BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017890
(364 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54M22|ODBA_DICDI 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=bkdA PE=3 SV=1
Length = 441
Score = 304 bits (779), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 137/253 (54%), Positives = 180/253 (71%), Gaps = 1/253 (0%)
Query: 106 VPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTI 165
+PC+ ++D G + K SKE +KMY+ M+TL VMDS+LY+ QRQGR SFY+T+
Sbjct: 64 IPCYTIMDQEGVVSKPDQDPNFSKEEVIKMYTTMLTLNVMDSILYDVQRQGRISFYMTSF 123
Query: 166 GEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHY 225
GEEAI+IGSAAAL D I QYRE GV +WRG+T+ NQ N+ D GKGRQMP+H+
Sbjct: 124 GEEAIHIGSAAALEMSDTIFAQYRETGVFMWRGFTINDIINQCCTNEHDLGKGRQMPMHF 183
Query: 226 GSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAV 285
GS+K+N TISSP+ TQLPQAVG +Y+ K+ + C + Y G+G SEGDFHAA+NFAA
Sbjct: 184 GSRKINLQTISSPLTTQLPQAVGSSYAQKLAGEKNCTIVYFGEGAASEGDFHAAMNFAAA 243
Query: 286 MEAPVVFICRNNGWAISTNISEQFRSDGIVVKG-RAYGIRSIRVDGNDALAVYTAVQAAR 344
+ P +F CRNN WAIST EQ++ DGI +G YG+++IRVDGND AVY + AR
Sbjct: 244 LSTPTIFFCRNNKWAISTPSKEQYKGDGIAGRGPNGYGMKTIRVDGNDIWAVYNVTKLAR 303
Query: 345 EMAISEKRPVLVE 357
++A+ E+ PVL+E
Sbjct: 304 KIAVEEQVPVLIE 316
>sp|O45924|ODBA_CAEEL 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
OS=Caenorhabditis elegans GN=Y39E4A.3 PE=1 SV=2
Length = 431
Score = 304 bits (778), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 142/272 (52%), Positives = 189/272 (69%), Gaps = 2/272 (0%)
Query: 88 KVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDS 147
K +T ++ + +P +RV + G++I S ++ ++KMY M L +MD
Sbjct: 41 KAAFTEKLEIVNADDTPALPIYRVTNAVGDVIDKSQDPNFDEQTSLKMYKTMTQLNIMDR 100
Query: 148 VLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQ 207
+LY++QRQGR SFY+T+ GEE ++GSAAAL D I QYRE GVLLWRGYT++ F NQ
Sbjct: 101 ILYDSQRQGRISFYMTSFGEEGNHVGSAAALEPQDLIYGQYREAGVLLWRGYTMENFMNQ 160
Query: 208 VFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEK-KDACAVAYT 266
+ N D GKGRQMP+H+G+K+ N++TISSP+ TQLPQAVG AY+ K +K + AV Y
Sbjct: 161 CYGNADDLGKGRQMPMHFGTKERNFVTISSPLTTQLPQAVGSAYAFKQQKDNNRIAVVYF 220
Query: 267 GDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSI 326
GDG SEGD HAA NFAA ++ P++F CRNNG+AIST SEQ+ DGI KG AYG+ +I
Sbjct: 221 GDGAASEGDAHAAFNFAATLKCPIIFFCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHTI 280
Query: 327 RVDGNDALAVYTAVQAAREMAISEKRPVLVEV 358
RVDGND LAVY A + AR +A++ RPVL+E
Sbjct: 281 RVDGNDLLAVYNATKEARRVALT-NRPVLIEA 311
>sp|Q8HXY4|ODBA_MACFA 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
OS=Macaca fascicularis GN=BCKDHA PE=2 SV=1
Length = 445
Score = 297 bits (761), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 149/311 (47%), Positives = 196/311 (63%), Gaps = 13/311 (4%)
Query: 52 LFSPG-----RSESTVAANQLDSLSSSDSDDDHQVLDFPGGKVGYTSEMRFIPESSEKRV 106
L+ PG RS Q SL DD Q FPG + ++ FI + +
Sbjct: 25 LWRPGARGLARSHPHRQQQQFSSL-----DDKPQ---FPGASAEFIDKLEFIQPNVISGI 76
Query: 107 PCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIG 166
P +RV+D G++I S+ + KE +K+Y M L MD +LYE+QRQGR SFY+T G
Sbjct: 77 PIYRVMDRQGQIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYG 136
Query: 167 EEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYG 226
EE ++GSAAAL D + QYRE GVL++R Y L+ F Q + N +D GKGRQMP+HYG
Sbjct: 137 EEGTHVGSAAALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYG 196
Query: 227 SKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVM 286
K+ +++TISSP+ATQ+PQAVG AY+ K + + Y G+G SEGD HA NFAA +
Sbjct: 197 CKERHFVTISSPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATL 256
Query: 287 EAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREM 346
E P++F CRNNG+AIST SEQ+R DGI +G YGI SIRVDGND AVY A + AR
Sbjct: 257 ECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRR 316
Query: 347 AISEKRPVLVE 357
A++E +P L+E
Sbjct: 317 AVAENQPFLIE 327
>sp|P12694|ODBA_HUMAN 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Homo
sapiens GN=BCKDHA PE=1 SV=2
Length = 445
Score = 296 bits (759), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/301 (48%), Positives = 192/301 (63%), Gaps = 8/301 (2%)
Query: 57 RSESTVAANQLDSLSSSDSDDDHQVLDFPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNG 116
RS Q SL DD Q FPG + ++ FI + +P +RV+D G
Sbjct: 35 RSHPPRQQQQFSSL-----DDKPQ---FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQG 86
Query: 117 ELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAA 176
++I S+ + KE +K+Y M L MD +LYE+QRQGR SFY+T GEE ++GSAA
Sbjct: 87 QIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAA 146
Query: 177 ALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITIS 236
AL D + QYRE GVL++R Y L+ F Q + N +D GKGRQMP+HYG K+ +++TIS
Sbjct: 147 ALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTIS 206
Query: 237 SPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRN 296
SP+ATQ+PQAVG AY+ K + + Y G+G SEGD HA NFAA +E P++F CRN
Sbjct: 207 SPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRN 266
Query: 297 NGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLV 356
NG+AIST SEQ+R DGI +G YGI SIRVDGND AVY A + AR A++E +P L+
Sbjct: 267 NGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLI 326
Query: 357 E 357
E
Sbjct: 327 E 327
>sp|A5A6H9|ODBA_PANTR 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Pan
troglodytes GN=BCKDHA PE=2 SV=1
Length = 445
Score = 296 bits (759), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/301 (48%), Positives = 192/301 (63%), Gaps = 8/301 (2%)
Query: 57 RSESTVAANQLDSLSSSDSDDDHQVLDFPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNG 116
RS Q SL DD Q FPG + ++ FI + +P +RV+D G
Sbjct: 35 RSHPRRQQQQFSSL-----DDKPQ---FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQG 86
Query: 117 ELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAA 176
++I S+ + KE +K+Y M L MD +LYE+QRQGR SFY+T GEE ++GSAA
Sbjct: 87 QIINPSEDPHLPKEKVLKLYKSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHVGSAA 146
Query: 177 ALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITIS 236
AL D + QYRE GVL++R Y L+ F Q + N +D GKGRQMP+HYG K+ +++TIS
Sbjct: 147 ALDNTDLVFGQYREAGVLMYRDYPLELFMAQCYGNISDLGKGRQMPVHYGCKERHFVTIS 206
Query: 237 SPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRN 296
SP+ATQ+PQAVG AY+ K + + Y G+G SEGD HA NFAA +E P++F CRN
Sbjct: 207 SPLATQIPQAVGAAYAAKRANANRVVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRN 266
Query: 297 NGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLV 356
NG+AIST SEQ+R DGI +G YGI SIRVDGND AVY A + AR A++E +P L+
Sbjct: 267 NGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLI 326
Query: 357 E 357
E
Sbjct: 327 E 327
>sp|P11960|ODBA_RAT 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
(Fragment) OS=Rattus norvegicus GN=Bckdha PE=1 SV=1
Length = 441
Score = 296 bits (757), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 146/306 (47%), Positives = 194/306 (63%), Gaps = 12/306 (3%)
