Query 017888
Match_columns 364
No_of_seqs 188 out of 1539
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 06:32:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017888.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017888hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2w1v_A Nitrilase-2, nitrilase 100.0 2.9E-56 9.8E-61 418.0 28.5 272 81-357 2-273 (276)
2 3p8k_A Hydrolase, carbon-nitro 100.0 1.6E-55 5.6E-60 414.1 28.9 263 78-354 16-281 (281)
3 1f89_A 32.5 kDa protein YLR351 100.0 1.6E-55 5.5E-60 415.8 27.1 275 80-357 8-289 (291)
4 3hkx_A Amidase; alpha-beta-BET 100.0 2.3E-54 7.9E-59 406.7 20.9 263 78-356 16-282 (283)
5 3ivz_A Nitrilase; alpha-beta s 100.0 4.9E-53 1.7E-57 393.2 25.4 255 83-354 2-261 (262)
6 2e11_A Hydrolase; dimethylarse 100.0 1.1E-52 3.6E-57 391.6 24.8 257 81-354 2-265 (266)
7 1ems_A Nitfhit, NIT-fragIle hi 100.0 2.8E-52 9.7E-57 415.5 22.3 276 79-359 11-291 (440)
8 2vhh_A CG3027-PA; hydrolase; 2 100.0 7.9E-51 2.7E-55 400.2 26.6 271 78-358 68-371 (405)
9 1uf5_A N-carbamyl-D-amino acid 100.0 4.3E-50 1.5E-54 380.6 27.8 272 82-357 3-301 (303)
10 2dyu_A Formamidase; AMIF, CEK, 100.0 8.4E-46 2.9E-50 356.1 29.4 249 81-347 12-275 (334)
11 2uxy_A Aliphatic amidase; nitr 100.0 5.2E-46 1.8E-50 358.5 27.6 248 80-345 10-273 (341)
12 3ilv_A Glutamine-dependent NAD 100.0 7.3E-45 2.5E-49 375.9 25.6 251 80-344 3-277 (634)
13 4f4h_A Glutamine dependent NAD 100.0 4.5E-44 1.6E-48 365.0 28.2 239 82-334 6-267 (565)
14 3n05_A NH(3)-dependent NAD(+) 100.0 2.3E-44 8E-49 370.0 25.3 242 81-336 3-264 (590)
15 3sdb_A Glutamine-dependent NAD 100.0 1.9E-43 6.4E-48 367.3 24.3 260 79-349 9-294 (680)
16 3hkx_A Amidase; alpha-beta-BET 80.2 6.7 0.00023 35.4 8.8 73 244-318 44-128 (283)
17 3p8k_A Hydrolase, carbon-nitro 79.5 5 0.00017 36.2 7.7 72 245-318 45-127 (281)
18 2vhh_A CG3027-PA; hydrolase; 2 78.8 6.9 0.00023 37.5 8.7 75 244-318 103-194 (405)
19 3ivz_A Nitrilase; alpha-beta s 76.4 6.3 0.00021 35.0 7.3 66 108-193 156-222 (262)
20 1f89_A 32.5 kDa protein YLR351 75.6 8.6 0.00029 34.6 8.1 73 245-318 35-125 (291)
21 2dyu_A Formamidase; AMIF, CEK, 73.0 14 0.00047 34.2 8.9 67 252-318 51-130 (334)
22 1ems_A Nitfhit, NIT-fragIle hi 72.5 14 0.00047 35.5 9.2 74 245-319 38-125 (440)
23 2uxy_A Aliphatic amidase; nitr 69.8 12 0.00043 34.6 7.9 70 107-193 175-245 (341)
24 2w1v_A Nitrilase-2, nitrilase 69.0 11 0.00037 33.7 7.0 72 245-318 27-109 (276)
25 3obe_A Sugar phosphate isomera 67.3 21 0.0007 32.3 8.7 75 82-167 89-169 (305)
26 1uf5_A N-carbamyl-D-amino acid 67.0 9.8 0.00034 34.3 6.4 75 244-318 29-123 (303)
27 3n05_A NH(3)-dependent NAD(+) 60.9 29 0.001 34.8 9.1 71 108-193 174-245 (590)
28 3ngf_A AP endonuclease, family 58.9 29 0.00098 30.4 7.8 63 95-167 87-150 (269)
29 1k77_A EC1530, hypothetical pr 58.8 31 0.0011 29.7 8.0 62 96-167 80-143 (260)
30 2e11_A Hydrolase; dimethylarse 57.4 24 0.00083 31.0 7.1 64 113-193 164-229 (266)
31 3cqj_A L-ribulose-5-phosphate 56.5 28 0.00097 30.8 7.5 63 97-167 104-166 (295)
32 4f4h_A Glutamine dependent NAD 56.1 29 0.00098 34.7 8.0 71 108-193 179-250 (565)
33 2q02_A Putative cytoplasmic pr 48.0 56 0.0019 28.2 7.9 73 82-167 64-139 (272)
34 3dx5_A Uncharacterized protein 44.5 34 0.0011 30.1 5.8 76 83-167 62-142 (286)
35 4fva_A 5'-tyrosyl-DNA phosphod 44.1 13 0.00046 31.6 3.0 40 82-124 11-54 (256)
36 3qc0_A Sugar isomerase; TIM ba 43.9 37 0.0013 29.4 6.0 65 96-167 78-142 (275)
37 1iuq_A Glycerol-3-phosphate ac 41.9 42 0.0014 31.6 6.1 65 95-166 204-272 (367)
38 3u0h_A Xylose isomerase domain 41.6 35 0.0012 29.7 5.5 76 83-167 61-141 (281)
39 1i60_A IOLI protein; beta barr 39.0 41 0.0014 29.2 5.4 76 82-167 59-142 (278)
40 3tva_A Xylose isomerase domain 37.3 73 0.0025 27.9 6.9 63 95-167 96-158 (290)
41 3l23_A Sugar phosphate isomera 36.8 81 0.0028 28.2 7.2 60 96-166 103-164 (303)
42 1vli_A Spore coat polysacchari 36.7 56 0.0019 31.0 6.1 70 98-167 41-120 (385)
43 3p94_A GDSL-like lipase; serin 36.6 1.4E+02 0.0046 24.1 8.2 77 83-165 75-159 (204)
44 3rjt_A Lipolytic protein G-D-S 36.4 68 0.0023 26.1 6.2 61 96-165 112-172 (216)
45 2j6v_A UV endonuclease, UVDE; 36.1 1.2E+02 0.0041 27.4 8.2 65 97-167 57-122 (301)
46 3cny_A Inositol catabolism pro 36.1 97 0.0033 27.1 7.6 65 96-166 85-159 (301)
47 3kws_A Putative sugar isomeras 34.0 1.1E+02 0.0038 26.7 7.6 79 82-167 77-165 (287)
48 2hk0_A D-psicose 3-epimerase; 31.8 1.3E+02 0.0043 26.7 7.6 66 96-167 102-170 (309)
49 1nmo_A Hypothetical protein YB 30.8 1.1E+02 0.0039 26.7 6.9 57 233-290 37-96 (247)
50 2o3h_A DNA-(apurinic or apyrim 30.5 1E+02 0.0036 26.6 6.7 39 82-126 28-67 (285)
51 3ayv_A Putative uncharacterize 29.8 72 0.0025 27.3 5.4 65 96-167 71-136 (254)
52 1tz9_A Mannonate dehydratase; 29.2 2.8E+02 0.0096 25.3 9.8 38 83-120 69-114 (367)
53 1k7c_A Rhamnogalacturonan acet 28.2 1.5E+02 0.005 25.2 7.1 60 94-165 108-167 (233)
54 2yyb_A Hypothetical protein TT 27.6 1.3E+02 0.0043 26.3 6.6 57 233-290 38-96 (242)
55 1wdu_A TRAS1 ORF2P; four-layer 27.6 45 0.0015 28.5 3.6 37 85-125 20-56 (245)
56 3ilv_A Glutamine-dependent NAD 27.2 88 0.003 31.6 6.2 71 108-193 176-247 (634)
57 3tn4_A Phosphotriesterase; lac 26.9 1.2E+02 0.0042 28.2 6.7 54 95-168 77-130 (360)
58 2qw5_A Xylose isomerase-like T 26.9 1.9E+02 0.0066 25.8 8.1 69 96-167 104-183 (335)
59 3g12_A Putative lactoylglutath 26.3 1.2E+02 0.0041 22.8 5.7 43 150-196 77-120 (128)
60 3ey7_A Biphenyl-2,3-DIOL 1,2-d 25.0 1.5E+02 0.0052 21.6 6.0 45 150-194 84-128 (133)
61 3vni_A Xylose isomerase domain 24.8 1.1E+02 0.0036 26.8 5.7 63 97-167 84-151 (294)
62 2him_A L-asparaginase 1; hydro 23.9 2.6E+02 0.0088 26.0 8.3 67 229-295 229-295 (358)
63 3lmz_A Putative sugar isomeras 23.7 3.1E+02 0.011 23.2 8.5 72 74-167 9-80 (257)
64 1o7j_A L-asparaginase; atomic 23.6 2.6E+02 0.0089 25.5 8.2 64 229-294 217-280 (327)
65 2wlt_A L-asparaginase; hydrola 23.3 2.7E+02 0.0094 25.4 8.3 64 229-294 218-281 (332)
66 1wsa_A Asparaginase, asparagin 23.3 2.8E+02 0.0095 25.4 8.4 64 229-294 215-278 (330)
67 4f1h_A Tyrosyl-DNA phosphodies 23.1 35 0.0012 28.3 2.0 39 82-123 3-43 (250)
68 4eo3_A Bacterioferritin comigr 23.1 83 0.0028 28.7 4.7 24 176-199 100-123 (322)
69 2qul_A D-tagatose 3-epimerase; 23.0 82 0.0028 27.4 4.6 66 96-167 83-152 (290)
70 1xla_A D-xylose isomerase; iso 22.7 2.1E+02 0.0072 26.5 7.6 64 97-167 112-180 (394)
71 1nns_A L-asparaginase II; amid 22.2 3E+02 0.01 25.1 8.3 64 229-294 211-274 (326)
72 1g6h_A High-affinity branched- 21.6 2.9E+02 0.0098 23.9 7.9 71 106-192 163-233 (257)
73 4gew_A 5'-tyrosyl-DNA phosphod 21.5 54 0.0018 30.4 3.1 37 82-123 119-159 (362)
74 3bdk_A D-mannonate dehydratase 21.5 3E+02 0.01 25.8 8.3 42 82-123 77-126 (386)
75 2fyw_A Conserved hypothetical 21.4 2.4E+02 0.0082 24.8 7.3 57 233-290 40-100 (267)
76 3p6l_A Sugar phosphate isomera 21.1 1.3E+02 0.0043 25.8 5.3 58 83-167 77-134 (262)
77 3gfo_A Cobalt import ATP-bindi 20.9 2.6E+02 0.009 24.7 7.5 72 107-193 154-225 (275)
78 3qxb_A Putative xylose isomera 20.6 79 0.0027 28.2 3.9 66 97-166 110-177 (316)
79 2zds_A Putative DNA-binding pr 20.6 1.4E+02 0.0046 26.7 5.6 68 97-167 107-179 (340)
80 1ivn_A Thioesterase I; hydrola 20.5 2.3E+02 0.008 22.5 6.7 69 84-165 64-137 (190)
81 3huh_A Virulence protein STM31 20.4 1.8E+02 0.0063 22.1 5.8 46 150-195 97-142 (152)
82 2gx8_A NIF3-related protein; s 20.2 2E+02 0.007 27.2 6.8 57 233-290 66-126 (397)
83 3nxk_A Cytoplasmic L-asparagin 20.1 2.5E+02 0.0086 25.8 7.3 64 229-294 220-284 (334)
No 1
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=100.00 E-value=2.9e-56 Score=417.98 Aligned_cols=272 Identities=55% Similarity=0.949 Sum_probs=247.9
Q ss_pred CceEEEEEecccccCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHHc
Q 017888 81 AKFKVGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLL 160 (364)
Q Consensus 81 ~~~kIA~vQ~~v~~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~ 160 (364)
++||||++|+++.+|++.|++++.+++++|+++|+|||||||++++||...++..+++.+ .++..+.++++|+++
T Consensus 2 ~~~~va~vQ~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~-----~~~~~~~l~~~a~~~ 76 (276)
T 2w1v_A 2 STFRLALIQLQVSSIKSDNLTRACSLVREAAKQGANIVSLPECFNSPYGTTYFPDYAEKI-----PGESTQKLSEVAKES 76 (276)
T ss_dssp CEEEEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCSTTTHHHHCBCS-----SSHHHHHHHHHHHHH
T ss_pred CccEEEEEeccccCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCCHHHHHHHhccC-----CCHHHHHHHHHHHHc
Confidence 469999999998899999999999999999999999999999999999876654444332 257999999999999
Q ss_pred CcEEEEeeeeeecCCeeEEEEEEEcCCCcEEEEeeccccCCCCCCCcccccccccccCCCCCeEEecCCeeEEEEEeccC
Q 017888 161 KITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYDI 240 (364)
Q Consensus 161 ~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~i~~~y~K~~L~~~~~P~~~~~~E~~~~~~G~~~~vf~~~~~rigv~IC~D~ 240 (364)
+++|++|++++++++++||++++|+++|+++++|+|+||++.++|.+..+.|..+|++|++..+|+++++|+|++||||.
T Consensus 77 ~~~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~vP~~e~~~E~~~f~~G~~~~v~~~~~~~ig~~ICyD~ 156 (276)
T 2w1v_A 77 SIYLIGGSIPEEDAGKLYNTCSVFGPDGSLLVKHRKIHLFDIDVPGKITFQESKTLSPGDSFSTFDTPYCKVGLGICYDM 156 (276)
T ss_dssp TSEEECCCEEEEETTEEEEEEEEECTTSCEEEEEECSSCCEEEETTTEEEEGGGTCCCCCCCCEEECSSCEEEECCGGGG
T ss_pred CeEEEecceeecCCCcEEEEEEEECCCCcEEEEEecccccCcccCccccccccccccCCCCceeEEeCCceEEEEEEecc
Confidence 99999997777668899999999999999999999999976555766667899999999999999999999999999999
Q ss_pred cccHHHHHHHhCCceEEEEeCCCCCCCChhHHHHHHHHHHHhcCcEEEEecCCCCCCCCeeeeeEeEEECCCCCEeEeCC
Q 017888 241 RFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDEGAGYVAWGHSTLVGPFGEVLATTE 320 (364)
Q Consensus 241 ~fpe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~g~~~~~~~~~G~S~Ii~p~G~il~~~~ 320 (364)
+|||+++.++++|||+|++|++|+...+..+|..++++||+||++||++||++|..+++..++|.|+|++|+|+++++++
T Consensus 157 ~fpe~~r~~~~~ga~ll~~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii~p~G~v~~~~~ 236 (276)
T 2w1v_A 157 RFAELAQIYAQRGCQLLVYPGAFNLTTGPAHWELLQRARAVDNQVYVATASPARDDKASYVAWGHSTVVDPWGQVLTKAG 236 (276)
T ss_dssp GCHHHHHHHHHTTEEEEEEECCCCTTHHHHHHHHHHHHHHHHHTCEEEEECCCCCTTSSSCCCCCCEEECTTSCEEEECC
T ss_pred ccHHHHHHHHHcCCCEEEECCcCCCcCCHHHHHHHHHHHHHHcCcEEEEecccccCCCCceeeeEeEEECCCCCEeEEcC
Confidence 99999999999999999999998876667889999999999999999999999887778889999999999999999987
Q ss_pred CCCcEEEEEEchhhHHHHHhcCCCccccccccchhhh
Q 017888 321 HAEDIIIAEIDYSILELRRTSLPLSKQRRGDLYQLVD 357 (364)
Q Consensus 321 ~~e~vl~~~ldl~~~~~~r~~~~~~~~~r~~ly~~~~ 357 (364)
.+++++++++|++.++..|..+|++++|||++|++.+
T Consensus 237 ~~e~~l~~~id~~~~~~~R~~~~~~~~~r~~~y~~~~ 273 (276)
T 2w1v_A 237 TEETILYSDIDLKKLAEIRQQIPILKQKRADLYTVES 273 (276)
T ss_dssp SSSEEEEEEEEHHHHHHHHHHSCGGGSCCTTTEEEEE
T ss_pred CCCeEEEEEEcHHHHHHHHHhCChhHhCCHHHhhccc
Confidence 7999999999999999999999999999999998654
No 2
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.6e-55 Score=414.13 Aligned_cols=263 Identities=27% Similarity=0.479 Sum_probs=238.7
Q ss_pred CCCCceEEEEEecccc-cCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHH
Q 017888 78 PPVAKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEV 156 (364)
Q Consensus 78 ~~~~~~kIA~vQ~~v~-~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~l 156 (364)
+..++||||++|+++. +|++.|++++.+++++|+++|+|||||||++++||...++...++.. .+++.+.++++
T Consensus 16 ~~~~~~kva~~Q~~~~~~d~~~Nl~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~~~~~~a~~~-----~~~~~~~l~~l 90 (281)
T 3p8k_A 16 PRGSHMKVQIYQLPIVFGDSSKNETQITQWFEKNMNAEVDVVVLPEMWNNGYDLEHLNEKADNN-----LGQSFSFIKHL 90 (281)
T ss_dssp CTTSEEEEEEEECCCCTTCHHHHHHHHHHHHHHHCCTTCCEEECCSSTTTTTCGGGHHHHSEET-----THHHHHHHHHH
T ss_pred ccCCCcEEEEEeccCCcCCHHHHHHHHHHHHHHHHhCCCcEEEcCCCccCCCChhHHHHhhhcc-----CcHHHHHHHHH
Confidence 4566799999999986 89999999999999999999999999999999999876544444432 25799999999
Q ss_pred HHHcCcEEEEeeeeeecCCeeEEEEEEEcCCCcEEEEeeccccCCCCCCCcccccccccccCCCCC-eEEec-CCeeEEE
Q 017888 157 ARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETP-TIVDT-DVGRIGI 234 (364)
Q Consensus 157 A~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~i~~~y~K~~L~~~~~P~~~~~~E~~~~~~G~~~-~vf~~-~~~rigv 234 (364)
|++++++|++|+..++.++++||++++|+++|+++++|+|+||+++ |.|..+|++|++. .+|++ +++|+|+
T Consensus 91 a~~~~i~iv~G~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~-------f~E~~~f~~G~~~~~v~~~~~~~~ig~ 163 (281)
T 3p8k_A 91 AEKYKVDIVAGSVSNIRNNQIFNTAFSVNKSGQLINEYDKVHLVPM-------LREHEFLTAGEYVAEPFQLSDGTYVTQ 163 (281)
T ss_dssp HHHHTCEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEECSCCCTT-------TTGGGTCCCCSSCCCCEECTTCCEEEE
T ss_pred HhhCCeEEEEeeeEEccCCcEEEEEEEEcCCCeEEEEEeeEECCCC-------cCccccCcCCCCCceeEEeCCCcEEEE
Confidence 9999999999976677789999999999999999999999999762 5789999999998 99999 9999999
Q ss_pred EEeccCcccHHHHHHHhCCceEEEEeCCCCCCCChhHHHHHHHHHHHhcCcEEEEecCCCCCCCCeeeeeEeEEECCCCC
Q 017888 235 GICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDEGAGYVAWGHSTLVGPFGE 314 (364)
Q Consensus 235 ~IC~D~~fpe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~g~~~~~~~~~G~S~Ii~p~G~ 314 (364)
+||||++|||+++.++.+|||+|++|++|+... ..+|..++++||+||++||++||++|.. ++..|+|.|+|++|+|+
T Consensus 164 ~IC~D~~fpe~~r~~~~~Gadli~~psa~~~~~-~~~~~~~~~arA~en~~~vv~~n~~G~~-~~~~~~G~S~ii~p~G~ 241 (281)
T 3p8k_A 164 LICYDLRFPELLRYPARSGAKIAFYVAQWPMSR-LQHWHSLLKARAIENNMFVIGTNSTGFD-GNTEYAGHSIVINPNGD 241 (281)
T ss_dssp EEGGGGGCTHHHHHHHHTTCCEEEEEECCBGGG-HHHHHHHHHHHHHHHTSEEEEEECEEEC-SSCEEECCCEEECTTSC
T ss_pred EEecCCCCcHHHHHHHHCCCCEEEECCCCCCcc-HHHHHHHHHHHHHHcCCEEEEEccCcCC-CCcEEeeeEEEECCCCC
Confidence 999999999999999999999999999987643 5789999999999999999999998764 46889999999999999
Q ss_pred EeEeCCCCCcEEEEEEchhhHHHHHhcCCCccccccccch
Q 017888 315 VLATTEHAEDIIIAEIDYSILELRRTSLPLSKQRRGDLYQ 354 (364)
Q Consensus 315 il~~~~~~e~vl~~~ldl~~~~~~r~~~~~~~~~r~~ly~ 354 (364)
++++..++++++++++|++.++..|..+|+++|||||+|+
T Consensus 242 vl~~~~~~e~~l~~~id~~~~~~~R~~~p~~~~rr~~lY~ 281 (281)
T 3p8k_A 242 LVGELNESADILTVDLNLNEVEQQRENIPVFKSIKLDLYK 281 (281)
T ss_dssp EEEECCSSCEEEEEEEETHHHHHHHHHSCGGGTCCTTTCC
T ss_pred EEEecCCCCeEEEEEEcHHHHHHHHHhCcchhhcChhhcC
Confidence 9999668999999999999999999999999999999995
No 3
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=100.00 E-value=1.6e-55 Score=415.82 Aligned_cols=275 Identities=51% Similarity=0.859 Sum_probs=232.9
Q ss_pred CCceEEEEEecc-cccCHHHHHHHHHHHHHHH--HHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCC--chHHHHHH
Q 017888 80 VAKFKVGLCQLS-VTADKERNIAHARRAIEEA--AEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDA--SPSTAMLS 154 (364)
Q Consensus 80 ~~~~kIA~vQ~~-v~~d~~~n~~~i~~~i~~A--~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~--~~~~~~l~ 154 (364)
..+||||++|++ ..+|++.|++++.+++++| +++|+|||||||++++||...++..+++.+. .. +++.+.++
T Consensus 8 ~~~~~va~vQ~~~~~~d~~~n~~~~~~~i~~a~~~~~gadlvv~PE~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~l~ 84 (291)
T 1f89_A 8 SQKIKVALVQLSGSSPDKMANLQRAATFIERAMKEQPDTKLVVLPECFNSPYSTDQFRKYSEVIN---PKEPSTSVQFLS 84 (291)
T ss_dssp SSCEEEEEEECCCCCSCHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTSCSCHHHHHHHTTBCC---SSSCCHHHHHHH
T ss_pred cccceEEEEeccCCcCCHHHHHHHHHHHHHHHhhccCCCeEEEcCCCcccCCChHHHHHHhhhhc---cCCCChHHHHHH
Confidence 446999999999 5699999999999999999 8899999999999999986433323333210 01 57899999
Q ss_pred HHHHHcCcEEEEeeeeeecC--CeeEEEEEEEcCCCcEEEEeeccccCCCCCCCcccccccccccCCCCCeEEecCCeeE
Q 017888 155 EVARLLKITIVGGSIPERSG--DRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRI 232 (364)
Q Consensus 155 ~lA~~~~i~Iv~Gs~~~~~~--~~~yNsa~vi~~~G~i~~~y~K~~L~~~~~P~~~~~~E~~~~~~G~~~~vf~~~~~ri 232 (364)
++|++++++|++|+++++++ +++||++++|+++|+++++|+|+|||+.++|.+..|.|..+|++|++..+|+++++|+
T Consensus 85 ~~a~~~~~~iv~G~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hLf~e~~P~~~~~~E~~~f~~G~~~~v~~~~~~~i 164 (291)
T 1f89_A 85 NLANKFKIILVGGTIPELDPKTDKIYNTSIIFNEDGKLIDKHRKVHLFDVDIPNGISFHESETLSPGEKSTTIDTKYGKF 164 (291)
