BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017897
(364 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255582539|ref|XP_002532053.1| RNA-binding protein, putative [Ricinus communis]
gi|223528275|gb|EEF30325.1| RNA-binding protein, putative [Ricinus communis]
Length = 385
Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust.
Identities = 254/395 (64%), Positives = 289/395 (73%), Gaps = 41/395 (10%)
Query: 1 MAVAENAGAKIDSSNQNLDDTV--VSSDSNDVQNSND------HSKERSG------NGNA 46
MAVAENAGAK +S QN D TV VSSDSND++ S +SKE N N+
Sbjct: 1 MAVAENAGAKNATSGQNFDSTVTVVSSDSNDLERSKPRNESLVNSKESKDDDDVAVNNNS 60
Query: 47 NIQIQ----NG------------QTKPGAGAGGGFVNVNASDNHMERKMGESFKDCEMRD 90
++Q NG Q + A + NH ++ +M D
Sbjct: 61 KCELQESVTNGTQMQKRFDTSEQQQQIVAKSVVVNGGGGYGTNHQIQRAKSDNGLNDMSD 120
Query: 91 LVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTD-GTANTNGHTT 149
LV++LS LNPMA EFVPPSL N N + G NGFGYTNNF T+ G A N T
Sbjct: 121 LVEILSNLNPMAKEFVPPSLVN------NHGYLG-NGFGYTNNFPAQTNPGNAIGN---T 170
Query: 150 TRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR 209
+RK+N ++QG+RRMN RTS AQ+++VIRRTVYVSDIDQQVTEEQLA LF+ CGQVVDCR
Sbjct: 171 IKRKKNSFNQGRRRMNTRTSMAQREDVIRRTVYVSDIDQQVTEEQLAGLFVHCGQVVDCR 230
Query: 210 ICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSED 269
ICGDPNSVLRFAF+EFTDEEGARAAL+L+GT+LGFYP+RVLPSKTAIAPVNPTFLPRSED
Sbjct: 231 ICGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGFYPLRVLPSKTAIAPVNPTFLPRSED 290
Query: 270 EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESA 329
EREMC+RT+YCTNIDKKVTQ D++LFFES CGEVQRLRLLGDY HSTRIAFVEF +AESA
Sbjct: 291 EREMCARTVYCTNIDKKVTQADVRLFFESFCGEVQRLRLLGDYHHSTRIAFVEFTVAESA 350
Query: 330 IAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
I ALNCSGAVLGSLPIRVSPSKTPVRPR PR PLH
Sbjct: 351 ILALNCSGAVLGSLPIRVSPSKTPVRPRIPRSPLH 385
>gi|225455232|ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245327 [Vitis vinifera]
gi|302143972|emb|CBI23077.3| unnamed protein product [Vitis vinifera]
Length = 361
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 252/387 (65%), Positives = 287/387 (74%), Gaps = 49/387 (12%)
Query: 1 MAVAENAGAKIDSSNQNLDDTVVSSDSNDVQNS--NDHSKERSGNGNANIQIQNGQTKP- 57
MAV ENAG K+ SS+ N + S+D+ND S ++H+ + N+Q +N +KP
Sbjct: 1 MAVVENAGNKVGSSSANSE----SADTNDFGQSQPSNHTVMQ------NLQQKNTNSKPI 50
Query: 58 ------------------GAGAGGGFVNVNASDNHMERKMGESFKDC-EMRDLVDMLSKL 98
AG+ G + M G +D ++RDL D+LSKL
Sbjct: 51 LLPNDENYYSQKIPQFQQKAGSNG------VAKIQMVGSFGRDREDGGDIRDLEDLLSKL 104
Query: 99 NPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTD-GTANTNGHTTTRRKRNGY 157
NPMA EFVPPSLANG ++ AF GYTNNF++ + G AN N RRKRN Y
Sbjct: 105 NPMAEEFVPPSLANGHGWSAGAAF------GYTNNFVLQANFGNANGNA---GRRKRNNY 155
Query: 158 SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV 217
+Q KRR+N RTS AQ++EVI+RTVYVSDIDQQVTEE LA LF+ CGQVVDCRICGDPNSV
Sbjct: 156 NQ-KRRINSRTSMAQREEVIKRTVYVSDIDQQVTEEDLAALFINCGQVVDCRICGDPNSV 214
Query: 218 LRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT 277
LRFAFVEFTDEEGARAALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLPRSEDEREMC+RT
Sbjct: 215 LRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRSEDEREMCART 274
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSG 337
IYCTNIDKKVTQ ++KLFFES+CGEV RLRLLGDY HSTRIAFVEF MAESAIAALNCSG
Sbjct: 275 IYCTNIDKKVTQAEVKLFFESICGEVHRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSG 334
Query: 338 AVLGSLPIRVSPSKTPVRPRAPRPPLH 364
A+LGSLPIRVSPSKTPVRPRAPRP LH
Sbjct: 335 AILGSLPIRVSPSKTPVRPRAPRPALH 361
>gi|356516142|ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800126 [Glycine max]
Length = 369
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 241/365 (66%), Positives = 280/365 (76%), Gaps = 21/365 (5%)
Query: 1 MAVAENAGAKIDSSNQNLDDTVVSSDSNDVQNSNDHSKERSGNGNANIQIQNGQTKPGA- 59
MAV EN GAKI SS+Q+L++ VVS+DS +V+ S + NG N Q Q+ +T PG
Sbjct: 1 MAVVENVGAKIGSSSQSLENGVVSADSGEVEKSKTRGDQDMNNGVFNHQ-QHQETVPGTM 59
Query: 60 ---GAGGGFVNVNASDNH--------MERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPP 108
+ + N +N E GESFK +MRDL ++LSKLNPMA EFVPP
Sbjct: 60 PVPNGNFSYKHANGVNNDGYGMNGVMSEENGGESFKR-DMRDLEELLSKLNPMAEEFVPP 118
Query: 109 SLANGQIFNFNPAFFGPN-GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCR 167
SLAN GPN GFGYTNNFI+ + NTNG T RR++NGY+ GKRRMN +
Sbjct: 119 SLANTHGL-----LAGPNAGFGYTNNFIL-PNNYGNTNGQTNNRRRKNGYNPGKRRMNHK 172
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 227
+++E+IRRTVYVSDIDQ VTEEQLA LFL CGQVVDCR+CGDPNS+LRFAF+EFTD
Sbjct: 173 MDMEKREEMIRRTVYVSDIDQLVTEEQLAALFLNCGQVVDCRVCGDPNSILRFAFIEFTD 232
Query: 228 EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
+EGARAALSL+GTMLG+YP+RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK+
Sbjct: 233 DEGARAALSLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKL 292
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
TQ D+K FFES+CGEV RLRLLGDY HSTRIAFVEFA+AESAIAAL+CSG +LGSLPIRV
Sbjct: 293 TQADVKHFFESICGEVHRLRLLGDYHHSTRIAFVEFALAESAIAALSCSGVILGSLPIRV 352
Query: 348 SPSKT 352
SPSKT
Sbjct: 353 SPSKT 357
>gi|356509167|ref|XP_003523323.1| PREDICTED: uncharacterized protein LOC100787572 [Glycine max]
Length = 369
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/373 (65%), Positives = 284/373 (76%), Gaps = 37/373 (9%)
Query: 1 MAVAENAGAKIDSSNQNLDDTVVSSDSNDVQNSN------------DHSKERSG-----N 43
MAVAEN GAKI SS+Q+L++ +VS+DS +V+ S +H + G N
Sbjct: 1 MAVAENVGAKIGSSSQSLENGLVSADSGEVEKSKTKGDQNLNNGVFNHQERVPGTMPVPN 60
Query: 44 GNANIQIQ---NGQTKPGAGAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNP 100
GN + + Q NG G G G V + +N GESFK +MRDL ++LSKLNP
Sbjct: 61 GNFSYKAQMHANGVNNDGYGMNG----VTSGENG-----GESFKR-DMRDLEELLSKLNP 110
Query: 101 MAAEFVPPSLANGQIFNFNPAFFGPN-GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQ 159
MA EFVPPSLAN F GPN GFGYTNN I+ T+ NTNG T RR++NGY+
Sbjct: 111 MAEEFVPPSLANTHGF-----LAGPNAGFGYTNNIILPTN-YGNTNGQTNNRRRKNGYNP 164
Query: 160 GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
GKRRMN + +++E+IRRTVYVSDIDQ VTEEQLA LFL CGQVVDCR+CGDPNS+LR
Sbjct: 165 GKRRMNNKMDMEKREEMIRRTVYVSDIDQLVTEEQLAALFLNCGQVVDCRVCGDPNSILR 224
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 279
FAFVEFTDEEGARAALSL+GTMLG+YP+RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY
Sbjct: 225 FAFVEFTDEEGARAALSLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 284
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAV 339
CTNIDKK+TQ D+K FFES+CGEV RLRLLGDY HSTRIAFVEFA+AESAIAAL+CSG +
Sbjct: 285 CTNIDKKLTQADVKHFFESICGEVHRLRLLGDYHHSTRIAFVEFALAESAIAALSCSGVI 344
Query: 340 LGSLPIRVSPSKT 352
LGSLPIRVSPSKT
Sbjct: 345 LGSLPIRVSPSKT 357
>gi|356516140|ref|XP_003526754.1| PREDICTED: uncharacterized protein LOC100799585 [Glycine max]
Length = 378
Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust.
Identities = 250/388 (64%), Positives = 289/388 (74%), Gaps = 34/388 (8%)
Query: 1 MAVAENAGAKIDSSNQNLDDTVVSSDSNDVQNS-------NDHSKERSG----------- 42
MAVAEN GAKI SS+QNL+++VVSSDS +V+ S ND K +G
Sbjct: 1 MAVAENVGAKIGSSSQNLENSVVSSDSGEVEKSKPRSGSINDDQKLNNGVFNHQDRVPGT 60
Query: 43 ----NGNANIQIQNGQTKPGA--GAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLS 96
N N N Q GQ G G V + +N GESFK +MRDL ++LS
Sbjct: 61 MPVPNSNYNYNAQMGQMHANGVNNDGYGMNGVMSGENE-----GESFKR-DMRDLEELLS 114
Query: 97 KLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNG 156
KLNPMA EFVPPSL+N + P GFGY NNFI+ + N NG T RR++NG
Sbjct: 115 KLNPMAEEFVPPSLSNTHGYLAGPGAG--AGFGYPNNFIL-LNNFGNANGQTN-RRRKNG 170
Query: 157 YSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS 216
Y+QGKRR+N + +++E+ RRTVYVSDIDQ VTEEQLA LFL CGQVVDCR+CGDPNS
Sbjct: 171 YNQGKRRVNHKMDMEKREEMTRRTVYVSDIDQLVTEEQLAALFLNCGQVVDCRVCGDPNS 230
Query: 217 VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
+LRFAF+EFTDEEGARAAL+L+GTMLG+YP+RVLPSKTAIAPVNPTFLPRSEDEREMCSR
Sbjct: 231 ILRFAFIEFTDEEGARAALNLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSR 290
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCS 336
TIYCTNIDKK+TQ D+K FFES+CGEVQRLRLLGDY HSTRIAFVEF +AESAIAAL+CS
Sbjct: 291 TIYCTNIDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRIAFVEFTVAESAIAALSCS 350
Query: 337 GAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
G +LGSLPIRVSPSKTPVR RAPRP +H
Sbjct: 351 GVILGSLPIRVSPSKTPVRSRAPRPTMH 378
>gi|357464159|ref|XP_003602361.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355491409|gb|AES72612.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 384
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/390 (62%), Positives = 286/390 (73%), Gaps = 32/390 (8%)
Query: 1 MAVAENAGAKIDSSNQNLDDTVVSSDSNDV---------QNSNDHSKERSGNGNANIQIQ 51
MAVAEN G KIDSS++NLD++VVSSDS +V QN N +S + G N Q Q
Sbjct: 1 MAVAENVGTKIDSSSENLDNSVVSSDSTEVVEKSKPKTDQNLNTNSVNTNVVGVINHQQQ 60
Query: 52 NGQTKPGAG---------AGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMA 102
+ G G G N + D + GESFK EMRDL ++LSKLNPMA
Sbjct: 61 DSVPNGNHGFIAHQMSQMHGNGVQNQHLVDGYGGNG-GESFKR-EMRDLEELLSKLNPMA 118
Query: 103 AEFVPPSLANGQIFNFNPAFF-GPN-GFGY-TNNFIMHTDGTANTNGHTTT-----RRKR 154
EFVPPSL + N++ GPN GFGY NNF++ + T RR++
Sbjct: 119 EEFVPPSL----VTNYHGYLAAGPNAGFGYPNNNFMLQNNFGNANANATANNGQINRRRK 174
Query: 155 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 214
NGY+ KRR+ + +++E+IRRTVYVSDIDQQVTEEQLA LFL CGQVVDCR+CGDP
Sbjct: 175 NGYNNAKRRVYHKMDMEKREEMIRRTVYVSDIDQQVTEEQLAALFLNCGQVVDCRVCGDP 234
Query: 215 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC 274
NS+LRFAFVEFTDE GARAAL+L+GTMLG+YP+RVLPSKTAIAPVNPTFLPRSEDEREMC
Sbjct: 235 NSILRFAFVEFTDEVGARAALNLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMC 294
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN 334
+RTIYCTN+DKK+TQ D+K FFES+CGEVQRLRLLGDY HSTRIAFVEFA+AESAIAAL+
Sbjct: 295 TRTIYCTNLDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRIAFVEFAVAESAIAALS 354
Query: 335 CSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
CSG VLGSLPIRVSPSKTPVR RA R P+H
Sbjct: 355 CSGVVLGSLPIRVSPSKTPVRARAVRTPMH 384
>gi|388492572|gb|AFK34352.1| unknown [Medicago truncatula]
Length = 376
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/384 (63%), Positives = 282/384 (73%), Gaps = 30/384 (7%)
Query: 1 MAVAENAGAKIDSSNQNLDDT---VVSSDSNDVQNSNDHSKERSGNGNA-NIQIQNGQTK 56
MAVAEN GAKI SS+QNLD+ VSSDS +V+ S + + N + N Q QNG
Sbjct: 1 MAVAENVGAKIGSSSQNLDNNNNHAVSSDSTEVEKSKPRTDQDVNNNSVFNHQHQNGNYS 60
Query: 57 PGAGAGGGFVNVNASDNHM---------------ERKMGESFKDCEMRDLVDMLSKLNPM 101
G ++ N NH GESFK EMRDL ++LSKLNPM
Sbjct: 61 FKTHQMGQ-MHANGVQNHQFVVNNDGYVMNGLRNGENGGESFKR-EMRDLEELLSKLNPM 118
Query: 102 AAEFVPPSLANGQIFNFNPAFFGPN-GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYS-Q 159
A EFVPPSL N N GP GFGY NNFI+ + AN NG T RR++NGY+
Sbjct: 119 AEEFVPPSLTN----NHGYLAAGPAAGFGYPNNFIL-LNNYANANGQTN-RRRKNGYTTN 172
Query: 160 GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
GKRR N + +++E+IRRTVY SDIDQ VTEEQLA+LFL CGQVVDCR+C DPNS+LR
Sbjct: 173 GKRRANHKVDMEKREEMIRRTVYASDIDQLVTEEQLASLFLNCGQVVDCRVCRDPNSILR 232
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 279
FAF+EFTDEE ARAA+SL+GTMLG+YP+RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY
Sbjct: 233 FAFIEFTDEESARAAVSLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 292
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAV 339
CTNIDKK+TQ D+K FFES+CGEV RLRLLGDYQHSTRIAFVEFA+AESAIAAL+CSG +
Sbjct: 293 CTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHSTRIAFVEFAVAESAIAALSCSGVI 352
Query: 340 LGSLPIRVSPSKTPVRPR-APRPP 362
LG+LPIRVSPSKTPVR R +PR P
Sbjct: 353 LGALPIRVSPSKTPVRARSSPRSP 376
>gi|449438861|ref|XP_004137206.1| PREDICTED: uncharacterized protein LOC101204595 [Cucumis sativus]
Length = 403
Score = 450 bits (1157), Expect = e-124, Method: Compositional matrix adjust.
Identities = 243/411 (59%), Positives = 293/411 (71%), Gaps = 55/411 (13%)
Query: 1 MAVAENAGAKIDSSNQNLDDTVVSSDSND---VQN--------------SNDHSKERSGN 43
MAVAEN G KI S +Q LD+T+VSSDSND V+N S+ H N
Sbjct: 1 MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60
Query: 44 GNANIQIQN--------------------GQTKPGAGAGGGFVNVNASDNH-MERKM--- 79
+ +Q+ GQ + G + VN++ + M ++
Sbjct: 61 LQKKVHLQDRAAAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120
Query: 80 ------GESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNN 133
G++FK +MRDL ++LSKLNPMA EFVPPSLA NF+ F G G GYTN+
Sbjct: 121 INGADGGDTFKR-DMRDLEELLSKLNPMAEEFVPPSLAK----NFSGYFTGA-GLGYTND 174
Query: 134 FIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEE 193
F++ + N ++ RRK+NG+SQG+RRMN + + ++DE+ RRTVYVSDIDQQVTEE
Sbjct: 175 FLLQPNSVNNEGNNS--RRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEE 232
Query: 194 QLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK 253
LAT+F +CG+VVDCRICGDPNS+L FAF+EFTDEEGARA+L+L+GT+LGFYPVRVLPSK
Sbjct: 233 LLATVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSK 292
Query: 254 TAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ 313
TAIAPVNP FLPRS+DEREMCSRTIYCTNIDKKVTQ ++KLFFES+CGEVQRLRLLGDY
Sbjct: 293 TAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYH 352
Query: 314 HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
HSTRIAFVEF MAESAIAALNCSG VLGSLPIRVSPSKTPVRPR+PR L+
Sbjct: 353 HSTRIAFVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 403
>gi|359474160|ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vitis vinifera]
Length = 398
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/332 (69%), Positives = 258/332 (77%), Gaps = 26/332 (7%)
Query: 33 SNDHSKERSGNGNANIQIQNGQTKPGAGAGGGFVNVNASDNHMERKMGESFKDCEMRDLV 92
S H+ +RS I +QN Q P A ++ H++R G+S D MR+L
Sbjct: 93 SVQHNLDRS----QKIGVQNMQVGPVAAQH------RSNGGHLQRN-GDSGVD--MRELQ 139
Query: 93 DMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRR 152
++ SKLNPMA EFVPPSLAN G NG Y+N H + NG RR
Sbjct: 140 ELFSKLNPMAEEFVPPSLANN----------GLNGGFYSNGSETHNN---TRNGQVNGRR 186
Query: 153 KRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 212
K+N + QGKRRMN RTS AQ++E+IRRTVYVSDIDQQVTEE+LA LF+TCGQVVDCR+CG
Sbjct: 187 KKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQVTEEKLAALFITCGQVVDCRVCG 246
Query: 213 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE 272
DPNSVLRFAFVEFTDEEGARAALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLPR+EDERE
Sbjct: 247 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRNEDERE 306
Query: 273 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA 332
MC+RTIYCTNIDKKV+Q D+KLFFESVCGEV RLRLLGDY HSTRIAFVEF MAESAIAA
Sbjct: 307 MCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFIMAESAIAA 366
Query: 333 LNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
LNCSG VLGSLPIRVSPSKTPVRPRAPR P+H
Sbjct: 367 LNCSGVVLGSLPIRVSPSKTPVRPRAPRLPIH 398
>gi|357464151|ref|XP_003602357.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|355491405|gb|AES72608.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 384
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 247/392 (63%), Positives = 284/392 (72%), Gaps = 38/392 (9%)
Query: 1 MAVAENAGAKIDSSNQNLDDT---VVSSDSNDVQNSNDHSKERSGNGNA-NIQIQNGQTK 56
MAVAEN GAKI SS+QNLD+ VSSDS +V+ S + + N + N Q QNG
Sbjct: 1 MAVAENVGAKIGSSSQNLDNNNNHAVSSDSTEVEKSKPRTDQDVNNNSVFNHQHQNGNYS 60
Query: 57 PGAGAGGGFVNVNASDNHM---------------ERKMGESFKDCEMRDLVDMLSKLNPM 101
G ++ N NH GESFK EMRDL ++LSKLNPM
Sbjct: 61 FKTHQMGQ-MHANGVQNHQFVVNNDGYVMNGLRNGENGGESFKR-EMRDLEELLSKLNPM 118
Query: 102 AAEFVPPSLANGQIFNFNPAFFGPN-GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYS-Q 159
A EFVPPSL N N GP GFGY NNFI+ + AN NG T RR++NGY+
Sbjct: 119 AEEFVPPSLTN----NHGYLAAGPAAGFGYPNNFIL-LNNYANANGQTN-RRRKNGYTTN 172
Query: 160 GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
GKRR N + +++E+IRRTVYVSDIDQ VTEEQLA+LFL CGQVVDCR+CGDPNS+LR
Sbjct: 173 GKRRANHKVDMEKREEMIRRTVYVSDIDQLVTEEQLASLFLNCGQVVDCRVCGDPNSILR 232
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 279
FAF+EFTDEE ARAA+SL+GTMLG+YP+RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY
Sbjct: 233 FAFIEFTDEESARAAVSLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 292
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM--------AESAIA 331
CTNIDKK+TQ D+K FFES+CGEV RLRLLGDYQHSTRIAFVEFA+ AESAIA
Sbjct: 293 CTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHSTRIAFVEFAVIFFASFFQAESAIA 352
Query: 332 ALNCSGAVLGSLPIRVSPSKTPVRPR-APRPP 362
AL+CSG +LG+LPIRVSPSKTPVR R +PR P
Sbjct: 353 ALSCSGVILGALPIRVSPSKTPVRARSSPRSP 384
>gi|297742454|emb|CBI34603.3| unnamed protein product [Vitis vinifera]
Length = 397
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 231/332 (69%), Positives = 257/332 (77%), Gaps = 27/332 (8%)
Query: 33 SNDHSKERSGNGNANIQIQNGQTKPGAGAGGGFVNVNASDNHMERKMGESFKDCEMRDLV 92
S H+ +RS I +QN Q P A ++ H++R G+S D MR+L
Sbjct: 93 SVQHNLDRS----QKIGVQNMQVGPVAAQH------RSNGGHLQRN-GDSGVD--MRELQ 139
Query: 93 DMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRR 152
++ SKLNPMA EFVPPSLAN G NG Y+N H + NG RR
Sbjct: 140 ELFSKLNPMAEEFVPPSLANN----------GLNGGFYSNGSETHNN---TRNGQVNGRR 186
Query: 153 KRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 212
K N + QGKRRMN RTS AQ++E+IRRTVYVSDIDQQVTEE+LA LF+TCGQVVDCR+CG
Sbjct: 187 K-NNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQVTEEKLAALFITCGQVVDCRVCG 245
Query: 213 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE 272
DPNSVLRFAFVEFTDEEGARAALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLPR+EDERE
Sbjct: 246 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRNEDERE 305
Query: 273 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA 332
MC+RTIYCTNIDKKV+Q D+KLFFESVCGEV RLRLLGDY HSTRIAFVEF MAESAIAA
Sbjct: 306 MCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFIMAESAIAA 365
Query: 333 LNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
LNCSG VLGSLPIRVSPSKTPVRPRAPR P+H
Sbjct: 366 LNCSGVVLGSLPIRVSPSKTPVRPRAPRLPIH 397
>gi|255555781|ref|XP_002518926.1| RNA-binding protein, putative [Ricinus communis]
gi|223541913|gb|EEF43459.1| RNA-binding protein, putative [Ricinus communis]
Length = 379
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/347 (65%), Positives = 262/347 (75%), Gaps = 13/347 (3%)
Query: 26 DSNDVQNSNDHSKERSGNGNANIQIQNGQTKPGAGAGGGFVNVNASDNHMERKMGESFKD 85
D ++ NS+DH + N +I IQ K + + V +H +R G
Sbjct: 38 DHSNHNNSHDHGRSLIEN---SISIQPLYMKAQVQSPPPNLQVAQLHHHHQRSSGGGDLQ 94
Query: 86 CEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFG---YTNN-----FIMH 137
++R+L ++ SKLNPMA EFVPPSLAN +I N G NG YTNN M
Sbjct: 95 RDIRELQELFSKLNPMAEEFVPPSLANNKISN--NYIHGLNGLNVGFYTNNNNYDPAFML 152
Query: 138 TDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLAT 197
T+ + N + + R++ Y+QGKRR+N RTS AQ++E+IRRTVYVSDIDQQVTEEQLA
Sbjct: 153 TNASRNGQLNGSAARRKKNYNQGKRRLNSRTSMAQREEIIRRTVYVSDIDQQVTEEQLAA 212
Query: 198 LFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIA 257
LF+ CGQVVDCRICGDPNSVLRFAF+EFT EEGARAAL+LAGT+LG+YPVRVLPSKTAIA
Sbjct: 213 LFVGCGQVVDCRICGDPNSVLRFAFIEFTHEEGARAALNLAGTVLGYYPVRVLPSKTAIA 272
Query: 258 PVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR 317
PVNPTFLPRS+DEREMC RTIYCTNIDKKVTQ D+KLFFESVCGEV RLRLLGDY HSTR
Sbjct: 273 PVNPTFLPRSDDEREMCIRTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR 332
Query: 318 IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
IAFVEF MAESAIAALNCSG VLGSLPIRVSPSKTPVRPRAPR P+H
Sbjct: 333 IAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRIPMH 379
>gi|449483221|ref|XP_004156526.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Cucumis
sativus]
Length = 316
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 210/285 (73%), Positives = 245/285 (85%), Gaps = 8/285 (2%)
Query: 80 GESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTD 139
G++FK +MRDL ++LSKLNPMA EFVPPSLA NF+ F G G GYTN+F++ +
Sbjct: 40 GDTFKR-DMRDLEELLSKLNPMAEEFVPPSLAK----NFSGYFTGA-GLGYTNDFLLQPN 93
Query: 140 GTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF 199
N ++ RRK+NG+SQG+RRMN + + ++DE+ RRTVYVSDIDQQVTEE LAT+F
Sbjct: 94 SVNNEGNNS--RRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVF 151
Query: 200 LTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPV 259
+CG+VVDCRICGDPNS+L FAF+EFTDEEGARA+L+L+GT+LGFYPVRVLPSKTAIAPV
Sbjct: 152 ASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPV 211
Query: 260 NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIA 319
NP FLPRS+DEREMCSRTIYCTNIDKKVTQ ++KLFFES+CGEVQRLRLLGDY HSTRIA
Sbjct: 212 NPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIA 271
Query: 320 FVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
FVEF MAESAIAALNCSG VLGSLPIRVSPSKTPVRPR+PR L+
Sbjct: 272 FVEFTMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRAQLN 316
>gi|297809287|ref|XP_002872527.1| RNA-binding protein 37 [Arabidopsis lyrata subsp. lyrata]
gi|297318364|gb|EFH48786.1| RNA-binding protein 37 [Arabidopsis lyrata subsp. lyrata]
Length = 336
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 234/370 (63%), Positives = 264/370 (71%), Gaps = 40/370 (10%)
Query: 1 MAVAENAGAKIDSSNQNL----DDTVVSSDSNDVQNSNDHSKERSGNGNANIQIQNGQTK 56
MAV E+ GA L + V+S + V ++NDH G I + G
Sbjct: 1 MAVIESVGANTTVEAGGLISPSPPSSVTSQESGVSSNNDH-------GGNEIHGEIG--- 50
Query: 57 PGAGAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIF 116
V+V SD ESFK +MR+L ++LSKLNPMA EFVPPSL +
Sbjct: 51 ---------VHVARSDGD------ESFKR-DMRELHELLSKLNPMAKEFVPPSLTKPVVN 94
Query: 117 NFNPAFFGPN-GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDE 175
FN FF N GFG NF ++ DG RRK++ QGKRRMN RTS AQ++E
Sbjct: 95 GFNGGFFAVNNGFGAAGNFPVNEDGG--------FRRKKSFGQQGKRRMNPRTSLAQREE 146
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
+IRRTVYVSDIDQQVTEEQLA LF+ GQVVDCRICGDPNSVLRFAF+EFTDE GARAAL
Sbjct: 147 IIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARAAL 206
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
SL+GTMLGFYPV+V+PSKTAIAPVNPTFLPR+EDEREMC+RTIYCTNIDKK+TQ DIKLF
Sbjct: 207 SLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQADIKLF 266
Query: 296 FESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
FESVCGEV RLRLLGDY H TRI FVEF MAESAIAALNCSG +LGSLPIRVSPSKTPVR
Sbjct: 267 FESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNCSGVLLGSLPIRVSPSKTPVR 326
Query: 356 PRA-PRPPLH 364
RA PR +H
Sbjct: 327 SRAVPRHQMH 336
>gi|15223304|ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
gi|6714278|gb|AAF25974.1|AC017118_11 F6N18.17 [Arabidopsis thaliana]
gi|332193408|gb|AEE31529.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
Length = 358
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/285 (74%), Positives = 237/285 (83%), Gaps = 2/285 (0%)
Query: 80 GESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTD 139
GESFK +MR+L ++ SKLNPMA EFVPPSL N FF G + NN T
Sbjct: 76 GESFKR-DMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGFAGTG 134
Query: 140 GTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF 199
N + RRK++ + QGKRRMN RTS AQ+++VIRRTVYVSD+DQQVTEEQLA LF
Sbjct: 135 NGGYGNENGGFRRKKS-FGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLF 193
Query: 200 LTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPV 259
++CGQVVDCRICGDPNSVLRFAF+EFTDEEGA AL+L+GTMLGFYPV+VLPSKTAIAPV
Sbjct: 194 VSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPV 253
Query: 260 NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIA 319
NPTFLPR+EDEREMC+RTIYCTNIDKKVTQ D+K+FFES CGEV RLRLLGDYQHSTRIA
Sbjct: 254 NPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIA 313
Query: 320 FVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
FVEF MAESAIAALNCSG VLGSLPIRVSPSKTPVRPR+PR P+H
Sbjct: 314 FVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRHPMH 358
>gi|297819578|ref|XP_002877672.1| hypothetical protein ARALYDRAFT_485298 [Arabidopsis lyrata subsp.
