BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017891
(364 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O14308|SWC4_SCHPO SWR1-complex protein 4 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=swc4 PE=3 SV=2
Length = 437
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/157 (43%), Positives = 93/157 (59%), Gaps = 8/157 (5%)
Query: 2 NWVRVVNGVPPTGDYSFAKYNKSVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDL 61
+WV + + V Y F K+N + ++ YTDEEY+ YL D W K+ETD LF LC+ +DL
Sbjct: 87 HWV-LKSEVDSEASYKFEKFNVPLFIIDYTDEEYQNYLKDEDWNKDETDYLFRLCKDYDL 145
Query: 62 RFIVIADRFPS-----SRTVEELKDRYYGVSRAILIARAP--SPTDVSGHPLVKDPYNVS 114
RF VIADR+ + RT+E+LKDR+Y VSR IL+AR P S T L YN
Sbjct: 146 RFFVIADRYDNEKYKKHRTLEDLKDRFYSVSRKILLARNPINSMTAAQSSLLNTMEYNKE 205
Query: 115 QEVERKRALSMVLSQTKHQERKDAEVLAEAKRITDSR 151
QEV RK+ L + S+T + ++ + E KRI S+
Sbjct: 206 QEVIRKKYLIGLASRTPEEVAEEEALFIELKRIETSQ 242
>sp|Q9NPF5|DMAP1_HUMAN DNA methyltransferase 1-associated protein 1 OS=Homo sapiens
GN=DMAP1 PE=1 SV=1
Length = 467
Score = 117 bits (294), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 139/288 (48%), Gaps = 50/288 (17%)
Query: 15 DYSFAKYNKSVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRFPSS- 73
DY FA++NK+V V Y+++EY+ YL D WTK ETD LF+L RFDLRF+VI DR+
Sbjct: 123 DYPFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQ 182
Query: 74 ---RTVEELKDRYYGVSRAILIARAPSPTDVSGHPLVKDP-YNVSQEVERKRALSMVLSQ 129
R+VE+LK+RYY + + RA TD +K P ++ E RK L + ++
Sbjct: 183 FKKRSVEDLKERYYHICAKLANVRAVPGTD------LKIPVFDAGHERRRKEQLERLYNR 236
Query: 130 TKHQERKDAEVLAEAKRITDSRMASRAAEEPEMPVASHVGSESADRAVVLGDTVSPSSNI 189
T Q ++ +L E ++I ++R R S+ + + DT +
Sbjct: 237 TPEQVAEEEYLLQELRKI-EARKKEREKR-----------SQDLQKLITAADTTAEQRRT 284
Query: 190 Q-------LPSAT-----VVPSTSIIA--DSASTLASLRMLRVYLRTYALEQMVQAASSS 235
+ LP VP T+ I D S +LR R+ L SS
Sbjct: 285 ERKAPKKKLPQKKEAEKPAVPETAGIKFPDFKSAGVTLRSQRMKL------------PSS 332
Query: 236 AGLRTIKRVEQALQELGVNLKPKVPTKAVCAEHLELRKEILTLLNLQK 283
G + IK +EQ L ELGV L P PT+ + ELR +++ L L++
Sbjct: 333 VGQKKIKALEQMLLELGVELSP-TPTEELVHMFNELRSDLVLLYELKQ 379
>sp|Q9JI44|DMAP1_MOUSE DNA methyltransferase 1-associated protein 1 OS=Mus musculus
GN=Dmap1 PE=1 SV=1
Length = 468
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 139/288 (48%), Gaps = 50/288 (17%)
Query: 15 DYSFAKYNKSVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRFPSS- 73
DY FA++NK+V V Y+++EY+ YL D WTK ETD LF+L RFDLRF+VI DR+
Sbjct: 123 DYPFARFNKTVQVPVYSEQEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQ 182
Query: 74 ---RTVEELKDRYYGVSRAILIARAPSPTDVSGHPLVKDP-YNVSQEVERKRALSMVLSQ 129
R+VE+LK+RYY + + RA TD +K P ++ E RK L + ++
Sbjct: 183 FKKRSVEDLKERYYHICAKLANVRAVPGTD------LKIPVFDAGHERRRKEQLERLYNR 236
Query: 130 TKHQERKDAEVLAEAKRITDSRMASRAAEEPEMPVASHVGSESADRAVVLGDTVSPSSNI 189
T Q ++ +L E ++I ++R R S+ + + DT +
