Query 017885
Match_columns 364
No_of_seqs 142 out of 253
Neff 5.7
Searched_HMMs 46136
Date Fri Mar 29 04:16:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017885.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017885hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3912 Predicted integral mem 100.0 1.3E-30 2.8E-35 248.2 17.9 218 119-342 6-243 (372)
2 PF06027 DUF914: Eukaryotic pr 99.9 6E-27 1.3E-31 231.2 16.3 189 129-327 27-217 (334)
3 KOG2766 Predicted membrane pro 99.9 7.1E-23 1.5E-27 193.3 0.9 181 129-324 31-212 (336)
4 PF08449 UAA: UAA transporter 99.7 6.2E-16 1.3E-20 150.0 16.1 189 128-327 12-205 (303)
5 PF04142 Nuc_sug_transp: Nucle 99.7 9.3E-17 2E-21 152.6 10.1 138 184-327 18-165 (244)
6 PF08627 CRT-like: CRT-like; 99.6 4.8E-16 1E-20 132.5 6.3 79 110-188 51-130 (130)
7 PTZ00343 triose or hexose phos 99.4 2.6E-12 5.5E-17 127.8 17.0 203 110-324 43-247 (350)
8 TIGR00817 tpt Tpt phosphate/ph 99.4 3.6E-12 7.9E-17 123.0 15.4 186 117-323 3-192 (302)
9 KOG2234 Predicted UDP-galactos 99.2 3.3E-10 7.2E-15 112.0 14.6 136 184-325 93-232 (345)
10 PLN00411 nodulin MtN21 family 99.1 1.1E-09 2.3E-14 109.8 15.4 196 113-319 10-231 (358)
11 PRK11272 putative DMT superfam 99.1 3.2E-09 6.9E-14 102.5 15.9 166 112-291 4-171 (292)
12 TIGR00950 2A78 Carboxylate/Ami 99.0 3E-09 6.6E-14 99.4 13.6 172 128-321 1-173 (260)
13 PRK11453 O-acetylserine/cystei 99.0 2.1E-08 4.6E-13 97.0 15.9 176 120-318 8-186 (299)
14 PRK11689 aromatic amino acid e 98.9 3.5E-08 7.7E-13 95.4 16.2 162 120-292 8-178 (295)
15 PRK15430 putative chlorampheni 98.8 7.2E-08 1.6E-12 93.4 12.3 158 118-291 10-170 (296)
16 KOG1441 Glucose-6-phosphate/ph 98.8 1.7E-07 3.7E-12 92.6 14.4 200 113-329 14-216 (316)
17 TIGR00688 rarD rarD protein. T 98.7 7.2E-08 1.6E-12 90.9 10.5 158 119-291 5-167 (256)
18 KOG1581 UDP-galactose transpor 98.7 3.7E-07 8E-12 89.1 14.4 170 143-323 48-219 (327)
19 KOG2765 Predicted membrane pro 98.7 1.7E-07 3.6E-12 93.6 11.2 151 187-342 163-314 (416)
20 COG0697 RhaT Permeases of the 98.6 1.6E-06 3.5E-11 80.9 16.3 168 116-293 7-177 (292)
21 PF13536 EmrE: Multidrug resis 98.6 3.8E-08 8.2E-13 82.4 3.5 100 159-259 10-110 (113)
22 TIGR03340 phn_DUF6 phosphonate 98.5 7.1E-07 1.5E-11 85.6 11.3 103 184-292 63-166 (281)
23 PF00892 EamA: EamA-like trans 98.4 4.5E-07 9.8E-12 74.3 5.3 122 127-253 2-124 (126)
24 KOG4510 Permease of the drug/m 98.3 6.3E-07 1.4E-11 86.4 4.4 168 113-291 36-212 (346)
25 PRK10532 threonine and homoser 98.3 4.5E-05 9.8E-10 73.8 17.3 157 117-292 14-170 (293)
26 COG2510 Predicted membrane pro 98.3 5.8E-06 1.2E-10 71.8 9.5 133 119-255 6-139 (140)
27 KOG1583 UDP-N-acetylglucosamin 98.0 3.7E-06 8.1E-11 81.4 3.6 96 202-297 83-191 (330)
28 TIGR00776 RhaT RhaT L-rhamnose 97.9 0.0005 1.1E-08 66.8 15.5 102 190-291 66-173 (290)
29 TIGR00950 2A78 Carboxylate/Ami 97.7 0.00044 9.6E-09 64.6 11.0 130 117-250 129-259 (260)
30 KOG1580 UDP-galactose transpor 97.4 0.00023 5E-09 67.9 5.2 133 182-316 84-216 (337)
31 KOG1443 Predicted integral mem 97.4 0.0023 5E-08 63.1 11.9 175 132-316 32-211 (349)
32 KOG1582 UDP-galactose transpor 97.3 0.0003 6.5E-09 68.4 5.4 185 101-296 30-216 (367)
33 PF05653 Mg_trans_NIPA: Magnes 97.1 0.00048 1E-08 67.8 4.5 74 185-258 51-125 (300)
34 KOG1444 Nucleotide-sugar trans 97.1 0.0039 8.5E-08 61.6 10.6 167 116-294 12-181 (314)
35 KOG1442 GDP-fucose transporter 97.1 0.00078 1.7E-08 65.6 5.6 115 204-329 123-238 (347)
36 PF03151 TPT: Triose-phosphate 97.0 0.0044 9.6E-08 53.3 8.9 67 186-252 84-150 (153)
37 TIGR03340 phn_DUF6 phosphonate 96.9 0.0011 2.4E-08 63.5 4.8 67 186-252 213-280 (281)
38 TIGR00803 nst UDP-galactose tr 96.8 0.0057 1.2E-07 56.7 8.7 108 187-295 3-110 (222)
39 PLN00411 nodulin MtN21 family 96.8 0.004 8.8E-08 62.7 7.6 68 189-256 262-329 (358)
40 PRK15051 4-amino-4-deoxy-L-ara 96.7 0.0018 4E-08 54.6 3.8 64 191-254 45-108 (111)
41 PRK10532 threonine and homoser 96.7 0.011 2.4E-07 57.2 9.6 70 187-256 212-282 (293)
42 PRK11689 aromatic amino acid e 96.5 0.009 1.9E-07 57.9 8.2 71 186-256 218-288 (295)
43 PF08449 UAA: UAA transporter 96.5 0.01 2.2E-07 57.8 7.9 136 116-253 155-295 (303)
44 PRK11272 putative DMT superfam 96.1 0.019 4.1E-07 55.5 7.7 69 186-254 215-284 (292)
45 TIGR00776 RhaT RhaT L-rhamnose 95.9 0.028 6.2E-07 54.6 7.9 72 184-255 212-288 (290)
46 COG0697 RhaT Permeases of the 95.9 0.041 8.9E-07 51.2 8.6 70 185-254 216-286 (292)
47 KOG2922 Uncharacterized conser 95.6 0.02 4.4E-07 56.9 5.5 72 186-257 66-138 (335)
48 PRK15430 putative chlorampheni 95.5 0.071 1.5E-06 51.7 9.1 70 187-256 217-286 (296)
49 PTZ00343 triose or hexose phos 95.3 0.08 1.7E-06 52.9 8.7 62 191-252 280-345 (350)
50 KOG4314 Predicted carbohydrate 95.1 0.16 3.5E-06 47.8 9.3 97 191-292 61-157 (290)
51 PRK11453 O-acetylserine/cystei 95.0 0.13 2.7E-06 49.9 8.9 71 186-256 217-288 (299)
52 PF10639 UPF0546: Uncharacteri 95.0 0.025 5.4E-07 48.3 3.5 71 184-254 42-113 (113)
53 PRK02971 4-amino-4-deoxy-L-ara 94.9 0.13 2.8E-06 44.7 7.7 115 120-256 6-123 (129)
54 TIGR00803 nst UDP-galactose tr 94.8 0.16 3.5E-06 46.9 8.7 67 186-252 155-221 (222)
55 TIGR00817 tpt Tpt phosphate/ph 94.7 0.076 1.7E-06 51.3 6.4 57 199-255 237-293 (302)
56 PRK10452 multidrug efflux syst 93.9 0.043 9.2E-07 47.3 2.6 73 185-257 32-105 (120)
57 PRK09541 emrE multidrug efflux 90.8 0.16 3.5E-06 43.0 2.2 61 196-256 43-104 (110)
58 PRK10650 multidrug efflux syst 90.7 0.16 3.6E-06 43.0 2.1 68 186-253 38-106 (109)
59 PF06800 Sugar_transport: Suga 89.9 0.95 2.1E-05 44.3 6.9 69 184-252 196-268 (269)
60 PRK11431 multidrug efflux syst 88.2 0.38 8.2E-06 40.5 2.5 67 188-254 34-101 (105)
61 COG2076 EmrE Membrane transpor 88.0 0.51 1.1E-05 40.0 3.1 71 184-254 31-102 (106)
62 PF06800 Sugar_transport: Suga 87.7 11 0.00023 37.0 12.5 147 141-291 7-159 (269)
63 KOG4314 Predicted carbohydrate 87.1 2.2 4.9E-05 40.3 7.1 156 101-257 120-278 (290)
64 PF00893 Multi_Drug_Res: Small 86.5 1.4 3E-05 35.9 4.9 56 191-246 37-93 (93)
65 PF06027 DUF914: Eukaryotic pr 85.3 4.9 0.00011 40.4 9.0 64 194-257 244-307 (334)
66 PF12398 DUF3660: Receptor ser 84.8 0.64 1.4E-05 33.0 1.8 30 33-62 3-32 (42)
67 PF03151 TPT: Triose-phosphate 84.2 3.2 6.9E-05 35.4 6.3 57 271-328 1-57 (153)
68 KOG1580 UDP-galactose transpor 83.5 0.52 1.1E-05 45.6 1.1 74 184-257 242-315 (337)
69 PF04142 Nuc_sug_transp: Nucle 83.1 13 0.00028 35.6 10.5 60 187-246 185-244 (244)
70 COG2962 RarD Predicted permeas 80.7 3.1 6.8E-05 41.1 5.4 70 186-255 74-144 (293)
71 PRK13499 rhamnose-proton sympo 80.4 8.8 0.00019 38.9 8.7 100 187-286 77-190 (345)
72 PF04657 DUF606: Protein of un 78.4 7 0.00015 34.2 6.4 121 123-252 12-138 (138)
73 PF02694 UPF0060: Uncharacteri 75.9 4.4 9.6E-05 34.4 4.2 49 208-256 56-104 (107)
74 KOG1581 UDP-galactose transpor 74.1 19 0.00042 36.0 8.8 67 186-252 244-310 (327)
75 KOG2765 Predicted membrane pro 73.4 29 0.00063 35.8 10.0 82 177-258 307-393 (416)
76 COG1742 Uncharacterized conser 72.5 36 0.00078 28.9 8.8 48 209-256 58-105 (109)
77 PF06570 DUF1129: Protein of u 69.3 22 0.00049 32.9 7.8 55 183-237 146-203 (206)
78 PF15169 DUF4564: Domain of un 69.1 5.2 0.00011 37.1 3.4 55 231-294 15-72 (187)
79 COG5006 rhtA Threonine/homoser 65.9 4.9 0.00011 39.3 2.7 57 195-251 222-278 (292)
80 KOG4831 Unnamed protein [Funct 61.0 6 0.00013 33.8 2.0 71 184-254 53-124 (125)
81 KOG1442 GDP-fucose transporter 58.9 16 0.00034 36.4 4.7 118 128-249 197-321 (347)
82 PF02554 CstA: Carbon starvati 57.6 82 0.0018 32.4 9.8 28 227-254 233-263 (376)
83 COG4858 Uncharacterized membra 55.8 58 0.0013 30.6 7.6 62 178-239 156-220 (226)
84 KOG4510 Permease of the drug/m 54.9 12 0.00027 37.0 3.3 65 184-248 254-318 (346)
85 PRK13499 rhamnose-proton sympo 54.6 89 0.0019 31.7 9.5 67 187-254 264-340 (345)
86 PRK02237 hypothetical protein; 53.2 7.4 0.00016 33.2 1.3 47 209-255 59-105 (109)
87 COG2962 RarD Predicted permeas 51.2 57 0.0012 32.4 7.2 66 187-252 215-280 (293)
88 KOG1441 Glucose-6-phosphate/ph 50.1 8 0.00017 38.7 1.2 62 191-252 243-304 (316)
89 KOG2234 Predicted UDP-galactos 45.3 96 0.0021 31.6 8.0 68 187-254 254-321 (345)
90 PF04973 NMN_transporter: Nico 42.1 1.5E+02 0.0032 26.7 8.2 30 204-233 104-133 (181)
91 PF02487 CLN3: CLN3 protein; 41.9 80 0.0017 32.7 7.0 64 226-302 79-142 (402)
92 COG5070 VRG4 Nucleotide-sugar 38.6 84 0.0018 30.6 6.0 71 186-256 71-141 (309)
93 KOG1582 UDP-galactose transpor 31.9 56 0.0012 32.6 3.8 72 188-259 261-336 (367)
94 COG1966 CstA Carbon starvation 30.7 3.6E+02 0.0078 29.4 9.8 57 92-150 107-163 (575)
95 PF06123 CreD: Inner membrane 28.3 2.6E+02 0.0055 29.4 8.2 31 209-239 400-430 (430)
96 PF15100 TMEM187: TMEM187 prot 26.9 2.2E+02 0.0047 27.5 6.7 111 120-232 11-131 (242)
97 PF09656 PGPGW: Putative trans 25.8 58 0.0012 24.3 2.1 46 238-295 4-49 (53)
98 PRK11715 inner membrane protei 25.4 3E+02 0.0066 28.9 8.1 30 209-238 406-435 (436)
99 KOG1583 UDP-N-acetylglucosamin 25.2 14 0.00031 36.6 -1.5 34 222-255 281-314 (330)
100 TIGR00688 rarD rarD protein. T 24.7 5.4E+02 0.012 23.8 9.1 45 186-230 211-255 (256)
101 PF05072 Herpes_UL43: Herpesvi 24.2 6.4E+02 0.014 26.0 10.0 42 190-236 307-348 (373)
102 PF04342 DUF486: Protein of un 23.5 38 0.00082 28.9 0.9 33 220-252 73-105 (108)
103 COG2456 Uncharacterized conser 22.1 52 0.0011 28.2 1.5 46 269-321 45-90 (121)
104 PF05915 DUF872: Eukaryotic pr 20.5 4.1E+02 0.0089 22.7 6.6 27 112-138 38-64 (115)
No 1
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.97 E-value=1.3e-30 Score=248.16 Aligned_cols=218 Identities=19% Similarity=0.229 Sum_probs=177.6
Q ss_pred HHHHHHHHhhhhHHHHHHHHhC------CCCChHHHHHHHHHhHHHHHHHHHHHHHHh---cCCcc-------hhhhcCC
Q 017885 119 IAAAVTVLLGVGNRVLYKLALV------PLKHYPFFLAQLATFGYVAVYFSILYLRYH---AGIVT-------DEMLSMP 182 (364)
Q Consensus 119 il~v~lvi~G~~N~V~~Kl~~~------~~~~yp~fl~q~~t~~yi~v~f~il~~r~~---~~~i~-------~e~~~~p 182 (364)
++.+.|+++|+.|++..||+++ +.++||+.++..|++|-...+....++|.+ .+... ++.-.++
T Consensus 6 ~ls~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~ 85 (372)
T KOG3912|consen 6 FLSLIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN 85 (372)
T ss_pred hhhhhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC
Confidence 4678899999999999999976 458999999988776642212111223322 22211 1222355
Q ss_pred CcceehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCC--
Q 017885 183 KAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNP-- 260 (364)
Q Consensus 183 ~~~f~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~-- 260 (364)
+..|+.|++||.+++.++++|+.+|+++++||+|+++|+|+.++|..||+++.+..||+|.+.+.+|+++++..|-..
T Consensus 86 p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~ 165 (372)
T KOG3912|consen 86 PVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVT 165 (372)
T ss_pred cceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeeccccc
Confidence 566888999999999999999999999999999999999999999999999999999999999999999999985321
Q ss_pred -CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHH-HHhhhccccccCCCCCC
Q 017885 261 -GHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFI-CLLLPFLSKLWGIPFSQ 338 (364)
Q Consensus 261 -~~s~~~~~ll~~lL~ils~i~~Ais~V~eE~~fk~~~~~lk~~ld~~~v~~w~~~fq~l~~-~lllP~~~~~~g~~f~~ 338 (364)
.-.+.++.+.|++++++|+++.|+|+|+|||.++.+ ++||...+||++.|++.+. ++..|+++.+.|.+|+-
T Consensus 166 ~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~------nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~ 239 (372)
T KOG3912|consen 166 DPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKS------NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSC 239 (372)
T ss_pred CCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhc------cCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcC
Confidence 112346778899999999999999999999988754 7999999999999995554 77789999999988988
Q ss_pred chHH
Q 017885 339 LPIY 342 (364)
Q Consensus 339 lp~~ 342 (364)
.|+.