lyrata]
gi|297323510|gb|EFH53931.1| hypothetical protein ARALYDRAFT_485298 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 229/374 (61%), Positives = 265/374 (70%), Gaps = 41/374 (10%)
Query: 1 MAVAENAGAKIDSSN-QNLDDTVVSSDSNDVQNSNDHSKERSGNGNA------------- 46
MAVAENAG K+DSS+ QNLD+ S+ +D +S + N
Sbjct: 1 MAVAENAGVKVDSSSGQNLDNNTDSATETKPPCPDDDQSPKSDSSNPPTIDSTPETDDRI 60
Query: 47 NIQIQNGQTKPGAGAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFV 106
N Q GQT GF + GE + E++DL D SKLNPMA EFV
Sbjct: 61 NETAQKGQTL------NGF-----------NRNGERDNNGEIKDLADAFSKLNPMAQEFV 103
Query: 107 PPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNC 166
PPSLA Q F NG G+TNNF A+ N H TRR+ + QGKRR+N
Sbjct: 104 PPSLARSQSGVFR------NGLGFTNNFAAPPK-LADGNDHFPTRRR--SFGQGKRRINK 154
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 226
RTS AQ+D+VIRRTVYVSDIDQQVTEE LA +F+ CGQVVDCR+CGDPNSVLRFAF+EFT
Sbjct: 155 RTSLAQKDDVIRRTVYVSDIDQQVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFT 214
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 286
+EEGARAALS++GT+LGFYP++VLPSKTAIAPVNPTFLPRSEDEREMC RT+YCTNIDK+
Sbjct: 215 NEEGARAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNIDKR 274
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIR 346
+TQ D+K+FFE +CGEV RLR LGDY H TRIAFVEFAMAESAIAAL+CSG VLG+LPIR
Sbjct: 275 ITQIDLKVFFEMLCGEVHRLR-LGDYHHQTRIAFVEFAMAESAIAALHCSGIVLGALPIR 333
Query: 347 VSPSKTPVRPRAPR 360
VSPSKTPVRP PR
Sbjct: 334 VSPSKTPVRPHFPR 347
>gi|255646437|gb|ACU23697.1| unknown [Glycine max]
Length = 291
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 212/288 (73%), Positives = 242/288 (84%), Gaps = 3/288 (1%)
Query: 77 RKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIM 136
R GESFK +MRDL ++LSKLNPMA EFVPPSL N + P GFGY NNFI+
Sbjct: 7 RMGGESFKR-DMRDLEELLSKLNPMAEEFVPPSLTNTHGYLPGPGAGAGAGFGYPNNFIL 65
Query: 137 HTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLA 196
+ + NG T RR++NGY+ GKRR+N + +++E+IRRTVYVSDIDQ VTEEQLA
Sbjct: 66 -LNNFGDANGQTN-RRRKNGYNHGKRRVNHKMDMEKREEMIRRTVYVSDIDQLVTEEQLA 123
Query: 197 TLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
LFL CGQVVD R+CGDPNS+LRFAFVEFTDE+GARAAL+L+GTMLG+YP+RVLPSKTAI
Sbjct: 124 GLFLNCGQVVDYRVCGDPNSILRFAFVEFTDEDGARAALNLSGTMLGYYPLRVLPSKTAI 183
Query: 257 APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHST 316
APVNPTFLPRSEDEREMCSRTIYCTNIDKK+TQ D+K FFES+CGEVQRLRLLGDY HST
Sbjct: 184 APVNPTFLPRSEDEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVQRLRLLGDYHHST 243
Query: 317 RIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
RIAFVEF +AESAIAAL+CSG +LGSLPIRVSPSKTPVR RAPRP +H
Sbjct: 244 RIAFVEFTVAESAIAALSCSGVILGSLPIRVSPSKTPVRSRAPRPSMH 291
>gi|15235177|ref|NP_192799.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
gi|4115925|gb|AAD03436.1| contains similarity to RNA recognition motifs (Pfam: PF00076,
Score=5.5e-23, N=2) [Arabidopsis thaliana]
gi|4539439|emb|CAB40027.1| RNA-binding protein [Arabidopsis thaliana]
gi|4959384|gb|AAD34325.1| RNA-binding protein [Arabidopsis thaliana]
gi|7267758|emb|CAB78184.1| RNA-binding protein [Arabidopsis thaliana]
gi|14517528|gb|AAK62654.1| AT4g10610/T4F9_70 [Arabidopsis thaliana]
gi|18700204|gb|AAL77712.1| AT4g10610/T4F9_70 [Arabidopsis thaliana]
gi|21592407|gb|AAM64358.1| RNA-binding protein [Arabidopsis thaliana]
gi|332657507|gb|AEE82907.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
Length = 336
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/370 (62%), Positives = 265/370 (71%), Gaps = 40/370 (10%)
Query: 1 MAVAENAGAKIDSSNQNL----DDTVVSSDSNDVQNSNDHSKERSGNGNANIQIQNGQTK 56
MAV E+ GA L + V+S + ++NDH GNG I + G
Sbjct: 1 MAVIESVGANTTVEAGGLISPSPPSSVTSQESGASSNNDHG----GNG---IHDEIG--- 50
Query: 57 PGAGAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIF 116
V+V SD GESFK +MR+L ++LSKLNPMA EF+PPSL +
Sbjct: 51 ---------VHVARSDG------GESFKR-DMRELHELLSKLNPMAKEFIPPSLTKPVVN 94
Query: 117 NFNPAFFGPN-GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDE 175
FN FF N GF NF ++ DG+ RRK++ QGKRRMN RTS AQ++E
Sbjct: 95 GFNGGFFAVNNGFVAAGNFPVNEDGS--------FRRKKSFGQQGKRRMNPRTSLAQREE 146
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
+IRRTVYVSDIDQQVTEEQLA LF+ GQVVDCRICGDPNSVLRFAF+EFTDE GAR AL
Sbjct: 147 IIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARTAL 206
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
+L+GTMLGFYPV+V+PSKTAIAPVNPTFLPR+EDEREMC+RTIYCTNIDKK+TQ DIKLF
Sbjct: 207 NLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQTDIKLF 266
Query: 296 FESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
FESVCGEV RLRLLGDY H TRI FVEF MAESAIAALNCSG +LGSLPIRVSPSKTPVR
Sbjct: 267 FESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNCSGVLLGSLPIRVSPSKTPVR 326
Query: 356 PRA-PRPPLH 364
RA PR +H
Sbjct: 327 SRAIPRHQMH 336
>gi|168046548|ref|XP_001775735.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672887|gb|EDQ59418.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 256
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/278 (73%), Positives = 228/278 (82%), Gaps = 23/278 (8%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGH 147
MR+L D+L+KLNP+A EFVPPS A+ + T ++
Sbjct: 1 MRELEDLLTKLNPLAKEFVPPSHAD----------------------LASTTAPSSVASS 38
Query: 148 TTTRRKRNGYSQ-GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 206
RK+NG++Q KRR+N RTS AQ+++ IRRTVYVSDIDQQVTEEQLA LF+TCGQVV
Sbjct: 39 KGQPRKKNGFNQVNKRRVNSRTSRAQREDSIRRTVYVSDIDQQVTEEQLAALFITCGQVV 98
Query: 207 DCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 266
DCR+CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLG+YPVRVLPSKTAI PVNPTFLPR
Sbjct: 99 DCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIVPVNPTFLPR 158
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 326
SEDEREMC+RTIYCTNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF MA
Sbjct: 159 SEDEREMCARTIYCTNIDKKVSQADVKLFFESLCGEVARLRLLGDYHHSTRIAFVEFVMA 218
Query: 327 ESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
ESA+AALNCSGA+LGSLPIRVSPSKTPVRPR+PR PLH
Sbjct: 219 ESAMAALNCSGAILGSLPIRVSPSKTPVRPRSPRSPLH 256
>gi|15229132|ref|NP_190508.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
gi|79314662|ref|NP_001030833.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
gi|12324442|gb|AAG52182.1|AC012329_9 putative RNA-binding protein; 38450-35693 [Arabidopsis thaliana]
gi|6723409|emb|CAB66418.1| RNA-binding-like protein [Arabidopsis thaliana]
gi|222424104|dbj|BAH20012.1| AT3G49390 [Arabidopsis thaliana]
gi|332645014|gb|AEE78535.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
gi|332645015|gb|AEE78536.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
Length = 353
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/370 (60%), Positives = 260/370 (70%), Gaps = 31/370 (8%)
Query: 1 MAVAENAGAKIDSSNQNLDDTVVSSDS----------NDVQNSNDHSKERSGNGNANIQI 50
MAVAENAG K+DSS QNLD+ ++ + +D +D S + +
Sbjct: 1 MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLTIDSTPETDD 60
Query: 51 QNGQTKPGAGAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSL 110
+ +T GF DN + E++DL D SKLNPMA EFVPPSL
Sbjct: 61 RINETAQKVQTLNGFSGNGERDN-----------NGEIKDLADAFSKLNPMAQEFVPPSL 109
Query: 111 ANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSN 170
A Q NG G+TNNF A+ N H R+R + QGKRRMN RTS
Sbjct: 110 ARSQSGVLR------NGLGFTNNFAAPPK-LADGNDHFP--RRRRSFGQGKRRMNKRTSL 160
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
AQ+D+VIRRTVYVSDIDQQVTEE LA +F+ CGQVVDCR+CGDPNSVLRFAF+EFT+EEG
Sbjct: 161 AQKDDVIRRTVYVSDIDQQVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEG 220
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
ARAALS++GT+LGFYP++VLPSKTAIAPVNPTFLPRSEDEREMC RT+YCTNIDK++TQ
Sbjct: 221 ARAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNIDKRITQI 280
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 350
D+K FFE +CGEV RLR LGDY H TRIAFVEFAMAESAIAAL+CSG VLG+LPIRVSPS
Sbjct: 281 DLKGFFEMLCGEVHRLR-LGDYHHQTRIAFVEFAMAESAIAALHCSGIVLGALPIRVSPS 339
Query: 351 KTPVRPRAPR 360
KTPVRP PR
Sbjct: 340 KTPVRPHFPR 349
>gi|1174153|gb|AAA86641.1| RNA-binding protein [Arabidopsis thaliana]
Length = 336
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 230/370 (62%), Positives = 263/370 (71%), Gaps = 40/370 (10%)
Query: 1 MAVAENAGAKIDSSNQNL----DDTVVSSDSNDVQNSNDHSKERSGNGNANIQIQNGQTK 56
MAV E+ GA L + V+S + ++NDH GNG I + G
Sbjct: 1 MAVIESVGANTTVEAGGLISPSPPSSVTSQESGASSNNDHG----GNG---IHDEIG--- 50
Query: 57 PGAGAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIF 116
V+V SD GESFK +MR+L ++LSKLNPMA EF+PPSL +
Sbjct: 51 ---------VHVARSDG------GESFKR-DMRELHELLSKLNPMAKEFIPPSLTKPVVN 94
Query: 117 NFNPAFFGPN-GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDE 175
FN FF N GF NF ++ DG+ RRK++ QGKRRMN RTS AQ++E
Sbjct: 95 GFNGGFFAVNNGFVAAGNFPVNEDGSF--------RRKKSFGQQGKRRMNPRTSLAQREE 146
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
+IRRTVYVSDI QQVTEEQLA LF+ GQVVDCRICGDPNSVLRFAF+EFTDE GAR AL
Sbjct: 147 IIRRTVYVSDIYQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARTAL 206
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
+L+GTMLGFYPV+V+PSKTAIAPVNPTFLPR+EDEREMC+RTIYCTNIDKK+TQ DIKLF
Sbjct: 207 NLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQTDIKLF 266
Query: 296 FESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
FESVCGEV RLRLLGDY H TRI FVEF MAESAI ALNCSG +LGSLPIRVSPSKTPVR
Sbjct: 267 FESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIGALNCSGVLLGSLPIRVSPSKTPVR 326
Query: 356 PRA-PRPPLH 364
RA PR +H
Sbjct: 327 SRAIPRHQMH 336
>gi|110737686|dbj|BAF00782.1| RNA-binding - like protein [Arabidopsis thaliana]
Length = 353
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 223/370 (60%), Positives = 259/370 (70%), Gaps = 31/370 (8%)
Query: 1 MAVAENAGAKIDSSNQNLDDTVVSSDS----------NDVQNSNDHSKERSGNGNANIQI 50
MAVAENAG K+DSS QNLD+ ++ + +D +D S + +
Sbjct: 1 MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLTIDSTPETDD 60
Query: 51 QNGQTKPGAGAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSL 110
+ +T GF DN + E++DL D SKLNPMA EFVPPSL
Sbjct: 61 RINETAQKVQTLNGFSGNGERDN-----------NGEIKDLADAFSKLNPMAQEFVPPSL 109
Query: 111 ANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSN 170
A Q NG G+TNNF A+ N H R+R + QGKRRMN RTS
Sbjct: 110 ARSQSGVLR------NGLGFTNNFAAPPK-LADGNDHFP--RRRRSFGQGKRRMNKRTSL 160
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
AQ+D+VIRRTVYVSDIDQQVTEE LA +F+ CGQVVDCR+CGDPNSVLRFAF+EFT+EEG
Sbjct: 161 AQKDDVIRRTVYVSDIDQQVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEG 220
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
ARAALS++GT+LGFYP++VLPSKTAIAPVNPTFLPRSEDEREMC RT+YCTNIDK++TQ
Sbjct: 221 ARAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNIDKRITQI 280
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 350
D+K FFE CGEV RLR LGDY H TRIAFVEFAMAESAIAAL+CSG VLG+LPIRVSPS
Sbjct: 281 DLKGFFEMPCGEVHRLR-LGDYHHQTRIAFVEFAMAESAIAALHCSGIVLGALPIRVSPS 339
Query: 351 KTPVRPRAPR 360
KTPVRP PR
Sbjct: 340 KTPVRPHFPR 349
>gi|224118386|ref|XP_002317806.1| predicted protein [Populus trichocarpa]
gi|222858479|gb|EEE96026.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/282 (74%), Positives = 237/282 (84%), Gaps = 10/282 (3%)
Query: 72 DNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYT 131
D+ + + +S +M DLV+MLSKLNPMA EFVPPSLAN +P FFG
Sbjct: 9 DDQIHHQRAKSNGVNDMNDLVEMLSKLNPMAEEFVPPSLAN------HPGFFGNGFGFNA 62
Query: 132 NNFIMHTD-GTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQV 190
NNF++ + G AN T RRK+N Y+QG+RRMN RTS AQ+DE+I+RTVYVSDIDQQV
Sbjct: 63 NNFLVQINNGIANGQ---TNRRKKNSYNQGRRRMNNRTSMAQRDEIIKRTVYVSDIDQQV 119
Query: 191 TEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVL 250
TEEQLA LF+ CGQVVDCRICGDPNSVLRFAFVEFTDEEGAR ALSL+GT+LGFYP+RVL
Sbjct: 120 TEEQLAGLFIHCGQVVDCRICGDPNSVLRFAFVEFTDEEGARTALSLSGTVLGFYPLRVL 179
Query: 251 PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLG 310
PSKTAIAPVNPTFLPRSEDEREMC+RT+YCTNIDKK+TQ D++LFFES CGEV RLRLLG
Sbjct: 180 PSKTAIAPVNPTFLPRSEDEREMCARTVYCTNIDKKITQADVRLFFESFCGEVHRLRLLG 239
Query: 311 DYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKT 352
DY HSTRIAFVEFA+AESAIAALNCSGAVLGSLPIRVSPSKT
Sbjct: 240 DYHHSTRIAFVEFAVAESAIAALNCSGAVLGSLPIRVSPSKT 281
>gi|218200388|gb|EEC82815.1| hypothetical protein OsI_27601 [Oryza sativa Indica Group]
Length = 277
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/278 (73%), Positives = 221/278 (79%), Gaps = 24/278 (8%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNG 146
EMRDL D+LSKLNPMA EFVPPSLA P + Y + T G
Sbjct: 24 EMRDLEDLLSKLNPMAEEFVPPSLAAA----------SPTAYAY---YPTPTPSHVFPAG 70
Query: 147 HTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 206
H GKRRMN RTS AQ+DEVIRRTVYVSDID QVTEEQLA LF+ CGQVV
Sbjct: 71 HA-----------GKRRMNRRTSMAQRDEVIRRTVYVSDIDHQVTEEQLAALFINCGQVV 119
Query: 207 DCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 266
DCR+CGDPNSVLRFAF+EFTDEE ARAAL+L+GT+LG+YPVRVLPSKTAIAPVNPTFLPR
Sbjct: 120 DCRMCGDPNSVLRFAFIEFTDEESARAALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPR 179
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 326
S+DEREMC+RTIYCTNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF MA
Sbjct: 180 SDDEREMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMA 239
Query: 327 ESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
ESA AALNCSG +LGSLPIRVSPSKTPVRPRAPR +H
Sbjct: 240 ESATAALNCSGVILGSLPIRVSPSKTPVRPRAPRQLMH 277
>gi|50725622|dbj|BAD33089.1| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group]
gi|182375457|dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group]
gi|215736921|dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639804|gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza sativa Japonica Group]
Length = 302
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/289 (70%), Positives = 223/289 (77%), Gaps = 21/289 (7%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGY-----TNNFIMHTDGT 141
EMRDL D+LSKLNPMA EFVPPSLA P + Y ++ DG
Sbjct: 24 EMRDLEDLLSKLNPMAEEFVPPSLAAA----------SPTAYAYYPTPTPSHVFPAVDGL 73
Query: 142 A------NTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQL 195
A G GKRRMN RTS AQ+DEVIRRTVYVSDID QVTEEQL
Sbjct: 74 AGPRPRKKGGGGGGGGGFGGQGHAGKRRMNSRTSMAQRDEVIRRTVYVSDIDHQVTEEQL 133
Query: 196 ATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTA 255
A LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEE ARAAL+L+GT+LG+YPVRVLPSKTA
Sbjct: 134 AALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEESARAALNLSGTVLGYYPVRVLPSKTA 193
Query: 256 IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 315
IAPVNPTFLPRS+DEREMC+RTIYCTNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HS
Sbjct: 194 IAPVNPTFLPRSDDEREMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHS 253
Query: 316 TRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
TRIAFVEF MAESA AALNCSG +LGSLPIRVSPSKTPVRPRAPR +H
Sbjct: 254 TRIAFVEFVMAESATAALNCSGVILGSLPIRVSPSKTPVRPRAPRQLMH 302
>gi|224028543|gb|ACN33347.1| unknown [Zea mays]
gi|413941691|gb|AFW74340.1| CID11 [Zea mays]
Length = 328
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/296 (68%), Positives = 227/296 (76%), Gaps = 20/296 (6%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYT---NNFIMHTDGTAN 143
EMRDL D+LSKLNPMA EFVPPSLA+ PA P +G+ F + + G
Sbjct: 35 EMRDLEDLLSKLNPMAEEFVPPSLASPA--ALTPAPLSPAAYGFYPAGAGFAVASPGHGG 92
Query: 144 TNGHTTTRRKR--------------NGYSQ-GKRRMNCRTSNAQQDEVIRRTVYVSDIDQ 188
G +G+ +RR N RTS AQ+DE+IRRTVYVSDID
Sbjct: 93 VVGFPAVADAHAARGRKKGGAGGGFSGHGHPARRRTNSRTSMAQRDEIIRRTVYVSDIDH 152
Query: 189 QVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVR 248
QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+LG+YPVR
Sbjct: 153 QVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPVR 212
Query: 249 VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 308
VLPSKTAIAPVNPTFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CGEV RLRL
Sbjct: 213 VLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRL 272
Query: 309 LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
LGDY HSTRIAFVEF MAESA AALNCSG +LGSLPIRVSPSKTPVRPRAPR +H
Sbjct: 273 LGDYHHSTRIAFVEFVMAESATAALNCSGVILGSLPIRVSPSKTPVRPRAPRQLMH 328
>gi|357139501|ref|XP_003571320.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Brachypodium distachyon]
Length = 328
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/301 (68%), Positives = 230/301 (76%), Gaps = 25/301 (8%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANG-----------QIFNFNPAFFGPNGFGYTNNFI 135
EMRDL ++LSKLNPMA EFVPPSLA + NP+ G G G+ +
Sbjct: 30 EMRDLEELLSKLNPMAEEFVPPSLATAPHPTAAGYAAAAGYYPNPSAGGGRG-GFVASPA 88
Query: 136 MHTDGTANTNGHTTTRRKRNGYSQ------------GKRRMNCRTSNAQQDEVIRRTVYV 183
H G R R + GKRR+N RTS AQ+DEVIRRTVYV
Sbjct: 89 AHR-GVVGFPAAPADGRGRKKFGGYAGAGPGGYPQGGKRRVNSRTSQAQRDEVIRRTVYV 147
Query: 184 SDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLG 243
SDID QVTEEQLA LF+ GQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+LG
Sbjct: 148 SDIDHQVTEEQLAALFINVGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALTLSGTVLG 207
Query: 244 FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 303
+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIYCTNID+KV+Q D+KLFFES+CGEV
Sbjct: 208 YYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDRKVSQADVKLFFESICGEV 267
Query: 304 QRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPL 363
RLRLLGDYQH+TRIAFVEF MAESA AALNCSG +LGSLPIRVSPSKTPVRPRAPRP +
Sbjct: 268 YRLRLLGDYQHNTRIAFVEFVMAESATAALNCSGVILGSLPIRVSPSKTPVRPRAPRPLM 327
Query: 364 H 364
H
Sbjct: 328 H 328
>gi|226529745|ref|NP_001150079.1| CID11 [Zea mays]
gi|195636508|gb|ACG37722.1| CID11 [Zea mays]
Length = 328
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 203/296 (68%), Positives = 225/296 (76%), Gaps = 20/296 (6%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYT---NNFIMHTDGTAN 143
EMRDL D+LSKLNPMA EFVPPSLA+ PA P +G+ F + + G
Sbjct: 35 EMRDLEDLLSKLNPMAEEFVPPSLASPA--ALTPAPLSPAAYGFYPAGAGFAVASPGHGG 92
Query: 144 TNGHTTT---------------RRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQ 188
G G+RR N RTS AQ+DE+IRRTVYVSDID
Sbjct: 93 VVGFPAVADAHAARGRKKGGAGGGFSGHGHPGRRRTNSRTSMAQRDEIIRRTVYVSDIDH 152
Query: 189 QVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVR 248
QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+LG+YPVR
Sbjct: 153 QVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPVR 212
Query: 249 VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 308
VLPSKTAIAPVNPTFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CGEV RLRL
Sbjct: 213 VLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRL 272
Query: 309 LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
LGDY HSTRIAFVEF MAESA AALNCSG +LGSLPIRVSPSKTPVRPRAPR +H
Sbjct: 273 LGDYHHSTRIAFVEFVMAESATAALNCSGVILGSLPIRVSPSKTPVRPRAPRQLMH 328
>gi|302769672|ref|XP_002968255.1| hypothetical protein SELMODRAFT_66365 [Selaginella moellendorffii]
gi|300163899|gb|EFJ30509.1| hypothetical protein SELMODRAFT_66365 [Selaginella moellendorffii]
Length = 260
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/271 (72%), Positives = 220/271 (81%), Gaps = 11/271 (4%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGH 147
MR+L D+L KLNP+A EFVPPS + PA + I H
Sbjct: 1 MRELEDLLKKLNPLAKEFVPPSRGD-------PAL----SKELLSKQINHQQQQLQQQQP 49
Query: 148 TTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 207
+RK+NGY+ GK+R N R S AQ++E IRRTVYVSDIDQQVTEEQLA LF+ CGQV+D
Sbjct: 50 LQQQRKQNGYNTGKKRYNNRQSKAQREECIRRTVYVSDIDQQVTEEQLAALFINCGQVID 109
Query: 208 CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
CR+CGDPNSVLRFAFVEFTDEEGAR AL+LAGTMLGFYPVRVLPSKTAI PVNPTFLPRS
Sbjct: 110 CRVCGDPNSVLRFAFVEFTDEEGARQALNLAGTMLGFYPVRVLPSKTAIVPVNPTFLPRS 169
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAE 327
EDER+MC+RTIYCTNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEFA+AE
Sbjct: 170 EDERQMCARTIYCTNIDKKVSQSDVKLFFESLCGEVSRLRLLGDYHHSTRIAFVEFALAE 229
Query: 328 SAIAALNCSGAVLGSLPIRVSPSKTPVRPRA 358
SA+AALNCSGA+LGSLPIRVSPSKTPVRPR+
Sbjct: 230 SAMAALNCSGAILGSLPIRVSPSKTPVRPRS 260
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 266 RSEDEREMC-SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
+S+ +RE C RT+Y ++ID++VT+ + F + CG+V R+ GD R AFVEF
Sbjct: 70 QSKAQREECIRRTVYVSDIDQQVTEEQLAALFIN-CGQVIDCRVCGDPNSVLRFAFVEFT 128
Query: 325 MAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAP 359
E A ALN +G +LG P+RV PSKT + P P
Sbjct: 129 DEEGARQALNLAGTMLGFYPVRVLPSKTAIVPVNP 163
>gi|302788706|ref|XP_002976122.1| hypothetical protein SELMODRAFT_56081 [Selaginella moellendorffii]
gi|300156398|gb|EFJ23027.1| hypothetical protein SELMODRAFT_56081 [Selaginella moellendorffii]
Length = 267
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/276 (71%), Positives = 225/276 (81%), Gaps = 12/276 (4%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPS---LANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANT 144
MR+L D+L KLNP+A EFVPPS + ++ AFF F + G+
Sbjct: 1 MRELEDLLKKLNPLAKEFVPPSPTTQGDLEVLLETKAFFVLATFSFFA-------GSDRK 53
Query: 145 NGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQ 204
G ++NGY+ GK+R N R S AQ++E IRRTVYVSDIDQQVTEEQLA LF+ CGQ
Sbjct: 54 LGLFLV--QQNGYNTGKKRYNNRQSKAQREECIRRTVYVSDIDQQVTEEQLAALFINCGQ 111
Query: 205 VVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
V+DCR+CGDPNSVLRFAFVEFTDEEGAR AL+LAGTMLGFYPVRVLPSKTAI PVNPTFL
Sbjct: 112 VIDCRVCGDPNSVLRFAFVEFTDEEGARQALNLAGTMLGFYPVRVLPSKTAIVPVNPTFL 171
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
PRSEDER+MC+RTIYCTNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEFA
Sbjct: 172 PRSEDERQMCARTIYCTNIDKKVSQSDVKLFFESLCGEVSRLRLLGDYHHSTRIAFVEFA 231
Query: 325 MAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
+AESA+AALNCSGA+LGSLPIRVSPSKTPVRPR+PR
Sbjct: 232 LAESAMAALNCSGAILGSLPIRVSPSKTPVRPRSPR 267
>gi|116781618|gb|ABK22180.1| unknown [Picea sitchensis]
Length = 288
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/278 (68%), Positives = 225/278 (80%), Gaps = 23/278 (8%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNG 146
+MR+LVD+LSKLNP+A EF+P + +FI++ +G+ N
Sbjct: 34 DMRELVDLLSKLNPLAEEFIPQP-------------------HRSPSFIINGNGSFANN- 73
Query: 147 HTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 206
+RRK+N ++QGKRR+N R AQQ++ +RRTVYV DID QVTEEQLA LF+ CGQV+
Sbjct: 74 ---SRRKKNNFNQGKRRLNGRNIRAQQEDSVRRTVYVCDIDHQVTEEQLAALFINCGQVI 130
Query: 207 DCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 266
DCRICGDPNSVLRFAF+EF DE+GARAALSLAGTMLG+YPVRVLPSKTAI PVNPTFLPR
Sbjct: 131 DCRICGDPNSVLRFAFIEFADEQGARAALSLAGTMLGYYPVRVLPSKTAILPVNPTFLPR 190
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 326
SEDEREMC+RTIYCTNIDKKV+Q ++++FFES+CGEV RLRLLGD+ HSTRIAFVEF MA
Sbjct: 191 SEDEREMCARTIYCTNIDKKVSQVEVRMFFESLCGEVSRLRLLGDHVHSTRIAFVEFVMA 250
Query: 327 ESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
ESAI ALNCSGA++GSLPIRVSPSKTPVRPR P P +H
Sbjct: 251 ESAILALNCSGAIVGSLPIRVSPSKTPVRPRIPHPTMH 288
>gi|79325059|ref|NP_001031614.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
gi|332657508|gb|AEE82908.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
Length = 326
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/351 (62%), Positives = 250/351 (71%), Gaps = 39/351 (11%)
Query: 1 MAVAENAGAKIDSSNQNL----DDTVVSSDSNDVQNSNDHSKERSGNGNANIQIQNGQTK 56
MAV E+ GA L + V+S + ++NDH GNG I + G
Sbjct: 1 MAVIESVGANTTVEAGGLISPSPPSSVTSQESGASSNNDHG----GNG---IHDEIG--- 50
Query: 57 PGAGAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIF 116
V+V SD GESFK +MR+L ++LSKLNPMA EF+PPSL +
Sbjct: 51 ---------VHVARSDG------GESFKR-DMRELHELLSKLNPMAKEFIPPSLTKPVVN 94
Query: 117 NFNPAFFGPN-GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDE 175
FN FF N GF NF ++ DG+ RRK++ QGKRRMN RTS AQ++E
Sbjct: 95 GFNGGFFAVNNGFVAAGNFPVNEDGSF--------RRKKSFGQQGKRRMNPRTSLAQREE 146
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
+IRRTVYVSDIDQQVTEEQLA LF+ GQVVDCRICGDPNSVLRFAF+EFTDE GAR AL
Sbjct: 147 IIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARTAL 206
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
+L+GTMLGFYPV+V+PSKTAIAPVNPTFLPR+EDEREMC+RTIYCTNIDKK+TQ DIKLF
Sbjct: 207 NLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQTDIKLF 266
Query: 296 FESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIR 346
FESVCGEV RLRLLGDY H TRI FVEF MAESAIAALNCSG +LGSLPIR
Sbjct: 267 FESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNCSGVLLGSLPIR 317
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 331
E+ RT+Y ++ID++VT+ + F G+V R+ GD R AF+EF A
Sbjct: 146 EIIRRTVYVSDIDQQVTEEQLAGLFIGF-GQVVDCRICGDPNSVLRFAFIEFTDEVGART 204
Query: 332 ALNCSGAVLGSLPIRVSPSKTPVRPRAP 359
ALN SG +LG P++V PSKT + P P
Sbjct: 205 ALNLSGTMLGFYPVKVMPSKTAIAPVNP 232
>gi|326514404|dbj|BAJ96189.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 324
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/285 (70%), Positives = 220/285 (77%), Gaps = 10/285 (3%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLA---------NGQIFNFNPAF-FGPNGFGYTNNFIM 136
EMRDL ++LSKLNPMA EFVPPSLA G N PA F P +
Sbjct: 37 EMRDLEELLSKLNPMAEEFVPPSLAAHPMPPPPYAGYYPNGPPAAGFAPVASPGHRGVVG 96
Query: 137 HTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLA 196
GKRR+N RTS AQ+DEVIRRTVYVSDID QVTEEQLA
Sbjct: 97 FPAADGRGRKKFGGGYGGGYPHGGKRRVNSRTSQAQRDEVIRRTVYVSDIDHQVTEEQLA 156
Query: 197 TLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
LF+ GQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+LG+YPVRVLPSKTAI
Sbjct: 157 ALFINVGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALTLSGTVLGYYPVRVLPSKTAI 216
Query: 257 APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHST 316
APVNPTFLPRS+DEREMC+RTIYCTNIDKKV+Q D+KLFFES+CGEV RLRLLGDYQH+T
Sbjct: 217 APVNPTFLPRSDDEREMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYQHNT 276
Query: 317 RIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRP 361
RIAFVEF MAESA AALNCSG +LGSLPIRVSP KTPVRPRAPRP
Sbjct: 277 RIAFVEFVMAESATAALNCSGVILGSLPIRVSPFKTPVRPRAPRP 321
>gi|168022364|ref|XP_001763710.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685203|gb|EDQ71600.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/213 (86%), Positives = 201/213 (94%), Gaps = 1/213 (0%)
Query: 153 KRNGYSQGK-RRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 211
K+NGY+QG RR+N RTS AQ+++ IRRTVYVSDIDQQVTEEQLA LF+TCGQVVDCR+C
Sbjct: 1 KKNGYNQGNNRRVNSRTSRAQREDSIRRTVYVSDIDQQVTEEQLAALFITCGQVVDCRVC 60
Query: 212 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
GDPNSVLRFAFVEFTDEEGARAALSLAGTMLG+YPVRVLPSKTAI PVNPTFLPRSEDER
Sbjct: 61 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIVPVNPTFLPRSEDER 120
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 331
EMC+RTIYCTNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF MAESA+A
Sbjct: 121 EMCARTIYCTNIDKKVSQADVKLFFESLCGEVARLRLLGDYHHSTRIAFVEFVMAESAMA 180
Query: 332 ALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
ALNCSGA+LGSLPIRVSPSKTPVRPR+PR PLH
Sbjct: 181 ALNCSGAILGSLPIRVSPSKTPVRPRSPRSPLH 213
>gi|242080315|ref|XP_002444926.1| hypothetical protein SORBIDRAFT_07g001560 [Sorghum bicolor]
gi|241941276|gb|EES14421.1| hypothetical protein SORBIDRAFT_07g001560 [Sorghum bicolor]
Length = 348
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 203/309 (65%), Positives = 222/309 (71%), Gaps = 31/309 (10%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFN---------FNPAFFGPNGFGY--TNNFI 135
EMRDL D+LSKLNPMA EFVPPSL + PA P +G+ N
Sbjct: 40 EMRDLEDLLSKLNPMAEEFVPPSLTSPVAVAVGAGPGPGPLTPAPLSPAAYGFYPAANAG 99
Query: 136 MHTDGTANTNG--------------------HTTTRRKRNGYSQGKRRMNCRTSNAQQDE 175
A G G+RR N RTS AQ+DE
Sbjct: 100 FAVASPAAHRGVVGFPAAVADAAHAGRGRKKGGAGGGFGGHGHPGRRRTNSRTSMAQRDE 159
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
VIRRTVYVSDID QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL
Sbjct: 160 VIRRTVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAAL 219
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
+L+GT+LG+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLF
Sbjct: 220 NLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLF 279
Query: 296 FESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
FES+CGEV RLRLLGDY HSTRIAFVEF MAESA AALNCSG +LGSLPIRVSPSKTPVR
Sbjct: 280 FESICGEVFRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVILGSLPIRVSPSKTPVR 339
Query: 356 PRAPRPPLH 364
PRAPR +H
Sbjct: 340 PRAPRQLMH 348
>gi|297851722|ref|XP_002893742.1| hypothetical protein ARALYDRAFT_473465 [Arabidopsis lyrata subsp.