Sbjct: 237 TPEQVAEEEYLLQELRKI-EARKKEREKR-----------SQDLQKLITAADTTAEQRRT 284
Query: 190 Q-------LPSAT-----VVPSTSIIA--DSASTLASLRMLRVYLRTYALEQMVQAASSS 235
+ LP VP T+ I D S +LR R+ L SS
Sbjct: 285 ERKAPKKKLPQKKEAEKPAVPETAGIKFPDFKSAGVTLRSQRMKL------------PSS 332
Query: 236 AGLRTIKRVEQALQELGVNLKPKVPTKAVCAEHLELRKEILTLLNLQK 283
G + IK +EQ L ELGV L P PT+ + ELR +++ L L++
Sbjct: 333 VGQKKIKALEQMLLELGVELSP-TPTEELVHMFNELRSDLVLLYELKQ 379
>sp|Q4PG15|SWC4_USTMA SWR1-complex protein 4 OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=SWC4 PE=3 SV=1
Length = 615
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 85/154 (55%), Gaps = 23/154 (14%)
Query: 16 YSFAKYNKSVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRFPSS-- 73
Y +A +N + V Y+++EY ++L D WTKEETD L ELC +DLRF+VI DR+ +
Sbjct: 165 YQYAAFNTTSGVYSYSNDEYIQHLRDDDWTKEETDYLMELCTAYDLRFVVIHDRYDWAAA 224
Query: 74 ------------------RTVEELKDRYYGVSRAILIARAPSPTDVSGHPLVKDPY--NV 113
R++E+LK RYY + R ++ +R S DV ++ Y +
Sbjct: 225 QASFLAGSTSAVPQPVKERSMEDLKVRYYAICRRLIRSRI-STDDVETRQMLLSTYAFDK 283
Query: 114 SQEVERKRALSMVLSQTKHQERKDAEVLAEAKRI 147
+EVERK+A++ + ++T Q ++ + E +RI
Sbjct: 284 QREVERKKAVARLYTRTPEQLAEEEALYVEIRRI 317
>sp|P0CO96|SWC4_CRYNJ SWR1-complex protein 4 OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=SWC4 PE=3
SV=1
Length = 463
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 9/164 (5%)
Query: 2 NWVRVVNGVPPTGDYSFAKYN-KSVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFD 60
+W R+ + P F K+N V++Y+ EY+++L DP WT +ET+ LFEL + +D
Sbjct: 95 HWARITDSDPNDSVEYFGKFNLHGPSVMEYSQFEYDQHLVDPNWTLQETEYLFELLKEYD 154
Query: 61 LRFIVIADRFP--------SSRTVEELKDRYYGVSRAILIARAPSPTDVSGHPLVKDPYN 112
LRFIV ADR+ R+VE++KDRYY + R ++ R S H + ++
Sbjct: 155 LRFIVAADRYAYVSPEGEKRKRSVEDMKDRYYTICRRLIRTRTASDPVHQQHLIQAYAFD 214
Query: 113 VSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRITDSRMASRA 156
++E++RK+ S + T + ++ + E R+ + RA
Sbjct: 215 KAREIKRKQYASDLFHLTPAEIAEEEALYVEITRMQQNERRFRA 258
>sp|P0CO97|SWC4_CRYNB SWR1-complex protein 4 OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=SWC4 PE=3 SV=1
Length = 463
Score = 89.0 bits (219), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 87/164 (53%), Gaps = 9/164 (5%)
Query: 2 NWVRVVNGVPPTGDYSFAKYN-KSVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFD 60
+W R+ + P F K+N V++Y+ EY+++L DP WT +ET+ LFEL + +D
Sbjct: 95 HWARITDSDPNDSVEYFGKFNLHGPSVMEYSQFEYDQHLVDPNWTLQETEYLFELLKEYD 154
Query: 61 LRFIVIADRFP--------SSRTVEELKDRYYGVSRAILIARAPSPTDVSGHPLVKDPYN 112
LRFIV ADR+ R+VE++KDRYY + R ++ R S H + ++
Sbjct: 155 LRFIVAADRYAYVSPEGEKRKRSVEDMKDRYYTICRRLIRTRTASDPVHQQHLIQAYAFD 214
Query: 113 VSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRITDSRMASRA 156
++E++RK+ S + T + ++ + E R+ + RA
Sbjct: 215 KAREIKRKQYASDLFHLTPAEIAEEEALYVEITRMQQNERRFRA 258