T ss_dssp HHHHHSSCEEECCCEEEECTTTCCEEEEEEEECTTSCEEEEEECCCCC----------HHHHSCCCCCCCEEEEETTEEE
T ss_pred HHHHHcCcEEEeceeecccCCCCceEEEEEEECCCCcEEeEEeeeccCCCccCccccccccccccCCCCCceEecCCeeE
Confidence 99999999999997677665 7899999999999999999999999887778777778999999999999999999999
Q ss_pred EEEEeccCcccHHHHHHHhCCceEEEEeCCCCCCCChhHHHHHHHHHHHhcCcEEEEecCCCCCCCCeeeeeEeEEECCC
Q 017888 233 GIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDEGAGYVAWGHSTLVGPF 312 (364)
Q Consensus 233 gv~IC~D~~fpe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~g~~~~~~~~~G~S~Ii~p~ 312 (364)
|++||||++|||++|.++++|||+|++|++|+...+..+|..++++||+||++||++||++|...++..++|.|+|++|+
T Consensus 165 g~~ICyD~~fpe~~r~l~~~Ga~ll~~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~~G~S~ii~p~ 244 (291)
T 1f89_A 165 GVGICYDMRFPELAMLSARKGAFAMIYPSAFNTVTGPLHWHLLARSRAVDNQVYVMLCSPARNLQSSYHAYGHSIVVDPR 244 (291)
T ss_dssp EECCGGGGGCHHHHHHHHHTTEEEEEEECCCBTTHHHHHHHHHHHHHHHHHTSEEEEECCCCCTTSSSCBCCCCEEECTT
T ss_pred EEEEecccCchHHHHHHHhhCCCEEEECCcCCCCCcHHHHHHHHHHHHHHcCCEEEEecCccCCCCCCeeeeEEEEECCC
Confidence 99999999999999999999999999999987766778999999999999999999999998666778899999999999
Q ss_pred CCEeEeCCCCCcEEEEEEchhhHHHHHhcCCCccccccccchhhh
Q 017888 313 GEVLATTEHAEDIIIAEIDYSILELRRTSLPLSKQRRGDLYQLVD 357 (364)
Q Consensus 313 G~il~~~~~~e~vl~~~ldl~~~~~~r~~~~~~~~~r~~ly~~~~ 357 (364)
|+++++++.+++++++++|++.++..|..+|++++|||++|++++
T Consensus 245 G~vl~~~~~~e~~l~~~id~~~~~~~R~~~~~~~~~r~~~y~~~~ 289 (291)
T 1f89_A 245 GKIVAEAGEGEEIIYAELDPEVIESFRQAVPLTKQRRFDVYSDVN 289 (291)
T ss_dssp SCEEEECCSSSEEEEEEECHHHHHHHHHHSCCCCCCCC-------
T ss_pred CCEEEecCCCCeEEEEEECHHHHHHHHHhCChhHhCChhhhhhhc
Confidence 999999877999999999999999999999999999999998764
No 4
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=100.00 E-value=2.3e-54 Score=406.67 Aligned_cols=263 Identities=24% Similarity=0.345 Sum_probs=225.2
Q ss_pred CCCCceEEEEEecccc-cCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCcc-chhhhhccCCCCchHHHHHHH
Q 017888 78 PPVAKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFP-VYAEDIDAGGDASPSTAMLSE 155 (364)
Q Consensus 78 ~~~~~~kIA~vQ~~v~-~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~-~~~~~~~~~~~~~~~~~~l~~ 155 (364)
.+..+||||++|+++. +|++.|++++.+++++|+++|+|||||||++++||...++. .+++... +++++.+++
T Consensus 16 ~~~~~~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~l~gy~~~d~~~~~a~~~~-----~~~~~~l~~ 90 (283)
T 3hkx_A 16 IRGSHMRIALMQHTARPLDPQHNLDLIDDAAARASEQGAQLLLTPELFGFGYVPSQICAQVSAEQV-----DAARSRLRG 90 (283)
T ss_dssp CTTEEEEEEEEEBCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTGGGCSCHHHHHHHCCHHHH-----HHHHHHHHH
T ss_pred ecCCccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCChHHHHHHhccccC-----CHHHHHHHH
Confidence 4556799999999987 79999999999999999999999999999999999765322 3333221 468999999
Q ss_pred HHHHcCcEEEEeeeeeecC-CeeEEEEEEEcCCCcEEEEeeccccCCCCCCCcccccccccccCCCC-CeEEecCCeeEE
Q 017888 156 VARLLKITIVGGSIPERSG-DRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGET-PTIVDTDVGRIG 233 (364)
Q Consensus 156 lA~~~~i~Iv~Gs~~~~~~-~~~yNsa~vi~~~G~i~~~y~K~~L~~~~~P~~~~~~E~~~~~~G~~-~~vf~~~~~rig 233 (364)
+|++++++|++| ++++.+ +++||++++|+|+|+++++|+|+||++ +.|..+|++|++ ..+|+++++|||
T Consensus 91 ~a~~~~i~iv~G-~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~--------~~E~~~f~~G~~~~~v~~~~~~~ig 161 (283)
T 3hkx_A 91 IARDRGIALVWS-LPGPEGPEQRGITAELADEHGEVLASYQKVQLYG--------PEEKAAFVPGEQPPPVLSWGGRQLS 161 (283)
T ss_dssp HHHHTTSEEEEC-CBCSSCTTTCCBEEEEECTTSCEEEEEECSSCCH--------HHHHHHSCCCCSCCCEEEETTEEEE
T ss_pred HHHHhCCEEEEE-EEEEcCCCCEEEEEEEEcCCCcEEEEEccccCCC--------cCchhhccCCCCCceEEEECCEEEE
Confidence 999999999999 567665 789999999999999999999999964 148889999998 689999999999
Q ss_pred EEEeccCcccHHHHHHHhCCceEEEEeCCCCCCCChhHHHHHHHHHHHhcCcEEEEecCCCCCCCCeeeeeEeEEECCCC
Q 017888 234 IGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDEGAGYVAWGHSTLVGPFG 313 (364)
Q Consensus 234 v~IC~D~~fpe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~g~~~~~~~~~G~S~Ii~p~G 313 (364)
++||||++|||+++.++.+|||+|++|++|+...+ .+|..++++||+||++||++||.+|.. ++..++|.|+|++|+|
T Consensus 162 ~~IC~D~~fpe~~r~l~~~Ga~li~~ps~~~~~~~-~~~~~~~~~rA~en~~~vv~~n~~G~~-~~~~~~G~S~ii~p~G 239 (283)
T 3hkx_A 162 LLVCYDVEFPEMVRAAAARGAQLVLVPTALAGDET-SVPGILLPARAVENGITLAYANHCGPE-GGLVFDGGSVVVGPAG 239 (283)
T ss_dssp ECCGGGGGSHHHHHHHHHTTCSEEEEECCCBSCCT-HHHHTHHHHHHHHHTCEEEEECBEEEE-TTEEEECCCEEECTTS
T ss_pred EEEecCcCCHHHHHHHHHCCCCEEEECCCCCCccc-HHHHHHHHHHHHHhCCEEEEEccccCC-CCeEEeeEEEEECCCC
Confidence 99999999999999999999999999999876543 689999999999999999999998754 4788999999999999
Q ss_pred CEeEeCCCCCcEEEEEEchhhHHHHHhcCCCccccccccchhh
Q 017888 314 EVLATTEHAEDIIIAEIDYSILELRRTSLPLSKQRRGDLYQLV 356 (364)
Q Consensus 314 ~il~~~~~~e~vl~~~ldl~~~~~~r~~~~~~~~~r~~ly~~~ 356 (364)
+++++++++++++++++|++.++..|..+|++++||||+|+.+
T Consensus 240 ~vl~~~~~~e~~l~a~id~~~~~~~R~~~~~~~~rr~~ly~~l 282 (283)
T 3hkx_A 240 QPLGELGVEPGLLVVDLPDQSQDAGSDSADYLQDRRAELHRNW 282 (283)
T ss_dssp CEEEECCSSCEEEEEEEEC----------CHHHHSCHHHHHHH
T ss_pred CEEEecCCCCeEEEEEECHHHHHHHHHhCChhHhcCHhhhhhc
Confidence 9999998999999999999999999999999999999999753
No 5
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=100.00 E-value=4.9e-53 Score=393.23 Aligned_cols=255 Identities=31% Similarity=0.494 Sum_probs=229.3
Q ss_pred eEEEEEecccc-cCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHHcC
Q 017888 83 FKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLK 161 (364)
Q Consensus 83 ~kIA~vQ~~v~-~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~ 161 (364)
||||++|+++. +|++.|++++.+++++|+++|+|||||||++++||...+...+.+... ....++.++.++++|++++
T Consensus 2 ~rva~~Q~~~~~~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~~~gy~~~~~~~~~~~a~-~~~~~~~~~~l~~~a~~~~ 80 (262)
T 3ivz_A 2 VKVAYVQMNPQILEPDKNYSKAEKLIKEASKQGAQLVVLPELFDTGYNFETREEVFEIAQ-KIPEGETTTFLMDVARDTG 80 (262)
T ss_dssp CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCSCHHHHHHHCB-CTTTSHHHHHHHHHHHHHC
T ss_pred eEEEEEeccCCCCCHHHHHHHHHHHHHHHHHCCCCEEEeCCCcccCCCCCCHHHHHHhcC-ccCCCHHHHHHHHHHHHcC
Confidence 89999999987 999999999999999999999999999999999998765332211111 0123579999999999999
Q ss_pred cEEEEeeeeeecCCeeEEEEEEEcCCCcEEEEeeccccCCCCCCCcccccccccccCCC-CCeEEecCCeeEEEEEeccC
Q 017888 162 ITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGE-TPTIVDTDVGRIGIGICYDI 240 (364)
Q Consensus 162 i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~i~~~y~K~~L~~~~~P~~~~~~E~~~~~~G~-~~~vf~~~~~rigv~IC~D~ 240 (364)
++|++| +++++++++||++++++++| ++++|+|+||+ +.|..+|++|+ ...+|+++++|+|++||||.
T Consensus 81 ~~iv~G-~~~~~~~~~yNs~~~i~~~G-~~~~y~K~hL~---------~~E~~~f~~G~~~~~v~~~~~~~ig~~IC~D~ 149 (262)
T 3ivz_A 81 VYIVAG-TAEKDGDVLYNSAVVVGPRG-FIGKYRKIHLF---------YREKFFFEPGDLGFRVFDLGFMKVGVMICFDW 149 (262)
T ss_dssp CEEEEE-EEEEETTEEEEEEEEEETTE-EEEEEECSSCC---------GGGGGTCBCCCSCSCEEECSSCEEEECCGGGG
T ss_pred cEEEEe-EEEeeCCcEEEEEEEEcCCe-eEEEEeecccC---------CchhceEeCCCCCceEEEECCEEEEEEEecCC
Confidence 999999 78888999999999999999 99999999993 47899999999 89999999999999999999
Q ss_pred cccHHHHHHHhCCceEEEEeCCCCCCCChhHHHHHHHHHHHhcCcEEEEecCCCCCCCCeeeeeEeEEECCCCCEeEeCC
Q 017888 241 RFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDEGAGYVAWGHSTLVGPFGEVLATTE 320 (364)
Q Consensus 241 ~fpe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~g~~~~~~~~~G~S~Ii~p~G~il~~~~ 320 (364)
+|||+++.++.+|||+|++|++|+.. +|..+.++||+||++||++||..|... +..++|+|+|++|+|+++++++
T Consensus 150 ~fpe~~r~~~~~ga~li~~ps~~~~~----~~~~~~~~rA~en~~~vv~~n~~G~~~-~~~~~G~S~ii~p~G~il~~~~ 224 (262)
T 3ivz_A 150 FFPESARTLALKGADVIAHPANLVMP----YAPRAMPIRALENKVYTVTADRVGEER-GLKFIGKSLIASPKAEVLSMAS 224 (262)
T ss_dssp GSHHHHHHHHHTTCSEEEEEECCCSS----CHHHHHHHHHHHHTCEEEEEECCSEET-TEECCCCCEEECTTSCEEEECC
T ss_pred CchHHHHHHHHCCCCEEEEcCCCCch----HHHHHHHHHHHhcCcEEEEECCCCcCC-CceEeeeEEEECCCCCEeecCC
Confidence 99999999999999999999998652 799999999999999999999987653 6789999999999999999986
Q ss_pred -CCCcEEEEEEchhhHHHHHhc--CCCccccccccch
Q 017888 321 -HAEDIIIAEIDYSILELRRTS--LPLSKQRRGDLYQ 354 (364)
Q Consensus 321 -~~e~vl~~~ldl~~~~~~r~~--~~~~~~~r~~ly~ 354 (364)
++++++++++|++.+++.|.+ +|+++|||||+|+
T Consensus 225 ~~~~~~~~~~id~~~~~~~R~~~~~p~l~~rr~~lY~ 261 (262)
T 3ivz_A 225 ETEEEVGVAEIDLSLVRNKRINDLNDIFKDRREEYYF 261 (262)
T ss_dssp SSCCEEEEEECCHHHHHCCEEETTEEHHHHCCGGGSC
T ss_pred CCCceEEEEEEcHHHHHHHhhcccCchhhhcCHhhhC
Confidence 677899999999999999987 8999999999996
No 6
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.1e-52 Score=391.63 Aligned_cols=257 Identities=23% Similarity=0.298 Sum_probs=229.2
Q ss_pred CceEEEEEecccc-cCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHH
Q 017888 81 AKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARL 159 (364)
Q Consensus 81 ~~~kIA~vQ~~v~-~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~ 159 (364)
.+||||++|+++. +|++.|++++.+++++| ++|+|||||||++++||... ....++.. .+++.+.++++|++
T Consensus 2 ~~~kva~~Q~~~~~~d~~~n~~~~~~~i~~a-~~gadlvv~PE~~~~gy~~~-~~~~a~~~-----~~~~~~~l~~~a~~ 74 (266)
T 2e11_A 2 HDLRISLVQGSTRWHDPAGNRDYYGALLEPL-AGQSDLVILPETFTSGFSNE-AIDKAEDM-----DGPTVAWIRTQAAR 74 (266)
T ss_dssp CCEEEEEEECCCCTTCHHHHHHHHHHHHGGG-TTTCSEEECCTTTTTCSCSG-GGGGCEET-----TSHHHHHHHHHHHH
T ss_pred CccEEEEEeCCCCcCCHHHHHHHHHHHHHHh-cCCCCEEECCCCccccCChh-HHHhhccC-----CCHHHHHHHHHHHH
Confidence 4599999999987 89999999999999999 89999999999999999532 12222221 35799999999999
Q ss_pred cCcEEEEeeeeeecCCeeEEEEEEEcCCCcEEEEeeccccCCCCCCCcccccccccccCCCCCeEEecCCeeEEEEEecc
Q 017888 160 LKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIVDTDVGRIGIGICYD 239 (364)
Q Consensus 160 ~~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~i~~~y~K~~L~~~~~P~~~~~~E~~~~~~G~~~~vf~~~~~rigv~IC~D 239 (364)
++++|++| .++++++++||++++++++|+++ +|+|+||+++ +.|..+|++|++..+|+++++|+|++||||
T Consensus 75 ~~~~iv~G-~~~~~~~~~yNs~~~i~~~G~i~-~y~K~hL~~~-------~~E~~~f~~G~~~~v~~~~~~~ig~~ICyD 145 (266)
T 2e11_A 75 LGAAITGS-VQLRTEHGVFNRLLWATPDGALQ-YYDKRHLFRF-------GNEHLRYAAGRERLCVEWKGWRINPQVCYD 145 (266)
T ss_dssp HTSEEEEE-EEEEETTEEEEEEEEECTTSCEE-EEECSSCCGG-------GTTTTTSBCCCSCCCEEETTEEEEEEEGGG
T ss_pred hCCEEEEe-eeEccCCcEEEEEEEECCCCCEE-EEeeeccCCC-------cChhhhccCCCCceEEEECCEEEEEEEEec
Confidence 99999999 45667889999999999999999 9999999864 368899999999999999999999999999
Q ss_pred CcccHHHHHHH---hC---CceEEEEeCCCCCCCChhHHHHHHHHHHHhcCcEEEEecCCCCCCCCeeeeeEeEEECCCC
Q 017888 240 IRFQELAMIYG---AR---GAHLICYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDEGAGYVAWGHSTLVGPFG 313 (364)
Q Consensus 240 ~~fpe~~r~~~---~~---Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~g~~~~~~~~~G~S~Ii~p~G 313 (364)
++|||+.+.++ ++ |||+|++|++|+.. ...+|..++++||+||++||++||.+|..+++..+.|+|+|++|+|
T Consensus 146 ~~fpe~~r~~~~~~~~~~~ga~~i~~~s~w~~~-~~~~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~ii~p~G 224 (266)
T 2e11_A 146 LRFPVFCRNRFDVERPGQLDFDLQLFVANWPSA-RAYAWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLG 224 (266)
T ss_dssp GGCTTTTCCCBSSSSTTSBSCSEEEEEECCCGG-GHHHHHHHHHHHHHHTTSEEEEEECEEECTTSCEEEEEEEEECTTS
T ss_pred cCCHHHHHHHHhhhhccCCCCcEEEEeCCCCCC-chHHHHHHHHHHHHhcCcEEEEEcCCcCCCCCceEeeeEEEECCCC
Confidence 99999999865 54 99999999998764 3458999999999999999999999987766688999999999999
Q ss_pred CEeEeCCCCCcEEEEEEchhhHHHHHhcCCCccccccccch
Q 017888 314 EVLATTEHAEDIIIAEIDYSILELRRTSLPLSKQRRGDLYQ 354 (364)
Q Consensus 314 ~il~~~~~~e~vl~~~ldl~~~~~~r~~~~~~~~~r~~ly~ 354 (364)
+++++++++++++++++|++.++..|..+|+++||||++|+
T Consensus 225 ~v~~~~~~~e~~l~~~id~~~~~~~R~~~~~~~~rr~~~y~ 265 (266)
T 2e11_A 225 QPQVEIREQEQVVTTTISAAALAEHRARFPAMLDGDSFVLG 265 (266)
T ss_dssp CEEEEEESSCEEEEEEECHHHHHHHHHHSCGGGGCCCEEEC
T ss_pred ceeeecCCCCeEEEEEEcHHHHHHHHHhCChhhhcChhhhc
Confidence 99998888899999999999999999999999999999996
No 7
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=100.00 E-value=2.8e-52 Score=415.47 Aligned_cols=276 Identities=35% Similarity=0.573 Sum_probs=245.1
Q ss_pred CCCceEEEEEecccccCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCc-cchhhhhccCCCCchHHHHHHHHH
Q 017888 79 PVAKFKVGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSF-PVYAEDIDAGGDASPSTAMLSEVA 157 (364)
Q Consensus 79 ~~~~~kIA~vQ~~v~~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~-~~~~~~~~~~~~~~~~~~~l~~lA 157 (364)
.+++||||++|+++..|++.|++++.+++++|+++|+|||||||++++||...+. ...++.+. ++..+.++++|
T Consensus 11 ~~~~~kVa~vQ~~~~~d~~~nl~~~~~li~~A~~~gadlvv~PE~~~~~~~~~~~~~~~a~~~~-----~~~~~~l~~~A 85 (440)
T 1ems_A 11 ATGRHFIAVCQMTSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMATD-----CEYMEKYRELA 85 (440)
T ss_dssp CCSEEEEEEECBCCCSCHHHHHHHHHHHHHHHHHTTCSEEEECTTCSCCCSSHHHHHHHHHHHH-----HHHHHHHHHHH
T ss_pred ccCCceEEEEecCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCcccccCcchhHHHHhhccCC-----CHHHHHHHHHH
Confidence 3467999999999889999999999999999999999999999999988754211 11222221 46889999999
Q ss_pred HHcCcEEEEeeee--ee-cCCeeEEEEEEEcCCCcEEEEeeccccCCCCCCCcccccccccccCCCCCeE-EecCCeeEE
Q 017888 158 RLLKITIVGGSIP--ER-SGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTI-VDTDVGRIG 233 (364)
Q Consensus 158 ~~~~i~Iv~Gs~~--~~-~~~~~yNsa~vi~~~G~i~~~y~K~~L~~~~~P~~~~~~E~~~~~~G~~~~v-f~~~~~rig 233 (364)
++++++|++|+.. ++ .++++||++++|+++|+++++|+|+||+++++|.+..|.|..+|++|++..+ |+++++|+|
T Consensus 86 ~~~~i~iv~G~~~~~e~~~~~~~yNs~~~i~~~G~i~~~yrK~hL~~~~~P~~~~~~E~~~f~~G~~~~~~~~~~~~~iG 165 (440)
T 1ems_A 86 RKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHLFDLEIPGKVRLMESEFSKAGTEMIPPVDTPIGRLG 165 (440)
T ss_dssp HHTTCEEEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEECCCCCEEEETTTEEEEGGGTCCCCCSCCCCEEETTEEEC
T ss_pred HHcCeEEEeccccccccCCCCcEEEEEEEECCCCcEEEEEeeeeecCccCCCCCcccccccccCCCCCceeEECCCeeEE
Confidence 9999999999665 44 3578999999999999999999999998766677777889999999999888 999999999
Q ss_pred EEEeccCcccHHHHHHHhCCceEEEEeCCCCCCCChhHHHHHHHHHHHhcCcEEEEecCCCCCCCCeeeeeEeEEECCCC
Q 017888 234 IGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDEGAGYVAWGHSTLVGPFG 313 (364)
Q Consensus 234 v~IC~D~~fpe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~g~~~~~~~~~G~S~Ii~p~G 313 (364)
++||||.+|||+++.++.+|||++++|++|+...+..+|..++++||+||++||++||++|..+++..++|.|+|++|+|
T Consensus 166 ~~ICyD~~fpe~~r~l~~~Ga~il~~psa~~~~~~~~~~~~~~~arA~En~~~vv~an~~G~~~~~~~~~G~S~ii~P~G 245 (440)
T 1ems_A 166 LSICYDVRFPELSLWNRKRGAQLLSFPSAFTLNTGLAHWETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPWG 245 (440)
T ss_dssp CCCGGGGGCHHHHHHHHHTTCSEEECCBCCCHHHHHHHHHHHHHHHHHHHTCEEEECBBEEEEETTEEEECCCEEECTTS
T ss_pred EEEeccccChHHHHHHHHcCCcEEEECCcCCCCCcHHHHHHHHHHHHHhcCcEEEEecccccCCCCceeeeeeEEECCCC
Confidence 99999999999999999999999999999876556678999999999999999999999987666788999999999999
Q ss_pred CEeEeCCCCCcEEEEEEchhhHHHHHhcCCCccccccccchhhhhh
Q 017888 314 EVLATTEHAEDIIIAEIDYSILELRRTSLPLSKQRRGDLYQLVDIQ 359 (364)
Q Consensus 314 ~il~~~~~~e~vl~~~ldl~~~~~~r~~~~~~~~~r~~ly~~~~~~ 359 (364)
+++++++.+++++++++|++.++..|..+|++++||||+|++...+
T Consensus 246 ~vla~~~~~e~il~a~idl~~~~~~R~~~~~~~~rr~~~y~~~~~~ 291 (440)
T 1ems_A 246 AVVAQCSERVDMCFAEIDLSYVDTLREMQPVFSHRRSDLYTLHINE 291 (440)
T ss_dssp CEEEECCSSSCEEEEEEEHHHHHHHHHHSCGGGSCCTTTCCCCCCC
T ss_pred CeeccCCCCCcEEEEEeCHHHHHHHHHhCChhhhcChhhhhccccc
Confidence 9999998899999999999999999999999999999999987653
No 8
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=100.00 E-value=7.9e-51 Score=400.20 Aligned_cols=271 Identities=24% Similarity=0.419 Sum_probs=225.6
Q ss_pred CCCCceEEEEEecccc--------cCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCC-----ccchhhhhccCC
Q 017888 78 PPVAKFKVGLCQLSVT--------ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDS-----FPVYAEDIDAGG 144 (364)
Q Consensus 78 ~~~~~~kIA~vQ~~v~--------~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~-----~~~~~~~~~~~~ 144 (364)
.+.+.||||++|+++. ++++.|++++.+++++|+++|+|||||||++++||.... +..+++..