lyrata]
gi|297339584|gb|EFH70001.1| hypothetical protein ARALYDRAFT_473465 [Arabidopsis lyrata subsp.
lyrata]
Length = 409
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/271 (73%), Positives = 222/271 (81%), Gaps = 6/271 (2%)
Query: 80 GESFKDCEMRDLVDMLSKLNPMAAEFVPPSLAN----GQIFNFNPAFFGPNGFGYTNNFI 135
GESFK +MR+L ++ SKLNPMA EFVPPSL G + N FF G + NN
Sbjct: 79 GESFKR-DMRELQELFSKLNPMAEEFVPPSLTKQGGNGGLNGVNGGFFTSAGSFFRNNGF 137
Query: 136 MHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQL 195
T N + RRK++ + QGKRRMN RTS AQ+++VIRRTVYVSD+DQQVTEEQL
Sbjct: 138 SGTGNGGYGNENGGFRRKKS-FGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQL 196
Query: 196 ATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTA 255
A LF++CGQVVDCRICGDPNSVLRFAF+EFTDEEGA AL+L+GTMLGFYPV+VLPSKTA
Sbjct: 197 AGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTA 256
Query: 256 IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 315
IAPVNPTFLPR+EDEREMC+RTIYCTNIDKKVTQ D+K+FFES CGEV RLRLLGDYQHS
Sbjct: 257 IAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHS 316
Query: 316 TRIAFVEFAMAESAIAALNCSGAVLGSLPIR 346
TRIAFVEF MAESAIAALNCSG VLGSLPIR
Sbjct: 317 TRIAFVEFVMAESAIAALNCSGVVLGSLPIR 347
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y +++D++VT+ + F S CG+V R+ GD R AF+EF E A+ ALN
Sbjct: 180 RTVYVSDLDQQVTEEQLAGLFVS-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNL 238
Query: 336 SGAVLGSLPIRVSPSKTPVRPRAP 359
SG +LG P++V PSKT + P P
Sbjct: 239 SGTMLGFYPVKVLPSKTAIAPVNP 262
>gi|79319100|ref|NP_001031131.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
gi|332193409|gb|AEE31530.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
Length = 406
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/269 (73%), Positives = 221/269 (82%), Gaps = 2/269 (0%)
Query: 80 GESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTD 139
GESFK +MR+L ++ SKLNPMA EFVPPSL N FF G + NN T
Sbjct: 76 GESFKR-DMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGFAGTG 134
Query: 140 GTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF 199
N + RRK++ + QGKRRMN RTS AQ+++VIRRTVYVSD+DQQVTEEQLA LF
Sbjct: 135 NGGYGNENGGFRRKKS-FGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLF 193
Query: 200 LTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPV 259
++CGQVVDCRICGDPNSVLRFAF+EFTDEEGA AL+L+GTMLGFYPV+VLPSKTAIAPV
Sbjct: 194 VSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPV 253
Query: 260 NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIA 319
NPTFLPR+EDEREMC+RTIYCTNIDKKVTQ D+K+FFES CGEV RLRLLGDYQHSTRIA
Sbjct: 254 NPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIA 313
Query: 320 FVEFAMAESAIAALNCSGAVLGSLPIRVS 348
FVEF MAESAIAALNCSG VLGSLPIR S
Sbjct: 314 FVEFVMAESAIAALNCSGVVLGSLPIRSS 342
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y +++D++VT+ + F S CG+V R+ GD R AF+EF E A+ ALN
Sbjct: 173 RTVYVSDLDQQVTEEQLAGLFVS-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNL 231
Query: 336 SGAVLGSLPIRVSPSKTPVRPRAP 359
SG +LG P++V PSKT + P P
Sbjct: 232 SGTMLGFYPVKVLPSKTAIAPVNP 255
>gi|308081540|ref|NP_001182915.1| uncharacterized protein LOC100501201 [Zea mays]
gi|238008164|gb|ACR35117.1| unknown [Zea mays]
gi|413921443|gb|AFW61375.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 342
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/299 (66%), Positives = 222/299 (74%), Gaps = 25/299 (8%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLAN------GQIFNFNPAFFGPNGFGY---TNNFIMH 137
EMRDL D+LSKLNPMA EFVPPSLA+ PA P +G+ F +
Sbjct: 39 EMRDLEDLLSKLNPMAEEFVPPSLASPISGAGAGHGALTPAPLSPAAYGFYPVNAGFAVA 98
Query: 138 TDG-------TANTNGHTTTRRKRNGYSQGKRRM---------NCRTSNAQQDEVIRRTV 181
+ G A + H K++G N RTS AQ+DE IRRTV
Sbjct: 99 SPGHRGVVSFPAVADAHAGRGMKKDGAGGFGGHGHGHPGRRRTNSRTSMAQRDEAIRRTV 158
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
YVSDID QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+
Sbjct: 159 YVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTV 218
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCG 301
LG+YPV+VLPSKTAIAPVN TFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CG
Sbjct: 219 LGYYPVKVLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICG 278
Query: 302 EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
EV RLRLLGDY HSTRIAFVEF MAESA AALNCSG VLGSLPIRVSPSKTPVRPR PR
Sbjct: 279 EVFRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVVLGSLPIRVSPSKTPVRPRVPR 337
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++VT+ L F + CG+V R+ GD + R AFVEF E A
Sbjct: 247 EREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESA 306
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
AAL+ +G +LG P+RV PSKT + P P L
Sbjct: 307 TAALNCSGVVLGSLPIRVSPSKTPVRPRVPRHL 339
>gi|224056565|ref|XP_002298913.1| predicted protein [Populus trichocarpa]
gi|222846171|gb|EEE83718.1| predicted protein [Populus trichocarpa]
Length = 307
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/277 (67%), Positives = 218/277 (78%), Gaps = 14/277 (5%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGH 147
++ LVDM +KLNP+A EF P S + PN + NNF + +AN N
Sbjct: 45 VQKLVDMFTKLNPLAKEFFPSSYSKN----------NPNELHF-NNFAVPVKQSANDN-- 91
Query: 148 TTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 207
+RKRN ++QG+R++N R AQQ++ IRRTVYVSDIDQ VTEE+LA LF CGQVVD
Sbjct: 92 -FPKRKRNNFNQGRRKLNGRAYRAQQEDSIRRTVYVSDIDQHVTEERLAGLFSGCGQVVD 150
Query: 208 CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
CR+CGDP+SVLRFAFVEF DE+GARAAL+L GTMLG+YPVRVLPSKTAI PVNPTFLPRS
Sbjct: 151 CRVCGDPHSVLRFAFVEFADEQGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRS 210
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAE 327
EDEREMC+RT+YCTNIDKKV+Q ++K FFES+CGEV RLRLLGD HSTRIAFVEFAMAE
Sbjct: 211 EDEREMCTRTVYCTNIDKKVSQVEVKNFFESICGEVTRLRLLGDQVHSTRIAFVEFAMAE 270
Query: 328 SAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
SAI ALNCSG LGS P+RVSPSKTPVRPR RP +H
Sbjct: 271 SAIVALNCSGMALGSQPVRVSPSKTPVRPRVTRPAMH 307
>gi|358248658|ref|NP_001240174.1| uncharacterized protein LOC100779109 [Glycine max]
gi|255639113|gb|ACU19856.1| unknown [Glycine max]
Length = 296
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/302 (63%), Positives = 231/302 (76%), Gaps = 7/302 (2%)
Query: 63 GGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAF 122
+ A N M+ K ++ + ++ LVDM +KLNP+A EF P S + N + F
Sbjct: 2 AAVAEIPADANKMDSK-PKAESEFSVQKLVDMFTKLNPLAKEFFPSSYSP----NHDHGF 56
Query: 123 FGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVY 182
G N T F++ T +AN N +RR+RN ++QG+RR++ R+ AQ+++ IRRTVY
Sbjct: 57 QGFNQLSPTQ-FLVSTKPSANEN-FLNSRRRRNSFNQGRRRVSGRSLKAQREDSIRRTVY 114
Query: 183 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTML 242
VS+IDQ VTEE+LA LF +CGQV+DCRICGDP+SVLRFAFVEF DE GAR AL+L GT+L
Sbjct: 115 VSEIDQHVTEERLAALFSSCGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNLGGTVL 174
Query: 243 GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGE 302
G+YPVRVLPSKTAI PVNPTFLPRS+DEREMC+RTIYCTNIDKKV+Q ++K FFES CGE
Sbjct: 175 GYYPVRVLPSKTAILPVNPTFLPRSDDEREMCARTIYCTNIDKKVSQAEVKNFFESACGE 234
Query: 303 VQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 362
V RLRLLGD HSTRIAFVEFAMAESAI ALNCSG +LG+ PIRVSPSKTPVRPR PRP
Sbjct: 235 VMRLRLLGDQVHSTRIAFVEFAMAESAIIALNCSGMLLGTQPIRVSPSKTPVRPRVPRPA 294
Query: 363 LH 364
H
Sbjct: 295 SH 296
>gi|224114547|ref|XP_002316790.1| predicted protein [Populus trichocarpa]
gi|222859855|gb|EEE97402.1| predicted protein [Populus trichocarpa]
Length = 308
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/277 (68%), Positives = 219/277 (79%), Gaps = 14/277 (5%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGH 147
++ LVDM +KLNP+A EF P S +N N P F + NNF + +AN N
Sbjct: 46 VQKLVDMFTKLNPLAKEFFPSS------YNKN----NPKQF-HINNFPVPNKQSANDN-- 92
Query: 148 TTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 207
+R+RN ++QG+RR+N R AQ+++ IRRTVYVSDIDQ VTEEQLA LF CGQVVD
Sbjct: 93 -FPKRRRNDFNQGRRRLNGRAYRAQREDSIRRTVYVSDIDQHVTEEQLAGLFSGCGQVVD 151
Query: 208 CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
CRICGDP SVLRFAFVEF E+GARAAL+L GTMLG+YPVRVLPSKTAI PVNPTFLP+S
Sbjct: 152 CRICGDPRSVLRFAFVEFAVEQGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPQS 211
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAE 327
EDEREMC+RT+YCTNI+KKV+Q ++K FFES+CGEV RLRLLGD+ HSTRIAFVEFAMAE
Sbjct: 212 EDEREMCTRTVYCTNIEKKVSQAEVKNFFESICGEVTRLRLLGDHVHSTRIAFVEFAMAE 271
Query: 328 SAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
SAI ALNCSG VLGS P+RVSPSKTPVRPR R LH
Sbjct: 272 SAIVALNCSGMVLGSQPVRVSPSKTPVRPRVTRLALH 308
>gi|147803358|emb|CAN68836.1| hypothetical protein VITISV_026310 [Vitis vinifera]
Length = 195
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/194 (90%), Positives = 186/194 (95%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
AQ++EVI+RTVYVSDIDQQVTEE LA LF+ CGQVVDCRICGDPNSVLRFAFVEFTDEEG
Sbjct: 2 AQREEVIKRTVYVSDIDQQVTEEDLAALFINCGQVVDCRICGDPNSVLRFAFVEFTDEEG 61
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
ARAALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLPRSEDEREMC+RTIYCTNIDKKVTQ
Sbjct: 62 ARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVTQA 121
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 350
++KLFFES+CGEV RLRLLGDY HSTRIAFVEF MAESAIAALNCSGA+LGSLPIRVSPS
Sbjct: 122 EVKLFFESICGEVHRLRLLGDYHHSTRIAFVEFVMAESAIAALNCSGAILGSLPIRVSPS 181
Query: 351 KTPVRPRAPRPPLH 364
KTPVRPRAPRP LH
Sbjct: 182 KTPVRPRAPRPALH 195
>gi|115474513|ref|NP_001060853.1| Os08g0116400 [Oryza sativa Japonica Group]
gi|113622822|dbj|BAF22767.1| Os08g0116400, partial [Oryza sativa Japonica Group]
Length = 283
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/204 (85%), Positives = 190/204 (93%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 220
KRRMN RTS AQ+DEVIRRTVYVSDID QVTEEQLA LF+ CGQVVDCR+CGDPNSVLRF
Sbjct: 80 KRRMNSRTSMAQRDEVIRRTVYVSDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLRF 139
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYC 280
AF+EFTDEE ARAAL+L+GT+LG+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIYC
Sbjct: 140 AFIEFTDEESARAALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYC 199
Query: 281 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 340
TNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF MAESA AALNCSG +L
Sbjct: 200 TNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVIL 259
Query: 341 GSLPIRVSPSKTPVRPRAPRPPLH 364
GSLPIRVSPSKTPVRPRAPR +H
Sbjct: 260 GSLPIRVSPSKTPVRPRAPRQLMH 283
>gi|147804944|emb|CAN62612.1| hypothetical protein VITISV_033249 [Vitis vinifera]
Length = 369
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/296 (66%), Positives = 220/296 (74%), Gaps = 32/296 (10%)
Query: 33 SNDHSKERSGNGNANIQIQNGQTKPGAG---AGGGFVNVNASDNHMERKMGESFKDCEMR 89
S H+ +RS I +QN Q P A + GG + N G+S D MR
Sbjct: 93 SVQHNLDRS----QKIGVQNMQVGPVAAQHRSNGGXLQRN----------GDSGVD--MR 136
Query: 90 DLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTT 149
+L ++ SKLNPMA EFVPPSLAN G NG Y+N H + NG
Sbjct: 137 ELQELFSKLNPMAEEFVPPSLANN----------GLNGGFYSNGSETHNN---TRNGQVN 183
Query: 150 TRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR 209
RRK+N + QGKRRMN RTS AQ++E+IRRTVYVSDIDQQVTEE+LA LF+TCGQVVDCR
Sbjct: 184 GRRKKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQVTEEKLAALFITCGQVVDCR 243
Query: 210 ICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSED 269
+CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLPR+ED
Sbjct: 244 VCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRNED 303
Query: 270 EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
EREMC+RTIYCTNIDKKV+Q D+KLFFESVCGEV RLRLLGDY HSTRIAFVEF M
Sbjct: 304 EREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFIM 359
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 331
E+ RT+Y ++ID++VT+ + F + CG+V R+ GD R AFVEF E A A
Sbjct: 209 EIIRRTVYVSDIDQQVTEEKLAALFIT-CGQVVDCRVCGDPNSVLRFAFVEFTDEEGARA 267
Query: 332 ALNCSGAVLGSLPIRVSPSKTPVRPRAP 359
AL+ +G +LG P+RV PSKT + P P
Sbjct: 268 ALSLAGTMLGYYPVRVLPSKTAIAPVNP 295
>gi|15231858|ref|NP_188063.1| CTC-interacting domain 9 protein [Arabidopsis thaliana]
gi|11994215|dbj|BAB01337.1| unnamed protein product [Arabidopsis thaliana]
gi|332642006|gb|AEE75527.1| CTC-interacting domain 9 protein [Arabidopsis thaliana]
Length = 327
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/284 (66%), Positives = 210/284 (73%), Gaps = 16/284 (5%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSL---ANGQIFNFNPAFFGPNGFGYTNN-----FIMHT 138
+M LV M KLNP+A EF P N Q+ N F + F T F +
Sbjct: 49 DMHKLVAMFKKLNPLAKEFFPSYYDPKKNNQVAKAN-QFLPADDFETTKKQSGEEFDLDA 107
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATL 198
NT RKR YSQG+RR+ R S AQ+++ IRRTVYVSDIDQ VTEE LA L
Sbjct: 108 KKDDNT-------RKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGL 160
Query: 199 FLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAP 258
F CGQVVDCRICGDP+SVLRFAFVEF D++GA ALSL GTMLGFYPVRVLPSKTAI P
Sbjct: 161 FSNCGQVVDCRICGDPHSVLRFAFVEFADDQGAHEALSLGGTMLGFYPVRVLPSKTAILP 220
Query: 259 VNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI 318
VNPTFLPRSEDEREMC+RTIYCTNIDKKV+Q D++ FFES CGEV RLRLLGD HSTRI
Sbjct: 221 VNPTFLPRSEDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRI 280
Query: 319 AFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 362
AFVEFA+A+SA++ALNCSG V+GS PIRVSPSKTPVRPR RPP
Sbjct: 281 AFVEFALADSALSALNCSGMVVGSQPIRVSPSKTPVRPRITRPP 324
>gi|50725623|dbj|BAD33090.1| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group]
Length = 201
Score = 369 bits (948), Expect = e-99, Method: Compositional matrix adjust.
Identities = 172/201 (85%), Positives = 187/201 (93%)
Query: 164 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFV 223
MN RTS AQ+DEVIRRTVYVSDID QVTEEQLA LF+ CGQVVDCR+CGDPNSVLRFAF+
Sbjct: 1 MNSRTSMAQRDEVIRRTVYVSDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLRFAFI 60
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 283
EFTDEE ARAAL+L+GT+LG+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIYCTNI
Sbjct: 61 EFTDEESARAALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNI 120
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSL 343
DKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF MAESA AALNCSG +LGSL
Sbjct: 121 DKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVILGSL 180
Query: 344 PIRVSPSKTPVRPRAPRPPLH 364
PIRVSPSKTPVRPRAPR +H
Sbjct: 181 PIRVSPSKTPVRPRAPRQLMH 201
>gi|14030687|gb|AAK53018.1|AF375434_1 At1g32790 [Arabidopsis thaliana]
gi|25090128|gb|AAN72236.1| At1g32790/F6N18_9 [Arabidopsis thaliana]
Length = 201
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 172/201 (85%), Positives = 188/201 (93%)
Query: 164 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFV 223
MN RTS AQ+++VIRRTVYVSD+DQQVTEEQLA LF++CGQVVDCRICGDPNSVLRFAF+
Sbjct: 1 MNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFI 60
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 283
EFTDEEGA AL+L+GTMLGFYPV+VLPSKTAIAPVNPTFLPR+EDE EMC+RTIYCTNI
Sbjct: 61 EFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTEDESEMCARTIYCTNI 120
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSL 343
DKKVTQ D+K+FFE CGEV RLRLLGDYQHSTRIAFVEF MAESAIAALNCSG VLGSL
Sbjct: 121 DKKVTQSDVKIFFEYFCGEVYRLRLLGDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSL 180
Query: 344 PIRVSPSKTPVRPRAPRPPLH 364
PIRVSPSKTPVRPR+PR P+H
Sbjct: 181 PIRVSPSKTPVRPRSPRHPMH 201
>gi|255578158|ref|XP_002529948.1| RNA-binding protein, putative [Ricinus communis]
gi|223530546|gb|EEF32425.1| RNA-binding protein, putative [Ricinus communis]
Length = 281
Score = 366 bits (940), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 179/272 (65%), Positives = 210/272 (77%), Gaps = 11/272 (4%)
Query: 77 RKMGESFKDCE--MRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNF 134
+KM K+ E ++ LVDM +KLNP+A EF P S N I + F NNF
Sbjct: 18 KKMDSDVKNSEFSVQKLVDMFTKLNPLAKEFFPSSYNNNNI---------THNFLNLNNF 68
Query: 135 IMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQ 194
+ D + + ++ RRKRN Y+QGKRR+N R AQ+D+ IRRTVYVSDIDQ VTEE+
Sbjct: 69 AVVVDKQSPIDNFSSNRRKRNNYNQGKRRLNGRAYRAQRDDSIRRTVYVSDIDQHVTEER 128
Query: 195 LATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKT 254
LA LF +CGQVVDCR+CGDP+SVLRFAFVEF DE GARAAL+L GT+LG+YP RVLPSKT
Sbjct: 129 LAGLFSSCGQVVDCRVCGDPHSVLRFAFVEFADEHGARAALNLGGTVLGYYPFRVLPSKT 188
Query: 255 AIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQH 314
AI PVNPTFLPRSEDEREMCSRT+YCTNIDKK++Q ++K FFES CGEV RLRLLGD+ H
Sbjct: 189 AILPVNPTFLPRSEDEREMCSRTVYCTNIDKKISQAEVKTFFESTCGEVTRLRLLGDHVH 248
Query: 315 STRIAFVEFAMAESAIAALNCSGAVLGSLPIR 346
STRIAFVEFAMAESAI ALNCSG V+G+ PIR
Sbjct: 249 STRIAFVEFAMAESAIIALNCSGMVVGTQPIR 280
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y ++ID+ VT+ + F S CG+V R+ GD R AFVEFA A AALN
Sbjct: 113 RTVYVSDIDQHVTEERLAGLFSS-CGQVVDCRVCGDPHSVLRFAFVEFADEHGARAALNL 171
Query: 336 SGAVLGSLPIRVSPSKTPVRPRAP 359
G VLG P RV PSKT + P P
Sbjct: 172 GGTVLGYYPFRVLPSKTAILPVNP 195
>gi|356556922|ref|XP_003546769.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Glycine max]
Length = 296
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 187/302 (61%), Positives = 231/302 (76%), Gaps = 7/302 (2%)
Query: 63 GGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAF 122
+ A N M+ K ++ + ++ LVDM +KLNP+A EF P S + N + F
Sbjct: 2 AAVAEIPADANKMDSK-PKAESEFSVQKLVDMFTKLNPLAKEFFPSSYSP----NHDNRF 56
Query: 123 FGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVY 182
G N T+ F++ T +A+ N RR+RN ++QG+R+++ R+ AQ+++ IRRTVY
Sbjct: 57 QGFNQLSPTH-FLVSTKPSADEN-FPNNRRRRNSFNQGRRKVSGRSLKAQREDSIRRTVY 114
Query: 183 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTML 242
VS+IDQ VTEE+LA LF +CGQV+DCRICGDP+SVLRFAFVEF DE GAR AL+L GT+L
Sbjct: 115 VSEIDQHVTEERLAALFSSCGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNLGGTVL 174
Query: 243 GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGE 302
G+YPVRVLPSKTAI PVNPTFLPRS+DEREMC+RT+YCTNIDKKV+Q ++K FFES CGE
Sbjct: 175 GYYPVRVLPSKTAILPVNPTFLPRSDDEREMCARTVYCTNIDKKVSQAEVKNFFESACGE 234
Query: 303 VQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 362
V RLRLLGD+ HSTRIAFVEFAMAESAI ALNCSG +LG+ PIRVSPSKTPVRPR RP
Sbjct: 235 VMRLRLLGDHVHSTRIAFVEFAMAESAIIALNCSGMLLGTQPIRVSPSKTPVRPRVTRPA 294
Query: 363 LH 364
H
Sbjct: 295 SH 296
>gi|413921444|gb|AFW61376.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 482
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 186/284 (65%), Positives = 208/284 (73%), Gaps = 25/284 (8%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLAN------GQIFNFNPAFFGPNGFGY---TNNFIMH 137
EMRDL D+LSKLNPMA EFVPPSLA+ PA P +G+ F +
Sbjct: 39 EMRDLEDLLSKLNPMAEEFVPPSLASPISGAGAGHGALTPAPLSPAAYGFYPVNAGFAVA 98
Query: 138 TDG-------TANTNGHTTTRRKRNGYSQGKRRM---------NCRTSNAQQDEVIRRTV 181
+ G A + H K++G N RTS AQ+DE IRRTV
Sbjct: 99 SPGHRGVVSFPAVADAHAGRGMKKDGAGGFGGHGHGHPGRRRTNSRTSMAQRDEAIRRTV 158
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
YVSDID QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+
Sbjct: 159 YVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTV 218
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCG 301
LG+YPV+VLPSKTAIAPVN TFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CG
Sbjct: 219 LGYYPVKVLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICG 278
Query: 302 EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPI 345
EV RLRLLGDY HSTRIAFVEF MAESA AALNCSG VLGSLPI
Sbjct: 279 EVFRLRLLGDYHHSTRIAFVEFVMAESATAALNCSGVVLGSLPI 322
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 331
E RT+Y ++ID +VT+ ++ F + CG+V R+ GD R AF+EF E A A
Sbjct: 152 EAIRRTVYVSDIDHQVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEFTDEEGARA 210
Query: 332 ALNCSGAVLGSLPIRVSPSKTPVRP 356
ALN SG VLG P++V PSKT + P
Sbjct: 211 ALNLSGTVLGYYPVKVLPSKTAIAP 235
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++VT+ L F + CG+V R+ GD + R AFVEF E A
Sbjct: 247 EREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESA 306
Query: 232 RAALSLAGTMLGFYPVRVL 250
AAL+ +G +LG P+ ++
Sbjct: 307 TAALNCSGVVLGSLPISLM 325
>gi|79319864|ref|NP_001031182.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
gi|332194856|gb|AEE32977.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
Length = 308
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 179/277 (64%), Positives = 208/277 (75%), Gaps = 21/277 (7%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNG 146
+M+ LV M KLNP A EF P N +++F++ + N
Sbjct: 49 QMKKLVAMFKKLNPEAKEFFPSYKRNTN---------------QSDDFVIAIKPSGEDN- 92
Query: 147 HTTTRRKRNGYSQGKR-RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV 205
+++RN Y+QG+R R+ R S AQ+++ IRRTVYVSDIDQ VTEE LA LF +CGQV
Sbjct: 93 ----KKRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQV 148
Query: 206 VDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 265
VDCRICGDPNSVLRFAFVEF+D++GAR+ALSL GTM+G+YPVRVLPSKTAI PVNPTFLP
Sbjct: 149 VDCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLP 208
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
RSEDEREMCSRTIYCTN+DK T+ D+ FF+S CGEV RLRLLGD HSTRIAFVEFAM
Sbjct: 209 RSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAM 268
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 362
AESA+AALNCSG VLGS PIRVSPSKTPVR R R P
Sbjct: 269 AESAVAALNCSGIVLGSQPIRVSPSKTPVRSRITRSP 305
>gi|51969708|dbj|BAD43546.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|51970080|dbj|BAD43732.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 295
Score = 357 bits (917), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 179/277 (64%), Positives = 208/277 (75%), Gaps = 21/277 (7%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNG 146
+M+ LV M KLNP A EF P N +++F++ + N
Sbjct: 36 QMKKLVAMFKKLNPEAKEFFPSYKRNTN---------------QSDDFVIAIKPSGEDN- 79
Query: 147 HTTTRRKRNGYSQGKR-RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV 205
+++RN Y+QG+R R+ R S AQ+++ IRRTVYVSDIDQ VTEE LA LF +CGQV
Sbjct: 80 ----KKRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQV 135
Query: 206 VDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 265
VDCRICGDPNSVLRFAFVEF+D++GAR+ALSL GTM+G+YPVRVLPSKTAI PVNPTFLP
Sbjct: 136 VDCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLP 195
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
RSEDEREMCSRTIYCTN+DK T+ D+ FF+S CGEV RLRLLGD HSTRIAFVEFAM
Sbjct: 196 RSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAM 255
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 362
AESA+AALNCSG VLGS PIRVSPSKTPVR R R P
Sbjct: 256 AESAVAALNCSGIVLGSQPIRVSPSKTPVRSRITRSP 292
>gi|225462109|ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear
[Vitis vinifera]
gi|296088694|emb|CBI38144.3| unnamed protein product [Vitis vinifera]
Length = 292
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 185/278 (66%), Positives = 218/278 (78%), Gaps = 24/278 (8%)
Query: 91 LVDMLS--KLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANT--NG 146
+VDMLS KLNP+A EF P S Y+++ ++ TD + ++ +
Sbjct: 35 IVDMLSNLKLNPLAKEFFPSS--------------------YSHDHLIPTDFSKDSPNDA 74
Query: 147 HTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 206
+ RR+RN Y+QG+RR++ R AQ+++ IRRTVYVSDIDQ VTEE+LA LF +CGQVV
Sbjct: 75 YPNNRRRRNNYNQGRRRLSGRAFRAQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQVV 134
Query: 207 DCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 266
DCR+CGDP+SVLRFAFVEF DE GARAAL+L GTMLG+YPVRVLPSKTAI PVNPTFLPR
Sbjct: 135 DCRVCGDPHSVLRFAFVEFADEHGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPR 194
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 326
SEDEREMC+RT+YCTNIDKKV+Q ++K FFE CGEV RLRLLGD+ HSTRIAFVEFAMA
Sbjct: 195 SEDEREMCARTVYCTNIDKKVSQAEVKNFFERACGEVSRLRLLGDHVHSTRIAFVEFAMA 254
Query: 327 ESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
ESAI ALNCSG VLG+ PIRVSPSKTPVRPR PR LH
Sbjct: 255 ESAIVALNCSGLVLGTQPIRVSPSKTPVRPRVPRATLH 292
>gi|224061485|ref|XP_002300503.1| predicted protein [Populus trichocarpa]
gi|222847761|gb|EEE85308.1| predicted protein [Populus trichocarpa]
Length = 197
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 164/197 (83%), Positives = 182/197 (92%)
Query: 164 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFV 223
++ RTS AQ+++ +RRTVYVSDIDQQVTEEQLA LF+ CGQVVDCRICGDPNSVL FAF+
Sbjct: 1 ISSRTSMAQREDTVRRTVYVSDIDQQVTEEQLAALFINCGQVVDCRICGDPNSVLHFAFI 60
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 283
EFTDEEGARAALSL+GTMLG+YPV+VLPSKTAIAPVN TFLPR++DEREMC+RTIYCTNI
Sbjct: 61 EFTDEEGARAALSLSGTMLGYYPVKVLPSKTAIAPVNHTFLPRNDDEREMCARTIYCTNI 120
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSL 343
D+ TQ DIKLFFES+CGEV RLRLLGD+ H TRIAFVEF MAESAIAALNCSGAV+GSL
Sbjct: 121 DRNFTQSDIKLFFESLCGEVYRLRLLGDHHHPTRIAFVEFVMAESAIAALNCSGAVIGSL 180
Query: 344 PIRVSPSKTPVRPRAPR 360
PIRVSPSKTPVRPR PR
Sbjct: 181 PIRVSPSKTPVRPRGPR 197
>gi|115435208|ref|NP_001042362.1| Os01g0209400 [Oryza sativa Japonica Group]
gi|56201519|dbj|BAD73038.1| RNA-binding protein -like [Oryza sativa Japonica Group]
gi|56201749|dbj|BAD73106.1| RNA-binding protein -like [Oryza sativa Japonica Group]
gi|113531893|dbj|BAF04276.1| Os01g0209400 [Oryza sativa Japonica Group]
gi|215737283|dbj|BAG96212.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 308
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 182/285 (63%), Positives = 212/285 (74%), Gaps = 24/285 (8%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSL-----------ANGQIFNFNPAFFGPNGFGYTNNFIM 136
++ LVD+LSKLNP A EFVP S A+ +F++N + G NG G +
Sbjct: 32 VQKLVDLLSKLNPAAKEFVPSSAAVSSPSRKALSADAPVFDYN-SIGGWNGGGKESGADA 90
Query: 137 HTDGTANTNGHTTTRRKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQL 195