>sp|Q4WNY4|SWC4_ASPFU SWR1-complex protein 4 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=swc4 PE=3
SV=1
Length = 588
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 91/163 (55%), Gaps = 29/163 (17%)
Query: 12 PTGDYSFAKYNKSVDVVK-YTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRF 70
P +Y FAKYN V + YTDEEY ++L W+++ETD L +L E +DLR++VIADR+
Sbjct: 129 PEKEYPFAKYNVKPRVPRRYTDEEYNRHLKSDDWSRQETDYLMDLVEEYDLRWVVIADRY 188
Query: 71 -----------------PSS--RTVEELKDRYYGVSRAILIARAPSPTDVS------GHP 105
P+ RT+E++K RYY ++ ++L P P+++S
Sbjct: 189 DFQPQPIDAEANATALVPAKQYRTMEQMKARYYFIAASMLALEHP-PSEMSEAEFDLHEK 247
Query: 106 LVKDPYNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRIT 148
++K ++ +E RK ++ L++T + R++ +L E KRIT
Sbjct: 248 MMK--FDPDRERARKELAALQLNRTADEVREEGILLEELKRIT 288
>sp|Q752S6|SWC4_ASHGO SWR1-complex protein 4 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=SWC4 PE=3 SV=1
Length = 488
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 94/162 (58%), Gaps = 24/162 (14%)
Query: 2 NWVR----VVNGVPPTGDYSFAKYNKSVDVVKYTDEEYEKYLTD---------PMWTKEE 48
+WV+ ++ G P SFAKY++ + + ++T+ EY++++ P W+ EE
Sbjct: 92 HWVKGSKELLEGQSPKS--SFAKYDQKLTLPEFTEGEYQEFMAQAAKGANSDAPTWSYEE 149
Query: 49 TDQLFELCERFDLRFIVIADRF--PSSRTVEELKDRYYGVSRAILIARAPSPTDVSGHPL 106
LF+LC R+DLR+ ++ DR+ SRT+E++++ +Y V + A+ P G+PL
Sbjct: 150 VQYLFDLCRRYDLRWHIVYDRYMYDESRTMEDIREMFYTVCQKYFQAKDP------GNPL 203
Query: 107 VKD-PYNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRI 147
+ Y+ QE++RK+ L+ +LS++ + ++ ++ E+++
Sbjct: 204 LPSLAYSKDQEIQRKKYLTRLLSRSAAEIAEEEALIMESRKF 245
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%)
Query: 243 RVEQALQELGVNLKPKVPTKAVCAEHLELRKEILTLLNLQKQLQYKEAE 291
+V LQELG+ ++P +P+ AV H EL + I+TLL+L++Q EAE
Sbjct: 435 KVVSVLQELGLPVRPAMPSAAVVQHHDELLRRIVTLLDLKRQQDKLEAE 483
>sp|Q870Q1|SWC4_NEUCR SWR1-complex protein 4 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=swc-4
PE=3 SV=2
Length = 733
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 82/159 (51%), Gaps = 29/159 (18%)
Query: 15 DYSFAKYNKSVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRF---- 70
D SFAK+N V V +Y++++Y L P WTKEETD L EL + FDLR+ +I DR+
Sbjct: 125 DSSFAKFNVRVSVPQYSEDQYNTNLKHPDWTKEETDYLLELAKDFDLRWPIIWDRYEYAP 184
Query: 71 --------------PSS--RTVEELKDRYYGVSRAILIARAPS------PTDVSGHPLVK 108
P+S RT+E+LK RYY V+ ++ + P+ ++ L
Sbjct: 185 QQPEGETPDGMAVVPASKPRTMEDLKARYYEVAAKMMAVQKPAQYMTRPEFELYEMMLHF 244
Query: 109 DPYNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRI 147
DP QE RKR L ++ + R++ +L E KRI
Sbjct: 245 DP---KQEQNRKRFAENTLKRSSDEAREEEALLLEIKRI 280
>sp|Q5B4T5|SWC4_EMENI SWR1-complex protein 4 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=swc4 PE=3
SV=1
Length = 586
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 89/161 (55%), Gaps = 30/161 (18%)
Query: 15 DYSFAKYNKSVDVV-KYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRF--- 70