Query: 53 FSPGRSESTVAANQLDSLSSSDSDDDHQVLDFPGGKVGYTSEMRFIPESSEKRVPCFRVL 112
F P R + Q SL DD Q FPG + ++ FI + +P +RV+
Sbjct: 31 FHPSRQQQ----QQFPSL-----DDKPQ---FPGASAEFVDKLEFIQPNVISGIPIYRVM 78
Query: 113 DDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINI 172
D G++I S+ + +E +K+Y M L MD +LYE+QRQGR SFY+T GEE ++
Sbjct: 79 DRQGQIINPSEDPHLPQEEVLKLYRSMTLLNTMDRILYESQRQGRISFYMTNYGEEGTHV 138
Query: 173 GSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNY 232
GSAAAL D + QYRE GVL++R Y L+ F Q + N +D GKGRQMP+HYG K+ ++
Sbjct: 139 GSAAALERTDLVFGQYREAGVLMYRDYPLELFMAQCYGNVSDPGKGRQMPVHYGCKERHF 198
Query: 233 ITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVF 292
+TISSP+ATQ+PQAVG AY+ K + + Y G+G SEGD HA NFAA +E P++F
Sbjct: 199 VTISSPLATQIPQAVGAAYAAKRANANQIVICYFGEGAASEGDAHAGFNFAATLECPIIF 258
Query: 293 ICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKR 352
CRNNG+AIST SEQ+R DGI +G YGI SIRVDGND AVY A + AR A++E +
Sbjct: 259 FCRNNGYAISTPTSEQYRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQ 318
Query: 353 PVLVEV 358
P L+E
Sbjct: 319 PFLIEA 324
>sp|P50136|ODBA_MOUSE 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Mus
musculus GN=Bckdha PE=1 SV=1
Length = 442
Score = 295 bits (754), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 139/283 (49%), Positives = 187/283 (66%), Gaps = 3/283 (1%)
Query: 76 DDDHQVLDFPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKM 135
DD Q FPG + ++ FI + +P +RV+D G++I S+ + +E +K
Sbjct: 46 DDKPQ---FPGASAEFVDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEEVLKF 102
Query: 136 YSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLL 195
Y M L MD +LYE+QR+GR SFY+T GEE ++GSAAAL D + QYRE GVL+
Sbjct: 103 YRSMTLLNTMDRILYESQREGRISFYMTNYGEEGTHVGSAAALERTDLVFGQYREAGVLM 162
Query: 196 WRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKM 255
+R Y L+ F +Q + N D GKGRQMP+HYG K+ +++TISSP+ATQ+PQAVG AY+ K
Sbjct: 163 YRDYPLELFMSQCYGNVNDPGKGRQMPVHYGCKERHFVTISSPLATQIPQAVGAAYAAKR 222
Query: 256 EKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIV 315
+ + Y G+G SEGD HA NFAA +E P++F CRNNG+AIST SEQ+R DGI
Sbjct: 223 ANANRIVICYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIA 282
Query: 316 VKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEV 358
+G YGI+SIRVDGND AVY A + AR A++E +P L+E
Sbjct: 283 ARGPGYGIKSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEA 325
>sp|P11178|ODBA_BOVIN 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Bos
taurus GN=BCKDHA PE=2 SV=1
Length = 455
Score = 292 bits (747), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 136/275 (49%), Positives = 183/275 (66%)
Query: 84 FPGGKVGYTSEMRFIPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQ 143
FPG + ++ FI + +P +RV+D G++I S+ + +E +K Y M L
Sbjct: 64 FPGASAEFIDKLEFIQPNVISGIPIYRVMDRQGQIINPSEDPHLPQEKVLKFYKSMTLLN 123
Query: 144 VMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQ 203
MD +LYE+QRQGR SFY+T GEE ++GSAAAL D + QYRE GVL++R Y L+
Sbjct: 124 TMDRILYESQRQGRISFYMTNYGEEGTHVGSAAALDDTDLVFGQYREAGVLMYRDYPLEL 183
Query: 204 FANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAV 263
F Q + N +D GKGRQMP+HYG ++ +++TISSP+ATQ+PQAVG AY+ K + +
Sbjct: 184 FMAQCYGNVSDLGKGRQMPVHYGCRERHFVTISSPLATQIPQAVGAAYAAKRANANRVVI 243
Query: 264 AYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGI 323
Y G+G SEGD HA NFAA +E P++F CRNNG+AIST SEQ+R DGI +G YGI
Sbjct: 244 CYFGEGAASEGDAHAGFNFAATLECPIIFFCRNNGYAISTPTSEQYRGDGIAARGPGYGI 303
Query: 324 RSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEV 358
SIRVDGND AVY A + AR A++E +P L+E
Sbjct: 304 LSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEA 338
>sp|P37940|ODBA_BACSU 2-oxoisovalerate dehydrogenase subunit alpha OS=Bacillus subtilis
(strain 168) GN=bfmBAA PE=1 SV=1
Length = 330
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 141/234 (60%), Gaps = 2/234 (0%)
Query: 127 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSAD-DFIL 185
++ + AV MY M+ + +D ++ R G+ F ++ G+EA +G+A AL + D++L
Sbjct: 11 LTDQEAVDMYRTMLLARKIDERMWLLNRSGKIPFVISCQGQEAAQVGAAFALDREMDYVL 70
Query: 186 PQYREPGVLLWRGYTLQQFANQVFANKAD-DGKGRQMPIHYGSKKLNYITISSPIATQLP 244
P YR+ GV+L G T + FA AD + GRQMP H+G KK +T SSP+ TQ+P
Sbjct: 71 PYYRDMGVVLAFGMTAKDLMMSGFAKAADPNSGGRQMPGHFGQKKNRIVTGSSPVTTQVP 130
Query: 245 QAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTN 304
AVG+A + +MEKKD A G+G +++GDFH NFAAV + PV+F+C NN +AIS
Sbjct: 131 HAVGIALAGRMEKKDIAAFVTFGEGSSNQGDFHEGANFAAVHKLPVIFMCENNKYAISVP 190
Query: 305 ISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEV 358
+Q + I + YG+ + V+GND L VY AV+ ARE A + P L+E
Sbjct: 191 YDKQVACENISDRAIGYGMPGVTVNGNDPLEVYQAVKEARERARRGEGPTLIET 244
>sp|Q72GU1|ODBA_THET2 2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus
thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
GN=TT_C1757 PE=3 SV=1
Length = 367
Score = 180 bits (457), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/267 (40%), Positives = 148/267 (55%), Gaps = 8/267 (2%)
Query: 96 RFIPESSEKRVPCFRVLDDNGELIKGSDFQ-QVSKEVAVKMYSHMVTLQVMDSVLYEAQR 154
RF P + E R++ + GE + DF + E ++Y M+ +++D R
Sbjct: 7 RFEPFTEEP----IRLIGEEGEWL--GDFPLDLEGEKLRRLYRDMLAARMLDERYTILIR 60
Query: 155 QGRFSFYLTTIGEEAINIGSAAALSAD-DFILPQYREPGVLLWRGYTLQQFANQVFANKA 213
G+ SF G EA + A A+ D++ P YR+ G+ L G L++ Q+ A KA
Sbjct: 61 TGKTSFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHGLALALGIPLKELFGQMLATKA 120
Query: 214 DDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSE 273
D KGRQMP H GSK LN+ T++SPIA+ +P A G A S+K+ + AV GDG TSE
Sbjct: 121 DPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSE 180
Query: 274 GDFHAALNFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDA 333
GD++A +NFAAV AP VF+C NN +AIS + Q S I K A+GI VDG D
Sbjct: 181 GDWYAGINFAAVQGAPAVFVCENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDV 240
Query: 334 LAVYTAVQAAREMAISEKRPVLVEVRL 360
LA Y V+ A E A + P LVE+R+
Sbjct: 241 LASYYVVKEAVERARRGEGPSLVELRV 267
>sp|Q9I1M2|ODBA_PSEAE 2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=bkdA1 PE=3 SV=1
Length = 410
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 143/260 (55%), Gaps = 4/260 (1%)
Query: 100 ESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFS 159
E+S+ RVLDD+G + G Q+S E ++ M+ ++ D+ + AQRQ + S
Sbjct: 46 ETSDLAYSLVRVLDDDGHAV-GPWNPQLSNEQLLRGMRAMLKTRLFDARMLTAQRQKKLS 104
Query: 160 FYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGR 219
FY+ +GEEAI AL D P YR+ G+L+ R Y L Q+ +N+AD KGR
Sbjct: 105 FYMQCLGEEAIATAHTLALRDGDMCFPTYRQQGILITREYPLVDMICQLLSNEADPLKGR 164
Query: 220 QMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAA 279
Q+PI Y SK+ + +IS +ATQ QAVG + ++ A A+ GDG T+E DFH A
Sbjct: 165 QLPIMYSSKEAGFFSISGNLATQFIQAVGWGMASAIKGDTRIASAWIGDGATAESDFHTA 224
Query: 280 LNFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVV--KGRAYGIRSIRVDGNDALAVY 337
L FA V APV+ NN WAIST +G +G GI S+RVDGND LAVY
Sbjct: 225 LTFAHVYRAPVILNVVNNQWAIST-FQAIAGGEGTTFANRGVGCGIASLRVDGNDFLAVY 283
Query: 338 TAVQAAREMAISEKRPVLVE 357
A + A E A P L+E