+ RR+RNGY SQG+RRMN R +A +++ IRRTVYVSDID VTEE+L
Sbjct: 91 YQQ-----------RRRRNGYLSQGRRRMNERARHADREDSIRRTVYVSDIDHTVTEERL 139
Query: 196 ATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTA 255
A +F CGQVVDCRICGDP+SVLRFAF+EF DEEGAR AL+L GTMLGFYPVRVLPSKTA
Sbjct: 140 ADIFANCGQVVDCRICGDPHSVLRFAFIEFADEEGARTALNLGGTMLGFYPVRVLPSKTA 199
Query: 256 IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 315
I PVNP FLPR+EDE+EM RT+YCTNIDKKVTQ D+K FFE +CGEV RLRLLGD HS
Sbjct: 200 ILPVNPKFLPRTEDEKEMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVHS 259
Query: 316 TRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
TRIAFVEF AE AI ALNCSG +LG+LP+RVSPSKTPV+PR R
Sbjct: 260 TRIAFVEFVHAECAIMALNCSGMILGTLPVRVSPSKTPVKPRLNR 304
>gi|218187722|gb|EEC70149.1| hypothetical protein OsI_00850 [Oryza sativa Indica Group]
Length = 317
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/285 (64%), Positives = 213/285 (74%), Gaps = 15/285 (5%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSL-----------ANGQIFNFNPAFFGPNGFGYTNNFIM 136
++ LVD+LSKLNP A EFVP S A+ +F++N + G NG G +
Sbjct: 32 VQKLVDLLSKLNPAAKEFVPSSAAVSSPSRKALSADAPVFDYN-SIGGWNGGGKESGADA 90
Query: 137 HTDGTANTNGHTTTRRKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQL 195
+ T+ RR NGY SQG+RRMN R +A +++ IRRTVYVSDID VTEE+L
Sbjct: 91 YQQRRDLTDDDQLLRR--NGYLSQGRRRMNERARHADREDSIRRTVYVSDIDHTVTEERL 148
Query: 196 ATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTA 255
A +F CGQVVDCRICGDP+SVLRFAF+EF DEEGARAAL+L GTMLGFYPVRVLPSKTA
Sbjct: 149 ADIFANCGQVVDCRICGDPHSVLRFAFIEFADEEGARAALNLGGTMLGFYPVRVLPSKTA 208
Query: 256 IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 315
I PVNP FLPR+EDE+EM RT+YCTNIDKKVTQ D+K FFE +CGEV RLRLLGD HS
Sbjct: 209 ILPVNPKFLPRTEDEKEMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVHS 268
Query: 316 TRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
TRIAFVEF AE AI ALNCSG +LG+LP+RVSPSKTPV+PR R
Sbjct: 269 TRIAFVEFVHAECAIMALNCSGMILGTLPVRVSPSKTPVKPRLNR 313
>gi|388509636|gb|AFK42884.1| unknown [Lotus japonicus]
Length = 313
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/281 (64%), Positives = 216/281 (76%), Gaps = 13/281 (4%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSLANG-------QIFNFNPAFFGPNGFGYTNNFIMHTDG 140
M+ LVD+ +KLNP+A EF+P S A Q FN + PN F NN +
Sbjct: 35 MQKLVDIFTKLNPLAEEFIPSSYAAAAHRDHLHQGFNQ----WSPNPFLVNNN--NNKPL 88
Query: 141 TANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFL 200
+ + RR+RN ++QG RR R AQ+++ +RRTVYVSDIDQ VTEE+LA LF
Sbjct: 89 ADDQYPNANNRRRRNNFNQGGRRFTGRVLKAQREDSVRRTVYVSDIDQHVTEERLAALFT 148
Query: 201 TCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVN 260
TCG V+DCRICGDP+SVLRFAFVEF DE GARAAL+L+GT+LG+YPVRVLPSKTAI PVN
Sbjct: 149 TCGSVIDCRICGDPHSVLRFAFVEFADEYGARAALNLSGTVLGYYPVRVLPSKTAILPVN 208
Query: 261 PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF 320
PTFLPRS+DEREMCSRT+YCTNIDKKV+Q ++K FFE CGEV R+RLLGD+ HSTRIAF
Sbjct: 209 PTFLPRSDDEREMCSRTVYCTNIDKKVSQAEVKNFFEISCGEVTRIRLLGDHVHSTRIAF 268
Query: 321 VEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRP 361
VEFA+AESAI AL+CSG +LG+ P+RVSPSKTPVRPR PRP
Sbjct: 269 VEFAIAESAIIALSCSGMLLGTQPVRVSPSKTPVRPRVPRP 309
>gi|224115532|ref|XP_002317057.1| predicted protein [Populus trichocarpa]
gi|222860122|gb|EEE97669.1| predicted protein [Populus trichocarpa]
Length = 195
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 161/190 (84%), Positives = 178/190 (93%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
AQQ+E++RRTVYVSDIDQQVTEEQLA LF+ CGQVVDCRICGDP SVLRFAF+EFTDEEG
Sbjct: 2 AQQEEIVRRTVYVSDIDQQVTEEQLAALFINCGQVVDCRICGDPKSVLRFAFIEFTDEEG 61
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
A+AALSL+GTMLG+YPV+VLPSKTAIAPVNPTFLPR++DEREMC+RTIYCTNID+ +TQ
Sbjct: 62 AQAALSLSGTMLGYYPVKVLPSKTAIAPVNPTFLPRNDDEREMCARTIYCTNIDRNLTQA 121
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 350
+IKLFFES+CGEV LRLLGD+ H TRIAFVEF MAESAIAALNCSG VLGSLPIRVSPS
Sbjct: 122 NIKLFFESLCGEVYHLRLLGDHHHPTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPS 181
Query: 351 KTPVRPRAPR 360
KTPVRPR PR
Sbjct: 182 KTPVRPRGPR 191
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDE 228
N + E+ RT+Y ++ID+ +T+ + F + CG+V R+ GD + R AFVEF
Sbjct: 98 NDDEREMCARTIYCTNIDRNLTQANIKLFFESLCGEVYHLRLLGDHHHPTRIAFVEFVMA 157
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
E A AAL+ +G +LG P+RV PSKT + P P
Sbjct: 158 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRGP 190
>gi|222617961|gb|EEE54093.1| hypothetical protein OsJ_00835 [Oryza sativa Japonica Group]
Length = 317
Score = 347 bits (890), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 182/285 (63%), Positives = 212/285 (74%), Gaps = 15/285 (5%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSL-----------ANGQIFNFNPAFFGPNGFGYTNNFIM 136
++ LVD+LSKLNP A EFVP S A+ +F++N + G NG G +
Sbjct: 32 VQKLVDLLSKLNPAAKEFVPSSAAVSSPSRKALSADAPVFDYN-SIGGWNGGGKESGADA 90
Query: 137 HTDGTANTNGHTTTRRKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQL 195
+ T+ RR NGY SQG+RRMN R +A +++ IRRTVYVSDID VTEE+L
Sbjct: 91 YQQRRDLTDDDQLLRR--NGYLSQGRRRMNERARHADREDSIRRTVYVSDIDHTVTEERL 148
Query: 196 ATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTA 255
A +F CGQVVDCRICGDP+SVLRFAF+EF DEEGAR AL+L GTMLGFYPVRVLPSKTA
Sbjct: 149 ADIFANCGQVVDCRICGDPHSVLRFAFIEFADEEGARTALNLGGTMLGFYPVRVLPSKTA 208
Query: 256 IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 315
I PVNP FLPR+EDE+EM RT+YCTNIDKKVTQ D+K FFE +CGEV RLRLLGD HS
Sbjct: 209 ILPVNPKFLPRTEDEKEMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVHS 268
Query: 316 TRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
TRIAFVEF AE AI ALNCSG +LG+LP+RVSPSKTPV+PR R
Sbjct: 269 TRIAFVEFVHAECAIMALNCSGMILGTLPVRVSPSKTPVKPRLNR 313
>gi|15220902|ref|NP_175769.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
gi|12324022|gb|AAG51971.1|AC024260_9 RNA-binding protein, putative; 40942-42923 [Arabidopsis thaliana]
gi|48427656|gb|AAT42377.1| At1g53650 [Arabidopsis thaliana]
gi|332194855|gb|AEE32976.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
Length = 314
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/278 (63%), Positives = 202/278 (72%), Gaps = 17/278 (6%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIM--HTDGTANT 144
+M+ LV M KLNP A EF P N +++F++ G N
Sbjct: 49 QMKKLVAMFKKLNPEAKEFFPSYKRNTN---------------QSDDFVIAIKPSGEDNK 93
Query: 145 NGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQ 204
RR+ N + R+ R S AQ+++ IRRTVYVSDIDQ VTEE LA LF +CGQ
Sbjct: 94 KVAINRRRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQ 153
Query: 205 VVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
VVDCRICGDPNSVLRFAFVEF+D++GAR+ALSL GTM+G+YPVRVLPSKTAI PVNPTFL
Sbjct: 154 VVDCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFL 213
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
PRSEDEREMCSRTIYCTN+DK T+ D+ FF+S CGEV RLRLLGD HSTRIAFVEFA
Sbjct: 214 PRSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFA 273
Query: 325 MAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 362
MAESA+AALNCSG VLGS PIRVSPSKTPVR R R P
Sbjct: 274 MAESAVAALNCSGIVLGSQPIRVSPSKTPVRSRITRSP 311
>gi|388522717|gb|AFK49420.1| unknown [Medicago truncatula]
Length = 188
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 160/188 (85%), Positives = 177/188 (94%), Gaps = 1/188 (0%)
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
+IRRTVYVSDIDQ VTEEQLA+LFL CGQVVDCR+CGDPNS+LRFAF+EFTDEE ARAA+
Sbjct: 1 MIRRTVYVSDIDQLVTEEQLASLFLNCGQVVDCRVCGDPNSILRFAFIEFTDEESARAAV 60
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
SL+GTMLG+YP+RVLPSKTAIAPVNPT LPRSEDEREMCSRTIYCTNIDKK+TQ D+K F
Sbjct: 61 SLSGTMLGYYPLRVLPSKTAIAPVNPTSLPRSEDEREMCSRTIYCTNIDKKLTQADVKHF 120
Query: 296 FESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
FES+CGEV RLRLLGDYQHSTRIAFVEFA+AESAIAAL+CSG +LG+LPIRVSPSKTPVR
Sbjct: 121 FESICGEVHRLRLLGDYQHSTRIAFVEFAVAESAIAALSCSGVILGALPIRVSPSKTPVR 180
Query: 356 PR-APRPP 362
R +PR P
Sbjct: 181 ARSSPRSP 188
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID+++T+ + F + CG+V R+ GD R AFVEF E A
Sbjct: 95 EREMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHSTRIAFVEFAVAESA 154
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
AALS +G +LG P+RV PSKT PV PRS
Sbjct: 155 IAALSCSGVILGALPIRVSPSKT---PVRARSSPRS 187
>gi|297812631|ref|XP_002874199.1| ctc-interacting domain 13 [Arabidopsis lyrata subsp. lyrata]
gi|297320036|gb|EFH50458.1| ctc-interacting domain 13 [Arabidopsis lyrata subsp. lyrata]
Length = 313
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 182/357 (50%), Positives = 231/357 (64%), Gaps = 51/357 (14%)
Query: 1 MAVAENAGAKIDSSN-QNLDDTVVSSDSNDVQNSNDHSKERSGNGNANIQIQNGQTKPGA 59
MAVAEN G K+DSS+ QNLD+ S +D + + + + N IQ
Sbjct: 1 MAVAENVGVKVDSSDDQNLDNNTTSLAETKPSCPDDQTPKSNSSVLTNELIQ-------- 52
Query: 60 GAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFN 119
+ E+ DL+ +S+LNPMA EFVP LA
Sbjct: 53 ------------------------RTSEV-DLMSEISRLNPMAKEFVPSFLAQTH----- 82
Query: 120 PAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRR 179
+ F + +TNNF + T R + QG+R +N +T+ Q ++VI+R
Sbjct: 83 -SEFLRSRLWFTNNFPVQAISTM-----------RRSFGQGRRWINKKTNLVQNEDVIKR 130
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 239
TVYVSDIDQQVTEEQLA+LFL+CGQVVDCRICGD S+LRFAF+EFTD EGAR+AL +G
Sbjct: 131 TVYVSDIDQQVTEEQLASLFLSCGQVVDCRICGDHKSILRFAFIEFTDAEGARSALRKSG 190
Query: 240 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 299
T+ G +P+RV SKTAIAPVNP+FLPRSE+E E C +T+YCTNIDK+VT+ +++ FF++V
Sbjct: 191 TVFGSHPIRVHISKTAIAPVNPSFLPRSEEELEKCGKTVYCTNIDKQVTKMELENFFKTV 250
Query: 300 CGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRP 356
CGEV LRLLGD+ H TRIAFVEF +AESAI+ALN SG VLG LPIR+SPSKTPVRP
Sbjct: 251 CGEVHHLRLLGDFYHQTRIAFVEFKLAESAISALNYSGVVLGELPIRISPSKTPVRP 307
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 331
++ RT+Y ++ID++VT+ + F S CG+V R+ GD++ R AF+EF AE A +
Sbjct: 126 DVIKRTVYVSDIDQQVTEEQLASLFLS-CGQVVDCRICGDHKSILRFAFIEFTDAEGARS 184
Query: 332 ALNCSGAVLGSLPIRVSPSKTPVRPRAP 359
AL SG V GS PIRV SKT + P P
Sbjct: 185 ALRKSGTVFGSHPIRVHISKTAIAPVNP 212
>gi|242051635|ref|XP_002454963.1| hypothetical protein SORBIDRAFT_03g002180 [Sorghum bicolor]
gi|241926938|gb|EES00083.1| hypothetical protein SORBIDRAFT_03g002180 [Sorghum bicolor]
Length = 298
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 173/276 (62%), Positives = 206/276 (74%), Gaps = 6/276 (2%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSLAN--GQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTN 145
++ LVD+LSKLNP A EFVP + A+ + + + F G N TD
Sbjct: 22 VQKLVDLLSKLNPAAKEFVPSAAASPPKKALSADAPVFDYRSIGGGNG---ATDAAFYVG 78
Query: 146 GHTTTRRKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQ 204
RR+ NGY +QG+RR N R A++++ IRRTVYVS++D VTEE+LA +F TCGQ
Sbjct: 79 FGNQHRRRGNGYINQGRRRTNDRVRRAEREDSIRRTVYVSELDHTVTEERLADIFATCGQ 138
Query: 205 VVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
VVDCRICGDP+SVLRFAF+EF+DEEGAR AL+L GT+ GFYPVRVLPSKTAI PVNP FL
Sbjct: 139 VVDCRICGDPHSVLRFAFIEFSDEEGARTALNLGGTIFGFYPVRVLPSKTAILPVNPKFL 198
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
PR+EDE+EM RT+YCTNIDK VTQ D+K FFE +CGEV RLRLLGD HSTRIAFVEF
Sbjct: 199 PRTEDEKEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFV 258
Query: 325 MAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
AE AI ALNCSG +LG+LP+RVSPSKTPV+PR R
Sbjct: 259 HAEGAIMALNCSGMILGTLPVRVSPSKTPVKPRVNR 294
>gi|357140847|ref|XP_003571974.1| PREDICTED: uncharacterized protein LOC100841044 [Brachypodium
distachyon]
Length = 350
Score = 333 bits (855), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 183/294 (62%), Positives = 220/294 (74%), Gaps = 20/294 (6%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSL-------------ANGQIFNFNPAFFGP-----NGF 128
+MR L +++SKLNP A EFVP S A+ +F FFG G
Sbjct: 53 DMRKLEELMSKLNPCAQEFVPSSRRAASAPAPGGGLSADAPVFVSAAEFFGAGAGQLQGT 112
Query: 129 GYTNNFIMHTDGTANTNGHTTTRR-KRNG-YSQGKRRMNCRTSNAQQDEVIRRTVYVSDI 186
G +DG++N G RR +RNG ++QG+RRM RT + +++ +RRTVYVSD+
Sbjct: 113 GAGGGRDSSSDGSSNGGGQPQNRRIRRNGSFNQGRRRMGGRTRRSDREDSVRRTVYVSDV 172
Query: 187 DQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYP 246
DQQVTE++LA +F CGQVVDCRICGDP+SVLRFAF+EF D+ GARAAL+LAGTMLG+YP
Sbjct: 173 DQQVTEQKLAEVFSNCGQVVDCRICGDPHSVLRFAFIEFADDAGARAALNLAGTMLGYYP 232
Query: 247 VRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRL 306
VRVLPSKTAI PVNP FLPR+EDE+EM SRT+YCTNIDKKVT+ D+K+FF+ +CG+V RL
Sbjct: 233 VRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKKVTEDDVKIFFQRLCGKVSRL 292
Query: 307 RLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
RLLGDY HST IAFVEF AESAI ALN SG VLGSLPIRVSPSKTPVRPR+PR
Sbjct: 293 RLLGDYVHSTCIAFVEFTQAESAILALNYSGLVLGSLPIRVSPSKTPVRPRSPR 346
>gi|15238531|ref|NP_197832.1| CTC-interacting domain 13 protein [Arabidopsis thaliana]
gi|9758532|dbj|BAB08927.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|332005928|gb|AED93311.1| CTC-interacting domain 13 protein [Arabidopsis thaliana]
Length = 320
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/356 (50%), Positives = 230/356 (64%), Gaps = 44/356 (12%)
Query: 1 MAVAENAGAKIDSS-NQNLDDTVVSSDSNDVQNSNDHSKERSGNGNANIQIQNGQTKPGA 59
MAVAEN G K+DSS NQN+D+ S S+D + + + N IQ
Sbjct: 1 MAVAENVGVKVDSSNNQNIDNNTTSLVETKPSCSDDQTPKSKSSVLTNELIQRTSE---- 56
Query: 60 GAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFN 119
VN+ + +H LNPMA EFVP LA +
Sbjct: 57 ------VNLKSEISH-----------------------LNPMAKEFVPSFLAQTH----H 83
Query: 120 PAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRR 179
F+G N F +TN+F T G T R+ + +G+ + +T+ Q +++I+R
Sbjct: 84 SEFWG-NRFWFTNHF---PKQTIFLIGQFATMRR--NFGKGRPWITKKTNLVQNEDMIKR 137
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 239
TVYVSDID QVTEEQLA+LFL+CGQVVDCR+CGD S+LRFAF+EFTD EGAR+AL +G
Sbjct: 138 TVYVSDIDNQVTEEQLASLFLSCGQVVDCRMCGDYKSILRFAFIEFTDAEGARSALRKSG 197
Query: 240 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 299
TM G +P+RV SKTAIAPVNP+FLP+S+DE E C +T+YCTNIDK+VT+ +++ FF++V
Sbjct: 198 TMFGSHPIRVFMSKTAIAPVNPSFLPQSKDELEKCGKTVYCTNIDKEVTKMELENFFKTV 257
Query: 300 CGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
CGEV LRLLGD+ H TRIAFVEF +AESAI+ALNCSG VLG LPIRVSPSKTPVR
Sbjct: 258 CGEVHHLRLLGDFYHQTRIAFVEFKLAESAISALNCSGVVLGELPIRVSPSKTPVR 313
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 331
+M RT+Y ++ID +VT+ + F S CG+V R+ GDY+ R AF+EF AE A +
Sbjct: 133 DMIKRTVYVSDIDNQVTEEQLASLFLS-CGQVVDCRMCGDYKSILRFAFIEFTDAEGARS 191
Query: 332 ALNCSGAVLGSLPIRVSPSKTPVRPRAP 359
AL SG + GS PIRV SKT + P P
Sbjct: 192 ALRKSGTMFGSHPIRVFMSKTAIAPVNP 219
>gi|449438949|ref|XP_004137250.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus]
gi|449483120|ref|XP_004156498.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus]
Length = 306
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 170/281 (60%), Positives = 209/281 (74%), Gaps = 22/281 (7%)
Query: 91 LVDMLSKLNPMAAEFVPPSLANG--QIFNFNPAFFGPNGFGYTNNF-----IMHTDGTAN 143
L +M S LNP+A EF P S ++ Q F+F ++ N NF ++H+D
Sbjct: 32 LAEMFSNLNPLAKEFFPSSYSHHDRQDFHF---YYQNNNRSLAKNFQVADQLLHSDNN-- 86
Query: 144 TNGHTTTRRKRNGYS-QGKRRMNC-RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT 201
RR+R ++ QG+RRMN R+ AQQ+E IRRTVYVSDID+ V+EE+LA +F
Sbjct: 87 -------RRRRPEFNNQGRRRMNNNRSVRAQQEESIRRTVYVSDIDKDVSEEELAKVFRE 139
Query: 202 -CGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVN 260
CG V DCRICGDP+SVLRFAFVEF +E ARAA+ L+GT++G YPV+VLPSKTAI PVN
Sbjct: 140 FCGYVNDCRICGDPHSVLRFAFVEFANEHSARAAVGLSGTVVGSYPVKVLPSKTAILPVN 199
Query: 261 PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF 320
PTFLP+S DE +MC+RTIYCTNIDKKV+Q ++K FFE+ CGEV RLRLLGD HSTRIAF
Sbjct: 200 PTFLPKSNDEWDMCTRTIYCTNIDKKVSQAEVKSFFETSCGEVTRLRLLGDQLHSTRIAF 259
Query: 321 VEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRP 361
VEFA+AE+A+ ALNCSG +LG+ PIRVSPSKTPVRPR RP
Sbjct: 260 VEFALAETALQALNCSGMILGAQPIRVSPSKTPVRPRVTRP 300
>gi|357127346|ref|XP_003565343.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Brachypodium distachyon]
Length = 310
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 175/279 (62%), Positives = 208/279 (74%), Gaps = 4/279 (1%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLA--NGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANT 144
+++ LVD+LS LNP A EFVP S A + + + + F G N G +T
Sbjct: 31 DVQKLVDLLSNLNPAAREFVPSSAAPPSKKALSADAPVFDYCSIGGANGG-SRDSGVDST 89
Query: 145 NGHTTTRRKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG 203
+ R+GY + G+RRMN R A +++ IRRTVYVS++D VTEE+LA +F CG
Sbjct: 90 YIGNQQHKMRSGYINHGRRRMNERARRADREDSIRRTVYVSELDHTVTEERLADIFANCG 149
Query: 204 QVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTF 263
QVVDCRICGDP+SVLRFAF+EF+DEEGARAAL+L GTMLGFYPVRVLPSKTAI PVNP F
Sbjct: 150 QVVDCRICGDPHSVLRFAFIEFSDEEGARAALNLGGTMLGFYPVRVLPSKTAILPVNPKF 209
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
LPR+EDE+EM RTIYCTNIDKKVTQ D+K FF+ +CGEV RLRLLGD HSTRIAFVEF
Sbjct: 210 LPRTEDEKEMVIRTIYCTNIDKKVTQLDVKSFFQELCGEVSRLRLLGDNVHSTRIAFVEF 269
Query: 324 AMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 362
AE AI ALNCSG +LG+LP+RVSPSKTPV+PR R P
Sbjct: 270 VNAEGAIMALNCSGMILGTLPVRVSPSKTPVKPRINRVP 308
>gi|326502318|dbj|BAJ95222.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 317
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 177/293 (60%), Positives = 207/293 (70%), Gaps = 15/293 (5%)
Query: 78 KMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLA---------NGQIFNFNPAFFGPNGF 128
K E KD ++ LVD+LSKLNP A EFVP S A + +F + G
Sbjct: 26 KEAEYHKD--VQKLVDLLSKLNPAAKEFVPSSAAATPRKGLSADAPVFYYGSIGGRNGGI 83
Query: 129 GYTNNFIMHTDGTANTNGHTTTRRKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDID 187
G +I + + +RNGY + G+RR N R A ++E IRRTVYVS++D
Sbjct: 84 GADAGYIGYQQ---RMRRNFVDNERRNGYINHGRRRTNERARRADREESIRRTVYVSELD 140
Query: 188 QQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV 247
VTEE+LA +F CGQVVDCRICGDPNSV+RFAF+EF EEGARAAL+L GTMLGFYPV
Sbjct: 141 HTVTEERLAEIFANCGQVVDCRICGDPNSVMRFAFIEFAGEEGARAALNLGGTMLGFYPV 200
Query: 248 RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLR 307
RVLPSKTAI PVNP FLP +EDE+EM RT+YCTNIDKKVTQ D+K FFE +CGEV RLR
Sbjct: 201 RVLPSKTAILPVNPKFLPATEDEKEMVIRTVYCTNIDKKVTQLDVKSFFEELCGEVSRLR 260
Query: 308 LLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
LLGD HSTRIAFVEF AE AI ALNCSG +LG+LP+RVSPSKTPV+PR R
Sbjct: 261 LLGDNVHSTRIAFVEFVNAEGAIQALNCSGMILGTLPVRVSPSKTPVKPRLNR 313
>gi|326514092|dbj|BAJ92196.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532980|dbj|BAJ89335.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 351
Score = 330 bits (846), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 173/299 (57%), Positives = 211/299 (70%), Gaps = 28/299 (9%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANG----QIFNFNPAFFGP--------NGFGYTNNF 134
++R L ++ KLNP A EFVP S G ++ P F P + F +
Sbjct: 52 DVRKLEELFKKLNPSAEEFVPLSRRQGDGARRLSADAPVFVSPAIDYYAPHHPFQHQQMH 111
Query: 135 IMH-------------TDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTV 181
++ +DG+AN RR+RNG++QG+RRM R +++ +RRTV
Sbjct: 112 VLQVVGGGGGAGRDSSSDGSANGQ---PNRRRRNGFNQGRRRMGVRPRRTDREDSVRRTV 168
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
YVSDIDQ VTE++LA +F CGQVVDCRICGDPNSV+RFAF+EF D+ GARAAL+L GT+
Sbjct: 169 YVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVMRFAFIEFADDVGARAALALGGTV 228
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCG 301
LGFYPVRVLPSKTAI PVNP FLPR+EDE+EM SRT+YCTNIDK V + +K FFE +CG
Sbjct: 229 LGFYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDVVKNFFEGICG 288
Query: 302 EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
EV RLRLLGDY H+T IAFVEF AE AI ALNCSG +LGSLP+RVSPSKTPVRPR+PR
Sbjct: 289 EVARLRLLGDYVHATCIAFVEFVEAEGAILALNCSGMLLGSLPVRVSPSKTPVRPRSPR 347
>gi|226507984|ref|NP_001149092.1| LOC100282713 [Zea mays]
gi|195624680|gb|ACG34170.1| CID11 [Zea mays]
gi|414875767|tpg|DAA52898.1| TPA: CID11 [Zea mays]
Length = 299
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 170/276 (61%), Positives = 204/276 (73%), Gaps = 6/276 (2%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSLAN--GQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTN 145
++ LVD+LS LNP A EFVP + A+ + + + F + G N TD
Sbjct: 23 VQKLVDLLSNLNPAAKEFVPSAAASPPKKALSADAPVFDYHSIGGGNG---ATDAAFYVG 79
Query: 146 GHTTTRRKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQ 204
R + NGY +QG+RR N R A +++ IRRTVYVS++D VTEE+LA +F TCGQ
Sbjct: 80 FGHQPRTRGNGYINQGRRRTNGRVRRADREDSIRRTVYVSELDHTVTEERLADIFTTCGQ 139
Query: 205 VVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
VVDCRICGDP+SVLRFAF+EF+DEEGAR AL+L GT+ GFYPVRVLPSKTAI PVNP FL
Sbjct: 140 VVDCRICGDPHSVLRFAFIEFSDEEGARTALNLGGTIFGFYPVRVLPSKTAILPVNPKFL 199
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
PR++DE+EM RT+YCTNIDK VTQ D+K FFE +CGEV RLRLLGD HSTRIAFVEF
Sbjct: 200 PRTDDEKEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFV 259
Query: 325 MAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
AE AI ALNCSG +LG+LP+RVSPSKTPV+PR R
Sbjct: 260 HAEGAIMALNCSGMILGTLPVRVSPSKTPVKPRVNR 295
>gi|357124236|ref|XP_003563809.1| PREDICTED: uncharacterized protein LOC100835921 [Brachypodium
distachyon]
Length = 351
Score = 327 bits (838), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 176/303 (58%), Positives = 212/303 (69%), Gaps = 28/303 (9%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSL--ANG--QIFNFNPAFFGPNGFGYTNNFIM------ 136
++R L ++ KLNP A EFVP S A+G ++ P F P Y +
Sbjct: 52 DVRKLEELFKKLNPSAEEFVPLSRRQADGGRRLSADAPVFVSPAIDYYAPHHPFQQQQPQ 111
Query: 137 ---------------HTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTV 181
+DG+ N + RR+RNG++QG+RRM R +++ +RRTV
Sbjct: 112 QMHVLQVVGGGGRDSSSDGSVNGQPN---RRRRNGFNQGRRRMGPRPRRTDREDSVRRTV 168
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
YVSDIDQ VTE++LA +F CGQVVDCRICGDPNSV+RFAF+EF D+ GARAALSLAGT+
Sbjct: 169 YVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVMRFAFIEFADDVGARAALSLAGTI 228
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCG 301
LG+YPVRVLPSKTAI PVNP FLPR+EDE+EM SRT+YCTNIDK V + +K FFE +CG
Sbjct: 229 LGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDVVKKFFEGICG 288
Query: 302 EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRP 361
EV RLRLLGDY HST IAFVEF AE AI ALNCSG +LGSLP+RVSPSKTPVRPR+PR
Sbjct: 289 EVARLRLLGDYVHSTCIAFVEFVQAEGAIMALNCSGMLLGSLPVRVSPSKTPVRPRSPRA 348
Query: 362 PLH 364
H
Sbjct: 349 MSH 351
>gi|297829996|ref|XP_002882880.1| ctc-interacting domain 9 [Arabidopsis lyrata subsp. lyrata]
gi|297328720|gb|EFH59139.1| ctc-interacting domain 9 [Arabidopsis lyrata subsp. lyrata]
Length = 337
Score = 327 bits (838), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 173/283 (61%), Positives = 200/283 (70%), Gaps = 12/283 (4%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPA--FFGPNGFGYTNNFIMHT-DGTAN 143
+M+ LV M KLNP+A EF P + + A F + F TN D A
Sbjct: 57 DMQKLVAMFKKLNPLAKEFFPSYYDPKKNHHVGKANQFLSADDFATTNKQSGEEFDPDAK 116
Query: 144 TNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG 203
+ +T RKR YSQG+RR+ R S AQ+++ IRRTVYVSDIDQ VTEE LA LF CG
Sbjct: 117 KDDNT---RKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSNCG 173
Query: 204 QVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVL----PSKTAIAPV 259
QVVDCRICGDP+SVLRFAFVEF D++GAR ALSL GTMLGFYPVRV S++ I+
Sbjct: 174 QVVDCRICGDPHSVLRFAFVEFADDQGAREALSLGGTMLGFYPVRVKNCHSTSESHISSK 233
Query: 260 NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIA 319
SEDEREMC+RTIYCTNIDKKV+Q D++ FFES CGEV RLRLLGD HSTRIA
Sbjct: 234 GK--CSDSEDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIA 291
Query: 320 FVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 362
FVEF +A+SA+ ALNCSG V+GS PIRVSPSKTPVRPR RPP
Sbjct: 292 FVEFTLADSALRALNCSGMVVGSQPIRVSPSKTPVRPRITRPP 334
>gi|218190389|gb|EEC72816.1| hypothetical protein OsI_06525 [Oryza sativa Indica Group]
Length = 287
Score = 326 bits (836), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 175/283 (61%), Positives = 211/283 (74%), Gaps = 17/283 (6%)
Query: 95 LSKLNPMAAEFVPPSL---------------ANGQIFNFNPAFFGPNGFGYTNNFIMHTD 139
+SKLNP A EFVP S A+ +F +F +G G +
Sbjct: 1 MSKLNPRAQEFVPSSRRAPPSSAAQAAVGLSADAPVFVSAAEYFVGSGAGAGGVGGRDSS 60
Query: 140 GTANTNG--HTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLAT 197
++NG RR+R+G++QG+RR RT A +++ +RRTVYVSDIDQQVTE++LA
Sbjct: 61 SDGSSNGGGQPQNRRRRSGFNQGRRRTGGRTRRADREDSVRRTVYVSDIDQQVTEQKLAE 120
Query: 198 LFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIA 257
+F CGQVVDCRICGDP+SVLRFAF+EF D+ GARAAL+L GTMLG+YPVRVLPSKTAI
Sbjct: 121 VFSNCGQVVDCRICGDPHSVLRFAFIEFADDAGARAALTLGGTMLGYYPVRVLPSKTAIL 180
Query: 258 PVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR 317
PVNP FLPR+EDE+EM SRT+YCTNIDKKVT+ D+K+FF+ +CG+V RLRLLGDY HST
Sbjct: 181 PVNPKFLPRTEDEKEMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTC 240
Query: 318 IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
IAFVEFA AESAI ALN SG VLG+LPIRVSPSKTPVRPR+PR
Sbjct: 241 IAFVEFAQAESAILALNYSGMVLGTLPIRVSPSKTPVRPRSPR 283
>gi|115445273|ref|NP_001046416.1| Os02g0244600 [Oryza sativa Japonica Group]
gi|50252270|dbj|BAD28276.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113535947|dbj|BAF08330.1| Os02g0244600 [Oryza sativa Japonica Group]
Length = 359
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/210 (74%), Positives = 185/210 (88%)
Query: 151 RRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 210
RR+R+G++QG+RR RT A +++ +RRTVYVSDIDQQVTE++LA +F CGQVVDCRI
Sbjct: 146 RRRRSGFNQGRRRTGGRTRRADREDSVRRTVYVSDIDQQVTEQKLAEVFSNCGQVVDCRI 205
Query: 211 CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE 270
