Query 017892
Match_columns 364
No_of_seqs 230 out of 1195
Neff 6.2
Searched_HMMs 29240
Date Mon Mar 25 06:36:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017892.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017892hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j0a_A Beta-1,3-N-acetylglucos 99.9 1.5E-24 5.1E-29 207.7 16.1 196 111-333 10-217 (280)
2 2d7i_A Polypeptide N-acetylgal 93.1 3 0.0001 42.6 17.0 164 154-325 146-332 (570)
3 1xhb_A Polypeptide N-acetylgal 92.9 2.1 7.1E-05 42.2 15.0 165 154-326 63-253 (472)
4 4fix_A UDP-galactofuranosyl tr 90.0 6 0.0002 41.4 15.4 126 201-328 257-414 (657)
5 2ffu_A Ppgalnact-2, polypeptid 89.5 7.5 0.00026 38.6 15.1 124 202-325 136-284 (501)
6 1qg8_A Protein (spore coat pol 89.3 11 0.00036 33.1 15.2 120 201-327 77-210 (255)
7 3bcv_A Putative glycosyltransf 88.5 11 0.00039 32.4 14.1 165 152-326 34-220 (240)
8 2z86_A Chondroitin synthase; G 86.6 23 0.00078 35.9 16.9 123 203-325 165-324 (625)
9 4hg6_A Cellulose synthase subu 76.6 37 0.0013 36.1 14.5 132 197-332 224-369 (802)
10 2z86_A Chondroitin synthase; G 73.8 31 0.0011 34.9 12.5 159 152-326 404-567 (625)
11 2bo4_A Mannosylglycerate synth 46.7 27 0.00093 34.2 6.0 167 153-324 29-210 (397)
12 2c0n_A A197; thermophil protei 32.6 1.9E+02 0.0064 25.8 8.5 117 208-332 49-182 (203)
13 1fo8_A Alpha-1,3-mannosyl-glyc 31.3 70 0.0024 30.6 6.0 87 201-296 88-179 (343)
14 3ckj_A Putative uncharacterize 22.1 4.5E+02 0.015 23.9 10.5 91 204-294 123-228 (329)
15 2lnd_A De novo designed protei 22.1 38 0.0013 26.1 1.7 71 120-209 31-104 (112)
16 3f1y_A Mannosyl-3-phosphoglyce 21.1 44 0.0015 32.4 2.4 109 203-315 170-290 (387)
No 1
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=99.92 E-value=1.5e-24 Score=207.67 Aligned_cols=196 Identities=17% Similarity=0.156 Sum_probs=133.4
Q ss_pred CCCceEEEEEeCCCCC-HHHHHHHHHHHhcCcchhhccccCCCeEEEEEeecCCCCCCcchhhhHHhhhhCCCeeeeCCC
Q 017892 111 KKRPLVVIGILTRFGR-KNNRDAIRKAWMGTGAALKKRENEKGIITRFVIGRSANRGDSLDQDIDSENKQTNDFFILDHH 189 (364)
Q Consensus 111 ~~~~~llI~V~S~~~~-~~rR~aIR~TW~~~~~~lk~Le~~~~i~v~FvvG~s~~~~~~~~~~I~~E~~~~~Dil~l~d~ 189 (364)
...-.|+|+|+|++++ .+||.+||+||++.... . .||.+..+ +..+... ..++++. .++
T Consensus 10 ~~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~---------~--~fifsd~~------d~~l~~~--~~~~~~~-~~~ 69 (280)
T 2j0a_A 10 LQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQ---------Q--TFIFTDSP------DERLQER--LGPHLVV-TQC 69 (280)
T ss_dssp CCGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGG---------G--EEEEESSC------CHHHHHH--HGGGEEE-CCC
T ss_pred CCcccEEEEEECcHHHHHHHHHHHHHHHhccCCC---------c--eEEEcCCC------ccccccc--cccccee-ccc
Confidence 3456899999999984 56889999999987632 1 24333322 2334332 2345554 455
Q ss_pred C--CCCCCchHHHHHHHHHHHhCCCccEEEEEcCeeeecHHHHHHHHhhcCCCCceEEEEeecCcccccCCCccccCCcc
Q 017892 190 V--EAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGCMKSGDVFSEPGHKWYEPDWW 267 (364)
Q Consensus 190 ~--Dsy~nLt~Kt~~~~~wa~~~~~a~f~lKvDDDvfVnl~~L~~~L~~~~~~~~lyiG~~~~~~v~r~~~~Kwy~p~~w 267 (364)
. +++.+++.|+...+++... .+++|++|+|||+|||+++|+.+|..+++..++|+|....+.|++. +++.|.+
T Consensus 70 ~~~~~~~~l~~K~~~~~~~~l~-~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~~---~~~~~~~- 144 (280)
T 2j0a_A 70 SAEHSHPALSCKMAAEFDAFLV-SGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIHA---SELQSKQ- 144 (280)
T ss_dssp -------CCCHHHHHHHHHHHH-HTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-----------------
T ss_pred cccccccchHHHHHHHHHHHhC-CCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCccccc---cccCccc-
Confidence 3 4678899999999997653 5899999999999999999999999999999999999765555542 3455432
Q ss_pred ccCCCCCcCcCc-cCCeEeeCHHHHHHHHHhcccC-------CCCCcchHHHHHHHh-cCCCeEecCCCcccCCC