T Consensus 240 ~~~g 243 (372)
T KOG3912|consen 240 NPRG 243 (372)
T ss_pred CCCc
Confidence 8877
No 2
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.95 E-value=6e-27 Score=231.18 Aligned_cols=189 Identities=23% Similarity=0.220 Sum_probs=155.8
Q ss_pred hhHHHHHHHHhCCCCChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchhhhcCCCcceehhhHHHHHHHHHHHHHhhhcc
Q 017885 129 VGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILS 208 (364)
Q Consensus 129 ~~N~V~~Kl~~~~~~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e~~~~p~~~f~i~GllD~~a~~L~~ia~~yts 208 (364)
+.|+....+... -.+.|.+++.+.-+....+|.+++.+|+..++.. +....++|+|+++|++|+.+|++.+.|++||+
T Consensus 27 ~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~-~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTs 104 (334)
T PF06027_consen 27 GTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWL-KVLKRPWWKYFLLALLDVEANYLVVLAYQYTS 104 (334)
T ss_pred hHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccch-hhcchhHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 344444555555 7889999996655555556666666665443322 23456779999999999999999999999999
Q ss_pred ccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCC--CCCCcchHHHHHHHHHHHHHHHHH
Q 017885 209 GASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH--SLKGAGIFWSLLMIVSFLLQAADT 286 (364)
Q Consensus 209 ~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~--s~~~~~ll~~lL~ils~i~~Ais~ 286 (364)
.++.|+|+|++|||++++|++|||+||++.|++|+++|++|+++++.+|..+++ ..+++.+.|++++++|+++||++|
T Consensus 105 vtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~n 184 (334)
T PF06027_consen 105 VTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSN 184 (334)
T ss_pred HhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998754332 346789999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHHhhhc
Q 017885 287 VLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPF 327 (364)
Q Consensus 287 V~eE~~fk~~~~~lk~~ld~~~v~~w~~~fq~l~~~lllP~ 327 (364)
|+||+.+| +.|...+.++.++|++++..+.+.+
T Consensus 185 V~~E~~v~--------~~~~~~~lg~~Glfg~ii~~iq~~i 217 (334)
T PF06027_consen 185 VLEEKLVK--------KAPRVEFLGMLGLFGFIISGIQLAI 217 (334)
T ss_pred HHHHHhcc--------cCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999887 3677888999999999887665443
No 3
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.85 E-value=7.1e-23 Score=193.35 Aligned_cols=181 Identities=19% Similarity=0.174 Sum_probs=149.6
Q ss_pred hhHHHHHHHHhCCCCChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchhhhcCCCcceehhhHHHHHHHHHHHHHhhhcc
Q 017885 129 VGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILS 208 (364)
Q Consensus 129 ~~N~V~~Kl~~~~~~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e~~~~p~~~f~i~GllD~~a~~L~~ia~~yts 208 (364)
++|....-.+..+--|-|-+++.+.-.....+|.+++.+|+ + .....|+||++.|+.|+.+|++.+.|++||+
T Consensus 31 t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~-----~~~~~~~hYilla~~DVEaNy~vV~AyQyTs 103 (336)
T KOG2766|consen 31 TSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR--K-----YIKAKWRHYILLAFVDVEANYFVVKAYQYTS 103 (336)
T ss_pred HcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh--H-----HHHHHHHHhhheeEEeecccEEEeeehhhcc
Confidence 34444555555666777877774333333335666666654 1 2233457899999999999999999999999
Q ss_pred ccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCC-CCCCcchHHHHHHHHHHHHHHHHHH
Q 017885 209 GASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH-SLKGAGIFWSLLMIVSFLLQAADTV 287 (364)
Q Consensus 209 ~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~-s~~~~~ll~~lL~ils~i~~Ais~V 287 (364)
-.+.++|+++.||..+++||+|||.||++.|+.|+++|++|+++++.+|-.+++ +.++|++.|+.++++|+.+||+|||
T Consensus 104 mtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv 183 (336)
T KOG2766|consen 104 MTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNV 183 (336)
T ss_pred hHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccc
Confidence 999999999999999999999999999999999999999999999999855444 4578999999999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHHh
Q 017885 288 LKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLL 324 (364)
Q Consensus 288 ~eE~~fk~~~~~lk~~ld~~~v~~w~~~fq~l~~~ll 324 (364)
.||++.| +.|...+.+..++|+.++..+-
T Consensus 184 ~EEflvk--------n~d~~elm~~lgLfGaIIsaIQ 212 (336)
T KOG2766|consen 184 SEEFLVK--------NADRVELMGFLGLFGAIISAIQ 212 (336)
T ss_pred cHHHHHh--------cCcHHHHHHHHHHHHHHHHHHH
Confidence 9999888 6899999999999999888775
No 4
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.69 E-value=6.2e-16 Score=150.04 Aligned_cols=189 Identities=23% Similarity=0.295 Sum_probs=145.1
Q ss_pred hhhHHHHHHHH-hCCCCC-hHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchhhhcCCCcceehhhHHHHHHHHHHHHHhh
Q 017885 128 GVGNRVLYKLA-LVPLKH-YPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGA 205 (364)
Q Consensus 128 G~~N~V~~Kl~-~~~~~~-yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e~~~~p~~~f~i~GllD~~a~~L~~ia~~ 205 (364)
-..|-++.+.. ..+.++ ||.+++.++...+..+.+....... .++..+.|.+++++++++|..+..+.+.++.
T Consensus 12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~ 86 (303)
T PF08449_consen 12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK-----FPKSRKIPLKKYAILSFLFFLASVLSNAALK 86 (303)
T ss_pred HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc-----ccCCCcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555444 444444 8999998887665554433222211 1223445668899999999999999999999
Q ss_pred hccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCCC---CCCcchHHHHHHHHHHHHH
Q 017885 206 ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHS---LKGAGIFWSLLMIVSFLLQ 282 (364)
Q Consensus 206 yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~s---~~~~~ll~~lL~ils~i~~ 282 (364)
|+|.+.+++++.+.++++|+++++++||||+..||++++++++|+++...++..+.+. ...+...|.++++++.+++
T Consensus 87 ~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~ 166 (303)
T PF08449_consen 87 YISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLD 166 (303)
T ss_pred hCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999876433221 2233445999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHHhhhc
Q 017885 283 AADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPF 327 (364)
Q Consensus 283 Ais~V~eE~~fk~~~~~lk~~ld~~~v~~w~~~fq~l~~~lllP~ 327 (364)
|++.++||+.+++| +.++..+..+...++.++.++..+.
T Consensus 167 a~~~~~qe~~~~~~------~~~~~~~mfy~n~~~~~~~~~~~~~ 205 (303)
T PF08449_consen 167 AFTGVYQEKLFKKY------GKSPWELMFYTNLFSLPFLLILLFL 205 (303)
T ss_pred HHHHHHHHHHHHHh------CCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999976 5777777777777777666554433
No 5
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.69 E-value=9.3e-17 Score=152.63 Aligned_cols=138 Identities=24% Similarity=0.302 Sum_probs=120.7
Q ss_pred cceehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCC--
Q 017885 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPG-- 261 (364)
Q Consensus 184 ~~f~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~-- 261 (364)
+++++|+++|++.|.+.++++.+++++.+|+++|+-|++|+++++++||||++..||+++++.++|++++..++....
T Consensus 18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~ 97 (244)
T PF04142_consen 18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDN 97 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccccc
Confidence 779999999999999999999999999999999999999999999999999999999999999999999998643221
Q ss_pred -C--C-----CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHHhhhc
Q 017885 262 -H--S-----LKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPF 327 (364)
Q Consensus 262 -~--s-----~~~~~ll~~lL~ils~i~~Ais~V~eE~~fk~~~~~lk~~ld~~~v~~w~~~fq~l~~~lllP~ 327 (364)
+ . ...+.+.|.+++++++++.|++.||+||++|+. +.+.+.-|.+-.+++.++.++...+
T Consensus 98 ~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~------~~s~~~~N~qL~~~gi~~~~~~~~~ 165 (244)
T PF04142_consen 98 SSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRS------NVSLWIQNMQLYLFGILFNLLALLL 165 (244)
T ss_pred ccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhccc------chhHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 0 124567889999999999999999999998854 4888888999999998887766544
No 6
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=99.62 E-value=4.8e-16 Score=132.52 Aligned_cols=79 Identities=42% Similarity=0.760 Sum_probs=74.5
Q ss_pred cccchhHHHHHHHHHHHhhhhHHHHHHHHhCCCCChHHHHHHHHHhHHHHHHHHHHHH-HHhcCCcchhhhcCCCcceeh
Q 017885 110 SNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYL-RYHAGIVTDEMLSMPKAPFVA 188 (364)
Q Consensus 110 ~~~~~~~v~il~v~lvi~G~~N~V~~Kl~~~~~~~yp~fl~q~~t~~yi~v~f~il~~-r~~~~~i~~e~~~~p~~~f~i 188 (364)
-.++++++++++++|++.|++|+|++|++..++.|||||++|+++++|+++||+++++ +++++.+|+||+.+|+|||++
T Consensus 51 ~~ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~QlTt~gyvpIffaV~lyk~y~t~~It~Emr~FPkyKFaI 130 (130)
T PF08627_consen 51 YSKENFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQLTTFGYVPIFFAVVLYKMYFTGDITKEMRAFPKYKFAI 130 (130)
T ss_pred hhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhcccceehHHHHHHHHHHHHcCCCCHHHHhCccccccC
Confidence 4478999999999999999999999999999999999999999999999999998865 688999999999999999985
No 7
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.45 E-value=2.6e-12 Score=127.76 Aligned_cols=203 Identities=14% Similarity=0.103 Sum_probs=147.6
Q ss_pred cccchhHHHHHHHHHHHhhhhHHHHHHHHhCCCCChHHHHHHHHHh-HHHHHHHHHHHHHHhc-CCcchhhhcCCCccee
Q 017885 110 SNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATF-GYVAVYFSILYLRYHA-GIVTDEMLSMPKAPFV 187 (364)
Q Consensus 110 ~~~~~~~v~il~v~lvi~G~~N~V~~Kl~~~~~~~yp~fl~q~~t~-~yi~v~f~il~~r~~~-~~i~~e~~~~p~~~f~ 187 (364)
.+..++++.+++++--.+...-.+..|+..+. .+||++++.++.+ +.+... .....++++ .+++. .+...++++
T Consensus 43 ~~~~~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~-~~~~~~~~~~~~~~~--~~~~~~~ll 118 (350)
T PTZ00343 43 FPNFKWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFAL-LYWATGFRKIPRIKS--LKLFLKNFL 118 (350)
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHH-HHHHhCCCCCCCCCC--HHHHHHHHH
Confidence 44578999888888888888888899999876 5799999998854 333211 111111111 11110 011124578
Q ss_pred hhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCCCCCCc
Q 017885 188 AVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGA 267 (364)
Q Consensus 188 i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~s~~~~ 267 (364)
.+|+|-.......+.+..+++.+..+++....++|+++++++|+|+|+++.+++|++++++|+++....+. +.
T Consensus 119 p~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~-------~~ 191 (350)
T PTZ00343 119 PQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL-------HF 191 (350)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc-------hh
Confidence 89999988888888999999999999999999999999999999999999999999999999999774221 23
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHHh
Q 017885 268 GIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLL 324 (364)
Q Consensus 268 ~ll~~lL~ils~i~~Ais~V~eE~~fk~~~~~lk~~ld~~~v~~w~~~fq~l~~~ll 324 (364)
.+.|.++.++|.+..|+.+++-++..+++. ..+.++++..+-.+...+++++.+++
T Consensus 192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~lp~ 247 (350)
T PTZ00343 192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKS-EIGENLTASNIYMLLTLIASLISLPL 247 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cccccCCHHHHHHHHHHHHHHHHHHH
Confidence 477999999999999999999999776431 01113666545444566665554443
No 8
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.42 E-value=3.6e-12 Score=123.01 Aligned_cols=186 Identities=12% Similarity=0.117 Sum_probs=139.3
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhCCCCChHHHHHHHHHh-HHHHHHHHHHHHHH---hcCCcchhhhcCCCcceehhhHH
Q 017885 117 IVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATF-GYVAVYFSILYLRY---HAGIVTDEMLSMPKAPFVAVGLL 192 (364)
Q Consensus 117 v~il~v~lvi~G~~N~V~~Kl~~~~~~~yp~fl~q~~t~-~yi~v~f~il~~r~---~~~~i~~e~~~~p~~~f~i~Gll 192 (364)
...+++..-++...-+++.|+..+. +++|.+++..+.. +.+..+ +..+. ++.+.+++ ..++++++|++
T Consensus 3 ~~~~~~~w~~~~~~~~~~NK~~l~~-~~~P~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----~~~~~~~~g~~ 74 (302)
T TIGR00817 3 TGLLFGLWYFLNVYFNIYNKKLLNV-FPYPYFKTLISLAVGSLYCL---LSWSSGLPKRLKISSA----LLKLLLPVAIV 74 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-CChhHHHHHHHHHHHHHHHH---HHHHhCCCCCCCCCHH----HHHHHHHHHHH
Confidence 3445666666677777888998875 7899999987743 333222 11111 11111111 12457888999
Q ss_pred HHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCCCCCCcchHHH
Q 017885 193 EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWS 272 (364)
Q Consensus 193 D~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~s~~~~~ll~~ 272 (364)
-+....+.+.++.|++.+..+++..+.++|+++++++|+|+|++..+++|++++++|+++....+ .+....|+
T Consensus 75 ~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~-------~~~~~~G~ 147 (302)
T TIGR00817 75 HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE-------LSFNWAGF 147 (302)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc-------ccccHHHH
Confidence 88999999999999999999999999999999999999999999999999999999998753211 13346799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHH
Q 017885 273 LLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICL 323 (364)
Q Consensus 273 lL~ils~i~~Ais~V~eE~~fk~~~~~lk~~ld~~~v~~w~~~fq~l~~~l 323 (364)
++.++|.+..|+.+++.++..++ +++|+..+..|...++.+..++
T Consensus 148 ~~~l~a~~~~a~~~v~~k~~~~~------~~~~~~~~~~~~~~~~~~~l~p 192 (302)
T TIGR00817 148 LSAMISNITFVSRNIFSKKAMTI------KSLDKTNLYAYISIMSLFLLSP 192 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc------CCCCcccHHHHHHHHHHHHHHH
Confidence 99999999999999999985442 1488888888888777655433
No 9
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.19 E-value=3.3e-10 Score=112.01 Aligned_cols=136 Identities=20% Similarity=0.183 Sum_probs=116.7
Q ss_pred cceehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecC---CCC
Q 017885 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG---SNP 260 (364)
Q Consensus 184 ~~f~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~---s~~ 260 (364)
.|..+|+++-++.|.+.++++.+.++..+|+..|.-|..|++++.++|+||.+..||...++-++|+.++-.+. .++
T Consensus 93 lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a 172 (345)
T KOG2234|consen 93 LKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGA 172 (345)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCc
Confidence 68899999999999999999999999999999999999999999999999999999999999999999998432 221
Q ss_pred C-CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHHhh
Q 017885 261 G-HSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLL 325 (364)
Q Consensus 261 ~-~s~~~~~ll~~lL~ils~i~~Ais~V~eE~~fk~~~~~lk~~ld~~~v~~w~~~fq~l~~~lll 325 (364)
. .....|.+.|....+.+|...+.+.||=|+++|+. +.+.+.-|---.+|+.++.++..
T Consensus 173 ~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s------~~s~wi~NiqL~~~g~~f~~l~~ 232 (345)
T KOG2234|consen 173 KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGS------NVSLWIRNIQLYFFGILFNLLTI 232 (345)
T ss_pred cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcC------CchHHHHHHHHHHHHHHHHHHHH
Confidence 1 23457889999999999999999999999998853 57777777766777776665543
No 10
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.13 E-value=1.1e-09 Score=109.81 Aligned_cols=196 Identities=17% Similarity=0.199 Sum_probs=129.2
Q ss_pred chhHHHHHHHHHHHhhhhHHHHHHHHhCC-CCChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcch-hhhcCCCcceehhh
Q 017885 113 RRVEIVIAAAVTVLLGVGNRVLYKLALVP-LKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTD-EMLSMPKAPFVAVG 190 (364)
Q Consensus 113 ~~~~v~il~v~lvi~G~~N~V~~Kl~~~~-~~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~-e~~~~p~~~f~i~G 190 (364)
|..+..+.++++=+.-....++.|.+.+. +.+.+ +..+++..-..+.+++.+.+.+....++ +.++ ..+++++|
T Consensus 10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~--~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~--~~~l~l~g 85 (358)
T PLN00411 10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYP--FLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSI--LSKIGLLG 85 (358)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccH--HHHHHHHHHHHHHHHHHHHHHHhcccCcchHHH--HHHHHHHH
Confidence 34555555666666666777788887643 44433 5555643322222333333322111111 1111 13467778
Q ss_pred HHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHH------hcCcccccccchhhheeeeeeEEeecCCCC----
Q 017885 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIF------LGRRYRVNQLFGCFLVGIGVIITVASGSNP---- 260 (364)
Q Consensus 191 llD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iF------LkrRy~~~q~lGv~ivliGvivv~~s~s~~---- 260 (364)
++-.....+.+.|++||+++...++..+.+.|+++++++| +|+|.+..+++|++++++|+.++...+...
T Consensus 86 ~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~ 165 (358)
T PLN00411 86 FLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVA 165 (358)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 7775566688899999999999999999999999999999 699999999999999999998866432100
Q ss_pred --------------CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHH
Q 017885 261 --------------GHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQAL 319 (364)
Q Consensus 261 --------------~~s~~~~~ll~~lL~ils~i~~Ais~V~eE~~fk~~~~~lk~~ld~~~v~~w~~~fq~l 319 (364)
.....++.++++++.++|+++.|+.+++.++..++| .++.....|...+..+
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~-------~~~~~~t~~~~~~~~~ 231 (358)
T PLN00411 166 SSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEY-------PAAFTVSFLYTVCVSI 231 (358)
T ss_pred cccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------CcHhHHHHHHHHHHHH
Confidence 001112236688999999999999999999876643 3444556666555433
No 11
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.09 E-value=3.2e-09 Score=102.47 Aligned_cols=166 Identities=13% Similarity=0.150 Sum_probs=122.2
Q ss_pred cchhHHHHHHHHHHHhhhhHHHHHHHHhCCCCChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchhhhcCCCcceehhhH
Q 017885 112 DRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGL 191 (364)
Q Consensus 112 ~~~~~v~il~v~lvi~G~~N~V~~Kl~~~~~~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e~~~~p~~~f~i~Gl 191 (364)
|.-++++.+++.+.++|+.|.++.|...+.+.+ +.+..++.+.-..+.+++...+ +++.++ .++ +.++++.|.