Sbjct: 284 AASEWAAERARRNLGPSLIE 303
>sp|Q5SLR4|ODBA_THET8 2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
GN=TTHA0229 PE=1 SV=1
Length = 367
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 142/253 (56%), Gaps = 4/253 (1%)
Query: 110 RVLDDNGELIKGSDFQ-QVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEE 168
R++ + GE + DF + E ++Y M+ +++D R G+ SF G E
Sbjct: 17 RLIGEEGEWL--GDFPLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHE 74
Query: 169 AINIGSAAALSAD-DFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGS 227
A + A A+ D++ P YR+ G+ L G L++ Q+ A KAD KGRQMP H GS
Sbjct: 75 AAQVAIAHAIRPGFDWVFPYYRDHGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGS 134
Query: 228 KKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVME 287
K LN+ T++SPIA+ +P A G A S+K+ + AV GDG TSEGD++A +NFAAV
Sbjct: 135 KALNFFTVASPIASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQG 194
Query: 288 APVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMA 347
AP VFI NN +AIS + Q S I K A+GI VDG D LA Y V+ A E A
Sbjct: 195 APAVFIAENNFYAISVDYRHQTHSPTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERA 254
Query: 348 ISEKRPVLVEVRL 360
+ P LVE+R+
Sbjct: 255 RRGEGPSLVELRV 267
>sp|P60090|ODPA_STAAW Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MW2) GN=pdhA PE=3 SV=1
Length = 370
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 146/257 (56%), Gaps = 9/257 (3%)
Query: 102 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFY 161
++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY
Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 162 LTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQM 221
T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q
Sbjct: 78 APTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQF 133
Query: 222 PIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALN 281
P + +N ++ I Q QA GVA++LK K+A A+ YTGDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 282 FAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQ 341
FAA +AP +F+ +NN +AIST S+Q ++ + K A GI I+VDG DALAVY A +
Sbjct: 189 FAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATK 248
Query: 342 AAREMAISEKRPVLVEV 358
AR+ A++ + P L+E
Sbjct: 249 EARDRAVAGEGPTLIET 265
>sp|Q6GAC1|ODPA_STAAS Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MSSA476) GN=pdhA PE=3 SV=1
Length = 370
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 146/257 (56%), Gaps = 9/257 (3%)
Query: 102 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFY 161
++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY
Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 162 LTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQM 221
T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q
Sbjct: 78 APTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQF 133
Query: 222 PIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALN 281
P + +N ++ I Q QA GVA++LK K+A A+ YTGDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 282 FAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQ 341
FAA +AP +F+ +NN +AIST S+Q ++ + K A GI I+VDG DALAVY A +
Sbjct: 189 FAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATK 248
Query: 342 AAREMAISEKRPVLVEV 358
AR+ A++ + P L+E
Sbjct: 249 EARDRAVAGEGPTLIET 265
>sp|Q820A6|ODPA_STAAN Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain N315) GN=pdhA PE=1 SV=1
Length = 370
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 146/257 (56%), Gaps = 9/257 (3%)
Query: 102 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFY 161
++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY
Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 162 LTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQM 221
T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q
Sbjct: 78 APTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQF 133
Query: 222 PIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALN 281
P + +N ++ I Q QA GVA++LK K+A A+ YTGDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 282 FAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQ 341
FAA +AP +F+ +NN +AIST S+Q ++ + K A GI I+VDG DALAVY A +
Sbjct: 189 FAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATK 248
Query: 342 AAREMAISEKRPVLVEV 358
AR+ A++ + P L+E
Sbjct: 249 EARDRAVAGEGPTLIET 265
>sp|P60089|ODPA_STAAM Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=pdhA PE=1 SV=1
Length = 370
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 146/257 (56%), Gaps = 9/257 (3%)
Query: 102 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFY 161
++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY
Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 162 LTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQM 221
T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q
Sbjct: 78 APTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQF 133
Query: 222 PIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALN 281
P + +N ++ I Q QA GVA++LK K+A A+ YTGDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 282 FAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQ 341
FAA +AP +F+ +NN +AIST S+Q ++ + K A GI I+VDG DALAVY A +
Sbjct: 189 FAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATK 248
Query: 342 AAREMAISEKRPVLVEV 358
AR+ A++ + P L+E
Sbjct: 249 EARDRAVAGEGPTLIET 265
>sp|Q5HGZ1|ODPA_STAAC Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain COL) GN=pdhA PE=3 SV=1
Length = 370
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 146/257 (56%), Gaps = 9/257 (3%)
Query: 102 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFY 161
++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY
Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 162 LTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQM 221
T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q
Sbjct: 78 APTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQF 133
Query: 222 PIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALN 281
P + +N ++ I Q QA GVA++LK K+A A+ YTGDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQAAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 282 FAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQ 341
FAA +AP +F+ +NN +AIST S+Q ++ + K A GI I+VDG DALAVY A +
Sbjct: 189 FAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATK 248
Query: 342 AAREMAISEKRPVLVEV 358
AR+ A++ + P L+E
Sbjct: 249 EARDRAVAGEGPTLIET 265
>sp|Q6GHZ2|ODPA_STAAR Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MRSA252) GN=pdhA PE=3 SV=1
Length = 370
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 145/257 (56%), Gaps = 9/257 (3%)
Query: 102 SEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFY 161
++ + ++LD+NG ++ ++ E V++ MV +++D RQGR FY
Sbjct: 18 TQSKFEMVQILDENGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGFY 77
Query: 162 LTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQM 221
T G+EA + S AL +D+ILP YR+ ++W G L + F KG Q