CGDP+SVLRFAF+EF D+ GARAAL+L GTMLG+YPVRVLPSKTAI PVNP FLPR+EDE
Sbjct: 206 CGDPHSVLRFAFIEFADDAGARAALTLGGTMLGYYPVRVLPSKTAILPVNPKFLPRTEDE 265
Query: 271 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAI 330
+EM SRT+YCTNIDKKVT+ D+K+FF+ +CG+V RLRLLGDY HST IAFVEFA AESAI
Sbjct: 266 KEMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTCIAFVEFAQAESAI 325
Query: 331 AALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
ALN SG VLG+LPIRVSPSKTPVRPR+PR
Sbjct: 326 LALNYSGMVLGTLPIRVSPSKTPVRPRSPR 355
>gi|125581461|gb|EAZ22392.1| hypothetical protein OsJ_06050 [Oryza sativa Japonica Group]
Length = 299
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/210 (74%), Positives = 185/210 (88%)
Query: 151 RRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 210
RR+R+G++QG+RR RT A +++ +RRTVYVSDIDQQVTE++LA +F CGQVVDCRI
Sbjct: 86 RRRRSGFNQGRRRTGGRTRRADREDSVRRTVYVSDIDQQVTEQKLAEVFSNCGQVVDCRI 145
Query: 211 CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE 270
CGDP+SVLRFAF+EF D+ GARAAL+L GTMLG+YPVRVLPSKTAI PVNP FLPR+EDE
Sbjct: 146 CGDPHSVLRFAFIEFADDAGARAALTLGGTMLGYYPVRVLPSKTAILPVNPKFLPRTEDE 205
Query: 271 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAI 330
+EM SRT+YCTNIDKKVT+ D+K+FF+ +CG+V RLRLLGDY HST IAFVEFA AESAI
Sbjct: 206 KEMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTCIAFVEFAQAESAI 265
Query: 331 AALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
ALN SG VLG+LPIRVSPSKTPVRPR+PR
Sbjct: 266 LALNYSGMVLGTLPIRVSPSKTPVRPRSPR 295
>gi|413941689|gb|AFW74338.1| hypothetical protein ZEAMMB73_453710 [Zea mays]
Length = 182
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 151/176 (85%), Positives = 165/176 (93%)
Query: 189 QVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVR 248
+VTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+LG+YPVR
Sbjct: 7 RVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPVR 66
Query: 249 VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 308
VLPSKTAIAPVNPTFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CGEV RLRL
Sbjct: 67 VLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRL 126
Query: 309 LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
LGDY HSTRIAFVEF MAESA AALNCSG +LGSLPIRVSPSKTPVRPRAPR +H
Sbjct: 127 LGDYHHSTRIAFVEFVMAESATAALNCSGVILGSLPIRVSPSKTPVRPRAPRQLMH 182
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++VT+ L F + CG+V R+ GD + R AFVEF E A
Sbjct: 88 EREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESA 147
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV PSKT + P P
Sbjct: 148 TAALNCSGVILGSLPIRVSPSKTPVRPRAP 177
>gi|242093252|ref|XP_002437116.1| hypothetical protein SORBIDRAFT_10g021290 [Sorghum bicolor]
gi|241915339|gb|EER88483.1| hypothetical protein SORBIDRAFT_10g021290 [Sorghum bicolor]
Length = 364
Score = 322 bits (825), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 175/311 (56%), Positives = 211/311 (67%), Gaps = 38/311 (12%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSL--ANGQIFNFN---PAFFGPNGFGYTNNFI------ 135
++R L ++ SKLNP A EFVPPS +G + P F P Y +
Sbjct: 51 DIRKLEELFSKLNPSAEEFVPPSRRRVDGGARRLSADAPVFVSPAIDYYARHHQLPPPPL 110
Query: 136 -----MHT--------------------DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSN 170
MH + NG RR+RNG+ QG+RRM
Sbjct: 111 QQQQPMHVLQFVGGVGGGGMGGGGGRDSSSDGSVNGQPN-RRRRNGFIQGRRRMMGGRPR 169
Query: 171 -AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE 229
+ +++ +RRTVYVSDIDQ VTE++LA +F TCGQVVDCRICGDPNSVLRFAF+EF D+
Sbjct: 170 RSDREDSVRRTVYVSDIDQHVTEQKLAEVFSTCGQVVDCRICGDPNSVLRFAFIEFADDV 229
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 289
GA+AAL+L GT+LGFYPV+VLPSKTAI PVNP FLPR+EDE+EM SRT+YCTNIDKK+ +
Sbjct: 230 GAQAALALGGTVLGFYPVKVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKKIGE 289
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSP 349
++K FFE CGEV RLRLLGDY HST IAFVEF A+SAI ALNCSG VLG+LP+RVSP
Sbjct: 290 DEVKQFFEGTCGEVSRLRLLGDYVHSTCIAFVEFVQADSAILALNCSGIVLGTLPVRVSP 349
Query: 350 SKTPVRPRAPR 360
SKTPVRPR+PR
Sbjct: 350 SKTPVRPRSPR 360
>gi|226530673|ref|NP_001141946.1| uncharacterized protein LOC100274095 [Zea mays]
gi|194706550|gb|ACF87359.1| unknown [Zea mays]
gi|195626910|gb|ACG35285.1| CID11 [Zea mays]
gi|413947723|gb|AFW80372.1| CID11 [Zea mays]
Length = 302
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 170/287 (59%), Positives = 204/287 (71%), Gaps = 24/287 (8%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSL-------------ANGQIFNFNPAFFGPNGFGYTNNF 134
++ LVD+LS LNP A EFVP S A+ +F++ G NG
Sbjct: 22 VQKLVDLLSNLNPAAKEFVPSSAPAAAASPPKKALSADAPVFDYRSTA-GGNG------- 73
Query: 135 IMHTDGTANTNGHTTTRRKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEE 193
TD R++ NGY +QG+RR N R A +++ +RRTVYVS++D VTEE
Sbjct: 74 --ATDDPFYVGFGNQQRKRGNGYINQGRRRTNDRLRRADREDSVRRTVYVSELDHTVTEE 131
Query: 194 QLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK 253
+LA +F TCG VVDCRICGDP+SVLRFAF+EF+DEEGAR AL+L GT+ GFYPVRVLPSK
Sbjct: 132 RLADIFATCGHVVDCRICGDPHSVLRFAFIEFSDEEGARTALNLGGTIFGFYPVRVLPSK 191
Query: 254 TAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ 313
TAI PVNP FLPR++DE+EM RT+YCTNIDK VTQ D+K FFE +CGEV RLRLLGD
Sbjct: 192 TAILPVNPKFLPRTDDEKEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNV 251
Query: 314 HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
HSTRIAFVEF AE AI ALNCSG +LG+LP+RVSPSKTPV+PR R
Sbjct: 252 HSTRIAFVEFVHAEGAIMALNCSGMILGTLPVRVSPSKTPVKPRVNR 298
>gi|297853152|ref|XP_002894457.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297340299|gb|EFH70716.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 769
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 164/257 (63%), Positives = 187/257 (72%), Gaps = 14/257 (5%)
Query: 94 MLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIM--HTDGTANTNGHTTTR 151
M KLNP A EF P N N +++F++ G N R
Sbjct: 1 MFKKLNPEAKEFFPSYKKNT------------NQSLSSDDFVIAKKPSGEDNKKDGINRR 48
Query: 152 RKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 211
R+ N + R+ R S AQ++ IRRTVYVSDIDQ VTEE LA LF +CGQVVDCRIC
Sbjct: 49 RRNNYNQGRRVRLPGRASKAQREVSIRRTVYVSDIDQSVTEEVLAGLFSSCGQVVDCRIC 108
Query: 212 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
GDPNSVLRFAFVEF+D++GARAALSL GTM+G+YPVRVLPSKTAI PVNPTFLPRSEDER
Sbjct: 109 GDPNSVLRFAFVEFSDDQGARAALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDER 168
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 331
EMC+RTIYCTN+DK T+ +K FF+S CGEV RLRLLGD HSTRIAFVEFAMAESA+A
Sbjct: 169 EMCTRTIYCTNVDKNATEDVVKTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVA 228
Query: 332 ALNCSGAVLGSLPIRVS 348
ALNCSG VLGS PIR+S
Sbjct: 229 ALNCSGIVLGSQPIRLS 245
>gi|8671859|gb|AAF78422.1|AC018748_1 Contains similarity to RNA-binding protein from Arabidopsis
thaliana gi|2129727 and contains RNA recognition
PF|00076 domain. ESTs gb|H37317, gb|F14415, gb|AA651290
come from this gene [Arabidopsis thaliana]
Length = 829
Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 162/256 (63%), Positives = 185/256 (72%), Gaps = 17/256 (6%)
Query: 94 MLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIM--HTDGTANTNGHTTTR 151
M KLNP A EF P N +++F++ G N R
Sbjct: 1 MFKKLNPEAKEFFPSYKRNTN---------------QSDDFVIAIKPSGEDNKKVAINRR 45
Query: 152 RKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 211
R+ N + R+ R S AQ+++ IRRTVYVSDIDQ VTEE LA LF +CGQVVDCRIC
Sbjct: 46 RRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRIC 105
Query: 212 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
GDPNSVLRFAFVEF+D++GAR+ALSL GTM+G+YPVRVLPSKTAI PVNPTFLPRSEDER
Sbjct: 106 GDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDER 165
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 331
EMCSRTIYCTN+DK T+ D+ FF+S CGEV RLRLLGD HSTRIAFVEFAMAESA+A
Sbjct: 166 EMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVA 225
Query: 332 ALNCSGAVLGSLPIRV 347
ALNCSG VLGS PI V
Sbjct: 226 ALNCSGIVLGSQPISV 241
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y ++ID+ VT+ + F S CG+V R+ GD R AFVEF+ + A +AL+
Sbjct: 73 RTVYVSDIDQSVTEEGLAGLFSS-CGQVVDCRICGDPNSVLRFAFVEFSDDQGARSALSL 131
Query: 336 SGAVLGSLPIRVSPSKTPVRPRAP 359
G ++G P+RV PSKT + P P
Sbjct: 132 GGTMIGYYPVRVLPSKTAILPVNP 155
>gi|62867578|emb|CAI84654.1| hypothetical protein [Nicotiana tabacum]
Length = 201
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/197 (76%), Positives = 167/197 (84%)
Query: 164 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFV 223
MN R AQ+++ IRRTVYV++ID VTEEQLA LF GQVVDCRICGDP+S LRFAFV
Sbjct: 1 MNNRAYKAQREDSIRRTVYVAEIDNNVTEEQLAALFSAYGQVVDCRICGDPHSRLRFAFV 60
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 283
EF DE ARAALSL GT+LGF P++VLPSKTAI PVNPTFLPRSEDEREMC+RT+YCTNI
Sbjct: 61 EFADEYSARAALSLCGTILGFSPLKVLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNI 120
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSL 343
DKKVTQ D+K FFE+ CGEV RLRLLGD+ HSTRIAFVEF MAESAI AL+C G +LGS
Sbjct: 121 DKKVTQADVKNFFETRCGEVSRLRLLGDHVHSTRIAFVEFVMAESAILALDCCGEILGSQ 180
Query: 344 PIRVSPSKTPVRPRAPR 360
IRVSPSKTPVRPR PR
Sbjct: 181 RIRVSPSKTPVRPRLPR 197
>gi|212274583|ref|NP_001130716.1| hypothetical protein [Zea mays]
gi|194689926|gb|ACF79047.1| unknown [Zea mays]
gi|413954111|gb|AFW86760.1| hypothetical protein ZEAMMB73_977651 [Zea mays]
Length = 365
Score = 312 bits (799), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 173/314 (55%), Positives = 210/314 (66%), Gaps = 39/314 (12%)
Query: 85 DCEMRDLVDMLSKLNPMAAEFVPPSL--ANGQIFNFN---PAFFGPNGFGYTNNFI---- 135
+ +MR L ++LSKLNP A EFVP S +G + P F P Y +
Sbjct: 49 ESDMRKLEELLSKLNPSAEEFVPQSRRRVDGGAPRLSADAPVFVSPAIDYYARHHQLPPP 108
Query: 136 --------MHT--------------------DGTANTNGHTTTRRKRNGYSQGKRRM-NC 166
MH + NG RR+RNG+ QG+RRM
Sbjct: 109 PLLQQQQPMHVLQFVGGVGGVGMGGGGGMDSSSDGSANGQPN-RRRRNGFIQGRRRMMGA 167
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 226
R A +++ +RRTVYVSD+DQ VTE++LA +F TCGQVVDCRICGDPNSVLRFAF+EF
Sbjct: 168 RPRRADREDSVRRTVYVSDVDQHVTEQKLAEVFSTCGQVVDCRICGDPNSVLRFAFIEFA 227
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 286
D+ A+AAL+L GT+LGFYPV+VLPSKTAI PVNP FLP ++DE+EM SRT+YCTNIDKK
Sbjct: 228 DDVAAQAALALGGTVLGFYPVKVLPSKTAILPVNPKFLPHTDDEKEMVSRTVYCTNIDKK 287
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIR 346
+ + ++K FFE CGEV RLRLLGDY HST IAFVEF A+SAI ALNCSG VLG+LP+R
Sbjct: 288 IAEDEVKQFFEGTCGEVSRLRLLGDYVHSTCIAFVEFVQADSAILALNCSGIVLGTLPVR 347
Query: 347 VSPSKTPVRPRAPR 360
VSPSKTPVR R+PR
Sbjct: 348 VSPSKTPVRSRSPR 361
>gi|218198344|gb|EEC80771.1| hypothetical protein OsI_23281 [Oryza sativa Indica Group]
Length = 372
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 168/307 (54%), Positives = 207/307 (67%), Gaps = 34/307 (11%)
Query: 87 EMRDLVDMLSKLNPMAAEFVP------PSLANGQIFNFNPAFFGPNGFGYTNNFI----- 135
+ R L ++ KLNP A EFVP ++ P F P Y+ + +
Sbjct: 63 DARKLEELFKKLNPSAEEFVPLARRRGGGDGARRLSADAPVFVSPAIDFYSQHPVQQPPP 122
Query: 136 ---------------MHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRT 180
+ + +TNG RR+R+ ++QG+RRM R +++ +RRT
Sbjct: 123 IQVLPVVVGGGGGAGLDSSSDGSTNGQ-PNRRRRSSFNQGRRRMGGRPRRTDREDSVRRT 181
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGT 240
VYVSDIDQ VTE++LA +F CGQVVDCRICGDPNSVLRFAF+EF D+ GARAAL+L GT
Sbjct: 182 VYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVLRFAFIEFADDVGARAALTLGGT 241
Query: 241 MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVC 300
+LG+YPVRVLPSKTAI PVNP FLPR+EDE+EM SRT+YCTNIDK V + +K FFE +C
Sbjct: 242 VLGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDAVKSFFEGMC 301
Query: 301 GEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIR-------VSPSKTP 353
GEV RLRLLGDY HST IAFVEF A+SAI AL+CSG VLG+LP+R VSPSKTP
Sbjct: 302 GEVARLRLLGDYVHSTCIAFVEFVQADSAILALSCSGMVLGALPVRQANTPYAVSPSKTP 361
Query: 354 VRPRAPR 360
VRPR+PR
Sbjct: 362 VRPRSPR 368
>gi|414868267|tpg|DAA46824.1| TPA: hypothetical protein ZEAMMB73_802900 [Zea mays]
Length = 328
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 143/172 (83%), Positives = 156/172 (90%)
Query: 189 QVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVR 248
+VTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTD+EGARAAL+L+G MLG+YPV
Sbjct: 152 EVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDDEGARAALNLSGNMLGYYPVN 211
Query: 249 VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 308
VLPSKTAIAPVN TFLPRS+DEREMC+RTIYCTNIDK V Q D+KLFFES+CGEV RLRL
Sbjct: 212 VLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKMVAQADLKLFFESICGEVFRLRL 271
Query: 309 LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
LGDY HSTRIAFVEF MAESA AALN SG VLGSLPIRV+PSKTPVRPR PR
Sbjct: 272 LGDYHHSTRIAFVEFVMAESATAALNSSGVVLGSLPIRVNPSKTPVRPRDPR 323
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID+ V + L F + CG+V R+ GD + R AFVEF E A
Sbjct: 233 EREMCARTIYCTNIDKMVAQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESA 292
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV PSKT + P +P
Sbjct: 293 TAALNSSGVVLGSLPIRVNPSKTPVRPRDP 322
>gi|212274823|ref|NP_001130545.1| uncharacterized protein LOC100191644 [Zea mays]
gi|194689440|gb|ACF78804.1| unknown [Zea mays]
gi|224030729|gb|ACN34440.1| unknown [Zea mays]
gi|413926010|gb|AFW65942.1| CID11 [Zea mays]
Length = 379
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 168/312 (53%), Positives = 208/312 (66%), Gaps = 38/312 (12%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSL-------------------ANGQIFNFNPAFFGPNG 127
+++ L +++SKLNP A EFVP S A+ +F ++G G
Sbjct: 64 DLKKLENLMSKLNPCAQEFVPSSRRTAPAAVAAAKPAGGRVLSADAPVFVSAAEYYGAAG 123
Query: 128 ------------------FGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTS 169
G ++ ++G + H RR+RN ++ G+RR
Sbjct: 124 GHLEIGGGGGGGKVVVGGGGRDSSSDGSSNGGGGGSRHQPNRRRRNSFNHGRRRGAGGRP 183
Query: 170 NAQQDE-VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDE 228
E +RRTVYVSDIDQ VTE++LA +F CG+VVDCRICGDP+SVLRFAF+EF+D+
Sbjct: 184 RRGDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGRVVDCRICGDPHSVLRFAFIEFSDD 243
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
GARAAL+LAGT+LG YPVRVLPSKTAI PVNP FLP+++DE+EM SRT+YCTNIDKKVT
Sbjct: 244 GGARAALTLAGTILGCYPVRVLPSKTAILPVNPKFLPQTDDEKEMVSRTVYCTNIDKKVT 303
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVS 348
+ D+K FF+ CG+V RLRLL D HST IAFVEFA AESAI ALN SG VLGSLPIRVS
Sbjct: 304 EEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESAIMALNFSGMVLGSLPIRVS 363
Query: 349 PSKTPVRPRAPR 360
PSKTPVRPR+PR
Sbjct: 364 PSKTPVRPRSPR 375
>gi|195626410|gb|ACG35035.1| CID11 [Zea mays]
Length = 378
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/310 (53%), Positives = 207/310 (66%), Gaps = 36/310 (11%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPS------------LANGQIFNFNPAFFGPNGFGY---- 130
+++ L +++SKLNP A EFVP S A G++ + + F Y
Sbjct: 65 DLKKLENLMSKLNPSAQEFVPSSRRTAPAAVAAAKPAGGRVLSADAPVFVSAAEYYGAAG 124
Query: 131 -------------------TNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNA 171
++ ++G + H RR+RN ++ G+RR
Sbjct: 125 GHLEIGGGGGKVVVGGGGRDSSSDGSSNGGGGGSRHQPNRRRRNSFNHGRRRGAGGRPRR 184
Query: 172 QQDE-VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
E +RRTVYVSDIDQ VTE++LA +F CG+VVDCRICGDP+SVLRFAF+EF+D+ G
Sbjct: 185 GDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGRVVDCRICGDPHSVLRFAFIEFSDDAG 244
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
ARAAL+LAGT+LG YPVRVLPSKTAI PVNP FLP+++DE+EM SRT+YCTNIDKKVT+
Sbjct: 245 ARAALTLAGTILGCYPVRVLPSKTAILPVNPKFLPQTDDEKEMVSRTVYCTNIDKKVTEE 304
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 350
D+K FF+ CG+V RLRLL D HST IAFVEFA AESAI ALN SG VLGSLPIRVSPS
Sbjct: 305 DVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESAIMALNFSGMVLGSLPIRVSPS 364
Query: 351 KTPVRPRAPR 360
KTPVRPR+PR
Sbjct: 365 KTPVRPRSPR 374
>gi|147818437|emb|CAN60729.1| hypothetical protein VITISV_013180 [Vitis vinifera]
Length = 642
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 135/176 (76%), Positives = 156/176 (88%)
Query: 153 KRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 212
+RN Y+QG+RR++ R AQ+++ IRRTVYVSDIDQ VTEE+LA LF +CGQVVDCR+CG
Sbjct: 324 RRNNYNQGRRRLSGRAFRAQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQVVDCRVCG 383
Query: 213 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE 272
DP+SVLRFAFVEF DE GARAAL+L GTMLG+YPVRVLPSKTAI PVNPTFLPRSEDERE
Sbjct: 384 DPHSVLRFAFVEFADEHGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDERE 443
Query: 273 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAES 328
MC+RT+YCTNIDKKV+Q ++K FFE CGEV RLRLLGD+ HSTRIAFVEFAM +S
Sbjct: 444 MCARTVYCTNIDKKVSQAEVKNFFERACGEVSRLRLLGDHVHSTRIAFVEFAMGQS 499
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y ++ID+ VT+ + F S CG+V R+ GD R AFVEFA A AALN
Sbjct: 350 RTVYVSDIDQHVTEERLAALFSS-CGQVVDCRVCGDPHSVLRFAFVEFADEHGARAALNL 408
Query: 336 SGAVLGSLPIRVSPSKTPVRPRAP 359
G +LG P+RV PSKT + P P
Sbjct: 409 GGTMLGYYPVRVLPSKTAILPVNP 432
>gi|222635710|gb|EEE65842.1| hypothetical protein OsJ_21610 [Oryza sativa Japonica Group]
Length = 367
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 158/301 (52%), Positives = 196/301 (65%), Gaps = 33/301 (10%)
Query: 87 EMRDLVDMLSKLNPMAAEFVP------PSLANGQIFNFNPAFFGPNGFGYTNNFI----- 135
+ R L ++ KLNP A EFVP ++ P F P Y+ + +
Sbjct: 60 DARKLEELFKKLNPSAEEFVPLARRRGGGDGARRLSADAPVFVSPAIDFYSQHPVQQPPP 119
Query: 136 ---------------MHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRT 180
+ + +TNG RR+R+ ++QG+RRM R +++ +RRT
Sbjct: 120 IQVLPVVVGGGGGAGLDSSSDGSTNGQ-PNRRRRSSFNQGRRRMGGRPRRTDREDSVRRT 178
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGT 240
VYVSDIDQ VTE++LA +F CGQVVDCRICGDPNSVLRFAF+EF D+ GARAAL+L GT
Sbjct: 179 VYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVLRFAFIEFADDVGARAALTLGGT 238
Query: 241 MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVC 300
+LG+YPVRVLPSKTAI PVNP FLPR+EDE+EM SRT+YCTNIDK V + +K FFE +C
Sbjct: 239 VLGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDAVKSFFEGMC 298
Query: 301 GEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
GEV RLRLLGDY HST IAFVEF A+SAI AL+CSG VLG+LP PV+ P
Sbjct: 299 GEVARLRLLGDYVHSTCIAFVEFVQADSAILALSCSGMVLGALP------GEPVKDTGPA 352
Query: 361 P 361
P
Sbjct: 353 P 353
>gi|413921445|gb|AFW61377.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 315
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 151/247 (61%), Positives = 173/247 (70%), Gaps = 25/247 (10%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLAN------GQIFNFNPAFFGPNGFGY---TNNFIMH 137
EMRDL D+LSKLNPMA EFVPPSLA+ PA P +G+ F +
Sbjct: 39 EMRDLEDLLSKLNPMAEEFVPPSLASPISGAGAGHGALTPAPLSPAAYGFYPVNAGFAVA 98
Query: 138 TDG-------TANTNGHTTTRRKRNGYSQGKRR---------MNCRTSNAQQDEVIRRTV 181
+ G A + H K++G N RTS AQ+DE IRRTV
Sbjct: 99 SPGHRGVVSFPAVADAHAGRGMKKDGAGGFGGHGHGHPGRRRTNSRTSMAQRDEAIRRTV 158
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
YVSDID QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+
Sbjct: 159 YVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTV 218
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCG 301
LG+YPV+VLPSKTAIAPVN TFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CG
Sbjct: 219 LGYYPVKVLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICG 278
Query: 302 EVQRLRL 308
EV R L
Sbjct: 279 EVGRSLL 285
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 331
E RT+Y ++ID +VT+ ++ F + CG+V R+ GD R AF+EF E A A
Sbjct: 152 EAIRRTVYVSDIDHQVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEFTDEEGARA 210
Query: 332 ALNCSGAVLGSLPIRVSPSKTPVRP 356
ALN SG VLG P++V PSKT + P
Sbjct: 211 ALNLSGTVLGYYPVKVLPSKTAIAP 235
>gi|224106628|ref|XP_002333653.1| predicted protein [Populus trichocarpa]
gi|222837945|gb|EEE76310.1| predicted protein [Populus trichocarpa]
Length = 158
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 128/156 (82%), Positives = 145/156 (92%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
AQQ+E++RRTVYVSDIDQQVTEEQLA LF+ CGQVVDCRICGDP SVLRFAF+EFTDEEG
Sbjct: 2 AQQEEIVRRTVYVSDIDQQVTEEQLAALFINCGQVVDCRICGDPKSVLRFAFIEFTDEEG 61
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
A+AALSL+GTMLG+YPV+VLPSKTAIAPVNPTFLPR++DEREMC+RTIYCTNID+ +TQ
Sbjct: 62 AQAALSLSGTMLGYYPVKVLPSKTAIAPVNPTFLPRNDDEREMCARTIYCTNIDRNLTQA 121
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 326
+IKLFFES+CGEV LRLLGD+ H TRIAFVEF M
Sbjct: 122 NIKLFFESLCGEVYHLRLLGDHHHPTRIAFVEFVMV 157
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 270 EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESA 329
+ E+ RT+Y ++ID++VT+ + F + CG+V R+ GD + R AF+EF E A
Sbjct: 4 QEEIVRRTVYVSDIDQQVTEEQLAALFIN-CGQVVDCRICGDPKSVLRFAFIEFTDEEGA 62
Query: 330 IAALNCSGAVLGSLPIRVSPSKTPVRPRAP 359
AAL+ SG +LG P++V PSKT + P P
Sbjct: 63 QAALSLSGTMLGYYPVKVLPSKTAIAPVNP 92
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFT 226
N + E+ RT+Y ++ID+ +T+ + F + CG+V R+ GD + R AFVEF
Sbjct: 98 NDDEREMCARTIYCTNIDRNLTQANIKLFFESLCGEVYHLRLLGDHHHPTRIAFVEFV 155
>gi|53793069|dbj|BAD54280.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|53793076|dbj|BAD54286.1| putative RNA-binding protein [Oryza sativa Japonica Group]
Length = 206
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 133/198 (67%), Positives = 155/198 (78%), Gaps = 6/198 (3%)
Query: 164 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFV 223
M R +++ +RRTVYVSDIDQ VTE++LA +F CGQVVDCRICGDPNSVLRFAF+
Sbjct: 1 MGGRPRRTDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVLRFAFI 60
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 283
EF D+ GARAAL+L GT+LG+YPVRVLPSKTAI PVNP FLPR+EDE+EM SRT+YCTNI
Sbjct: 61 EFADDVGARAALTLGGTVLGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNI 120
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSL 343
DK V + +K FFE +CGEV RLRLLGDY HST IAFVEF A+SAI AL+CSG VLG+L
Sbjct: 121 DKNVPEDAVKSFFEGMCGEVARLRLLGDYVHSTCIAFVEFVQADSAILALSCSGMVLGAL 180
Query: 344 PIRVSPSKTPVRPRAPRP 361
P PV+ P P
Sbjct: 181 P------GEPVKDTGPAP 192
>gi|413941690|gb|AFW74339.1| hypothetical protein ZEAMMB73_453710 [Zea mays]
Length = 286
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/219 (63%), Positives = 158/219 (72%), Gaps = 20/219 (9%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYT---NNFIMHTDGTAN 143
EMRDL D+LSKLNPMA EFVPPSLA+ PA P +G+ F + + G
Sbjct: 35 EMRDLEDLLSKLNPMAEEFVPPSLASPA--ALTPAPLSPAAYGFYPAGAGFAVASPGHGG 92
Query: 144 TNGHTTTRRKR--------------NGYSQ-GKRRMNCRTSNAQQDEVIRRTVYVSDIDQ 188
G +G+ +RR N RTS AQ+DE+IRRTVYVSDID
Sbjct: 93 VVGFPAVADAHAARGRKKGGAGGGFSGHGHPARRRTNSRTSMAQRDEIIRRTVYVSDIDH 152
Query: 189 QVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVR 248
QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+LG+YPVR
Sbjct: 153 QVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPVR 212
Query: 249 VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
VLPSKTAIAPVNPTFLPRS+DEREMC+RTIYCTNIDKKV
Sbjct: 213 VLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKV 251
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 331
E+ RT+Y ++ID +VT+ ++ F + CG+V R+ GD R AF+EF E A A
Sbjct: 139 EIIRRTVYVSDIDHQVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEFTDEEGARA 197
Query: 332 ALNCSGAVLGSLPIRVSPSKTPVRPRAP 359
ALN SG VLG P+RV PSKT + P P
Sbjct: 198 ALNLSGTVLGYYPVRVLPSKTAIAPVNP 225
>gi|326508995|dbj|BAJ86890.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 169
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/165 (76%), Positives = 142/165 (86%)
Query: 196 ATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTA 255
A +F CGQVVDCRICGDPNSV+RFAF+EF D+ GARAAL+L GT+LGFYPVRVLPSKTA
Sbjct: 1 AEVFSNCGQVVDCRICGDPNSVMRFAFIEFADDVGARAALALGGTVLGFYPVRVLPSKTA 60
Query: 256 IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 315
I PVNP FLPR+EDE+EM SRT+YCTNIDK V + +K FFE +CGEV RLRLLGDY H+
Sbjct: 61 ILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDVVKNFFEGICGEVARLRLLGDYVHA 120
Query: 316 TRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
T IAFVEF AE AI ALNCSG +LGSLP+RVSPSKTPVRPR+PR
Sbjct: 121 TCIAFVEFVEAEGAILALNCSGMLLGSLPVRVSPSKTPVRPRSPR 165
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID+ V E+ + F CG+V R+ GD AFVEF + EGA
Sbjct: 75 EKEMVSRTVYCTNIDKNVPEDVVKNFFEGICGEVARLRLLGDYVHATCIAFVEFVEAEGA 134
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AL+ +G +LG PVRV PSKT + P +P
Sbjct: 135 ILALNCSGMLLGSLPVRVSPSKTPVRPRSP 164
>gi|159464635|ref|XP_001690547.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158280047|gb|EDP05806.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 464
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 126/204 (61%), Positives = 153/204 (75%)
Query: 152 RKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 211
++ +G G++ + +E IRRTVY+S +D +TEE LA F CG+++DCRIC
Sbjct: 168 QQHSGRGPGQQAQKKKRPQKGLEENIRRTVYISYVDCSLTEENLAAFFSDCGRILDCRIC 227
Query: 212 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
GDPNS +RFAF+EF D E A AL G++LG P+RVLPSKTAI PVN +PRS DE
Sbjct: 228 GDPNSAMRFAFIEFMDVECAAKALEKTGSVLGNSPLRVLPSKTAIMPVNQELMPRSADEV 287
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 331
E CSRT+Y NIDKKV + D+K FFES+CG+V R+RLLGDY HSTRIAFVEF AE A+A
Sbjct: 288 ERCSRTVYAANIDKKVDKNDVKAFFESLCGKVSRIRLLGDYAHSTRIAFVEFHHAEGALA 347
Query: 332 ALNCSGAVLGSLPIRVSPSKTPVR 355
ALNCSGA+LGSLPIRVSPSKTPVR
Sbjct: 348 ALNCSGALLGSLPIRVSPSKTPVR 371
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y + +D +T+ ++ FF S CG + R+ GD + R AF+EF E A AL
Sbjct: 195 RTVYISYVDCSLTEENLAAFF-SDCGRILDCRICGDPNSAMRFAFIEFMDVECAAKALEK 253
Query: 336 SGAVLGSLPIRVSPSKTPVRP 356
+G+VLG+ P+RV PSKT + P
Sbjct: 254 TGSVLGNSPLRVLPSKTAIMP 274
>gi|302830029|ref|XP_002946581.1| hypothetical protein VOLCADRAFT_56092 [Volvox carteri f.