T Consensus 68 ~~~~~~rVAlvQ~~i~~~~~~~~~~d~~~nl~~~~~li~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~ae~~---- 143 (405)
T 2vhh_A 68 RKRRIVRVGAIQNSIVIPTTAPIEKQREAIWNKVKTMIKAAAEAGCNIVCTQEAWTMPFAFCTREKFPWCEFAEEA---- 143 (405)
T ss_dssp SCCCEEEEEEEECCCCSCSSSCHHHHHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCSCC---------CCCBCT----
T ss_pred cCCCCCEEEEEeccccccccccccccHHHHHHHHHHHHHHHHHCCCCEEEcCCcccccccccccchhhHHHHHhhc----
Confidence 3345699999999863 478999999999999999999999999999999985421 11222221
Q ss_pred CCchHHHHHHHHHHHcCcEEEEeeeeeec---CCeeEEEEEEEcCCCcEEEEeeccccCCCCCCCcccccccccccCCCC
Q 017888 145 DASPSTAMLSEVARLLKITIVGGSIPERS---GDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGET 221 (364)
Q Consensus 145 ~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~---~~~~yNsa~vi~~~G~i~~~y~K~~L~~~~~P~~~~~~E~~~~~~G~~ 221 (364)
..++.++.++++|++++++|++| +.++. ++++||++++|+++|+++++|+|+||++++ .|.|..+|.+|+.
T Consensus 144 ~~~~~~~~l~~lA~~~~i~Iv~G-~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~hL~~~g-----~f~E~~~f~~G~~ 217 (405)
T 2vhh_A 144 ENGPTTKMLAELAKAYNMVIIHS-ILERDMEHGETIWNTAVVISNSGRYLGKHRKNHIPRVG-----DFNESTYYMEGNT 217 (405)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEE-EEEEETTTTTEEEEEEEEECTTSCEEEEEECSCCCC---------------CCCCS
T ss_pred cCCHHHHHHHHHHHHCCEEEEEe-ceecccCCCCcEEEEEEEECCCCeEEEEEecccCCCCC-----CcCcccceeCCCC
Confidence 13578999999999999999999 56655 578999999999999999999999997643 5678999999985
Q ss_pred -CeEEecCCeeEEEEEeccCcccHHHHHHHhCCceEEEEeCCCCCCCChhHHHHHHHHHHHhcCcEEEEecCCCCCC---
Q 017888 222 -PTIVDTDVGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDEG--- 297 (364)
Q Consensus 222 -~~vf~~~~~rigv~IC~D~~fpe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~g~~~--- 297 (364)
..+|+++++|||++||||++|||+++.++.+|||+|++|++|....+..+|..++++||+||++||+++|++|...
T Consensus 218 ~~~vf~~~~~riG~~ICyD~~fPe~~r~la~~GAdill~psa~~~~~~~~~w~~l~raRAiEn~~~Vv~aN~vG~~~~~~ 297 (405)
T 2vhh_A 218 GHPVFETEFGKLAVNICYGRHHPQNWMMFGLNGAEIVFNPSATIGRLSEPLWSIEARNAAIANSYFTVPINRVGTEQFPN 297 (405)
T ss_dssp CCCEEEETTEEEEECCGGGGGCHHHHHHHHHTTCSEEEEEECCBCTTTHHHHHHHHHHHHHHHTSEEEEEECEECCCCC-
T ss_pred CCeeEEECCEEEEEEEeccccChHHHHHHHHcCCCEEEEcccCCCCCCHHHHHHHHHHHHHHcCceEEEecccccccccc
Confidence 8999999999999999999999999999999999999999987665677899999999999999999999987642
Q ss_pred ------------CCeeeeeEeEEECCCCCEeEeCC-CCCcEEEEEEchhhHHHHHhcCCCccccccccchhhhh
Q 017888 298 ------------AGYVAWGHSTLVGPFGEVLATTE-HAEDIIIAEIDYSILELRRTSLPLSKQRRGDLYQLVDI 358 (364)
Q Consensus 298 ------------~~~~~~G~S~Ii~p~G~il~~~~-~~e~vl~~~ldl~~~~~~r~~~~~~~~~r~~ly~~~~~ 358 (364)
+...++|.|+|++|+|++++.++ ++++++++++|++.++..|..+|++++|||++|+.+..
T Consensus 298 ~~~~~~g~~~~~~~~~f~G~S~IidP~G~vla~~~~~~e~il~aeiDl~~~~~~R~~~p~~~~rR~~lY~~~~~ 371 (405)
T 2vhh_A 298 EYTSGDGNKAHKEFGPFYGSSYVAAPDGSRTPSLSRDKDGLLVVELDLNLCRQVKDFWGFRMTQRVPLYAESFK 371 (405)
T ss_dssp ----------------EECCCCCBCTTSCBCCCCCSSSCEEEEEEEETTHHHHHHHHHCTTTTCCHHHHHHHHH
T ss_pred ccccccCccccccCceeccccceECCCCCEeeccCCCCCeEEEEEECHHHHHHHHHhCCchhhcCHHHHHHHHH
Confidence 22468999999999999999886 78999999999999999999999999999999988655
No 9
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=100.00 E-value=4.3e-50 Score=380.57 Aligned_cols=272 Identities=25% Similarity=0.335 Sum_probs=228.8
Q ss_pred ceEEEEEecccc---cCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccch----hhhhccCCCCchHHHHHH
Q 017888 82 KFKVGLCQLSVT---ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVY----AEDIDAGGDASPSTAMLS 154 (364)
Q Consensus 82 ~~kIA~vQ~~v~---~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~----~~~~~~~~~~~~~~~~l~ 154 (364)
+||||++|+++. +|++.|++++.+++++|+++|+|||||||++++||...++... ....+. .+.++.++.++
T Consensus 3 ~~~va~~Q~~~~~~~~d~~~n~~~~~~~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~ 81 (303)
T 1uf5_A 3 QMILAVGQQGPIARAETREQVVVRLLDMLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYET-EMPGPVVRPLF 81 (303)
T ss_dssp EEEEEEEEBCCCCTTCCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTSCCGGGSCCCCHHHHHTTSBS-SSSCTTTHHHH
T ss_pred cEEEEEEEecCcccccCHHHHHHHHHHHHHHHHhcCCCEEEeccccccCCCccccccchhhhHHHHhh-cCCCHHHHHHH
Confidence 599999999975 6999999999999999999999999999999999965331000 011110 11356889999
Q ss_pred HHHHHcCcEEEEeeeeeec-CC---eeEEEEEEEcCCCcEEEEeeccccCCCC--CCCcccc--cccccccCCC-CCeEE
Q 017888 155 EVARLLKITIVGGSIPERS-GD---RLYNTCCVFGSDGKLIAKHRKIHLFDID--IPGKITF--IESKSLTAGE-TPTIV 225 (364)
Q Consensus 155 ~lA~~~~i~Iv~Gs~~~~~-~~---~~yNsa~vi~~~G~i~~~y~K~~L~~~~--~P~~~~~--~E~~~~~~G~-~~~vf 225 (364)
++|++++++|++| ++++. ++ ++||++++++++|+++++|+|+||++++ +|. ..| .|..+|++|+ +..+|
T Consensus 82 ~~a~~~~~~iv~G-~~~~~~~~~~~~~yNs~~~i~~~G~i~~~y~K~hL~~~~e~~p~-~~~~~~E~~~f~~G~~~~~v~ 159 (303)
T 1uf5_A 82 EKAAELGIGFNLG-YAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAY-RPFQHLEKRYFEPGDLGFPVY 159 (303)
T ss_dssp HHHHHHTCEEEEE-EEEEEEETTEEEEEEEEEEECTTSCEEEEEECCCCCSCSSCCTT-CSSCCCHHHHCCCCSSCSCEE
T ss_pred HHHHHhCeEEEEe-eeEecCCCCCcceeeEEEEECCCCCEeeeEeeeecCCccccccc-ccccccchhhccCCCCCCceE
Confidence 9999999999999 45553 45 7999999999999999999999996332 332 234 6888999999 89999
Q ss_pred ecCCeeEEEEEeccCcccHHHHHHHhCCceEEEEeCC---CCCCC------ChhHHHHHHHHHHHhcCcEEEEecCCCCC
Q 017888 226 DTDVGRIGIGICYDIRFQELAMIYGARGAHLICYPGA---FNMTT------GPLHWELLQRARATDNQLYVATCSPARDE 296 (364)
Q Consensus 226 ~~~~~rigv~IC~D~~fpe~~r~~~~~Gadlil~ps~---~~~~~------~~~~~~~~~~~rA~en~~~vv~~n~~g~~ 296 (364)
+++++|+|++||||++|||+++.++++|||+|+++++ |+... ...+|..+.++||+||++||++||++|..
T Consensus 160 ~~~~~~ig~~ICyD~~fpe~~r~l~~~ga~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~G~~ 239 (303)
T 1uf5_A 160 DVDAAKMGMFIANDRRWPEAWRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWSAAAGKAGME 239 (303)
T ss_dssp EETTEEEEECCGGGGGCHHHHHHHHHTTCSEEEEEECCBSCCTTCGGGGGGHHHHHHHHHHHHHHHHTCEEEEEEBCEEE
T ss_pred ecCCceEEEEEecCccCHHHHHHHHHCCCCEEEEecCCccccccccCCccccHHHHHHHHHhhhhcCCcEEEEECccccc
Confidence 9999999999999999999999999999999976655 43333 34578888999999999999999999854
Q ss_pred CCCeeeeeEeEEECCCCCEeEeCC-CCCcEEEEEEchhhHHHHHhc-CCCccccccccchhhh
Q 017888 297 GAGYVAWGHSTLVGPFGEVLATTE-HAEDIIIAEIDYSILELRRTS-LPLSKQRRGDLYQLVD 357 (364)
Q Consensus 297 ~~~~~~~G~S~Ii~p~G~il~~~~-~~e~vl~~~ldl~~~~~~r~~-~~~~~~~r~~ly~~~~ 357 (364)
++..++|+|+|++|+|+++++++ ++++++++++|++.++..|.. +|++++|||++|+++.
T Consensus 240 -~~~~~~G~S~ii~p~G~vl~~~~~~~~~~l~~~id~~~~~~~R~~~~~~~~~rr~~~y~~~~ 301 (303)
T 1uf5_A 240 -ENCMLLGHSCIVAPTGEIVALTTTLEDEVITAAVDLDRCRELREHIFNFKQHRQPQHYGLIA 301 (303)
T ss_dssp -TTEEECCCCEEECTTSCEEEECCSSSSEEEEEEEEGGGGHHHHTTTTCHHHHCCGGGCGGGG
T ss_pred -CCccccceeEEECCCCCEeccCCCCCCcEEEEEEcHHHHHHHHhhcccchhccCHHHHHHhh
Confidence 36789999999999999999986 678999999999999999999 9999999999998764
No 10
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=100.00 E-value=8.4e-46 Score=356.09 Aligned_cols=249 Identities=21% Similarity=0.292 Sum_probs=214.0
Q ss_pred CceEEEEEeccc-----ccCHHHHHHHHHHHHHHHHH--CCCcEEEcCCCCCCCCCCCC--ccchhhhhccCCCCchHHH
Q 017888 81 AKFKVGLCQLSV-----TADKERNIAHARRAIEEAAE--KGAKLILLPEIWNSPYSHDS--FPVYAEDIDAGGDASPSTA 151 (364)
Q Consensus 81 ~~~kIA~vQ~~v-----~~d~~~n~~~i~~~i~~A~~--~gadLvVfPE~~l~gy~~~~--~~~~~~~~~~~~~~~~~~~ 151 (364)
.+||||++|+++ .+|++.|++++.+++++|++ .|+|||||||++++||.+.. ..++++. ..++.++
T Consensus 12 ~~~~Va~vQ~~i~~~~~~~d~~~nl~~~~~li~~A~~~~~gadLVVfPE~~l~G~~~~~~~~~~~a~~-----~~~~~~~ 86 (334)
T 2dyu_A 12 EGFLVAAIQFPVPIVNSRKDIDHNIESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKWLSEEFLLD-----VPGKETE 86 (334)
T ss_dssp -CEEEEEECCBCCCCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTTCCCTTTTTSGGGCBC-----SSSHHHH
T ss_pred CccEEEEEecCCccCCchhhHHHHHHHHHHHHHHHHhcCCCCcEEEcCCCccccCCCChhHHHHhhcc-----CCCHHHH
Confidence 359999999984 26899999999999999988 79999999999999986543 2223222 1357999
Q ss_pred HHHHHHHHcCcEEEEeeeeeec-CCe--eEEEEEEEcCCCcEEEEeeccccCCCCCCCcccccccccccCCCCCe-EEec
Q 017888 152 MLSEVARLLKITIVGGSIPERS-GDR--LYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPT-IVDT 227 (364)
Q Consensus 152 ~l~~lA~~~~i~Iv~Gs~~~~~-~~~--~yNsa~vi~~~G~i~~~y~K~~L~~~~~P~~~~~~E~~~~~~G~~~~-vf~~ 227 (364)
.|+++|++++++|++| ++++. +++ +||++++|+|+|+++++|+|+||+. |..+|.+|+... +|++
T Consensus 87 ~l~~~a~~~~i~iv~G-~~e~~~~~~~~~yNsa~vi~p~G~i~~~YrK~hlf~----------e~~~f~~G~~~~~v~~~ 155 (334)
T 2dyu_A 87 LYAKACKEAKVYGVFS-IMERNPDSNKNPYNTAIIIDPQGEIILKYRKLFPWN----------PIEPWYPGDLGMPVCEG 155 (334)
T ss_dssp HHHHHHHHHTCEEEEE-EEECCSSTTSCCEEEEEEECTTSCEEEEEECSSCCT----------TTCCCCCCCSCCCCEEC
T ss_pred HHHHHHHHhCeEEEEe-eEEECCCCCceeEEEEEEECCCCCEEEEEeeccCCC----------CcccCcCCCCCceeEEC
Confidence 9999999999999999 55654 344 9999999999999999999999853 445789998755 9998
Q ss_pred C-CeeEEEEEeccCcccHHHHHHHhCCceEEEEeCCCCCCCChhHHHHHHHHHHHhcCcEEEEecCCCCCCCCeeeeeEe
Q 017888 228 D-VGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDEGAGYVAWGHS 306 (364)
Q Consensus 228 ~-~~rigv~IC~D~~fpe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~g~~~~~~~~~G~S 306 (364)
+ +.|+|++||||++|||++|.++.+|||+|++|++|+.. ...+|..++++||+||++||++||++|.. ++..++|.|
T Consensus 156 ~~g~~iG~~ICyD~~fpe~~r~~~~~Gadlil~psaw~~~-~~~~~~~~~~arA~En~~~vv~an~~G~~-~~~~~~G~S 233 (334)
T 2dyu_A 156 PGGSKLAVCICHDGMIPELAREAAYKGCNVYIRISGYSTQ-VNDQWILTNRSNAWHNLMYTVSVNLAGYD-NVFYYFGEG 233 (334)
T ss_dssp GGGCEEEEEEGGGGGCHHHHHHHHHTTCSEEEEEESSCTT-SHHHHHHHHHHHHHHHTCEEEEEECSBSS-SSCCCCCEE
T ss_pred CCCCEEEEEEECCCCchHHHHHHHHcCCCEEEEeCCCCCC-cHHHHHHHHHHHHHhCCCEEEEECCCcCC-CCeeeeeEE
Confidence 4 56999999999999999999999999999999998754 46789999999999999999999998865 467899999
Q ss_pred EEECCCCCEeEeCC-CCCcEEEEEEchhhHHHHHhcCCCccc
Q 017888 307 TLVGPFGEVLATTE-HAEDIIIAEIDYSILELRRTSLPLSKQ 347 (364)
Q Consensus 307 ~Ii~p~G~il~~~~-~~e~vl~~~ldl~~~~~~r~~~~~~~~ 347 (364)
+|++|+|+++++++ ++++++++++|++.++..|..+|+..+
T Consensus 234 ~Iidp~G~vla~~~~~~e~il~a~idl~~~~~~R~~~~~~~~ 275 (334)
T 2dyu_A 234 QICNFDGTTLVQGHRNPWEIVTGEIYPKMADNARLSWGLENN 275 (334)
T ss_dssp EEECTTSCEEEECCCCTTCEEEEEECHHHHHHHHHHCSTTCH
T ss_pred EEECCCCCEeeecCCCCCeEEEEEEcHHHHHHHHhhCchhhh
Confidence 99999999999986 689999999999999999998887544
No 11
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=100.00 E-value=5.2e-46 Score=358.49 Aligned_cols=248 Identities=21% Similarity=0.215 Sum_probs=214.3
Q ss_pred CCceEEEEEeccc-----ccCHHHHHHHHHHHHHHHHH--CCCcEEEcCCCCCCCCCCCC--ccchhhhhccCCCCchHH
Q 017888 80 VAKFKVGLCQLSV-----TADKERNIAHARRAIEEAAE--KGAKLILLPEIWNSPYSHDS--FPVYAEDIDAGGDASPST 150 (364)
Q Consensus 80 ~~~~kIA~vQ~~v-----~~d~~~n~~~i~~~i~~A~~--~gadLvVfPE~~l~gy~~~~--~~~~~~~~~~~~~~~~~~ 150 (364)
..+||||++|+++ .+|++.|++++.+++++|++ .|+|||||||++++||.+.. +..+++. ..++.+
T Consensus 10 ~~~~kValvQ~~i~~~~~~~d~~~Nl~~i~~~i~~A~~~~~gadLVVfPE~~l~G~~~~~~~~~~~a~~-----~~~~~~ 84 (341)
T 2uxy_A 10 NDTVGVAVVNYKMPRLHTAAEVLDNARKIAEMIVGMKQGLPGMDLVVFPEYSLQGIMYDPAEMMETAVA-----IPGEET 84 (341)
T ss_dssp TTEEEEEEECCBCCBCCSHHHHHHHHHHHHHHHHHHHHHCTTEEEEECCTTTTTBCCCSHHHHHHHCBC-----SSSHHH
T ss_pred CCccEEEEEECCcccCCCccCHHHHHHHHHHHHHHHHhcCCCCcEEEeCCCcccccCCCHHHHHHHhcc-----CCCHHH
Confidence 3569999999984 26899999999999999988 79999999999999986432 2222222 135799
Q ss_pred HHHHHHHHHcCcEEEEeeee-eecC----CeeEEEEEEEcCCCcEEEEeeccccCCCCCCCcccccccccccCCCCCeEE
Q 017888 151 AMLSEVARLLKITIVGGSIP-ERSG----DRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPTIV 225 (364)
Q Consensus 151 ~~l~~lA~~~~i~Iv~Gs~~-~~~~----~~~yNsa~vi~~~G~i~~~y~K~~L~~~~~P~~~~~~E~~~~~~G~~~~vf 225 (364)
+.|+++|+++++++++| ++ ++.+ +++||++++|+++|+++++|+|+|||. |..+|.+|+...+|
T Consensus 85 ~~l~~~a~~~~i~iv~G-~~ge~~~~~~~~~~yNsa~vi~p~G~i~~~Y~K~hlf~----------e~~~f~pG~~~~v~ 153 (341)
T 2uxy_A 85 EIFSRACRKANVWGVFS-LTGERHEEHPRKAPYNTLVLIDNNGEIVQKYRKIIPWC----------PIEGWYPGGQTYVS 153 (341)
T ss_dssp HHHHHHHHHHTCEEEEE-EEEECCTTTTSSCCEEEEEEECTTSCEEEEEECSSCCT----------TTCCCBCCCCCCCE
T ss_pred HHHHHHHHHhCcEEEEE-eeeeEcCCCCCCceEEEEEEECCCCcEEEEEEeeccCC----------CccceeCCCCceEE
Confidence 99999999999999999 45 5532 349999999999999999999999853 44678999999999
Q ss_pred ecC-CeeEEEEEeccCcccHHHHHHHhCCceEEEEeCCCCCCCChhHHHHHHHHHHHhcCcEEEEecCCCCCCCCeeeee
Q 017888 226 DTD-VGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDEGAGYVAWG 304 (364)
Q Consensus 226 ~~~-~~rigv~IC~D~~fpe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~g~~~~~~~~~G 304 (364)
+++ +.|+|++||||++|||++|.++.+|||+|++|++|+.. ...+|..++++||+||++||++||++|.. +++.|+|
T Consensus 154 ~~~~G~riG~~ICyD~~fpe~~r~l~~~Gadlll~psa~~~~-~~~~~~~l~~arA~En~~~vv~an~~G~~-~~~~~~G 231 (341)
T 2uxy_A 154 EGPKGMKISLIIXDDGNYPEIWRDCAMKGAELIVRCQGYMYP-AKDQQVMMAKAMAWANNCYVAVANAAGFD-GVYSYFG 231 (341)
T ss_dssp ECGGGCEEEEEEGGGGGSHHHHHHHHHTTCSEEEEEECCBTT-CHHHHHHHHHHHHHHHTCEEEEEECEEEC-SSCEEEC
T ss_pred ECCCCCEEEEEEccCCcCcHHHHHHHHcCCCEEEEcCCCCCC-cHHHHHHHHHHHHHhCCcEEEEECCCCCC-CCceeee
Confidence 994 56999999999999999999999999999999998653 46789999999999999999999998865 4678999
Q ss_pred EeEEECCCCCEeEeCC-CCCcEEEEEEchhhHHHHHhcCCCc
Q 017888 305 HSTLVGPFGEVLATTE-HAEDIIIAEIDYSILELRRTSLPLS 345 (364)
Q Consensus 305 ~S~Ii~p~G~il~~~~-~~e~vl~~~ldl~~~~~~r~~~~~~ 345 (364)
.|+|++|+|+++++++ ++++++++++|++.++..|..+|..
