV-SPSMFSLQGWSPYATSLNPIXXX 249
LQS S+PS+QQYG+V+ RP L GSY+Q PYGP +V P M GW+PY SL+ +
Sbjct: 204 LQSQSIPSSQQYGLVLTRPSFLTGSYLQSPYGPPMVLPPGMVPYSGWNPYQASLSAMPSP 263
Query: 250 XXXXXXXXXXXXIYGITQLSASAPAYTGTYQXXXXXXXXXXXXQKEHPFPERPGQQECQY 309
IYG+T LS SA AYTGTYQ KE FP+RP Q ECQY
Sbjct: 264 GTQPSIGSSS--IYGLTPLSPSATAYTGTYQSVPSSNSTS----KE--FPQRPDQPECQY 315
Query: 310 YMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRP-VSFFWHLLLH 358
+M+TGDCKFGSSCR+HHP + + PK + LS GLPLRP V+ H H
Sbjct: 316 FMRTGDCKFGSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQH 365
Score = 234 (87.4 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 83 EFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYY 142
EFP+R QP CQY+MRTG CK+G+SC+YHHP + + L+ G PLRPG +C+++
Sbjct: 303 EFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHF 362
Query: 143 MKTRQCKFGATCKFHH 158
+ CKFG CKF H
Sbjct: 363 AQHGICKFGPACKFDH 378
Score = 190 (71.9 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
Identities = 34/82 (41%), Positives = 52/82 (63%)
Query: 35 AESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRG---SVMGAARAGGGEFPERVGQP 91
A + PER C H++RTG C +G+ C+++HPR G SV + + G +P R G+
Sbjct: 94 AGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLG-YPLRPGEK 152
Query: 92 VCQYYMRTGTCKYGASCKYHHP 113
C YY+RTG CK+G +C+++HP
Sbjct: 153 ECSYYLRTGQCKFGLTCRFNHP 174
Score = 181 (68.8 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 39/121 (32%), Positives = 62/121 (51%)
Query: 16 SPEWTA-PGTETGPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDR-GSV 73
SP TA GT ++ +P+RPD+ +C +++RTG C +GS CR++HP D
Sbjct: 281 SPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPK 340
Query: 74 MGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLR 133
G + G P R G C ++ + G CK+G +CK+ H + S S + + P+
Sbjct: 341 TGIVLSSIG-LPLRPGVAQCTHFAQHGICKFGPACKFDHSMSSSLSYSPSASSLTDMPVA 399
Query: 134 P 134
P
Sbjct: 400 P 400
Score = 145 (56.1 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 299 PERPGQQECQYYMKTGDCKFGSSCRFHHPRE-----LIVPKMDVTLSPFGLPLRP 348
PER G CQ++M+TG CKFG+SC++HHPR+ + P V+LS G PLRP
Sbjct: 98 PERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAP---VSLSYLGYPLRP 149
Score = 135 (52.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 21/35 (60%), Positives = 28/35 (80%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIV 332
+P RPG++EC YY++TG CKFG +CRF+HP L V
Sbjct: 145 YPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAV 179
Score = 123 (48.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 18/32 (56%), Positives = 26/32 (81%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRE 329
+PERP + +C YY++TG C +GS CRF+HPR+
Sbjct: 51 YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRD 82
Score = 85 (35.0 bits), Expect = 9.8e-68, Sum P(2) = 9.8e-68
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 299 PERPGQQECQYYMKTGDCKFGSSCRFHH 326
P RPG +C ++ + G CKFG +C+F H
Sbjct: 351 PLRPGVAQCTHFAQHGICKFGPACKFDH 378
>TAIR|locus:2182988 [details] [associations]
symbol:AT5G18550 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 eggNOG:NOG312935
HOGENOM:HOG000237733 ProtClustDB:CLSN2681554 EMBL:AC069328
EMBL:BT010886 EMBL:AK230175 IPI:IPI00533261 RefSeq:NP_197356.2
UniGene:At.22535 ProteinModelPortal:Q6NPN3 SMR:Q6NPN3 STRING:Q6NPN3
PaxDb:Q6NPN3 PRIDE:Q6NPN3 EnsemblPlants:AT5G18550.1 GeneID:831973
KEGG:ath:AT5G18550 TAIR:At5g18550 InParanoid:Q6NPN3 OMA:GSQPCAY
PhylomeDB:Q6NPN3 Genevestigator:Q6NPN3 GermOnline:AT5G18550
Uniprot:Q6NPN3
Length = 465
Score = 631 (227.2 bits), Expect = 6.7e-100, Sum P(2) = 6.7e-100
Identities = 115/170 (67%), Positives = 135/170 (79%)
Query: 1 MERHGRVSEG-SQSDPSPEWTAPGTETGPE------GL---GVGAESYPERPDEADCIHY 50
MER+G E S+SDPS EW+A GTETG E GL G G E++PERPDE DCI+Y
Sbjct: 1 MERYGGAGEDESRSDPSHEWSAQGTETGIEASMWRLGLRGGGGGGETFPERPDEPDCIYY 60
Query: 51 VRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKY 110
+RTG C YGSRCRFNHPR+R V+G R GEFPER+GQPVCQ++MRTGTCK+GASCKY
Sbjct: 61 LRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKY 120
Query: 111 HHPRQGAG--SVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHH 158
HHPRQG G SV+ VSLNY G+PLRPGEKECSY+M+T QCKFG+TC++HH
Sbjct: 121 HHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHH 170
Score = 380 (138.8 bits), Expect = 6.7e-100, Sum P(2) = 6.7e-100
Identities = 80/160 (50%), Positives = 96/160 (60%)
Query: 191 LQSPSVPSAQQYGVVVARPPLLHGSYVQGPYG--PVLVSPSMFSLQGWSPYATSLNPIXX 248
LQS +VPS+QQYGVV+ARP LL GSYVQ PYG +++ P M GW+PY S++ +
Sbjct: 197 LQSQTVPSSQQYGVVLARPQLLPGSYVQSPYGYGQMVLPPGMVPYSGWNPYQASVSAMPS 256
Query: 249 XXXXXXXXXXXXXIYGITQLSASAPAYTGTYQXXXXXXXXXXXXQKEHPFPERPGQQECQ 308
+YGIT LS SAPAY KE FP+RP Q ECQ
Sbjct: 257 PGTQPSMGTSS--VYGITPLSPSAPAYQS-------GPSSTGVSNKEQTFPQRPEQPECQ 307
Query: 309 YYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRP 348
Y+M+TGDCKFG+SCRFHHP E P+ TLS GLPLRP
Sbjct: 308 YFMRTGDCKFGTSCRFHHPMEAASPEAS-TLSHIGLPLRP 346
Score = 226 (84.6 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 37/75 (49%), Positives = 52/75 (69%)
Query: 84 FPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYM 143
FP+R QP CQY+MRTG CK+G SC++HHP + A ++ +L++ G PLRPG C+++
Sbjct: 297 FPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAASPEAS-TLSHIGLPLRPGAVPCTHFA 355
Query: 144 KTRQCKFGATCKFHH 158
+ CKFG CKF H
Sbjct: 356 QHGICKFGPACKFDH 370
Score = 214 (80.4 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
Identities = 39/87 (44%), Positives = 55/87 (63%)
Query: 30 GLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRG---SVMGAARAGGGEFPE 86
GL A +PER + C H++RTG C +G+ C+++HPR G SV + G FP
Sbjct: 86 GLRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMG-FPL 144
Query: 87 RVGQPVCQYYMRTGTCKYGASCKYHHP 113
R G+ C Y+MRTG CK+G++C+YHHP
Sbjct: 145 RPGEKECSYFMRTGQCKFGSTCRYHHP 171
Score = 199 (75.1 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 36/104 (34%), Positives = 63/104 (60%)
Query: 20 TAPGTETGPEGLGVG--AESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAA 77
+AP ++GP GV +++P+RP++ +C +++RTG C +G+ CRF+HP + S +
Sbjct: 277 SAPAYQSGPSSTGVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAASPEAST 336
Query: 78 RAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVS 121
+ G P R G C ++ + G CK+G +CK+ H G+ S+S
Sbjct: 337 LSHIG-LPLRPGAVPCTHFAQHGICKFGPACKFDHSL-GSSSLS 378
Score = 154 (59.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRE-----LIVPKMDVTLSPFGLPLRP 348
FPER GQ CQ++M+TG CKFG+SC++HHPR+ + P V+L+ G PLRP