Q 017892 268 KFGDKKLYFRHA-SGEMYVISRALAKFISINRSIL-------RTYAHDDVSAGSWFL-GLDVKYLNEGKFCCSSW 333 (364)
Q Consensus 268 ~~y~~~~Yp~y~-~G~gYvlS~dla~~I~~~~~~l-------~~~~~EDV~vG~~l~-~l~V~~i~~~~f~~~~~ 333 (364)
.++...| +|| +|+||+||++++++|+...... .....||+++|.|+. .+||.+.+.++|+.+.+
T Consensus 145 -~~~~~~~-~y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~~ 217 (280)
T 2j0a_A 145 -RTKLVRF-WFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLE 217 (280)
T ss_dssp -------C-CEECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSSS
T ss_pred -ccccccc-CcccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCCc
Confidence 1222245 466 5689999999999999743222 223469999999998 99999999999998776
No 2
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=93.14 E-value=3 Score=42.59 Aligned_cols=164 Identities=10% Similarity=0.038 Sum_probs=83.9
Q ss_pred EEEEEeecCCCCCCcchhhhHHhhhhCCCeeeeCCCCCCCCCchHHHHHHHHHHHhCCCccEEEEEcCeeeecHHHHHHH
Q 017892 154 ITRFVIGRSANRGDSLDQDIDSENKQTNDFFILDHHVEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGAT 233 (364)
Q Consensus 154 ~v~FvvG~s~~~~~~~~~~I~~E~~~~~Dil~l~d~~Dsy~nLt~Kt~~~~~wa~~~~~a~f~lKvDDDvfVnl~~L~~~ 233 (364)
.++.|-..|.+ +.+.+.+++-.+++..|-++. ..+ -..+.. +...+.+....+|++..|+|+.+.++-|..+
T Consensus 146 EIIVVDDgS~D--~tl~~~l~~~~~~~~~v~vi~-~~~-n~G~~~----A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~l 217 (570)
T 2d7i_A 146 EIVLVDDFSDR--EHLKKPLEDYMALFPSVRILR-TKK-REGLIR----TRMLGASVATGDVITFLDSHCEANVNWLPPL 217 (570)
T ss_dssp EEEEEECSCCC--GGGTHHHHHHHTTSTTEEEEE-CSS-CCCHHH----HHHHHHHHCCSSEEEECCSSEEECTTCSHHH
T ss_pred EEEEEECCCCc--HHHHHHHHHHHHhCCeEEEEE-CCC-CCCHHH----HHHHHHHhcCCCEEEEEcCCccccccHHHHH
Confidence 45555544432 232445555555665565542 222 123332 3334444346799999999999998877777
Q ss_pred HhhcCCCCceEEEE-ee--cCcc--cccC-CC------ccc-----cCC----ccccCCCCCcCcCccCCeEeeCHHHHH
Q 017892 234 LATHLDKPRVYIGC-MK--SGDV--FSEP-GH------KWY-----EPD----WWKFGDKKLYFRHASGEMYVISRALAK 292 (364)
Q Consensus 234 L~~~~~~~~lyiG~-~~--~~~v--~r~~-~~------Kwy-----~p~----~w~~y~~~~Yp~y~~G~gYvlS~dla~ 292 (364)
+......+.+.+|. +. .+.. .+.. .. .|. .+. .+..+......+++.|+++++++++..
T Consensus 218 l~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~ 297 (570)
T 2d7i_A 218 LDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFW 297 (570)
T ss_dssp HHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSSTTSCEECSSCCSSSEEEEHHHHH
T ss_pred HHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccccchhhhccCCCcceecccccceEEEEEHHHHH
Confidence 76654333444443 21 1110 0000 00 010 000 000000112234678999999999999
Q ss_pred HHHHhcccCCCCCcchHHHHHHH--hcCCCeEecC
Q 017892 293 FISINRSILRTYAHDDVSAGSWF--LGLDVKYLNE 325 (364)
Q Consensus 293 ~I~~~~~~l~~~~~EDV~vG~~l--~~l~V~~i~~ 325 (364)
.+---...+..+..||+-+..-+ .|..+..+..
T Consensus 298 ~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~ 332 (570)
T 2d7i_A 298 ELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPC 332 (570)
T ss_dssp HTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEE
T ss_pred hcCCCCCcccccCcchHHHHHHHHhCCCeEEEccC
Confidence 88543344445557999877544 4444444433
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=92.91 E-value=2.1 Score=42.18 Aligned_cols=165 Identities=13% Similarity=0.108 Sum_probs=85.1
Q ss_pred EEEEEeecCCCCCCcchhhhHHhhhhCC-CeeeeCCCCCCCCCchHHHHHHHHHHHhCCCccEEEEEcCeeeecHHHHHH
Q 017892 154 ITRFVIGRSANRGDSLDQDIDSENKQTN-DFFILDHHVEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGA 232 (364)
Q Consensus 154 ~v~FvvG~s~~~~~~~~~~I~~E~~~~~-Dil~l~d~~Dsy~nLt~Kt~~~~~wa~~~~~a~f~lKvDDDvfVnl~~L~~ 232 (364)
.++.|-..|.+ +...+.+++-.+++. .+.++. ..++ ..+ -.+...+.+.-..+|++..|+|..+.++.|..