T Consensus 232 ~S~Iidp~G~vla~~~~~~e~il~a~id~~~~~~~R~~~~~~ 273 (341)
T 2uxy_A 232 HSAIIGFDGRTLGECGEEEMGIQYAQLSLSQIRDARANDQSQ 273 (341)
T ss_dssp CCEEECTTSCEEEECCSCTTCEEEEEEEHHHHHHHHHHCCTT
T ss_pred EEEEECCCCCEEEECCCCCCEEEEEEEcHHHHHHHHhhcchh
Confidence 9999999999999986 6899999999999999999988873
No 12
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=7.3e-45 Score=375.90 Aligned_cols=251 Identities=21% Similarity=0.261 Sum_probs=204.0
Q ss_pred CCceEEEEEecccc-cCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHH
Q 017888 80 VAKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVAR 158 (364)
Q Consensus 80 ~~~~kIA~vQ~~v~-~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~ 158 (364)
|+.||||++|+++. +|++.|++++.+++++|+++|||||||||++++||.+.++.. .+.+. +++.+.+.++|+
T Consensus 3 M~~~rVA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvVfPEl~ltGY~~~dl~~-~~~~~-----~~~~~~l~~la~ 76 (634)
T 3ilv_A 3 LSTIRIGGAAVNQTPIDWENNVKNILDAIEEAKNANVEILCLPELCITGYGCEDLFL-TDWVA-----ETAIEYCFEIAA 76 (634)
T ss_dssp -CEEEEEEEEECCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCGGGGG-SHHHH-----HHHHHHHHHHHT
T ss_pred CCCeEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCcEEEcCCCccccCChHHHhh-Chhhh-----HHHHHHHHHHHH
Confidence 45799999999987 899999999999999999999999999999999998876532 22211 357889999999
Q ss_pred Hc-CcEEEEeeeeeecCCeeEEEEEEEcCCCcEEEEeeccccCCCCCCCcccccccccccCCCCC---------------
Q 017888 159 LL-KITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETP--------------- 222 (364)
Q Consensus 159 ~~-~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~i~~~y~K~~L~~~~~P~~~~~~E~~~~~~G~~~--------------- 222 (364)
++ +++|++| ++++.++++||+++++ ++|++++.|+|+||+++ ..|.|.++|++|+..
T Consensus 77 ~~~~i~ivvG-~p~~~~~~lyNsa~vi-~~G~il~~y~K~hL~~~-----~~f~E~r~f~pG~~~~~~~~~~~g~~~p~g 149 (634)
T 3ilv_A 77 SCTDITVSLG-LPMRIAGITYNCVCLV-ENGIVKGFSAKQFLANE-----GVHYETRWFTAWPRNHTTTFLYNDVKYPFG 149 (634)
T ss_dssp TCTTSEEEEE-EEEEETTEEEEEEEEE-ETTEEEEEEECSSCCCS-----TTCCGGGTCCCCCTTCEEEEEETTEEEEEE
T ss_pred hCCCCEEEEe-eeEeeCCCccEEEEEE-ECCeEEEEEcCEeCCCC-----CCcChhhhcCCCCccccceecccCcccccC
Confidence 86 9999999 7888889999999999 79999999999999654 378899999999875
Q ss_pred -eEEecCCeeEEEEEeccCcccH-HHHHHHhCCceEEEEeCCCCCCCCh-hHHHHHHHHHHHhcCcEEEEecCCCCCCCC
Q 017888 223 -TIVDTDVGRIGIGICYDIRFQE-LAMIYGARGAHLICYPGAFNMTTGP-LHWELLQRARATDNQLYVATCSPARDEGAG 299 (364)
Q Consensus 223 -~vf~~~~~rigv~IC~D~~fpe-~~r~~~~~Gadlil~ps~~~~~~~~-~~~~~~~~~rA~en~~~vv~~n~~g~~~~~ 299 (364)
.+|+++++|||+.||||+|||+ +.+.++.+|||+|++|++|++..++ .+|..+.++||+||+++++++|.+|..+++
T Consensus 150 ~~vf~~~g~~iG~~IC~D~~fPe~~~r~la~~GAdii~~psas~~~~gk~~~~~~l~~~rA~e~~~~vv~aN~~G~~~~~ 229 (634)
T 3ilv_A 150 DVLYNVKDARIGFEICEDAWRTDRVGIRHYEKGATLVLNPSASHFAFGKSAIRYDLVIGGSERFDCTYVYANLLGNEAGR 229 (634)
T ss_dssp SCCEEETTEEEEECCTTC----------CGGGTCSEEEEEECCBCCTTHHHHHHHHHHHHHHHTTSEEEEEECEEESSSS
T ss_pred CeEEEECCEEEEEEEeccccCChHHHHHHHHCCCcEEEEecCCccccCcHHHHHHHHHHHHHHhCCEEEEEcCccCCCCc
Confidence 6899999999999999999998 9999999999999999999887665 578899999999999999999999887678
Q ss_pred eeeeeEeEEECCCCCEeEeCC----CCCcEEEEEEchhhHHHHHhcCCC
Q 017888 300 YVAWGHSTLVGPFGEVLATTE----HAEDIIIAEIDYSILELRRTSLPL 344 (364)
Q Consensus 300 ~~~~G~S~Ii~p~G~il~~~~----~~e~vl~~~ldl~~~~~~r~~~~~ 344 (364)
..|+|+|+|. |+|+++++++ .+++++++++|++.++..|..++.
T Consensus 230 ~~f~G~S~I~-p~G~vla~~~~f~~~~~~vi~a~iDl~~~~~~R~~~~~ 277 (634)
T 3ilv_A 230 MIYDGEVLIA-HKGKLIQRNDRLSFKNVNLIYADIATDSAETPETVLTQ 277 (634)
T ss_dssp CEEECCEEEE-ETTEEEEECCSSCSSSEEEEEEEEEC------------
T ss_pred eEEcceEEEE-cCCeEEEECCCCCCCCceEEEEEEEhHHhHHHHhcCCC
Confidence 9999999877 9999999986 246899999999999888877643
No 13
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=100.00 E-value=4.5e-44 Score=365.04 Aligned_cols=239 Identities=24% Similarity=0.314 Sum_probs=207.6
Q ss_pred ceEEEEEecccc-cCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHH--
Q 017888 82 KFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVAR-- 158 (364)
Q Consensus 82 ~~kIA~vQ~~v~-~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~-- 158 (364)
+||||++|+++. +|++.|++++.+++++|+++|||||||||++++||.+.++......+. ...+.+.++++
T Consensus 6 kmKIAlaQln~~vGD~~~N~~~i~~~i~~Aa~~GAdLvvfPEL~ltGY~~~Dl~~~~~~~~------~~~~~l~~la~~~ 79 (565)
T 4f4h_A 6 KTRIALAQLNVTVGDFAGNVAKIVAAAQAAHDAGAHFLIAPELALSGYPPEDLLLRPAFYA------ASDAALAELAAQL 79 (565)
T ss_dssp CEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCSCCGGGGGCHHHHH------HHHHHHHHHHHHH
T ss_pred ceEEEEEECCCCcccHHHHHHHHHHHHHHHHHCCCcEEECCCCcccCCChHHhhhCHHHHH------HHHHHHHHHHHHh
Confidence 499999999987 999999999999999999999999999999999999877533222211 23334444443
Q ss_pred --HcCcEEEEeeeeeec----------------CCeeEEEEEEEcCCCcEEEEeeccccCCCCCCCcccccccccccCCC
Q 017888 159 --LLKITIVGGSIPERS----------------GDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGE 220 (364)
Q Consensus 159 --~~~i~Iv~Gs~~~~~----------------~~~~yNsa~vi~~~G~i~~~y~K~~L~~~~~P~~~~~~E~~~~~~G~ 220 (364)
..+++|++| ++.+. ++++||+++++. +|++++.|+|+|| |++..|+|+++|.+|+
T Consensus 80 ~~~~~i~ivvG-~p~~~~~~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~hL-----p~~~~f~E~r~f~~G~ 152 (565)
T 4f4h_A 80 KPFAGLAVLVG-HPLRAPSADGNANRAIERGVPPVDTYNAASLIV-GGEVAGTYRKQDL-----PNTEVFDEKRYFATDA 152 (565)
T ss_dssp TTSTTCEEEEE-EEEECC-----CCCCCCTTSCCCSEEEEEEEEE-TTEEEEEEECCSC-----CCSTTCCGGGTCCCCC
T ss_pred hhcCCcEEEEe-eeeeecccccccccceecccCCCceEEEEEEEE-CCEEEEEEeeeec-----CCCcccceeccccCCC
Confidence 358999999 56543 235999999997 7999999999998 5666899999999999
Q ss_pred CCeEEecCCeeEEEEEeccCcccHHHHHHHhCCceEEEEeCCCCCCCCh-hHHHHHHHHHHHhcCcEEEEecCCCCCCCC
Q 017888 221 TPTIVDTDVGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGP-LHWELLQRARATDNQLYVATCSPARDEGAG 299 (364)
Q Consensus 221 ~~~vf~~~~~rigv~IC~D~~fpe~~r~~~~~Gadlil~ps~~~~~~~~-~~~~~~~~~rA~en~~~vv~~n~~g~~~~~ 299 (364)
...+|+++++|||+.||||+||||+.+.++.+||++|++|+++++..++ .+|..+.++||+||+++++++|.+|+. ++
T Consensus 153 ~~~v~~~~g~~iGv~IC~Dlwfpe~~r~la~~GA~ii~~psAs~~~~gk~~~r~~ll~arA~e~~~~vvy~N~vG~~-~~ 231 (565)
T 4f4h_A 153 APYVFELNGVKFGVVICEDVWHASAAQLAKAAGAQVLIVPNGSPYHMNKDAVRIDILRARIRETGLPMVYVNLVGGQ-DE 231 (565)
T ss_dssp CCCEEEETTEEEEECCGGGGGSSHHHHHHHHTTCSEEEEEECCBCCTTHHHHHHHHHHHHHHHHCCCEEEEECEEEE-TT
T ss_pred cceeEEecCcEEEEEEeehhcccchhHHHHhCCCeeeecccccccccCcHHHHHHHHHHHHHHhCCcEEEeeeecCC-CC
Confidence 9999999999999999999999999999999999999999999988776 578889999999999999999998875 57
Q ss_pred eeeeeEeEEECCCCCEeEeCC-CCCcEEEEEEchhh
Q 017888 300 YVAWGHSTLVGPFGEVLATTE-HAEDIIIAEIDYSI 334 (364)
Q Consensus 300 ~~~~G~S~Ii~p~G~il~~~~-~~e~vl~~~ldl~~ 334 (364)
.+|+|+|+|++|+|+++++++ ++|+++++++|...
T Consensus 232 ~~f~G~S~iidp~G~vla~~~~f~e~~~~~d~d~~~ 267 (565)
T 4f4h_A 232 LVFDGGSFVLDGAGELVAKMPQFEEGNAIVEFDGAR 267 (565)
T ss_dssp EEEEBCCEEECTTSCEEEECCBSCCEEEEEEEETTE
T ss_pred eEEECCcceecCCCcEEEEccccccceEEEEecccc
Confidence 899999999999999999996 89999999998653
No 14
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=100.00 E-value=2.3e-44 Score=370.04 Aligned_cols=242 Identities=24% Similarity=0.266 Sum_probs=214.8
Q ss_pred CceEEEEEecccc-cCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHH
Q 017888 81 AKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARL 159 (364)
Q Consensus 81 ~~~kIA~vQ~~v~-~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~ 159 (364)
.+||||++|+++. +|++.|++++.+++++|+++|||||||||++++||.+.++....+.. .++.+.+.++|++
T Consensus 3 ~~~rvA~~Q~~~~~~d~~~N~~~i~~~i~~A~~~gadLvvfPEl~ltGy~~~dl~~~~~~~------~~~~~~l~~la~~ 76 (590)
T 3n05_A 3 LQLRLALNQIDSTVGDIAGNAEAILRWTRHSAEQGAHLVAFPEMALTGYPVEDLALRSSFV------EASRTALRELAAR 76 (590)
T ss_dssp EEEEEEEEECCCCTTCHHHHHHHHHHHHHHHHTTTCSEEECCTTTTTCSCCGGGGGCHHHH------HHHHHHHHHHHHH
T ss_pred CccEEEEEeCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCcccccCCChHHHhhCHHHH------HHHHHHHHHHHHh
Confidence 4699999999987 99999999999999999999999999999999999987654333322 2578889999998
Q ss_pred c--C----cEEEEeeeeeec-C---------CeeEEEEEEEcCCCcEEEEeeccccCCCCCCCcccccccccccCCCCCe
Q 017888 160 L--K----ITIVGGSIPERS-G---------DRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPT 223 (364)
Q Consensus 160 ~--~----i~Iv~Gs~~~~~-~---------~~~yNsa~vi~~~G~i~~~y~K~~L~~~~~P~~~~~~E~~~~~~G~~~~ 223 (364)
+ + ++|++|+ +++. + +++||++++|+ +|++++.|+|+||+++ ..|.|.++|++|++..
T Consensus 77 ~~~~~~~~i~ivvG~-~~~~~~~~~~~~~~~~~lyNsa~vi~-~G~i~~~y~K~~L~~~-----~~f~E~r~f~~G~~~~ 149 (590)
T 3n05_A 77 LAEEGFGELPVLVGY-LDRSESAQPKYGQPAGAPRNAAAVLH-RGRVALTFAKHHLPNY-----GVFDEFRYFVPGDTMP 149 (590)
T ss_dssp HHHTTCTTSCEEEEE-EEECSSCBTTTTBCTTCEEEEEEEEE-TTEEEEEEECCCCCSS-----SSCCHHHHCCCCCEEE
T ss_pred hhhccCCceEEEEee-EEEEcCcccccccccCCeeEEEEEEe-CCEEEEEEeCccCCCC-----CccCccccccCCCcce
Confidence 8 6 9999994 5543 2 37999999998 9999999999999654 3788999999999999
Q ss_pred EEecCCeeEEEEEeccCcc-cHHHHHHHhCCceEEEEeCCCCCCCCh-hHHHHHHHHHHHhcCcEEEEecCCCCCCCCee
Q 017888 224 IVDTDVGRIGIGICYDIRF-QELAMIYGARGAHLICYPGAFNMTTGP-LHWELLQRARATDNQLYVATCSPARDEGAGYV 301 (364)
Q Consensus 224 vf~~~~~rigv~IC~D~~f-pe~~r~~~~~Gadlil~ps~~~~~~~~-~~~~~~~~~rA~en~~~vv~~n~~g~~~~~~~ 301 (364)
+|+++++|||+.||||+|| |++.+.++.+|||+|++|++|++..+. .+|..++++||+||++|+++||.+|+. +++.
T Consensus 150 v~~~~g~~iG~~IC~D~~f~pe~~~~la~~Ga~ii~~psa~p~~~gk~~~~~~l~~~rA~e~~~~vv~an~~G~~-~~~~ 228 (590)
T 3n05_A 150 IVRLHGVDIALAICEDLWQDGGRVPAARSAGAGLLLSVNASPYERDKDDTRLELVRKRAQEAGCTTAYLAMIGGQ-DELV 228 (590)
T ss_dssp EEEETTEEEEEEEGGGGGSTTSHHHHHHHTTCSEEEEEECCBCCCCSSCHHHHHHHHHHHHHTSEEEEEECEEEE-TTEE
T ss_pred EEEECCEEEEEEeehhhccCChHHHHHHHcCCCEEEEecCCccccCcHHHHHHHHHHHHHHhCCEEEEEecccCC-CCeE
Confidence 9999999999999999999 999999999999999999999887654 578899999999999999999998864 5789
Q ss_pred eeeEeEEECCCCCEeEeCC-CCCcEEEEEEchhhHH
Q 017888 302 AWGHSTLVGPFGEVLATTE-HAEDIIIAEIDYSILE 336 (364)
Q Consensus 302 ~~G~S~Ii~p~G~il~~~~-~~e~vl~~~ldl~~~~ 336 (364)
|+|+|+|++|+|+++++++ ++++++++++|++.++
T Consensus 229 f~G~S~iidp~G~vla~~~~~~e~~~~~didl~~~~ 264 (590)
T 3n05_A 229 FDGDSIVVDRDGEVVARAPQFSEGCVVLDLDLPAAE 264 (590)
T ss_dssp EEBCCEEECTTSCEEEECCBTSCEEEEEEEEECCCC
T ss_pred EeCcEEEECCCCcEEEEcCCCCCcEEEEEEcccccc
Confidence 9999999999999999986 7999999999988763
No 15
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=100.00 E-value=1.9e-43 Score=367.27 Aligned_cols=260 Identities=20% Similarity=0.221 Sum_probs=221.3
Q ss_pred CCCceEEEEEecccc-cCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHH
Q 017888 79 PVAKFKVGLCQLSVT-ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVA 157 (364)
Q Consensus 79 ~~~~~kIA~vQ~~v~-~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA 157 (364)
.++.||||++|+++. +|++.|++++.+++++|+++|||||||||++++||.+.++....+.++. ..+.++.|.++|
T Consensus 9 ~~g~~rVAl~Q~~~~~~D~~~N~~~i~~~i~~A~~~gadLvVfPEl~ltGY~~~dl~~~~~~~~~---~~~~l~~l~~~a 85 (680)
T 3sdb_A 9 QHGFVRVAACTHHTTIGDPAANAASVLDMARACHDDGAALAVFPELTLSGYSIEDVLLQDSLLDA---VEDALLDLVTES 85 (680)
T ss_dssp GGTEEEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCSEEECCTTTTTCGGGGGGGGCHHHHHH---HHHHHHHHHHHH
T ss_pred hCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEcCCCcccCCChHHHhhCHHHHHh---hHHHHHHHHHHh
Confidence 346799999999987 9999999999999999999999999999999999988665332222111 136888999999
Q ss_pred HHcCcEEEEeeeeeecCCeeEEEEEEEcCCCcEEEEeeccccCCCCCCCcccccccccccCCCCCe--------------
Q 017888 158 RLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRKIHLFDIDIPGKITFIESKSLTAGETPT-------------- 223 (364)
Q Consensus 158 ~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~i~~~y~K~~L~~~~~P~~~~~~E~~~~~~G~~~~-------------- 223 (364)
++++++|++| ++++.++++||++++++ +|++++.|+|+||+++ ..|.|.++|++|+...
T Consensus 86 ~~~~i~ivvG-~p~~~~~~lyNsa~vi~-~G~il~~y~K~hL~~~-----~~f~E~r~F~~G~~~~~~i~~~g~~vpfg~ 158 (680)
T 3sdb_A 86 ADLLPVLVVG-APLRHRHRIYNTAVVIH-RGAVLGVVPKSYLPTY-----REFYERRQMAPGDGERGTIRIGGADVAFGT 158 (680)
T ss_dssp TTCSSEEEEE-EEEEETTEEEEEEEEEE-TTEEEEEEECSCCCEE-----TTEEGGGTEECCTTCCSEEEETTEEEEBSS
T ss_pred hcCCcEEEEe-ceEEeCCCceEEEEEEe-CCCEEEEEeeecCCCC-----CccChhhhcCCCCCCCceeeecCcccccCC
Confidence 9999999999 68888899999999998 9999999999999654 3789999999998752
Q ss_pred --EE---ecCCeeEEEEEeccCcccHHH-HHHHhCCceEEEEeCCCCCCCChhHH-HHHHHHHHHhcCcEEEEecC-CCC
Q 017888 224 --IV---DTDVGRIGIGICYDIRFQELA-MIYGARGAHLICYPGAFNMTTGPLHW-ELLQRARATDNQLYVATCSP-ARD 295 (364)
Q Consensus 224 --vf---~~~~~rigv~IC~D~~fpe~~-r~~~~~Gadlil~ps~~~~~~~~~~~-~~~~~~rA~en~~~vv~~n~-~g~ 295 (364)
+| +++++|||+.||||+|||+.. +.++.+|||+|++|++|+...++.+| ..+.+.++.+.+..++++|+ .|.
T Consensus 159 ~~vf~~~~~~g~riGv~IC~Dl~fPe~~~r~la~~GAdiil~pSasp~~~gk~~~r~~l~~~~aar~~~~yV~a~~~~G~ 238 (680)
T 3sdb_A 159 DLLFAASDLPGFVLHVEIAEDMFVPMPPSAEAALAGATVLANLSGSPITIGRAEDRRLLARSASARCLAAYVYAAAGEGE 238 (680)
T ss_dssp CEEEEETTCTTCEEEEEEGGGGGSSSCHHHHHHHHTCCEEEEECCCCCCTTHHHHHHHHHHHHHHHTTSEEEEECCCTTS
T ss_pred ceeEeeeccCCeEEEEEEeccccccccHHHHHHhcCCeEEEEecCCccccCcHHHHHHHHHHHHHHhCCcEEEEECCccc
Confidence 46 689999999999999999996 88999999999999999887777554 56778887776555555555 554
Q ss_pred CCCCeeeeeEeEEECCCCCEeEeCC-C--CCcEEEEEEchhhHHHHHhcCCCccccc
Q 017888 296 EGAGYVAWGHSTLVGPFGEVLATTE-H--AEDIIIAEIDYSILELRRTSLPLSKQRR 349 (364)
Q Consensus 296 ~~~~~~~~G~S~Ii~p~G~il~~~~-~--~e~vl~~~ldl~~~~~~r~~~~~~~~~r 349 (364)
..+++.|+|+|+|+ |+|+++++++ + +++++++++|++.++..|.++|++.++|
T Consensus 239 ~~~~l~f~G~S~I~-p~G~vla~~~~f~~~e~ll~adiDl~~l~~~R~~~~~~~~~~ 294 (680)
T 3sdb_A 239 STTDLAWDGQTMIW-ENGALLAESERFPKGVRRSVADVDTELLRSERLRMGTFDDNR 294 (680)
T ss_dssp CCSSCCCCCCEEEE-ETTEEEEECCSSCSSCEEEEEEEEHHHHHHHHHHCHHHHHHH
T ss_pred CCCCeEEeccEEEE-cCCEEEEECCCCCCCCcEEEEEEcHHHHHHHHHhCCchhhhh
Confidence 45788999999999 9999999986 4 9999999999999999999999888776
No 16
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=80.20 E-value=6.7 Score=35.37 Aligned_cols=73 Identities=25% Similarity=0.254 Sum_probs=44.8
Q ss_pred HHHHHHHhCCceEEEEeCCCCCCCChh------------HHHHHHHHHHHhcCcEEEEecCCCCCCCCeeeeeEeEEECC
Q 017888 244 ELAMIYGARGAHLICYPGAFNMTTGPL------------HWELLQRARATDNQLYVATCSPARDEGAGYVAWGHSTLVGP 311 (364)
Q Consensus 244 e~~r~~~~~Gadlil~ps~~~~~~~~~------------~~~~~~~~rA~en~~~vv~~n~~g~~~~~~~~~G~S~Ii~p 311 (364)
++.+.++.+|+|+|+.|-.+....... .+....+..|.+++++++....... +++ .++=.+.+++|
T Consensus 44 ~~i~~A~~~gadlvvfPE~~l~gy~~~d~~~~~a~~~~~~~~~~l~~~a~~~~i~iv~G~~~~~-~~~-~~yNs~~~i~~ 121 (283)
T 3hkx_A 44 DAAARASEQGAQLLLTPELFGFGYVPSQICAQVSAEQVDAARSRLRGIARDRGIALVWSLPGPE-GPE-QRGITAELADE 121 (283)
T ss_dssp HHHHHHHHTTCSEEECCTTGGGCSCHHHHHHHCCHHHHHHHHHHHHHHHHHTTSEEEECCBCSS-CTT-TCCBEEEEECT
T ss_pred HHHHHHHHCCCCEEEcCCCcccCCChHHHHHHhccccCCHHHHHHHHHHHHhCCEEEEEEEEEc-CCC-CEEEEEEEEcC
Confidence 344556678999999998643211111 1223456778889999986543221 112 23446788999
Q ss_pred CCCEeEe
Q 017888 312 FGEVLAT 318 (364)
Q Consensus 312 ~G~il~~ 318 (364)
+|+++..