Sbjct: 94 FPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTP---VSLNYMGFPLRP 146
Score = 144 (55.7 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHP 327
FP RPG++EC Y+M+TG CKFGS+CR+HHP
Sbjct: 142 FPLRPGEKECSYFMRTGQCKFGSTCRYHHP 171
Score = 124 (48.7 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHPR 328
FPERP + +C YY++TG C +GS CRF+HPR
Sbjct: 48 FPERPDEPDCIYYLRTGVCGYGSRCRFNHPR 78
Score = 119 (46.9 bits), Expect = 5.3e-31, Sum P(3) = 5.3e-31
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 115 QGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHH 158
Q S + VS +P RP + EC Y+M+T CKFG +C+FHH
Sbjct: 282 QSGPSSTGVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHH 325
Score = 86 (35.3 bits), Expect = 6.8e-69, Sum P(2) = 6.8e-69
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 299 PERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPVS 350
P RPG C ++ + G CKFG +C+F H L + + SP L PV+
Sbjct: 343 PLRPGAVPCTHFAQHGICKFGPACKFDH--SLGSSSLSYSPSPSSLTDMPVA 392
>TAIR|locus:2043368 [details] [associations]
symbol:AT2G47850 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AC005309 EMBL:BT030391
EMBL:BT004106 IPI:IPI00519400 PIR:C84920 RefSeq:NP_001078078.1
RefSeq:NP_182306.2 UniGene:At.21006 ProteinModelPortal:Q84W91
SMR:Q84W91 PaxDb:Q84W91 PRIDE:Q84W91 EnsemblPlants:AT2G47850.1
EnsemblPlants:AT2G47850.3 GeneID:819397 KEGG:ath:AT2G47850
TAIR:At2g47850 eggNOG:NOG312935 HOGENOM:HOG000237733
InParanoid:Q84W91 OMA:RYGVACK PhylomeDB:Q84W91
ProtClustDB:CLSN2680305 Genevestigator:Q84W91 GermOnline:AT2G47850
Uniprot:Q84W91
Length = 468
Score = 549 (198.3 bits), Expect = 8.0e-91, Sum P(2) = 8.0e-91
Identities = 92/153 (60%), Positives = 117/153 (76%)
Query: 10 GSQSDPSPEWTAPGTETGPEG----LGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFN 65
GSQS +P+WT +TG + LG+G++SYPERP DC +Y+RTG C YG+RCR+N
Sbjct: 10 GSQSAQAPDWTPADADTGLQESMWRLGLGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYN 69
Query: 66 HPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSL 125
HPRDR SV RA G ++PER G+P CQ+Y++TGTCK+GASCK+HHP+ GS+S+V L
Sbjct: 70 HPRDRASVEATVRATG-QYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPL 128
Query: 126 NYYGYPLRPGEKECSYYMKTRQCKFGATCKFHH 158
N YGYP+R G+ ECSYY+KT QCKFG TCKFHH
Sbjct: 129 NIYGYPVREGDNECSYYLKTGQCKFGITCKFHH 161
Score = 376 (137.4 bits), Expect = 8.0e-91, Sum P(2) = 8.0e-91
Identities = 75/162 (46%), Positives = 99/162 (61%)
Query: 194 PSVPSAQ--QYG-----VVVARPPLLHGSYVQGPYGPVLVSPSMFSLQGWSPYATSLNPI 246
PSV S QYG + VAR LL GSY+QG YGP+L++P + + GWSPY+ ++P
Sbjct: 181 PSVQSLMPDQYGGPSSSLRVART-LLPGSYMQGAYGPMLLTPGVVPIPGWSPYSAPVSP- 238
Query: 247 XXXXXXXXXXXXXXXIYGITQLSASAPAYTGTYQXXXXXXXXXXXXQKEHPFPERPGQQE 306
+YG+TQL+++ P+ G Y QKE FPERPG+ E
Sbjct: 239 -ALSPGAQHAVGATSLYGVTQLTSTTPSLPGVYPSLSSPTGVI---QKEQAFPERPGEPE 294
Query: 307 CQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRP 348
CQYY+KTGDCKFG+SC+FHHPR+ + P+ + LSP GLPLRP
Sbjct: 295 CQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRP 336
Score = 254 (94.5 bits), Expect = 8.0e-30, Sum P(2) = 8.0e-30
Identities = 41/75 (54%), Positives = 54/75 (72%)
Query: 84 FPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYM 143
FPER G+P CQYY++TG CK+G SCK+HHPR +N L+ G PLRPG + C++Y+
Sbjct: 286 FPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYV 345
Query: 144 KTRQCKFGATCKFHH 158
+ CKFG+TCKF H
Sbjct: 346 QNGFCKFGSTCKFDH 360
Score = 211 (79.3 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 36/82 (43%), Positives = 51/82 (62%)
Query: 38 YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYM 97
YPER E C Y++TG C +G+ C+F+HP++ G M +P R G C YY+
Sbjct: 87 YPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNECSYYL 146
Query: 98 RTGTCKYGASCKYHHPRQGAGS 119
+TG CK+G +CK+HHP Q AG+
Sbjct: 147 KTGQCKFGITCKFHHP-QPAGT 167
Score = 202 (76.2 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 37/107 (34%), Positives = 61/107 (57%)
Query: 7 VSEGSQSDPSPEWTAPGTETGPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNH 66
V++ + + PS P + P G+ +++PERP E +C +Y++TG C +G+ C+F+H
Sbjct: 256 VTQLTSTTPSLPGVYPSLSS-PTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHH 314
Query: 67 PRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHP 113
PRDR P R G C +Y++ G CK+G++CK+ HP
Sbjct: 315 PRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHP 361
Score = 150 (57.9 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLR 347
+PER G+ CQ+Y+KTG CKFG+SC+FHHP+ V L+ +G P+R
Sbjct: 87 YPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVR 136
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHPR 328
+P R G EC YY+KTG CKFG +C+FHHP+
Sbjct: 133 YPVREGDNECSYYLKTGQCKFGITCKFHHPQ 163
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 269 SASAPAYTGTYQXXXXXXXXXXXXQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPR 328
SA AP +T +PERPG +C YYM+TG C +G+ CR++HPR
Sbjct: 13 SAQAPDWTPADADTGLQESMWRLGLGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPR 72
Query: 329 E 329
+
Sbjct: 73 D 73
Score = 110 (43.8 bits), Expect = 8.8e-63, Sum P(2) = 8.8e-63
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 299 PERPGQQECQYYMKTGDCKFGSSCRFHHP 327
P RPG Q C +Y++ G CKFGS+C+F HP
Sbjct: 333 PLRPGVQRCTFYVQNGFCKFGSTCKFDHP 361
Score = 102 (41.0 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 38 YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEF 84
YP R + +C +Y++TG C +G C+F+HP+ G+ + A +F
Sbjct: 133 YPVREGDNECSYYLKTGQCKFGITCKFHHPQPAGTTVPPPPASAPQF 179
>TAIR|locus:2075477 [details] [associations]
symbol:ZFN1 "zinc finger protein 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0004518 "nuclease activity" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010313 "phytochrome
binding" evidence=IPI] [GO:0017148 "negative regulation of
translation" evidence=IMP] [GO:0048027 "mRNA 5'-UTR binding"
evidence=IPI] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005829 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0017148 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0048027 GO:GO:0004518 HOGENOM:HOG000237733
EMBL:AF138743 EMBL:AC018363 EMBL:AK117978 EMBL:BT025966
IPI:IPI00539955 PIR:T48874 RefSeq:NP_566183.1 UniGene:At.23706
ProteinModelPortal:Q8GXX7 SMR:Q8GXX7 STRING:Q8GXX7 PaxDb:Q8GXX7
PRIDE:Q8GXX7 EnsemblPlants:AT3G02830.1 GeneID:821230
KEGG:ath:AT3G02830 GeneFarm:4898 TAIR:At3g02830 eggNOG:NOG329662
InParanoid:Q8GXX7 OMA:SSDDQQR PhylomeDB:Q8GXX7
ProtClustDB:CLSN2917075 Genevestigator:Q8GXX7 GermOnline:AT3G02830