nagariensis]
gi|300268327|gb|EFJ52508.1| hypothetical protein VOLCADRAFT_56092 [Volvox carteri f.
nagariensis]
Length = 238
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 122/182 (67%), Positives = 145/182 (79%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
+E I+RTVY+S +D +TEE LA F CG++VDCRICGDPNS +RFAF+EF D E A
Sbjct: 12 EENIKRTVYISYVDCTLTEENLAAFFSDCGRIVDCRICGDPNSAMRFAFIEFADVEFATK 71
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
AL G++LG P+RVLPSKTAI PVN +PRS DE E CSRT+Y NIDKKV + D++
Sbjct: 72 ALEKTGSVLGKSPLRVLPSKTAIMPVNQELMPRSPDEVERCSRTVYAANIDKKVDKNDVR 131
Query: 294 LFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTP 353
FFES+CG+V R+RLLGDY HSTRIAFVEF AE A+AALNCSGA+LGSLPIRVSPSKTP
Sbjct: 132 AFFESLCGKVSRIRLLGDYAHSTRIAFVEFQHAEGALAALNCSGALLGSLPIRVSPSKTP 191
Query: 354 VR 355
V+
Sbjct: 192 VK 193
>gi|413916285|gb|AFW56217.1| hypothetical protein ZEAMMB73_723080 [Zea mays]
Length = 246
Score = 257 bits (656), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 120/143 (83%), Positives = 130/143 (90%), Gaps = 4/143 (2%)
Query: 187 DQQ----VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTML 242
DQQ VTEE LA LF+ CGQVVDC +CGDPNSVLRF F+EFTDEEGARAAL+L+GTML
Sbjct: 16 DQQIVFKVTEENLAALFINCGQVVDCHMCGDPNSVLRFTFIEFTDEEGARAALNLSGTML 75
Query: 243 GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGE 302
G+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CGE
Sbjct: 76 GYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGE 135
Query: 303 VQRLRLLGDYQHSTRIAFVEFAM 325
V RLRLLGDY HSTRIAFVEF M
Sbjct: 136 VFRLRLLGDYHHSTRIAFVEFVM 158
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPI 345
KVT+ ++ F + CG+V + GD R F+EF E A AALN SG +LG P+
Sbjct: 22 KVTEENLAALFIN-CGQVVDCHMCGDPNSVLRFTFIEFTDEEGARAALNLSGTMLGYYPV 80
Query: 346 RVSPSKTPVRPRAP 359
RV PSKT + P P
Sbjct: 81 RVLPSKTAIAPVNP 94
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFT 226
+ E+ RT+Y ++ID++VT+ L F + CG+V R+ GD + R AFVEF
Sbjct: 103 EREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFV 157
>gi|222641306|gb|EEE69438.1| hypothetical protein OsJ_28831 [Oryza sativa Japonica Group]
Length = 353
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 128/219 (58%), Positives = 153/219 (69%), Gaps = 3/219 (1%)
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRR-MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLAT 197
+G ++T H + R RN QG+ + R AQ++E +RRT++VSDID VTE+ LA
Sbjct: 120 NGISSTR-HWSRRGSRNFSRQGRSAPFSSRVRRAQKEEFVRRTIFVSDIDHTVTEDMLAE 178
Query: 198 LFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
LF + C VVDCRICGD +S LRFAF+EF DE A AAL L G +LG P+RV PSKTAI
Sbjct: 179 LFGSYCSVVVDCRICGDHSSGLRFAFIEFQDESDAYAALDLDGYVLGICPLRVSPSKTAI 238
Query: 257 APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHST 316
PVNP+FLP+SE EREMCSRTIYCTNIDK V D+K F E G+V RL+LLGD H T
Sbjct: 239 MPVNPSFLPQSEAEREMCSRTIYCTNIDKSVNVTDLKYFCEEHFGQVFRLKLLGDDGHPT 298
Query: 317 RIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
RIAF+EFA + AI ALN SG PIRV PSKTP+R
Sbjct: 299 RIAFIEFAEVDGAINALNSSGIFASGQPIRVCPSKTPIR 337
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 51/94 (54%)
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
R + E RTI+ ++ID VT+ + F S C V R+ GD+ R AF+EF
Sbjct: 150 RRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRICGDHSSGLRFAFIEFQD 209
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAP 359
A AAL+ G VLG P+RVSPSKT + P P
Sbjct: 210 ESDAYAALDLDGYVLGICPLRVSPSKTAIMPVNP 243
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTC----GQVVDCRICGDPNSVLRFAFVEFTDE 228
+ E+ RT+Y ++ID+ V L C GQV ++ GD R AF+EF +
Sbjct: 252 EREMCSRTIYCTNIDKSVNVTDLKYF---CEEHFGQVFRLKLLGDDGHPTRIAFIEFAEV 308
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPV 259
+GA AL+ +G P+RV PSKT I V
Sbjct: 309 DGAINALNSSGIFASGQPIRVCPSKTPIRSV 339
>gi|218201903|gb|EEC84330.1| hypothetical protein OsI_30837 [Oryza sativa Indica Group]
Length = 353
Score = 241 bits (616), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 128/219 (58%), Positives = 153/219 (69%), Gaps = 3/219 (1%)
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRR-MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLAT 197
+G ++T H + R RN QG+ + R AQ++E +RRT++VSDID VTE+ LA
Sbjct: 120 NGISSTR-HWSRRGSRNFSRQGRSAPFSSRVRRAQKEEFVRRTIFVSDIDHTVTEDMLAE 178
Query: 198 LFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
LF + C VVDCRICGD +S LRFAF+EF DE A AAL L G +LG P+RV PSKTAI
Sbjct: 179 LFGSYCSVVVDCRICGDHSSGLRFAFIEFQDESDAYAALDLDGYVLGICPLRVSPSKTAI 238
Query: 257 APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHST 316
PVNP+FLP+SE EREMCSRTIYCTNIDK V D+K F E G+V RL+LLGD H T
Sbjct: 239 MPVNPSFLPQSEAEREMCSRTIYCTNIDKSVNVTDLKYFCEEHFGQVFRLKLLGDDGHPT 298
Query: 317 RIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
RIAF+EFA + AI ALN SG PIRV PSKTP+R
Sbjct: 299 RIAFIEFAEVDGAINALNSSGIFASGQPIRVCPSKTPIR 337
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 51/94 (54%)
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
R + E RTI+ ++ID VT+ + F S C V R+ GD+ R AF+EF
Sbjct: 150 RRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRICGDHSSGLRFAFIEFQD 209
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAP 359
A AAL+ G VLG P+RVSPSKT + P P
Sbjct: 210 ESDAYAALDLDGYVLGICPLRVSPSKTAIMPVNP 243
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTC----GQVVDCRICGDPNSVLRFAFVEFTDE 228
+ E+ RT+Y ++ID+ V L C GQV ++ GD R AF+EF +
Sbjct: 252 EREMCSRTIYCTNIDKSVNVTDLKYF---CEEHFGQVFRLKLLGDDGHPTRIAFIEFAEV 308
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPV 259
+GA AL+ +G P+RV PSKT I V
Sbjct: 309 DGAINALNSSGIFASGQPIRVCPSKTPIRSV 339
>gi|307105908|gb|EFN54155.1| hypothetical protein CHLNCDRAFT_13101, partial [Chlorella
variabilis]
Length = 187
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 111/187 (59%), Positives = 144/187 (77%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDE 228
S+ + +E +R TVY+SDI VTE QLA F CGQ+VDCR+CGDPNS +RFAF+EF E
Sbjct: 1 SSRRNEEKVRCTVYISDISDTVTEAQLAAFFQDCGQLVDCRVCGDPNSSMRFAFIEFMQE 60
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
+ A+ AL +G MLG +P+RV PSKTAI PVN T+LPRS +ERE+ +RT++ NID+ V
Sbjct: 61 DSAQQALGKSGAMLGDFPIRVSPSKTAIVPVNNTYLPRSTEERELVARTVFVGNIDRVVE 120
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVS 348
+ + FF+++CG V ++RLLGD QHS +IAF+EF AESA AAL SGA+LG+LP+RVS
Sbjct: 121 REQLSEFFQNLCGPVSKIRLLGDSQHSAKIAFIEFVTAESARAALKLSGALLGTLPLRVS 180
Query: 349 PSKTPVR 355
PSKTPVR
Sbjct: 181 PSKTPVR 187
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
R +E+ C T+Y ++I VT+ + FF+ CG++ R+ GD S R AF+EF
Sbjct: 3 RRNEEKVRC--TVYISDISDTVTEAQLAAFFQD-CGQLVDCRVCGDPNSSMRFAFIEFMQ 59
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKTPVRP 356
+SA AL SGA+LG PIRVSPSKT + P
Sbjct: 60 EDSAQQALGKSGAMLGDFPIRVSPSKTAIVP 90
>gi|388517685|gb|AFK46904.1| unknown [Lotus japonicus]
Length = 124
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 106/124 (85%), Positives = 117/124 (94%)
Query: 241 MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVC 300
MLG+YP+RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK+TQ D+K FFES+C
Sbjct: 1 MLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKLTQSDVKNFFESIC 60
Query: 301 GEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
GEVQRLRLLGD+ HSTRIAFVEF +AESAIAAL+CSG +LGSLPIRVSPSKTPVR R+PR
Sbjct: 61 GEVQRLRLLGDHNHSTRIAFVEFKVAESAIAALSCSGVILGSLPIRVSPSKTPVRSRSPR 120
Query: 361 PPLH 364
P+H
Sbjct: 121 SPMH 124
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID+++T+ + F + CG+V R+ GD N R AFVEF E A
Sbjct: 30 EREMCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESA 89
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AALS +G +LG P+RV PSKT + +P
Sbjct: 90 IAALSCSGVILGSLPIRVSPSKTPVRSRSP 119
>gi|384248219|gb|EIE21704.1| hypothetical protein COCSUDRAFT_56895 [Coccomyxa subellipsoidea
C-169]
Length = 231
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/261 (45%), Positives = 159/261 (60%), Gaps = 39/261 (14%)
Query: 97 KLNPMAAEFVPPSLANGQIFNFNPAFFGPNGF--GYTNNFIMHTDGTANTNGHTTTRRKR 154
+LNP A EFVPP NGF + + D +A + HT R+ R
Sbjct: 5 RLNPGAKEFVPPG----------------NGFQVSWQSYSFQKQDVSAPGSLHTFQRQSR 48
Query: 155 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 214
R+ VTE LA +F G++VDCR+CGDP
Sbjct: 49 PR---------------------RKAALQKQFGGNVTEAALADVFKHSGKIVDCRVCGDP 87
Query: 215 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC 274
NS +RFAF+EF DEE + A+ L GTMLG +P+RV+PSKTAI PVN +FLPR+++E E C
Sbjct: 88 NSAMRFAFIEFADEEAIQRAIKLNGTMLGKFPIRVMPSKTAIVPVNNSFLPRTQEELERC 147
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN 334
+RT+Y NIDKKV + ++++FF+++CG V ++RLL DY H + IAFVEFA +SA AL+
Sbjct: 148 ARTVYIANIDKKVDREEVRVFFQTLCGPVTKIRLLSDYNHVSSIAFVEFADFKSARKALD 207
Query: 335 CSGAVLGSLPIRVSPSKTPVR 355
CSGA+LGSLPIRV+PSK PVR
Sbjct: 208 CSGALLGSLPIRVTPSKAPVR 228
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 301 GEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRP 356
G++ R+ GD + R AF+EFA E+ A+ +G +LG PIRV PSKT + P
Sbjct: 76 GKIVDCRVCGDPNSAMRFAFIEFADEEAIQRAIKLNGTMLGKFPIRVMPSKTAIVP 131
>gi|116789825|gb|ABK25401.1| unknown [Picea sitchensis]
Length = 124
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/124 (83%), Positives = 115/124 (92%)
Query: 241 MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVC 300
MLG+YPVRVLPSKTAI PVNPTFLPRSEDEREMC+RTIYCTNIDKKV+Q ++++FFES+C
Sbjct: 1 MLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCARTIYCTNIDKKVSQVEVRMFFESLC 60
Query: 301 GEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
GEV RLRLLGD+ HSTRIAFVEF MAESAI ALNCSGA++GSLPIRVSPSKTPVRPR P
Sbjct: 61 GEVSRLRLLGDHVHSTRIAFVEFVMAESAILALNCSGAIVGSLPIRVSPSKTPVRPRIPH 120
Query: 361 PPLH 364
P +H
Sbjct: 121 PTMH 124
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++V++ ++ F + CG+V R+ GD R AFVEF E A
Sbjct: 30 EREMCARTIYCTNIDKKVSQVEVRMFFESLCGEVSRLRLLGDHVHSTRIAFVEFVMAESA 89
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AL+ +G ++G P+RV PSKT + P P
Sbjct: 90 ILALNCSGAIVGSLPIRVSPSKTPVRPRIP 119
>gi|384245723|gb|EIE19216.1| hypothetical protein COCSUDRAFT_38408 [Coccomyxa subellipsoidea
C-169]
Length = 200
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 131/174 (75%)
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
+ S Q+VTE LA +F G++VDCR+CGDPNS +RFAF+EF DE + A+ L G
Sbjct: 24 WQSPFHQKVTEASLADVFKDSGKIVDCRVCGDPNSAMRFAFIEFADERAVQQAIKLNGAK 83
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCG 301
LG YP+RV+PSKTAI PVN +FLPR++ E E C+RT+Y NIDK+V + D++ FFE++CG
Sbjct: 84 LGKYPIRVMPSKTAIVPVNTSFLPRTQKELECCARTVYVANIDKRVDREDVRQFFETLCG 143
Query: 302 EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
V+++RLL DY + IAFVEFA +SA AL+CSGA+LG LPIRV+PSK PVR
Sbjct: 144 PVKKIRLLSDYNKVSSIAFVEFAGFDSARKALDCSGALLGMLPIRVTPSKAPVR 197
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
++ E RTVYV++ID++V E + F T CG V R+ D N V AFVEF +
Sbjct: 111 KELECCARTVYVANIDKRVDREDVRQFFETLCGPVKKIRLLSDYNKVSSIAFVEFAGFDS 170
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAI 256
AR AL +G +LG P+RV PSK +
Sbjct: 171 ARKALDCSGALLGMLPIRVTPSKAPV 196
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 285 KKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLP 344
+KVT+ + F+ G++ R+ GD + R AF+EFA + A+ +GA LG P
Sbjct: 30 QKVTEASLADVFKD-SGKIVDCRVCGDPNSAMRFAFIEFADERAVQQAIKLNGAKLGKYP 88
Query: 345 IRVSPSKTPVRP 356
IRV PSKT + P
Sbjct: 89 IRVMPSKTAIVP 100
>gi|413954119|gb|AFW86768.1| hypothetical protein ZEAMMB73_327506 [Zea mays]
Length = 219
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 98/138 (71%), Positives = 119/138 (86%), Gaps = 3/138 (2%)
Query: 189 QVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVR 248
+VTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+LG+YP+
Sbjct: 39 EVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPIN 98
Query: 249 VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLR- 307
VL SKTAIAPVN TFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CGE++ R
Sbjct: 99 VLLSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGELKVCRN 158
Query: 308 --LLGDYQHSTRIAFVEF 323
+ D + + + F++F
Sbjct: 159 GTIKIDLETNKIMDFIKF 176
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPI 345
+VT+ ++ F + CG+V R+ GD R AF+EF E A AALN SG VLG PI
Sbjct: 39 EVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPI 97
Query: 346 RVSPSKTPVRP 356
V SKT + P
Sbjct: 98 NVLLSKTAIAP 108
>gi|413952071|gb|AFW84720.1| hypothetical protein ZEAMMB73_482719 [Zea mays]
Length = 625
Score = 211 bits (536), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 93/115 (80%), Positives = 106/115 (92%)
Query: 188 QQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV 247
QVTEE LA LF+ GQVVDC +CGDPNSVL+FAF+EFTDEEGAR AL+L+GT+L +YPV
Sbjct: 308 HQVTEENLAALFINYGQVVDCHMCGDPNSVLQFAFIEFTDEEGARVALNLSGTVLRYYPV 367
Query: 248 RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGE 302
RVLPSKTAIAPVNPTF+PRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CGE
Sbjct: 368 RVLPSKTAIAPVNPTFVPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGE 422
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPI 345
+VT+ ++ F + G+V + GD + AF+EF E A ALN SG VL P+
Sbjct: 309 QVTEENLAALFINY-GQVVDCHMCGDPNSVLQFAFIEFTDEEGARVALNLSGTVLRYYPV 367
Query: 346 RVSPSKTPVRPRAP 359
RV PSKT + P P
Sbjct: 368 RVLPSKTAIAPVNP 381
>gi|413943210|gb|AFW75859.1| putative ubiquitin-conjugating enzyme family [Zea mays]
Length = 699
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/141 (69%), Positives = 108/141 (76%), Gaps = 20/141 (14%)
Query: 185 DIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGF 244
D+ QVTEE LA LF+ CGQVVDCR+CGDPNSVLRF F+EFTDEEGARAAL+L+GT+L +
Sbjct: 482 DLFCQVTEENLAALFINCGQVVDCRMCGDPNSVLRFTFIEFTDEEGARAALNLSGTVLRY 541
Query: 245 YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQ 304
YPV VLPSKT IAPVNPTFLPR VTQ D+KLFFES+CGEV
Sbjct: 542 YPVSVLPSKTVIAPVNPTFLPR--------------------VTQADLKLFFESICGEVF 581
Query: 305 RLRLLGDYQHSTRIAFVEFAM 325
RLRLLGDY HSTRIAFVEF M
Sbjct: 582 RLRLLGDYHHSTRIAFVEFVM 602
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPI 345
+VT+ ++ F + CG+V R+ GD R F+EF E A AALN SG VL P+
Sbjct: 486 QVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFTFIEFTDEEGARAALNLSGTVLRYYPV 544
Query: 346 RVSPSKTPVRPRAP 359
V PSKT + P P
Sbjct: 545 SVLPSKTVIAPVNP 558
>gi|414884994|tpg|DAA61008.1| TPA: hypothetical protein ZEAMMB73_630517 [Zea mays]
Length = 295
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/191 (50%), Positives = 126/191 (65%), Gaps = 2/191 (1%)
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVE 224
++ +Q DE ++RT++V ID VTE+ LA LF G VVDCRICGDP S LRF FVE
Sbjct: 96 KSHRSQWDETVKRTIFVKYIDHNVTEDILACLFQLFGTVVDCRICGDPTSDDGLRFGFVE 155
Query: 225 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 284
E+ A A+L L G ++ P+ V S+TAI P+NP FLP+SE E E C RTIYCTNI
Sbjct: 156 LQHEDEAIASLDLDGYIISVSPLSVSRSRTAICPINPKFLPQSEAEWETCLRTIYCTNIS 215
Query: 285 KKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLP 344
K VT +++ F E+ G+V R+RLL + + ST IAF+EF AIAAL G + +P
Sbjct: 216 KNVTSSNLRSFCEAYFGKVCRVRLLDNKERSTNIAFIEFVEVYGAIAALGSGGIYVDGVP 275
Query: 345 IRVSPSKTPVR 355
IR+ PSK+P+R
Sbjct: 276 IRMCPSKSPIR 286
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 261 PTFLPRSEDER-EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTR 317
PTF + E RTI+ ID VT+ + F+ + G V R+ GD R
Sbjct: 92 PTFFKSHRSQWDETVKRTIFVKYIDHNVTEDILACLFQ-LFGTVVDCRICGDPTSDDGLR 150
Query: 318 IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
FVE + AIA+L+ G ++ P+ VS S+T + P P+
Sbjct: 151 FGFVELQHEDEAIASLDLDGYIISVSPLSVSRSRTAICPINPK 193
>gi|414884567|tpg|DAA60581.1| TPA: hypothetical protein ZEAMMB73_957971 [Zea mays]
Length = 296
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 117/182 (64%), Gaps = 18/182 (9%)
Query: 132 NNFIMHTDGTANTNGH----TTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSD-- 185
N + + DG N H + +N YS G+ ++C VSD
Sbjct: 65 NGYYVAYDGWGNREDHGHHFSIKLILKNVYSAGQMGVSCLGLG------------VSDRY 112
Query: 186 IDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFY 245
+D Q L VVDCR+CGDPNSVLRFAF+EF DEEGARAA +L+ T+LG+Y
Sbjct: 113 LDDQDCILSLVFHLHISPHVVDCRMCGDPNSVLRFAFIEFADEEGARAAPNLSRTVLGYY 172
Query: 246 PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQR 305
PV VLPSKTAIAPVN TFLPRS+DEREMC+ TIYCTNIDKKVTQ D+ LFFES+CGE++
Sbjct: 173 PVNVLPSKTAIAPVNETFLPRSDDEREMCASTIYCTNIDKKVTQADLNLFFESICGELKV 232
Query: 306 LR 307
R
Sbjct: 233 CR 234
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 33/63 (52%)
Query: 294 LFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTP 353
+F + V R+ GD R AF+EFA E A AA N S VLG P+ V PSKT
Sbjct: 123 VFHLHISPHVVDCRMCGDPNSVLRFAFIEFADEEGARAAPNLSRTVLGYYPVNVLPSKTA 182
Query: 354 VRP 356
+ P
Sbjct: 183 IAP 185
>gi|227204205|dbj|BAH56954.1| AT4G10610 [Arabidopsis thaliana]
Length = 206
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/150 (64%), Positives = 112/150 (74%), Gaps = 10/150 (6%)
Query: 80 GESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPN-GFGYTNNFIMHT 138
GESFK +MR+L ++LSKLNPMA EF+PPSL + FN FF N GF NF ++
Sbjct: 59 GESFKR-DMRELHELLSKLNPMAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFPVNE 117
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATL 198
DG+ RRK++ QGKRRMN RTS AQ++E+IRRTVYVSDIDQQVTEEQLA L
Sbjct: 118 DGS--------FRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGL 169
Query: 199 FLTCGQVVDCRICGDPNSVLRFAFVEFTDE 228
F+ GQVVDCRICGDPNSVLRFAF+EFTDE
Sbjct: 170 FIGFGQVVDCRICGDPNSVLRFAFIEFTDE 199
>gi|50726388|dbj|BAD33999.1| RNA-binding protein-like [Oryza sativa Japonica Group]
Length = 316
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 127/210 (60%), Gaps = 23/210 (10%)
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRR-MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLAT 197
+G ++T H + R RN QG+ + R AQ++E +RRT++VSDID VTE+ LA
Sbjct: 120 NGISSTR-HWSRRGSRNFSRQGRSAPFSSRVRRAQKEEFVRRTIFVSDIDHTVTEDMLAE 178
Query: 198 LFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
LF + C VVDCRICGD +S LRFAF+EF DE A AAL L G +LG P+RV PSKTAI
Sbjct: 179 LFGSYCSVVVDCRICGDHSSGLRFAFIEFQDESDAYAALDLDGYVLGICPLRVSPSKTAI 238
Query: 257 APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHST 316
PVNP+FLP +V D+K F E G+V RL+LLGD H T
Sbjct: 239 MPVNPSFLP--------------------QVNVTDLKYFCEEHFGQVFRLKLLGDDGHPT 278
Query: 317 RIAFVEFAMAESAIAALNCSGAVLGSLPIR 346
RIAF+EFA + AI ALN SG PIR
Sbjct: 279 RIAFIEFAEVDGAINALNSSGIFASGQPIR 308
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 51/94 (54%)
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
R + E RTI+ ++ID VT+ + F S C V R+ GD+ R AF+EF
Sbjct: 150 RRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRICGDHSSGLRFAFIEFQD 209
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAP 359
A AAL+ G VLG P+RVSPSKT + P P
Sbjct: 210 ESDAYAALDLDGYVLGICPLRVSPSKTAIMPVNP 243
>gi|413922754|gb|AFW62686.1| hypothetical protein ZEAMMB73_396388 [Zea mays]
Length = 279
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 114/170 (67%), Gaps = 16/170 (9%)
Query: 170 NAQQDEVIRRTVYVSDIDQQ---VTEEQLATLFLTCGQVVDCRICGDPNSVLR------- 219
+A+ D + R V + Q VTEE L LF+ CGQVVDC +CGDPN VL
Sbjct: 67 SAELDRMSSRCVITCRLYVQGWMVTEENLVALFINCGQVVDCHMCGDPNLVLSLLTLCNG 126
Query: 220 ---FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
+ EGARAAL+L+GT+LG+YPV VLPSKTAIAPVN TFLPRS DE EMC+R
Sbjct: 127 STIYGVKNIDVPEGARAALNLSGTVLGYYPVNVLPSKTAIAPVNETFLPRSNDEHEMCAR 186
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLR---LLGDYQHSTRIAFVEF 323
TIYCTNIDKKVTQ D+KLFFES+CGE++ R + D + + + F++F
Sbjct: 187 TIYCTNIDKKVTQADLKLFFESICGELKVCRNGTIKIDLETNKIMDFIKF 236
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGD----------YQHSTRIAFVEFAMAESAIAALNCS 336
VT+ ++ F + CG+V + GD ST + E A AALN S
Sbjct: 90 VTEENLVALFIN-CGQVVDCHMCGDPNLVLSLLTLCNGSTIYGVKNIDVPEGARAALNLS 148
Query: 337 GAVLGSLPIRVSPSKTPVRP 356
G VLG P+ V PSKT + P
Sbjct: 149 GTVLGYYPVNVLPSKTAIAP 168
>gi|242044320|ref|XP_002460031.1| hypothetical protein SORBIDRAFT_02g021070 [Sorghum bicolor]
gi|241923408|gb|EER96552.1| hypothetical protein SORBIDRAFT_02g021070 [Sorghum bicolor]
Length = 288
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/268 (40%), Positives = 143/268 (53%), Gaps = 26/268 (9%)