Sbjct: 78 APTAGQEASQLASQYALEKEDYILPGYRDVPQIIWHGLPL----TEAFLFSRGHFKGNQF 133
Query: 222 PIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALN 281
P + +N ++ I Q Q GVA++LK K+A A+ YTGDGG+S+GDF+ +N
Sbjct: 134 P-----EGVNALSPQIIIGAQYIQTAGVAFALKKRGKNAVAITYTGDGGSSQGDFYEGIN 188
Query: 282 FAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQ 341
FAA +AP +F+ +NN +AIST S+Q ++ + K A GI I+VDG DALAVY A +
Sbjct: 189 FAAAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAIAVGIPGIQVDGMDALAVYQATK 248
Query: 342 AAREMAISEKRPVLVEV 358
AR+ A++ + P L+E
Sbjct: 249 EARDRAVAGEGPTLIET 265
>sp|P21873|ODPA_GEOSE Pyruvate dehydrogenase E1 component subunit alpha OS=Geobacillus
stearothermophilus GN=pdhA PE=1 SV=2
Length = 369
Score = 171 bits (434), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 102/259 (39%), Positives = 144/259 (55%), Gaps = 9/259 (3%)
Query: 100 ESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFS 159
E ++ P F++L++ GE++ ++S E ++ MV +++D RQGR
Sbjct: 15 EKVAEQFPTFQILNEEGEVVNEEAMPELSDEQLKELMRRMVYTRILDQRSISLNRQGRLG 74
Query: 160 FYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGR 219
FY T G+EA I S AL +DFILP YR+ ++W G L Q F G
Sbjct: 75 FYAPTAGQEASQIASHFALEKEDFILPGYRDVPQIIWHGLPL----YQAFLFSRGHFHGN 130
Query: 220 QMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAA 279
Q+P + +N + I Q QA GVA LKM K A A+ YTGDGGTS+GDF+
Sbjct: 131 QIP-----EGVNVLPPQIIIGAQYIQAAGVALGLKMRGKKAVAITYTGDGGTSQGDFYEG 185
Query: 280 LNFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTA 339
+NFA +AP +F+ +NN +AIST + +Q + + K A GI I+VDG D LAVY A
Sbjct: 186 INFAGAFKAPAIFVVQNNRFAISTPVEKQTVAKTLAQKAVAAGIPGIQVDGMDPLAVYAA 245
Query: 340 VQAAREMAISEKRPVLVEV 358
V+AARE AI+ + P L+E
Sbjct: 246 VKAARERAINGEGPTLIET 264
>sp|P09060|ODBA_PSEPU 2-oxoisovalerate dehydrogenase subunit alpha OS=Pseudomonas putida
GN=bkdA1 PE=1 SV=2
Length = 410
Score = 169 bits (427), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 140/249 (56%), Gaps = 2/249 (0%)
Query: 110 RVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEA 169
RVLD+ G+ +G + + ++ + M+ ++ DS + AQRQ + SFY+ ++GEEA
Sbjct: 56 RVLDEQGD-AQGPWAEDIDPQILRQGMRAMLKTRIFDSRMVVAQRQKKMSFYMQSLGEEA 114
Query: 170 INIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKK 229
I G A AL+ D P YR+ +L+ R +L + Q+ +N+ D KGRQ+PI Y ++
Sbjct: 115 IGSGQALALNRTDMCFPTYRQQSILMARDVSLVEMICQLLSNERDPLKGRQLPIMYSVRE 174
Query: 230 LNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAP 289
+ TIS +ATQ QAVG A + ++ A A+ GDG T+E DFH AL FA V AP
Sbjct: 175 AGFFTISGNLATQFVQAVGWAMASAIKGDTKIASAWIGDGATAESDFHTALTFAHVYRAP 234
Query: 290 VVFICRNNGWAIST-NISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAI 348
V+ NN WAIST S +G GI S+RVDGND +AVY A + A E A
Sbjct: 235 VILNVVNNQWAISTFQAIAGGESTTFAGRGVGCGIASLRVDGNDFVAVYAASRWAAERAR 294
Query: 349 SEKRPVLVE 357
P L+E
Sbjct: 295 RGLGPSLIE 303
>sp|Q8CPN3|ODPA_STAES Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=pdhA PE=3 SV=1
Length = 370
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 143/258 (55%), Gaps = 9/258 (3%)
Query: 101 SSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSF 160
++ + ++LD++G ++ ++ E V++ MV +++D RQGR F
Sbjct: 17 ETQSKFEMVQILDEDGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGF 76
Query: 161 YLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQ 220
Y T G+EA + S AL ++DFILP YR+ ++W G L F KG Q
Sbjct: 77 YAPTAGQEASQLASQYALESEDFILPGYRDVPQIIWHGLPL----TDAFLFSRGHFKGNQ 132
Query: 221 MPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAAL 280
P + +N ++ I Q Q GVA+ LK K+A A+ YTGDGG+S+GDF+ +
Sbjct: 133 FP-----EGVNALSPQIIIGAQYIQTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGI 187
Query: 281 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAV 340
NFA+ +AP +F+ +NN +AIST S+Q ++ + K + GI I+VDG DALAVY A
Sbjct: 188 NFASAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAISVGIPGIQVDGMDALAVYQAT 247
Query: 341 QAAREMAISEKRPVLVEV 358
ARE A++ + P ++E
Sbjct: 248 LEARERAVAGEGPTVIET 265
>sp|Q5HQ76|ODPA_STAEQ Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=pdhA PE=3
SV=1
Length = 370
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 143/258 (55%), Gaps = 9/258 (3%)
Query: 101 SSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSF 160
++ + ++LD++G ++ ++ E V++ MV +++D RQGR F
Sbjct: 17 ETQSKFEMVQILDEDGNVVNEDLVPDLTDEQLVELMERMVWTRILDQRSISLNRQGRLGF 76
Query: 161 YLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQ 220
Y T G+EA + S AL ++DFILP YR+ ++W G L F KG Q
Sbjct: 77 YAPTAGQEASQLASQYALESEDFILPGYRDVPQIIWHGLPL----TDAFLFSRGHFKGNQ 132
Query: 221 MPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAAL 280
P + +N ++ I Q Q GVA+ LK K+A A+ YTGDGG+S+GDF+ +
Sbjct: 133 FP-----EGVNALSPQIIIGAQYIQTAGVAFGLKKRGKNAVAITYTGDGGSSQGDFYEGI 187
Query: 281 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAV 340
NFA+ +AP +F+ +NN +AIST S+Q ++ + K + GI I+VDG DALAVY A
Sbjct: 188 NFASAYKAPAIFVIQNNNYAISTPRSKQTAAETLAQKAISVGIPGIQVDGMDALAVYQAT 247
Query: 341 QAAREMAISEKRPVLVEV 358
ARE A++ + P ++E
Sbjct: 248 LEARERAVAGEGPTVIET 265
>sp|Q4MTG0|ODPA_BACCE Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus
cereus GN=pdhA PE=1 SV=3
Length = 371
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 95/257 (36%), Positives = 140/257 (54%), Gaps = 10/257 (3%)
Query: 108 CFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGE 167
++L++ GE++ + ++S + ++ MV +V+D RQGR FY T G+
Sbjct: 25 TLQILNEKGEVVNEAAMPELSDDQLKELMRRMVYTRVLDQRSISLNRQGRLGFYAPTAGQ 84
Query: 168 EAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGS 227
EA + S AL A+DFILP YR+ L+W G L Q F G QMP
Sbjct: 85 EASQLASHFALEAEDFILPGYRDVPQLVWHGLPLYQ----AFLFSRGHFMGNQMP----- 135
Query: 228 KKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVME 287
+ +N + I Q+ Q GVA +K+ K + A+ YTGDGG S+GDF+ +NFA +
Sbjct: 136 ENVNALAPQIIIGAQIIQTAGVALGMKLRGKKSVAITYTGDGGASQGDFYEGMNFAGAFK 195
Query: 288 APVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMA 347
AP +F+ +NN +AIST + +Q + + K A GI I+VDG D LAVY A ARE A
Sbjct: 196 APAIFVVQNNRYAISTPVEKQSAAKTVAQKAVAAGIYGIQVDGMDPLAVYAATAFARERA 255
Query: 348 ISEKRPVLVEVRLNFLW 364
++ + P L+E L F +
Sbjct: 256 VNGEGPTLIET-LTFRY 271
>sp|P21881|ODPA_BACSU Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus
subtilis (strain 168) GN=pdhA PE=1 SV=3
Length = 371
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 142/262 (54%), Gaps = 10/262 (3%)
Query: 103 EKRVPCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYL 162
+K+ F++L++ GE++ + ++ + ++ MV +V+D RQGR FY
Sbjct: 20 KKQFETFQILNEKGEVVNEAAMPDLTDDQLKELMRRMVFTRVLDQRSISLNRQGRLGFYA 79
Query: 163 TTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMP 222
T G+EA I + AL +DF+LP YR+ L+W G L Q F +G QMP
Sbjct: 80 PTAGQEASQIATHFALEKEDFVLPGYRDVPQLIWHGLPL----YQAFLFSRGHFRGNQMP 135
Query: 223 IHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNF 282
+N ++ I Q Q GVA LK K A A+ YTGDGG S+GDF+ +NF
Sbjct: 136 -----DDVNALSPQIIIGAQYIQTAGVALGLKKRGKKAVAITYTGDGGASQGDFYEGINF 190