Uniprot:Q8GXX7
Length = 397
Score = 460 (167.0 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
Identities = 75/122 (61%), Positives = 93/122 (76%)
Query: 37 SYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYY 96
SYPERP E DC +Y+RTG C +GS CRFNHPRDR V+ AR G E+PER+GQP C+YY
Sbjct: 36 SYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRG-EYPERIGQPECEYY 94
Query: 97 MRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKF 156
++TGTCK+G +CK+HHPR AG VSLN GYPLR E +C+Y+++T CKFG TCKF
Sbjct: 95 LKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFLRTGHCKFGGTCKF 154
Query: 157 HH 158
+H
Sbjct: 155 NH 156
Score = 244 (91.0 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
Identities = 54/156 (34%), Positives = 75/156 (48%)
Query: 196 VPSAQQYGVVVARPPLLHGSYVQGP--YGPVLVSPSMFSLQGWSPYATSLNPIX-XXXXX 252
VP++ Q +R + Q P Y +++ + +QGW+PY+ L +
Sbjct: 166 VPTSGQQSYPWSRASFIASPRWQDPSSYASLIMPQGVVPVQGWNPYSGQLGSVSPSGTGN 225
Query: 253 XXXXXXXXXIYGITQLSASAPAYTGTYQXXXXXXXXXXXXQKEHPFPERPGQQECQYYMK 312
I S S +++G +E+ FPERPGQ ECQ+YMK
Sbjct: 226 DQNYRNLQQNETIESGSQSQGSFSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYMK 285
Query: 313 TGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRP 348
TGDCKFG+ C+FHHPR+ P D LS GLPLRP
Sbjct: 286 TGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRP 321
Score = 238 (88.8 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 82 GEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSY 141
G +PER G+P C YY+RTG C++G++C+++HPR ++ + YP R G+ EC Y
Sbjct: 35 GSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRGE-YPERIGQPECEY 93
Query: 142 YMKTRQCKFGATCKFHH 158
Y+KT CKFG TCKFHH
Sbjct: 94 YLKTGTCKFGVTCKFHH 110
Score = 236 (88.1 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 40/75 (53%), Positives = 49/75 (65%)
Query: 84 FPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYM 143
FPER GQP CQ+YM+TG CK+G CK+HHPR + L+ G PLRPGE C +Y
Sbjct: 271 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYT 330
Query: 144 KTRQCKFGATCKFHH 158
+ CKFG +CKF H
Sbjct: 331 RYGICKFGPSCKFDH 345
Score = 217 (81.4 bits), Expect = 2.3e-16, P = 2.3e-16
Identities = 42/115 (36%), Positives = 65/115 (56%)
Query: 1 MERHGRVSEGSQSDPSPEWTAPGTETGPEGL-GVGAES-YPERPDEADCIHYVRTGFCAY 58
++++ + GSQS S PG+ G + E+ +PERP + +C Y++TG C +
Sbjct: 232 LQQNETIESGSQSQGSFSGYNPGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKF 291
Query: 59 GSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHP 113
G+ C+F+HPRDR + P R G+P+C +Y R G CK+G SCK+ HP
Sbjct: 292 GTVCKFHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHP 346
Score = 201 (75.8 bits), Expect = 1.1e-39, Sum P(2) = 1.1e-39
Identities = 32/94 (34%), Positives = 55/94 (58%)
Query: 38 YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYM 97
YPER + +C +Y++TG C +G C+F+HPR++ + G +P R + C Y++
Sbjct: 82 YPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFL 141
Query: 98 RTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYP 131
RTG CK+G +CK++HP+ ++ + YP
Sbjct: 142 RTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSYP 175
Score = 158 (60.7 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 28/50 (56%), Positives = 35/50 (70%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLR 347
+PER GQ EC+YY+KTG CKFG +C+FHHPR V+L+ G PLR
Sbjct: 82 YPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLR 131
Score = 142 (55.0 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 22/37 (59%), Positives = 32/37 (86%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHPR--ELIV 332
+PERPG+ +C YY++TG C+FGS+CRF+HPR EL++
Sbjct: 37 YPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVI 73
Score = 122 (48.0 bits), Expect = 2.1e-31, Sum P(2) = 2.1e-31
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 121 SNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHH 158
S+ ++ YP RPGE +CSYY++T C+FG+TC+F+H
Sbjct: 28 SDETMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNH 65
Score = 107 (42.7 bits), Expect = 4.2e-29, Sum P(2) = 4.2e-29
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPVSF 351
+P R + +C Y+++TG CKFG +C+F+HP+ M T P SF
Sbjct: 128 YPLRSNEVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSYPWSRASF 181
Score = 99 (39.9 bits), Expect = 2.9e-52, Sum P(2) = 2.9e-52
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 299 PERPGQQECQYYMKTGDCKFGSSCRFHHP 327
P RPG+ C +Y + G CKFG SC+F HP
Sbjct: 318 PLRPGEPLCVFYTRYGICKFGPSCKFDHP 346
>TAIR|locus:2171407 [details] [associations]
symbol:ZFN3 "zinc finger nuclease 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0004518 "nuclease activity" evidence=TAS]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 EMBL:AB005242 GO:GO:0004518
HOGENOM:HOG000237733 EMBL:AF138872 EMBL:AY084634 EMBL:AY128342
EMBL:BT000014 EMBL:BX831982 IPI:IPI00516322 IPI:IPI00528450
IPI:IPI00528912 RefSeq:NP_568332.2 RefSeq:NP_851041.1
RefSeq:NP_974790.1 UniGene:At.21711 ProteinModelPortal:Q8L7N8
SMR:Q8L7N8 EnsemblPlants:AT5G16540.1 GeneID:831516
KEGG:ath:AT5G16540 GeneFarm:4900 TAIR:At5g16540 eggNOG:NOG281021
InParanoid:Q8L7N8 OMA:SAGNQGM PhylomeDB:Q8L7N8
ProtClustDB:CLSN2690167 Genevestigator:Q8L7N8 Uniprot:Q8L7N8
Length = 375
Score = 445 (161.7 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 74/128 (57%), Positives = 95/128 (74%)
Query: 31 LGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQ 90
+GV SYPER E DC +Y+RTG C +GS CRFNHP DR V+ AR G E+PER+GQ
Sbjct: 33 MGVDG-SYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKG-EYPERIGQ 90
Query: 91 PVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKF 150
P C++Y++TGTCK+G +CK+HHPR AG +VS+N YPLRP E +CSY+++ QCKF
Sbjct: 91 PECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCKF 150
Query: 151 GATCKFHH 158
G TCKF+H
Sbjct: 151 GGTCKFNH 158
Score = 234 (87.4 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 40/75 (53%), Positives = 49/75 (65%)
Query: 84 FPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYM 143
FPER GQP CQ+YM+TG CK+G CK+HHPR + L+ G PLRPGE C +Y
Sbjct: 240 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYS 299
Query: 144 KTRQCKFGATCKFHH 158
+ CKFG +CKF H
Sbjct: 300 RYGICKFGPSCKFDH 314
Score = 217 (81.4 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 37/55 (67%), Positives = 43/55 (78%)
Query: 294 KEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRP 348
+E+ FPERPGQ ECQ+YMKTGDCKFG+ C+FHHPR+ P D LS GLPLRP
Sbjct: 236 RENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRP 290