T Consensus 122 ~G~i~~~ 128 (283)
T 3hkx_A 122 HGEVLAS 128 (283)
T ss_dssp TSCEEEE
T ss_pred CCcEEEE
Confidence 9998754
No 17
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=79.54 E-value=5 Score=36.19 Aligned_cols=72 Identities=8% Similarity=-0.005 Sum_probs=43.7
Q ss_pred HHHHHHhCCceEEEEeCCCCCCCCh-----------hHHHHHHHHHHHhcCcEEEEecCCCCCCCCeeeeeEeEEECCCC
Q 017888 245 LAMIYGARGAHLICYPGAFNMTTGP-----------LHWELLQRARATDNQLYVATCSPARDEGAGYVAWGHSTLVGPFG 313 (364)
Q Consensus 245 ~~r~~~~~Gadlil~ps~~~~~~~~-----------~~~~~~~~~rA~en~~~vv~~n~~g~~~~~~~~~G~S~Ii~p~G 313 (364)
+.+.++..|||+|+.|-.+...... ..+....+..|.+++++++........ ++ .++=...+++|+|
T Consensus 45 ~i~~A~~~gadlvvfPE~~l~gy~~~~~~~~a~~~~~~~~~~l~~la~~~~i~iv~G~~~~~~-~~-~~yNs~~~i~~~G 122 (281)
T 3p8k_A 45 WFEKNMNAEVDVVVLPEMWNNGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVAGSVSNIR-NN-QIFNTAFSVNKSG 122 (281)
T ss_dssp HHHHHCCTTCCEEECCSSTTTTTCGGGHHHHSEETTHHHHHHHHHHHHHHTCEEEEEEEEEEE-TT-EEEEEEEEECTTS
T ss_pred HHHHHHhCCCcEEEcCCCccCCCChhHHHHhhhccCcHHHHHHHHHHhhCCeEEEEeeeEEcc-CC-cEEEEEEEEcCCC
Confidence 3444556799999999875331111 123344567788899998764321111 12 2445678889999
Q ss_pred CEeEe
Q 017888 314 EVLAT 318 (364)
Q Consensus 314 ~il~~ 318 (364)
+++..
T Consensus 123 ~i~~~ 127 (281)
T 3p8k_A 123 QLINE 127 (281)
T ss_dssp CEEEE
T ss_pred eEEEE
Confidence 98754
No 18
>2vhh_A CG3027-PA; hydrolase; 2.8A {Drosophila melanogaster} PDB: 2vhi_A
Probab=78.76 E-value=6.9 Score=37.49 Aligned_cols=75 Identities=15% Similarity=0.239 Sum_probs=44.7
Q ss_pred HHHHHHHhCCceEEEEeCCCCCCCC-----------------hhHHHHHHHHHHHhcCcEEEEecCCCCCCCCeeeeeEe
Q 017888 244 ELAMIYGARGAHLICYPGAFNMTTG-----------------PLHWELLQRARATDNQLYVATCSPARDEGAGYVAWGHS 306 (364)
Q Consensus 244 e~~r~~~~~Gadlil~ps~~~~~~~-----------------~~~~~~~~~~rA~en~~~vv~~n~~g~~~~~~~~~G~S 306 (364)
++.+.++..|||||+.|-.+..... ...+....+..|.+++++++..........+-.++=.+
T Consensus 103 ~li~~A~~~gadLVVfPE~~l~gy~~~~~~~~~~~~~ae~~~~~~~~~~l~~lA~~~~i~Iv~G~~e~~~~~~~~~yNsa 182 (405)
T 2vhh_A 103 TMIKAAAEAGCNIVCTQEAWTMPFAFCTREKFPWCEFAEEAENGPTTKMLAELAKAYNMVIIHSILERDMEHGETIWNTA 182 (405)
T ss_dssp HHHHHHHHTTCSEEECCTTTTSCSCC---------CCCBCTTTSHHHHHHHHHHHHTTCEEEEEEEEEETTTTTEEEEEE
T ss_pred HHHHHHHHCCCCEEEcCCcccccccccccchhhHHHHHhhccCCHHHHHHHHHHHHCCEEEEEeceecccCCCCcEEEEE
Confidence 4555566789999999987532110 01223345667889999988643211111012245567
Q ss_pred EEECCCCCEeEe
Q 017888 307 TLVGPFGEVLAT 318 (364)
Q Consensus 307 ~Ii~p~G~il~~ 318 (364)
.+++|+|+++..
T Consensus 183 ~vi~p~G~i~~~ 194 (405)
T 2vhh_A 183 VVISNSGRYLGK 194 (405)
T ss_dssp EEECTTSCEEEE
T ss_pred EEECCCCeEEEE
Confidence 789999998754
No 19
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=76.37 E-value=6.3 Score=34.99 Aligned_cols=66 Identities=17% Similarity=0.158 Sum_probs=41.5
Q ss_pred HHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHHcCcEEEEeeeeeecCCe-eEEEEEEEcC
Q 017888 108 EEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDR-LYNTCCVFGS 186 (364)
Q Consensus 108 ~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~-~yNsa~vi~~ 186 (364)
+..+.+|+|+|+.|=.+... . ....++..|.+++++++.-+..-.+++. .+=.+.+++|
T Consensus 156 r~~~~~ga~li~~ps~~~~~--------~------------~~~~~~~rA~en~~~vv~~n~~G~~~~~~~~G~S~ii~p 215 (262)
T 3ivz_A 156 RTLALKGADVIAHPANLVMP--------Y------------APRAMPIRALENKVYTVTADRVGEERGLKFIGKSLIASP 215 (262)
T ss_dssp HHHHHTTCSEEEEEECCCSS--------C------------HHHHHHHHHHHHTCEEEEEECCSEETTEECCCCCEEECT
T ss_pred HHHHHCCCCEEEEcCCCCch--------H------------HHHHHHHHHHhcCcEEEEECCCCcCCCceEeeeEEEECC
Confidence 34567899999999774321 0 2334566788899998865322222222 2234678899
Q ss_pred CCcEEEE
Q 017888 187 DGKLIAK 193 (364)
Q Consensus 187 ~G~i~~~ 193 (364)
+|+++..
T Consensus 216 ~G~il~~ 222 (262)
T 3ivz_A 216 KAEVLSM 222 (262)
T ss_dssp TSCEEEE
T ss_pred CCCEeec
Confidence 9998754
No 20
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=75.64 E-value=8.6 Score=34.59 Aligned_cols=73 Identities=10% Similarity=0.089 Sum_probs=43.6
Q ss_pred HHHHH--HhCCceEEEEeCCCCCCCCh---------------hHHHHHHHHHHHhcCcEEEEecCCCCCC-CCeeeeeEe
Q 017888 245 LAMIY--GARGAHLICYPGAFNMTTGP---------------LHWELLQRARATDNQLYVATCSPARDEG-AGYVAWGHS 306 (364)
Q Consensus 245 ~~r~~--~~~Gadlil~ps~~~~~~~~---------------~~~~~~~~~rA~en~~~vv~~n~~g~~~-~~~~~~G~S 306 (364)
+.+.+ +..|+|+|+.|-.+...... ..+....+..|.+++++++........+ ++ .++=..
T Consensus 35 ~i~~a~~~~~gadlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G~~~~~~~~~~-~~yNs~ 113 (291)
T 1f89_A 35 FIERAMKEQPDTKLVVLPECFNSPYSTDQFRKYSEVINPKEPSTSVQFLSNLANKFKIILVGGTIPELDPKTD-KIYNTS 113 (291)
T ss_dssp HHHHHHHHCTTEEEEECCTTTTSCSCHHHHHHHTTBCCSSSCCHHHHHHHHHHHHSSCEEECCCEEEECTTTC-CEEEEE
T ss_pred HHHHHhhccCCCeEEEcCCCcccCCChHHHHHHhhhhccCCCChHHHHHHHHHHHcCcEEEeceeecccCCCC-ceEEEE
Confidence 44455 66899999999875421111 1233445667888999987532111111 12 244567
Q ss_pred EEECCCCCEeEe
Q 017888 307 TLVGPFGEVLAT 318 (364)
Q Consensus 307 ~Ii~p~G~il~~ 318 (364)
.+++|+|+++..
T Consensus 114 ~~i~~~G~i~~~ 125 (291)
T 1f89_A 114 IIFNEDGKLIDK 125 (291)
T ss_dssp EEECTTSCEEEE
T ss_pred EEECCCCcEEeE
Confidence 788999998764
No 21
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=72.98 E-value=14 Score=34.23 Aligned_cols=67 Identities=18% Similarity=0.290 Sum_probs=39.9
Q ss_pred CCceEEEEeCCCCCC--CC-----------hhHHHHHHHHHHHhcCcEEEEecCCCCCCCCeeeeeEeEEECCCCCEeEe
Q 017888 252 RGAHLICYPGAFNMT--TG-----------PLHWELLQRARATDNQLYVATCSPARDEGAGYVAWGHSTLVGPFGEVLAT 318 (364)
Q Consensus 252 ~Gadlil~ps~~~~~--~~-----------~~~~~~~~~~rA~en~~~vv~~n~~g~~~~~~~~~G~S~Ii~p~G~il~~ 318 (364)
.|+|||+.|-.+... .. ...+....+..|.+++++++........+++...+=...+++|+|+++..
T Consensus 51 ~gadLVVfPE~~l~G~~~~~~~~~~~a~~~~~~~~~~l~~~a~~~~i~iv~G~~e~~~~~~~~~yNsa~vi~p~G~i~~~ 130 (334)
T 2dyu_A 51 PGVELIIFPEYSTQGLNTAKWLSEEFLLDVPGKETELYAKACKEAKVYGVFSIMERNPDSNKNPYNTAIIIDPQGEIILK 130 (334)
T ss_dssp TTEEEEECCTTTTTCCCTTTTTSGGGCBCSSSHHHHHHHHHHHHHTCEEEEEEEECCSSTTSCCEEEEEEECTTSCEEEE
T ss_pred CCCcEEEcCCCccccCCCChhHHHHhhccCCCHHHHHHHHHHHHhCeEEEEeeEEECCCCCceeEEEEEEECCCCCEEEE
Confidence 699999999864321 00 01233445667888899987643321111111134557788999998764
No 22
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1
Probab=72.52 E-value=14 Score=35.51 Aligned_cols=74 Identities=11% Similarity=0.174 Sum_probs=44.5
Q ss_pred HHHHHHhCCceEEEEeCCCCCCCC-hh-----------HHHHHHHHHHHhcCcEEEEecCC--CCCCCCeeeeeEeEEEC
Q 017888 245 LAMIYGARGAHLICYPGAFNMTTG-PL-----------HWELLQRARATDNQLYVATCSPA--RDEGAGYVAWGHSTLVG 310 (364)
Q Consensus 245 ~~r~~~~~Gadlil~ps~~~~~~~-~~-----------~~~~~~~~rA~en~~~vv~~n~~--g~~~~~~~~~G~S~Ii~ 310 (364)
+.+.++.+|||+|+.|-.+..... .. .+....+..|.+++++++..... .. ..+-.++=...+++
T Consensus 38 li~~A~~~gadlvv~PE~~~~~~~~~~~~~~~a~~~~~~~~~~l~~~A~~~~i~iv~G~~~~~e~-~~~~~~yNs~~~i~ 116 (440)
T 1ems_A 38 MIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMATDCEYMEKYRELARKHNIWLSLGGLHHKDP-SDAAHPWNTHLIID 116 (440)
T ss_dssp HHHHHHHTTCSEEEECTTCSCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEET-TEEEEEEEEEEEEC
T ss_pred HHHHHHHCCCCEEECCCcccccCcchhHHHHhhccCCCHHHHHHHHHHHHcCeEEEecccccccc-CCCCcEEEEEEEEC
Confidence 445566789999999997643211 11 12223456788899998765321 11 11122445667889
Q ss_pred CCCCEeEeC
Q 017888 311 PFGEVLATT 319 (364)
Q Consensus 311 p~G~il~~~ 319 (364)
|+|+++..-
T Consensus 117 ~~G~i~~~y 125 (440)
T 1ems_A 117 SDGVTRAEY 125 (440)
T ss_dssp TTSCEEEEE
T ss_pred CCCcEEEEE
Confidence 999987653
No 23
>2uxy_A Aliphatic amidase; nitrilase superfamily, hydrolase, acyl transfer, thiol enzymes, hydroxamic acid; HET: C3Y; 1.25A {Pseudomonas aeruginosa} PDB: 2plq_A
Probab=69.78 E-value=12 Score=34.65 Aligned_cols=70 Identities=19% Similarity=0.276 Sum_probs=43.0
Q ss_pred HHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHHcCcEEEEeeeeeecCC-eeEEEEEEEc
Q 017888 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGD-RLYNTCCVFG 185 (364)
Q Consensus 107 i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~-~~yNsa~vi~ 185 (364)
.+.++.+||||||.|-.|. + .. . ......++..|.+++++++.-+..-.+++ ..+=.+.+++
T Consensus 175 ~r~l~~~Gadlll~psa~~--~--~~----~---------~~~~~l~~arA~En~~~vv~an~~G~~~~~~~~G~S~Iid 237 (341)
T 2uxy_A 175 WRDCAMKGAELIVRCQGYM--Y--PA----K---------DQQVMMAKAMAWANNCYVAVANAAGFDGVYSYFGHSAIIG 237 (341)
T ss_dssp HHHHHHTTCSEEEEEECCB--T--TC----H---------HHHHHHHHHHHHHHTCEEEEEECEEECSSCEEECCCEEEC
T ss_pred HHHHHHcCCCEEEEcCCCC--C--Cc----H---------HHHHHHHHHHHHhCCcEEEEECCCCCCCCceeeeEEEEEC
Confidence 3445678999999986542 1 00 0 12444567778899999886533222222 2333567789
Q ss_pred CCCcEEEE
Q 017888 186 SDGKLIAK 193 (364)
Q Consensus 186 ~~G~i~~~ 193 (364)
|+|+++..
T Consensus 238 p~G~vla~ 245 (341)
T 2uxy_A 238 FDGRTLGE 245 (341)
T ss_dssp TTSCEEEE
T ss_pred CCCCEEEE
Confidence 99998753
No 24
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=69.03 E-value=11 Score=33.67 Aligned_cols=72 Identities=22% Similarity=0.336 Sum_probs=42.8
Q ss_pred HHHHHHhCCceEEEEeCCCCCC--CCh---------hHHHHHHHHHHHhcCcEEEEecCCCCCCCCeeeeeEeEEECCCC
Q 017888 245 LAMIYGARGAHLICYPGAFNMT--TGP---------LHWELLQRARATDNQLYVATCSPARDEGAGYVAWGHSTLVGPFG 313 (364)
Q Consensus 245 ~~r~~~~~Gadlil~ps~~~~~--~~~---------~~~~~~~~~rA~en~~~vv~~n~~g~~~~~~~~~G~S~Ii~p~G 313 (364)
+.+.++..|+|+|+.|-.+... ... ..+....+..|.+++++++........ ++ ..+=.+.+++|+|
T Consensus 27 ~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G~~~~~~-~~-~~yNs~~~i~~~G 104 (276)
T 2w1v_A 27 LVREAAKQGANIVSLPECFNSPYGTTYFPDYAEKIPGESTQKLSEVAKESSIYLIGGSIPEED-AG-KLYNTCSVFGPDG 104 (276)
T ss_dssp HHHHHHHTTCSEEECCTTTTSCCSTTTHHHHCBCSSSHHHHHHHHHHHHHTSEEECCCEEEEE-TT-EEEEEEEEECTTS
T ss_pred HHHHHHHCCCCEEEcCCCcccCCCHHHHHHHhccCCCHHHHHHHHHHHHcCeEEEecceeecC-CC-cEEEEEEEECCCC
Confidence 4445567899999999875321 110 123344566788889998753211100 12 2445667889999
Q ss_pred CEeEe
Q 017888 314 EVLAT 318 (364)
Q Consensus 314 ~il~~ 318 (364)
+++..
T Consensus 105 ~i~~~ 109 (276)
T 2w1v_A 105 SLLVK 109 (276)
T ss_dssp CEEEE
T ss_pred cEEEE
Confidence 98754
No 25
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=67.30 E-value=21 Score=32.32 Aligned_cols=75 Identities=12% Similarity=0.054 Sum_probs=48.7
Q ss_pred ceEEEEEecccc------cCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHH
Q 017888 82 KFKVGLCQLSVT------ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSE 155 (364)
Q Consensus 82 ~~kIA~vQ~~v~------~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~ 155 (364)
.++|..+..... ...+...+.+.+.++.|...|++.|++|-. +. ......+... -+.++.+.+
T Consensus 89 GL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~--~~--~~~~~~~~~~-------~~~l~~l~~ 157 (305)
T 3obe_A 89 GLRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQPSL--PR--IENEDDAKVV-------SEIFNRAGE 157 (305)
T ss_dssp TCEEEEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEECCC--CC--CSSHHHHHHH-------HHHHHHHHH
T ss_pred CCeEEEeeccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEeCCC--CC--CCCHHHHHHH-------HHHHHHHHH
Confidence 367777765431 345677888999999999999999999722 11 0111111111 136677788
Q ss_pred HHHHcCcEEEEe
Q 017888 156 VARLLKITIVGG 167 (364)
Q Consensus 156 lA~~~~i~Iv~G 167 (364)
.|+++|+.+.+=
T Consensus 158 ~a~~~Gv~l~lE 169 (305)
T 3obe_A 158 ITKKAGILWGYH 169 (305)
T ss_dssp HHHTTTCEEEEE
T ss_pred HHHHcCCEEEEe
Confidence 888999988763
No 26
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=67.01 E-value=9.8 Score=34.33 Aligned_cols=75 Identities=16% Similarity=0.095 Sum_probs=43.2
Q ss_pred HHHHHHHhCCceEEEEeCCCCCCC-------C------------hhHHHHHHHHHHHhcCcEEEEecCCCCCCC-Ceeee
Q 017888 244 ELAMIYGARGAHLICYPGAFNMTT-------G------------PLHWELLQRARATDNQLYVATCSPARDEGA-GYVAW 303 (364)
Q Consensus 244 e~~r~~~~~Gadlil~ps~~~~~~-------~------------~~~~~~~~~~rA~en~~~vv~~n~~g~~~~-~~~~~ 303 (364)
++.+.++.+|+|+|+.|-.+.... . ...+....+..|.+++++++........++ +...+
T Consensus 29 ~~i~~a~~~gadlvv~PE~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~G~~~~~~~~~~~~~y 108 (303)
T 1uf5_A 29 DMLTKAASRGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMPGPVVRPLFEKAAELGIGFNLGYAELVVEGGVKRRF 108 (303)
T ss_dssp HHHHHHHHTTCSEEECCTTTTSCCGGGSCCCCHHHHHTTSBSSSSCTTTHHHHHHHHHHTCEEEEEEEEEEEETTEEEEE
T ss_pred HHHHHHHhcCCCEEEeccccccCCCccccccchhhhHHHHhhcCCCHHHHHHHHHHHHhCeEEEEeeeEecCCCCCccee
Confidence 344455678999999998643211 0 001223356678888999876432111011 11244
Q ss_pred eEeEEECCCCCEeEe
Q 017888 304 GHSTLVGPFGEVLAT 318 (364)
Q Consensus 304 G~S~Ii~p~G~il~~ 318 (364)
=...+++|+|+++..
T Consensus 109 Ns~~~i~~~G~i~~~ 123 (303)
T 1uf5_A 109 NTSILVDKSGKIVGK 123 (303)
T ss_dssp EEEEEECTTSCEEEE
T ss_pred eEEEEECCCCCEeee
Confidence 566788999998754
No 27
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=60.93 E-value=29 Score=34.77 Aligned_cols=71 Identities=18% Similarity=0.250 Sum_probs=44.0
Q ss_pred HHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHHcCcEEEEeeeeeecCCeeEE-EEEEEcC
Q 017888 108 EEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYN-TCCVFGS 186 (364)
Q Consensus 108 ~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yN-sa~vi~~ 186 (364)
..++.+|||||+.|=.+. +.... .......++..|.+++++++.-+..-..++..|. .+++++|
T Consensus 174 ~~la~~Ga~ii~~psa~p--~~~gk-------------~~~~~~l~~~rA~e~~~~vv~an~~G~~~~~~f~G~S~iidp 238 (590)
T 3n05_A 174 PAARSAGAGLLLSVNASP--YERDK-------------DDTRLELVRKRAQEAGCTTAYLAMIGGQDELVFDGDSIVVDR 238 (590)
T ss_dssp HHHHHTTCSEEEEEECCB--CCCCS-------------SCHHHHHHHHHHHHHTSEEEEEECEEEETTEEEEBCCEEECT
T ss_pred HHHHHcCCCEEEEecCCc--cccCc-------------HHHHHHHHHHHHHHhCCEEEEEecccCCCCeEEeCcEEEECC
Confidence 344678999999886542 21110 0124455777889999998865333233344443 5677899
Q ss_pred CCcEEEE
Q 017888 187 DGKLIAK 193 (364)
Q Consensus 187 ~G~i~~~ 193 (364)
+|+++..