Query: 283 AAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQA 342
A +AP +F+ +NN +AIST + +Q ++ I K A GI ++VDG D LAVY A
Sbjct: 191 AGAYKAPAIFVVQNNRYAISTPVEKQSAAETIAQKAVAAGIVGVQVDGMDPLAVYAATAE 250
Query: 343 AREMAISEKRPVLVEVRLNFLW 364
ARE AI+ + P L+E L F +
Sbjct: 251 ARERAINGEGPTLIET-LTFRY 271
>sp|O06161|BKDA_MYCTU 3-methyl-2-oxobutanoate dehydrogenase subunit alpha
OS=Mycobacterium tuberculosis GN=bkdA PE=1 SV=1
Length = 367
Score = 145 bits (366), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 119/238 (50%), Gaps = 19/238 (7%)
Query: 125 QQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFI 184
+ + +E +Y MV + +D+ QRQG + Y G+EA +G+AA L D++
Sbjct: 37 RDLPEETLRWLYEMMVVTRELDTEFVNLQRQGELALYTPCRGQEAAQVGAAACLRKTDWL 96
Query: 185 LPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYIT-----ISSPI 239
PQYRE GV L RG G + H G L + T +S PI
Sbjct: 97 FPQYRELGVYLVRGIPPGHV-----------GVAWRGTWHGG---LQFTTKCCAPMSVPI 142
Query: 240 ATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGW 299
TQ AVG A + + +D+ VA+ GDG TSEGD H ALNFAAV P VF +NN W
Sbjct: 143 GTQTLHAVGAAMAAQRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYVQNNQW 202
Query: 300 AISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVE 357
AIS +S Q + I K YG+ IRVDGND LA Y + A A + P L+E
Sbjct: 203 AISMPVSRQTAAPSIAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPTLIE 260
>sp|P35485|ODPA_ACHLA Pyruvate dehydrogenase E1 component subunit alpha (Fragment)
OS=Acholeplasma laidlawii GN=pdhA PE=4 SV=1
Length = 345
Score = 141 bits (356), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 130/245 (53%), Gaps = 9/245 (3%)
Query: 113 DDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINI 172
D NG+++ ++ KE +KMY V + D + QRQGR Y +G+EA I
Sbjct: 1 DQNGKVVNEKMEPKLPKETLLKMYKTAVLGRNADIKALQYQRQGRMLTYAPNMGQEAAQI 60
Query: 173 GSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNY 232
G AAA+ D+ P YRE LL+RG L+ VF + +G P + +
Sbjct: 61 GMAAAMEPQDWNSPMYRELNTLLYRGDKLEN----VFLYWYGNERGSIKP-----EGVKI 111
Query: 233 ITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVF 292
+ + I +Q A G+A + K+ K + GDGGT+ G+F+ LNFAA +APVV
Sbjct: 112 LPTNIIIGSQSNIAAGLAMASKIRKTNEVTAFTIGDGGTAHGEFYEGLNFAASFKAPVVA 171
Query: 293 ICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKR 352
+ +NN WAIST + + S+ + KG A+GI I+VDGND LA+Y A + A + A
Sbjct: 172 VIQNNQWAISTPVRKASNSETLAQKGVAFGIPYIQVDGNDMLAMYVASKEAMDRARKGDG 231
Query: 353 PVLVE 357
P L+E
Sbjct: 232 PTLIE 236
>sp|P47516|ODPA_MYCGE Pyruvate dehydrogenase E1 component subunit alpha OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=pdhA PE=3 SV=1
Length = 358
Score = 131 bits (330), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 133/257 (51%), Gaps = 11/257 (4%)
Query: 103 EKRVPC--FRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSF 160
+ +VP ++V D+ G+LI + ++ E Y M ++MD + QR G+
Sbjct: 6 KNKVPTTLYQVYDNEGKLIDPNHKITLTDEQLKHAYYLMNLSRMMDKKMLVWQRAGKMLN 65
Query: 161 YLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQ 220
+ +GEEA+ +G L+ +D++ P +R ++L+RG +Q N+ KG Q
Sbjct: 66 FAPNLGEEALQVGMGLGLNENDWVCPTFRSGALMLYRGVKPEQLLLYWNGNE----KGSQ 121
Query: 221 MPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAAL 280
+ Y + +N ITI + Q A G+ Y L +K+ AV GDGGT+EG+F+ A+
Sbjct: 122 IDAKYKTLPIN-ITIGA----QYSHAAGLGYMLHYKKQPNVAVTMIGDGGTAEGEFYEAM 176
Query: 281 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAV 340
N A++ + VF NN +AIST + + VK A GI +RVDGND +A Y A+
Sbjct: 177 NIASIHKWNTVFCINNNQFAISTRTKLESAVSDLSVKAIACGIPRVRVDGNDLIASYEAM 236
Query: 341 QAAREMAISEKRPVLVE 357
Q A A PVL+E
Sbjct: 237 QDAANYARGGNGPVLIE 253
>sp|P75390|ODPA_MYCPN Pyruvate dehydrogenase E1 component subunit alpha OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=pdhA PE=3 SV=1
Length = 358
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 129/264 (48%), Gaps = 14/264 (5%)
Query: 103 EKRVPC--FRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFSF 160
+ +VP ++V D+ G+L+ + +S E + M ++MD + QR G+
Sbjct: 6 KNKVPTTLYQVYDNEGKLMDPNHKITLSNEQLKHAFYLMNLSRIMDKKMLVWQRAGKMLN 65
Query: 161 YLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQ 220
+ +GEEA+ +G L+ +D+ P +R ++L+RG +Q ++ N ++G +
Sbjct: 66 FAPNLGEEALQVGMGMGLNENDWFCPTFRSGALMLYRGVKPEQLL--LYWNGNENGSKIE 123
Query: 221 MPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAAL 280
K + I+ I Q A G+ Y L +K AV GDGGT+EG+F+ A+
Sbjct: 124 -------AKYKTLPINITIGAQYSHAAGLGYMLHYKKLPNVAVTMIGDGGTAEGEFYEAM 176
Query: 281 NFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAV 340
N A++ + VF NN +AIST + + K A I IRVDGND +A Y A+
Sbjct: 177 NIASIHKWNSVFCINNNQFAISTRTKLESAVSDLSTKAIAVNIPRIRVDGNDLIASYEAM 236
Query: 341 QAAREMAISEKRPVLVEVRLNFLW 364
A A S PVL+E F W
Sbjct: 237 HEAANYARSGNGPVLIEF---FSW 257
>sp|O31404|ACOA_BACSU Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha
OS=Bacillus subtilis (strain 168) GN=acoA PE=2 SV=2
Length = 333
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 107/233 (45%), Gaps = 1/233 (0%)
Query: 127 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRF-SFYLTTIGEEAINIGSAAALSADDFIL 185
+++E A+ MY M+ ++ + ++E QG F GEEA+ +G A L D I
Sbjct: 11 LTEEKALWMYQKMLEIRGFEDKVHELFAQGVLPGFVHLYAGEEAVAVGVCAHLHDGDSIT 70
Query: 186 PQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQ 245
+R G + +G L ++F KG+ +H + + +
Sbjct: 71 STHRGHGHCIAKGCDLDGMMAEIFGKATGLCKGKGGSMHIADLDKGMLGANGIVGGGFTL 130
Query: 246 AVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNI 305
A G A + K ++ +V + GDG ++G FH LN AAV PVVF+ NNG+ +T
Sbjct: 131 ACGSALTAKYKQTKNVSVCFFGDGANNQGTFHEGLNLAAVWNLPVVFVAENNGYGEATPF 190
Query: 306 SEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEV 358
D I + AY + + VDG D LAVY A + A E A + P L+E
Sbjct: 191 EYASACDSIADRAAAYNMPGVTVDGKDILAVYQAAEEAIERARNGGGPSLIEC 243
>sp|P52901|ODPA1_ARATH Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
OS=Arabidopsis thaliana GN=E1 ALPHA PE=1 SV=2
Length = 389
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 115/220 (52%), Gaps = 5/220 (2%)
Query: 139 MVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRG 198
M +++ LY+A+ F G+EA+ IG AA++ D I+ YR+ + L RG
Sbjct: 69 MRRMEIAADSLYKAKLIRGFCHLYD--GQEAVAIGMEAAITKKDAIITAYRDHCIFLGRG 126
Query: 199 YTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKK 258
+L + +++ +A KG+ +H+ K+ ++ + Q+P G+A++ K K+
Sbjct: 127 GSLHEVFSELMGRQAGCSKGKGGSMHFYKKESSFYGGHGIVGAQVPLGCGIAFAQKYNKE 186
Query: 259 DACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKG 318
+A A GDG ++G ALN +A+ + P + +C NN + + T +S +G
Sbjct: 187 EAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTAEWRAAKSPSYYKRG 246
Query: 319 RAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEV 358
+ ++VDG DA AV A + A++ A+ EK P+++E+
Sbjct: 247 DY--VPGLKVDGMDAFAVKQACKFAKQHAL-EKGPIILEM 283
>sp|P26267|ODPA_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type I,
mitochondrial OS=Ascaris suum PE=1 SV=1
Length = 396
Score = 103 bits (256), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 124/247 (50%), Gaps = 12/247 (4%)