Score = 202 (76.2 bits), Expect = 2.7e-14, P = 2.7e-14
Identities = 33/76 (43%), Positives = 48/76 (63%)
Query: 38 YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYM 97
+PERP + +C Y++TG C +G+ C+F+HPRDR + P R G+P+C +Y
Sbjct: 240 FPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYS 299
Query: 98 RTGTCKYGASCKYHHP 113
R G CK+G SCK+ HP
Sbjct: 300 RYGICKFGPSCKFDHP 315
Score = 200 (75.5 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 32/95 (33%), Positives = 58/95 (61%)
Query: 38 YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYM 97
YPER + +C Y++TG C +G C+F+HPR++ + G+ +P R + C Y++
Sbjct: 84 YPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFL 143
Query: 98 RTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPL 132
R G CK+G +CK++HP+ + +N+ ++ G P+
Sbjct: 144 RIGQCKFGGTCKFNHPQTQS---TNLMVSVRGSPV 175
Score = 154 (59.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRP 348
+PER GQ EC++Y+KTG CKFG +C+FHHPR V+++ PLRP
Sbjct: 84 YPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRP 134
Score = 128 (50.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 20/37 (54%), Positives = 31/37 (83%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHP--RELIV 332
+PER G+ +C YY++TG C+FGS+CRF+HP R+L++
Sbjct: 39 YPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVI 75
Score = 124 (48.7 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 26/74 (35%), Positives = 40/74 (54%)
Query: 22 PGTETGPEG-LGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGS-VMGAARA 79
P + G +G + V SYP RP+E DC +++R G C +G C+FNHP+ + + +M + R
Sbjct: 113 PRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMVSVRG 172
Query: 80 GG--GEFPERVGQP 91
GQP
Sbjct: 173 SPVYSALQSLTGQP 186
Score = 101 (40.6 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 299 PERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSP 341
P RPG+ C +Y + G CKFG SC+F HP + + T SP
Sbjct: 287 PLRPGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNN-TASP 328
>TAIR|locus:2010562 [details] [associations]
symbol:AT1G04990 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=RCA] InterPro:IPR000571
Pfam:PF00642 PROSITE:PS50103 SMART:SM00356 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003723 GO:GO:0090305 EMBL:AC004809
GO:GO:0004518 HOGENOM:HOG000237733 EMBL:AY048253 EMBL:AY113065
IPI:IPI00522113 PIR:F86183 RefSeq:NP_563725.1 RefSeq:NP_973759.1
UniGene:At.21743 ProteinModelPortal:Q94AD9 SMR:Q94AD9 PaxDb:Q94AD9
PRIDE:Q94AD9 EnsemblPlants:AT1G04990.1 EnsemblPlants:AT1G04990.2
GeneID:839351 KEGG:ath:AT1G04990 TAIR:At1g04990 eggNOG:NOG290936
InParanoid:Q94AD9 OMA:THQRISP PhylomeDB:Q94AD9
ProtClustDB:CLSN2687681 Genevestigator:Q94AD9 GermOnline:AT1G04990
Uniprot:Q94AD9
Length = 404
Score = 376 (137.4 bits), Expect = 5.8e-51, Sum P(3) = 5.8e-51
Identities = 67/134 (50%), Positives = 84/134 (62%)
Query: 25 ETGPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEF 84
ETG E L YP+RP E DC Y+RTG C YGS CR+NHP + + E
Sbjct: 35 ETGVEELN----PYPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQDVAYYKE---EL 87
Query: 85 PERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMK 144
PER+GQP C+Y+++TG CKYG +CKYHHP+ G+ V N G P+R GEK C YY++
Sbjct: 88 PERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGA-QPVMFNVIGLPMRLGEKPCPYYLR 146
Query: 145 TRQCKFGATCKFHH 158
T C+FG CKFHH
Sbjct: 147 TGTCRFGVACKFHH 160
Score = 220 (82.5 bits), Expect = 5.8e-31, Sum P(3) = 5.8e-31
Identities = 36/91 (39%), Positives = 55/91 (60%)
Query: 28 PEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPER 87
P+ + E PER + DC ++++TG C YG C+++HP+DR G P R
Sbjct: 77 PQDVAYYKEELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQPVMFNVIG-LPMR 135
Query: 88 VGQPVCQYYMRTGTCKYGASCKYHHPRQGAG 118
+G+ C YY+RTGTC++G +CK+HHP+ G
Sbjct: 136 LGEKPCPYYLRTGTCRFGVACKFHHPQPDNG 166
Score = 178 (67.7 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 38/96 (39%), Positives = 45/96 (46%)
Query: 65 NHPRDRGSV--MGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSN 122
N P GS M A A E QP C+++M TGTCKYG CKY HP
Sbjct: 237 NQPYYSGSSASMAMAVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPP 296
Query: 123 VSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHH 158
+N + P RPG+ C + CKFG CKF H
Sbjct: 297 SLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDH 332
Score = 152 (58.6 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 27/74 (36%), Positives = 39/74 (52%)
Query: 40 ERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRT 99
E D+ +C ++ TG C YG C+++HP R S + P R GQP C +
Sbjct: 260 ESSDQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSY 319
Query: 100 GTCKYGASCKYHHP 113
G CK+G +CK+ HP
Sbjct: 320 GFCKFGPNCKFDHP 333
Score = 140 (54.3 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 296 HPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLR 347
+P+P+RPG+++CQ+Y++TG C +GSSCR++HP L P+ DV LP R
Sbjct: 42 NPYPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHL--PQ-DVAYYKEELPER 90
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 294 KEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLR 347
KE PER GQ +C+Y++KTG CK+G +C++HHP++ + V + GLP+R
Sbjct: 84 KEE-LPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQ-PVMFNVIGLPMR 135
Score = 116 (45.9 bits), Expect = 5.8e-51, Sum P(3) = 5.8e-51
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 300 ERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRP 348
E Q EC+++M TG CK+G C++ HP I ++PF LP RP
Sbjct: 260 ESSDQPECRFFMNTGTCKYGDDCKYSHPGVRISQPPPSLINPFVLPARP 308
Score = 114 (45.2 bits), Expect = 0.00069, P = 0.00069
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 299 PERPGQQECQYYMKTGDCKFGSSCRFHHPR 328
P R G++ C YY++TG C+FG +C+FHHP+
Sbjct: 133 PMRLGEKPCPYYLRTGTCRFGVACKFHHPQ 162
Score = 101 (40.6 bits), Expect = 2.1e-49, Sum P(3) = 2.1e-49
Identities = 23/56 (41%), Positives = 30/56 (53%)
Query: 296 HPF--PERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLS---PFGLPL 346
+PF P RPGQ C + G CKFG +C+F HP L P + + S PF P+
Sbjct: 300 NPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPM-LPYPGLTMATSLPTPFASPV 354
Score = 96 (38.9 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 15 PSPEWTAPGTETGPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPR-DRG 71
P+ ++ P G + + P R E C +Y+RTG C +G C+F+HP+ D G
Sbjct: 109 PTCKYHHPKDRNGAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQPDNG 166
Score = 66 (28.3 bits), Expect = 5.8e-51, Sum P(3) = 5.8e-51