T Consensus 63 EIIvVDd~S~d--~~t~~~l~~~~~~~~~~v~vi~-~~~n-~G~----~~a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ 134 (472)
T 1xhb_A 63 EIVLVDDASER--DFLKRPLESYVKKLKVPVHVIR-MEQR-SGL----IRARLKGAAVSRGQVITFLDAHCECTAGWLEP 134 (472)
T ss_dssp EEEEEECSCCC--GGGTHHHHHHHHSSSSCEEEEE-CSSC-CCH----HHHHHHHHHHCCSSEEEEEESSEEECTTCHHH
T ss_pred EEEEEECCCCc--HHHHHHHHHHHHHCCCcEEEEE-CCCC-CCh----HHHHHHHHHhccCCeEEEECCCeEeCccHHHH
Confidence 45555544432 123344554445565 454442 2222 122 23444445545689999999999999988888
Q ss_pred HHhhcCCCCc-eEEEEee--cCcccc-cCCC-------ccccCCccccC------------CCCCcCcCccCCeEeeCHH
Q 017892 233 TLATHLDKPR-VYIGCMK--SGDVFS-EPGH-------KWYEPDWWKFG------------DKKLYFRHASGEMYVISRA 289 (364)
Q Consensus 233 ~L~~~~~~~~-lyiG~~~--~~~v~r-~~~~-------Kwy~p~~w~~y------------~~~~Yp~y~~G~gYvlS~d 289 (364)
+++.....+. +..|.+. ....+. .... .|.....|... .....-+++.|+.++++++
T Consensus 135 ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~ 214 (472)
T 1xhb_A 135 LLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRD 214 (472)
T ss_dssp HHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHH
T ss_pred HHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCCHHHHhcccCCCCCcccCccccceeEEEEHH
Confidence 7776543333 3333321 111000 0000 01100000000 0122345788999999999
Q ss_pred HHHHHHHhcccCCCCCcchHHHHHHH--hcCCCeEecCC
Q 017892 290 LAKFISINRSILRTYAHDDVSAGSWF--LGLDVKYLNEG 326 (364)
Q Consensus 290 la~~I~~~~~~l~~~~~EDV~vG~~l--~~l~V~~i~~~ 326 (364)
+...+---...+..+..||+-++.-+ .|..+..+...
T Consensus 215 ~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~ 253 (472)
T 1xhb_A 215 YFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCS 253 (472)
T ss_dssp HHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCc
Confidence 99987543344455567998777444 45555554443
No 4
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=90.00 E-value=6 Score=41.45 Aligned_cols=126 Identities=17% Similarity=0.112 Sum_probs=69.8
Q ss_pred HHHHHHHHhCCCccEEEEEcCeeeecHHHHHHHHhhcC--CCCceEEEEeec--CcccccCCCccccCCc--c-------
Q 017892 201 KLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHL--DKPRVYIGCMKS--GDVFSEPGHKWYEPDW--W------- 267 (364)
Q Consensus 201 ~~~~~wa~~~~~a~f~lKvDDDvfVnl~~L~~~L~~~~--~~~~lyiG~~~~--~~v~r~~~~Kwy~p~~--w------- 267 (364)
-..++.|....+++|++..|||+.+.++.|..++.... +...+..|.+.. .+-.-...+.|..+.. |
T Consensus 257 N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 336 (657)
T 4fix_A 257 SRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAE 336 (657)
T ss_dssp HHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCC
T ss_pred HHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEecccccccccccccc
Confidence 34566666544789999999999999988888776543 233333334431 1100000111111000 0
Q ss_pred ---cc--------------CCCCCcCcCccCCeEeeCHHHHHHHHHhcccCCCCCcchHHHHHHHhcCC--CeEecCCCc
Q 017892 268 ---KF--------------GDKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLD--VKYLNEGKF 328 (364)
Q Consensus 268 ---~~--------------y~~~~Yp~y~~G~gYvlS~dla~~I~~~~~~l~~~~~EDV~vG~~l~~l~--V~~i~~~~f 328 (364)
.| +.......|++|.+.++.+++...+---.. -.+..||+-++.=+...| +..+.+...
T Consensus 337 ~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~--~F~~~ED~Dl~lR~~~~G~ki~~~p~a~V 414 (657)
T 4fix_A 337 YDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLP--LFIKWDDADYGLRAAEHGYPTVTLPGAAI 414 (657)
T ss_dssp SCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCS--CSSSSHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred ccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChh--HhccCcHHHHHHHHHHcCCeEEEECCEEE
Confidence 00 011123458899999999999998743221 223469999987665444 444444333
No 5
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=89.47 E-value=7.5 Score=38.59 Aligned_cols=124 Identities=10% Similarity=0.124 Sum_probs=68.1
Q ss_pred HHHHHHHhCCCccEEEEEcCeeeecHHHHHHHHhhcCCCCceEEEE-ee--cCcccc--c--C----CCccccCCccc--
Q 017892 202 LFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKPRVYIGC-MK--SGDVFS--E--P----GHKWYEPDWWK-- 268 (364)
Q Consensus 202 ~~~~wa~~~~~a~f~lKvDDDvfVnl~~L~~~L~~~~~~~~lyiG~-~~--~~~v~r--~--~----~~Kwy~p~~w~-- 268 (364)
.+...+.+.-..+|++.+|+|..+.++.|..++......+...++. +. ....+. . . .-.|.....|.
T Consensus 136 ~A~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (501)
T 2ffu_A 136 RSRVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYM 215 (501)
T ss_dssp HHHHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccC
Confidence 3445555545789999999999999888888777654333323332 21 100000 0 0 00010000000
Q ss_pred --------c-CC-CCCcCcCccCCeEeeCHHHHHHHHHhcccCCCCCcchHHHHHHH--hcCCCeEecC
Q 017892 269 --------F-GD-KKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWF--LGLDVKYLNE 325 (364)
Q Consensus 269 --------~-y~-~~~Yp~y~~G~gYvlS~dla~~I~~~~~~l~~~~~EDV~vG~~l--~~l~V~~i~~ 325 (364)
. -+ .....+++.|++.++++++...+---...+..+..||+-+..-+ .|..+..+..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~ 284 (501)
T 2ffu_A 216 TPEQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPC 284 (501)
T ss_dssp CHHHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEE
T ss_pred CHHHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccC
Confidence 0 00 11234567899999999999988643334445558999886544 4554554443
No 6
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=89.29 E-value=11 Score=33.06 Aligned_cols=120 Identities=13% Similarity=-0.022 Sum_probs=69.9
Q ss_pred HHHHHHHHhCCCccEEEEEcCeeeecHHHHHHHHhhcC--CCCceEEEEee----c--CcccccCCCccccCCccccCCC
Q 017892 201 KLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHL--DKPRVYIGCMK----S--GDVFSEPGHKWYEPDWWKFGDK 272 (364)
Q Consensus 201 ~~~~~wa~~~~~a~f~lKvDDDvfVnl~~L~~~L~~~~--~~~~lyiG~~~----~--~~v~r~~~~Kwy~p~~w~~y~~ 272 (364)
-..+..+.+..+.+|++..|||.++.++.|..++.... +...+..|.+. . +.++ ..+..|.. .+ .