Query: 117 ELIKGSDFQ-QVSKEVAVKMYSHMVTLQVMDSV---LYEAQRQGRFSFYLTTIGEEAINI 172
+L G D V+KE AV Y+ M+T++ M+S LY+ ++ F + G+EA +
Sbjct: 41 KLDSGPDINVHVTKEDAVHYYTQMLTIRRMESAAGNLYKEKKVRGFCHLYS--GQEACAV 98
Query: 173 GSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIH-YGSKKLN 231
G+ AA+ A D + YR G G ++ + ++ + G+ +H YG N
Sbjct: 99 GTKAAMDAGDAAVTAYRCHGWTYLSGSSVAKVLCELTGRITGNVYGKGGSMHMYGE---N 155
Query: 232 YITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVV 291
+ + + Q P G+A+++K K+ + GDG T++G ++N A + + PV+
Sbjct: 156 FYGGNGIVGAQQPLGTGIAFAMKYRKEKNVCITMFGDGATNQGQLFESMNMAKLWDLPVL 215
Query: 292 FICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEK 351
++C NNG+ + T + S +G + I VDG D LAV AV+ A+E + K
Sbjct: 216 YVCENNGYGMGTAAARSSASTDYYTRGDY--VPGIWVDGMDVLAVRQAVRWAKEWCNAGK 273
Query: 352 RPVLVEV 358
P+++E+
Sbjct: 274 GPLMIEM 280
>sp|P16387|ODPA_YEAST Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PDA1 PE=1 SV=2
Length = 420
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 120/241 (49%), Gaps = 21/241 (8%)
Query: 126 QVSKEVAVKMYSHMVTLQVMD---SVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADD 182
+ SK ++MY MV ++ M+ LY+A++ F ++G+EAI +G A++ D
Sbjct: 75 ETSKATLLQMYKDMVIIRRMEMACDALYKAKKIRGFCH--LSVGQEAIAVGIENAITKLD 132
Query: 183 FILPQYREPGVLLWRGYTLQQFANQVFANKA--DDGKGRQM----PIHYGSKKLNYITIS 236
I+ YR G RG +++ ++ +A GKG M P YG +
Sbjct: 133 SIITSYRCHGFTFMRGASVKAVLAELMGRRAGVSYGKGGSMHLYAPGFYGGNGI------ 186
Query: 237 SPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRN 296
+ Q+P G+A++ + + +DAC+ GDG +++G + N A + PVVF C N
Sbjct: 187 --VGAQVPLGAGLAFAHQYKNEDACSFTLYGDGASNQGQVFESFNMAKLWNLPVVFCCEN 244
Query: 297 NGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLV 356
N + + T S +G+ I ++V+G D LAVY A + A++ +S K P+++
Sbjct: 245 NKYGMGTAASRSSAMTEYFKRGQY--IPGLKVNGMDILAVYQASKFAKDWCLSGKGPLVL 302
Query: 357 E 357
E
Sbjct: 303 E 303
>sp|O66112|ODPA_ZYMMO Pyruvate dehydrogenase E1 component subunit alpha OS=Zymomonas
mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
GN=pdhA PE=3 SV=1
Length = 354
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 1/202 (0%)
Query: 159 SFYLTTIGEEAINIGSAAALS-ADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGK 217
F IG+EA+ +G AAL D ++ YRE G +L G + ++ +
Sbjct: 67 GFCHLYIGQEAVAVGLQAALQPGRDSVITGYREHGHMLAYGIDPKIVMAELTGRASGISH 126
Query: 218 GRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFH 277
G+ +H S + + + + Q+P G+A++ K C+ AY GDG ++G +
Sbjct: 127 GKGGSMHMFSTEHKFFGGNGIVGAQVPLGAGLAFAHKYRNDGGCSAAYFGDGSANQGQVY 186
Query: 278 AALNFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVY 337
A N AA+ + PV+F+ NNG+A+ T+I + +G +GI ++ VDG D L V
Sbjct: 187 EAYNMAALWKLPVIFVIENNGYAMGTSIQRANAHTALSERGAGFGIPALVVDGMDVLEVR 246
Query: 338 TAVQAAREMAISEKRPVLVEVR 359
A A + + K P+++E++
Sbjct: 247 GAATVAVDWVQAGKGPIILEMK 268
>sp|O13366|ODPA_KLULA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PDA1 PE=3
SV=2
Length = 412
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 121/247 (48%), Gaps = 33/247 (13%)
Query: 126 QVSKEVAVKMYSHMVTLQVMD---SVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADD 182
Q +K ++MY M+ ++ M+ LY+A++ F +++G+EAI +G A++ D
Sbjct: 67 QTTKSNLLQMYKDMIIVRRMEMACDALYKAKKIRGFCH--SSVGQEAIAVGIENAITKRD 124
Query: 183 FILPQYREPGVLLWRGYTLQQFANQVFANKA--DDGKGRQM----PIHYGSKKLNYITIS 236
++ YR G RG +Q ++ + GKG M P YG +
Sbjct: 125 TVITSYRCHGFTYMRGAAVQAVLAELMGRRTGVSFGKGGSMHLYAPGFYGGNGI------ 178
Query: 237 SPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRN 296
+ Q+P G+A++ + + +DAC+ A GDG +++G + N A + P VF C N
Sbjct: 179 --VGAQVPLGAGLAFAHQYKHEDACSFALYGDGASNQGQVFESFNMAKLWNLPAVFCCEN 236
Query: 297 NGWAI------STNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISE 350
N + + S+ ++E F+ R I ++V+G D LAVY A + A++ +S
Sbjct: 237 NKYGMGTAAARSSAMTEYFK--------RGQYIPGLKVNGMDILAVYQASKFAKDWTVSG 288
Query: 351 KRPVLVE 357
P+++E
Sbjct: 289 NGPIVLE 295
>sp|O24457|ODPA3_ARATH Pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic
OS=Arabidopsis thaliana GN=PDH-E1 ALPHA PE=1 SV=1
Length = 428
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 114/238 (47%), Gaps = 7/238 (2%)
Query: 127 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGR-FSFYLTTIGEEAINIGSAAALSADDFIL 185
++KE +++Y M+ + + + + +G+ F F G+EA++ G L+ D ++
Sbjct: 79 ITKEEGLELYEDMILGRSFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLTKSDSVV 138
Query: 186 PQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQ 245
YR+ L +G + + +++F +G+ +H SK+ N + + I +P
Sbjct: 139 STYRDHVHALSKGVSARAVMSELFGKVTGCCRGQGGSMHMFSKEHNMLGGFAFIGEGIPV 198
Query: 246 AVGVAYSLKMEKK------DACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGW 299
A G A+S K ++ D VA+ GDG + G F LN AA+ + P++F+ NN W
Sbjct: 199 ATGAAFSSKYRREVLKQDCDDVTVAFFGDGTCNNGQFFECLNMAALYKLPIIFVVENNLW 258
Query: 300 AISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVE 357
AI + I KG A+G+ + VDG D L V + A A + P LVE
Sbjct: 259 AIGMSHLRATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAVTRARRGEGPTLVE 316
>sp|Q54C70|ODPA_DICDI Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=pdhA PE=1 SV=1
Length = 377
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 119/240 (49%), Gaps = 9/240 (3%)
Query: 122 SDFQQVSKEVAVKMYSHMVTLQVMDSV---LYEAQRQGRFSFYLTTIGEEAINIGSAAAL 178
SD +K+ + ++ M + +++V LY+ + F T G+EA+ G +A+
Sbjct: 42 SDSTVTNKDELISFFTEMSRFRRLETVCDGLYKKKLIRGFCHLYT--GQEAVCAGLESAI 99
Query: 179 SADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSP 238
+ DD I+ YR+ +L RG T ++ ++ + KG+ +H +K N+ +
Sbjct: 100 TKDDHIITAYRDHTYMLSRGATPEEIFAELLMKETGCSKGKGGSMHMFTK--NFYGGNGI 157
Query: 239 IATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNG 298
+ Q P G+A++ K K +A GDG ++G A N A++ + PV+FIC NN
Sbjct: 158 VGAQCPLGAGIAFAQKYNKTGNVCLAMYGDGAANQGQLFEAFNMASLWKLPVIFICENNK 217
Query: 299 WAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEV 358
+ + T S++ + G R + + ++VDG D AV A + A E + P+++E+
Sbjct: 218 YGMGT--SQKRSTAGHDFYTRGHYVAGLKVDGMDVFAVKEAGKYAAEWCRAGNGPIILEM 275
>sp|Q10489|ODPA_SCHPO Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pda1 PE=1 SV=1
Length = 409
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 128/270 (47%), Gaps = 21/270 (7%)
Query: 98 IPESSEKRVPCFRVLDDNGELIKGSDFQQVSKEVAVK------MYSHMVTLQVMD---SV 148
+PE +K P LDD+ + +G S E+ V +Y MVT++ ++
Sbjct: 42 VPEEHDKPFPV--KLDDS--VFEGYKIDVPSTEIEVTKGELLGLYEKMVTIRRLELACDA 97
Query: 149 LYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQV 208
LY+A++ F +IG+EA+ G A++ DD I+ YR G RG +++ ++
Sbjct: 98 LYKAKKIRGFCH--LSIGQEAVAAGIEGAITLDDSIITSYRCHGFAYTRGLSIRSIIGEL 155
Query: 209 FANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGD 268
+ KG+ +H +K N+ + + Q+P G+ ++ K +K A GD
Sbjct: 156 MGRQCGASKGKGGSMHIFAK--NFYGGNGIVGAQIPLGAGIGFAQKYLEKPTTTFALYGD 213
Query: 269 GGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIV-VKGRAYGIRSIR 327
G +++G A N A + PV+F C NN + + T+ RS + R I +
Sbjct: 214 GASNQGQAFEAFNMAKLWGLPVIFACENNKYGMGTSAE---RSSAMTEFYKRGQYIPGLL 270