+Y FAKYN + +YT +EY ++L W++EETD L +L E +DLR++VIADR+
Sbjct: 115 EYPFAKYNIKLKFSNRYTTDEYNRHLRSEDWSREETDYLMDLVEEYDLRWVVIADRYDFQ 174
Query: 71 ---------------PSS--RTVEELKDRYYGVSRAILIARAPSPTDVS------GHPLV 107
PS RT+E++K RYY V+ ++L P P+++S ++
Sbjct: 175 PQRVDNTEETSSALVPSKQFRTMEQMKARYYFVAASMLALEHP-PSEMSEAEFDLHERMM 233
Query: 108 KDPYNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRIT 148
K ++ +E RK ++ L++T + R++ +L E KRIT
Sbjct: 234 K--FDPERERHRKELAALQLNRTADEVREETVLLEELKRIT 272
>sp|P53201|SWC4_YEAST SWR1-complex protein 4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SWC4 PE=1 SV=1
Length = 476
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 90/180 (50%), Gaps = 42/180 (23%)
Query: 2 NWVR----VVNGVPPTGDYSFAKYNKSVDVVKYTDEEYEKYLTD---------------- 41
+WV+ ++ P YS K+N+ + + +T EEYE ++ +
Sbjct: 93 HWVKGSKELIGDTPKESPYS--KFNQHLSIPSFTKEEYEAFMNENEGTQKSVESEKNHNE 150
Query: 42 -----------PMWTKEETDQLFELCERFDLRFIVIADRFP--SSRTVEELKDRYYGVSR 88
W+ EE + LF LC+++DLR+ +I DR+ +SRT+E+LK+++Y R
Sbjct: 151 NFTNEKKDESKNSWSFEEIEYLFNLCKKYDLRWFLIFDRYSYNNSRTLEDLKEKFYYTCR 210
Query: 89 AILIARAPSPTDVSGHPLVKD-PYNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRI 147
A PS +PL+ ++ +E+ERK+ L +LS++ + ++ ++ E+K+
Sbjct: 211 NYFKASDPS------NPLLSSLNFSAEKEIERKKYLQRLLSRSAAEIAEEEALVVESKKF 264
>sp|Q4HY90|SWC4_GIBZE SWR1-complex protein 4 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=SWC4 PE=3 SV=2
Length = 624
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 71/134 (52%), Gaps = 29/134 (21%)
Query: 15 DYSFAKYNKSVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRF---- 70
D +FAKYN V V +Y++ +Y++ L WTKEETD L EL + FDLR+ +I DR+
Sbjct: 125 DSAFAKYNVQVSVPQYSEGQYQQSLQHVDWTKEETDYLLELAQDFDLRWPLIWDRYEWNP 184
Query: 71 PS--------------------SRTVEELKDRYYGVSRAILIARAP----SPTDVSGHPL 106
P+ SRT+E+LK RYY V+ ++ A+ P + + S H L
Sbjct: 185 PATNGEADDDGDESKAIVPATRSRTLEDLKARYYEVASKMMAAQKPVQYMTQPEFSLHEL 244
Query: 107 VKDPYNVSQEVERK 120
+ +N QE RK
Sbjct: 245 MAH-FNPQQEKLRK 257
>sp|Q6CSS3|SWC4_KLULA SWR1-complex protein 4 OS=Kluyveromyces lactis (strain ATCC 8585 /
CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=SWC4 PE=3 SV=1
Length = 497
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 68/119 (57%), Gaps = 10/119 (8%)
Query: 17 SFAKYNKSVDVVKYTDEEYEKYLT--DPMWTKEETDQLFELCERFDLRFIVIADRFP--- 71
SFAK+N+ + + + ++E+++++ + W E LF+LC +D+++ VIADRF
Sbjct: 111 SFAKFNQHLTIPSFDEQEFQQFMNGNNSEWKYGEVQYLFDLCRNYDMKWFVIADRFNYNG 170
Query: 72 SSRTVEELKDRYYGVSRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQT 130
+ R +++LK+ +Y V + + + P +S K+ +E+ERK+ L +L +T
Sbjct: 171 TERKLDDLKEMFYTVCQWYFLYKDPDNPLISQLNFPKE-----KELERKKYLERLLKRT 224
Score = 39.7 bits (91), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 243 RVEQALQELGVNLKPKVPTKAVCAEHLELRKEILTLLNLQKQLQYKEAE 291