T Consensus 4 ~~~~~~~~~~~~~~~iWg~~~~~~K~~~~~~~p--~~~~~~R~~~a~l~ll~~~~~~--~~~~~~-~~~--~~~~~~~g~ 76 (292)
T PRK11272 4 RQLLPLFGALFALYIIWGSTYLVIRIGVESWPP--LMMAGVRFLIAGILLLAFLLLR--GHPLPT-LRQ--WLNAALIGL 76 (292)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCH--HHHHHHHHHHHHHHHHHHHHHh--CCCCCc-HHH--HHHHHHHHH
Confidence 345778888999999999999999998886655 6677777544333333333222 211111 111 133566776
Q ss_pred HH-HHHHHHHHHHh-hhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCCCCCCcch
Q 017885 192 LE-ALAAATGMAAG-AILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGI 269 (364)
Q Consensus 192 lD-~~a~~L~~ia~-~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~s~~~~~l 269 (364)
+- +....+.+.+. .+++.+...++....++++++++.+ +|+|+++.+++|+++.++|++++...+.. +...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~------~~~~ 149 (292)
T PRK11272 77 LLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL------SGNP 149 (292)
T ss_pred HHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc------ccch
Confidence 64 45667778888 7999999999999999999999985 69999999999999999999886533211 2335
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 017885 270 FWSLLMIVSFLLQAADTVLKEV 291 (364)
Q Consensus 270 l~~lL~ils~i~~Ais~V~eE~ 291 (364)
.|+++.++|.+++|+.+++.++
T Consensus 150 ~G~l~~l~a~~~~a~~~~~~~~ 171 (292)
T PRK11272 150 WGAILILIASASWAFGSVWSSR 171 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 7899999999999999999887
No 12
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.05 E-value=3e-09 Score=99.42 Aligned_cols=172 Identities=17% Similarity=0.063 Sum_probs=121.0
Q ss_pred hhhHHHHHHHHhCCCCChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchhhhcCCCcceehhhH-HHHHHHHHHHHHhhh
Q 017885 128 GVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGL-LEALAAATGMAAGAI 206 (364)
Q Consensus 128 G~~N~V~~Kl~~~~~~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e~~~~p~~~f~i~Gl-lD~~a~~L~~ia~~y 206 (364)
|+.+.+..|...+...+ |+.....+.+.-..+... +. +.+ .+++. .+++++.|. +-.+...+.+.|..|
T Consensus 1 Wg~~~~~~k~~~~~~~~-~~~~~~~r~~~~~l~l~~-~~-~~~---~~~~~----~~~~~~~~~~~~~l~~~~~~~a~~~ 70 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVP-LYFAVFRRLIFALLLLLP-LL-RRR---PPLKR----LLRLLLLGALQIGVFYVLYFVAVKR 70 (260)
T ss_pred CcchHHHHHHHHhcCCC-HHHHHHHHHHHHHHHHHH-HH-Hhc---cCHhH----HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56788999998776433 344443333322222211 11 111 11111 134566664 467777888999999
Q ss_pred ccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCCCCCCcchHHHHHHHHHHHHHHHHH
Q 017885 207 LSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADT 286 (364)
Q Consensus 207 ts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~s~~~~~ll~~lL~ils~i~~Ais~ 286 (364)
++.+...++.+..+.++++++.+|+|+|.++.|++|++++++|++++..++. .+....+.++.++|.+..|+.+
T Consensus 71 ~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~------~~~~~~G~~~~l~a~~~~a~~~ 144 (260)
T TIGR00950 71 LPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGN------LSINPAGLLLGLGSGISFALGT 144 (260)
T ss_pred cChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCc------ccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999765431 1344678999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHH
Q 017885 287 VLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFI 321 (364)
Q Consensus 287 V~eE~~fk~~~~~lk~~ld~~~v~~w~~~fq~l~~ 321 (364)
++..+..+++ +.+...++.|...++.++.
T Consensus 145 ~~~k~~~~~~------~~~~~~~~~~~~~~~~~~l 173 (260)
T TIGR00950 145 VLYKRLVKKE------GPELLQFTGWVLLLGALLL 173 (260)
T ss_pred HHHhHHhhcC------CchHHHHHHHHHHHHHHHH
Confidence 9988854422 3445566667766665444
No 13
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.96 E-value=2.1e-08 Score=97.02 Aligned_cols=176 Identities=17% Similarity=0.212 Sum_probs=120.2
Q ss_pred HHHHHHHhhhhHHHHHHHHhCCCCChHHHHHHHHHhH-HHHHHHHHHHHHHhcCCcchhhhcCCCcceehhhHHHHHHH-
Q 017885 120 AAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFG-YVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAA- 197 (364)
Q Consensus 120 l~v~lvi~G~~N~V~~Kl~~~~~~~yp~fl~q~~t~~-yi~v~f~il~~r~~~~~i~~e~~~~p~~~f~i~GllD~~a~- 197 (364)
++++..++|+.|.++.|...+.+. |+....++... .+++. . +.+ +.+ .+++..+..|++-....
T Consensus 8 ~~l~~~~~Wg~~~~~~k~~~~~~~--p~~~~~~R~~~a~~~l~-~--~~~--~~~-------~~~~~~~~~g~~~~~~~~ 73 (299)
T PRK11453 8 LALLVVVVWGLNFVVIKVGLHNMP--PLMLAGLRFMLVAFPAI-F--FVA--RPK-------VPLNLLLGYGLTISFGQF 73 (299)
T ss_pred HHHHHHHHHhhhHHHHHHHHhcCC--HHHHHHHHHHHHHHHHH-H--Hhc--CCC-------CchHHHHHHHHHHHHHHH
Confidence 466778899999999999987655 57777777543 22221 1 111 111 11122344455433333
Q ss_pred HHHHHHhhh-ccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCCCCCCcchHHHHHHH
Q 017885 198 ATGMAAGAI-LSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMI 276 (364)
Q Consensus 198 ~L~~ia~~y-ts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~s~~~~~ll~~lL~i 276 (364)
.+.+.+..| +|++...++.++.++++++++++|+|+|++..+++|+++.++|+.+...++.++ .+....++++.+
T Consensus 74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~----~~~~~~G~~l~l 149 (299)
T PRK11453 74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG----QHVAMLGFMLTL 149 (299)
T ss_pred HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC----cchhHHHHHHHH
Confidence 345566677 577888999999999999999999999999999999999999998877543211 123457899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHH
Q 017885 277 VSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQA 318 (364)
Q Consensus 277 ls~i~~Ais~V~eE~~fk~~~~~lk~~ld~~~v~~w~~~fq~ 318 (364)
+|+++.|+.+++.++..++. ++.+...+..|......
T Consensus 150 ~aal~~a~~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 186 (299)
T PRK11453 150 AAAFSWACGNIFNKKIMSHS-----TRPAVMSLVVWSALIPI 186 (299)
T ss_pred HHHHHHHHHHHHHHHHhccc-----CccchhHHHHHHHHHHH
Confidence 99999999999999854321 12444455556555543
No 14
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.93 E-value=3.5e-08 Score=95.43 Aligned_cols=162 Identities=11% Similarity=0.004 Sum_probs=111.8
Q ss_pred HHHHHHHhhhhHHHHHHHHhCCCCChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchhhhcCCCcceehhhHHHHHHHH-
Q 017885 120 AAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAA- 198 (364)
Q Consensus 120 l~v~lvi~G~~N~V~~Kl~~~~~~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e~~~~p~~~f~i~GllD~~a~~- 198 (364)
+.++-.++|+.|.+..|...+.+.+ +.++.++...-..+.+.+ .+ ..+. ++. +++.++.+.+-.....
T Consensus 8 ~~l~a~~~Wg~~~~~~k~~~~~~~P--~~~~~~R~~~a~l~l~~~--~~--~~~~----~~~-~~~~~~~~~l~~~~~~~ 76 (295)
T PRK11689 8 IGLIAILLWSTMVGLIRGVSESLGP--VGGAAMIYSVSGLLLLLT--VG--FPRL----RQF-PKRYLLAGGLLFVSYEI 76 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCh--HHHHHHHHHHHHHHHHHH--cc--cccc----ccc-cHHHHHHHhHHHHHHHH
Confidence 4566677799999999999887655 777777753322222211 11 1111 111 2345566655443333
Q ss_pred HHHHHhh----hccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCC-CCC---CCCCcchH
Q 017885 199 TGMAAGA----ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSN-PGH---SLKGAGIF 270 (364)
Q Consensus 199 L~~ia~~----yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~-~~~---s~~~~~ll 270 (364)
+.+.+.. ++++....++....++|+++++++|+|+|+++.+++|+++.++|+.++..++.+ +.. ...+....
T Consensus 77 ~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~ 156 (295)
T PRK11689 77 CLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPL 156 (295)
T ss_pred HHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChH
Confidence 3444544 456677789999999999999999999999999999999999999988865421 100 01123456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 017885 271 WSLLMIVSFLLQAADTVLKEVI 292 (364)
Q Consensus 271 ~~lL~ils~i~~Ais~V~eE~~ 292 (364)
|+++.++|++++|+.+++-++.
T Consensus 157 G~~~~l~aa~~~A~~~v~~k~~ 178 (295)
T PRK11689 157 SYGLAFIGAFIWAAYCNVTRKY 178 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc
Confidence 8999999999999999999984
No 15
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.77 E-value=7.2e-08 Score=93.35 Aligned_cols=158 Identities=14% Similarity=0.090 Sum_probs=106.3
Q ss_pred HHHHHHHHHhhhhHHHHHHHHhCCCCChHHHHHHHHH-hHHHHHHHHHHHHHHhcCCcchhhh-cCCCcceehhh-HHHH
Q 017885 118 VIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLAT-FGYVAVYFSILYLRYHAGIVTDEML-SMPKAPFVAVG-LLEA 194 (364)
Q Consensus 118 ~il~v~lvi~G~~N~V~~Kl~~~~~~~yp~fl~q~~t-~~yi~v~f~il~~r~~~~~i~~e~~-~~p~~~f~i~G-llD~ 194 (364)
.+++++-.+.++.+.++.|.. ..+. |..+...+. ++.+.+ ..+...+.+.... +... +.+.+...+.+ ++=.
T Consensus 10 ~~~~l~a~~~wg~~~~~~k~~-~~~~--~~~~~~~R~~~a~~~l-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 84 (296)
T PRK15430 10 VLLALAAYFIWGIAPAYFKLI-YYVP--ADEILTHRVIWSFFFM-VVLMSICRQWSYL-KTLIQTPQKIFMLAVSAVLIG 84 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cCCC--HHHHHHHHHHHHHHHH-HHHHHHHccHHHH-HHHHcCHHHHHHHHHHHHHHH
Confidence 445666667788899999986 3344 455665554 333222 2222222110000 0001 11112223344 4455
Q ss_pred HHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCCCCCCcchHHHHH
Q 017885 195 LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLL 274 (364)
Q Consensus 195 ~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~s~~~~~ll~~lL 274 (364)
....+.+.|..++|.+...++..+.++++++++++|+|+|.++.+|+|++++++|++++..++. +. .++
T Consensus 85 ~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~-------~~----~~~ 153 (296)
T PRK15430 85 GNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG-------SL----PII 153 (296)
T ss_pred HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC-------Cc----cHH
Confidence 5677888888899999999999999999999999999999999999999999999998764421 11 145
Q ss_pred HHHHHHHHHHHHHHHHH
Q 017885 275 MIVSFLLQAADTVLKEV 291 (364)
Q Consensus 275 ~ils~i~~Ais~V~eE~ 291 (364)
.++|++++|+.+++.++
T Consensus 154 ~l~aa~~~a~~~i~~r~ 170 (296)
T PRK15430 154 ALGLAFSFAFYGLVRKK 170 (296)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 77889999999999887
No 16
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=98.75 E-value=1.7e-07 Score=92.63 Aligned_cols=200 Identities=20% Similarity=0.297 Sum_probs=150.3
Q ss_pred chhHHHHHHHHHHHhhhhHHHHHHHHhCC-CCChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchhh--hcCCCcceehh
Q 017885 113 RRVEIVIAAAVTVLLGVGNRVLYKLALVP-LKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEM--LSMPKAPFVAV 189 (364)
Q Consensus 113 ~~~~v~il~v~lvi~G~~N~V~~Kl~~~~-~~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e~--~~~p~~~f~i~ 189 (364)
+.+...+....-.++.....+..|...++ -++||.+++.++++.-.... +..+.. +..+... .+.+.+..+.+
T Consensus 14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~---~v~~~l-~~~~~~~~~~~~~~~~llpl 89 (316)
T KOG1441|consen 14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALAL---LVIKVL-KLVPPSKISSKLPLRTLLPL 89 (316)
T ss_pred hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHH---HHHHHh-cCCCCCccccccchHHHHHH
Confidence 44555555666666777777788888887 68999999977432211111 111111 1111111 22344667889
Q ss_pred hHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCCCCCCcch
Q 017885 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGI 269 (364)
Q Consensus 190 GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~s~~~~~l 269 (364)
|++-..+..++..++.|+|.+..|+.-...+|++.++++++.+++|+..-++-++.++.|+.+....+. +-.+
T Consensus 90 ~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~-------~fn~ 162 (316)
T KOG1441|consen 90 GLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL-------SFNL 162 (316)
T ss_pred HHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc-------cccH
Confidence 999999999999999999999999999999999999999999999999999999999999999876432 4467
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHHhhhccc
Q 017885 270 FWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLS 329 (364)
Q Consensus 270 l~~lL~ils~i~~Ais~V~eE~~fk~~~~~lk~~ld~~~v~~w~~~fq~l~~~lllP~~~ 329 (364)
+|-+..++|.+..+.++++.|+.+++. +.++|...+-...+-.++++.++ |+..
T Consensus 163 ~G~i~a~~s~~~~al~~I~~~~ll~~~----~~~~~~~~ll~y~ap~s~~~Ll~--P~~~ 216 (316)
T KOG1441|consen 163 FGFISAMISNLAFALRNILSKKLLTSK----GESLNSMNLLYYTAPISLIFLLI--PFLD 216 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcc----ccccCchHHHHHhhhHHHHHHhc--chHh
Confidence 888999999999999999999988531 23588888888888887655442 6543
No 17
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.72 E-value=7.2e-08 Score=90.91 Aligned_cols=158 Identities=16% Similarity=0.046 Sum_probs=108.9
Q ss_pred HHHHHHHHhhhhHHHHHHHHhCCCCChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchhhhc-CCCc----ceehhhHHH
Q 017885 119 IAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLS-MPKA----PFVAVGLLE 193 (364)
Q Consensus 119 il~v~lvi~G~~N~V~~Kl~~~~~~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e~~~-~p~~----~f~i~GllD 193 (364)
++.++-.++++.|.++.|... .+. |+.+...+.+.-.++.+.+...+.++.. .++..+ .+++ ...+.|++=
T Consensus 5 ~~~i~a~~~wg~~~~~~k~~~-~~~--~~~i~~~R~~~a~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~ 80 (256)
T TIGR00688 5 IVSLLASFLFGYMYYYSKLLK-PLP--ATDILGHRMIWSFPFMLLSVTLFRQWAA-LIERLKRIQKRPLILSLLLCGLLI 80 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhc-cCC--HHHHHHHHHHHHHHHHHHHHHHHcchHH-HHHHHhCcccchHHHHHHHHHHHH
Confidence 345566677999999999843 333 4667766754322222222222211100 011111 1111 145567777
Q ss_pred HHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCCCCCCcchHHHH
Q 017885 194 ALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSL 273 (364)
Q Consensus 194 ~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~s~~~~~ll~~l 273 (364)
.....+.+.|.+|++.+...++.++.+.|+++++++|+|+|.++.+|+|+++.++|++++..++. +.. +
T Consensus 81 ~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~-------~~~----~ 149 (256)
T TIGR00688 81 GFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG-------SLP----W 149 (256)
T ss_pred HHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC-------Cch----H
Confidence 77888889999999999999999999999999999999999999999999999999987654421 111 3
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 017885 274 LMIVSFLLQAADTVLKEV 291 (364)
Q Consensus 274 L~ils~i~~Ais~V~eE~ 291 (364)
+.+++++++|+-+++.++
T Consensus 150 ~~l~aa~~~a~~~i~~~~ 167 (256)
T TIGR00688 150 EALVLAFSFTAYGLIRKA 167 (256)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 567889999999999887
No 18
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.69 E-value=3.7e-07 Score=89.07 Aligned_cols=170 Identities=15% Similarity=0.161 Sum_probs=136.0
Q ss_pred CChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchhhhcCCCcceehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHH
Q 017885 143 KHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVW 222 (364)
Q Consensus 143 ~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e~~~~p~~~f~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~Ipf 222 (364)
+++|-|+..++.++-+.+-. .+.+.++.. .....|.|+|...++-+.+++.+++.|+.|++=+.+.+--..=++-
T Consensus 48 F~~~~fL~~~q~l~~~~~s~--~~l~~~k~~---~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIP 122 (327)
T KOG1581|consen 48 FEHSLFLVFCQRLVALLVSY--AMLKWWKKE---LSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIP 122 (327)
T ss_pred ccccHHHHHHHHHHHHHHHH--HHHhccccc---CCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhH
Confidence 77899999888877666553 233333322 2334677999999999999999999999999999999888888888
Q ss_pred HHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCCC--CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 017885 223 QILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHS--LKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRL 300 (364)
Q Consensus 223 T~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~s--~~~~~ll~~lL~ils~i~~Ais~V~eE~~fk~~~~~l 300 (364)
+|++-.+.-|+||+..+|+.++++.+|+.+-...+++++.+ ...|++.|.+|+...-.+.++-|..+.++|+.+
T Consensus 123 Vmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~---- 198 (327)
T KOG1581|consen 123 VMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKY---- 198 (327)
T ss_pred HHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccC----
Confidence 99999999999999999999999999999877654333222 225999999999999999999999999999965
Q ss_pred cCCCChhhHHHHHHHHHHHHHHH
Q 017885 301 KGGVDLFVVNSYGSAFQALFICL 323 (364)
Q Consensus 301 k~~ld~~~v~~w~~~fq~l~~~l 323 (364)
++..+.+.....+|.+++...