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 221 YGPVLVSPSMFSL--QGWSPYATSLN 244
Y P+LVSPS L QGW+PY + N
Sbjct: 205 YVPILVSPSQGFLPPQGWAPYMAASN 230
>TAIR|locus:2101170 [details] [associations]
symbol:AT3G48440 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103
SMART:SM00356 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 EMBL:AL049659
HOGENOM:HOG000237733 EMBL:BT033139 IPI:IPI00517303 PIR:T06698
RefSeq:NP_190414.1 UniGene:At.50258 ProteinModelPortal:Q9STM4
SMR:Q9STM4 PaxDb:Q9STM4 PRIDE:Q9STM4 EnsemblPlants:AT3G48440.1
GeneID:824003 KEGG:ath:AT3G48440 TAIR:At3g48440 eggNOG:NOG288127
InParanoid:Q9STM4 OMA:PEWNGYQ PhylomeDB:Q9STM4
ProtClustDB:CLSN2719348 Genevestigator:Q9STM4 GermOnline:AT3G48440
Uniprot:Q9STM4
Length = 448
Score = 309 (113.8 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 56/123 (45%), Positives = 74/123 (60%)
Query: 38 YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPE--RVGQPVCQY 95
YP RP DC Y+RTG C +GS C+FNHP R + + + ++G C+Y
Sbjct: 107 YPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGKLGLIDCKY 166
Query: 96 YMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCK 155
Y RTG CKYG +C+++H +G S LN+ G PLRPGE EC YYM+ CK+GA CK
Sbjct: 167 YFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKYGAECK 226
Query: 156 FHH 158
F+H
Sbjct: 227 FNH 229
Score = 226 (84.6 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 38/76 (50%), Positives = 48/76 (63%)
Query: 83 EFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYY 142
EFPER QP C YYM+TG CK+ +CKYHHP+ + +LN G PLRP + C+YY
Sbjct: 342 EFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTYY 401
Query: 143 MKTRQCKFGATCKFHH 158
+ CKFG C+F H
Sbjct: 402 SRYGICKFGPACRFDH 417
Score = 191 (72.3 bits), Expect = 6.7e-27, Sum P(2) = 6.7e-27
Identities = 33/68 (48%), Positives = 40/68 (58%)
Query: 46 DCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYG 105
DC +Y RTG C YG CRFNH + + A P R G+ C YYMR G+CKYG
Sbjct: 163 DCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKYG 222
Query: 106 ASCKYHHP 113
A CK++HP
Sbjct: 223 AECKFNHP 230
Score = 186 (70.5 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 35 AESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQ 94
AE +PERPD+ +C +Y++TG C + C+++HP++R + P R Q +C
Sbjct: 340 AEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICT 399
Query: 95 YYMRTGTCKYGASCKYHHPRQ 115
YY R G CK+G +C++ H Q
Sbjct: 400 YYSRYGICKFGPACRFDHSVQ 420
Score = 172 (65.6 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 31/52 (59%), Positives = 38/52 (73%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMD-VTLSPFGLPLRP 348
FPERP Q EC YYMKTGDCKF +C++HHP+ + PK+ L+ GLPLRP
Sbjct: 343 FPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRL-PKLPPYALNDKGLPLRP 393
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 20/35 (57%), Positives = 29/35 (82%)
Query: 293 QKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHP 327
+ E+ +P RPG ++C +YM+TG CKFGSSC+F+HP
Sbjct: 102 ESENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHP 136
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 299 PERPGQQECQYYMKTGDCKFGSSCRFHHP 327
P RPG+ EC YYM+ G CK+G+ C+F+HP
Sbjct: 202 PLRPGEVECPYYMRNGSCKYGAECKFNHP 230
Score = 114 (45.2 bits), Expect = 0.00081, P = 0.00081
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 303 GQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSP----FGLPLRP 348
G +C+YY +TG CK+G +CRF+H +PK + +P GLPLRP
Sbjct: 160 GLIDCKYYFRTGGCKYGETCRFNHT----IPKSGLASAPELNFLGLPLRP 205
Score = 107 (42.7 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 39 PERPDEADCIHYVRTGFCAYGSRCRFNHP 67
P RP E +C +Y+R G C YG+ C+FNHP
Sbjct: 202 PLRPGEVECPYYMRNGSCKYGAECKFNHP 230
Score = 94 (38.1 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 16/28 (57%), Positives = 18/28 (64%)
Query: 299 PERPGQQECQYYMKTGDCKFGSSCRFHH 326
P RP Q C YY + G CKFG +CRF H
Sbjct: 390 PLRPDQNICTYYSRYGICKFGPACRFDH 417
>TAIR|locus:2087775 [details] [associations]
symbol:HUA1 "ENHANCER OF AG-4 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA;TAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001709 "cell fate
determination" evidence=TAS] [GO:0003723 "RNA binding"
evidence=ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000571 Pfam:PF00642
PROSITE:PS50103 SMART:SM00356 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0016607
GO:GO:0008270 GO:GO:0006397 GO:GO:0003723 GO:GO:0009908
EMBL:AB024033 GO:GO:0001709 EMBL:AY024357 EMBL:AC069474
EMBL:AK229145 IPI:IPI00536814 RefSeq:NP_187874.2 UniGene:At.5670
ProteinModelPortal:Q941Q3 SMR:Q941Q3 STRING:Q941Q3 PaxDb:Q941Q3
PRIDE:Q941Q3 EnsemblPlants:AT3G12680.1 GeneID:820448
KEGG:ath:AT3G12680 TAIR:At3g12680 eggNOG:NOG250655
HOGENOM:HOG000078745 InParanoid:Q941Q3 OMA:LGAHNTI PhylomeDB:Q941Q3
ProtClustDB:CLSN2690537 Genevestigator:Q941Q3 Uniprot:Q941Q3
Length = 524
Score = 310 (114.2 bits), Expect = 2.7e-41, Sum P(2) = 2.7e-41
Identities = 58/126 (46%), Positives = 79/126 (62%)
Query: 38 YPERPDEADCIHYVRTGFCAYGSRCRFNHPR--DRGSVMGAARAG---GGEFPERVGQPV 92
YP+R E DC HY++T C +G CRF+HP G + A E+PER G+P
Sbjct: 171 YPQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPD 230
Query: 93 CQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGA 152
C YY++T CKYG+ CK++HPR+ A +VS + + P RP E C++YMKT +CKFG
Sbjct: 231 CPYYIKTQRCKYGSKCKFNHPREEA-AVSVETQD--SLPERPSEPMCTFYMKTGKCKFGL 287
Query: 153 TCKFHH 158
+CKFHH
Sbjct: 288 SCKFHH 293
Score = 255 (94.8 bits), Expect = 4.7e-35, Sum P(2) = 4.7e-35
Identities = 45/98 (45%), Positives = 61/98 (62%)
Query: 17 PEWTAPGTETGPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGA 76
PE P + P V E YPERP E DC +Y++T C YGS+C+FNHPR+ +V
Sbjct: 204 PEGGIPDWKEAPV---VPNEEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVE 260
Query: 77 ARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPR 114
+ PER +P+C +YM+TG CK+G SCK+HHP+
Sbjct: 261 TQ---DSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPK 295
Score = 235 (87.8 bits), Expect = 5.7e-19, P = 5.7e-19
Identities = 45/100 (45%), Positives = 62/100 (62%)
Query: 24 TETGPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGA------- 76
T T P LGV + +YP+RP +++C +Y++TG C +G RC+F+HP DR S M
Sbjct: 404 TLTQPT-LGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPN 462
Query: 77 ARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQG 116
+ +P R G C YYM+TGTCKYGA+CK+ HP G
Sbjct: 463 VKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHPPPG 502