T Consensus 77 ~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----~~~~~~~~-~~--~ 149 (255)
T 1qg8_A 77 AALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIV----KETVRPAA-QV--T 149 (255)
T ss_dssp HHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEE----EEEEECCC-SC--B
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcch----hhccCchH-HH--H
Confidence 34556666656889999999999999888887776653 34445545432 1 1111 11112211 11 1
Q ss_pred CCcCcCccCCeEeeCHHHHHHHHHhc-----ccCCCCCcchHHHHHHHhcC-CCeEecCCC
Q 017892 273 KLYFRHASGEMYVISRALAKFISINR-----SILRTYAHDDVSAGSWFLGL-DVKYLNEGK 327 (364)
Q Consensus 273 ~~Yp~y~~G~gYvlS~dla~~I~~~~-----~~l~~~~~EDV~vG~~l~~l-~V~~i~~~~ 327 (364)
.....+..|++.++.++++..+-... ........||.-+..-+... .+.++++..
T Consensus 150 ~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g~~~~~~~~~ 210 (255)
T 1qg8_A 150 WNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFYPFYPLDEEL 210 (255)
T ss_dssp SCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTCCBEEEEEEE
T ss_pred HhhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhCCEEEecCcE
Confidence 12344568899999999999876211 01122457999887666433 355555443
No 7
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=88.55 E-value=11 Score=32.45 Aligned_cols=165 Identities=13% Similarity=0.039 Sum_probs=79.8
Q ss_pred CeEEEEEeecCCCCCCcchhhhHHhhhhCCCeeeeCCCCCCCCCchHHHHHHHHHHHhCCCccEEEEEcCeeeecHHHHH
Q 017892 152 GIITRFVIGRSANRGDSLDQDIDSENKQTNDFFILDHHVEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLG 231 (364)
Q Consensus 152 ~i~v~FvvG~s~~~~~~~~~~I~~E~~~~~Dil~l~d~~Dsy~nLt~Kt~~~~~wa~~~~~a~f~lKvDDDvfVnl~~L~ 231 (364)
.+.++.|-..|.+ ...+.+++-.+++..+.++. .+ |.. .-.....+.+....+|++.+|||.++.++.|.
T Consensus 34 ~~eiIvvDd~S~d---~t~~~~~~~~~~~~~i~~i~--~~---n~G--~~~a~N~g~~~a~g~~i~~lD~Dd~~~~~~l~ 103 (240)
T 3bcv_A 34 DIEIILIDDESPD---NCPKICDDYAAQYPNIKVIH--KK---NAG--LGMACNSGLDVATGEYVAFCDSDDYVDSDMYM 103 (240)
T ss_dssp SEEEEEEECCCSS---SHHHHHHHHHHHCSSEEEEE--CC---CCC--HHHHHHHHHHHCCSSEEEECCTTCCCCTTHHH
T ss_pred CeEEEEEECCCCc---CHHHHHHHHHhhCCCEEEEE--CC---CCC--hHHHHHHHHHHcCCCEEEEECCCCcCCHHHHH
Confidence 4566666544432 23334444444566665542 22 221 22344555555578999999999999988888
Q ss_pred HHHhhcCC-CCceEEEEee----cCcc---ccc-C-CCccccCCcc-----ccCC-CCCc---C-cCccCCeEeeCHHHH
Q 017892 232 ATLATHLD-KPRVYIGCMK----SGDV---FSE-P-GHKWYEPDWW-----KFGD-KKLY---F-RHASGEMYVISRALA 291 (364)
Q Consensus 232 ~~L~~~~~-~~~lyiG~~~----~~~v---~r~-~-~~Kwy~p~~w-----~~y~-~~~Y---p-~y~~G~gYvlS~dla 291 (364)
.++..... ...+.+|... .+.+ +.. + ...++....+ .+.. ...+ + ...+|++.++.++++
T Consensus 104 ~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~ 183 (240)
T 3bcv_A 104 TMYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDLIASDPYAREERAIQVSAKVVLYRRNLI 183 (240)
T ss_dssp HHHHHHHHHTCSEEEC--------------------CEEECSHHHHHHHHGGGTSSCHHHHHHHHHHHTCSCEEEEHHHH
T ss_pred HHHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHHhhcchhhccccccccchhheeeeHHHH
Confidence 77766532 3444444321 1110 000 0 0001110000 0000 0000 0 013578899999999
Q ss_pred HHHHHhcccCCCCCcchHHHHHHHh--cCCCeEecCC
Q 017892 292 KFISINRSILRTYAHDDVSAGSWFL--GLDVKYLNEG 326 (364)
Q Consensus 292 ~~I~~~~~~l~~~~~EDV~vG~~l~--~l~V~~i~~~ 326 (364)
..+-.....-..+..||.-+..-+. +..+..+++.
T Consensus 184 ~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~ 220 (240)
T 3bcv_A 184 EKKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQT 220 (240)
T ss_dssp HHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC--
T ss_pred HHcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCC
Confidence 8853211111123469998886554 4456666665
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=86.61 E-value=23 Score=35.90 Aligned_cols=123 Identities=12% Similarity=0.070 Sum_probs=66.4
Q ss_pred HHHHHHhCCCccEEEEEcCeeeecHHHHHHHHhhcCCCC-ceEEEEee---cCc-cc----ccC----------------
Q 017892 203 FFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHLDKP-RVYIGCMK---SGD-VF----SEP---------------- 257 (364)
Q Consensus 203 ~~~wa~~~~~a~f~lKvDDDvfVnl~~L~~~L~~~~~~~-~lyiG~~~---~~~-v~----r~~---------------- 257 (364)
....+.+....+|++..|+|..+.++.|..++......+ ...+|... .+. .. ...