Query: 328 VDGNDALAVYTAVQAAREMAISEKRPVLVE 357
V+G D LAV A + A++ + +P+L+E
Sbjct: 271 VNGMDVLAVLQASKFAKKYTVENSQPLLME 300
>sp|P52903|ODPA_SOLTU Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Solanum tuberosum PE=1 SV=1
Length = 391
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 112/225 (49%), Gaps = 5/225 (2%)
Query: 134 KMYSHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGV 193
K + M +++ LY+A+ F G+EA+ +G AA++ D I+ YR+ +
Sbjct: 66 KDMTEMRRMEIAADSLYKAKLIRGFCHLYD--GQEAVAVGMEAAITKKDCIITAYRDHCI 123
Query: 194 LLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSL 253
L RG TL + ++ + +G+ +H+ K+ + + Q+P +G+A++
Sbjct: 124 FLGRGGTLVEAFAELMGRRDGCSRGKGGSMHFYKKESGFYGGHGIVGAQVPLGIGLAFAQ 183
Query: 254 KMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNISEQFRSDG 313
K +K+D A GDG ++G ALN AA+ + P + +C NN + + T +S
Sbjct: 184 KYKKEDYVTFAMYGDGAANQGQLFEALNMAALWDLPAILVCENNHYGMGTAEWRAAKSPA 243
Query: 314 IVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEV 358
+G + +RVDG D AV A A++ A+ + P+++E+
Sbjct: 244 YYKRGDY--VPGLRVDGMDVFAVKQACTFAKQHAL-KNGPIILEM 285
>sp|P26268|ODPT_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type II,
mitochondrial (Fragment) OS=Ascaris suum PE=2 SV=1
Length = 391
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 118/237 (49%), Gaps = 11/237 (4%)
Query: 126 QVSKEVAVKMYSHMVTLQVMDSV---LYEAQRQGRFSFYLTTIGEEAINIGSAAALSADD 182
V+KE A++ Y+ M T++ M++ LY+ ++ F + G+EA +G AA+ D
Sbjct: 46 HVTKEDALRYYTQMQTIRRMETAAGNLYKEKKVRGFCHLYS--GQEACAVGMKAAMEPGD 103
Query: 183 FILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIH-YGSKKLNYITISSPIAT 241
+ YR G G + + ++ + G+ +H YG N+ + +
Sbjct: 104 AAITAYRCHGWTYLSGSPVAKVLCELTGRITGNVYGKGGSMHMYGE---NFYGGNGIVGA 160
Query: 242 QLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAI 301
Q P G+A+++K +K+ + GDG T++G + ++N A + E PV+++C NNG+ +
Sbjct: 161 QQPLGTGIAFAMKYKKQKNVCITLFGDGATNQGQLYESMNMAKLWELPVLYVCENNGYGM 220
Query: 302 STNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEV 358
T+ + S +G + VDG D LAV A++ +E + K P+++E+
Sbjct: 221 GTSAARSSASTDYYTRGDY--VPGFWVDGMDVLAVRQAIRWGKEWCNAGKGPLMIEM 275
>sp|A7MB35|ODPA_BOVIN Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Bos taurus GN=PDHA1 PE=2 SV=1
Length = 390
Score = 97.4 bits (241), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 5/234 (2%)
Query: 127 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRF-SFYLTTIGEEAINIGSAAALSADDFIL 185
+++E +K Y M T++ M+ + +Q F G+EA +G A ++ D ++
Sbjct: 56 LTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLI 115
Query: 186 PQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQ 245
YR G RG ++++ ++ + KG+ +H +K N+ + + Q+P
Sbjct: 116 TAYRAHGFTFTRGLSVREILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPL 173
Query: 246 AVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNI 305
G+A + K KD + GDG ++G A N AA+ + P +FIC NN + + T++
Sbjct: 174 GAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSV 233
Query: 306 SEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEVR 359
S +G I +RVDG D L V A + A S K P+L+E++
Sbjct: 234 ERAAASTDYYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQ 285
>sp|Q8H1Y0|ODPA2_ARATH Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial
OS=Arabidopsis thaliana GN=IAR4 PE=1 SV=2
Length = 393
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 109/222 (49%), Gaps = 5/222 (2%)
Query: 137 SHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLW 196
+ M +++ LY+A+ F G+EA+ +G AA++ D I+ YR+ +
Sbjct: 71 ARMRRMEIAADSLYKAKLIRGFCHLYD--GQEALAVGMEAAITKKDAIITSYRDHCTFIG 128
Query: 197 RGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKME 256
RG L +++ K G+ +H+ K ++ + Q+P G+A++ K
Sbjct: 129 RGGKLVDAFSELMGRKTGCSHGKGGSMHFYKKDASFYGGHGIVGAQIPLGCGLAFAQKYN 188
Query: 257 KKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVV 316
K +A A GDG ++G ALN +A+ + P + +C NN + + T +S
Sbjct: 189 KDEAVTFALYGDGAANQGQLFEALNISALWDLPAILVCENNHYGMGTATWRSAKSPAYFK 248
Query: 317 KGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEV 358
+G + ++VDG DALAV A + A+E A+ + P+++E+
Sbjct: 249 RGDY--VPGLKVDGMDALAVKQACKFAKEHAL-KNGPIILEM 287
>sp|P52899|ODPA_CAEEL Probable pyruvate dehydrogenase E1 component subunit alpha,
mitochondrial OS=Caenorhabditis elegans GN=T05H10.6 PE=2
SV=1
Length = 397
Score = 97.1 bits (240), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 15/256 (5%)
Query: 107 PCFRVLDDNGELIKGSDFQQVSKEVAVKMYSHMVTLQVMDSV---LYEAQRQGRFSFYLT 163
PC DNG + +++E A+K Y M ++ M+S LY+ ++ F +
Sbjct: 34 PCKLHKLDNGP----NTSVTLNREDALKYYRDMQVIRRMESAAGNLYKEKKIRGFCHLYS 89
Query: 164 TIGEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPI 223
G+EA +G AA++ D ++ YR G G T+ + ++ A + G+ +
Sbjct: 90 --GQEACAVGMKAAMTEGDAVITAYRCHGWTWLLGATVTEVLAELTGRVAGNVHGKGGSM 147
Query: 224 HYGSKKLNYITISSPIATQLPQAVGVAYSLKM-EKKDACAVAYTGDGGTSEGDFHAALNF 282
H +K N+ + + Q P GVA ++K E+K+ C Y GDG ++G A N
Sbjct: 148 HMYTK--NFYGGNGIVGAQQPLGAGVALAMKYREQKNVCVTLY-GDGAANQGQLFEATNM 204
Query: 283 AAVMEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQA 342
A + + PV+F+C NNG+ + T S +G + I VDG D LAV A +
Sbjct: 205 AKLWDLPVLFVCENNGFGMGTTAERSSASTEYYTRGDY--VPGIWVDGMDILAVREATKW 262
Query: 343 AREMAISEKRPVLVEV 358
A+E S K P+++E+
Sbjct: 263 AKEYCDSGKGPLMMEM 278
>sp|P26284|ODPA_RAT Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Rattus norvegicus GN=Pdha1 PE=1 SV=2
Length = 390
Score = 96.3 bits (238), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 5/234 (2%)
Query: 127 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRF-SFYLTTIGEEAINIGSAAALSADDFIL 185
+++E +K Y M T++ M+ + +Q F G+EA +G A ++ D ++
Sbjct: 56 LTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLI 115
Query: 186 PQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQ 245
YR G RG+ ++ ++ + KG+ +H +K N+ + + Q+P
Sbjct: 116 TAYRAHGFTFNRGHAVRAILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPL 173
Query: 246 AVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNI 305
G+A + K KD + GDG ++G A N AA+ + P +FIC NN + + T++
Sbjct: 174 GAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSV 233
Query: 306 SEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEVR 359
S +G I +RVDG D L V A + A S K P+L+E++
Sbjct: 234 ERAAASTDYYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQ 285
>sp|Q9R9N5|ODPA_RHIME Pyruvate dehydrogenase E1 component subunit alpha OS=Rhizobium
meliloti (strain 1021) GN=pdhA PE=3 SV=1
Length = 348
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 116/239 (48%), Gaps = 1/239 (0%)
Query: 121 GSDFQQVSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRFS-FYLTTIGEEAINIGSAAALS 179
G + SKE +K Y M+ ++ + + G F IG+EA+ +G AL
Sbjct: 25 GGTIAEFSKEDDLKAYREMLLIRRFEEKAGQLYGMGFIGGFCHLYIGQEAVVVGMQLALK 84
Query: 180 ADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPI 239
D ++ YR+ G +L G + + ++ + KG+ +H SK+ ++ +
Sbjct: 85 EGDQVITGYRDHGHMLACGMSARGVMAELTGRRGGLSKGKGGSMHMFSKEKHFYGGHGIV 144