Score = 232 (86.7 bits), Expect = 6.7e-28, Sum P(2) = 6.7e-28
Identities = 41/82 (50%), Positives = 51/82 (62%)
Query: 84 FPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVS-------NVSLNYYGYPLRPGE 136
+P+R GQ C YYM+TG CK+G CK+HHP +++ NV L+ GYP R G
Sbjct: 417 YPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGA 476
Query: 137 KECSYYMKTRQCKFGATCKFHH 158
C YYMKT CK+GATCKF H
Sbjct: 477 LNCPYYMKTGTCKYGATCKFDH 498
Score = 197 (74.4 bits), Expect = 1.7e-21, Sum P(2) = 1.7e-21
Identities = 53/151 (35%), Positives = 71/151 (47%)
Query: 8 SEGSQSDPSPEWTAPGTETGPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHP 67
S G S+P P P L ++ P R E DC Y++TG C YG+ CR+NHP
Sbjct: 309 SVGLTSEPDAT-NNPHVTFTP-ALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHP 366
Query: 68 RDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNY 127
+R + + +A G + V + T A+ Y Q V + +
Sbjct: 367 -ERTAFI--PQAAGVNY-SLVSSNTANLNLGLVT---PATSFYQTLTQPTLGVISAT--- 416
Query: 128 YGYPLRPGEKECSYYMKTRQCKFGATCKFHH 158
YP RPG+ EC YYMKT +CKFG CKFHH
Sbjct: 417 --YPQRPGQSECDYYMKTGECKFGERCKFHH 445
Score = 154 (59.3 bits), Expect = 2.7e-41, Sum P(2) = 2.7e-41
Identities = 29/57 (50%), Positives = 37/57 (64%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELI------VPKM-DVTLSPFGLPLR 347
+P+RPGQ EC YYMKTG+CKFG C+FHHP + + P+ +V LS G P R
Sbjct: 417 YPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRR 473
Score = 146 (56.5 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 293 QKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTL-SPFGLPLRP 348
+ + PERP + C +YMKTG CKFG SC+FHHP+++ +P + S GL P
Sbjct: 260 ETQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEP 316
Score = 138 (53.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRP 348
+PERPG+ +C YY+KT CK+GS C+F+HPRE ++ S LP RP
Sbjct: 222 YPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDS---LPERP 269
Score = 116 (45.9 bits), Expect = 2.6e-37, Sum P(2) = 2.6e-37
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 299 PERPGQQECQYYMKTGDCKFGSSCRFHHP-RELIVPK 334
P R G+ +C +Y+KTG CK+G++CR++HP R +P+
Sbjct: 338 PVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQ 374
Score = 116 (45.9 bits), Expect = 0.00061, P = 0.00061
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHP 327
+P+R G+++C +YM+T CKFG SCRF HP
Sbjct: 171 YPQRAGEKDCTHYMQTRTCKFGESCRFDHP 200
Score = 115 (45.5 bits), Expect = 3.3e-37, Sum P(2) = 3.3e-37
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHP 327
+P R G C YYMKTG CK+G++C+F HP
Sbjct: 470 YPRREGALNCPYYMKTGTCKYGATCKFDHP 499
Score = 110 (43.8 bits), Expect = 6.7e-28, Sum P(2) = 6.7e-28
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 36 ESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRD 69
+S PERP E C Y++TG C +G C+F+HP+D
Sbjct: 263 DSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKD 296
>TAIR|locus:1006230718 [details] [associations]
symbol:AT1G48195 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:AC023673 EMBL:BX818039 IPI:IPI00522286
RefSeq:NP_973988.1 UniGene:At.38465 UniGene:At.63148
ProteinModelPortal:Q3ECU8 SMR:Q3ECU8 EnsemblPlants:AT1G48195.1
GeneID:2745816 KEGG:ath:AT1G48195 TAIR:At1g48195 eggNOG:NOG304278
HOGENOM:HOG000107451 InParanoid:Q3ECU8 OMA:AICPHYS PhylomeDB:Q3ECU8
ProtClustDB:CLSN2681286 Genevestigator:Q3ECU8 Uniprot:Q3ECU8
Length = 82
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 37/76 (48%), Positives = 47/76 (61%)
Query: 83 EFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYY 142
+FPER G+P C YY+RTG C +CKYHHP+ S +LN G PLRPG+ C +Y
Sbjct: 5 KFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPHY 64
Query: 143 MKTRQCKFGATCKFHH 158
+ C+ G TCKF H
Sbjct: 65 SRFGICRSGPTCKFDH 80
Score = 167 (63.8 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 36 ESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQY 95
E +PERP E +C +Y+RTG C C+++HP++ P R GQ +C +
Sbjct: 4 EKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPH 63
Query: 96 YMRTGTCKYGASCKYHH 112
Y R G C+ G +CK+ H
Sbjct: 64 YSRFGICRSGPTCKFDH 80
Score = 165 (63.1 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 295 EHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRP 348
E FPERPG+ EC YY++TG+C +C++HHP+ + + TL+ GLPLRP
Sbjct: 3 EEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRP 56
>TAIR|locus:2013763 [details] [associations]
symbol:AT1G29570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50103 SMART:SM00356
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:AC068667 IPI:IPI00519526 PIR:G86418
RefSeq:NP_174250.1 UniGene:At.51822 EnsemblPlants:AT1G29570.1
GeneID:839834 KEGG:ath:AT1G29570 TAIR:At1g29570 eggNOG:NOG325481
HOGENOM:HOG000107458 OMA:HIMDRNV PhylomeDB:Q9C7P4
ProtClustDB:CLSN2914472 Genevestigator:Q9C7P4 Uniprot:Q9C7P4
Length = 321
Score = 128 (50.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 18/37 (48%), Positives = 30/37 (81%)
Query: 293 QKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRE 329
++ P+P RPG+++CQ+Y+K G C++ SSCRF+HP +
Sbjct: 47 RQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQ 83
>UNIPROTKB|E2REH2 [details] [associations]
symbol:MKRN2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000571
Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 SMART:SM00356 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 GeneTree:ENSGT00390000014093 InterPro:IPR026293
PANTHER:PTHR11224:SF17 OMA:KGYCAYG EMBL:AAEX03012060
Ensembl:ENSCAFT00000007980 Uniprot:E2REH2
Length = 416
Score = 89 (36.4 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 50 YVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQP 91
Y + G+CAYG+RCR++H R + GA G P V P
Sbjct: 39 YYQKGYCAYGTRCRYDHTRPSAAAGGAV----GTMPHGVSSP 76
Score = 79 (32.9 bits), Expect = 8.3e-05, Sum P(4) = 8.3e-05
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 92 VCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPG 135
+C+YY + G C YG C+Y H R A + V +G PG
Sbjct: 36 ICKYYQK-GYCAYGTRCRYDHTRPSAAAGGAVGTMPHGVS-SPG 77
Score = 66 (28.3 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 298 FPERPGQQECQYYMK-TGDCKFGSSCRFHH 326
F + G++ C+Y+ + G C FGS C + H
Sbjct: 318 FKQGMGKKACKYFEQGKGTCPFGSKCLYRH 347
Score = 57 (25.1 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 135 GEKECSYYMKTR-QCKFGATCKFHH 158
G+K C Y+ + + C FG+ C + H
Sbjct: 323 GKKACKYFEQGKGTCPFGSKCLYRH 347
Score = 52 (23.4 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 90 QPVCQYYMRTGTCKYGASCKYHH 112
Q +C Y G C++G +C Y H
Sbjct: 168 QQLCPY-AAAGECRFGDACVYLH 189