T Consensus 199 --k~s~~~mM~~vNLf~~i~~~~ 219 (327)
T KOG1581|consen 199 --KVSSLHMMFGVNLFSAILNGT 219 (327)
T ss_pred --CccHhHHHHHHHHHHHHHHHH
Confidence 577776666666666555433
No 19
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=98.66 E-value=1.7e-07 Score=93.65 Aligned_cols=151 Identities=29% Similarity=0.269 Sum_probs=123.1
Q ss_pred ehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCC-CCC
Q 017885 187 VAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH-SLK 265 (364)
Q Consensus 187 ~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~-s~~ 265 (364)
+....+=.++++....|+.||+.+++.+|+.+.=.||+.++.+|..+|+++.+.+++++.+.|++++...|+.+.+ ..+
T Consensus 163 l~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a 242 (416)
T KOG2765|consen 163 LFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPA 242 (416)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCc
Confidence 4456667789999999999999999999999999999999999999999999999999999999999998765433 355
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHHhhhccccccCCCCCCchHH
Q 017885 266 GAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFLSKLWGIPFSQLPIY 342 (364)
Q Consensus 266 ~~~ll~~lL~ils~i~~Ais~V~eE~~fk~~~~~lk~~ld~~~v~~w~~~fq~l~~~lllP~~~~~~g~~f~~lp~~ 342 (364)
++..+|+++-++|++.||+=.|.-.+...+. ++++|.-.+-|+.++|.++...+.+.++... |.+-.++|+.
T Consensus 243 ~~~llG~llaL~sA~~YavY~vllk~~~~~e----g~rvdi~lffGfvGLfnllllwP~l~iL~~~-~~e~F~lP~~ 314 (416)
T KOG2765|consen 243 SRPLLGNLLALLSALLYAVYTVLLKRKIGDE----GERVDIQLFFGFVGLFNLLLLWPPLIILDFF-GEERFELPSS 314 (416)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhcccc----cccccHHHHHHHHHHHHHHHHhHHHHHHHHh-ccCcccCCCC
Confidence 7789999999999999999998877744432 2359999999999999887766544333333 4444455543
No 20
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.62 E-value=1.6e-06 Score=80.92 Aligned_cols=168 Identities=21% Similarity=0.149 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHhCCCCChHHHHHHH-HHhHHHHHHHHHHHHHHhcCCcchhhhcCCCcceeh-hhHHH
Q 017885 116 EIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQL-ATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVA-VGLLE 193 (364)
Q Consensus 116 ~v~il~v~lvi~G~~N~V~~Kl~~~~~~~yp~fl~q~-~t~~yi~v~f~il~~r~~~~~i~~e~~~~p~~~f~i-~GllD 193 (364)
...+..+...+.+..+....|...+. +.|.+...+ +.+.-... .+....+... .......+.++.++ -+++.
T Consensus 7 ~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 80 (292)
T COG0697 7 LGLLALLLWGLLWGLSFIALKLAVES--LDPFLFAAALRFLIAALL---LLPLLLLEPR-GLRPALRPWLLLLLLALLGL 80 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc--cCChHHHHHHHHHHHHHH---HHHHHHhhcc-cccccccchHHHHHHHHHHH
Confidence 33444555557888888888888876 444444433 22221111 1111111110 00111111223344 45677
Q ss_pred HHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHH-HHhcCcccccccchhhheeeeeeEEeecCCCCCCCCCCcchHHH
Q 017885 194 ALAAATGMAAGAILSGASIPILSQTFLVWQILLSI-IFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWS 272 (364)
Q Consensus 194 ~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~-iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~s~~~~~ll~~ 272 (364)
.....+.+.+..+++.+...++..+.+.++.++++ +++|+|.++.++.|.++.++|++++..++..... . ...+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~---~-~~~g~ 156 (292)
T COG0697 81 ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGI---L-SLLGL 156 (292)
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchh---H-HHHHH
Confidence 88888888888899999999999999999999997 7779999999999999999999999988643221 1 57889
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 017885 273 LLMIVSFLLQAADTVLKEVIF 293 (364)
Q Consensus 273 lL~ils~i~~Ais~V~eE~~f 293 (364)
++.+++.+..|+.+++.++..
T Consensus 157 ~~~l~a~~~~a~~~~~~~~~~ 177 (292)
T COG0697 157 LLALAAALLWALYTALVKRLS 177 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999853
No 21
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.58 E-value=3.8e-08 Score=82.45 Aligned_cols=100 Identities=20% Similarity=0.188 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHhcCCcchhhhcCCCcceehhhHHHH-HHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccc
Q 017885 159 AVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEA-LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRV 237 (364)
Q Consensus 159 ~v~f~il~~r~~~~~i~~e~~~~p~~~f~i~GllD~-~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~ 237 (364)
++...+...+.+.+...++.++.+.+.....|++.. .+..+.+.|..++++ ...++.+..++|+++++++|+|+|.+.
T Consensus 10 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~ 88 (113)
T PF13536_consen 10 LFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSP 88 (113)
T ss_pred HHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCH
Confidence 333333444433333333333333334455588886 888888888889995 777999999999999999999999999
Q ss_pred cccchhhheeeeeeEEeecCCC
Q 017885 238 NQLFGCFLVGIGVIITVASGSN 259 (364)
Q Consensus 238 ~q~lGv~ivliGvivv~~s~s~ 259 (364)
.+++|++++++|++++..++.+
T Consensus 89 ~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 89 RRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999999999988654
No 22
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.53 E-value=7.1e-07 Score=85.59 Aligned_cols=103 Identities=10% Similarity=0.005 Sum_probs=84.2
Q ss_pred cceehh-hHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCC
Q 017885 184 APFVAV-GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH 262 (364)
Q Consensus 184 ~~f~i~-GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~ 262 (364)
+.+++. |+.......+.+.|+++++.+...++..+.++++++++++|+|+|++.++|+|+.++++|+.++..++..
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~--- 139 (281)
T TIGR03340 63 WLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA--- 139 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc---
Confidence 334444 5567888888899999999999999999999999999999999999999999999999999987655321
Q ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Q 017885 263 SLKGAGIFWSLLMIVSFLLQAADTVLKEVI 292 (364)
Q Consensus 263 s~~~~~ll~~lL~ils~i~~Ais~V~eE~~ 292 (364)
.....+.++.+++.+++|+.+++.++.
T Consensus 140 ---~~~~~g~~~~l~aal~~a~~~i~~k~~ 166 (281)
T TIGR03340 140 ---QHRRKAYAWALAAALGTAIYSLSDKAA 166 (281)
T ss_pred ---ccchhHHHHHHHHHHHHHHhhhhcccc
Confidence 112345567889999999999876653
No 23
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=98.39 E-value=4.5e-07 Score=74.33 Aligned_cols=122 Identities=21% Similarity=0.172 Sum_probs=85.7
Q ss_pred hhhhHHHHHHHHhCCCCChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchhhhcCCCcceehhhHH-HHHHHHHHHHHhh
Q 017885 127 LGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLL-EALAAATGMAAGA 205 (364)
Q Consensus 127 ~G~~N~V~~Kl~~~~~~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e~~~~p~~~f~i~Gll-D~~a~~L~~ia~~ 205 (364)
+++...++.|...++..+ ...+..+.+.-.+ .+.+.....+.+ .++........+++.|.+ -..+..+.+.|..
T Consensus 2 ~~a~~~~~~k~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 2 SWAIYSVFSKKLLKKISP--LSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred eeeeHHHHHHHHhccCCH--HHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 467788889998888443 4444444322222 222222222221 011111111346677877 5889999999999
Q ss_pred hccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEE
Q 017885 206 ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (364)
Q Consensus 206 yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv 253 (364)
+++++...++....++++++++++++|+|++..+++|++++++|++++
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998764
No 24
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=98.29 E-value=6.3e-07 Score=86.38 Aligned_cols=168 Identities=17% Similarity=0.196 Sum_probs=108.9
Q ss_pred chhHHHHHHHHHHHhhhhHHHHHHHHhCCCCChHHHHHHHHHhHHHHHHHHHH-HHHHhcCCcchhhhcCCCcceehh-h
Q 017885 113 RRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSIL-YLRYHAGIVTDEMLSMPKAPFVAV-G 190 (364)
Q Consensus 113 ~~~~v~il~v~lvi~G~~N~V~~Kl~~~~~~~yp~fl~q~~t~~yi~v~f~il-~~r~~~~~i~~e~~~~p~~~f~i~-G 190 (364)
.+..++.+.+. ..+-++-.++.|...+ -|.-+++.+.++=..+-.+++ ++++.- .-++ ++++++++ |
T Consensus 36 p~~gl~l~~vs-~ff~~~~vv~t~~~e~----~p~e~a~~r~l~~mlit~pcliy~~~~v-~gp~-----g~R~~LiLRg 104 (346)
T KOG4510|consen 36 PNLGLLLLTVS-YFFNSCMVVSTKVLEN----DPMELASFRLLVRMLITYPCLIYYMQPV-IGPE-----GKRKWLILRG 104 (346)
T ss_pred CccCceehhhH-HHHhhHHHhhhhhhcc----ChhHhhhhhhhhehhhhheEEEEEeeee-ecCC-----CcEEEEEeeh
Confidence 44444444444 4555666666666543 344455544222111111221 222110 0122 23555555 8
Q ss_pred HHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecC----CC-CCC-CC
Q 017885 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG----SN-PGH-SL 264 (364)
Q Consensus 191 llD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~----s~-~~~-s~ 264 (364)
+.-..+-.+++.++.|.+.+=..+..-+.+.||.++||++||+||+.++.+|..+.+.|+++.+-|. +. .+. +.
T Consensus 105 ~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s 184 (346)
T KOG4510|consen 105 FMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSS 184 (346)
T ss_pred hhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccc
Confidence 8899999999999999999999999999999999999999999999999999999999999999873 11 111 11
Q ss_pred C-CcchHHHHHHHHHHHHHHHHHHHHHH
Q 017885 265 K-GAGIFWSLLMIVSFLLQAADTVLKEV 291 (364)
Q Consensus 265 ~-~~~ll~~lL~ils~i~~Ais~V~eE~ 291 (364)
. +....+...-+.|.+..|.-.++-.+
T Consensus 185 ~~~~~~~gt~aai~s~lf~asvyIilR~ 212 (346)
T KOG4510|consen 185 QVEYDIPGTVAAISSVLFGASVYIILRY 212 (346)
T ss_pred cccccCCchHHHHHhHhhhhhHHHHHHH
Confidence 1 23344566777777777666665555
No 25
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.28 E-value=4.5e-05 Score=73.76 Aligned_cols=157 Identities=12% Similarity=-0.056 Sum_probs=104.2
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhCCCCChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchhhhcCCCcceehhhHHHHHH
Q 017885 117 IVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALA 196 (364)
Q Consensus 117 v~il~v~lvi~G~~N~V~~Kl~~~~~~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e~~~~p~~~f~i~GllD~~a 196 (364)
+..++++++. ++.|.++.|...+...+ +.+...+...-.++.+.+. +.++...+++. +++.++.|++-...
T Consensus 14 ~~~~~la~~~-~~~~~~~~K~~~~~~~~--~~~~~~R~~~a~l~l~~~~--~~~~~~~~~~~----~~~~~~~g~~~~~~ 84 (293)
T PRK10532 14 ILLLLIAMAS-IQSGASLAKSLFPLVGA--PGVTALRLALGTLILIAIF--KPWRLRFAKEQ----RLPLLFYGVSLGGM 84 (293)
T ss_pred HHHHHHHHHH-HHhhHHHHHHHHHHcCH--HHHHHHHHHHHHHHHHHHH--hHHhccCCHHH----HHHHHHHHHHHHHH
Confidence 3334444444 55777799999886555 5566666543332222221 21111112111 13356778888888
Q ss_pred HHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCCCCCCcchHHHHHHH
Q 017885 197 AATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMI 276 (364)
Q Consensus 197 ~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~s~~~~~ll~~lL~i 276 (364)
+.+.+.+.+|+|.+...++..+.+.++++++. +|.+. +.++.+.++|+.++..++.+. ++....|+++.+
T Consensus 85 ~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~~--~~~~~i~~~Gv~li~~~~~~~----~~~~~~G~ll~l 154 (293)
T PRK10532 85 NYLFYLSIQTVPLGIAVALEFTGPLAVALFSS----RRPVD--FVWVVLAVLGLWFLLPLGQDV----SHVDLTGAALAL 154 (293)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHHhc----CChHH--HHHHHHHHHHHheeeecCCCc----ccCChHHHHHHH
Confidence 88888999999999999999888989888773 55544 456777889988776543221 123467999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 017885 277 VSFLLQAADTVLKEVI 292 (364)
Q Consensus 277 ls~i~~Ais~V~eE~~ 292 (364)
+|.+++|+.+++-++.
T Consensus 155 ~aa~~~a~~~v~~r~~ 170 (293)
T PRK10532 155 GAGACWAIYILSGQRA 170 (293)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998874
No 26
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.27 E-value=5.8e-06 Score=71.85 Aligned_cols=133 Identities=23% Similarity=0.257 Sum_probs=95.9
Q ss_pred HHHHHHHHhhhhHHHHHHHHhCCCCChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchhhhcCCCcceehh-hHHHHHHH
Q 017885 119 IAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAV-GLLEALAA 197 (364)
Q Consensus 119 il~v~lvi~G~~N~V~~Kl~~~~~~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e~~~~p~~~f~i~-GllD~~a~ 197 (364)
+++++-..+.+...++.|+-.+.+-+ -|-+..+++.-..+...+++. ..+.+.+.| ..-+.|-|++. |+.-.++-
T Consensus 6 ~~ALLsA~fa~L~~iF~KIGl~~vdp--~~At~IRtiVi~~~l~~v~~~-~g~~~~~~~-~~~k~~lflilSGla~glsw 81 (140)
T COG2510 6 IYALLSALFAGLTPIFAKIGLEGVDP--DFATTIRTIVILIFLLIVLLV-TGNWQAGGE-IGPKSWLFLILSGLAGGLSW 81 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccCc--cHHHHHHHHHHHHHHHHHHHh-cCceecccc-cCcceehhhhHHHHHHHHHH
Confidence 45666677889999999999887654 566666665433322222221 111111111 12222667776 56677777
Q ss_pred HHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEee
Q 017885 198 ATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA 255 (364)
Q Consensus 198 ~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~ 255 (364)
.+-|.|+..=.+|...-++-+.+.++.++|++|||+|++..+|+|+.++++|.+++..
T Consensus 82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 7888888888888889999999999999999999999999999999999999998753
No 27
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=98.02 E-value=3.7e-06 Score=81.36 Aligned_cols=96 Identities=23% Similarity=0.295 Sum_probs=76.2
Q ss_pred HHhh-hccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCCC------CC---Ccc---
Q 017885 202 AAGA-ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHS------LK---GAG--- 268 (364)
Q Consensus 202 ia~~-yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~s------~~---~~~--- 268 (364)
.|.. ..|-++-.+.|.....-+|+++++.+||||+..|+..++++.+|+++.-...+.++.+ .+ +..
T Consensus 83 ~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w 162 (330)
T KOG1583|consen 83 YALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWW 162 (330)
T ss_pred ceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHH
Confidence 3444 6778888999999999999999999999999999999999999999977632221110 11 111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017885 269 IFWSLLMIVSFLLQAADTVLKEVIFLDAA 297 (364)
Q Consensus 269 ll~~lL~ils~i~~Ais~V~eE~~fk~~~ 297 (364)
.+|+.+..+|.+..|..-.|+|...++|-
T Consensus 163 ~iGi~lL~~al~~sa~mgiyqE~~Y~kyG 191 (330)
T KOG1583|consen 163 LIGIALLVFALLLSAYMGIYQETTYQKYG 191 (330)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44678888999999999999999988773
No 28
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.87 E-value=0.0005 Score=66.82 Aligned_cols=102 Identities=21% Similarity=0.124 Sum_probs=84.1
Q ss_pred hHHHHHHHHHHHHHhhhccccHHHHhcc-hhHHHHHHHHHHHhcCcccccc----cchhhheeeeeeEEeecCCCCCCCC
Q 017885 190 GLLEALAAATGMAAGAILSGASIPILSQ-TFLVWQILLSIIFLGRRYRVNQ----LFGCFLVGIGVIITVASGSNPGHSL 264 (364)
Q Consensus 190 GllD~~a~~L~~ia~~yts~s~~~mL~q-s~IpfT~llS~iFLkrRy~~~q----~lGv~ivliGvivv~~s~s~~~~s~ 264 (364)
|++-..+++..+.+..++..+....+.+ ..+.++.+++.+++|+|.+..+ ++|++++++|++++...+.++.+.+
T Consensus 66 G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~ 145 (290)
T TIGR00776 66 GAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIK 145 (290)
T ss_pred HHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccc
Confidence 4557889999999999999999988888 6677899999999999999999 9999999999999877643221101
Q ss_pred C-CcchHHHHHHHHHHHHHHHHHHHHHH
Q 017885 265 K-GAGIFWSLLMIVSFLLQAADTVLKEV 291 (364)
Q Consensus 265 ~-~~~ll~~lL~ils~i~~Ais~V~eE~ 291 (364)
+ .+...+.++-++|.+.+|...+.-++
T Consensus 146 ~~~~~~~Gi~~~l~sg~~y~~~~~~~~~ 173 (290)
T TIGR00776 146 SEFNFKKGILLLLMSTIGYLVYVVVAKA 173 (290)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 0 33366999999999999999999886
No 29
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=97.65 E-value=0.00044 Score=64.58 Aligned_cols=130 Identities=16% Similarity=0.111 Sum_probs=83.6
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHhCCCCChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchhhhcCCCcceehhhHHH-HH
Q 017885 117 IVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLE-AL 195 (364)
Q Consensus 117 v~il~v~lvi~G~~N~V~~Kl~~~~~~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e~~~~p~~~f~i~GllD-~~ 195 (364)
=.++.++-.++++.+.+..|...+...+.+...+..+.+.-.++.++..... .... ...... ....+..|.+. ..