Query: 240 ATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGW 299
Q+ G+A++ + D ++AY GDG ++G + + N AA+ + PV++I NN +
Sbjct: 145 GAQVSLGTGLAFANRYRGNDNVSLAYFGDGAANQGQVYESFNMAALWKLPVIYIVENNRY 204
Query: 300 AISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEV 358
A+ T++S +G ++GI +VDG D AV A A E S K P+++E+
Sbjct: 205 AMGTSVSRASAQTDFSQRGASFGIPGYQVDGMDVRAVKAAADEAVEHCRSGKGPIILEM 263
>sp|P51267|ODPA_PORPU Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra
purpurea GN=pdhA PE=3 SV=1
Length = 344
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 8/239 (3%)
Query: 127 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGR-FSFYLTTIGEEAINIGSAAALSADDFIL 185
++K + +Y M+ + + + + +G+ F F G+EA++ G L + D++
Sbjct: 19 LTKHKLLVLYEDMLLGRNFEDMCAQMYYKGKMFGFVHLYNGQEAVSTGVIKLLDSKDYVC 78
Query: 186 PQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQ 245
YR+ L +G Q ++F + +GR +H S N++ + IA +P
Sbjct: 79 STYRDHVHALSKGVPSQNVMAELFGKETGCSRGRGGSMHIFSAPHNFLGGFAFIAEGIPV 138
Query: 246 AVGVAYS-------LKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNG 298
A G A+ LK + + GDG T+ G F LN A + + P++F+ NN
Sbjct: 139 ATGAAFQSIYRQQVLKEPGELRVTACFFGDGTTNNGQFFECLNMAVLWKLPIIFVVENNQ 198
Query: 299 WAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVE 357
WAI I K A+G+ I VDG D LAV + A E A + P L+E
Sbjct: 199 WAIGMAHHRSSSIPEIHKKAEAFGLPGIEVDGMDVLAVRQVAEKAVERARQGQGPTLIE 257
>sp|P52902|ODPA_PEA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Pisum sativum PE=2 SV=1
Length = 397
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 3/193 (1%)
Query: 166 GEEAINIGSAAALSADDFILPQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHY 225
G+EA+ +G A + D I+ YR+ L RG TL + ++ + KG+ +H+
Sbjct: 102 GQEAVAVGMEAGTTKKDCIITAYRDHCTFLGRGGTLLRVYAELMGRRDGCSKGKGGSMHF 161
Query: 226 GSKKLNYITISSPIATQLPQAVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAV 285
K + + Q+P G+A+ K K ++ A GDG ++G ALN +A+
Sbjct: 162 YKKDSGFYGGHGIVGAQVPLGCGLAFGQKYLKDESVTFALYGDGAANQGQLFEALNISAL 221
Query: 286 MEAPVVFICRNNGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAARE 345
+ P + +C NN + + T +S +G + ++VDG DALAV A + A+E
Sbjct: 222 WDLPAILVCENNHYGMGTATWRSAKSPAYFKRGDY--VPGLKVDGMDALAVKQACKFAKE 279
Query: 346 MAISEKRPVLVEV 358
A+ + P+++E+
Sbjct: 280 HAL-KNGPIILEM 291
>sp|P35486|ODPA_MOUSE Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Mus musculus GN=Pdha1 PE=1 SV=1
Length = 390
Score = 95.1 bits (235), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 5/234 (2%)
Query: 127 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRF-SFYLTTIGEEAINIGSAAALSADDFIL 185
+++E +K Y M T++ M+ + +Q F G+EA +G A ++ D ++
Sbjct: 56 LTREDGLKYYRMMQTVRRMELKADQLYKQKIIRGFCHLCDGQEACCVGLEAGINPTDHLI 115
Query: 186 PQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQ 245
YR G RG ++ ++ + KG+ +H +K N+ + + Q+P
Sbjct: 116 TAYRAHGFTFTRGLPVRAILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPL 173
Query: 246 AVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNI 305
G+A + K KD + GDG ++G A N AA+ + P +FIC NN + + T++
Sbjct: 174 GAGIALACKYNGKDEVCLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSV 233
Query: 306 SEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEVR 359
S +G I +RVDG D L V A + A S K P+L+E++
Sbjct: 234 ERAAASTDYYKRGDF--IPGLRVDGMDILCVREATKFAAAYCRSGKGPILMELQ 285
>sp|Q7XTJ3|ODPA3_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic
OS=Oryza sativa subsp. japonica GN=Os04g0119400 PE=2
SV=2
Length = 425
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 10/241 (4%)
Query: 127 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGR-FSFYLTTIGEEAINIGSAAALSADDFIL 185
V++E A+++Y MV ++ + + + +G+ F F G+EA++ G L+ D ++
Sbjct: 73 VTREEALELYEDMVLGRIFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLNQADCVV 132
Query: 186 PQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQ 245
YR+ L +G + ++F +G+ +H S+ N + + I +P
Sbjct: 133 STYRDHVHALSKGVPARSVMAELFGKATGCCRGQGGSMHMFSEPHNLLGGFAFIGEGIPV 192
Query: 246 AVGVAYS-------LKMEKKDACAV--AYTGDGGTSEGDFHAALNFAAVMEAPVVFICRN 296
A G A++ LK D V A+ GDG + G F LN A + + P+VF+ N
Sbjct: 193 ATGAAFAAKYRHEVLKQSSPDGLDVTLAFFGDGTCNNGQFFECLNMAQLWKLPIVFVVEN 252
Query: 297 NGWAISTNISEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLV 356
N WAI + I KG A+G+ + VDG D L V + A E A + P LV
Sbjct: 253 NLWAIGMSHLRATSDPEIYKKGPAFGMPGVHVDGMDVLKVREVAKEAIERARRGEGPTLV 312
Query: 357 E 357
E
Sbjct: 313 E 313
>sp|P52900|ODPA_SMIMA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
(Fragment) OS=Sminthopsis macroura GN=PDHA PE=2 SV=1
Length = 363
Score = 95.1 bits (235), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 111/234 (47%), Gaps = 5/234 (2%)
Query: 127 VSKEVAVKMYSHMVTLQVMDSVLYEAQRQGRF-SFYLTTIGEEAINIGSAAALSADDFIL 185
+++E +K Y M T++ M+ + +Q F G+EA +G A ++ D ++
Sbjct: 29 LTREEGLKYYKIMQTVRRMELKADQLYKQKIIRGFCHLYDGQEACCMGLEAGINPTDHVI 88
Query: 186 PQYREPGVLLWRGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQ 245
YR G RG +++ ++ + KG+ +H +K N+ + + Q+P
Sbjct: 89 TAYRAHGFTYTRGLPVREILAELTGRRGGCAKGKGGSMHMYAK--NFYGGNGIVGAQVPL 146
Query: 246 AVGVAYSLKMEKKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNI 305
VG+A + K +KD + GDG ++G A N AA+ + P +FIC NN + + T++
Sbjct: 147 GVGIALACKYNEKDEICLTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSV 206
Query: 306 SEQFRSDGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEVR 359
S +G I I VDG D L V A + A S K P+L+E++
Sbjct: 207 ERAAASTDYYKRGDF--IPGIMVDGMDVLCVREATKFAAAYCRSGKGPMLMELQ 258
>sp|Q6Z5N4|ODPA1_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os02g0739600 PE=2
SV=1
Length = 390
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 109/222 (49%), Gaps = 5/222 (2%)
Query: 137 SHMVTLQVMDSVLYEAQRQGRFSFYLTTIGEEAINIGSAAALSADDFILPQYREPGVLLW 196
S M +++ LY+A+ F G+EA+ +G AA++ D I+ YR+ L
Sbjct: 68 SVMRRMEIAADSLYKAKLIRGFCHLYD--GQEAVAVGMEAAITRSDSIITAYRDHCTYLA 125
Query: 197 RGYTLQQFANQVFANKADDGKGRQMPIHYGSKKLNYITISSPIATQLPQAVGVAYSLKME 256
RG L ++ +A +G+ +H+ K N+ + Q+P G+A++ K
Sbjct: 126 RGGDLVSAFAELMGRQAGCSRGKGGSMHFYKKDANFYGGHGIVGAQVPLGCGLAFAQKYR 185
Query: 257 KKDACAVAYTGDGGTSEGDFHAALNFAAVMEAPVVFICRNNGWAISTNISEQFRSDGIVV 316
K++ A GDG ++G ALN +A+ + P + +C NN + + T +S
Sbjct: 186 KEETATFALYGDGAANQGQLFEALNISALWKLPAILVCENNHYGMGTAEWRAAKSPAYYK 245
Query: 317 KGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEV 358
+G + ++VDG D LAV A + A+E AI+ P+++E+
Sbjct: 246 RGDY--VPGLKVDGMDVLAVKQACKFAKEHAIANG-PIVLEM 284
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,526,973
Number of Sequences: 539616
Number of extensions: 5498453
Number of successful extensions: 14776
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 14311
Number of HSP's gapped (non-prelim): 467
length of query: 364
length of database: 191,569,459
effective HSP length: 119
effective length of query: 245
effective length of database: 127,355,155
effective search space: 31202012975
effective search space used: 31202012975
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)