Query: 98 LNPMAAEFVPPSLANG--QIFNFNPAFFGPNGFGYTNNFIMHTDGT-ANTNGHTTTRRKR 154
LNP A EF+P G + + + F P +G A N T R R
Sbjct: 16 LNPDAREFLPWWRLGGSRKQLSVDAPEFIPTSWGKAAAAAAARGVVIARPNNSGTGRAAR 75
Query: 155 NGYSQGKRRMNC------RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 208
S ++ N ++ +Q DE ++RT++V ID VTEE LA +F G VVDC
Sbjct: 76 RPASNSRQDANSPRNAFFKSHRSQWDETVKRTIFVKYIDHTVTEETLACMFRLFGTVVDC 135
Query: 209 RICGDPNSV-LRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
RICG P S LRF FVE E+ A A+L L G+++G V V S+TAI P+NP FLP+S
Sbjct: 136 RICGHPTSGGLRFGFVELRHEDEALASLDLDGSIIGISAVSVSRSRTAICPINPKFLPQS 195
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAE 327
E E E C RTIYCT+I K V RL+LL + + ST IAF+EFA +
Sbjct: 196 EAEWETCLRTIYCTSISKIVC----------------RLKLLDNGERSTNIAFIEFAEVD 239
Query: 328 SAIAALNCSGAVLGSLPIRVSPSKTPVR 355
AIAAL G + +PIR+ PSK+P+R
Sbjct: 240 GAIAALMSGGIYVDGIPIRMCPSKSPIR 267
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 257 APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHST 316
+P N F E RTI+ ID VT+ + F + G V R+ G H T
Sbjct: 87 SPRNAFFKSHRSQWDETVKRTIFVKYIDHTVTEETLACMFR-LFGTVVDCRICG---HPT 142
Query: 317 ----RIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
R FVE + A+A+L+ G+++G + VS S+T + P P+
Sbjct: 143 SGGLRFGFVELRHEDEALASLDLDGSIIGISAVSVSRSRTAICPINPK 190
>gi|290985874|ref|XP_002675650.1| predicted protein [Naegleria gruberi]
gi|284089247|gb|EFC42906.1| predicted protein [Naegleria gruberi]
Length = 422
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 120/192 (62%), Gaps = 11/192 (5%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
A++D+ I+RT+YV+ ID Q+ E Q+ F CG++V+ R+CGD RFAF EF +E
Sbjct: 80 AEEDDKIKRTIYVTSIDTQILEAQVCEFFSYCGRIVNYRVCGDTQHPTRFAFFEFEQKES 139
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVN--------PTFLPRSEDEREMCSRTIYCTN 282
A+AA+SL+G LG Y +R+L S+T I P +F P D+ +RT+Y N
Sbjct: 140 AQAAVSLSGQFLGRYALRILGSRTPIQPTPGAVGNGAVYSFTPAHHDQ---INRTVYVGN 196
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGS 342
D +T+ D+K FF++ CG V ++ L GD HS R AFVEF ES AL CSG +LG+
Sbjct: 197 ADISLTEDDLKEFFDANCGPVTKVVLAGDAVHSARFAFVEFLHMESRNKALECSGTLLGN 256
Query: 343 LPIRVSPSKTPV 354
IR++PS+TP+
Sbjct: 257 RNIRINPSRTPI 268
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 89/161 (55%), Gaps = 24/161 (14%)
Query: 219 RFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIA---PV--NPT----------- 262
++AFVEF+ E A+ A+ L+GT + +++ S++ I+ PV NPT
Sbjct: 8 KYAFVEFSSSEEAKVAIELSGTEILGKHLKISLSRSPISNPTPVQSNPTQISPTDDNATK 67
Query: 263 --FLPRSE-----DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 315
FL SE +E + RTIY T+ID ++ + + FF S CG + R+ GD QH
Sbjct: 68 YQFLSESELKRKAEEDDKIKRTIYVTSIDTQILEAQVCEFF-SYCGRIVNYRVCGDTQHP 126
Query: 316 TRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRP 356
TR AF EF ESA AA++ SG LG +R+ S+TP++P
Sbjct: 127 TRFAFFEFEQKESAQAAVSLSGQFLGRYALRILGSRTPIQP 167
>gi|414878000|tpg|DAA55131.1| TPA: hypothetical protein ZEAMMB73_948686 [Zea mays]
Length = 237
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/116 (68%), Positives = 87/116 (75%), Gaps = 20/116 (17%)
Query: 188 QQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV 247
VTEE LATLF+ CGQVVDCR+ GDPNSVLRFAFVEFTDEEGARAAL+L+GT LG+YPV
Sbjct: 86 WMVTEENLATLFINCGQVVDCRMRGDPNSVLRFAFVEFTDEEGARAALNLSGTELGYYPV 145
Query: 248 RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 303
VLPSKTAIAPVN TFLPR VTQ D+KLFFES+CGE+
Sbjct: 146 NVLPSKTAIAPVNETFLPR--------------------VTQADLKLFFESICGEI 181
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 274 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 333
C RT VT+ ++ F + CG+V R+ GD R AFVEF E A AAL
Sbjct: 75 CVRTCRLYVQGWMVTEENLATLFIN-CGQVVDCRMRGDPNSVLRFAFVEFTDEEGARAAL 133
Query: 334 NCSGAVLGSLPIRVSPSKTPVRP 356
N SG LG P+ V PSKT + P
Sbjct: 134 NLSGTELGYYPVNVLPSKTAIAP 156
>gi|413918321|gb|AFW58253.1| hypothetical protein ZEAMMB73_482713 [Zea mays]
Length = 249
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 108/176 (61%), Gaps = 41/176 (23%)
Query: 189 QVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVR 248
VTEE LA LF+ C QVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+ T+LG+YPV
Sbjct: 31 MVTEENLAALFINCRQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSRTVLGYYPVN 90
Query: 249 VLPSKTAIAPVNPTFLPR-----------------SEDEREMCSRTI------------- 278
VLPSKTAIAPVN TFLPR +M S+ +
Sbjct: 91 VLPSKTAIAPVNKTFLPRVCKPFGTNMLVLSSWLNVHALYDMVSKKVGRFSVLYSLTMNM 150
Query: 279 YCT--------NIDKKVTQGDIKLFFESVCGEVQRLR---LLGDYQHSTRIAFVEF 323
C NIDKKVTQ D+KLFFES+CGE++ R + D + + + F++F
Sbjct: 151 KCVQGLSTAQINIDKKVTQADLKLFFESICGELKVCRNGTIKIDLETNKIMDFIKF 206
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIR 346
VT+ ++ F + C +V R+ GD R AF+EF E A AALN S VLG P+
Sbjct: 32 VTEENLAALFIN-CRQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSRTVLGYYPVN 90
Query: 347 VSPSKTPVRP 356
V PSKT + P
Sbjct: 91 VLPSKTAIAP 100
>gi|414884993|tpg|DAA61007.1| TPA: hypothetical protein ZEAMMB73_630517 [Zea mays]
Length = 317
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 116/219 (52%), Gaps = 46/219 (21%)
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQ---------------------- 204
++ +Q DE ++RT++V ID VTE+ LA LF G
Sbjct: 106 KSHRSQWDETVKRTIFVKYIDHNVTEDILACLFQLFGTSYIVWDRKVNAYISTRWCIFFY 165
Query: 205 ------VVDCRICGDPNS--VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
VVDCRICGDP S LRF FVE E+ A A+L L G ++ P+ V S+TAI
Sbjct: 166 ITNRYTVVDCRICGDPTSDDGLRFGFVELQHEDEAIASLDLDGYIISVSPLSVSRSRTAI 225
Query: 257 APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHST 316
P+NP FLP+SE E E C RTIYCTNI K V R+RLL + + ST
Sbjct: 226 CPINPKFLPQSEAEWETCLRTIYCTNISKNVC----------------RVRLLDNKERST 269
Query: 317 RIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
IAF+EF AIAAL G + +PIR+ PSK+P+R
Sbjct: 270 NIAFIEFVEVYGAIAALGSGGIYVDGVPIRMCPSKSPIR 308
>gi|357153308|ref|XP_003576409.1| PREDICTED: uncharacterized protein LOC100831764 [Brachypodium
distachyon]
Length = 294
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 130/271 (47%), Gaps = 47/271 (17%)
Query: 96 SKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRN 155
SKLNP+AAEFVP L G N+ + +A T
Sbjct: 25 SKLNPLAAEFVPRWLRQD---------------GRRNSSAVAPPVSAVTPAPVVVGHPVV 69
Query: 156 GYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN 215
GK +T RR + TE+ LA F CG VVDCRIC +P
Sbjct: 70 VSDVGKNNAVPKTRPRA-----RRV-------RNATEKDLADRFRQCGAVVDCRICRNPR 117
Query: 216 SVLRFAFVEFTDE--------------------EGARAALSLAGTMLGFYPVRVLPSKTA 255
S FAF+EF + A AAL L G +G V+V PS+TA
Sbjct: 118 SEFLFAFIEFQYHANFEFHVKQNIKKQMLHPISDDASAALHLKGVTIGDRHVKVAPSRTA 177
Query: 256 IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 315
I VNP+FL +S+ E+EMCSRT+YCTNI+K VT ++ FF++ G V R+RLLGD H
Sbjct: 178 IMHVNPSFLAQSDGEKEMCSRTVYCTNIEKSVTCAELVGFFQAYFGSVSRVRLLGDDNHV 237
Query: 316 TRIAFVEFAMAESAIAALNCSGAVLGSLPIR 346
T IAFVEFA + IAAL G LPIR
Sbjct: 238 TGIAFVEFAEVSADIAALRSIGIYARGLPIR 268
>gi|303278248|ref|XP_003058417.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459577|gb|EEH56872.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 187
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 106/175 (60%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGT 240
V+VS++ V+E LA +F CG+V+DCR CGD +FAFV F AL+L G
Sbjct: 13 VHVSNVSLSVSESALARVFAGCGRVLDCRTCGDCGDKKKFAFVAFETSHEVDQALTLDGF 72
Query: 241 MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVC 300
++ +RV SKTA+ PVNP LP SE + E C RT+Y +NID + D+K FE+
Sbjct: 73 VVDGRAIRVTRSKTAVIPVNPGLLPTSEADVERCGRTVYVSNIDPTTSDDDLKRAFEANA 132
Query: 301 GEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
G ++R L + R AF+EF A SA++AL SG V+G+ +RV PSKTP++
Sbjct: 133 GAIRRAHALSSSRRDARNAFIEFENASSAVSALGMSGRVIGARKVRVVPSKTPLK 187
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSG 337
++ +N+ V++ + F CG V R GD + AFV F + AL G
Sbjct: 13 VHVSNVSLSVSESALARVFAG-CGRVLDCRTCGDCGDKKKFAFVAFETSHEVDQALTLDG 71
Query: 338 AVLGSLPIRVSPSKTPVRPRAP 359
V+ IRV+ SKT V P P
Sbjct: 72 FVVDGRAIRVTRSKTAVIPVNP 93
>gi|413921446|gb|AFW61378.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 206
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 98/167 (58%), Gaps = 25/167 (14%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLAN------GQIFNFNPAFFGPNGFGY---TNNFIMH 137
EMRDL D+LSKLNPMA EFVPPSLA+ PA P +G+ F +
Sbjct: 39 EMRDLEDLLSKLNPMAEEFVPPSLASPISGAGAGHGALTPAPLSPAAYGFYPVNAGFAVA 98
Query: 138 TDG-------TANTNGHTTTRRKRNGYSQGKRR---------MNCRTSNAQQDEVIRRTV 181
+ G A + H K++G N RTS AQ+DE IRRTV
Sbjct: 99 SPGHRGVVSFPAVADAHAGRGMKKDGAGGFGGHGHGHPGRRRTNSRTSMAQRDEAIRRTV 158
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDE 228
YVSDID QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDE
Sbjct: 159 YVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDE 205
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
E RT+Y ++ID +VT+ ++ F + CG+V R+ GD R AF+EF
Sbjct: 152 EAIRRTVYVSDIDHQVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEF 202
>gi|145353373|ref|XP_001420989.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145357398|ref|XP_001422906.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581225|gb|ABO99282.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583150|gb|ABP01265.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 183
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/183 (43%), Positives = 107/183 (58%), Gaps = 1/183 (0%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS-VLRFAFVEFTDEEGAR 232
++ + TV+V D+ V+E +LA +F +CG+++DCR+CGD N+ +AFV F E
Sbjct: 1 EKAVPYTVFVKDVPASVSERELADVFASCGRIIDCRMCGDANTHKFSYAFVAFECAEAVD 60
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL L T L + V S TA+ PVNP LP++E E E C+RTIY N+DK V +
Sbjct: 61 RALLLDKTPLHGKNIMVKKSDTAVIPVNPLLLPQNEREVESCARTIYVANVDKTVDSHAL 120
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKT 352
KL FE G V RL L +AFVEF ES AL+ +G LG+ IRVS SKT
Sbjct: 121 KLLFEDRAGPVNRLHLQVKNNAVANVAFVEFVDLESVGTALHLTGEQLGNRMIRVSASKT 180
Query: 353 PVR 355
P+R
Sbjct: 181 PLR 183
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDE 228
N ++ E RT+YV+++D+ V L LF G V + N+V AFVEF D
Sbjct: 95 NEREVESCARTIYVANVDKTVDSHALKLLFEDRAGPVNRLHLQVKNNAVANVAFVEFVDL 154
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAI 256
E AL L G LG +RV SKT +
Sbjct: 155 ESVGTALHLTGEQLGNRMIRVSASKTPL 182
>gi|238008810|gb|ACR35440.1| unknown [Zea mays]
Length = 92
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/88 (73%), Positives = 72/88 (81%)
Query: 273 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA 332
M RT+YCTNIDK VTQ D+K FFE +CGEV RLRLLGD HSTRIAFVEF AE AI A
Sbjct: 1 MVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAEGAIMA 60
Query: 333 LNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
LNCSG +LG+LP+RVSPSKTPV+PR R
Sbjct: 61 LNCSGMILGTLPVRVSPSKTPVKPRVNR 88
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
++ RTVY ++ID+ VT+ + F CG+V R+ GD R AFVEF EGA A
Sbjct: 1 MVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAEGAIMA 60
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAP 258
L+ +G +LG PVRV PSKT + P
Sbjct: 61 LNCSGMILGTLPVRVSPSKTPVKP 84
>gi|308810827|ref|XP_003082722.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
gi|116061191|emb|CAL56579.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
Length = 650
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 120/238 (50%), Gaps = 5/238 (2%)
Query: 123 FGPNGFGYTNNFIMHTDGTANTNGHTTTRRK-RNGYSQGKRRMNCRTSNAQQDEVIR--- 178
+GPN +G N RR +G G+ + R S + + R
Sbjct: 135 YGPNEMSPPGGLYAGPNGRVGNNMDNQWRRANSDGSGGGRHTYHGRHSVSDERAGGRGSP 194
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS-VLRFAFVEFTDEEGARAALSL 237
TV+V +I V+E +LA F CG++VDCR+C D NS +AFV F + + ALSL
Sbjct: 195 NTVFVKEIPASVSERELAETFAACGRIVDCRMCRDANSNKFSYAFVAFETADEVQNALSL 254
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L + V S TA+ PVNP LP++E E E +RTIY N+DK V +K FFE
Sbjct: 255 DKMSLHGKNIVVRRSDTAVIPVNPLLLPQNEAELESTARTIYVANVDKSVDSDALKTFFE 314
Query: 298 SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
G V RL L +AFVEF ESA ++L +G LG +RVS SKTP+R
Sbjct: 315 RHAGAVNRLHLQVKNAADANVAFVEFVNLESAASSLRLTGKQLGQRVVRVSASKTPLR 372
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 94/211 (44%), Gaps = 30/211 (14%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD-----CRICGDPNSVLRFAFVE 224
N + E RT+YV+++D+ V + L T F V+ + D N AFVE
Sbjct: 284 NEAELESTARTIYVANVDKSVDSDALKTFFERHAGAVNRLHLQVKNAADAN----VAFVE 339
Query: 225 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM----------- 273
F + E A ++L L G LG VRV SKT + VN R ++R M
Sbjct: 340 FVNLESAASSLRLTGKQLGQRVVRVSASKTPLR-VNR----RMSEQRAMSYYASGTNGDA 394
Query: 274 ----CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESA 329
+Y +NI K ++ G ++ F S CG V + LL + + AFVEF AESA
Sbjct: 395 ATPPAPTKVYISNIPKNLSPGTLRAMF-SECGRVTNVELLNNPKSKFPYAFVEFDDAESA 453
Query: 330 IAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
ALN G + I + + R APR
Sbjct: 454 KRALNFRGREVQGCAINIELTYNKKRRGAPR 484
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 90/190 (47%), Gaps = 24/190 (12%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG- 239
VY+S+I + ++ L +F CG+V + + +P S +AFVEF D E A+ AL+ G
Sbjct: 403 VYISNIPKNLSPGTLRAMFSECGRVTNVELLNNPKSKFPYAFVEFDDAESAKRALNFRGR 462
Query: 240 --------TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
L + R + A+ PV S D+ E RT++ T+ID +
Sbjct: 463 EVQGCAINIELTYNKKRRGAPRLALDPV-------SVDKME---RTVFVTDIDPDLEPSF 512
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTR--IAFVEFAMAESAIAALN-CSGAVLG-SLPIRV 347
++ FE CG V L ++ + +A++EF S AL+ C LG S I+V
Sbjct: 513 VRSKFEDECGPVT-LFWYKAFEKGEKQALAYIEFTELSSVEKALDQCRTHFLGESRLIKV 571
Query: 348 SPSKTPVRPR 357
S TP+ P+
Sbjct: 572 RHSHTPLVPK 581
>gi|413926011|gb|AFW65943.1| hypothetical protein ZEAMMB73_108884 [Zea mays]
Length = 92
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/88 (77%), Positives = 74/88 (84%)
Query: 273 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA 332
M SRT+YCTNIDKKVT+ D+K FF+ CG+V RLRLL D HST IAFVEFA AESAI A
Sbjct: 1 MVSRTVYCTNIDKKVTEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESAIMA 60
Query: 333 LNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
LN SG VLGSLPIRVSPSKTPVRPR+PR
Sbjct: 61 LNFSGMVLGSLPIRVSPSKTPVRPRSPR 88
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
++ RTVY ++ID++VTEE + F CG+V R+ D AFVEF E A A
Sbjct: 1 MVSRTVYCTNIDKKVTEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESAIMA 60
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNP 261
L+ +G +LG P+RV PSKT + P +P
Sbjct: 61 LNFSGMVLGSLPIRVSPSKTPVRPRSP 87
>gi|414876665|tpg|DAA53796.1| TPA: hypothetical protein ZEAMMB73_994570 [Zea mays]
Length = 266
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/142 (50%), Positives = 91/142 (64%), Gaps = 19/142 (13%)
Query: 190 VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRV 249
VTEE LATLF+ CGQVV+CR+CGDPNSVLRFAF+EFTDE F P
Sbjct: 93 VTEENLATLFINCGQVVECRMCGDPNSVLRFAFIEFTDEVNET-----------FLPRVC 141
Query: 250 LPSKTAIAPVNP-----TFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQ 304
PS T + ++ S+DEREMC+RTIY TNIDKKVTQ D+KLFFES+CGE++
Sbjct: 142 KPSGTNMLVLSSWLNVHALSDMSDDEREMCARTIYYTNIDKKVTQADLKLFFESICGELK 201
Query: 305 RLR---LLGDYQHSTRIAFVEF 323
R + D + + + F++F
Sbjct: 202 VCRNGTIKIDLETNKIMDFIKF 223
>gi|414585783|tpg|DAA36354.1| TPA: hypothetical protein ZEAMMB73_057809 [Zea mays]
Length = 217
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 72/87 (82%)
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 279
FAF+EF+DEEGAR AL+L GT+ GFYPVRVLPSKTA+ PVNP FLPR++DE+EM RT+Y
Sbjct: 60 FAFIEFSDEEGARTALNLGGTIFGFYPVRVLPSKTAMLPVNPKFLPRTDDEKEMVMRTVY 119
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRL 306
TNIDK VTQ D+ FFE +CGE Q L
Sbjct: 120 RTNIDKMVTQLDVNKFFEELCGERQCL 146
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 318 IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
AF+EF+ E A ALN G + G P+RV PSKT + P P+
Sbjct: 60 FAFIEFSDEEGARTALNLGGTIFGFYPVRVLPSKTAMLPVNPK 102
>gi|413936264|gb|AFW70815.1| hypothetical protein ZEAMMB73_092717 [Zea mays]
Length = 271
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 87/132 (65%), Gaps = 11/132 (8%)
Query: 132 NNFIMHTDGTAN--TNGHTTTRRK--RNGYSQGKRRMNCRTSNAQ------QDEVIRRTV 181
N + + DG N +GH + + +N Y+ G+R ++C QD ++ V
Sbjct: 35 NGYYVAYDGWGNREEHGHHFSIKLILKNVYNAGQRGISCLGLGVSDRYLDDQDHILS-LV 93
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
+ I VTEE L TLF+ CGQVVDCR+CGDPNSVLRFAF+EF DEEGARAAL+L+GT+
Sbjct: 94 FHLHISPHVTEENLTTLFINCGQVVDCRMCGDPNSVLRFAFIEFADEEGARAALNLSGTV 153
Query: 242 LGFYPVRVLPSK 253
LG+YPV VLPSK
Sbjct: 154 LGYYPVNVLPSK 165
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
R D+++ ++ +I VT+ ++ F + CG+V R+ GD R AF+EFA
Sbjct: 81 RYLDDQDHILSLVFHLHISPHVTEENLTTLFIN-CGQVVDCRMCGDPNSVLRFAFIEFAD 139
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
E A AALN SG VLG P+ V PSK P+
Sbjct: 140 EEGARAALNLSGTVLGYYPVNVLPSKLPLH 169
>gi|294460213|gb|ADE75689.1| unknown [Picea sitchensis]
Length = 79
Score = 124 bits (310), Expect = 8e-26, Method: Composition-based stats.
Identities = 56/77 (72%), Positives = 65/77 (84%), Gaps = 2/77 (2%)
Query: 241 MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVC 300
MLG+YPVRVLPSKTAIAPVNPTFLPR+E+EREMC+RTIYCTNIDKKV+Q D+K FFE++C
Sbjct: 1 MLGYYPVRVLPSKTAIAPVNPTFLPRTEEEREMCARTIYCTNIDKKVSQSDLKAFFETLC 60
Query: 301 GEVQRL--RLLGDYQHS 315
G + RL Y HS
Sbjct: 61 GFSLEIAWRLSSFYSHS 77
>gi|440801206|gb|ELR22227.1| RNAbinding protein, putative [Acanthamoeba castellanii str. Neff]
Length = 533
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 105/203 (51%), Gaps = 36/203 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD-PNSVLRFAFVEFTDEEGARAALSLA 238
TVYV+ +D Q+ EE + LF CG V + R+CG+ N RFAFVEF+ E A A+ L
Sbjct: 164 TVYVTGVDTQLREEHVIQLFSLCGTVTNIRMCGETENKATRFAFVEFSTRESALMAMGLT 223
Query: 239 GTMLGFYPVRVLPSKTAI--------------------------APVNPTFLPRSEDERE 272
+LG P++V+PSKTAI A +PT+ +E
Sbjct: 224 NIVLGNAPIKVMPSKTAIQAGSRGGGGGPGGGGGPRPPHHAHAAAAFDPTY-------QE 276
Query: 273 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIA 331
SRT+Y +D +++ ++ F S G V +L + GD H R AFVEF+ A
Sbjct: 277 RASRTLYVGGVDSNLSEAELLQMF-SGFGTVTKLAMAGDTTVHQARFAFVEFSTVAEAHM 335
Query: 332 ALNCSGAVLGSLPIRVSPSKTPV 354
AL +G V+G PIRVS SKTP+
Sbjct: 336 ALAMNGTVVGERPIRVSQSKTPI 358
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 106/233 (45%), Gaps = 58/233 (24%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSL 237
+RTVYV I + E L F TC ++ R+ GDP+ RF F+EF EGA+ A ++
Sbjct: 13 QRTVYVGCIPSNLNSETLGHFFSTCDTIIQIRLAGDPSYSTRFGFIEFATPEGAQRACNM 72
Query: 238 AGTMLGFYPVRVLPSKTAI----------------------------------------- 256
G L +R+ SKTAI
Sbjct: 73 NGVELDGKKLRITLSKTAISSTSSHSGHSAHSAQSDASSAYASAAAGHMGLHAYGAAYGM 132
Query: 257 ------------APVNPTFLP-RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 303
A + P + P ++R C T+Y T +D ++ + + F S+CG V
Sbjct: 133 GYGAQGGMPYMHAGMPPAYAPAHGSNDRVAC--TVYVTGVDTQLREEHVIQLF-SLCGTV 189
Query: 304 QRLRLLGDYQH-STRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
+R+ G+ ++ +TR AFVEF+ ESA+ A+ + VLG+ PI+V PSKT ++
Sbjct: 190 TNIRMCGETENKATRFAFVEFSTRESALMAMGLTNIVLGNAPIKVMPSKTAIQ 242
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN-SVLRFAFVEFTDEEGARA 233
E RT+YV +D ++E +L +F G V + GD RFAFVEF+ A
Sbjct: 276 ERASRTLYVGGVDSNLSEAELLQMFSGFGTVTKLAMAGDTTVHQARFAFVEFSTVAEAHM 335
Query: 234 ALSLAGTMLGFYPVRVLPSKTAI 256
AL++ GT++G P+RV SKT I
Sbjct: 336 ALAMNGTVVGERPIRVSQSKTPI 358
>gi|413944598|gb|AFW77247.1| hypothetical protein ZEAMMB73_128485 [Zea mays]
Length = 331
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 63/75 (84%)
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
+GAR AL+L GT+ GFYPVRVLPSKTAI PVNP FLPR++DE+EM RT+Y TNIDK VT
Sbjct: 135 KGARTALNLGGTIFGFYPVRVLPSKTAILPVNPKFLPRTDDEKEMVMRTVYRTNIDKMVT 194
Query: 289 QGDIKLFFESVCGEV 303
Q D+K FFE +CGE+
Sbjct: 195 QLDVKKFFEELCGEL 209
>gi|224132620|ref|XP_002321367.1| predicted protein [Populus trichocarpa]
gi|222868363|gb|EEF05494.1| predicted protein [Populus trichocarpa]
Length = 74
Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats.