T Consensus 129 G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~-~~~~~~--~~~~~~~~~~~~~~ 204 (260)
T TIGR00950 129 GLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFL-GPNP-QALSLQ--WGALLYLGLIGTAL 204 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhc-CCCC-CcchHH--HHHHHHHHHHHHHH
Confidence 3345556666777888888888765554333333222211111111111111 1110 000000 12245567665 56
Q ss_pred HHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeee
Q 017885 196 AAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGV 250 (364)
Q Consensus 196 a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGv 250 (364)
+..+.+.+..+++++....+....+++++++++++++++++..+++|+.+++.|+
T Consensus 205 ~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 205 AYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 7777777888999999999999999999999999999999999999999999886
No 30
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=97.38 E-value=0.00023 Score=67.94 Aligned_cols=133 Identities=15% Similarity=0.199 Sum_probs=90.9
Q ss_pred CCcceehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCC
Q 017885 182 PKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPG 261 (364)
Q Consensus 182 p~~~f~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~ 261 (364)
|.|.|+.-++--.++-.-..-|++|+|=+.+.+=...=++=+|++-++|+||+|++.+|.+++++++|+++-..-...-+
T Consensus 84 ~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~ 163 (337)
T KOG1580|consen 84 PTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVG 163 (337)
T ss_pred cchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccC
Confidence 33445444433333334445566677766654444444555789999999999999999999999999998776422111
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHH
Q 017885 262 HSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAF 316 (364)
Q Consensus 262 ~s~~~~~ll~~lL~ils~i~~Ais~V~eE~~fk~~~~~lk~~ld~~~v~~w~~~f 316 (364)
+.....-.+|-+|.++|-...++--+.+|++=+.| +-.+.--.++.|.|.+++
T Consensus 164 g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~y--q~~g~~MM~~~NlwStL~ 216 (337)
T KOG1580|consen 164 GAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASY--QRTGTSMMFYTNLWSTLY 216 (337)
T ss_pred CCcccccchHHHHHHHHHHhcccchhHHHHHHHhh--ccCchhhHHHHHHHHHHH
Confidence 12234556788999999999999999999975555 222234567888888776
No 31
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=97.36 E-value=0.0023 Score=63.13 Aligned_cols=175 Identities=15% Similarity=0.212 Sum_probs=115.4
Q ss_pred HHHHHHHhCCCCChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchhhhcCCC----cceehhhHHHHHHHHHHHHHhhhc
Q 017885 132 RVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPK----APFVAVGLLEALAAATGMAAGAIL 207 (364)
Q Consensus 132 ~V~~Kl~~~~~~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e~~~~p~----~~f~i~GllD~~a~~L~~ia~~yt 207 (364)
+-..|+.... +++|-|.+.++...= ..|+.+..+-++...++....+.+ ++.+.-|++.+.--=+...+..|+
T Consensus 32 tf~~~~~~~~-f~fPLf~ts~h~~v~--flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yV 108 (349)
T KOG1443|consen 32 TFYFKWLTKN-FHFPLFVTSLHLAVK--FLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALATALDIGLSNWSLEYV 108 (349)
T ss_pred HHHhhhhhcC-cCCchHHHHHHHHHH--HHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhhhcccccccceeeee
Confidence 4444444433 788888886664321 122333332222222221112222 234455666666667888999999
Q ss_pred cccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCCCCCCcchHHHHHHHHHHHHHHHHHH
Q 017885 208 SGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTV 287 (364)
Q Consensus 208 s~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~s~~~~~ll~~lL~ils~i~~Ais~V 287 (364)
+.+.+.|-..++|.|.+++|.+|-=+|+++.-.+=++++.+|+++...-.+ +-.+.|-.++..|.++.++-=+
T Consensus 109 tlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT-------qf~i~Gf~lv~~aS~~sGlRW~ 181 (349)
T KOG1443|consen 109 TLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST-------QFNIEGFFLVLAASLLSGLRWA 181 (349)
T ss_pred eeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc-------ceeehhHHHHHHHHHhhhhhHH
Confidence 999999999999999999999997788888777777777788888765432 3457788999999999999999
Q ss_pred HHHHHHHHHHhhhcCCCC-hhhHHHHHHHH
Q 017885 288 LKEVIFLDAAQRLKGGVD-LFVVNSYGSAF 316 (364)
Q Consensus 288 ~eE~~fk~~~~~lk~~ld-~~~v~~w~~~f 316 (364)
+.++++++..-...++.| .+++.-|-++.
T Consensus 182 ~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~ 211 (349)
T KOG1443|consen 182 FTQMLLRNQPSAKRNPIDTIFHLQPWMSIG 211 (349)
T ss_pred HHHHHHhcCccccCCCeeeHHHhhhHHHHH
Confidence 999999975111112333 33455565554
No 32
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=97.33 E-value=0.0003 Score=68.37 Aligned_cols=185 Identities=16% Similarity=0.212 Sum_probs=133.5
Q ss_pred eeeeccccccccchhHHHHHHHHHHHhhhhHHHHHHHHhC--CCCChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchhh
Q 017885 101 TVEFNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALV--PLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEM 178 (364)
Q Consensus 101 ~~~~~~~~~~~~~~~~v~il~v~lvi~G~~N~V~~Kl~~~--~~~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e~ 178 (364)
+..++..+| ++ -.+..++..+.-..-..|-.+..+..+ .+.+|-|+++..++..|..+....+ ..+..+.
T Consensus 30 llg~~ls~k-pk-w~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~------~~~~~k~ 101 (367)
T KOG1582|consen 30 LLGFNLSDK-PK-WTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIEL------QLIQTKR 101 (367)
T ss_pred EEeeccccC-ch-hhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEE------Eeecccc
Confidence 444543333 32 245555555554445555555555544 4677889999999888865542111 1123344
Q ss_pred hcCCCcceehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCC
Q 017885 179 LSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGS 258 (364)
Q Consensus 179 ~~~p~~~f~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s 258 (364)
+..|++-|.+++++.+-.-=|..-.+.|+.=+.|.|.-+.=+.=+|+.+.++=++||...++..+.+..+|++.--..|+
T Consensus 102 r~iP~rtY~~la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs 181 (367)
T KOG1582|consen 102 RVIPWRTYVILAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADS 181 (367)
T ss_pred eecchhHhhhhHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhccc
Confidence 56788889999988777777777777799999999999998888999999999999999999999999999998777776
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017885 259 NPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDA 296 (364)
Q Consensus 259 ~~~~s~~~~~ll~~lL~ils~i~~Ais~V~eE~~fk~~ 296 (364)
...+ .-++.|..++-.|-+..|+---.||+.++.+
T Consensus 182 ~~sP---NF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~ 216 (367)
T KOG1582|consen 182 QTSP---NFNLIGVMMISGALLADAVIGNVQEKAMKMN 216 (367)
T ss_pred ccCC---CcceeeHHHHHHHHHHHHHhhHHHHHHHhhC
Confidence 5333 3456677777777788888888899999965
No 33
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.12 E-value=0.00048 Score=67.77 Aligned_cols=74 Identities=24% Similarity=0.427 Sum_probs=66.2
Q ss_pred ceehhh-HHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCC
Q 017885 185 PFVAVG-LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGS 258 (364)
Q Consensus 185 ~f~i~G-llD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s 258 (364)
+..+.| +++.++..+.++|+.+.|.++.+-|....++++++++..+||+|.++.+++|+.++++|.++++..+.
T Consensus 51 ~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~ 125 (300)
T PF05653_consen 51 PLWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAP 125 (300)
T ss_pred HHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCC
Confidence 445566 45788999999999999999999999999999999999999999999999999999999998876543
No 34
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.10 E-value=0.0039 Score=61.62 Aligned_cols=167 Identities=17% Similarity=0.162 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHhCCCCChHHHHHH--HHHhHHHHHHHHHHHHHHhcCCcchhhhcCCC-cceehhhHH
Q 017885 116 EIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQ--LATFGYVAVYFSILYLRYHAGIVTDEMLSMPK-APFVAVGLL 192 (364)
Q Consensus 116 ~v~il~v~lvi~G~~N~V~~Kl~~~~~~~yp~fl~q--~~t~~yi~v~f~il~~r~~~~~i~~e~~~~p~-~~f~i~Gll 192 (364)
+-+..++.+.+....-++.-|+.... +|||..+.. .|.+..+.+. +...+.|.++-+..++.. +|++.+.++
T Consensus 12 ~~l~sa~~Y~~sS~lm~vvNK~vls~-y~f~~~l~l~~~Q~l~s~~~v----~~lk~~~lv~~~~l~~~~~kk~~P~~~l 86 (314)
T KOG1444|consen 12 SPLLSALFYCLSSILMTVVNKIVLSS-YNFPMGLLLMLLQSLASVLVV----LVLKRLGLVNFRPLDLRTAKKWFPVSLL 86 (314)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHHHHH----HHHHHhceeecCCcChHHHHHHccHHHH
Confidence 33566788888888888888998763 344444443 5555444332 122233333323222221 566777777
Q ss_pred HHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCCCCCCcchHHH
Q 017885 193 EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWS 272 (364)
Q Consensus 193 D~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~s~~~~~ll~~ 272 (364)
=...-+....++.|.+.+++.+++...|.++++.=..|+|+|++..-|..++..++|-.+...+|.. -...|-
T Consensus 87 f~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~s-------f~~~gY 159 (314)
T KOG1444|consen 87 FVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLS-------FNLRGY 159 (314)
T ss_pred HHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccce-------ecchhH
Confidence 7777888888888999999999999999999999999999999999999999988887777666532 122345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 017885 273 LLMIVSFLLQAADTVLKEVIFL 294 (364)
Q Consensus 273 lL~ils~i~~Ais~V~eE~~fk 294 (364)
..++..++..+.-.++-++..+
T Consensus 160 ~w~~~n~~~~a~~~v~~kk~vd 181 (314)
T KOG1444|consen 160 SWALANCLTTAAFVVYVKKSVD 181 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc
Confidence 5667788888888999888555
No 35
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.10 E-value=0.00078 Score=65.61 Aligned_cols=115 Identities=16% Similarity=0.162 Sum_probs=88.6
Q ss_pred hhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCCCCCCcchHHHHHHHHHHHHHH
Q 017885 204 GAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQA 283 (364)
Q Consensus 204 ~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~s~~~~~ll~~lL~ils~i~~A 283 (364)
+.|++.+.+++=|....|||.++++.+||.|=+..-..||+++++|-.+ |.+.+++.+.-++.|.++-+.|.+..|
T Consensus 123 L~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l----GvdqE~~~~~ls~~GvifGVlaSl~vA 198 (347)
T KOG1442|consen 123 LKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL----GVDQEGSTGTLSWIGVIFGVLASLAVA 198 (347)
T ss_pred hhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhee----ccccccccCccchhhhHHHHHHHHHHH
Confidence 4588899999999999999999999999999999999999999988776 333444455778899999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCh-hhHHHHHHHHHHHHHHHhhhccc
Q 017885 284 ADTVLKEVIFLDAAQRLKGGVDL-FVVNSYGSAFQALFICLLLPFLS 329 (364)
Q Consensus 284 is~V~eE~~fk~~~~~lk~~ld~-~~v~~w~~~fq~l~~~lllP~~~ 329 (364)
+-.+|..+..- .-.|. +.+..+.+++..+..++++-++.
T Consensus 199 lnaiytkk~l~-------~v~~~iw~lt~ynnv~a~lLflpll~lng 238 (347)
T KOG1442|consen 199 LNAIYTKKVLP-------PVGDCIWRLTAYNNVNALLLFLPLLILNG 238 (347)
T ss_pred HHHHhhheecc-------cccCeehhhHHHHHHHHHHHHHHHHHHcc
Confidence 99999886422 11343 44555667776655544444433
No 36
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=96.99 E-value=0.0044 Score=53.34 Aligned_cols=67 Identities=27% Similarity=0.392 Sum_probs=61.0
Q ss_pred eehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeE
Q 017885 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (364)
Q Consensus 186 f~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGviv 252 (364)
+++.|++-...++..+.-..++++...++++..=.+.+.++|+++++++.+..+++|..++++|+++
T Consensus 84 ~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 84 LILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 4556777888888888888899999999999999999999999999999999999999999999865
No 37
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=96.90 E-value=0.0011 Score=63.54 Aligned_cols=67 Identities=27% Similarity=0.409 Sum_probs=59.7
Q ss_pred eehh-hHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeE
Q 017885 186 FVAV-GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (364)
Q Consensus 186 f~i~-GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGviv 252 (364)
.+.. +++...+..+.+.+..+.+++....+....++++.+++++++|++.+..|++|..++++|+.+
T Consensus 213 ~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 213 SATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 3344 466777888888999999999999999999999999999999999999999999999999865
No 38
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.83 E-value=0.0057 Score=56.65 Aligned_cols=108 Identities=18% Similarity=0.062 Sum_probs=82.5
Q ss_pred ehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCCCCCC
Q 017885 187 VAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKG 266 (364)
Q Consensus 187 ~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~s~~~ 266 (364)
.+|+..=...+.+.+.+..+..+.-.+.. |.-+..+++++...++++++..||.+......|+.++......+.....+
T Consensus 3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 3 SVPIHIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred cccchHHHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 45556666677778888887777778888 99999999999999999999999998887777777665432211112234
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017885 267 AGIFWSLLMIVSFLLQAADTVLKEVIFLD 295 (364)
Q Consensus 267 ~~ll~~lL~ils~i~~Ais~V~eE~~fk~ 295 (364)
+.+.+..+.+.++...+...+|+|+.+|+
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~ 110 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKD 110 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccC
Confidence 66777788889999999999999998774
No 39
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=96.75 E-value=0.004 Score=62.67 Aligned_cols=68 Identities=12% Similarity=0.188 Sum_probs=59.1
Q ss_pred hhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeec
Q 017885 189 VGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (364)
Q Consensus 189 ~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s 256 (364)
.|+.-.++..+.+.+..+.+++...+..-..+++++++++++|+++++..|++|++++++|+.++..+
T Consensus 262 ~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~ 329 (358)
T PLN00411 262 MAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG 329 (358)
T ss_pred HHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 34444556666667778999999999999999999999999999999999999999999999987654
No 40
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=96.67 E-value=0.0018 Score=54.63 Aligned_cols=64 Identities=13% Similarity=0.048 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEe
Q 017885 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (364)
Q Consensus 191 llD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~ 254 (364)
++-..+.++...+....|.+....+-+..+.++++++++++|+|.+..|++|+.++++|+++++
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3345566777777788999988777779999999999999999999999999999999998764
No 41
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=96.65 E-value=0.011 Score=57.21 Aligned_cols=70 Identities=17% Similarity=0.113 Sum_probs=60.6
Q ss_pred ehhhHHHHHHHH-HHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeec
Q 017885 187 VAVGLLEALAAA-TGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (364)
Q Consensus 187 ~i~GllD~~a~~-L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s 256 (364)
+.+|++-+...+ +.+.+.++++++...++....++++.++++++++++++..|++|+.+++.|++.....
T Consensus 212 l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 212 LAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 467777654444 6688888999999999999999999999999999999999999999999888876543
No 42
>PRK11689 aromatic amino acid exporter; Provisional
Probab=96.55 E-value=0.009 Score=57.87 Aligned_cols=71 Identities=11% Similarity=0.005 Sum_probs=62.4
Q ss_pred eehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeec
Q 017885 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (364)
Q Consensus 186 f~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s 256 (364)
.+..|+.-.++..+.+.+..+++++...++.-..+++++++++++|+++++..|++|++++++|+.+....
T Consensus 218 l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 218 LLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 34556666777888889999999999999999999999999999999999999999999999998776543
No 43
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.45 E-value=0.01 Score=57.80 Aligned_cols=136 Identities=19% Similarity=0.183 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHhCCCCChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchh---hhcCCC--cceehhh
Q 017885 116 EIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDE---MLSMPK--APFVAVG 190 (364)
Q Consensus 116 ~v~il~v~lvi~G~~N~V~~Kl~~~~~~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e---~~~~p~--~~f~i~G 190 (364)
-++++++.+ ++.+...+..|...++.+..++-.....++.-++..+....... .++..+. ..+-|. ...++.+
T Consensus 155 G~~ll~~sl-~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~-~~~~~~~~~f~~~~p~~~~~l~~~s 232 (303)
T PF08449_consen 155 GIILLLLSL-LLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLP-TGEFRSAIRFISAHPSVLLYLLLFS 232 (303)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH-hhHhhHHHHHHHHhHHHHHHHHHHH
Confidence 344444444 44555666667776666666654444443222222222221100 1110000 011111 2345567
Q ss_pred HHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEE
Q 017885 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (364)
Q Consensus 191 llD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv 253 (364)
++-.++....+.-....++....+....--++|+++|+++.+++++..||+|+++++.|+.+-
T Consensus 233 ~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~ 295 (303)
T PF08449_consen 233 LTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLY 295 (303)
T ss_pred HHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHH
Confidence 777777777776666888888899999999999999999999999999999999999998763
No 44
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=96.11 E-value=0.019 Score=55.48 Aligned_cols=69 Identities=12% Similarity=0.026 Sum_probs=59.3
Q ss_pred eehhhHH-HHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEe
Q 017885 186 FVAVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (364)
Q Consensus 186 f~i~Gll-D~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~ 254 (364)
.+.+|++ -..+..+.+.+.++.+++...++.-..+++++++++++++++++..|++|+.++++|+.+..