T Consensus 165 a~N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (625)
T 2z86_A 165 VRNLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVA 244 (625)
T ss_dssp HHHHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC--------
T ss_pred HHHHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchh
Confidence 344555545789999999999999888888777654222 23334321 110 00 000
Q ss_pred -------CCccccCCcc---ccCCCCCcCcCccCCeEeeCHHHHHHHHHhcccCCCCCcchHHHHHHHhcCC--CeEecC
Q 017892 258 -------GHKWYEPDWW---KFGDKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLD--VKYLNE 325 (364)
Q Consensus 258 -------~~Kwy~p~~w---~~y~~~~Yp~y~~G~gYvlS~dla~~I~~~~~~l~~~~~EDV~vG~~l~~l~--V~~i~~ 325 (364)
...|....+. .+........++.|++.++++++...+---...+..+..||.-++.=+...| +.++.+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~ 324 (625)
T 2z86_A 245 GKVEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEG 324 (625)
T ss_dssp -------CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECGG
T ss_pred hhhccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEccc
Confidence 0001000000 0000111223578999999999999885322334444579999886665444 444443
No 9
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=76.56 E-value=37 Score=36.11 Aligned_cols=132 Identities=12% Similarity=-0.026 Sum_probs=72.0
Q ss_pred hHHHHHHHHHHHhCCCccEEEEEcCeeeecHHHHHHHHhhcC--CCCceEEEEee--cCcccccCCCccc-cC-CccccC
Q 017892 197 PNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLGATLATHL--DKPRVYIGCMK--SGDVFSEPGHKWY-EP-DWWKFG 270 (364)
Q Consensus 197 t~Kt~~~~~wa~~~~~a~f~lKvDDDvfVnl~~L~~~L~~~~--~~~~lyiG~~~--~~~v~r~~~~Kwy-~p-~~w~~y 270 (364)
..|.- .++.+.+..+.+|++.+|+|+.+.++.|...+.... ++-.+..|... +..+.......+. .+ +...++
T Consensus 224 ~GKa~-alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (802)
T 4hg6_A 224 HAKAG-NMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFY 302 (802)
T ss_dssp SHHHH-HHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHH
T ss_pred CcchH-HHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHH
Confidence 34443 456666656889999999999999998888877652 33333333221 1111100000000 00 000000
Q ss_pred C------CCCcCcCccCCeEeeCHHHHHHHHHhcccCCCCCcchHHHHHHHhcCC--CeEecCCCcccCC
Q 017892 271 D------KKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWFLGLD--VKYLNEGKFCCSS 332 (364)
Q Consensus 271 ~------~~~Yp~y~~G~gYvlS~dla~~I~~~~~~l~~~~~EDV~vG~~l~~l~--V~~i~~~~f~~~~ 332 (364)
. ...-.+++.|++.++.+++.+.+---. .....||..++.-+...| +..+++.......
T Consensus 303 ~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vGgf~---~~~~~ED~~l~~rl~~~G~ri~~~~~~~~~~~~ 369 (802)
T 4hg6_A 303 GKIHRGLDRWGGAFFCGSAAVLRRRALDEAGGFA---GETITEDAETALEIHSRGWKSLYIDRAMIAGLQ 369 (802)
T ss_dssp HTHHHHHHHTTCCCCCSSSEEEEHHHHHHHTTCC---CSSSSHHHHHHHHHHTTTCCEEECCCCCEEECC
T ss_pred HHHHhhHhhcCCceecccchhhhHHHHHHcCCcC---CCCcchHHHHHHHHHHcCCeEEEecCCEEEecC
Confidence 0 000123467999999999999874211 122359999998886555 4455555544443
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=73.78 E-value=31 Score=34.91 Aligned_cols=159 Identities=8% Similarity=-0.035 Sum_probs=79.6
Q ss_pred CeEEEEEeecCCCCCCcchhhhHHhhhhCCCeeeeCCCCCCCCCchHHHHHHHHHHHhCCCccEEEEEcCeeeecHHHHH
Q 017892 152 GIITRFVIGRSANRGDSLDQDIDSENKQTNDFFILDHHVEAPKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVYVNIDSLG 231 (364)
Q Consensus 152 ~i~v~FvvG~s~~~~~~~~~~I~~E~~~~~Dil~l~d~~Dsy~nLt~Kt~~~~~wa~~~~~a~f~lKvDDDvfVnl~~L~ 231 (364)
.+.++.|-..|.+ ...+.+++-.+.+..+.++. .+ |.. .-..+..+.+....+|++..|+|.++.++.|.