T Consensus 239 ~G~vla~ 245 (590)
T 3n05_A 239 DGEVVAR 245 (590)
T ss_dssp TSCEEEE
T ss_pred CCcEEEE
Confidence 9998754
No 28
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=58.91 E-value=29 Score=30.41 Aligned_cols=63 Identities=10% Similarity=-0.015 Sum_probs=40.2
Q ss_pred CHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCC-CccchhhhhccCCCCchHHHHHHHHHHHcCcEEEEe
Q 017888 95 DKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHD-SFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (364)
Q Consensus 95 d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~-~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (364)
..+..++.+.+.++.|...|++.|++. +|.... ......+.+ .+.++.+.+.|+++|+.+.+=
T Consensus 87 ~r~~~~~~~~~~i~~A~~lGa~~v~~~----~g~~~~~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~lE 150 (269)
T 3ngf_A 87 REQEFRDNVDIALHYALALDCRTLHAM----SGITEGLDRKACEETF------IENFRYAADKLAPHGITVLVE 150 (269)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEECC----BCBCTTSCHHHHHHHH------HHHHHHHHHHHGGGTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEc----cCCCCCCCHHHHHHHH------HHHHHHHHHHHHHcCCEEEEe
Confidence 356778889999999999999998873 221111 111111111 136677788888999887653
No 29
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=58.79 E-value=31 Score=29.73 Aligned_cols=62 Identities=10% Similarity=-0.054 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCc--cchhhhhccCCCCchHHHHHHHHHHHcCcEEEEe
Q 017888 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSF--PVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (364)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~--~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (364)
.+..++.+.+.++.|...|++.|++. +|...... ....+.. .+.++.+.+.|+++|+.+.+=
T Consensus 80 ~~~~~~~~~~~i~~a~~lG~~~v~~~----~g~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~~E 143 (260)
T 1k77_A 80 EHEAHADIDLALEYALALNCEQVHVM----AGVVPAGEDAERYRAVF------IDNIRYAADRFAPHGKRILVE 143 (260)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEECC----CCBCCTTSCHHHHHHHH------HHHHHHHHHHHGGGTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEC----cCCCCCCCCHHHHHHHH------HHHHHHHHHHHHHcCCEEEEE
Confidence 46778899999999999999999873 23221111 1111111 136677778888899887653
No 30
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=57.43 E-value=24 Score=31.01 Aligned_cols=64 Identities=16% Similarity=0.056 Sum_probs=40.1
Q ss_pred CCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHHcCcEEEEeeeeeecCC--eeEEEEEEEcCCCcE
Q 017888 113 KGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGD--RLYNTCCVFGSDGKL 190 (364)
Q Consensus 113 ~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~--~~yNsa~vi~~~G~i 190 (364)
+|+|+|+.|-.|... ..+ .....++..|.+++++++.-+..-.+++ ..+=.+.+++|+|++
T Consensus 164 ~ga~~i~~~s~w~~~--------~~~---------~~~~~~~~rA~en~~~vv~an~~G~~~~~~~~~G~S~ii~p~G~v 226 (266)
T 2e11_A 164 LDFDLQLFVANWPSA--------RAY---------AWKTLLRARAIENLCFVAAVNRVGVDGNQLHYAGDSAVIDFLGQP 226 (266)
T ss_dssp BSCSEEEEEECCCGG--------GHH---------HHHHHHHHHHHHTTSEEEEEECEEECTTSCEEEEEEEEECTTSCE
T ss_pred CCCcEEEEeCCCCCC--------chH---------HHHHHHHHHHHhcCcEEEEEcCCcCCCCCceEeeeEEEECCCCce
Confidence 399999998764211 001 2344466678899999886533222222 334467889999998
Q ss_pred EEE
Q 017888 191 IAK 193 (364)
Q Consensus 191 ~~~ 193 (364)
+..
T Consensus 227 ~~~ 229 (266)
T 2e11_A 227 QVE 229 (266)
T ss_dssp EEE
T ss_pred eee
Confidence 754
No 31
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=56.53 E-value=28 Score=30.81 Aligned_cols=63 Identities=17% Similarity=0.197 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHHcCcEEEEe
Q 017888 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (364)
Q Consensus 97 ~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (364)
+..++.+.+.++.|...|++.|+++=. ..+.........+.. .+.++.+.+.|+++|+.+.+=
T Consensus 104 ~~~~~~~~~~i~~A~~lG~~~v~~~~~--~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~lE 166 (295)
T 3cqj_A 104 AQGLEIMRKAIQFAQDVGIRVIQLAGY--DVYYQEANNETRRRF------RDGLKESVEMASRAQVTLAME 166 (295)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECCC--SCSSSCCCHHHHHHH------HHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECCC--CCCcCcCHHHHHHHH------HHHHHHHHHHHHHhCCEEEEe
Confidence 466888999999999999999998711 111111111111111 136677778888899987764
No 32
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=56.11 E-value=29 Score=34.73 Aligned_cols=71 Identities=18% Similarity=0.248 Sum_probs=45.5
Q ss_pred HHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHHcCcEEEEeeeeeecCCe-eEEEEEEEcC
Q 017888 108 EEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDR-LYNTCCVFGS 186 (364)
Q Consensus 108 ~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~-~yNsa~vi~~ 186 (364)
+.++.+||+||+.|=.+. +... ..+ .....++..|.+++++++.-+....+++. ++-.+++++|
T Consensus 179 r~la~~GA~ii~~psAs~--~~~g----k~~---------~r~~ll~arA~e~~~~vvy~N~vG~~~~~~f~G~S~iidp 243 (565)
T 4f4h_A 179 QLAKAAGAQVLIVPNGSP--YHMN----KDA---------VRIDILRARIRETGLPMVYVNLVGGQDELVFDGGSFVLDG 243 (565)
T ss_dssp HHHHHTTCSEEEEEECCB--CCTT----HHH---------HHHHHHHHHHHHHCCCEEEEECEEEETTEEEEBCCEEECT
T ss_pred HHHHhCCCeeeecccccc--cccC----cHH---------HHHHHHHHHHHHhCCcEEEeeeecCCCCeEEECCcceecC
Confidence 345678999999996542 1110 001 23445777888999988765333333444 5567889999
Q ss_pred CCcEEEE
Q 017888 187 DGKLIAK 193 (364)
Q Consensus 187 ~G~i~~~ 193 (364)
+|+++..
T Consensus 244 ~G~vla~ 250 (565)
T 4f4h_A 244 AGELVAK 250 (565)
T ss_dssp TSCEEEE
T ss_pred CCcEEEE
Confidence 9998764
No 33
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=47.98 E-value=56 Score=28.23 Aligned_cols=73 Identities=12% Similarity=0.066 Sum_probs=44.0
Q ss_pred ceEEEEEecc--cccCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCC-CCccchhhhhccCCCCchHHHHHHHHHH
Q 017888 82 KFKVGLCQLS--VTADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSH-DSFPVYAEDIDAGGDASPSTAMLSEVAR 158 (364)
Q Consensus 82 ~~kIA~vQ~~--v~~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~-~~~~~~~~~~~~~~~~~~~~~~l~~lA~ 158 (364)
.++|..+... .....++..+.+.+.++.|...|++.|++ .+|+.. ..+.... .+.++.+.+.|+
T Consensus 64 gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~----~~g~~~~~~~~~~~---------~~~l~~l~~~a~ 130 (272)
T 2q02_A 64 GLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARALVL----CPLNDGTIVPPEVT---------VEAIKRLSDLFA 130 (272)
T ss_dssp TCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSEEEE----CCCCSSBCCCHHHH---------HHHHHHHHHHHH
T ss_pred CCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCEEEE----ccCCCchhHHHHHH---------HHHHHHHHHHHH
Confidence 3677665542 22112445678889999999999998875 122211 1111110 135677788888
Q ss_pred HcCcEEEEe
Q 017888 159 LLKITIVGG 167 (364)
Q Consensus 159 ~~~i~Iv~G 167 (364)
++|+.+.+=
T Consensus 131 ~~gv~l~~E 139 (272)
T 2q02_A 131 RYDIQGLVE 139 (272)
T ss_dssp TTTCEEEEC
T ss_pred HcCCEEEEE
Confidence 899887654
No 34
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=44.54 E-value=34 Score=30.07 Aligned_cols=76 Identities=14% Similarity=-0.007 Sum_probs=45.6
Q ss_pred eEEEEEeccc----ccCHHHHHHHHHHHHHHHHHCCCcEEEc-CCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHH
Q 017888 83 FKVGLCQLSV----TADKERNIAHARRAIEEAAEKGAKLILL-PEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVA 157 (364)
Q Consensus 83 ~kIA~vQ~~v----~~d~~~n~~~i~~~i~~A~~~gadLvVf-PE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA 157 (364)
++|..+.... ....+..++.+.+.++.|...|++.|++ |-....+. .....+... -+.++.+.+.|
T Consensus 62 l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~--~~~~~~~~~-------~~~l~~l~~~a 132 (286)
T 3dx5_A 62 LEITMISDYLDISLSADFEKTIEKCEQLAILANWFKTNKIRTFAGQKGSAD--FSQQERQEY-------VNRIRMICELF 132 (286)
T ss_dssp CCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHTCCEEEECSCSSCGGG--SCHHHHHHH-------HHHHHHHHHHH
T ss_pred CeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhCCCEEEEcCCCCCccc--CcHHHHHHH-------HHHHHHHHHHH
Confidence 5555554322 2456778899999999999999999865 32211100 000011111 13667778888
Q ss_pred HHcCcEEEEe
Q 017888 158 RLLKITIVGG 167 (364)
Q Consensus 158 ~~~~i~Iv~G 167 (364)
+++|+.+.+=
T Consensus 133 ~~~Gv~l~lE 142 (286)
T 3dx5_A 133 AQHNMYVLLE 142 (286)
T ss_dssp HHTTCEEEEE
T ss_pred HHhCCEEEEe
Confidence 8999877653
No 35
>4fva_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; HET: EDO; 2.07A {Caenorhabditis elegans}
Probab=44.12 E-value=13 Score=31.56 Aligned_cols=40 Identities=10% Similarity=0.248 Sum_probs=25.0
Q ss_pred ceEEEEEecccc----cCHHHHHHHHHHHHHHHHHCCCcEEEcCCCC
Q 017888 82 KFKVGLCQLSVT----ADKERNIAHARRAIEEAAEKGAKLILLPEIW 124 (364)
Q Consensus 82 ~~kIA~vQ~~v~----~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~ 124 (364)
.+++-++..|+. .+.....+.+.+.| .+.++|||+|.|..
T Consensus 11 ~~~l~v~s~Ni~g~~~~~~~~r~~~i~~~i---~~~~pDIi~LQEv~ 54 (256)
T 4fva_A 11 GFEVSVMSWNIDGLDGRSLLTRMKAVAHIV---KNVNPDILFLQEVV 54 (256)
T ss_dssp TCEEEEEEEECCTTCCTTHHHHHHHHHHHH---HHHCCSEEEEEEEC
T ss_pred CCEEEEEEEecCCCCCcCHHHHHHHHHHHH---HHcCCCEEEEEecC
Confidence 355666667764 23444444444444 46689999999973
No 36
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=43.87 E-value=37 Score=29.41 Aligned_cols=65 Identities=25% Similarity=0.214 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHHcCcEEEEe
Q 017888 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (364)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (364)
.+..++.+.+.++.|...|++.|+++=...+... .+.....+.. -+.++.+.+.|+++|+.+.+=
T Consensus 78 r~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~-~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~lE 142 (275)
T 3qc0_A 78 REKAIDDNRRAVDEAAELGADCLVLVAGGLPGGS-KNIDAARRMV------VEGIAAVLPHARAAGVPLAIE 142 (275)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSCEEEECBCCCTTC-CCHHHHHHHH------HHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEeeCCCCCCC-cCHHHHHHHH------HHHHHHHHHHHHHcCCEEEEe
Confidence 3566788999999999999999887622221100 1111111111 136677788888899887654
No 37
>1iuq_A Glycerol-3-phosphate acyltransferase; open twisted alpha/beta, four helix bundle; 1.55A {Cucurbita moschata} SCOP: c.112.1.1 PDB: 1k30_A
Probab=41.88 E-value=42 Score=31.55 Aligned_cols=65 Identities=6% Similarity=0.042 Sum_probs=41.1
Q ss_pred CHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCC--CCccchhhhhccCCCCchHHHHHHHHHHHcCcE--EEE
Q 017888 95 DKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSH--DSFPVYAEDIDAGGDASPSTAMLSEVARLLKIT--IVG 166 (364)
Q Consensus 95 d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~--~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~--Iv~ 166 (364)
+...|.+.+.+.++...+.|.-++||||..=.--.. ..+ .... ...-..+.+..+|.+.++. |+.
T Consensus 204 ~~r~n~ksl~~~~~~Lk~GG~sI~IFPEGTRsR~~~~~g~l--~~~~-----Fk~gs~~~~~~LA~ksg~P~hIvP 272 (367)
T 1iuq_A 204 KRKANTRSLKEMALLLRGGSQLIWIAPSGGRDRPDPSTGEW--YPAP-----FDASSVDNMRRLIQHSDVPGHLFP 272 (367)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEECTTCSCCCBCTTTCCB--CCCC-----CCHHHHHHHHHHHHTSSSCEEEEE
T ss_pred hhHHHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCCCCCCcc--cccc-----ccchhhhHHHHHHHHcCCCceEEE
Confidence 445677777777777777799999999995331100 011 0011 1224778899999998887 653
No 38
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=41.63 E-value=35 Score=29.69 Aligned_cols=76 Identities=8% Similarity=-0.034 Sum_probs=44.2
Q ss_pred eEEEEEecccc-----cCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHH
Q 017888 83 FKVGLCQLSVT-----ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVA 157 (364)
Q Consensus 83 ~kIA~vQ~~v~-----~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA 157 (364)
++|..+..... .+.++.++.+.+.++.|...|++.|+++ ..++........+... -+.++.+.+.|
T Consensus 61 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~--~~p~~~~~~~~~~~~~-------~~~l~~l~~~a 131 (281)
T 3u0h_A 61 LVLANLGLPLNLYDSEPVFLRELSLLPDRARLCARLGARSVTAF--LWPSMDEEPVRYISQL-------ARRIRQVAVEL 131 (281)
T ss_dssp CEECCEECCSCTTSCHHHHHHHHHTHHHHHHHHHHTTCCEEEEE--CCSEESSCHHHHHHHH-------HHHHHHHHHHH
T ss_pred CceEEecccccccCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEe--ecCCCCCcchhhHHHH-------HHHHHHHHHHH
Confidence 55555544321 2345567788899999999999999853 1111110000111111 13566777778
Q ss_pred HHcCcEEEEe
Q 017888 158 RLLKITIVGG 167 (364)
Q Consensus 158 ~~~~i~Iv~G 167 (364)
+++|+.+.+=
T Consensus 132 ~~~Gv~l~lE 141 (281)
T 3u0h_A 132 LPLGMRVGLE 141 (281)
T ss_dssp GGGTCEEEEE
T ss_pred HHcCCEEEEE
Confidence 8999988764
No 39
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=38.96 E-value=41 Score=29.15 Aligned_cols=76 Identities=14% Similarity=0.113 Sum_probs=46.0
Q ss_pred ceEEEEEeccc--c-cC---HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCc--cchhhhhccCCCCchHHHHH
Q 017888 82 KFKVGLCQLSV--T-AD---KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSF--PVYAEDIDAGGDASPSTAML 153 (364)
Q Consensus 82 ~~kIA~vQ~~v--~-~d---~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~--~~~~~~~~~~~~~~~~~~~l 153 (364)
.+++..+.... . .+ .+..++.+.+.++.|...|++.|++. +|+..... ....+.+ .+.++.+
T Consensus 59 gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~----~g~~~~~~~~~~~~~~~------~~~l~~l 128 (278)
T 1i60_A 59 HIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLGVKYVVAV----PLVTEQKIVKEEIKKSS------VDVLTEL 128 (278)
T ss_dssp SCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTCCEEEEE----CCBCSSCCCHHHHHHHH------HHHHHHH
T ss_pred CCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEe----cCCCCCCCCHHHHHHHH------HHHHHHH
Confidence 36776555432 1 23 35668889999999999999998872 23221111 1111111 1366677
Q ss_pred HHHHHHcCcEEEEe
Q 017888 154 SEVARLLKITIVGG 167 (364)
Q Consensus 154 ~~lA~~~~i~Iv~G 167 (364)
.+.|+++|+.+.+=
T Consensus 129 ~~~a~~~gv~l~lE 142 (278)
T 1i60_A 129 SDIAEPYGVKIALE 142 (278)
T ss_dssp HHHHGGGTCEEEEE
T ss_pred HHHHHhcCCEEEEE
Confidence 78888899987764
No 40
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=37.27 E-value=73 Score=27.91 Aligned_cols=63 Identities=14% Similarity=0.004 Sum_probs=41.3
Q ss_pred CHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHHcCcEEEEe
Q 017888 95 DKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (364)
Q Consensus 95 d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (364)
..+..++.+.+.++.|...|++.|++. +|+.........+.. .+.++.+.+.|+++|+.+.+-
T Consensus 96 ~r~~~~~~~~~~i~~a~~lG~~~v~~~----~G~~~~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~lE 158 (290)
T 3tva_A 96 TRASRVAEMKEISDFASWVGCPAIGLH----IGFVPESSSPDYSEL------VRVTQDLLTHAANHGQAVHLE 158 (290)
T ss_dssp THHHHHHHHHHHHHHHHHHTCSEEEEC----CCCCCCTTSHHHHHH------HHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEc----CCCCcccchHHHHHH------HHHHHHHHHHHHHcCCEEEEe
Confidence 346778999999999999999998874 232221111111111 136677788888999988764
No 41
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=36.75 E-value=81 Score=28.16 Aligned_cols=60 Identities=12% Similarity=0.052 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHHcCcE--EEE
Q 017888 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKIT--IVG 166 (364)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~--Iv~ 166 (364)
.+...+.+.+.++.|...|++.|++|-. +. ......+... -+.++.+.+.|+++||. +.+
T Consensus 103 ~~~~~~~~~~~i~~A~~lG~~~v~~~~~--~~--~~~~~~~~~~-------~~~l~~l~~~a~~~Gv~~~l~~ 164 (303)
T 3l23_A 103 TPKIMEYWKATAADHAKLGCKYLIQPMM--PT--ITTHDEAKLV-------CDIFNQASDVIKAEGIATGFGY 164 (303)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECSC--CC--CCSHHHHHHH-------HHHHHHHHHHHHHTTCTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCC--CC--CCCHHHHHHH-------HHHHHHHHHHHHHCCCcceEEE
Confidence 3667888999999999999999999732 11 0111111111 13667788888899998 664
No 42
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=36.75 E-value=56 Score=30.97 Aligned_cols=70 Identities=13% Similarity=0.057 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHCCCcEEEc----CCCCCCCCC--CCC---cc-chhhhhccCCCCchHHHHHHHHHHHcCcEEEEe
Q 017888 98 RNIAHARRAIEEAAEKGAKLILL----PEIWNSPYS--HDS---FP-VYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (364)
Q Consensus 98 ~n~~~i~~~i~~A~~~gadLvVf----PE~~l~gy~--~~~---~~-~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (364)
.+++.+.+.++.|++.|||.|=| |+..++.+. +.. .. .+-+.........+.+..|.+.|++.|+.++..
T Consensus 41 Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~st 120 (385)
T 1vli_A 41 GKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLST 120 (385)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECB
T ss_pred ccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEEEc
Confidence 34677888899999999999988 454434443 110 00 000111111223568899999999999998865
No 43
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=36.57 E-value=1.4e+02 Score=24.08 Aligned_cols=77 Identities=14% Similarity=0.021 Sum_probs=42.7
Q ss_pred eEEEEEecccc--------cCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHH
Q 017888 83 FKVGLCQLSVT--------ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLS 154 (364)
Q Consensus 83 ~kIA~vQ~~v~--------~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~ 154 (364)
..+.++++... .+.+...+.+.++++.+.+.++.+++.--.-...+.........+.+ ..+-+.++
T Consensus 75 pd~vvi~~G~ND~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~vil~~~~p~~~~~~~~~~~~~~~~------~~~n~~l~ 148 (204)
T 3p94_A 75 PKAVVILAGINDIAHNNGVIALENVFGNLVSMAELAKANHIKVIFCSVLPAYDFPWRPGMQPADKV------IQLNKWIK 148 (204)
T ss_dssp EEEEEEECCHHHHTTTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCSCBTTBTTCCCHHHH------HHHHHHHH
T ss_pred CCEEEEEeecCccccccCCCCHHHHHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCccccHHHHH------HHHHHHHH
Confidence 46777776431 24566666677777777778999988732211111110000111111 13567788
Q ss_pred HHHHHcCcEEE
Q 017888 155 EVARLLKITIV 165 (364)
Q Consensus 155 ~lA~~~~i~Iv 165 (364)
++|+++++.++
T Consensus 149 ~~a~~~~v~~i 159 (204)
T 3p94_A 149 EYADKNGLTYV 159 (204)
T ss_dssp HHHHHTTCEEE
T ss_pred HHHHHcCCcEE
Confidence 89999988765
No 44
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=36.43 E-value=68 Score=26.15 Aligned_cols=61 Identities=11% Similarity=0.195 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHHcCcEEE
Q 017888 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIV 165 (364)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv 165 (364)
.+...+.+.++++.+.+.++.+|++--..++. .....+.+.+ ..+.+.++++|+++++.++
T Consensus 112 ~~~~~~~l~~~i~~~~~~~~~vil~~p~~~~~---~~~~~~~~~~------~~~n~~~~~~a~~~~~~~v 172 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPRVREMFLLSPFYLEP---NRSDPMRKTV------DAYIEAMRDVAASEHVPFV 172 (216)
T ss_dssp HHHHHHHHHHHHHHHGGGSSEEEEECCCCCCC---CTTSHHHHHH------HHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEECCCcCCC---CcchHHHHHH------HHHHHHHHHHHHHcCCeEE
Confidence 55566667777777777799999882111111 1111111211 1366778889999887654
No 45
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=36.10 E-value=1.2e+02 Score=27.36 Aligned_cols=65 Identities=18% Similarity=0.149 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCc-cchhhhhccCCCCchHHHHHHHHHHHcCcEEEEe
Q 017888 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSF-PVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (364)
Q Consensus 97 ~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~-~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (364)
..|++.+.+.++.+.+.|.+++=+.=-+++-|..... +...+.. .+..+.+.++++++++.+++.
T Consensus 57 ~~nl~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w~~~~~~------~~~~~~~~~~~~~~gi~i~~H 122 (301)
T 2j6v_A 57 AENLRDLERILRFNADHGFALFRIGQHLIPFASHPLFPYDWEGAY------EEELARLGALARAFGQRLSMH 122 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCSCHHHHH------HHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeccCcccccCCCcccCCcCCCC------HHHHHHHHHHHHHcCCeEEEe
Confidence 7899999999999999998887663333333222111 0111110 136778899999999977664
No 46
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=36.08 E-value=97 Score=27.08 Aligned_cols=65 Identities=8% Similarity=-0.004 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCC--CCCCCCCCC--------ccchhhhhccCCCCchHHHHHHHHHHHcCcEEE
Q 017888 96 KERNIAHARRAIEEAAEKGAKLILLPEI--WNSPYSHDS--------FPVYAEDIDAGGDASPSTAMLSEVARLLKITIV 165 (364)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLvVfPE~--~l~gy~~~~--------~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv 165 (364)
.+..++.+.+.++.|...|++.|+++.. +..|..... .....+.. .+.++.+.+.|+++|+.+.