T Consensus 215 i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~ 284 (292)
T PRK11272 215 LGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVT 284 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHH
Confidence 3445655 45666677788889999999999999999999999999999999999999999999987743
No 45
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=95.91 E-value=0.028 Score=54.62 Aligned_cols=72 Identities=19% Similarity=0.140 Sum_probs=64.8
Q ss_pred cceehhhHHHHHHHHHHHHHhh-hccccHHHHhcchhHHHHHHHHHHHhcCccccccc----chhhheeeeeeEEee
Q 017885 184 APFVAVGLLEALAAATGMAAGA-ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQL----FGCFLVGIGVIITVA 255 (364)
Q Consensus 184 ~~f~i~GllD~~a~~L~~ia~~-yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~----lGv~ivliGvivv~~ 255 (364)
++-++.|++-..+..+.+.+.+ +.+.+...++.+.-++.+.+++++++|++.+..|+ +|+++++.|+++.+.
T Consensus 212 ~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 212 LLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 4455689888888888889999 99999999999999999999999999999999999 999999999887654
No 46
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=95.87 E-value=0.041 Score=51.20 Aligned_cols=70 Identities=27% Similarity=0.385 Sum_probs=62.0
Q ss_pred ceehhhHHHH-HHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEe
Q 017885 185 PFVAVGLLEA-LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (364)
Q Consensus 185 ~f~i~GllD~-~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~ 254 (364)
.+...|++.. ++.++.+.+....+++...++.-..+++++++++++++++++..+++|+.+++.|+++..
T Consensus 216 ~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~ 286 (292)
T COG0697 216 LLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence 3566777777 588888999999999999999999999999999999999999999999999999887654
No 47
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.60 E-value=0.02 Score=56.87 Aligned_cols=72 Identities=19% Similarity=0.327 Sum_probs=62.1
Q ss_pred eehhhHHH-HHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecC
Q 017885 186 FVAVGLLE-ALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG 257 (364)
Q Consensus 186 f~i~GllD-~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~ 257 (364)
....|++- .++...-|.|+.+-|.++..-|....++.+++++..|||+|.+..-.+||+++++|-.+.+.-.
T Consensus 66 ~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ha 138 (335)
T KOG2922|consen 66 LWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHA 138 (335)
T ss_pred HHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEec
Confidence 44555543 3466677788889999999999999999999999999999999999999999999998888744
No 48
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=95.54 E-value=0.071 Score=51.66 Aligned_cols=70 Identities=16% Similarity=0.228 Sum_probs=62.9
Q ss_pred ehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeec
Q 017885 187 VAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (364)
Q Consensus 187 ~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s 256 (364)
+..|.....+..+.+.+..+.+++...++.-..++++.++++++++++++..|++|+.++++|+.+...+
T Consensus 217 ~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~ 286 (296)
T PRK15430 217 IAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD 286 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456678888899999999999999999999999999999999999999999999999998888776654
No 49
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=95.26 E-value=0.08 Score=52.89 Aligned_cols=62 Identities=11% Similarity=0.062 Sum_probs=52.8
Q ss_pred HHHHHHHHHHH----HHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeE
Q 017885 191 LLEALAAATGM----AAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (364)
Q Consensus 191 llD~~a~~L~~----ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGviv 252 (364)
++..+..++.. .+..++++...++.+..-.+++.++|+++++++.+..|++|++++++|+++
T Consensus 280 ~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~l 345 (350)
T PTZ00343 280 FFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALL 345 (350)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence 33444444444 577799999999999999999999999999999999999999999999865
No 50
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=95.06 E-value=0.16 Score=47.80 Aligned_cols=97 Identities=16% Similarity=0.154 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCCCCCCCCCcchH
Q 017885 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIF 270 (364)
Q Consensus 191 llD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~s~~~~~ll 270 (364)
.+=..++++-..|+...+++...-+.+.---|+.+++++.||.|+...+++.+.+.+.|+++....|... ..+++
T Consensus 61 i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~-----a~e~i 135 (290)
T KOG4314|consen 61 IFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH-----ADEII 135 (290)
T ss_pred EEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh-----hhhhh
Confidence 3345589999999999999999999999999999999999999999999999999999999988776432 45688
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 017885 271 WSLLMIVSFLLQAADTVLKEVI 292 (364)
Q Consensus 271 ~~lL~ils~i~~Ais~V~eE~~ 292 (364)
|+...+.|+...|+--|.=+++
T Consensus 136 Gi~~AV~SA~~aAlYKV~FK~~ 157 (290)
T KOG4314|consen 136 GIACAVGSAFMAALYKVLFKMF 157 (290)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 8887788877777655554443
No 51
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=94.97 E-value=0.13 Score=49.92 Aligned_cols=71 Identities=15% Similarity=0.140 Sum_probs=57.9
Q ss_pred eehhhHHHHH-HHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeec
Q 017885 186 FVAVGLLEAL-AAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (364)
Q Consensus 186 f~i~GllD~~-a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s 256 (364)
.+.+|++-.. +..+.+.+..+.++....++.-..+++++++++++|+++++..|++|..++++|+.+...+
T Consensus 217 l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 217 LMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 4556655544 4445556667889988899999999999999999999999999999999999999876544
No 52
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=94.97 E-value=0.025 Score=48.32 Aligned_cols=71 Identities=14% Similarity=0.065 Sum_probs=62.8
Q ss_pred cceehhhHHHHHHHHHHHHHhhhccccHHH-HhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEe
Q 017885 184 APFVAVGLLEALAAATGMAAGAILSGASIP-ILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (364)
Q Consensus 184 ~~f~i~GllD~~a~~L~~ia~~yts~s~~~-mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~ 254 (364)
|+|+++=+++..+..+-+..+...+.|+.. +-+.....||++.++++-++..+...++|+.+++.|+.+++
T Consensus 42 ~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lcv 113 (113)
T PF10639_consen 42 PKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALCV 113 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeeeC
Confidence 668888889999999999999999999885 55899999999999877777778889999999999998863
No 53
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=94.85 E-value=0.13 Score=44.74 Aligned_cols=115 Identities=15% Similarity=0.085 Sum_probs=72.7
Q ss_pred HHHHHHHhhhhHHHHHHHHhCCCCChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchhhhcCCCcceehhh-HHHHHHHH
Q 017885 120 AAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVG-LLEALAAA 198 (364)
Q Consensus 120 l~v~lvi~G~~N~V~~Kl~~~~~~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e~~~~p~~~f~i~G-llD~~a~~ 198 (364)
++++-+++++.-.++.|+..++.++-+.....+ ...+ . ...+..+++.| ++-.++.+
T Consensus 6 ~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~~------~~~~-----~-----------~~~p~~~i~lgl~~~~la~~ 63 (129)
T PRK02971 6 WGLASVLLASVAQLSLKWGMSRLPLLSHAWDFI------AALL-----A-----------FGLALRAVLLGLAGYALSML 63 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCccchhHHH------HHHH-----H-----------HhccHHHHHHHHHHHHHHHH
Confidence 445555566777888999887765522211100 0000 0 00011133334 34555666
Q ss_pred HHHHHhhhccccHHHHhcchhHHHHHHHHHH--HhcCcccccccchhhheeeeeeEEeec
Q 017885 199 TGMAAGAILSGASIPILSQTFLVWQILLSII--FLGRRYRVNQLFGCFLVGIGVIITVAS 256 (364)
Q Consensus 199 L~~ia~~yts~s~~~mL~qs~IpfT~llS~i--FLkrRy~~~q~lGv~ivliGvivv~~s 256 (364)
+-..++...+.+...-+......++++.++. |++++.+..|++|+.++++|++++..+
T Consensus 64 ~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 64 CWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 6667777788777766655555677777774 899999999999999999999997654
No 54
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=94.76 E-value=0.16 Score=46.93 Aligned_cols=67 Identities=13% Similarity=0.155 Sum_probs=60.1
Q ss_pred eehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeE
Q 017885 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (364)
Q Consensus 186 f~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGviv 252 (364)
...+.++.+.++.+...-..|.+.....+....-+.++.++|+++.+++++..+|+|+.+|+.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 3456677888888888888899999999999999999999999999999999999999999999865
No 55
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=94.65 E-value=0.076 Score=51.29 Aligned_cols=57 Identities=21% Similarity=0.225 Sum_probs=50.1
Q ss_pred HHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEee
Q 017885 199 TGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA 255 (364)
Q Consensus 199 L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~ 255 (364)
+.+.+..+++++...++...-.++++++++++++++.+..|++|..++++|+.+...
T Consensus 237 ~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~ 293 (302)
T TIGR00817 237 VAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR 293 (302)
T ss_pred HHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence 444577799999999998888888889999999999999999999999999877543
No 56
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=93.93 E-value=0.043 Score=47.32 Aligned_cols=73 Identities=10% Similarity=0.132 Sum_probs=59.1
Q ss_pred ceehhhHHHHHHHHHHHHHhhhccccHH-HHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecC
Q 017885 185 PFVAVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG 257 (364)
Q Consensus 185 ~f~i~GllD~~a~~L~~ia~~yts~s~~-~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~ 257 (364)
++++.-++=.++-++...+..+.|.++. .+..+.-+..+.+++++|++++.+..+++|+.++++|++++-..+
T Consensus 32 ~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 32 GFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 3455555566667777777778887765 666788999999999999999999999999999999998876543
No 57
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=90.78 E-value=0.16 Score=43.00 Aligned_cols=61 Identities=23% Similarity=0.216 Sum_probs=47.7
Q ss_pred HHHHHHHHhhhccccHH-HHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeec
Q 017885 196 AAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (364)
Q Consensus 196 a~~L~~ia~~yts~s~~-~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s 256 (364)
+-++...+....|.++. .+..+.-+..+.++++++++++.+..+++|..++++|++.+-..
T Consensus 43 sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 43 SFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 33334444555665554 66677888889999999999999999999999999999987544
No 58
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=90.70 E-value=0.16 Score=42.99 Aligned_cols=68 Identities=12% Similarity=0.021 Sum_probs=56.4
Q ss_pred eehhhHHHHHHHHHHHHHhhhccccHH-HHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEE
Q 017885 186 FVAVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (364)
Q Consensus 186 f~i~GllD~~a~~L~~ia~~yts~s~~-~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv 253 (364)
.+++-.+=.++-++.-.+..+.|.++. .+-.+.-+..+.+.+++|+|++.+..|++|+.++++|++.+
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 344455566677777777778887765 78888889999999999999999999999999999998764
No 59
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=89.91 E-value=0.95 Score=44.25 Aligned_cols=69 Identities=22% Similarity=0.200 Sum_probs=58.0
Q ss_pred cceehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCccccccc----chhhheeeeeeE
Q 017885 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQL----FGCFLVGIGVII 252 (364)
Q Consensus 184 ~~f~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~----lGv~ivliGviv 252 (364)
|+=++-|++-..++..++++.+..-....-.|.|..++.+.+...++||++=+++|+ +|++++++|.++
T Consensus 196 ~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 196 WKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred HHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 556788999999999999999999999999999999999999999999976666655 466666666543
No 60
>PRK11431 multidrug efflux system protein; Provisional
Probab=88.15 E-value=0.38 Score=40.50 Aligned_cols=67 Identities=16% Similarity=0.049 Sum_probs=53.7
Q ss_pred hhhHHHHHHHHHHHHHhhhccccHH-HHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEe
Q 017885 188 AVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (364)
Q Consensus 188 i~GllD~~a~~L~~ia~~yts~s~~-~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~ 254 (364)
+.-.+=..+-++...+....|.++. .+-.+.-+..+.+.+++|.|++.+..|++|+.++++|++..-
T Consensus 34 ~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 34 ITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 3344445566666666677776654 788888899999999999999999999999999999998753
No 61
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=88.01 E-value=0.51 Score=39.95 Aligned_cols=71 Identities=18% Similarity=0.099 Sum_probs=58.3
Q ss_pred cceehhhHHHHHHHHHHHHHhhhccccHH-HHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEe
Q 017885 184 APFVAVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (364)
Q Consensus 184 ~~f~i~GllD~~a~~L~~ia~~yts~s~~-~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~ 254 (364)
++.+++-.+=..+-++.-.+..+.|.++. .+-.+.-+.-+.+.+++|++++.+..+++|..++++|++..-
T Consensus 31 ~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk 102 (106)
T COG2076 31 WPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK 102 (106)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence 44555556666666777777778887765 888999999999999999999999999999999999987643
No 62
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=87.70 E-value=11 Score=36.99 Aligned_cols=147 Identities=16% Similarity=0.109 Sum_probs=96.3
Q ss_pred CCCChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchhhhcCCCcceehhhHHHHHHHHHHHHHhhhccccHHH-Hhcchh
Q 017885 141 PLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIP-ILSQTF 219 (364)
Q Consensus 141 ~~~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e~~~~p~~~f~i~GllD~~a~~L~~ia~~yts~s~~~-mL~qs~ 219 (364)
+++-+|.-+..-++++-+.+-....+ ..+...+.+...+ +--++-|++=++++..++.+..+...|... +=.+.-
T Consensus 7 k~gG~~~~Q~lG~t~Gali~alv~~~--~~~p~~~~~~~~~--~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~Q 82 (269)
T PF06800_consen 7 KIGGKPANQILGTTIGALIFALVVFL--FRQPAFSMSGTSF--IVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQ 82 (269)
T ss_pred eeCCcHHHHHHHHHHHHHHHHHHHHH--HhCCCcchHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHH
Confidence 45566766666666665544432222 2222222101111 112445889999999999999999888774 444777
Q ss_pred HHHHHHHHHHHhcCcccccccc----hhhheeeeeeEEeecCCCCCCC-CCCcchHHHHHHHHHHHHHHHHHHHHHH
Q 017885 220 LVWQILLSIIFLGRRYRVNQLF----GCFLVGIGVIITVASGSNPGHS-LKGAGIFWSLLMIVSFLLQAADTVLKEV 291 (364)
Q Consensus 220 IpfT~llS~iFLkrRy~~~q~l----Gv~ivliGvivv~~s~s~~~~s-~~~~~ll~~lL~ils~i~~Ais~V~eE~ 291 (364)
++.+.++..+++++--+..+++ +++++++|+.+....+.+++.+ +..+..-+.+..+++++-|-.=.+.-+.
T Consensus 83 Lvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~ 159 (269)
T PF06800_consen 83 LVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA 159 (269)
T ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999866666554 7778889998888876544332 2345566788888888888776666544
No 63
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=87.09 E-value=2.2 Score=40.33 Aligned_cols=156 Identities=15% Similarity=0.149 Sum_probs=103.7
Q ss_pred eeeeccccccccchhHHHHHHHHHHHhhhhHHHHHHHHhC--CCCChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchh-
Q 017885 101 TVEFNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALV--PLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDE- 177 (364)
Q Consensus 101 ~~~~~~~~~~~~~~~~v~il~v~lvi~G~~N~V~~Kl~~~--~~~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e- 177 (364)
++|..-..+|++..+-=+.+++.-..+...-.|++|+..- .+++-..|.+.+-++-.|..+|+-+.. +..+....+
T Consensus 120 iVmiay~DN~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL-~~T~VE~~qs 198 (290)
T KOG4314|consen 120 IVMIAYADNEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALIL-AFTGVEHLQS 198 (290)
T ss_pred EEEEEeccchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHH-HHhchHHHHH
Confidence 4444334556655444444444444455555666666532 467766666655555555555544332 233221111
Q ss_pred hhcCCCcceehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecC
Q 017885 178 MLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG 257 (364)
Q Consensus 178 ~~~~p~~~f~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~ 257 (364)
--..||-.+.=++.+-+.-+++..+|...+.+-+..+=.-..||-....-.+|-+-..+...+.|..++.+|.++...|.
T Consensus 199 FA~~PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 199 FAAAPWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred HhhCCchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 12346666777888899999999999999988888776666788888888888888888999999999999999988884
No 64
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=86.55 E-value=1.4 Score=35.87 Aligned_cols=56 Identities=16% Similarity=0.103 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHhhhccccHH-HHhcchhHHHHHHHHHHHhcCcccccccchhhhe
Q 017885 191 LLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLV 246 (364)
Q Consensus 191 llD~~a~~L~~ia~~yts~s~~-~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~iv 246 (364)
.+=..+-++...+..+.|.++. .+..+.-+..+.+.+.+|.|++.+..|++|+.++
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3455566677777778888876 8889999999999999999999999999998763
No 65
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=85.27 E-value=4.9 Score=40.44 Aligned_cols=64 Identities=14% Similarity=0.148 Sum_probs=52.4
Q ss_pred HHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecC
Q 017885 194 ALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG 257 (364)
Q Consensus 194 ~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~ 257 (364)
..-..++-+...++++....+=--+..|+++++.+++-|.+++...++|.+++++|+++-....