++ LQELG+ ++P +P+ V EH +L K+I TLL L+KQ+ AE
Sbjct: 444 KIVATLQELGLPVRPAMPSLEVVQEHEKLLKKIATLLELKKQVDKLTAE 492
>sp|Q5AAJ7|SWC4_CANAL SWR1-complex protein 4 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=SWC4 PE=3 SV=1
Length = 635
Score = 62.4 bits (150), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 8/111 (7%)
Query: 40 TDPMWTKEETDQLFELCERFDLRFIVIADRFPS-SRTVEELKDRYYGVSRAILIARAPSP 98
T+ WT +ET LFELC+ F+L++ +I DRFP+ +RT E+LK+++Y + IL +
Sbjct: 303 TESEWTYKETKHLFELCQAFELKWPIIHDRFPNPNRTAEDLKEQFYRICIKILENQK--- 359
Query: 99 TDVSGHPLVKD--PYNVSQEVERKRALSMVLSQTKHQERKDAEVLAEAKRI 147
L+ Y +E+ERK+ L +L +T + ++ ++ EA+R
Sbjct: 360 --NKNQALIDSLKAYCKPRELERKQYLENLLKRTPAEIAEEESLVIEARRF 408
>sp|Q6FTV1|SWC4_CANGA SWR1-complex protein 4 OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SWC4 PE=3
SV=1
Length = 532
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 10/91 (10%)
Query: 44 WTKEETDQLFELCERFDLRFIVIADRFP---SSRTVEELKDRYYGVSRAILIARAPSPTD 100
W E LF+LC+++DLR+ VI DR+ S+RT+E+LK ++Y VS+ A+ P
Sbjct: 189 WEYNEVKYLFDLCKKYDLRWFVIQDRYDYENSNRTLEDLKSKFYEVSKCYFKAKKPD--- 245
Query: 101 VSGHPLVKD-PYNVSQEVERKRALSMVLSQT 130
P+++ Y+ +E +RK+ L +L+++
Sbjct: 246 ---DPMLQSLNYSKDKETQRKKYLERLLARS 273
Score = 36.6 bits (83), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 235 SAGLRTIK-----RVEQALQELGVNLKPKVPTKAVCAEHLELRKEILTLLNLQKQLQYKE 289
SA + T K ++ QELG+ +P +PT V E+ L K+I TLL+++KQ+ E
Sbjct: 466 SAKITTFKPAIQNKIISTAQELGIPARPVMPTFEVVTEYEALLKKIATLLDIKKQIDKIE 525
Query: 290 A 290
A
Sbjct: 526 A 526
>sp|Q6C9M6|SWC4_YARLI SWR1-complex protein 4 OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=SWC4 PE=3 SV=1
Length = 504
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 2 NWVRVVNGVPPTGD-YSFAKYNKSVDVVKYTDEEYEKY-LTDPMWTKEETDQLFELCERF 59
+WVR G GD Y FA N + + T E+Y+ L P WT EET L LC F
Sbjct: 100 HWVR--GGELTQGDQYPFAALNTQISFPELTQEDYDGLKLATPGWTLEETRYLMHLCSEF 157
Query: 60 DLRFIVIADRF 70
DLR+ VI DR+
Sbjct: 158 DLRWPVIHDRW 168
>sp|Q5NZG9|DXR_AROAE 1-deoxy-D-xylulose 5-phosphate reductoisomerase OS=Aromatoleum
aromaticum (strain EbN1) GN=dxr PE=3 SV=1
Length = 403
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 24 SVDVVKYTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEELKDRY 83
++DV+ + +E + + + + ++LFELC RF RF V+ D S +L+ R
Sbjct: 25 TLDVLARHPDRFEAF---ALTAQIQVERLFELCLRFSPRFAVLVD----SAAASDLRQRL 77
Query: 84 YGVSRAILIARAPSP-TDVSGHP 105
A + P DV+ HP
Sbjct: 78 KAAGSATEVLAGPGALVDVAAHP 100
>sp|Q14527|HLTF_HUMAN Helicase-like transcription factor OS=Homo sapiens GN=HLTF PE=1
SV=2
Length = 1009
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 38 YLTDPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEE 78
+L DP W DQ F+ C R + VI +F +VEE
Sbjct: 928 FLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEE 968