T Consensus 85 ~~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~ 158 (301)
T 3cny_A 85 IEKASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEV------CKGLNHYGEIAAKYGLKVA 158 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHH------HHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHH------HHHHHHHHHHHHHcCCEEE
Confidence 4556788899999999999999887642 111221110 01111111 1366777888888998876
Q ss_pred E
Q 017888 166 G 166 (364)
Q Consensus 166 ~ 166 (364)
+
T Consensus 159 l 159 (301)
T 3cny_A 159 Y 159 (301)
T ss_dssp E
T ss_pred E
Confidence 5
No 47
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=34.00 E-value=1.1e+02 Score=26.65 Aligned_cols=79 Identities=11% Similarity=0.104 Sum_probs=46.6
Q ss_pred ceEEEEEecccc-----cC---HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCC--CCccchhhhhccCCCCchHHH
Q 017888 82 KFKVGLCQLSVT-----AD---KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSH--DSFPVYAEDIDAGGDASPSTA 151 (364)
Q Consensus 82 ~~kIA~vQ~~v~-----~d---~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~--~~~~~~~~~~~~~~~~~~~~~ 151 (364)
.++|..+..... .+ .+..++.+.+.++.|...|++.|+++=.+.. +.. .......+.. .+.++
T Consensus 77 gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~-~~~~~p~~~~~~~~~------~~~l~ 149 (287)
T 3kws_A 77 NIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFNG-QVPALPHTMETRDFL------CEQFN 149 (287)
T ss_dssp SCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTT-CCSBCCSSHHHHHHH------HHHHH
T ss_pred CCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCC-cCCCCCCHHHHHHHH------HHHHH
Confidence 467765544311 23 3567888999999999999998887522111 110 0111111111 13667
Q ss_pred HHHHHHHHcCcEEEEe
Q 017888 152 MLSEVARLLKITIVGG 167 (364)
Q Consensus 152 ~l~~lA~~~~i~Iv~G 167 (364)
.+.+.|+++|+.+.+=
T Consensus 150 ~l~~~a~~~Gv~l~lE 165 (287)
T 3kws_A 150 EMGTFAAQHGTSVIFE 165 (287)
T ss_dssp HHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHcCCEEEEE
Confidence 7888888999887654
No 48
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=31.81 E-value=1.3e+02 Score=26.69 Aligned_cols=66 Identities=12% Similarity=-0.058 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCC-C--CccchhhhhccCCCCchHHHHHHHHHHHcCcEEEEe
Q 017888 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSH-D--SFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (364)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~-~--~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (364)
.+..++.+.+.++.|...|++.|+.|=....|... . ......+.+ .+.++.+.+.|+++|+.+.+=
T Consensus 102 r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~lE 170 (309)
T 2hk0_A 102 RAAGKAFFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARG------VEGINGIADFANDLGINLCIE 170 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHH------HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHH------HHHHHHHHHHHHHcCCEEEEe
Confidence 35678889999999999999999865211112211 1 111111111 136677778888899887653
No 49
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=30.79 E-value=1.1e+02 Score=26.68 Aligned_cols=57 Identities=11% Similarity=-0.136 Sum_probs=37.2
Q ss_pred EEEEeccCcccHHHHHHHhCCceEEEE--eCCC-CCCCChhHHHHHHHHHHHhcCcEEEEe
Q 017888 233 GIGICYDIRFQELAMIYGARGAHLICY--PGAF-NMTTGPLHWELLQRARATDNQLYVATC 290 (364)
Q Consensus 233 gv~IC~D~~fpe~~r~~~~~Gadlil~--ps~~-~~~~~~~~~~~~~~~rA~en~~~vv~~ 290 (364)
.+++|-|.. +++..++.+.|||+|+. |--| ........+..-...+++++++.+.++
T Consensus 37 ~I~~~lD~t-~~vi~eAi~~~adlIitHHP~~f~~~~~~i~~~~~~~i~~li~~~I~ly~~ 96 (247)
T 1nmo_A 37 KIVTGVTAS-QALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGW 96 (247)
T ss_dssp EEEEEEECC-HHHHHHHHHTTCSEEEEEECSCCTTSCCCCCTHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHhCCCCEEEECCchhccCCCccccchHHHHHHHHHHCCCEEEEe
Confidence 467777764 46788888899999996 5545 222111122333457788999998765
No 50
>2o3h_A DNA-(apurinic or apyrimidinic site) lyase; APE, endonuclease; 1.90A {Homo sapiens} PDB: 1bix_A 1dew_A* 1de8_B* 1de9_A* 2o3c_A
Probab=30.49 E-value=1e+02 Score=26.61 Aligned_cols=39 Identities=18% Similarity=0.175 Sum_probs=22.7
Q ss_pred ceEEEEEecccccCHHHHHHH-HHHHHHHHHHCCCcEEEcCCCCCC
Q 017888 82 KFKVGLCQLSVTADKERNIAH-ARRAIEEAAEKGAKLILLPEIWNS 126 (364)
Q Consensus 82 ~~kIA~vQ~~v~~d~~~n~~~-i~~~i~~A~~~gadLvVfPE~~l~ 126 (364)
.|||.. .|+.+ ......+ +.+.| .+.++|||++.|....
T Consensus 28 ~l~v~t--~Ni~~-~~~~~~~~i~~~i---~~~~~DIi~LQE~~~~ 67 (285)
T 2o3h_A 28 TLKIAS--WNVDG-LRAWIKKKGLDWV---KEEAPDILCLQETKCS 67 (285)
T ss_dssp CEEEEE--EECSS-HHHHHHTTHHHHH---HHHCCSEEEEECCCCC
T ss_pred ceEEEE--Eeccc-ChhhhhhhHHHHH---HhcCCCEEEEEEeecc
Confidence 356555 55542 2222233 44444 4568999999999754
No 51
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=29.79 E-value=72 Score=27.34 Aligned_cols=65 Identities=17% Similarity=0.177 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCcc-chhhhhccCCCCchHHHHHHHHHHHcCcEEEEe
Q 017888 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFP-VYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (364)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~-~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (364)
.+..++.+.+.++.|...|++.|++.= |+.....+ ...+.... .-+.++.+.+.|+++|+.+.+=
T Consensus 71 r~~~~~~~~~~i~~A~~lGa~~v~~~~----g~~~~~~~~~~~~~~~~---~~~~l~~l~~~a~~~gv~l~lE 136 (254)
T 3ayv_A 71 RGLTLRRLLFGLDRAAELGADRAVFHS----GIPHGRTPEEALERALP---LAEALGLVVRRARTLGVRLLLE 136 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEC----CCCTTCCHHHHHHTHHH---HHHHTHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEECC----CCCcccccccHHHHHHH---HHHHHHHHHHHHhhcCCEEEEc
Confidence 456688899999999999999987642 22222111 00110000 0135566777778889877653
No 52
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=29.19 E-value=2.8e+02 Score=25.30 Aligned_cols=38 Identities=13% Similarity=0.201 Sum_probs=29.5
Q ss_pred eEEEEEeccc--------ccCHHHHHHHHHHHHHHHHHCCCcEEEc
Q 017888 83 FKVGLCQLSV--------TADKERNIAHARRAIEEAAEKGAKLILL 120 (364)
Q Consensus 83 ~kIA~vQ~~v--------~~d~~~n~~~i~~~i~~A~~~gadLvVf 120 (364)
++|.++.... ....+..++.+.+.++.|.+.|+++|++
T Consensus 69 L~i~~~~~~~~~~~~~~~~~~r~~~i~~~~~~i~~a~~lG~~~v~~ 114 (367)
T 1tz9_A 69 LALLGIESVAIHDAIKAGTDQRDHYIDNYRQTLRNLGKCGISLVCY 114 (367)
T ss_dssp CEEEEECSCCCCHHHHHTCSTHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CeEEEEecCCCcHHHhcCCcCHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 6777665332 2345778889999999999999999998
No 53
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=28.24 E-value=1.5e+02 Score=25.16 Aligned_cols=60 Identities=17% Similarity=0.223 Sum_probs=32.9
Q ss_pred cCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHHcCcEEE
Q 017888 94 ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIV 165 (364)
Q Consensus 94 ~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv 165 (364)
....+|++++.+.+ .+.|+.+|+.- .+.. ..+.. ..+. .....+.+.++++|+++++.++
T Consensus 108 ~~~~~~l~~~i~~~---~~~g~~vil~t---p~p~--~~~~~--~~~~--~~~~~y~~~~~~vA~~~~v~~i 167 (233)
T 1k7c_A 108 LTFPAYLENAAKLF---TAKGAKVILSS---QTPN--NPWET--GTFV--NSPTRFVEYAELAAEVAGVEYV 167 (233)
T ss_dssp EBHHHHHHHHHHHH---HHTTCEEEEEC---CCCC--CTTTT--SSCC--CCCCHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHH---HHCCCEEEEEC---CCCc--cccCC--Cccc--cchHHHHHHHHHHHHHhCCeEE
Confidence 35667777665544 55677776641 1111 11100 0000 0123577889999999998776
No 54
>2yyb_A Hypothetical protein TTHA1606; structural genomics, unknown function; 2.60A {Thermus thermophilus}
Probab=27.58 E-value=1.3e+02 Score=26.34 Aligned_cols=57 Identities=4% Similarity=-0.077 Sum_probs=37.4
Q ss_pred EEEEeccCcccHHHHHHHhCCceEEEE--eCCCCCCCChhHHHHHHHHHHHhcCcEEEEe
Q 017888 233 GIGICYDIRFQELAMIYGARGAHLICY--PGAFNMTTGPLHWELLQRARATDNQLYVATC 290 (364)
Q Consensus 233 gv~IC~D~~fpe~~r~~~~~Gadlil~--ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~ 290 (364)
.+++|-|.. +++..++.+.|||+|+. |--|+...-...+..-...+++++++.+.++
T Consensus 38 ~I~~alD~t-~~vi~eAi~~~adlIitHHp~~f~~~~~~~~~~~~~i~~li~~~I~ly~~ 96 (242)
T 2yyb_A 38 KVGAAVDAG-EAIFRKALEEEVDFLIVHHGLFWGKPFPIVGHHKRRLETLFQGGINLYAA 96 (242)
T ss_dssp CEEEEEECS-HHHHHHHHHTTCSEEEEEECSCSSCCCCSCHHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCCcCcCcccccccHHHHHHHHHHHCCCeEEEe
Confidence 356677764 66778888999999996 5555211112233434457788999988765
No 55
>1wdu_A TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA binding protein; 2.40A {Bombyx mori} SCOP: d.151.1.1
Probab=27.57 E-value=45 Score=28.49 Aligned_cols=37 Identities=24% Similarity=0.212 Sum_probs=22.8
Q ss_pred EEEEecccccCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCC
Q 017888 85 VGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILLPEIWN 125 (364)
Q Consensus 85 IA~vQ~~v~~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l 125 (364)
+-++|.|+..... ..+.+ ++...+.++|||++.|...
T Consensus 20 lri~s~Nv~~~~~-~~~~l---~~~i~~~~~DIv~lQE~~~ 56 (245)
T 1wdu_A 20 YRVLQANLQRKKL-ATAEL---AIEAATRKAAIALIQEPYV 56 (245)
T ss_dssp EEEEEEECTTCHH-HHHHH---HHHHHHHTCSEEEEESCCC
T ss_pred eeeeeeeccccHH-HHHHH---HHHHhhcCCCEEEEEcccc
Confidence 4456677764322 12333 4444567999999999964
No 56
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=27.20 E-value=88 Score=31.62 Aligned_cols=71 Identities=21% Similarity=0.282 Sum_probs=40.1
Q ss_pred HHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHHcCcEEEEeeeeeec-CCeeEEEEEEEcC
Q 017888 108 EEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERS-GDRLYNTCCVFGS 186 (364)
Q Consensus 108 ~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~-~~~~yNsa~vi~~ 186 (364)
+.++.+|||||+.|=.+.... . -.+ .....++..|.+++++++.-+..-.+ ++..|....++.|
T Consensus 176 r~la~~GAdii~~psas~~~~--g----k~~---------~~~~l~~~rA~e~~~~vv~aN~~G~~~~~~~f~G~S~I~p 240 (634)
T 3ilv_A 176 IRHYEKGATLVLNPSASHFAF--G----KSA---------IRYDLVIGGSERFDCTYVYANLLGNEAGRMIYDGEVLIAH 240 (634)
T ss_dssp --CGGGTCSEEEEEECCBCCT--T----HHH---------HHHHHHHHHHHHTTSEEEEEECEEESSSSCEEECCEEEEE
T ss_pred HHHHHCCCcEEEEecCCcccc--C----cHH---------HHHHHHHHHHHHhCCEEEEEcCccCCCCceEEcceEEEEc
Confidence 344678999999986542111 0 001 23445677788999998854322222 3344543333448
Q ss_pred CCcEEEE
Q 017888 187 DGKLIAK 193 (364)
Q Consensus 187 ~G~i~~~ 193 (364)
+|+++..
T Consensus 241 ~G~vla~ 247 (634)
T 3ilv_A 241 KGKLIQR 247 (634)
T ss_dssp TTEEEEE
T ss_pred CCeEEEE
Confidence 9998764
No 57
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=26.91 E-value=1.2e+02 Score=28.22 Aligned_cols=54 Identities=17% Similarity=0.240 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHHcCcEEEEee
Q 017888 95 DKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGS 168 (364)
Q Consensus 95 d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs 168 (364)
+.+++++...+.++..++.|...|| |....|+. .-...++++|++.|+.||.++
T Consensus 77 ~~~~~~~~~~~~l~~~k~~Gg~tIV--d~T~~g~G------------------Rd~~~l~~is~~tGv~IV~~T 130 (360)
T 3tn4_A 77 REDESLRVAVEAAEKMKRHGIQTVV--DPTPNDCG------------------RNPAFLRRVAEETGLNIICAT 130 (360)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCEEE--ECCCTTTT------------------CCHHHHHHHHHHHCCEEEEEE
T ss_pred hhhhHHHHHHHHHHHHHhcCCCeEE--ECCCCCcC------------------cCHHHHHHHHHHcCCCEEEeC
Confidence 3466777778888888999999999 66655542 133558889999999999874
No 58
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=26.87 E-value=1.9e+02 Score=25.79 Aligned_cols=69 Identities=13% Similarity=0.122 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCcc------c-----hhhhhccCCCCchHHHHHHHHHHHcCcEE
Q 017888 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFP------V-----YAEDIDAGGDASPSTAMLSEVARLLKITI 164 (364)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~------~-----~~~~~~~~~~~~~~~~~l~~lA~~~~i~I 164 (364)
.++.++.+.+.++.|+..|++.|+-|=.+..|....... . ..+.... ..+.++.+.+.|+++|+.+
T Consensus 104 r~~~~~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~l~~~a~~~Gv~l 180 (335)
T 2qw5_A 104 RQEALEYLKSRVDITAALGGEIMMGPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYAN---AQPILDKLGEYAEIKKVKL 180 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEeccccCccccccCCcccccccccchhhhHHHHHHH---HHHHHHHHHHHHHHcCCEE
Confidence 356678899999999999999997653221122111000 0 0111100 0135667777888889877
Q ss_pred EEe
Q 017888 165 VGG 167 (364)
Q Consensus 165 v~G 167 (364)
.+=
T Consensus 181 ~lE 183 (335)
T 2qw5_A 181 AIE 183 (335)
T ss_dssp EEC
T ss_pred EEe
Confidence 653
No 59
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=26.29 E-value=1.2e+02 Score=22.78 Aligned_cols=43 Identities=9% Similarity=0.020 Sum_probs=25.9
Q ss_pred HHHHHHHHHHcCcE-EEEeeeeeecCCeeEEEEEEEcCCCcEEEEeec
Q 017888 150 TAMLSEVARLLKIT-IVGGSIPERSGDRLYNTCCVFGSDGKLIAKHRK 196 (364)
Q Consensus 150 ~~~l~~lA~~~~i~-Iv~Gs~~~~~~~~~yNsa~vi~~~G~i~~~y~K 196 (364)
++.+.+.+++.|+. ++.+. .....|. + +++.||+|..+..+.+
T Consensus 77 vd~~~~~l~~~G~~~~~~~p-~~~~~G~-~--~~~~DPdGn~iel~~~ 120 (128)
T 3g12_A 77 LEKTVQELVKIPGAMCILDP-TDMPDGK-K--AIVLDPDGHSIELCEL 120 (128)
T ss_dssp HHHHHHHHTTSTTCEEEEEE-EECC-CE-E--EEEECTTCCEEEEEC-
T ss_pred HHHHHHHHHHCCCceeccCc-eeCCCcc-E--EEEECCCCCEEEEEEe
Confidence 45555666777888 66542 1222333 3 8899999998766443
No 60
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=25.03 E-value=1.5e+02 Score=21.64 Aligned_cols=45 Identities=16% Similarity=0.169 Sum_probs=28.0
Q ss_pred HHHHHHHHHHcCcEEEEeeeeeecCCeeEEEEEEEcCCCcEEEEe
Q 017888 150 TAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKH 194 (364)
Q Consensus 150 ~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~i~~~y 194 (364)
++.+.+.+++.|+.++.+..........+..+++.||+|..+..+
T Consensus 84 ~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~ 128 (133)
T 3ey7_A 84 LSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVS 128 (133)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEE
Confidence 455555556778877665222222334456788999999876554
No 61
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=24.85 E-value=1.1e+02 Score=26.79 Aligned_cols=63 Identities=13% Similarity=-0.066 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCC--CC---CccchhhhhccCCCCchHHHHHHHHHHHcCcEEEEe
Q 017888 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSPYS--HD---SFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (364)
Q Consensus 97 ~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~--~~---~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (364)
+..++.+.+.++.|...|++.|+.+= .+|+. +. +.....+.. -+.++.+.+.|+++|+.+.+=
T Consensus 84 ~~~~~~~~~~i~~a~~lG~~~v~~~~--~~~~~~~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~Gv~l~lE 151 (294)
T 3vni_A 84 KNAKAFYTDLLKRLYKLDVHLIGGAL--YSYWPIDYTKTIDKKGDWERS------VESVREVAKVAEACGVDFCLE 151 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEST--TSCSSCCTTSCCCHHHHHHHH------HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCeeeccc--cCCCCCcCCCCCCHHHHHHHH------HHHHHHHHHHHHHcCCEEEEE
Confidence 46678889999999999999997421 12221 11 111111111 136677778888999887653
No 62
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=23.88 E-value=2.6e+02 Score=26.00 Aligned_cols=67 Identities=10% Similarity=-0.027 Sum_probs=47.2
Q ss_pred CeeEEEEEeccCcccHHHHHHHhCCceEEEEeCCCCCCCChhHHHHHHHHHHHhcCcEEEEecCCCC
Q 017888 229 VGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARD 295 (364)
Q Consensus 229 ~~rigv~IC~D~~fpe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~g~ 295 (364)
.-|+.++-+|=...+++.+.+...|++-|+.-+.-.-......+..-.-.+|.+.|+.||.++.+..
T Consensus 229 ~~~V~il~~~pG~~~~~l~a~~~~g~~GiVle~~G~Gn~p~~~~~~~~l~~a~~~Gi~VV~~Src~~ 295 (358)
T 2him_A 229 PQPIGVVTIYPGISADVVRNFLRQPVKALILRSYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMS 295 (358)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTSSSCSEEEEEEBTTTBCCCCHHHHHHHHHHHHTTCEEEEEESSSB
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEecCCCCCCCCcHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence 4599999999999999999888889988887653211111112333334677899999999988643
No 63
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=23.70 E-value=3.1e+02 Score=23.21 Aligned_cols=72 Identities=8% Similarity=0.124 Sum_probs=41.3
Q ss_pred CCCCCCCCceEEEEEecccccCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHH
Q 017888 74 PLPTPPVAKFKVGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAML 153 (364)
Q Consensus 74 ~~~~~~~~~~kIA~vQ~~v~~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l 153 (364)
|.+......||+++........ .+.+.++.+++.|.|-|=+.-..++ + . . .....+.+
T Consensus 9 p~~~~~~~~~klg~~~~~~~~~------~~~~~l~~~~~~G~~~vEl~~~~~~-~--~----~---------~~~~~~~~ 66 (257)
T 3lmz_A 9 PKAPKAVNPFHLGMAGYTFVNF------DLDTTLKTLERLDIHYLCIKDFHLP-L--N----S---------TDEQIRAF 66 (257)
T ss_dssp CCCCCCCCSSEEEECGGGGTTS------CHHHHHHHHHHTTCCEEEECTTTSC-T--T----C---------CHHHHHHH
T ss_pred CCcccCCCceEEEEEEEeecCC------CHHHHHHHHHHhCCCEEEEecccCC-C--C----C---------CHHHHHHH
Confidence 3333444569999866554421 2455666677778776633211111 1 0 0 01356788
Q ss_pred HHHHHHcCcEEEEe
Q 017888 154 SEVARLLKITIVGG 167 (364)
Q Consensus 154 ~~lA~~~~i~Iv~G 167 (364)
+++++++|+.++..
T Consensus 67 ~~~l~~~gl~i~~~ 80 (257)
T 3lmz_A 67 HDKCAAHKVTGYAV 80 (257)
T ss_dssp HHHHHHTTCEEEEE
T ss_pred HHHHHHcCCeEEEE
Confidence 99999999987654
No 64
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=23.56 E-value=2.6e+02 Score=25.53 Aligned_cols=64 Identities=14% Similarity=0.048 Sum_probs=46.7
Q ss_pred CeeEEEEEeccCcccHHHHHHHhCCceEEEEeCCCCCCCChhHHHHHHHHHHHhcCcEEEEecCCC
Q 017888 229 VGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPAR 294 (364)
Q Consensus 229 ~~rigv~IC~D~~fpe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~g 294 (364)
.-|+.++-+|=...+++.+.+...|++-|+.-+.-.-. -+ .+..-.-.+|.+.|++||.++.+.
T Consensus 217 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G~Gn-~p-~~~~~~l~~a~~~Gi~VV~~Sr~~ 280 (327)
T 1o7j_A 217 LPKVDILYGYQDDPEYLYDAAIQHGVKGIVYAGMGAGS-VS-VRGIAGMRKALEKGVVVMRSTRTG 280 (327)
T ss_dssp CCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEBTTTB-CC-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCC-CC-HHHHHHHHHHHHCCceEEEECCCC
Confidence 45999999999999999999888899888776542211 12 232233456788999999998874
No 65
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=23.28 E-value=2.7e+02 Score=25.44 Aligned_cols=64 Identities=13% Similarity=-0.072 Sum_probs=46.8
Q ss_pred CeeEEEEEeccCcccHHHHHHHhCCceEEEEeCCCCCCCChhHHHHHHHHHHHhcCcEEEEecCCC
Q 017888 229 VGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPAR 294 (364)
Q Consensus 229 ~~rigv~IC~D~~fpe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~g 294 (364)
.-|+.++-+|=...+++.+.+...|++-|+.-+.-.-. -+ .+..-.-.+|.+.|++||.++.+.
T Consensus 218 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G~Gn-~p-~~~~~~l~~a~~~Gi~VV~~Sr~~ 281 (332)
T 2wlt_A 218 LPKVDIIYTHAGMTPDLFQASLNSHAKGVVIAGVGNGN-VS-AGFLKAMQEASQMGVVIVRSSRVG 281 (332)
T ss_dssp CCCEEEEECCTTCCTHHHHHHHHTTCSEEEEEEBTTTB-CC-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCcEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCC-CC-HHHHHHHHHHHHCCCEEEEECCCC
Confidence 46999999999999999999888899888776532211 12 233233456788999999998864
No 66
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=23.28 E-value=2.8e+02 Score=25.37 Aligned_cols=64 Identities=19% Similarity=-0.011 Sum_probs=46.7
Q ss_pred CeeEEEEEeccCcccHHHHHHHhCCceEEEEeCCCCCCCChhHHHHHHHHHHHhcCcEEEEecCCC
Q 017888 229 VGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPAR 294 (364)
Q Consensus 229 ~~rigv~IC~D~~fpe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~g 294 (364)
.-|+.++-+|=...+++.+.+...|++-|+.-+.-.-. -+ .+..-.-.+|.+.|++||.++.+.