T Consensus 404 ~~eiivvdd~S~d---~t~~~~~~~~~~~~~i~~~~--~~---n~G--~~~a~n~g~~~a~g~~i~~ld~D~~~~~~~l~ 473 (625)
T 2z86_A 404 DLEVCICDDGSTD---DTLRILQEHYANHPRVRFIS--QK---NKG--IGSASNTAVRLCRGFYIGQLDSDDFLEPDAVE 473 (625)
T ss_dssp SEEEEEEEESCSS---SHHHHHHHHHTTCTTEEEEE--EC---CCC--HHHHHHHHHHHCCSSEEEECCTTCEECTTHHH
T ss_pred CeEEEEEECcCCh---hHHHHHHHHHhhCCcEEEEe--CC---CCC--HHHHHHHHHHhcCCCEEEEECCCcccChhHHH
Confidence 4566666655543 22333443334455555441 22 221 22344555554578999999999999999888
Q ss_pred HHHhhcC--CCCceEEEEeecCcccccCCCccccC-CccccCC-CCCcCcCccCCeEeeCHHHHHHHHHhcccCCCCCcc
Q 017892 232 ATLATHL--DKPRVYIGCMKSGDVFSEPGHKWYEP-DWWKFGD-KKLYFRHASGEMYVISRALAKFISINRSILRTYAHD 307 (364)
Q Consensus 232 ~~L~~~~--~~~~lyiG~~~~~~v~r~~~~Kwy~p-~~w~~y~-~~~Yp~y~~G~gYvlS~dla~~I~~~~~~l~~~~~E 307 (364)
.++.... +.-.+..|.... .++.+++... ..|..+. ......++.|.+.++.+++...+---... ....|
T Consensus 474 ~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ggfd~~--~~~~e 547 (625)
T 2z86_A 474 LCLDEFRKDLSLACVYTTNRN----IDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLTEGFNES--ISNAV 547 (625)
T ss_dssp HHHHHHHHCTTCSEEEEEEEE----ECTTSCEEEECCCCSSCCHHHHTTSCCCCSCEEEEHHHHTTTTCCCSS--CSSCH
T ss_pred HHHHHHHhCCCeeEEEeeeEE----ECCCCCEeccCcccccCCHHHHhhcccCCceEEEEHHHHHHhCCCCCc--cCChH
Confidence 8776542 333333332210 0111111110 0111111 11122346678889999876654321112 22469
Q ss_pred hHHHHHHHhcCC-CeEecCC
Q 017892 308 DVSAGSWFLGLD-VKYLNEG 326 (364)
Q Consensus 308 DV~vG~~l~~l~-V~~i~~~ 326 (364)
|.-+..-+...+ +.+++..
T Consensus 548 D~dl~~r~~~~g~~~~~~~~ 567 (625)
T 2z86_A 548 DYDMYLKLSEVGPFKHINKI 567 (625)
T ss_dssp HHHHHHHHTTTSCEEEEEEE
T ss_pred HHHHHHHHHHhCCEEEeCCc
Confidence 998876665444 4445443
No 11
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=46.73 E-value=27 Score=34.16 Aligned_cols=167 Identities=8% Similarity=-0.057 Sum_probs=87.0
Q ss_pred eEEEEEeecCCCCCCcchhhhHHhhh-hCCCee-eeCCCC-CC--CCCchHHHHHHHHHHHhCCCccEEEEEcCeee-ec
Q 017892 153 IITRFVIGRSANRGDSLDQDIDSENK-QTNDFF-ILDHHV-EA--PKEFPNKAKLFFAYAVDKWDAEYYAKVNDDVY-VN 226 (364)
Q Consensus 153 i~v~FvvG~s~~~~~~~~~~I~~E~~-~~~Dil-~l~d~~-Ds--y~nLt~Kt~~~~~wa~~~~~a~f~lKvDDDvf-Vn 226 (364)
..+++|-+.|.+.....-+++..+.. .++.-+ .+. .. .. -.....=...+++||...-+.++++.+|-|.- .+
T Consensus 29 ~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~-~~r~~~~n~GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~~ 107 (397)
T 2bo4_A 29 VHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRL-QERLGTLRPGKGDGMNTALRYFLEETQWERIHFYDADITSFG 107 (397)
T ss_dssp CCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEE-CCCCSSSSSSHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCC
T ss_pred eEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEe-cccCCCCCCCHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCCC
Confidence 46888888776521112222222332 344433 221 11 01 23455567788888874357899999999994 78
Q ss_pred HHHHHHHHhhcCCCCceEEEEeec---CcccccCCCccccCCccccCC--CCCcCcCccCCeEeeCHHHHHHHHHhc--c
Q 017892 227 IDSLGATLATHLDKPRVYIGCMKS---GDVFSEPGHKWYEPDWWKFGD--KKLYFRHASGEMYVISRALAKFISINR--S 299 (364)
Q Consensus 227 l~~L~~~L~~~~~~~~lyiG~~~~---~~v~r~~~~Kwy~p~~w~~y~--~~~Yp~y~~G~gYvlS~dla~~I~~~~--~ 299 (364)
++.+..+++...+.-.+.+|.... +..+.....++.... +|+ .....+...++.++++++++..+.... .
T Consensus 108 P~~i~~Ll~~l~~g~D~V~g~~~r~~~~~~~~~~~~~~ll~~---~~~~~~~~~i~dp~sG~~a~~R~vl~~l~~~~~~~ 184 (397)
T 2bo4_A 108 PDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFAL---LWPHTELSWIEQPLGGELLMRREVAAMLYEDERVR 184 (397)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHHH---HCTTSSGGGCSCTTCCCEEEEHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEeccccCCcHHHHHHHHHHHHH---HHHHhhccccccCCcccEEEeHHHHHHHhhhcccC
Confidence 887777776654334667775321 111111111110000 122 011223345778899999999885421 1
Q ss_pred cCCCCCcchHHHHHHH--hcCCCeEec
Q 017892 300 ILRTYAHDDVSAGSWF--LGLDVKYLN 324 (364)
Q Consensus 300 ~l~~~~~EDV~vG~~l--~~l~V~~i~ 324 (364)
..+.|. .|+.+...+ .++.|.-+.