T Consensus 244 f~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~ 307 (334)
T PF06027_consen 244 FLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE 307 (334)
T ss_pred HHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence 3334455555667888877777778899999999999999999999999999999999987643
No 66
>PF12398 DUF3660: Receptor serine/threonine kinase ; InterPro: IPR022126 This domain family is found in eukaryotes, and is approximately 40 amino acids in length. The family is found in association with PF00954 from PFAM, PF01453 from PFAM, PF00069 from PFAM, PF08276 from PFAM. There is a conserved ELPL sequence motif. ; GO: 0004674 protein serine/threonine kinase activity
Probab=84.77 E-value=0.64 Score=32.99 Aligned_cols=30 Identities=27% Similarity=0.226 Sum_probs=24.0
Q ss_pred eeeccccccCCCceeEEecCCccccccCCC
Q 017885 33 YLRDHHANQRLPTTLLFRSSKRNYYHNNSN 62 (364)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (364)
||..+++||-||.-=++-||||++|+|+..
T Consensus 3 ~i~~~~RnQ~llmN~~v~sskr~~s~Enk~ 32 (42)
T PF12398_consen 3 PIVNRQRNQDLLMNGMVLSSKRQLSGENKT 32 (42)
T ss_pred ccccccccccccccceEEeccccccccCcc
Confidence 455667899998777788999999998754
No 67
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=84.24 E-value=3.2 Score=35.43 Aligned_cols=57 Identities=18% Similarity=0.171 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHHHHhhhcc
Q 017885 271 WSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFICLLLPFL 328 (364)
Q Consensus 271 ~~lL~ils~i~~Ais~V~eE~~fk~~~~~lk~~ld~~~v~~w~~~fq~l~~~lllP~~ 328 (364)
|.++.++|.+++|+.+|+.|+.+++.. ..+.+.|++.+..+.+...+++.++..++.
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~-~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~ 57 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVS-SNSKKLNPLNLLYYNSPISFIILLPLAFLL 57 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhccc-ccccCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346889999999999999999988521 112359999999999999887776654443
No 68
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=83.52 E-value=0.52 Score=45.59 Aligned_cols=74 Identities=16% Similarity=0.187 Sum_probs=63.0
Q ss_pred cceehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecC
Q 017885 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG 257 (364)
Q Consensus 184 ~~f~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~ 257 (364)
|.+..+|++.+++..+.+.--.+-.+-.-.+...+-=-||.+.|+++.+...+..||+|..+|+.|+.+...-|
T Consensus 242 ~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~G 315 (337)
T KOG1580|consen 242 WDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG 315 (337)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence 67888999999999999888776666555556666678999999999999999999999999999998877654
No 69
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=83.08 E-value=13 Score=35.59 Aligned_cols=60 Identities=18% Similarity=0.156 Sum_probs=53.0
Q ss_pred ehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhhe
Q 017885 187 VAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLV 246 (364)
Q Consensus 187 ~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~iv 246 (364)
.++=++-+.++++.-+-..|.+.-.=..-....+..|.++|+++.+.+++..-.+|+.+|
T Consensus 185 ~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 185 WIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred HHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 445568888999988888899988888999999999999999999999999999998765
No 70
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=80.71 E-value=3.1 Score=41.08 Aligned_cols=70 Identities=19% Similarity=0.046 Sum_probs=53.7
Q ss_pred eehhhHHHHHHHHHHHHHhhhccccHHHHhcchh-HHHHHHHHHHHhcCcccccccchhhheeeeeeEEee
Q 017885 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTF-LVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA 255 (364)
Q Consensus 186 f~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~-IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~ 255 (364)
.+..+.++...|-..++.+..-.-.+-.=|.=.+ +.+.+++..+|||+|+++.||+.+.+..+||.+...
T Consensus 74 ~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~ 144 (293)
T COG2962 74 MLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW 144 (293)
T ss_pred HHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 4556788888888888887754444444444444 456667789999999999999999999999988654
No 71
>PRK13499 rhamnose-proton symporter; Provisional
Probab=80.39 E-value=8.8 Score=38.86 Aligned_cols=100 Identities=19% Similarity=0.044 Sum_probs=75.8
Q ss_pred ehhhHHHHHHHHHHHHHhhhccccHH-HHhcchhHHHHHHHHHHHhcCc-------ccccccchhhheeeeeeEEeecCC
Q 017885 187 VAVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRR-------YRVNQLFGCFLVGIGVIITVASGS 258 (364)
Q Consensus 187 ~i~GllD~~a~~L~~ia~~yts~s~~-~mL~qs~IpfT~llS~iFLkrR-------y~~~q~lGv~ivliGvivv~~s~s 258 (364)
++-|++=.+++.+.+.+..|...|.. .+-.+...+.+.++-.+++++= -...-++|++++++|+++....+.
T Consensus 77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~ 156 (345)
T PRK13499 77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ 156 (345)
T ss_pred HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 33488999999999999999999987 4556777888999988887731 123457899999999999888432
Q ss_pred CCCC------CCCCcchHHHHHHHHHHHHHHHHH
Q 017885 259 NPGH------SLKGAGIFWSLLMIVSFLLQAADT 286 (364)
Q Consensus 259 ~~~~------s~~~~~ll~~lL~ils~i~~Ais~ 286 (364)
..++ .++.+.-.+.++.++|.+.+++=+
T Consensus 157 ~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~ 190 (345)
T PRK13499 157 LKERKMGIKKAEEFNLKKGLILAVMSGIFSACFS 190 (345)
T ss_pred hcccccccccccccchHhHHHHHHHHHHHHHHHH
Confidence 1111 233566788999999999999888
No 72
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=78.41 E-value=7 Score=34.18 Aligned_cols=121 Identities=20% Similarity=0.242 Sum_probs=67.0
Q ss_pred HHHHhhhhHHHHHHHHhCCCCChHHHHHHHH-HhHHHHHHHHHHHHHHhcCCcchhhhcCCCcceehhhHHHHHHHHHHH
Q 017885 123 VTVLLGVGNRVLYKLALVPLKHYPFFLAQLA-TFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGM 201 (364)
Q Consensus 123 ~lvi~G~~N~V~~Kl~~~~~~~yp~fl~q~~-t~~yi~v~f~il~~r~~~~~i~~e~~~~p~~~f~i~GllD~~a~~L~~ 201 (364)
++.+-+..|.-+.|...+ |+.-+.+. ..+++.......+.+. . . .++..+.|+|.++ -|++-+..-+...
T Consensus 12 ~i~~q~~~N~~L~~~~gs-----~~~as~i~~~~G~i~~~i~~~~~~~-~-~-~~~~~~~p~w~~l-GG~lG~~~V~~~~ 82 (138)
T PF04657_consen 12 LIALQAAFNGQLGKALGS-----PLVASFISFGVGFILLLIILLITGR-P-S-LASLSSVPWWAYL-GGLLGVFFVLSNI 82 (138)
T ss_pred HHHHHHHHHHHHHHHhCc-----cHHHHHHHHHHHHHHHHHHHHHhcc-c-c-cchhccCChHHhc-cHHHHHHHHHHHH
Confidence 344445667666666543 23333222 2333333222222221 1 1 2234456667665 7788877777777
Q ss_pred HHhhhccccHHHHhcc-hhHHHHHHHHHH----HhcCcccccccchhhheeeeeeE
Q 017885 202 AAGAILSGASIPILSQ-TFLVWQILLSII----FLGRRYRVNQLFGCFLVGIGVII 252 (364)
Q Consensus 202 ia~~yts~s~~~mL~q-s~IpfT~llS~i----FLkrRy~~~q~lGv~ivliGviv 252 (364)
...+.+..+....+.= .-+..++++-.+ .-|++.+..+++|+.+.++|+++
T Consensus 83 ~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 83 ILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 7777666665543321 223344444432 24588999999999999999753
No 73
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=75.93 E-value=4.4 Score=34.37 Aligned_cols=49 Identities=20% Similarity=0.238 Sum_probs=43.6
Q ss_pred cccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeec
Q 017885 208 SGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (364)
Q Consensus 208 s~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s 256 (364)
.+=++.-=.+..|..++++.+.+=|+|+.++.++|..+|++|+.+....
T Consensus 56 fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 56 FGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred chhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 3446778889999999999999999999999999999999999887654
No 74
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=74.06 E-value=19 Score=36.01 Aligned_cols=67 Identities=16% Similarity=0.176 Sum_probs=52.2
Q ss_pred eehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeE
Q 017885 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (364)
Q Consensus 186 f~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGviv 252 (364)
.++.+.|.++++.+.+.-...-.+-...+...+==.+++++|.+..+.+.+..||+|+++|+.|+..
T Consensus 244 i~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 244 ILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred HHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 5777899999998888776644444444444444567899999999999999999999999987754
No 75
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=73.36 E-value=29 Score=35.79 Aligned_cols=82 Identities=15% Similarity=0.210 Sum_probs=66.6
Q ss_pred hhhcCCC-cce---ehhhHH-HHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeee
Q 017885 177 EMLSMPK-APF---VAVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVI 251 (364)
Q Consensus 177 e~~~~p~-~~f---~i~Gll-D~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvi 251 (364)
|..++|. .++ ++.++. ..++.++=..|...|++-+..+=....||..|+.=.++-++.|+...++|...+++|.+
T Consensus 307 e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv 386 (416)
T KOG2765|consen 307 ERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFV 386 (416)
T ss_pred CcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHh
Confidence 4555665 233 334555 45677888888889999999888899999999999999999999999999999999999
Q ss_pred EEeecCC
Q 017885 252 ITVASGS 258 (364)
Q Consensus 252 vv~~s~s 258 (364)
++-.++.
T Consensus 387 ~vn~~~~ 393 (416)
T KOG2765|consen 387 IVNISSE 393 (416)
T ss_pred heecccc
Confidence 9888753
No 76
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=72.52 E-value=36 Score=28.94 Aligned_cols=48 Identities=13% Similarity=0.153 Sum_probs=42.5
Q ss_pred ccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeec
Q 017885 209 GASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (364)
Q Consensus 209 ~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s 256 (364)
+-.+.--.+..|..++++-+..=|+|+.++.|+|..+|++|+.+....
T Consensus 58 GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 58 GRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred hhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 446677788899999999999999999999999999999999887764
No 77
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=69.25 E-value=22 Score=32.86 Aligned_cols=55 Identities=11% Similarity=0.212 Sum_probs=34.2
Q ss_pred CcceehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHH---HHHhcCcccc
Q 017885 183 KAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLS---IIFLGRRYRV 237 (364)
Q Consensus 183 ~~~f~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS---~iFLkrRy~~ 237 (364)
.|+.++++++=++.=+..+.....+|+.....|...+...-.+++ ..++||||+.
T Consensus 146 ~~k~~~~~~~~~~~w~~~~~~~~~lp~~inp~l~~~~~iiig~i~~~~~~~lkkk~~i 203 (206)
T PF06570_consen 146 WWKYILISVLAMVLWIVIFVLTSFLPPVINPVLPPWVYIIIGVIAFALRFYLKKKYNI 203 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccccCCcCCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 366666666656655666666667777777767665544443333 4568888774
No 78
>PF15169 DUF4564: Domain of unknown function (DUF4564)
Probab=69.09 E-value=5.2 Score=37.13 Aligned_cols=55 Identities=22% Similarity=0.350 Sum_probs=42.9
Q ss_pred hcCccccccc-chhhheeeeeeEEeecCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHH--HHHHH
Q 017885 231 LGRRYRVNQL-FGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLK--EVIFL 294 (364)
Q Consensus 231 LkrRy~~~q~-lGv~ivliGvivv~~s~s~~~~s~~~~~ll~~lL~ils~i~~Ais~V~e--E~~fk 294 (364)
|++.+..+.| +++.|+.+|+...-.++ .+++|=++++++|++.|+||+=+ |.+|.
T Consensus 15 Lkrsp~~rsWsl~~gi~siGl~~~yys~---------d~~~wK~fyv~~c~fva~~n~edwee~iFd 72 (187)
T PF15169_consen 15 LKRSPGIRSWSLLVGIASIGLAAAYYSS---------DSLLWKLFYVAGCLFVALQNMEDWEEAIFD 72 (187)
T ss_pred EEcCCCccchhhHHHHHhcccceeeecC---------CchHHHHHHHHHHHHHHHhcchhhhheeEe
Confidence 5677887777 46677778888777663 35899999999999999999964 55555
No 79
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=65.90 E-value=4.9 Score=39.29 Aligned_cols=57 Identities=21% Similarity=0.117 Sum_probs=50.6
Q ss_pred HHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeee
Q 017885 195 LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVI 251 (364)
Q Consensus 195 ~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvi 251 (364)
+=..+-++++.+.|...+..|...-..+..+.-++||+++++..||+|...++.+..
T Consensus 222 lPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 222 LPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred cchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 334577899999999999999999999999999999999999999999998886544
No 80
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=61.02 E-value=6 Score=33.79 Aligned_cols=71 Identities=13% Similarity=0.089 Sum_probs=56.6
Q ss_pred cceehhhHHHHHHHHHHHHHhhhccccHH-HHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEe
Q 017885 184 APFVAVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (364)
Q Consensus 184 ~~f~i~GllD~~a~~L~~ia~~yts~s~~-~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~ 254 (364)
|.|.+|=+++-++..+-+.-+++++.++. .+-+...+.||++.-...=.+-....-++|..+++.|+.+.+
T Consensus 53 w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 53 WEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 66888889999999999999999999987 466666888888887765445566777888888888876653
No 81
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=58.91 E-value=16 Score=36.39 Aligned_cols=118 Identities=14% Similarity=0.107 Sum_probs=79.7
Q ss_pred hhhHHHHHHHHhCCCCChHHHHHHHHHhHHHHHHHHHHHHHHhcCCcchhhhcC---CCcceehhhHHHHHHHHHHHHHh
Q 017885 128 GVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSM---PKAPFVAVGLLEALAAATGMAAG 204 (364)
Q Consensus 128 G~~N~V~~Kl~~~~~~~yp~fl~q~~t~~yi~v~f~il~~r~~~~~i~~e~~~~---p~~~f~i~GllD~~a~~L~~ia~ 204 (364)
-.+|.|..|....+..+--|-++..+++-.+.+|.+.+.....-+ +...+ |-++|.++=.+..+.++.+.+.-
T Consensus 197 vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~----~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvT 272 (347)
T KOG1442|consen 197 VALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQ----AVVGFPHLPAIKFWILMTLSGLFGFAMGYVT 272 (347)
T ss_pred HHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHH----HHcCcccchHHHHHHHHHHHHHHHHHhhhee
Confidence 357999999888888999999999888888878877665543222 12233 33567666555555555544432
Q ss_pred h----hccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeee
Q 017885 205 A----ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIG 249 (364)
Q Consensus 205 ~----yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliG 249 (364)
. .|++-...+-..+=-.-+-+++..++++--+...|.|.+++++|
T Consensus 273 g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvg 321 (347)
T KOG1442|consen 273 GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVG 321 (347)
T ss_pred eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEeh
Confidence 2 44444444444445677888999999988888888888777655
No 82
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=57.59 E-value=82 Score=32.42 Aligned_cols=28 Identities=25% Similarity=0.085 Sum_probs=18.4
Q ss_pred HHHHhcCccccc---ccchhhheeeeeeEEe
Q 017885 227 SIIFLGRRYRVN---QLFGCFLVGIGVIITV 254 (364)
Q Consensus 227 S~iFLkrRy~~~---q~lGv~ivliGvivv~ 254 (364)
-|.+|.+|+... -+.+++...+|+++..
T Consensus 233 Vw~Llqprdyl~~~~L~~~~~~~~igli~~~ 263 (376)
T PF02554_consen 233 VWKLLQPRDYLNGFLLIGMLIGLVIGLIIGG 263 (376)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHheeecC
Confidence 356788887654 4556666677777744
No 83
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=55.81 E-value=58 Score=30.63 Aligned_cols=62 Identities=18% Similarity=0.161 Sum_probs=45.1
Q ss_pred hhcCCCcceehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHH--HHH-HHHhcCcccccc
Q 017885 178 MLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQI--LLS-IIFLGRRYRVNQ 239 (364)
Q Consensus 178 ~~~~p~~~f~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~--llS-~iFLkrRy~~~q 239 (364)
.++-+.||+++...+.++-=.+++++...+|.|+..-|.-....... +++ -+.||||++...
T Consensus 156 sqr~~~~K~~lv~~~sm~lWi~v~i~t~~lPtslN~~L~pi~l~IiGav~lalRfylkkk~NIqs 220 (226)
T COG4858 156 SQRPGTWKYLLVAVLSMLLWIAVMIATVFLPTSLNPQLPPIALTIIGAVILALRFYLKKKKNIQS 220 (226)
T ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHhhCCCcCCcCCchHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 34455689999999999999999999999999998877765433322 222 345788887543
No 84
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=54.86 E-value=12 Score=36.97 Aligned_cols=65 Identities=17% Similarity=0.261 Sum_probs=57.9
Q ss_pred cceehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheee
Q 017885 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGI 248 (364)
Q Consensus 184 ~~f~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivli 248 (364)
|.|..+|+.-..++++...|++.--+.=..++..+-++|..++=.+|.+.-++.+-|+|+++++.