Score = 45 (20.9 bits), Expect = 8.3e-05, Sum P(4) = 8.3e-05
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 44 EADCIHYVRTGFCAYGSRCRFNH 66
+ C +++ G C G++C F+H
Sbjct: 5 QVTCRYFMH-GVCREGNQCLFSH 26
Score = 44 (20.5 bits), Expect = 8.3e-05, Sum P(4) = 8.3e-05
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 136 EKECSYYMKTRQCKFGATCKFHH 158
E++ Y +C+FG C + H
Sbjct: 167 EQQLCPYAAAGECRFGDACVYLH 189
>ZFIN|ZDB-GENE-020213-2 [details] [associations]
symbol:mkrn2 "makorin, ring finger protein, 2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=ISS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 SMART:SM00356 UniPathway:UPA00143 Pfam:PF00097
Prosite:PS00518 ZFIN:ZDB-GENE-020213-2 GO:GO:0007399 GO:GO:0030154
GO:GO:0006355 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0006351 GO:GO:0003676 GO:GO:0016567 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5084
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 KO:K15687 GeneTree:ENSGT00390000014093
HOVERGEN:HBG066965 EMBL:AF277172 EMBL:BC065352 IPI:IPI00493411
RefSeq:NP_694511.1 UniGene:Dr.77762 STRING:Q9DFG8
Ensembl:ENSDART00000019997 Ensembl:ENSDART00000130504 GeneID:170783
KEGG:dre:170783 CTD:23609 OrthoDB:EOG4229K2 NextBio:20797101
ArrayExpress:Q9DFG8 Bgee:Q9DFG8 InterPro:IPR026293
PANTHER:PTHR11224:SF17 Uniprot:Q9DFG8
Length = 414
Score = 80 (33.2 bits), Expect = 0.00070, Sum P(4) = 0.00070
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 92 VCQYYMRTGTCKYGASCKYHH---PRQGAGSVSNVS 124
+C+YY R G C YG C+Y H P +G+G+ ++ S
Sbjct: 36 ICKYYQR-GACAYGDRCRYDHIKPPGRGSGAPADHS 70
Score = 78 (32.5 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 47 CIHYVRTGFCAYGSRCRFNH--PRDRGS 72
C +Y R G CAYG RCR++H P RGS
Sbjct: 37 CKYYQR-GACAYGDRCRYDHIKPPGRGS 63
Score = 77 (32.2 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 76 AARAGGGEFPE--RVGQPVCQYYMRTGTCKYGASCKYHH 112
AA A G FPE + +C + + G C+YG SC Y H
Sbjct: 151 AAAATAGTFPELQQTSPQICPF-LAAGQCQYGESCPYLH 188
Score = 52 (23.4 bits), Expect = 0.00070, Sum P(4) = 0.00070
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 44 EADCIHYVRTGFCAYGSRCRFNH 66
+ C +++ G C GSRC F+H
Sbjct: 5 QVTCRYFLH-GVCREGSRCLFSH 26
Score = 50 (22.7 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 298 FPERPGQQECQYYMK-TGDCKFGSSCRFHH 326
F ++ C+Y+ + G C FG C + H
Sbjct: 317 FKSGVSKKACKYFDQGRGTCPFGGKCFYMH 346
Score = 49 (22.3 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 136 EKECSYYMKTR-QCKFGATCKFHH 158
+K C Y+ + R C FG C + H
Sbjct: 323 KKACKYFDQGRGTCPFGGKCFYMH 346
Score = 42 (19.8 bits), Expect = 0.00070, Sum P(4) = 0.00070
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 142 YMKTRQCKFGATCKFHH 158
++ QC++G +C + H
Sbjct: 172 FLAAGQCQYGESCPYLH 188
>UNIPROTKB|F1NI93 [details] [associations]
symbol:MKRN2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR000571
Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50103
SMART:SM00184 SMART:SM00356 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR026290
PANTHER:PTHR11224 GeneTree:ENSGT00390000014093 InterPro:IPR026293
PANTHER:PTHR11224:SF17 OMA:KGYCAYG EMBL:AADN02013930
IPI:IPI00584461 Ensembl:ENSGALT00000007996 Uniprot:F1NI93
Length = 417
Score = 77 (32.2 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 92 VCQYYMRTGTCKYGASCKYHHPR 114
VC+YY + G C YGA C+Y H R
Sbjct: 36 VCKYYQK-GQCAYGARCRYDHIR 57
Score = 61 (26.5 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 298 FPERPGQQECQYYMK-TGDCKFGSSCRFHH 326
F + G++ C+Y+ + G C FG C + H
Sbjct: 317 FKQGVGKKPCKYFEQGKGTCPFGGKCLYFH 346
Score = 57 (25.1 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 44 EADCIHYVRTGFCAYGSRCRFNH 66
+ C +YV+ G C GS+C F+H
Sbjct: 5 QVTCRYYVQ-GVCREGSKCLFSH 26
Score = 42 (19.8 bits), Expect = 4.7e-05, Sum P(4) = 4.7e-05
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 135 GEKECSYYMKTRQCKFGATCKFHH 158
GE+ C Y C FG C + H
Sbjct: 166 GEQLCPY-AAAGACHFGDRCLYLH 188
>UNIPROTKB|Q9H000 [details] [associations]
symbol:MKRN2 "Probable E3 ubiquitin-protein ligase
makorin-2" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 UniPathway:UPA00143
Prosite:PS00518 EMBL:CH471055 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0003676 GO:GO:0016567 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5084
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 KO:K15687 HOVERGEN:HBG066965 CTD:23609
OrthoDB:EOG4229K2 InterPro:IPR026293 PANTHER:PTHR11224:SF17
EMBL:AF302084 EMBL:AF277170 EMBL:AF277164 EMBL:AF277165
EMBL:AF277166 EMBL:AF277167 EMBL:AF277168 EMBL:AF277169
EMBL:AF161555 EMBL:AK091318 EMBL:AC018500 EMBL:BC001799
EMBL:BC015715 EMBL:AL834512 IPI:IPI00396406 RefSeq:NP_054879.3
UniGene:Hs.591666 ProteinModelPortal:Q9H000 SMR:Q9H000
IntAct:Q9H000 STRING:Q9H000 PhosphoSite:Q9H000 DMDM:45645205
PRIDE:Q9H000 DNASU:23609 Ensembl:ENST00000170447 GeneID:23609
KEGG:hsa:23609 UCSC:uc003bxd.3 GeneCards:GC03P012598 HGNC:HGNC:7113
HPA:HPA037559 HPA:HPA037560 MIM:608426 neXtProt:NX_Q9H000
PharmGKB:PA30832 InParanoid:Q9H000 OMA:KGYCAYG ChiTaRS:MKRN2
GenomeRNAi:23609 NextBio:46312 ArrayExpress:Q9H000 Bgee:Q9H000
CleanEx:HS_MKRN2 Genevestigator:Q9H000 GermOnline:ENSG00000075975
Uniprot:Q9H000
Length = 416
Score = 83 (34.3 bits), Expect = 8.8e-05, Sum P(3) = 8.8e-05
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 50 YVRTGFCAYGSRCRFNHPRDRGSVMGA 76
Y + G+CAYG+RCR++H R + GA
Sbjct: 39 YYQKGYCAYGTRCRYDHTRPSAAAGGA 65
Score = 79 (32.9 bits), Expect = 5.3e-05, Sum P(4) = 5.3e-05
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 92 VCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYP 131
+C+YY + G C YG C+Y H R A + V + P
Sbjct: 36 ICKYYQK-GYCAYGTRCRYDHTRPSAAAGGAVGTMAHSVP 74
Score = 72 (30.4 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 84 FPERVGQPVCQYYMR-TGTCKYGASCKYHH 112
F + +G+ C+Y+ + GTC +G+ C Y H
Sbjct: 318 FKQGMGKKACKYFEQGKGTCPFGSKCLYRH 347
Score = 66 (28.3 bits), Expect = 5.3e-05, Sum P(4) = 5.3e-05
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 298 FPERPGQQECQYYMK-TGDCKFGSSCRFHH 326
F + G++ C+Y+ + G C FGS C + H
Sbjct: 318 FKQGMGKKACKYFEQGKGTCPFGSKCLYRH 347
Score = 57 (25.1 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 135 GEKECSYYMKTR-QCKFGATCKFHH 158
G+K C Y+ + + C FG+ C + H
Sbjct: 323 GKKACKYFEQGKGTCPFGSKCLYRH 347
Score = 52 (23.4 bits), Expect = 8.8e-05, Sum P(3) = 8.8e-05
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 90 QPVCQYYMRTGTCKYGASCKYHH 112
Q +C Y G C++G +C Y H
Sbjct: 168 QQLCPY-AAAGECRFGDACVYLH 189