>sp|Q6CNI5|SHE1_KLULA Mitotic spindle-associated protein SHE1 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=SHE1 PE=3 SV=1
Length = 331
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 244 VEQALQELGVNLKPKVPTKAVCAEHLELRKEILTLLNL------QKQLQYKEAEGSSYRD 297
V Q L++ NL P V + HL E+ +++ +K+ Q ++ + Y
Sbjct: 29 VLQELEQRASNLLPNVSPEKTRLMHLGHDSEMKNSISMKFQDKHEKRFQVMDSIDTHYSL 88
Query: 298 GSYIDMPGTPKRSQRAGDQDRTFVPESINFGGERVGKRDQKRKG 341
Y MP TP + + D D T V ++N G K+ QK G
Sbjct: 89 AKYSGMPQTPGKRKNGSDADETSV--AVNLGSPGSVKKKQKSVG 130
>sp|Q6PCN7|HLTF_MOUSE Helicase-like transcription factor OS=Mus musculus GN=Hltf PE=1
SV=1
Length = 1003
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 38 YLTDPMWTKEETDQLFELCERFDLRFIVIADRFPSSRTVEE 78
+L DP W DQ F+ C R + VI +F +VEE
Sbjct: 922 FLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEE 962
>sp|O14299|WIS4_SCHPO MAP kinase kinase kinase wis4 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=wis4 PE=3 SV=1
Length = 1401
Score = 32.7 bits (73), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 21/117 (17%)
Query: 88 RAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKHQERKDAEVLA----E 143
RA+ + P TD ++ P + +K +LS ++ E K A++LA +
Sbjct: 1296 RAVDLLTHPWITDFRKKTIITMP---PATITKKTSLSHTIT-----EEKTAQLLAGRHDD 1347
Query: 144 AKRITDSRMASRAAEEPEMPVASHVGSESADRAVVLGDTVSPSSNIQLPSATVVPST 200
+K TDS +A+ EE +PVAS+VG + + +I LP A V P T
Sbjct: 1348 SKAETDS-LAASYKEESALPVASNVGLRQPNELRI--------DSINLPPAIVTPDT 1395
>sp|O51581|G6PD_BORBU Glucose-6-phosphate 1-dehydrogenase OS=Borrelia burgdorferi (strain
ATCC 35210 / B31 / CIP 102532 / DSM 4680) GN=zwf PE=3
SV=1
Length = 478
Score = 32.3 bits (72), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 23/164 (14%)
Query: 30 YTDEEYEKYLTDPMWTKEETDQLFELCERFDLRFIVIADRF---PSSRTVEELKDRYYGV 86
+TD+E+ Y+ D +W +EETD L E+ F F+ + F S + + + DR
Sbjct: 51 FTDKEFRLYIKDSLW-QEETDSLIEIFLNF---FVYVFGDFNEKESYKNLFKFLDR---- 102
Query: 87 SRAILIARAPSPTDVSGHPLVKDPYNVSQEVERKRALSMVLSQTKH-QERKDAEVLAEAK 145
SR + + SP P++ +K LS L+ +K E+ L AK
Sbjct: 103 SRETIYYLSTSPAFYG--PIINHL--------KKYFLSEKLTLSKIVLEKPFGSSLETAK 152
Query: 146 RITDSRMASRAAEEPEMPVASHVGSESADRAVVLGDTVSPSSNI 189
++ +S + S E+ + ++G E+ S NI
Sbjct: 153 KL-NSLLYSAFKEDQIYRIDHYLGKETVQNIFTFRFGNSIFENI 195
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.129 0.356
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,492,693
Number of Sequences: 539616
Number of extensions: 5403492
Number of successful extensions: 14323
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 14246
Number of HSP's gapped (non-prelim): 89
length of query: 364
length of database: 191,569,459
effective HSP length: 119
effective length of query: 245
effective length of database: 127,355,155
effective search space: 31202012975
effective search space used: 31202012975
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)