T Consensus 254 ~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvs 318 (346)
T KOG4510|consen 254 WLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVS 318 (346)
T ss_pred EEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeeh
Confidence 45778899999999999999997766667788999999999999999999999999999977763
No 85
>PRK13499 rhamnose-proton symporter; Provisional
Probab=54.63 E-value=89 Score=31.75 Aligned_cols=67 Identities=13% Similarity=0.059 Sum_probs=46.6
Q ss_pred ehhhHHHHHHHHHHHHHhhhc----cccHHHHhcchhHHHHHHHHHHHhcCccc------ccccchhhheeeeeeEEe
Q 017885 187 VAVGLLEALAAATGMAAGAIL----SGASIPILSQTFLVWQILLSIIFLGRRYR------VNQLFGCFLVGIGVIITV 254 (364)
Q Consensus 187 ~i~GllD~~a~~L~~ia~~yt----s~s~~~mL~qs~IpfT~llS~iFLkrRy~------~~q~lGv~ivliGvivv~ 254 (364)
++.|++-..++++..++.... +.+++.+.+|+.+.++.+... +||++=+ +.-++|++++++|.++++
T Consensus 264 ~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig 340 (345)
T PRK13499 264 ALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVG 340 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHh
Confidence 666888889998888888755 334677888999999999999 4886422 333455555555554443
No 86
>PRK02237 hypothetical protein; Provisional
Probab=53.24 E-value=7.4 Score=33.16 Aligned_cols=47 Identities=13% Similarity=0.179 Sum_probs=41.9
Q ss_pred ccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEee
Q 017885 209 GASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA 255 (364)
Q Consensus 209 ~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~ 255 (364)
+=++.-=.+..|..++++-+..=|.|++++.++|+.+|++|+.+...
T Consensus 59 GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 59 GRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 45677788899999999999999999999999999999999977654
No 87
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=51.24 E-value=57 Score=32.45 Aligned_cols=66 Identities=20% Similarity=0.268 Sum_probs=51.1
Q ss_pred ehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeE
Q 017885 187 VAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (364)
Q Consensus 187 ~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGviv 252 (364)
..-|...++.-.+...|+.++|-+...+|+=.-+....++++++.++.++.-|+++-..+-+|+++
T Consensus 215 v~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l 280 (293)
T COG2962 215 VLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALAL 280 (293)
T ss_pred HHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence 344777777777777777799999999999999999999999999998776666665444444433
No 88
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=50.06 E-value=8 Score=38.70 Aligned_cols=62 Identities=15% Similarity=0.188 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeE
Q 017885 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (364)
Q Consensus 191 llD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGviv 252 (364)
+|-.+-|...+....+|++-..++++..==.+.++.|+++++++.+..+.+|.++.++|+.+
T Consensus 243 v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~ 304 (316)
T KOG1441|consen 243 VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFL 304 (316)
T ss_pred HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHH
Confidence 34444455556666688998889888776666667788888888888888888888888764
No 89
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=45.30 E-value=96 Score=31.58 Aligned_cols=68 Identities=15% Similarity=0.123 Sum_probs=57.4
Q ss_pred ehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEe
Q 017885 187 VAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (364)
Q Consensus 187 ~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~ 254 (364)
.++=+..+.++.++-+-..|.+.-+=..-....|+++.+.|+.+.+.+++..=.+|+.+|++.+.+-.
T Consensus 254 w~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~ 321 (345)
T KOG2234|consen 254 WLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYS 321 (345)
T ss_pred HHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhh
Confidence 34456788888888777778888777777778999999999888899999999999999998887766
No 90
>PF04973 NMN_transporter: Nicotinamide mononucleotide transporter; InterPro: IPR006419 The PnuC protein of Escherichia coli is membrane protein responsible for nicotinamide mononucleotide transport, subject to regulation by interaction with the NadR (also called NadI) protein (see IPR006417 from INTERPRO). The extreme N- and C-terminal regions are poorly conserved. ; GO: 0006810 transport, 0016020 membrane
Probab=42.15 E-value=1.5e+02 Score=26.73 Aligned_cols=30 Identities=17% Similarity=0.228 Sum_probs=19.6
Q ss_pred hhhccccHHHHhcchhHHHHHHHHHHHhcC
Q 017885 204 GAILSGASIPILSQTFLVWQILLSIIFLGR 233 (364)
Q Consensus 204 ~~yts~s~~~mL~qs~IpfT~llS~iFLkr 233 (364)
......+-.+.++..+...+.+-.++.-||
T Consensus 104 ~~~~~~~~~~~~Da~~~~~siva~~l~~~k 133 (181)
T PF04973_consen 104 LKFLTDSPFPWLDALTTVLSIVAQWLMARK 133 (181)
T ss_pred HHHhcCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 334445556888888887777766666554
No 91
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=41.90 E-value=80 Score=32.71 Aligned_cols=64 Identities=19% Similarity=0.245 Sum_probs=48.5
Q ss_pred HHHHHhcCcccccccchhhheeeeeeEEeecCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 017885 226 LSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKG 302 (364)
Q Consensus 226 lS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~~~~s~~~~~ll~~lL~ils~i~~Ais~V~eE~~fk~~~~~lk~ 302 (364)
.-+++-|-.|..+-++++++-.+|++++..+++ + .+.+++.++.+++.=.-|..|-.++.++++
T Consensus 79 aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~-----------v--~~~l~Gv~las~ssg~GE~tfL~lt~~y~~ 142 (402)
T PF02487_consen 79 APFFIHRVPYWIRILICVALSAAGMLLVAFSPS-----------V--WVRLLGVVLASLSSGLGEVTFLSLTHFYGK 142 (402)
T ss_pred hHhhhhhccchHHHHHHHHHHHHHHhheeeccc-----------h--hHHHHHHHHHhhhhhhhHHHHHHHHHhcCc
Confidence 334344567888889999999999999887632 1 256788889999999999999987666553
No 92
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=38.58 E-value=84 Score=30.60 Aligned_cols=71 Identities=13% Similarity=0.206 Sum_probs=57.6
Q ss_pred eehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeec
Q 017885 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (364)
Q Consensus 186 f~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s 256 (364)
.++++++=++--+-.-.+++|++.+++.+.....|+..+..-..|.|.|.+..+....++.++.-++.-.+
T Consensus 71 WfpiSfLLv~MIyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~ 141 (309)
T COG5070 71 WFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWG 141 (309)
T ss_pred hcCHHHHHHHHHHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccc
Confidence 45667766666666667788999999999999999999999999999999999998887776655544433
No 93
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=31.91 E-value=56 Score=32.62 Aligned_cols=72 Identities=21% Similarity=0.278 Sum_probs=50.4
Q ss_pred hhhHHHHHHHHHHHH---Hhhhcc-ccHHHHhcchhHHHHHHHHHHHhcCcccccccchhhheeeeeeEEeecCCC
Q 017885 188 AVGLLEALAAATGMA---AGAILS-GASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSN 259 (364)
Q Consensus 188 i~GllD~~a~~L~~i---a~~yts-~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~s~s~ 259 (364)
=.+++.++++++... ++.-.. +....+...+-=-.|+++|+++.-|.++..+.-|-++|++|+.+-..|..+
T Consensus 261 Gy~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~n 336 (367)
T KOG1582|consen 261 GYAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRN 336 (367)
T ss_pred HHHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCC
Confidence 345566666665432 222222 223344444445679999999999999999999999999999999998744
No 94
>COG1966 CstA Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms]
Probab=30.74 E-value=3.6e+02 Score=29.38 Aligned_cols=57 Identities=18% Similarity=0.176 Sum_probs=32.2
Q ss_pred cccccCCcceeeeccccccccchhHHHHHHHHHHHhhhhHHHHHHHHhCCCCChHHHHH
Q 017885 92 VDKRKSGERTVEFNVISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLA 150 (364)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~v~il~v~lvi~G~~N~V~~Kl~~~~~~~yp~fl~ 150 (364)
.+.|++++.+.+. .++|.-+..+.++.+..++++=..+.++.-...+-+.+.||-..
T Consensus 107 ~SvR~~G~Si~~i--a~~~lG~~a~~~~~~~~l~iliiv~Avfa~vv~~~l~~~p~~~f 163 (575)
T COG1966 107 LSVRHGGKSIGEI--AGKYLGRTAKVFFLLLALILLILVGAVFAAVIAKLLANSPWGVF 163 (575)
T ss_pred eeeccCCccHHHH--HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCChhHH
Confidence 3446666655555 44555555666665555555555566666555555666666544
No 95
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=28.33 E-value=2.6e+02 Score=29.37 Aligned_cols=31 Identities=19% Similarity=0.393 Sum_probs=26.3
Q ss_pred ccHHHHhcchhHHHHHHHHHHHhcCcccccc
Q 017885 209 GASIPILSQTFLVWQILLSIIFLGRRYRVNQ 239 (364)
Q Consensus 209 ~s~~~mL~qs~IpfT~llS~iFLkrRy~~~q 239 (364)
..-+.+|-|++..|.++....++-||..+.+
T Consensus 400 ~EdyALL~GSl~LF~iLa~vM~~TRkiDWy~ 430 (430)
T PF06123_consen 400 SEDYALLMGSLLLFIILALVMYLTRKIDWYA 430 (430)
T ss_pred hhhHHHHHHHHHHHHHHHHHHheeecccccC
Confidence 3446799999999999999999999988754
No 96
>PF15100 TMEM187: TMEM187 protein family
Probab=26.92 E-value=2.2e+02 Score=27.54 Aligned_cols=111 Identities=14% Similarity=0.128 Sum_probs=60.9
Q ss_pred HHHHHHHhhhhHHHHHHHHhCCCCCh-----HHHH----HHHHHhHHHHHHHHHHHHHHhc-CCcchhhhcCCCcceehh
Q 017885 120 AAAVTVLLGVGNRVLYKLALVPLKHY-----PFFL----AQLATFGYVAVYFSILYLRYHA-GIVTDEMLSMPKAPFVAV 189 (364)
Q Consensus 120 l~v~lvi~G~~N~V~~Kl~~~~~~~y-----p~fl----~q~~t~~yi~v~f~il~~r~~~-~~i~~e~~~~p~~~f~i~ 189 (364)
+.+.++.+|..+.++...-.++..|+ |-|+ |.+.+++|+.+-+ +.+.+..+ +.-+++.+ .-|.-|+.|
T Consensus 11 lc~~~~~~GiFd~v~v~~GyehYaE~p~~~LP~~LaMPfNslvNv~Y~llG~-yWL~~~~~~~~~~~~a~-Y~k~vfa~m 88 (242)
T PF15100_consen 11 LCVATVYTGIFDGVFVEVGYEHYAEAPVASLPAFLAMPFNSLVNVAYVLLGW-YWLRRAGKAPGTPARAR-YLKDVFAWM 88 (242)
T ss_pred HHHHHHHhhcccchhhhcchhhhccCccccchHHhhccHHHHHHHHHHHHHH-HHHhhccCCCCCchHHH-HHHHHHHHH
Confidence 46677888999999887776665443 4444 3456677765441 11222111 11111111 112336677
Q ss_pred hHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhc
Q 017885 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLG 232 (364)
Q Consensus 190 GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLk 232 (364)
++.-.--+.+-...+.+-.+.+.|.+.=-+.-|.+.+|-...|
T Consensus 89 Al~YgpVQwlri~Tq~r~~AvLDQW~tLPifAW~v~Wc~~l~~ 131 (242)
T PF15100_consen 89 ALHYGPVQWLRIATQTRRAAVLDQWFTLPIFAWVVAWCLYLDR 131 (242)
T ss_pred HHHHhHHHHHHHHHhhccHHHHHHHHhhHHHHHHHHHHHHHHc
Confidence 7655555555555555666666666665566667777665544
No 97
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=25.84 E-value=58 Score=24.29 Aligned_cols=46 Identities=17% Similarity=0.274 Sum_probs=33.5
Q ss_pred cccchhhheeeeeeEEeecCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017885 238 NQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLD 295 (364)
Q Consensus 238 ~q~lGv~ivliGvivv~~s~s~~~~s~~~~~ll~~lL~ils~i~~Ais~V~eE~~fk~ 295 (364)
...+|..++++|+++...|+. +.++++++-..-|-.+...++.++.
T Consensus 4 v~v~G~~lv~~Gii~~~lPGp------------G~l~i~~GL~iLa~ef~wArr~l~~ 49 (53)
T PF09656_consen 4 VGVLGWVLVVAGIIMLPLPGP------------GLLVIFLGLAILATEFPWARRLLRR 49 (53)
T ss_pred hhhHHHHHHHHHHHhhcCCCC------------cHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 357899999999999999863 2345566667777777777776553
No 98
>PRK11715 inner membrane protein; Provisional
Probab=25.43 E-value=3e+02 Score=28.90 Aligned_cols=30 Identities=23% Similarity=0.452 Sum_probs=25.9
Q ss_pred ccHHHHhcchhHHHHHHHHHHHhcCccccc
Q 017885 209 GASIPILSQTFLVWQILLSIIFLGRRYRVN 238 (364)
Q Consensus 209 ~s~~~mL~qs~IpfT~llS~iFLkrRy~~~ 238 (364)
..=+.+|.|+...|.++....++-||..+.
T Consensus 406 ~EDyALL~GSllLF~~La~vM~~TR~iDWy 435 (436)
T PRK11715 406 SEDYALLLGSLLLFAVLALVMFLTRRIDWY 435 (436)
T ss_pred HhHHHHHHHHHHHHHHHHHHHheeeccccc
Confidence 445689999999999999999999998765
No 99
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=25.25 E-value=14 Score=36.63 Aligned_cols=34 Identities=24% Similarity=0.414 Sum_probs=30.2
Q ss_pred HHHHHHHHHhcCcccccccchhhheeeeeeEEee
Q 017885 222 WQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA 255 (364)
Q Consensus 222 fT~llS~iFLkrRy~~~q~lGv~ivliGvivv~~ 255 (364)
+++++|.+..+-.++.+||+|+.+|++|-++-..
T Consensus 281 vSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 281 VSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred HHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 6889999999999999999999999999877443
No 100
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=24.69 E-value=5.4e+02 Score=23.82 Aligned_cols=45 Identities=16% Similarity=0.073 Sum_probs=39.7
Q ss_pred eehhhHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHH
Q 017885 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIF 230 (364)
Q Consensus 186 f~i~GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iF 230 (364)
.+.+|++-..+..+.+.|..+.+++...++.-..++++++++.+.
T Consensus 211 l~~~g~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 211 LVLAGLITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 456788888889999999999999999999999999999998753
No 101
>PF05072 Herpes_UL43: Herpesvirus UL43 protein; InterPro: IPR007764 UL43 genes are expressed with true-late (gamma2) kinetics and have been identified as a virion tegument component []. Studies suggest that the N-terminal sequences target UL43 to protein aggregates and that C-terminal sequences are important for incorporation into particles.; GO: 0016020 membrane, 0019033 viral tegument
Probab=24.18 E-value=6.4e+02 Score=26.00 Aligned_cols=42 Identities=31% Similarity=0.251 Sum_probs=23.5
Q ss_pred hHHHHHHHHHHHHHhhhccccHHHHhcchhHHHHHHHHHHHhcCccc
Q 017885 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYR 236 (364)
Q Consensus 190 GllD~~a~~L~~ia~~yts~s~~~mL~qs~IpfT~llS~iFLkrRy~ 236 (364)
..+-+.+..|+.++.. .-..+.-+.-.+.-+...+-||||-+
T Consensus 307 ~~~~~~~~~L~~~g~~-----~g~~~~La~av~~~l~~~l~lrrr~~ 348 (373)
T PF05072_consen 307 IILQALAIALALFGYE-----IGAPLFLASAVWISLACVLGLRRRNR 348 (373)
T ss_pred HHHHHHHHHHHHhccc-----hHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4455566666666543 22223334455666667777887755
No 102
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=23.50 E-value=38 Score=28.86 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhcCcccccccchhhheeeeeeE
Q 017885 220 LVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (364)
Q Consensus 220 IpfT~llS~iFLkrRy~~~q~lGv~ivliGviv 252 (364)
+..-+++|.+++|+++++.|+.|-++.+.++..
T Consensus 73 L~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 73 LVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred hheeHHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 444457788999999999999998887766654
No 103
>COG2456 Uncharacterized conserved protein [Function unknown]
Probab=22.07 E-value=52 Score=28.19 Aligned_cols=46 Identities=26% Similarity=0.549 Sum_probs=32.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHHHHH
Q 017885 269 IFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQALFI 321 (364)
Q Consensus 269 ll~~lL~ils~i~~Ais~V~eE~~fk~~~~~lk~~ld~~~v~~w~~~fq~l~~ 321 (364)
.+|..+.+.+-.|- +|.=.+|.+ -++..+|.+.+-+-+..|-+++=
T Consensus 45 ~~wv~vlifal~P~-fs~~Ia~il------GlGRGlDaL~vitI~~ayyLlfr 90 (121)
T COG2456 45 AFWVFVLIFALFPE-FSGEIAEIL------GLGRGLDALFVITIGLAYYLLFR 90 (121)
T ss_pred HHHHHHHHHHhcch-HHHHHHHHh------ccccccchhhHHHHHHHHHHHHH
Confidence 34667778888777 777777762 23456999999888888865543
No 104
>PF05915 DUF872: Eukaryotic protein of unknown function (DUF872); InterPro: IPR008590 This entry represents several uncharacterised eukaryotic transmembrane proteins. The function of this currently unknown.
Probab=20.51 E-value=4.1e+02 Score=22.70 Aligned_cols=27 Identities=11% Similarity=0.046 Sum_probs=20.9
Q ss_pred cchhHHHHHHHHHHHhhhhHHHHHHHH
Q 017885 112 DRRVEIVIAAAVTVLLGVGNRVLYKLA 138 (364)
Q Consensus 112 ~~~~~v~il~v~lvi~G~~N~V~~Kl~ 138 (364)
+..+|.+.++++++++|+.=.++.=+.
T Consensus 38 k~pwK~I~la~~Lli~G~~li~~g~l~ 64 (115)
T PF05915_consen 38 KIPWKSIALAVFLLIFGTVLIIIGLLL 64 (115)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 557999999999999998766665444
Done!