Score = 47 (21.6 bits), Expect = 5.3e-05, Sum P(4) = 5.3e-05
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 50 YVRTGFCAYGSRCRFNH 66
Y G C GS+C F+H
Sbjct: 10 YFMHGVCREGSQCLFSH 26
Score = 44 (20.5 bits), Expect = 5.3e-05, Sum P(4) = 5.3e-05
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 136 EKECSYYMKTRQCKFGATCKFHH 158
E++ Y +C+FG C + H
Sbjct: 167 EQQLCPYAAAGECRFGDACVYLH 189
>UNIPROTKB|F1M3I4 [details] [associations]
symbol:Mkrn2 "Protein Mkrn2" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 RGD:1310618
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR026290 PANTHER:PTHR11224 InterPro:IPR026293
PANTHER:PTHR11224:SF17 IPI:IPI00566412 Ensembl:ENSRNOT00000044916
ArrayExpress:F1M3I4 Uniprot:F1M3I4
Length = 417
Score = 79 (32.9 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 50 YVRTGFCAYGSRCRFNHPRDRGSVMGA 76
Y + G+CAYG+RCR++H + + GA
Sbjct: 39 YYQKGYCAYGARCRYDHTKPPAAAGGA 65
Score = 76 (31.8 bits), Expect = 6.1e-05, Sum P(4) = 6.1e-05
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 92 VCQYYMRTGTCKYGASCKYHH--PRQGAG 118
+C+YY + G C YGA C+Y H P AG
Sbjct: 36 ICKYYQK-GYCAYGARCRYDHTKPPAAAG 63
Score = 66 (28.3 bits), Expect = 6.1e-05, Sum P(4) = 6.1e-05
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 298 FPERPGQQECQYYMK-TGDCKFGSSCRFHH 326
F + G++ C+Y+ + G C FGS C + H
Sbjct: 319 FKQGMGKKACKYFEQGKGTCPFGSKCLYRH 348
Score = 52 (23.4 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 90 QPVCQYYMRTGTCKYGASCKYHH 112
Q +C Y G C++G +C Y H
Sbjct: 169 QQLCPY-AAAGECRFGDACVYLH 190
Score = 50 (22.7 bits), Expect = 6.1e-05, Sum P(4) = 6.1e-05
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 48 IHYVRTGFCAYGSRCRFNH 66
+ Y G C GS+C F+H
Sbjct: 8 VRYFMHGVCREGSQCLFSH 26
Score = 44 (20.5 bits), Expect = 6.1e-05, Sum P(4) = 6.1e-05
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 136 EKECSYYMKTRQCKFGATCKFHH 158
E++ Y +C+FG C + H
Sbjct: 168 EQQLCPYAAAGECRFGDACVYLH 190
>RGD|1310618 [details] [associations]
symbol:Mkrn2 "makorin, ring finger protein, 2" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 RGD:1310618
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5084
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 KO:K15687 GeneTree:ENSGT00390000014093
HOVERGEN:HBG066965 CTD:23609 OrthoDB:EOG4229K2 InterPro:IPR026293
PANTHER:PTHR11224:SF17 OMA:KGYCAYG EMBL:BC083870 IPI:IPI00372043
RefSeq:NP_001008315.1 UniGene:Rn.129070 Ensembl:ENSRNOT00000013146
GeneID:297525 KEGG:rno:297525 UCSC:RGD:1310618 InParanoid:Q5XI23
NextBio:642384 Genevestigator:Q5XI23 Uniprot:Q5XI23
Length = 417
Score = 79 (32.9 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 50 YVRTGFCAYGSRCRFNHPRDRGSVMGA 76
Y + G+CAYG+RCR++H + + GA
Sbjct: 39 YYQKGYCAYGARCRYDHTKPPAAAGGA 65
Score = 76 (31.8 bits), Expect = 9.4e-05, Sum P(4) = 9.4e-05
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 92 VCQYYMRTGTCKYGASCKYHH--PRQGAG 118
+C+YY + G C YGA C+Y H P AG
Sbjct: 36 ICKYYQK-GYCAYGARCRYDHTKPPAAAG 63
Score = 66 (28.3 bits), Expect = 9.4e-05, Sum P(4) = 9.4e-05
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 298 FPERPGQQECQYYMK-TGDCKFGSSCRFHH 326
F + G++ C+Y+ + G C FGS C + H
Sbjct: 319 FKQGMGKKACKYFEQGKGTCPFGSKCLYRH 348
Score = 52 (23.4 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 90 QPVCQYYMRTGTCKYGASCKYHH 112
Q +C Y G C++G +C Y H
Sbjct: 169 QQLCPY-AAAGECRFGDACVYLH 190
Score = 48 (22.0 bits), Expect = 9.4e-05, Sum P(4) = 9.4e-05
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 44 EADCIHYVRTGFCAYGSRCRFNH 66
+ C +++ G C GS+C F+H
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSH 26
Score = 44 (20.5 bits), Expect = 9.4e-05, Sum P(4) = 9.4e-05
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 136 EKECSYYMKTRQCKFGATCKFHH 158
E++ Y +C+FG C + H
Sbjct: 168 EQQLCPYAAAGECRFGDACVYLH 190
>MGI|MGI:1914277 [details] [associations]
symbol:Mkrn2 "makorin, ring finger protein, 2" species:10090
"Mus musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=ISO;ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000571 Pfam:PF00642 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 UniPathway:UPA00143
MGI:MGI:1914277 Prosite:PS00518 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0003676 GO:GO:0016567 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:CH466523 eggNOG:COG5084
InterPro:IPR017907 InterPro:IPR026290 PANTHER:PTHR11224
HOGENOM:HOG000252976 KO:K15687 GeneTree:ENSGT00390000014093
HOVERGEN:HBG066965 CTD:23609 OrthoDB:EOG4229K2 InterPro:IPR026293
PANTHER:PTHR11224:SF17 OMA:KGYCAYG EMBL:AF277171 EMBL:AK011295
EMBL:AK077926 EMBL:BC025547 IPI:IPI00620251 RefSeq:NP_075779.2
UniGene:Mm.101316 ProteinModelPortal:Q9ERV1 SMR:Q9ERV1
PhosphoSite:Q9ERV1 PRIDE:Q9ERV1 Ensembl:ENSMUST00000000449
GeneID:67027 KEGG:mmu:67027 InParanoid:Q6GTY9 NextBio:323348
Bgee:Q9ERV1 CleanEx:MM_MKRN2 Genevestigator:Q9ERV1
GermOnline:ENSMUSG00000000439 Uniprot:Q9ERV1
Length = 416
Score = 79 (32.9 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 50 YVRTGFCAYGSRCRFNHPRDRGSVMGA 76
Y + G+CAYG+RCR++H + + GA
Sbjct: 39 YYQKGYCAYGARCRYDHTKPPAAAGGA 65
Score = 76 (31.8 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 92 VCQYYMRTGTCKYGASCKYHH--PRQGAG 118
+C+YY + G C YGA C+Y H P AG
Sbjct: 36 ICKYYQK-GYCAYGARCRYDHTKPPAAAG 63
Score = 66 (28.3 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 298 FPERPGQQECQYYMK-TGDCKFGSSCRFHH 326
F + G++ C+Y+ + G C FGS C + H
Sbjct: 318 FKQGMGKKACKYFEQGKGTCPFGSKCLYRH 347
Score = 48 (22.0 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 44 EADCIHYVRTGFCAYGSRCRFNH 66
+ C +++ G C GS+C F+H
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSH 26
Score = 48 (22.0 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 96 YMRTGTCKYGASCKYHH 112
Y G C++G +C Y H
Sbjct: 173 YAAAGECRFGDACVYLH 189
Score = 42 (19.8 bits), Expect = 0.00014, Sum P(4) = 0.00014
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 136 EKECSYYMKTRQCKFGATCKFHH 158
E + Y +C+FG C + H
Sbjct: 167 EPQLCPYAAAGECRFGDACVYLH 189
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.453 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 364 305 0.00098 115 3 11 22 0.40 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 608 (65 KB)
Total size of DFA: 246 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.52u 0.16s 22.68t Elapsed: 00:00:01
Total cpu time: 22.52u 0.16s 22.68t Elapsed: 00:00:01
Start: Fri May 10 03:18:32 2013 End: Fri May 10 03:18:33 2013