T Consensus 185 ~~~~fg-~eiel~~~a~~~G~rI~EVp 210 (397)
T 2bo4_A 185 RRSDWG-IDTLYTFVTVQQGVSIYECY 210 (397)
T ss_dssp TCCSTT-HHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCcc-hHHHHHHHHHHcCCEEEEEE
Confidence 233343 366665544 355555443
No 12
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=32.55 E-value=1.9e+02 Score=25.85 Aligned_cols=117 Identities=15% Similarity=0.031 Sum_probs=68.6
Q ss_pred HhCCCccEEEEEcCe---eeecHHHHHHHHhhcCCCCceEEEEee-cCcccccCCCccccCCccccCCCCCcCcCccCCe
Q 017892 208 VDKWDAEYYAKVNDD---VYVNIDSLGATLATHLDKPRVYIGCMK-SGDVFSEPGHKWYEPDWWKFGDKKLYFRHASGEM 283 (364)
Q Consensus 208 ~~~~~a~f~lKvDDD---vfVnl~~L~~~L~~~~~~~~lyiG~~~-~~~v~r~~~~Kwy~p~~w~~y~~~~Yp~y~~G~g 283 (364)
.+..++++++.+|-| +-.+++.+..+|+. ..++.+|... .+-..-....+.|.-. +.+ .=-.||+.+.
T Consensus 49 l~~~~~dhllfIDAD~~~I~FdPe~V~rLl~~---g~DVV~GsYp~K~~~~~s~~a~~y~~~---i~~--~~V~d~~tGF 120 (203)
T 2c0n_A 49 LEMKDYDTLAFLDEDVVPIEIDFQKVEAKFNE---GYDVVCGYYYLKTLRGYSVYRKDWEKE---IFD--GEVNGCGLGF 120 (203)
T ss_dssp HHCTTCCEEEEECTTEEEEECCHHHHHHHHHH---TCSEEEEECBCTTSSSBSEESSSBCSS---CCC--EECSEECSSE
T ss_pred HhcCCCCEEEEEeCCCCccccCHHHHHHHHhC---CCCEEEEEeeccCCCccchHHHHHHHh---ccC--ceeeeccccE
Confidence 445789999999999 99999999999955 3568888742 2200000001111111 111 1234788899
Q ss_pred EeeCHHHHHHHHHhcc------cCCCCCcchHHHHHHHh-------cCCCeEecCCCcccCC
Q 017892 284 YVISRALAKFISINRS------ILRTYAHDDVSAGSWFL-------GLDVKYLNEGKFCCSS 332 (364)
Q Consensus 284 YvlS~dla~~I~~~~~------~l~~~~~EDV~vG~~l~-------~l~V~~i~~~~f~~~~ 332 (364)
.++++.+...|....- ..+..--|||++=.-.. ++..-|.=+.++--+.
T Consensus 121 ~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~~~~~~~~~~~~~~~~~~ 182 (203)
T 2c0n_A 121 TFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYALSSLKAYHFIDERLALSP 182 (203)
T ss_dssp EEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEEEEEEEEEEEESSSSEEECT
T ss_pred EEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEeccccccccccccccceeeccccccCc
Confidence 9999999998754321 12223459999866554 3333445455555443
No 13
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=31.25 E-value=70 Score=30.64 Aligned_cols=87 Identities=14% Similarity=0.144 Sum_probs=47.9
Q ss_pred HHHHHHHHhCCCccEEEEEcCeeeecHHHH---HHHHhhcCCCCceEEEEeec--CcccccCCCccccCCccccCCCCCc
Q 017892 201 KLFFAYAVDKWDAEYYAKVNDDVYVNIDSL---GATLATHLDKPRVYIGCMKS--GDVFSEPGHKWYEPDWWKFGDKKLY 275 (364)
Q Consensus 201 ~~~~~wa~~~~~a~f~lKvDDDvfVnl~~L---~~~L~~~~~~~~lyiG~~~~--~~v~r~~~~Kwy~p~~w~~y~~~~Y 275 (364)
..++.++.+...+++++.+|||..+.++=+ .+.|......++++ |+.. ......... -..+. .+ ..
T Consensus 88 ~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~--~ISa~n~~g~~~~~~-~~~~~--~l----yr 158 (343)
T 1fo8_A 88 RWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLW--CVSAWNDNGKEQMVD-SSKPE--LL----YR 158 (343)
T ss_dssp HHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEE--EEESCCTTCBGGGSC-TTCTT--CE----EE
T ss_pred HHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEE--EEecccCcccccccc-ccCcc--eE----Ee
Confidence 345555555457999999999999998655 44444344456664 3321 111000000 00111 00 12
Q ss_pred CcCccCCeEeeCHHHHHHHHH
Q 017892 276 FRHASGEMYVISRALAKFISI 296 (364)
Q Consensus 276 p~y~~G~gYvlS~dla~~I~~ 296 (364)
-.|..|-|+++++++-+.+-.
T Consensus 159 s~~f~~wGWa~wr~~W~e~~~ 179 (343)
T 1fo8_A 159 TDFFPGLGWLLLAELWAELEP 179 (343)
T ss_dssp ESSCCCSSEEEEHHHHHHHGG
T ss_pred ecCCCchhhhhcHHHHHHHhh
Confidence 234568899999999886543
No 14
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=22.13 E-value=4.5e+02 Score=23.89 Aligned_cols=91 Identities=12% Similarity=0.049 Sum_probs=49.8
Q ss_pred HHHHHhCCCccEEEEEcCeee-ecHHHHHHHHhhc--CCCCceEEEEeec----Ccc----cccCCCcccc---CCcc-c
Q 017892 204 FAYAVDKWDAEYYAKVNDDVY-VNIDSLGATLATH--LDKPRVYIGCMKS----GDV----FSEPGHKWYE---PDWW-K 268 (364)
Q Consensus 204 ~~wa~~~~~a~f~lKvDDDvf-Vnl~~L~~~L~~~--~~~~~lyiG~~~~----~~v----~r~~~~Kwy~---p~~w-~ 268 (364)
+..+.+....+|++.+|+|.. +.++.|..++... .+.-.+..|.... +.. .+...++... .... .