T Consensus 215 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVle~~G~Gn-~p-~~~~~~l~~a~~~gi~VV~~Sr~~ 278 (330)
T 1wsa_A 215 LPRVDILYAHPDDTDVLVNAALQAGAKGIIHAGMGNGN-PF-PLTQNALEKAAKSGVVVARSSRVG 278 (330)
T ss_dssp CCCEEEEECCSSCCSHHHHHHHHTTCSEEEEEEBTTTB-CC-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCceEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCC-CC-HHHHHHHHHHHHCCCEEEEECCCC
Confidence 45999999999999999999888899888776532211 12 233233456788999999998764
No 67
>4f1h_A Tyrosyl-DNA phosphodiesterase 2; hydrolase-DNA complex; HET: DNA; 1.66A {Danio rerio} PDB: 4fpv_A* 4f1h_B*
Probab=23.12 E-value=35 Score=28.28 Aligned_cols=39 Identities=10% Similarity=0.059 Sum_probs=23.5
Q ss_pred ceEEEEEecccc--cCHHHHHHHHHHHHHHHHHCCCcEEEcCCC
Q 017888 82 KFKVGLCQLSVT--ADKERNIAHARRAIEEAAEKGAKLILLPEI 123 (364)
Q Consensus 82 ~~kIA~vQ~~v~--~d~~~n~~~i~~~i~~A~~~gadLvVfPE~ 123 (364)
+|||...-++-. .+.....+.+.+.| .+.++|||+|.|.
T Consensus 3 ~l~v~t~Ni~g~~~~~~~~r~~~i~~~i---~~~~pDIi~LQEv 43 (250)
T 4f1h_A 3 KLSIISWNVDGLDTLNLADRARGLCSYL---ALYTPDVVFLQEL 43 (250)
T ss_dssp CEEEEEEECCTTCCTTHHHHHHHHHHHH---HHHCCSEEEEEEE
T ss_pred eEEEEEEEeCCCCCcCHHHHHHHHHHHH---HHcCCCEEEEEeC
Confidence 467765443311 24444455555555 4568999999996
No 68
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=23.09 E-value=83 Score=28.72 Aligned_cols=24 Identities=8% Similarity=0.195 Sum_probs=19.5
Q ss_pred eeEEEEEEEcCCCcEEEEeecccc
Q 017888 176 RLYNTCCVFGSDGKLIAKHRKIHL 199 (364)
Q Consensus 176 ~~yNsa~vi~~~G~i~~~y~K~~L 199 (364)
..+-+.++||++|.+...|+|...
T Consensus 100 ~~~r~tfiId~~G~i~~~~~~v~~ 123 (322)
T 4eo3_A 100 KTVRSTFLIDRWGFVRKEWRRVKV 123 (322)
T ss_dssp EECCEEEEECTTSBEEEEEESCCS
T ss_pred cCccEEEEECCCCEEEEEEeCCCc
Confidence 344578999999999999998763
No 69
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=23.03 E-value=82 Score=27.40 Aligned_cols=66 Identities=14% Similarity=0.073 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCC---CCC-CccchhhhhccCCCCchHHHHHHHHHHHcCcEEEEe
Q 017888 96 KERNIAHARRAIEEAAEKGAKLILLPEIWNSPY---SHD-SFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (364)
Q Consensus 96 ~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy---~~~-~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (364)
.+..++.+.+.++.|...|++.|+.|=....|. ... ......+.. .+.++.+.+.|+++|+.+.+=
T Consensus 83 r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~l~~l~~~a~~~gv~l~lE 152 (290)
T 2qul_A 83 RDAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRA------IESVRRVIKVAEDYGIIYALE 152 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHH------HHHHHTTHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHH------HHHHHHHHHHHHHcCCEEEEE
Confidence 356678899999999999999998541100122 110 111111111 135666778888899887654
No 70
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=22.73 E-value=2.1e+02 Score=26.54 Aligned_cols=64 Identities=13% Similarity=0.039 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCC---CCccchhhhhccCCCCchHHHHHHHHHHHcC--cEEEEe
Q 017888 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSH---DSFPVYAEDIDAGGDASPSTAMLSEVARLLK--ITIVGG 167 (364)
Q Consensus 97 ~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~---~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~--i~Iv~G 167 (364)
+..++.+.+.++.|...|++.|++.=.. .|+.. .+.....+.+ -+.++.+.+.|+++| +.|.+=
T Consensus 112 ~~~i~~~~~~i~~A~~LGa~~vvv~~G~-~g~~~~~~~~~~~~~~~~------~e~L~~l~~~A~~~G~~v~l~lE 180 (394)
T 1xla_A 112 RFALAKVLHNIDLAAEMGAETFVMWGGR-EGSEYDGSKDLAAALDRM------REGVDTAAGYIKDKGYNLRIALE 180 (394)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEECCTT-CEESSGGGCCHHHHHHHH------HHHHHHHHHHHHHHTCCCEEEEC
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEECCCC-CccccccccCHHHHHHHH------HHHHHHHHHHHHhcCCCeEEEEe
Confidence 5678889999999999999988762111 11110 1111111111 136667777778888 877653
No 71
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=22.18 E-value=3e+02 Score=25.10 Aligned_cols=64 Identities=19% Similarity=-0.006 Sum_probs=46.7
Q ss_pred CeeEEEEEeccCcccHHHHHHHhCCceEEEEeCCCCCCCChhHHHHHHHHHHHhcCcEEEEecCCC
Q 017888 229 VGRIGIGICYDIRFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPAR 294 (364)
Q Consensus 229 ~~rigv~IC~D~~fpe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~g 294 (364)
.-|+.++-+|=...+++.+.+...|++-|+.-+.-.-. .+ .+..-.-.+|.+.|+.||.++.+.
T Consensus 211 ~~~V~il~~~pG~~~~~l~~~~~~g~~GiVl~~~G~Gn-~p-~~~~~~l~~a~~~gi~VV~~Sr~~ 274 (326)
T 1nns_A 211 LPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGN-LY-KSVFDTLATAAKTGTAVVRSSRVP 274 (326)
T ss_dssp CCCEEEEECCTTCCSHHHHHHHHTTCSEEEEEEBTTTB-CC-HHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCceEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCC-CC-HHHHHHHHHHHHCCCEEEEECCCC
Confidence 45899999999999999999888899888776542211 12 233233456788999999998864
No 72
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=21.61 E-value=2.9e+02 Score=23.93 Aligned_cols=71 Identities=17% Similarity=0.037 Sum_probs=41.8
Q ss_pred HHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHHcCcEEEEeeeeeecCCeeEEEEEEEc
Q 017888 106 AIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFG 185 (364)
Q Consensus 106 ~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~ 185 (364)
.+..|...+++++++=|-+.. . ..... ....+.+.+++++ +..|++-+.....-..+.+..+++.
T Consensus 163 ~iAraL~~~p~lllLDEPts~-L-----D~~~~--------~~l~~~l~~l~~~-g~tvi~vtHd~~~~~~~~d~v~~l~ 227 (257)
T 1g6h_A 163 EIGRALMTNPKMIVMDEPIAG-V-----APGLA--------HDIFNHVLELKAK-GITFLIIEHRLDIVLNYIDHLYVMF 227 (257)
T ss_dssp HHHHHHHTCCSEEEEESTTTT-C-----CHHHH--------HHHHHHHHHHHHT-TCEEEEECSCCSTTGGGCSEEEEEE
T ss_pred HHHHHHHcCCCEEEEeCCccC-C-----CHHHH--------HHHHHHHHHHHHC-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 355667789999999997532 1 11111 1356667777665 6666654332222224556777775
Q ss_pred CCCcEEE
Q 017888 186 SDGKLIA 192 (364)
Q Consensus 186 ~~G~i~~ 192 (364)
+|+++.
T Consensus 228 -~G~i~~ 233 (257)
T 1g6h_A 228 -NGQIIA 233 (257)
T ss_dssp -TTEEEE
T ss_pred -CCEEEE
Confidence 898864
No 73
>4gew_A 5'-tyrosyl-DNA phosphodiesterase; 5'-phosphotyrosyl-DNA diesterase, hydrolase; 2.35A {Caenorhabditis elegans} PDB: 4f1i_A
Probab=21.54 E-value=54 Score=30.44 Aligned_cols=37 Identities=8% Similarity=0.187 Sum_probs=22.2
Q ss_pred ceEEEEEeccccc----CHHHHHHHHHHHHHHHHHCCCcEEEcCCC
Q 017888 82 KFKVGLCQLSVTA----DKERNIAHARRAIEEAAEKGAKLILLPEI 123 (364)
Q Consensus 82 ~~kIA~vQ~~v~~----d~~~n~~~i~~~i~~A~~~gadLvVfPE~ 123 (364)
+|||.. .|+.+ +.......+.++| .+.++|||+|.|.
T Consensus 119 ~lkVlS--WNI~Gl~~~~~~~R~~~I~~~I---~~~~PDIV~LQEv 159 (362)
T 4gew_A 119 EVSVMS--WNIDGLDGRSLLTRMKAVAHIV---KNVNPDILFLQEV 159 (362)
T ss_dssp EEEEEE--EECCTTCCTTHHHHHHHHHHHH---HHHCCSEEEEEEE
T ss_pred eEEEEE--EEeCCCCCcCHHHHHHHHHHHH---HHcCCCEEEEEcC
Confidence 355555 55542 3333344444444 5678999999997
No 74
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=21.45 E-value=3e+02 Score=25.83 Aligned_cols=42 Identities=10% Similarity=0.230 Sum_probs=32.2
Q ss_pred ceEEEEEecc-c-------ccCHHHHHHHHHHHHHHHHHCCCcEEEcCCC
Q 017888 82 KFKVGLCQLS-V-------TADKERNIAHARRAIEEAAEKGAKLILLPEI 123 (364)
Q Consensus 82 ~~kIA~vQ~~-v-------~~d~~~n~~~i~~~i~~A~~~gadLvVfPE~ 123 (364)
.++|.+++.. + ..+.++.++.+.+.|+.|++.|+.+|+...+
T Consensus 77 GL~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~~i~~aa~lGi~~v~~nf~ 126 (386)
T 3bdk_A 77 GLEITVIESIPVHEDIKQGKPNRDALIENYKTSIRNVGAAGIPVVCYNFM 126 (386)
T ss_dssp TCEEEEEECCCCCHHHHTTCTTHHHHHHHHHHHHHHHHTTTCCEEEECCC
T ss_pred CCEEEEEeccccccccccCcHHHHHHHHHHHHHHHHHHHcCCCEEEEcCc
Confidence 4788877532 1 1457888999999999999999999996433
No 75
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=21.42 E-value=2.4e+02 Score=24.84 Aligned_cols=57 Identities=16% Similarity=0.072 Sum_probs=38.2
Q ss_pred EEEEeccCcccHHHHHHHhCCceEEEE--eCCCCCCC--ChhHHHHHHHHHHHhcCcEEEEe
Q 017888 233 GIGICYDIRFQELAMIYGARGAHLICY--PGAFNMTT--GPLHWELLQRARATDNQLYVATC 290 (364)
Q Consensus 233 gv~IC~D~~fpe~~r~~~~~Gadlil~--ps~~~~~~--~~~~~~~~~~~rA~en~~~vv~~ 290 (364)
.+++|-|.. +++..++.+.|||+||. |--|.... ....+..-...+++++++.+.++
T Consensus 40 ~I~~alD~t-~~vi~eAi~~gadlIitHHP~~f~~~~~~~~~~~~~~~i~~li~~~I~lya~ 100 (267)
T 2fyw_A 40 RVMVALDIR-EETVAEAIEKGVDLIIVKHAPIFRPIKDLLASRPQNQIYIDLIKHDIAVYVS 100 (267)
T ss_dssp EEEEESCCC-HHHHHHHHHTTCSEEEESSCSCCSCCCCCCTTSHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCccccCCccccccCchHHHHHHHHHHCCCeEEEe
Confidence 467788875 66778888999999996 44442211 11233334457788999998765
No 76
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=21.05 E-value=1.3e+02 Score=25.84 Aligned_cols=58 Identities=10% Similarity=0.083 Sum_probs=40.5
Q ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHHcCc
Q 017888 83 FKVGLCQLSVTADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKI 162 (364)
Q Consensus 83 ~kIA~vQ~~v~~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i 162 (364)
++|..+...... ..+.+.+.++.|...|++.|+++ +|. +.++.+.+.|+++|+
T Consensus 77 l~i~~~~~~~~~----~~~~~~~~i~~A~~lGa~~v~~~----~~~-------------------~~~~~l~~~a~~~gv 129 (262)
T 3p6l_A 77 IKIVGTGVYVAE----KSSDWEKMFKFAKAMDLEFITCE----PAL-------------------SDWDLVEKLSKQYNI 129 (262)
T ss_dssp CEEEEEEEECCS----STTHHHHHHHHHHHTTCSEEEEC----CCG-------------------GGHHHHHHHHHHHTC
T ss_pred CeEEEEeccCCc----cHHHHHHHHHHHHHcCCCEEEec----CCH-------------------HHHHHHHHHHHHhCC
Confidence 677666554332 23457788899999999999986 221 144678889999999
Q ss_pred EEEEe
Q 017888 163 TIVGG 167 (364)
Q Consensus 163 ~Iv~G 167 (364)
.+.+=
T Consensus 130 ~l~~E 134 (262)
T 3p6l_A 130 KISVH 134 (262)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 87654
No 77
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=20.90 E-value=2.6e+02 Score=24.66 Aligned_cols=72 Identities=19% Similarity=0.191 Sum_probs=41.3
Q ss_pred HHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHHHcCcEEEEeeeeeecCCeeEEEEEEEcC
Q 017888 107 IEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGS 186 (364)
Q Consensus 107 i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~ 186 (364)
+..|...+++++++=|-+.. +..... ....+.+.+++++.+..|++-+.....-..+....+++.
T Consensus 154 iAraL~~~P~lLlLDEPts~------LD~~~~--------~~i~~~l~~l~~~~g~tvi~vtHdl~~~~~~~drv~~l~- 218 (275)
T 3gfo_A 154 IAGVLVMEPKVLILDEPTAG------LDPMGV--------SEIMKLLVEMQKELGITIIIATHDIDIVPLYCDNVFVMK- 218 (275)
T ss_dssp HHHHHTTCCSEEEEECTTTT------CCHHHH--------HHHHHHHHHHHHHHCCEEEEEESCCSSGGGGCSEEEEEE-
T ss_pred HHHHHHcCCCEEEEECcccc------CCHHHH--------HHHHHHHHHHHhhCCCEEEEEecCHHHHHHhCCEEEEEE-
Confidence 45566678999999887532 111111 136667777774447666654332221123456677775
Q ss_pred CCcEEEE
Q 017888 187 DGKLIAK 193 (364)
Q Consensus 187 ~G~i~~~ 193 (364)
+|+++..
T Consensus 219 ~G~i~~~ 225 (275)
T 3gfo_A 219 EGRVILQ 225 (275)
T ss_dssp TTEEEEE
T ss_pred CCEEEEE
Confidence 8988754
No 78
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=20.58 E-value=79 Score=28.25 Aligned_cols=66 Identities=17% Similarity=-0.011 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEcCCCCCC-CCCCCCccchhhhhccCCCCchHHHHHHHHHHHcCcE-EEE
Q 017888 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNS-PYSHDSFPVYAEDIDAGGDASPSTAMLSEVARLLKIT-IVG 166 (364)
Q Consensus 97 ~~n~~~i~~~i~~A~~~gadLvVfPE~~l~-gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~~~~i~-Iv~ 166 (364)
+..++.+.+.++.|...|+..|+.|=...+ +.. .......+.... ..+.++.+.+.|+++|+. |.+
T Consensus 110 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~-~~~~~~~~~~~~---~~~~l~~l~~~a~~~Gv~~l~l 177 (316)
T 3qxb_A 110 SLGYQHLKRAIDMTAAMEVPATGMPFGSYSAADA-LNPARREEIYAI---ARDMWIELAAYAKRQGLSMLYV 177 (316)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEECCBBCCHHHH-TCHHHHHHHHHH---HHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEecCCCcCcccc-CCcccHHHHHHH---HHHHHHHHHHHHHhcCCeEEEE
Confidence 466788899999999999999997644311 100 000000011000 013566777788889987 654
No 79
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=20.55 E-value=1.4e+02 Score=26.69 Aligned_cols=68 Identities=10% Similarity=-0.030 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHCCCcEEEcCCCCCCC---CCCCCccc--hhhhhccCCCCchHHHHHHHHHHHcCcEEEEe
Q 017888 97 ERNIAHARRAIEEAAEKGAKLILLPEIWNSP---YSHDSFPV--YAEDIDAGGDASPSTAMLSEVARLLKITIVGG 167 (364)
Q Consensus 97 ~~n~~~i~~~i~~A~~~gadLvVfPE~~l~g---y~~~~~~~--~~~~~~~~~~~~~~~~~l~~lA~~~~i~Iv~G 167 (364)
+..++.+.+.++.|...|++.|+++=....+ +.....+. ..+.... ..+.++.+.+.|+++|+.+.+=
T Consensus 107 ~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~l~~~a~~~Gv~l~lE 179 (340)
T 2zds_A 107 QRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQD---FADRWNPILDVFDAEGVRFAHE 179 (340)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHH---HHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHH---HHHHHHHHHHHHHHcCCEEEEE
Confidence 4567888899999999999998874221110 00000000 0111100 0135667777888899877653
No 80
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=20.48 E-value=2.3e+02 Score=22.48 Aligned_cols=69 Identities=12% Similarity=0.186 Sum_probs=38.9
Q ss_pred EEEEEecccc-----cCHHHHHHHHHHHHHHHHHCCCcEEEcCCCCCCCCCCCCccchhhhhccCCCCchHHHHHHHHHH
Q 017888 84 KVGLCQLSVT-----ADKERNIAHARRAIEEAAEKGAKLILLPEIWNSPYSHDSFPVYAEDIDAGGDASPSTAMLSEVAR 158 (364)
Q Consensus 84 kIA~vQ~~v~-----~d~~~n~~~i~~~i~~A~~~gadLvVfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~~~l~~lA~ 158 (364)
.+.++++... .+.+...+.+.++++.+.+.++.+++.--. ++.. .. ..+. ....+.++++|+
T Consensus 64 d~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~~~-~p~~-~~--~~~~---------~~~n~~~~~~a~ 130 (190)
T 1ivn_A 64 RWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQIR-LPAN-YG--RRYN---------EAFSAIYPKLAK 130 (190)
T ss_dssp SEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECCC-CCGG-GC--HHHH---------HHHHHHHHHHHH
T ss_pred CEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEecc-CCcc-hh--HHHH---------HHHHHHHHHHHH
Confidence 4555655432 245556666666777777778998876211 1110 00 0111 135567889999
Q ss_pred HcCcEEE
Q 017888 159 LLKITIV 165 (364)
Q Consensus 159 ~~~i~Iv 165 (364)
++++.++
T Consensus 131 ~~~v~~i 137 (190)
T 1ivn_A 131 EFDVPLL 137 (190)
T ss_dssp HTTCCEE
T ss_pred HcCCeEE
Confidence 9987665
No 81
>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A
Probab=20.36 E-value=1.8e+02 Score=22.11 Aligned_cols=46 Identities=17% Similarity=0.176 Sum_probs=27.7
Q ss_pred HHHHHHHHHHcCcEEEEeeeeeecCCeeEEEEEEEcCCCcEEEEee
Q 017888 150 TAMLSEVARLLKITIVGGSIPERSGDRLYNTCCVFGSDGKLIAKHR 195 (364)
Q Consensus 150 ~~~l~~lA~~~~i~Iv~Gs~~~~~~~~~yNsa~vi~~~G~i~~~y~ 195 (364)
++.+.+.+++.|+.++.+..........+-.+++.||+|..+..+.
T Consensus 97 l~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~ 142 (152)
T 3huh_A 97 INDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQ 142 (152)
T ss_dssp HHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred HHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEe
Confidence 4445555567788776652222223344567788999998766543
No 82
>2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1
Probab=20.19 E-value=2e+02 Score=27.17 Aligned_cols=57 Identities=18% Similarity=0.076 Sum_probs=40.0
Q ss_pred EEEEeccCcccHHHHHHHhCCceEEEE--eCCCCCCC--ChhHHHHHHHHHHHhcCcEEEEe
Q 017888 233 GIGICYDIRFQELAMIYGARGAHLICY--PGAFNMTT--GPLHWELLQRARATDNQLYVATC 290 (364)
Q Consensus 233 gv~IC~D~~fpe~~r~~~~~Gadlil~--ps~~~~~~--~~~~~~~~~~~rA~en~~~vv~~ 290 (364)
++++|-|.. +++..++...|||+||. |--|.... ....+..-...++++|++.|.++
T Consensus 66 ~Vl~alD~t-~~Vv~eAi~~gadlIItHHPlif~~lk~i~~~~~~~r~i~~li~~~Iavya~ 126 (397)
T 2gx8_A 66 HVLIALDVT-EEVVDEAIQLGANVIIAHHPLIFNPLKAIHTDKAYGKIIEKCIKNDIAIYAA 126 (397)
T ss_dssp EEEEESSCC-HHHHHHHHHHTCCEEEESSCSCCSCCSCCCTTSHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEEcCC-HHHHHHHHHCCCCEEEECCccccCCccccCcCcHHHHHHHHHHHCCCeEEEe
Confidence 578888875 67888888999999996 44442221 12334445567899999998765
No 83
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=20.14 E-value=2.5e+02 Score=25.79 Aligned_cols=64 Identities=14% Similarity=-0.058 Sum_probs=46.8
Q ss_pred CeeEEEEEeccC-cccHHHHHHHhCCceEEEEeCCCCCCCChhHHHHHHHHHHHhcCcEEEEecCCC
Q 017888 229 VGRIGIGICYDI-RFQELAMIYGARGAHLICYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPAR 294 (364)
Q Consensus 229 ~~rigv~IC~D~-~fpe~~r~~~~~Gadlil~ps~~~~~~~~~~~~~~~~~rA~en~~~vv~~n~~g 294 (364)
.-|+.++-+|-. ..+++.+.+...|++-|+.-+...-. -+. +..-.-.+|.+.|+.||.++.+.
T Consensus 220 ~~~V~il~~~pG~~~~~~l~a~~~~g~~GiVle~~G~Gn-~p~-~~~~~l~~a~~~Gi~VV~~Src~ 284 (334)
T 3nxk_A 220 LPKVDILYSYSNDGSGVAAKALFEHGTKGIVVAGSGAGS-IHK-NQKDVLKELLKKGLKVVVSSRVV 284 (334)
T ss_dssp CCCEEEEECCTTCCHHHHHHHHHHTTCCEEEEEEBTTTB-CCH-HHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCcEEEEEEeCCCCCHHHHHHHHhCCCCEEEEeeECCCC-CcH-HHHHHHHHHHHCCCEEEEeCCCC
Confidence 458999999998 88999998888999888876542211 122 33334567789999999998774
Done!