T Consensus 123 ~n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (329)
T 3ckj_A 123 LWRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATGGGRVTELVARPLLAA 202 (329)
T ss_dssp HHHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC---------------CHHHHHTHHHHHHH
T ss_pred HHHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccCCCceehhhHHHHHHH
Confidence 344444457899999999999 8988888877663 2344566676432 100 1111111110 0000 0
Q ss_pred cCCCCCcCcCccCCeEeeCHHHHHHH
Q 017892 269 FGDKKLYFRHASGEMYVISRALAKFI 294 (364)
Q Consensus 269 ~y~~~~Yp~y~~G~gYvlS~dla~~I 294 (364)
+++...-..++.|+.++++++++..+
T Consensus 203 ~~~~~~~~~~~~~g~~~~rr~~l~~i 228 (329)
T 3ckj_A 203 LRPELGCILQPLGGEYAATRELLTSV 228 (329)
T ss_dssp HCGGGGGCSCTTCSCEEEEHHHHTTS
T ss_pred hhhhhccccCCCccceeeeHHHHHhC
Confidence 11111123456788899999999877
No 15
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=22.07 E-value=38 Score=26.14 Aligned_cols=71 Identities=24% Similarity=0.331 Sum_probs=45.6
Q ss_pred EeCCCCCHHHHHHHHHHHhcCcchhhccccCCCeEEEEEeecCCCCCCcchhhhHHhhhhCC---CeeeeCCCCCCCCCc
Q 017892 120 ILTRFGRKNNRDAIRKAWMGTGAALKKRENEKGIITRFVIGRSANRGDSLDQDIDSENKQTN---DFFILDHHVEAPKEF 196 (364)
Q Consensus 120 V~S~~~~~~rR~aIR~TW~~~~~~lk~Le~~~~i~v~FvvG~s~~~~~~~~~~I~~E~~~~~---Dil~l~d~~Dsy~nL 196 (364)
|.|+.++.+-|+.|..- .. ...-.++||-|.+.+. -.+.+.|+++-| |+|-- -..++|
T Consensus 31 irtatssqdirdiiksm--kd---------ngkplvvfvngasqnd----vnefqneakkegvsydvlks----tdpeel 91 (112)
T 2lnd_A 31 IRTATSSQDIRDIIKSM--KD---------NGKPLVVFVNGASQND----VNEFQNEAKKEGVSYDVLKS----TDPEEL 91 (112)
T ss_dssp EEEECSHHHHHHHHHHH--TT---------CCSCEEEEECSCCHHH----HHHHHHHHHHHTCEEEEEEC----CCHHHH
T ss_pred eeeccchhhHHHHHHHH--Hh---------cCCeEEEEecCccccc----HHHHHHHHHhcCcchhhhcc----CCHHHH
Confidence 66777778888888653 11 1222478999988652 235566666554 44432 234578
Q ss_pred hHHHHHHHHHHHh
Q 017892 197 PNKAKLFFAYAVD 209 (364)
Q Consensus 197 t~Kt~~~~~wa~~ 209 (364)
+..+..+++.+-.
T Consensus 92 tqrvreflktags 104 (112)
T 2lnd_A 92 TQRVREFLKTAGS 104 (112)
T ss_dssp HHHHHHHHHHTTS
T ss_pred HHHHHHHHHhccc
Confidence 9999999998754
No 16
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=21.09 E-value=44 Score=32.38 Aligned_cols=109 Identities=16% Similarity=0.088 Sum_probs=58.7
Q ss_pred HHHHHHhCCCccEEEEEcCeee-ecHHHHHHHHhhcC--CCCceEEEEeec----Ccc-cccCCCc---ccc-CCccccC
Q 017892 203 FFAYAVDKWDAEYYAKVNDDVY-VNIDSLGATLATHL--DKPRVYIGCMKS----GDV-FSEPGHK---WYE-PDWWKFG 270 (364)
Q Consensus 203 ~~~wa~~~~~a~f~lKvDDDvf-Vnl~~L~~~L~~~~--~~~~lyiG~~~~----~~v-~r~~~~K---wy~-p~~w~~y 270 (364)
.+..+.+....+|++.+|.|.. +.++.|..++.... +.-.+.+|.... +.. .+...++ |.. +....++
T Consensus 170 A~n~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~~~~g~v~~~~~~~l~~~~~ 249 (387)
T 3f1y_A 170 AMWRALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEEDGGGRVTELTAKPLFNLFY 249 (387)
T ss_dssp HHHHHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------CCBCCSHHHHHTHHHHHHHHC
T ss_pred HHHHHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccccccCCchhhhhHHHHHHHHh
Confidence 4444455457899999999999 88888777776552 345677776421 101 0100111 100 0000001
Q ss_pred CCCCcCcCccCCeEeeCHHHHHHHHHhcccCCCCCcchHHHHHHH
Q 017892 271 DKKLYFRHASGEMYVISRALAKFISINRSILRTYAHDDVSAGSWF 315 (364)
Q Consensus 271 ~~~~Yp~y~~G~gYvlS~dla~~I~~~~~~l~~~~~EDV~vG~~l 315 (364)
+.-.-..++.|+.+++++++++.|- .-.-|..|.-.+-..+
T Consensus 250 ~~l~~~~d~~sG~~a~rR~~l~~i~----f~~gyg~e~ell~~~~ 290 (387)
T 3f1y_A 250 PELAGFVQPLAGEFVADRELFCSIP----FLTGYAVETGIMIDVL 290 (387)
T ss_dssp GGGTTCSCTTCSCEEEEHHHHTTSC----EECSTTHHHHHHHHHH
T ss_pred HhhccccccccccEEEEHHHHHhCC----CCCCcchHHHHHHHHH
Confidence 1001134457889999999998871 1244555555555443
Done!