Identities = 50/59 (84%), Positives = 55/59 (93%)
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
SEDERE+C+RTIYCTNIDKK+TQ D+KLFFES CGEV RLRLLGDY HSTRIAFVEFA+
Sbjct: 2 SEDEREICARTIYCTNIDKKITQADVKLFFESFCGEVHRLRLLGDYHHSTRIAFVEFAV 60
Score = 43.9 bits (102), Expect = 0.11, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEF 225
+ E+ RT+Y ++ID+++T+ + F + CG+V R+ GD + R AFVEF
Sbjct: 5 EREICARTIYCTNIDKKITQADVKLFFESFCGEVHRLRLLGDYHHSTRIAFVEF 58
>gi|290997908|ref|XP_002681523.1| predicted protein [Naegleria gruberi]
gi|284095147|gb|EFC48779.1| predicted protein [Naegleria gruberi]
Length = 408
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 108/188 (57%), Gaps = 14/188 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC------GDPNSVL--RFAFVEFTDEEG 230
RT+++S ID +E++L F G + + R+C + N+ L +FAF+E+ E
Sbjct: 205 RTIHISGIDSSFSEDELLDYFSVYGDITNYRLCNNDQQSSNSNTQLQTKFAFIEYATTEQ 264
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAI-APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 289
+ A+ + G++ G ++V SKTAI P + + + R++ RTI+ ID K++Q
Sbjct: 265 SLKAIMVNGSLWGKSKLKVSHSKTAIQTPPKKSLIDK--QYRDLVERTIHVGGIDVKLSQ 322
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSG-AVLGSLP-IR 346
+K FFE +CG + R+ + GD + + TR F+EF +S + AL SG + GS+ I+
Sbjct: 323 DHVKAFFEELCGAIHRIAMAGDTESYETRFCFIEFEDKQSTLRALRLSGCTIAGSVKQIK 382
Query: 347 VSPSKTPV 354
VSPSK+P+
Sbjct: 383 VSPSKSPI 390
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
RT+++ +I T E L LF GQV + ++ GDP+ RFAFVEF D A+ +LSL
Sbjct: 33 RTIHIGNISSYTTVESLQLLFSKYGQVTNIKLAGDPSYAKRFAFVEFVDHHQAKLSLSLD 92
Query: 239 GT 240
GT
Sbjct: 93 GT 94
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 269 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS--------TRIAF 320
D SRTI+ + ID ++ ++ +F SV G++ RL + Q S T+ AF
Sbjct: 198 DANSAASRTIHISGIDSSFSEDELLDYF-SVYGDITNYRLCNNDQQSSNSNTQLQTKFAF 256
Query: 321 VEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
+E+A E ++ A+ +G++ G ++VS SKT ++
Sbjct: 257 IEYATTEQSLKAIMVNGSLWGKSKLKVSHSKTAIQ 291
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN 334
SRTI+ NI T ++L F S G+V ++L GD ++ R AFVEF A +L+
Sbjct: 32 SRTIHIGNISSYTTVESLQLLF-SKYGQVTNIKLAGDPSYAKRFAFVEFVDHHQAKLSLS 90
Query: 335 CSGAVLGSLPIRVSPSK 351
G +++S +K
Sbjct: 91 LDGTEFMGQNLKISMAK 107
>gi|413954118|gb|AFW86767.1| hypothetical protein ZEAMMB73_327506, partial [Zea mays]
Length = 81
Score = 110 bits (275), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/59 (83%), Positives = 56/59 (94%)
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
EGARAAL+L+GT+LG+YP+ VL SKTAIAPVN TFLPRS+DEREMC+RTIYCTNIDKKV
Sbjct: 14 EGARAALNLSGTVLGYYPINVLLSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKV 72
>gi|255079476|ref|XP_002503318.1| predicted protein [Micromonas sp. RCC299]
gi|226518584|gb|ACO64576.1| predicted protein [Micromonas sp. RCC299]
Length = 144
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 15/144 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--------------NSVLRFAFVEF 225
TVYV +I +E + F TCG V +CR+ DP N R AFV F
Sbjct: 1 TVYVREIPAGASEADVHDHFYTCGAVRECRVSADPHPPSKTDAGAGPDTNKKTRVAFVAF 60
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
E R AL++ G++L P++V+PS+T + PVNP LPR+E+ERE C+RT+Y +N+D
Sbjct: 61 ETENAVREALTMDGSLLLGEPIQVMPSRTEVMPVNPGLLPRTEEERERCARTVYVSNVDP 120
Query: 286 KVTQGDIKLFFESVC-GEVQRLRL 308
V +++ E++ G++ L L
Sbjct: 121 DVRSNELRSALEAIADGKIAALHL 144
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 15/97 (15%)
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--------------HSTRIAFVE 322
T+Y I ++ D+ F + CG V+ R+ D TR+AFV
Sbjct: 1 TVYVREIPAGASEADVHDHFYT-CGAVRECRVSADPHPPSKTDAGAGPDTNKKTRVAFVA 59
Query: 323 FAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAP 359
F + AL G++L PI+V PS+T V P P
Sbjct: 60 FETENAVREALTMDGSLLLGEPIQVMPSRTEVMPVNP 96
>gi|255638879|gb|ACU19742.1| unknown [Glycine max]
Length = 179
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 95/167 (56%), Gaps = 21/167 (12%)
Query: 1 MAVAENAGAKIDSSNQNLDDTVVSSDSNDVQNSNDHSKERSGNGNANIQIQNGQTKPGA- 59
MAV EN GAKI SS+Q+L++ VVS+DS +V+ S + NG N Q Q+ +T PG
Sbjct: 1 MAVVENVGAKIGSSSQSLENGVVSADSGEVEKSKTRGDQDMNNGVFNHQ-QHQETVPGTM 59
Query: 60 ---GAGGGFVNVNASDNH--------MERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPP 108
+ + N +N E GESFK +MRDL ++LSKLNPMA EFVPP
Sbjct: 60 PVPNGNFSYKHANGVNNDGYGMNGVMSEENGGESFK-RDMRDLEELLSKLNPMAEEFVPP 118
Query: 109 SLANGQIFNFNPAFFGPN-GFGYTNNFIMHTDGTANTNGHTTTRRKR 154
SLAN GPN GFGYTNNFI+ + NTNG T RR R
Sbjct: 119 SLANTHGL-----LAGPNAGFGYTNNFIL-PNNYGNTNGQTNNRRGR 159
>gi|328769388|gb|EGF79432.1| hypothetical protein BATDEDRAFT_35374 [Batrachochytrium
dendrobatidis JAM81]
Length = 555
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 34/204 (16%)
Query: 185 DIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTML 242
++ +Q+TEE L F G +V + C + N +++ + V+F D E A AL L GT+L
Sbjct: 22 NLSKQITEELLCQFFSFIGPIVSISLQPC-EANPLVQESLVQFQDSEDAALALHLTGTVL 80
Query: 243 GFYPVRVLPSKTAI-----------APVNPT--------------FLPRSEDE----REM 273
+ + P I P NPT +P + ++
Sbjct: 81 ADKALFITPPSAKIQSFNSHGYLNIPPPNPTAPGVLVPGSMAGSTIVPYGQTATIAGQDS 140
Query: 274 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 333
RTIY NI ++Q ++ + F S CG+V ++++ GD HSTR AF+EFA +ESA AL
Sbjct: 141 VDRTIYTGNIHSGLSQQEVSMLFSS-CGDVTQVKMAGDATHSTRYAFIEFATSESAAMAL 199
Query: 334 NCSGAVLGSLPIRVSPSKTPV-RP 356
N G ++ I+V+ SK + RP
Sbjct: 200 NLHGMMVAGRAIKVNRSKHSIGRP 223
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
A QD V RT+Y +I +++++++ LF +CG V ++ GD R+AF+EF E
Sbjct: 136 AGQDSV-DRTIYTGNIHSGLSQQEVSMLFSSCGDVTQVKMAGDATHSTRYAFIEFATSES 194
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAI 256
A AL+L G M+ ++V SK +I
Sbjct: 195 AAMALNLHGMMVAGRAIKVNRSKHSI 220
>gi|384249045|gb|EIE22527.1| hypothetical protein COCSUDRAFT_66269 [Coccomyxa subellipsoidea
C-169]
Length = 303
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 96/178 (53%), Gaps = 13/178 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
RT+YV ++ ++V E L LF CG V RI GDP+ R+AF+EFT E ++ A+ L
Sbjct: 6 RTIYVGNVGKEVDENALMALFGHCGTVTQIRIAGDPSYDTRYAFIEFTTPEESQTAMMLD 65
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID-KKVTQGDIKLFFE 297
G M+ +RV ++ P + RS D + RTI+ + ++++ I +F
Sbjct: 66 GMMVFERQIRVNMARGGSGP----GVVRSNDP-DRVQRTIHIGGLPFDELSEESISDYFS 120
Query: 298 SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
++ GEV +R G R A+VEF ++A A++ G LGS ++VS SKTP+
Sbjct: 121 NI-GEVNAVRKSG------RFAWVEFNTLQAAQTAMSLDGESLGSGTMKVSASKTPIH 171
>gi|440795967|gb|ELR17076.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 347
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 42/216 (19%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 239
TV V++I TE+ L F CG +V + GD + ++AFV F A AAL+L+
Sbjct: 39 TVIVTNISPLATEQDLRDFFANCGNIVQINLLGDGLGISQYAFVRFETMAQANAALTLST 98
Query: 240 TMLGFYPVRV-----------------------------------------LPSKTAIAP 258
+ PV++ +P A+
Sbjct: 99 GAVAGMPVKIVMAASDIPVGGAAAAATAALPTPLALTPGVGAASGLGLLGAIPHSLALLS 158
Query: 259 VNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI 318
+P ++++ +RTIY N++ +T + FF ++CG + RL GD H +R
Sbjct: 159 GSPANAQSYHEKQDEIARTIYVGNVNSTITSEQLMQFF-AICGPITFCRLAGDESHPSRF 217
Query: 319 AFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPV 354
AF+EFA E+A AA+ +G +L ++V+ SK P+
Sbjct: 218 AFIEFATKEAAQAAMMLNGTMLLDRAVKVNHSKNPI 253
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVE 224
N ++ + +QDE I RT+YV +++ +T EQL F CG + CR+ GD + RFAF+E
Sbjct: 163 NAQSYHEKQDE-IARTIYVGNVNSTITSEQLMQFFAICGPITFCRLAGDESHPSRFAFIE 221
Query: 225 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
F +E A+AA+ L GTML V+V SK I
Sbjct: 222 FATKEAAQAAMMLNGTMLLDRAVKVNHSKNPI 253
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 251 PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLG 310
P + PV P F T+ TNI T+ D++ FF + CG + ++ LLG
Sbjct: 23 PGSDGLLPVPPQF----------SVSTVIVTNISPLATEQDLRDFFAN-CGNIVQINLLG 71
Query: 311 DYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
D ++ AFV F A AAL S + +P+++
Sbjct: 72 DGLGISQYAFVRFETMAQANAALTLSTGAVAGMPVKI 108
>gi|224109734|ref|XP_002333211.1| predicted protein [Populus trichocarpa]
gi|222835117|gb|EEE73552.1| predicted protein [Populus trichocarpa]
Length = 50
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/42 (83%), Positives = 37/42 (88%)
Query: 320 FVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRP 361
F++ AE AIAALNCSGAVLGSLPIRVSPSKTPVRPR PRP
Sbjct: 6 FLQLLQAEGAIAALNCSGAVLGSLPIRVSPSKTPVRPRIPRP 47
Score = 40.4 bits (93), Expect = 1.3, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 222 FVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
F++ EGA AAL+ +G +LG P+RV PSKT + P P
Sbjct: 6 FLQLLQAEGAIAALNCSGAVLGSLPIRVSPSKTPVRPRIP 45
>gi|156392403|ref|XP_001636038.1| predicted protein [Nematostella vectensis]
gi|156223137|gb|EDO43975.1| predicted protein [Nematostella vectensis]
Length = 686
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 75/145 (51%), Gaps = 7/145 (4%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE 229
+A + E IRRTV+V+++D ++T E L + F +CG + R+ GD R+A++EF + +
Sbjct: 152 DANKVEEIRRTVFVNNLDPEITAEMLLSFFSSCGDIKYIRMGGDDGKPTRYAYIEFAETQ 211
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 289
+AL +G + G P++V SK A++ P P+ D + C + KV
Sbjct: 212 AIVSALQYSGAIFGGKPIKVTHSKNAVS--KPP--PKHSDRKRACFGVFNGMGVQVKVLH 267
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQH 314
+ SVC + ++ L+G H
Sbjct: 268 A---RWLHSVCHCLYQMVLVGRTGH 289
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 107/240 (44%), Gaps = 59/240 (24%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL---RFAFVEFTDEEGARAAL 235
+ + VS++ T EQL LF G+V D ++ + ++ + FV+F D AL
Sbjct: 11 KLIQVSNVAHNATLEQLKVLFSFIGEVEDLKLFPESPAITVQSKVCFVKFVDPSSVPIAL 70
Query: 236 SLAGTM-----LGFYPV------------RVLPSKTAIA----------PVNPTFLPR-- 266
L T+ L PV +++ + +A+A P P +P+
Sbjct: 71 HLTNTVFIDKSLIVVPVSDEPVSEEEKALQLVAASSALALGMGDGGGILP-TPALIPQLM 129
Query: 267 ----------------------SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQ 304
++ E RT++ N+D ++T ++ L F S CG+++
Sbjct: 130 SSSGNTIAVPSSVPPPPPLTNVDANKVEEIRRTVFVNNLDPEIT-AEMLLSFFSSCGDIK 188
Query: 305 RLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
+R+ GD TR A++EFA ++ ++AL SGA+ G PI+V+ SK V + PP H
Sbjct: 189 YIRMGGDDGKPTRYAYIEFAETQAIVSALQYSGAIFGGKPIKVTHSKNAV---SKPPPKH 245
>gi|326427350|gb|EGD72920.1| hypothetical protein PTSG_04652 [Salpingoeca sp. ATCC 50818]
Length = 976
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 19/192 (9%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARA 233
E +RTV+V ++D V E+ L F CG + D R+ P+ + FA++EF ++
Sbjct: 686 EAAQRTVFVKNLDFAVDEDMLQMFFKDCGAIRDIRLVRKPSGQSKGFAYIEFEEKSSLAF 745
Query: 234 ALSLAGTMLGFYPVRVLP----SKTAIAPVNPT-FLPRSEDEREMCSRTIYCTNIDKKVT 288
ALS + PV V P SKTA+ P + T F P RT++ +D T
Sbjct: 746 ALSKDRQFMNGRPVLVDPCVDRSKTALRPKHQTGFDP----------RTVFVKRLDHSCT 795
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF-AMAESAIAALNCSGAVLGSLPIR 346
+ D++ FE G V+ +R++ R A+VEF A ++A A +N A ++
Sbjct: 796 EQDVRTLFEQY-GAVKEVRMVTTLAGKPRGFAYVEFEASRDAATAIMNLDKAEFKGRQLQ 854
Query: 347 VSPSKTPVRPRA 358
V+ S P + A
Sbjct: 855 VALSNPPSKGHA 866
>gi|413944368|gb|AFW77017.1| hypothetical protein ZEAMMB73_226641 [Zea mays]
Length = 273
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%), Gaps = 7/58 (12%)
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
+S+DE EMC+RTIYCTNIDKKVTQ D+KLFFES+CGE+ D + + + F++F
Sbjct: 178 QSDDECEMCARTIYCTNIDKKVTQADLKLFFESICGEI-------DLETNKIMDFIKF 228
>gi|414884540|tpg|DAA60554.1| TPA: hypothetical protein ZEAMMB73_865049 [Zea mays]
Length = 401
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 37/41 (90%)
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLR 307
S+DEREMC+RTIY TNIDKKVTQ D+KLFFES+CGE++ R
Sbjct: 299 SDDEREMCARTIYRTNIDKKVTQADLKLFFESICGELKVCR 339
>gi|340382751|ref|XP_003389881.1| PREDICTED: hypothetical protein LOC100632051 [Amphimedon
queenslandica]
Length = 475
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
IRRT+YV ++ + +Q+ FLTCG++ R+ GD RFAFVEF + E + AL
Sbjct: 174 IRRTIYVGNLSSTLHADQVMNFFLTCGEIKYVRMAGDEMQPTRFAFVEFANPESVQVALQ 233
Query: 237 LAGTMLGFYPVRVLPSKTAI 256
G M G P++V SK AI
Sbjct: 234 YNGAMFGDRPIKVNHSKNAI 253
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 253 KTAIAPVNPTFLPRS----EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 308
++A APV P+ P + + + RTIY N+ + + FF + CGE++ +R+
Sbjct: 149 QSAAAPVLPSMPPITGNVDPSKIDEIRRTIYVGNLSSTLHADQVMNFFLT-CGEIKYVRM 207
Query: 309 LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTP-VRPRAPRP 361
GD TR AFVEFA ES AL +GA+ G PI+V+ SK V+P+ P
Sbjct: 208 AGDEMQPTRFAFVEFANPESVQVALQYNGAMFGDRPIKVNHSKNAIVKPQGKAP 261
>gi|340385705|ref|XP_003391349.1| PREDICTED: hypothetical protein LOC100639209, partial [Amphimedon
queenslandica]
Length = 358
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
IRRT+YV ++ + +Q+ F TCG++ R+ GD RFAFVEF + E + AL
Sbjct: 41 IRRTIYVGNLSSTLHADQVMNFFQTCGEIKYVRMAGDETQPTRFAFVEFANPESVQVALQ 100
Query: 237 LAGTMLGFYPVRVLPSKTAI 256
G M G P++V SK AI
Sbjct: 101 YNGAMFGDRPIKVNHSKNAI 120
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 249 VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 308
VLPS + P+ P DE RTIY N+ + + FF++ CGE++ +R+
Sbjct: 22 VLPS---MPPITGNVDPSKIDE---IRRTIYVGNLSSTLHADQVMNFFQT-CGEIKYVRM 74
Query: 309 LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTP-VRPRAPRP 361
GD TR AFVEFA ES AL +GA+ G PI+V+ SK V+P+ P
Sbjct: 75 AGDETQPTRFAFVEFANPESVQVALQYNGAMFGDRPIKVNHSKNAIVKPQGKAP 128
>gi|414584705|tpg|DAA35276.1| TPA: hypothetical protein ZEAMMB73_072205 [Zea mays]
Length = 364
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLR---LLGDYQHSTRIAFVE 322
+S+DEREMC+RTIYCTNIDKKVTQ D KLFFES CGE++ R + D + + + F++
Sbjct: 261 QSDDEREMCARTIYCTNIDKKVTQTDPKLFFESKCGELKVCRNGTIKIDLETNKIMDFIK 320
Query: 323 F 323
F
Sbjct: 321 F 321
>gi|340383093|ref|XP_003390052.1| PREDICTED: hypothetical protein LOC100637518 [Amphimedon
queenslandica]
Length = 428
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
IRRT+YV ++ + +Q+ F TCG++ R+ GD RFAFVEF + E + AL
Sbjct: 109 IRRTIYVGNLSSTLHADQVMNFFQTCGEIKYVRMAGDETQPTRFAFVEFANPESVQVALQ 168
Query: 237 LAGTMLGFYPVRVLPSKTAI 256
G M G P++V SK AI
Sbjct: 169 YNGAMFGDRPIKVNHSKNAI 188
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 253 KTAIAPVNPTFLPRS----EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 308
++A APV P+ P + + + RTIY N+ + + FF++ CGE++ +R+
Sbjct: 84 QSAAAPVLPSMPPITGNVDPSKIDEIRRTIYVGNLSSTLHADQVMNFFQT-CGEIKYVRM 142
Query: 309 LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
GD TR AFVEFA ES AL +GA+ G PI+V+ SK
Sbjct: 143 AGDETQPTRFAFVEFANPESVQVALQYNGAMFGDRPIKVNHSK 185
>gi|291242201|ref|XP_002740997.1| PREDICTED: splicing factor, arginine/serine-rich 12-like
[Saccoglossus kowalevskii]
Length = 574
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 175 EVIRRTVYVSDIDQQ-VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
E IRRT+YV ++D Q VT EQL F G+V R+ GD RFAFVEF+D+ A
Sbjct: 166 EEIRRTIYVGNLDSQTVTAEQLLNFFSQVGEVKYVRMAGDETQPTRFAFVEFSDQNSVAA 225
Query: 234 ALSLAGTMLGFYPVRVLPSKTAI 256
AL+ G M G P+++ S AI
Sbjct: 226 ALTYNGVMFGGRPLKINHSNNAI 248
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 331
E RTIY N+D + + L F S GEV+ +R+ GD TR AFVEF+ S A
Sbjct: 166 EEIRRTIYVGNLDSQTVTAEQLLNFFSQVGEVKYVRMAGDETQPTRFAFVEFSDQNSVAA 225
Query: 332 ALNCSGAVLGSLPIRV 347
AL +G + G P+++
Sbjct: 226 ALTYNGVMFGGRPLKI 241
>gi|198429455|ref|XP_002129672.1| PREDICTED: similar to splicing factor, arginine/serine-rich 12
[Ciona intestinalis]
Length = 373
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICG---DPNSV-LRFAFVEFTDEEGARAALS 236
+ V++I T EQ+ TLF G V+ + DPN+ + AF+++ D A
Sbjct: 7 IQVTNIAPTATLEQIHTLFDHLGTFVEFELFPRNPDPNNPGTKVAFIKYADPSSVGVAQH 66
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPR---------------SEDEREMCSRTIYCT 281
L T+ + +P I P N T + + + + RTIY
Sbjct: 67 LTSTVFIDRALICVPYTDGIIP-NETVAMQFATPATALIQAGGVIDQTKLDEIKRTIYVG 125
Query: 282 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLG 341
N+D K D + F CGEV+ +R+ GD TR AF+EFA E +A+ +G + G
Sbjct: 126 NLDSKQATADQLMTFFGTCGEVKFVRMAGDETQPTRFAFIEFAKIEHVDSAMKLNGTLFG 185
Query: 342 SLPIRVSPSKTPVRPRAPRP 361
++++ S + A +P
Sbjct: 186 DRALKINHSNNAIVKPAVKP 205
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 177 IRRTVYVSDID-QQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
I+RT+YV ++D +Q T +QL T F TCG+V R+ GD RFAF+EF E +A+
Sbjct: 118 IKRTIYVGNLDSKQATADQLMTFFGTCGEVKFVRMAGDETQPTRFAFIEFAKIEHVDSAM 177
Query: 236 SLAGTMLGFYPVRVLPS-----KTAIAPVNPT 262
L GT+ G +++ S K A+ PVN T
Sbjct: 178 KLNGTLFGDRALKINHSNNAIVKPAVKPVNDT 209
>gi|428166786|gb|EKX35755.1| hypothetical protein GUITHDRAFT_118030 [Guillardia theta CCMP2712]
Length = 254
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS------TRIAFVEFAM 325
E S TIY N++ +T + FF +VCG+V +R+ GD + TR AFV+F
Sbjct: 16 EGASCTIYVGNLNPSITAEQLNQFFSAVCGQVLHVRMAGDDPATAFRFDRTRFAFVQFLS 75
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKTP-VRPRAPRP 361
E A A+ SG +LG LPI+ P+K P V+PR+ P
Sbjct: 76 KEQADIAMTLSGTILGGLPIKCGPAKNPIVQPRSVLP 112
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 13/95 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGD-PNSVLRF-----AFVEFTDEEGAR 232
T+YV +++ +T EQL F CGQV+ R+ GD P + RF AFV+F +E A
Sbjct: 21 TIYVGNLNPSITAEQLNQFFSAVCGQVLHVRMAGDDPATAFRFDRTRFAFVQFLSKEQAD 80
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
A++L+GT+LG P++ P+K NP PRS
Sbjct: 81 IAMTLSGTILGGLPIKCGPAK------NPIVQPRS 109
>gi|413941688|gb|AFW74337.1| hypothetical protein ZEAMMB73_453710 [Zea mays]
Length = 50
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/47 (76%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
Query: 318 IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
I F+ F AESA AALNCSG +LGSLPIRVSPSKTPVRPRAPR +H
Sbjct: 5 ICFLIF-QAESATAALNCSGVILGSLPIRVSPSKTPVRPRAPRQLMH 50
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDE 228
A Q + ++YV D++ VT+ QL LF GQVV R+C D NS L +A+V +++
Sbjct: 114 AAQQPLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNP 173
Query: 229 -EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
+ ARA +L L P+RV+ S R R S I+ N+DK +
Sbjct: 174 MDAARAMEALNFAPLNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDKTI 221
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIR 346
+ F + + + D S FV++ ESA +A+ + +G ++ P+
Sbjct: 222 DNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVY 281
Query: 347 VSP 349
V P
Sbjct: 282 VGP 284
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 220
KRR +A D+ + +Y+ ++D +T++QL LF G++ C+I D N V +
Sbjct: 387 KRRFEQSMKDAA-DKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKG 445
Query: 221 A-FVEF-TDEEGARAALSLAGTMLGFYPVRV 249
+ FV F T EE ++A + G M+ P+ V
Sbjct: 446 SGFVSFSTREEASQALTEMNGKMISGKPLYV 476
>gi|401423147|ref|XP_003876060.1| putative poly(A)-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492301|emb|CBZ27575.1| putative poly(A)-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 544
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 98/220 (44%), Gaps = 31/220 (14%)
Query: 127 GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRT----VY 182
G+GY N F D + T G + G++ R + +D + R++ V+
Sbjct: 52 GYGYVN-FQTPADAEKVIDALNYT-----GITPGRQ---IRVMFSIRDPIQRKSGMNNVF 102
Query: 183 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAGTM 241
V +D V ++L F CG+V+ C++ D + + FV+F +GA+AAL + G+
Sbjct: 103 VKKLDTAVNAKELQAAFTKCGRVLSCKVALDSAGNSKGYGFVQFETADGAKAALEMDGSK 162
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFFESV 299
LG V V P FL R + E R IY N+ V + D+K E+
Sbjct: 163 LGDCEVVVAP-----------FLRRVDREVMAAKSFRNIYIKNLKATVAEADVKTTVETF 211
Query: 300 CGEVQRLRLLGDYQHSTRIAFVEFAMAES---AIAALNCS 336
G+V L L T+ A V F E+ AIAALN S
Sbjct: 212 -GKVNSLFLSEHAPFPTKFALVAFEEHEAAVKAIAALNES 250
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 22/182 (12%)
Query: 176 VIRRTVYVSD--IDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEF---TDE 228
V R +VYV D ID EE + LF T VV ++C D L + +V F D
Sbjct: 5 VQRTSVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTPADA 64
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
E AL+ G G +RV+ F R +R+ ++ +D V
Sbjct: 65 EKVIDALNYTGITPG-RQIRVM------------FSIRDPIQRKSGMNNVFVKKLDTAVN 111
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
+++ F + CG V ++ D +++ FV+F A+ A AAL G+ LG + V
Sbjct: 112 AKELQAAF-TKCGRVLSCKVALDSAGNSKGYGFVQFETADGAKAALEMDGSKLGDCEVVV 170
Query: 348 SP 349
+P
Sbjct: 171 AP 172
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-S 236
R +YV + +T+++L +F G++ C I +PN + FAFV F D + A AAL S
Sbjct: 289 RNLYVKHLPDDITDDRLREIFAPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAALRS 348
Query: 237 LAGTML 242
L G L
Sbjct: 349 LNGHSL 354
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDE 228
A Q + ++YV D++ VT+ QL LF GQVV R+C D NS L +A+V +++
Sbjct: 114 AAQQPLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNP 173
Query: 229 -EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
+ ARA +L L P+RV+ S R R S I+ N+DK +
Sbjct: 174 MDAARAMEALNFAPLNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDKTI 221
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIR 346
+ F + + + D S FV++ ESA +A+ + +G ++ P+
Sbjct: 222 DNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVY 281
Query: 347 VSP 349
V P
Sbjct: 282 VGP 284
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 220
KRR +A D+ + +Y+ ++D +T++QL LF G++ C+I D N V +
Sbjct: 387 KRRFEQSMKDAA-DKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKG 445
Query: 221 A-FVEF-TDEEGARAALSLAGTMLGFYPVRV 249
+ FV F T EE ++A + G M+ P+ V
Sbjct: 446 SGFVSFSTREEASQALTEMNGKMISGKPLYV 476
>gi|398016302|ref|XP_003861339.1| poly(A)-binding protein, putative [Leishmania donovani]
gi|322499565|emb|CBZ34638.1| poly(A)-binding protein, putative [Leishmania donovani]
Length = 544
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 127 GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRT----VY 182
G+GY N F D + T G + G++ R + +D + R++ V+
Sbjct: 52 GYGYVN-FQTTADAEKVIDALNYT-----GIAPGRQ---IRVMFSIRDPLQRKSGMNNVF 102
Query: 183 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAGTM 241
V +D + ++L F CG+V+ C++ D + + FV+F EGA+AAL + G+
Sbjct: 103 VKKLDTAINAKELQAAFTKCGRVLSCKVALDSAGNSKGYGFVQFETAEGAKAALDMNGSK 162
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCTNIDKKVTQGDIKLFFES 298
LG S+ +AP R D M + R IY NI T+ D+K E
Sbjct: 163 LG-------DSEVVVAP-----FVRRVDREVMAAKSFRNIYIKNIAAAATEADVKAAAEK 210
Query: 299 VCGEVQRLRLLGDYQHSTRIAFVEFAMAES---AIAALNCS 336
G+V L L T+ A V F E+ AIAALN S
Sbjct: 211 F-GKVNSLFLSEHAPFPTKFALVAFEEHEAAVQAIAALNES 250
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 176 VIRRTVYVSD--IDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEF---TDE 228
V R +VYV D ID EE + LF T VV ++C D L + +V F D
Sbjct: 5 VQRTSVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTTADA 64
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
E AL+ G G +RV+ F R +R+ ++ +D +
Sbjct: 65 EKVIDALNYTGIAPG-RQIRVM------------FSIRDPLQRKSGMNNVFVKKLDTAIN 111
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
+++ F + CG V ++ D +++ FV+F AE A AAL+ +G+ LG + V
Sbjct: 112 AKELQAAF-TKCGRVLSCKVALDSAGNSKGYGFVQFETAEGAKAALDMNGSKLGDSEVVV 170
Query: 348 SP 349
+P
Sbjct: 171 AP 172
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-S 236
R +YV + +T+++L +F G++ C I +PN + FAFV F D + A AAL S
Sbjct: 289 RNLYVKHLPDDITDDRLREIFEPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAALRS 348
Query: 237 LAGTML 242
L G L
Sbjct: 349 LNGQPL 354
>gi|146088402|ref|XP_001466041.1| putative poly(A)-binding protein 3 [Leishmania infantum JPCM5]
gi|134070143|emb|CAM68476.1| putative poly(A)-binding protein 3 [Leishmania infantum JPCM5]
Length = 544
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 97/221 (43%), Gaps = 33/221 (14%)
Query: 127 GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRT----VY 182
G+GY N F D + T G + G + R + +D + R++ V+
Sbjct: 52 GYGYVN-FQTTADAEKVIDALNYT-----GIAPG---LQIRVMFSIRDPLQRKSGMNNVF 102
Query: 183 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAGTM 241
V +D + ++L F CG+V+ C++ D + + FV+F EGA+AAL + G+
Sbjct: 103 VKKLDTAINAKELQAAFTKCGRVLSCKVALDSAGNSKGYGFVQFETAEGAKAALDMNGSK 162
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCTNIDKKVTQGDIKLFFES 298
LG S+ +AP R D M + R IY NI T+ D+K E
Sbjct: 163 LG-------DSEVVVAP-----FVRRVDREVMAAKSFRNIYIKNIAAAATEADVKAAAEK 210
Query: 299 VCGEVQRLRLLGDYQHSTRIAFVEFAMAES---AIAALNCS 336
G+V L L T+ A V F E+ AIAALN S
Sbjct: 211 F-GKVNSLFLSEHAPFPTKFALVAFEEHEAAVQAIAALNES 250
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 176 VIRRTVYVSD--IDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEF---TDE 228
V R +VYV D ID EE + LF T VV ++C D L + +V F D
Sbjct: 5 VQRTSVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTTADA 64
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
E AL+ G G +RV+ F R +R+ ++ +D +
Sbjct: 65 EKVIDALNYTGIAPGLQ-IRVM------------FSIRDPLQRKSGMNNVFVKKLDTAIN 111
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
+++ F + CG V ++ D +++ FV+F AE A AAL+ +G+ LG + V
Sbjct: 112 AKELQAAF-TKCGRVLSCKVALDSAGNSKGYGFVQFETAEGAKAALDMNGSKLGDSEVVV 170
Query: 348 SP 349
+P
Sbjct: 171 AP 172
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-S 236
R +YV + +T+++L +F G++ C I +PN + FAFV F D + A AAL S
Sbjct: 289 RNLYVKHLPDDITDDKLREIFEPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAALRS 348
Query: 237 LAGTML 242
L G L
Sbjct: 349 LNGQPL 354
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 89/192 (46%), Gaps = 18/192 (9%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE RT+YV ++D VTEE L LF G V C++ +P S +AF+EF GA
Sbjct: 3 DESNPRTLYVGNLDPSVTEELLCALFTNIGPVNACKVIREPGSD-PYAFLEFDTHSGAAT 61
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
AL+ L + + + A P N L S I+ ++ ++ +K
Sbjct: 62 ALAAMNGRL--FLDKEMKVNWATTPGNQPKLDTSNHYH------IFVGDLSPEIETHTLK 113
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAM---AESAIAALNCSGAVLGSLPIRVS 348
F GE+ R++ D Q S AFV F AE+AI ++N G LGS IR +
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKSDAENAINSMN--GQWLGSRSIRTN 170
Query: 349 PS-KTPVRPRAP 359
S + P PRAP
Sbjct: 171 WSTRKPPPPRAP 182
>gi|940288|gb|AAA74208.1| protein localized in the nucleoli of pea nuclei; ORF; putative
[Pisum sativum]
Length = 611
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 87/182 (47%), Gaps = 14/182 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+T++V ++ V + + F CG+VVD R+ D + + F VEF E A++AL L
Sbjct: 355 KTLFVGNLSFSVQRSDIESFFQECGEVVDVRLASDEDGRFKGFGHVEFATAEAAQSALEL 414
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRS---EDEREMCSRTIYCTNIDKKVTQGDIKL 294
G L VR+ +A F P S ++ S+T++ DK + + +I+
Sbjct: 415 NGQELLQRGVRL-----DLARERGAFTPNSTGNQNSGRGQSQTVFVRGFDKSLGEDEIRA 469
Query: 295 FFE---SVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSP 349
E + CG+ R+ + DY +S A+++F ++S A+ G+ L P+ +
Sbjct: 470 KLEQHFASCGQASRVSIPKDYDTGYSKGFAYMDFKDSDSFNKAIELHGSELDGYPLSIDE 529
Query: 350 SK 351
+K
Sbjct: 530 AK 531
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
S+T++ N+ V + DI+ FF+ CGEV +RL D + VEFA AE+A +AL
Sbjct: 354 SKTLFVGNLSFSVQRSDIESFFQE-CGEVVDVRLASDEDGRFKGFGHVEFATAEAAQSAL 412
Query: 334 NCSGAVLGSLPIRV 347
+G L +R+
Sbjct: 413 ELNGQELLQRGVRL 426
>gi|157870420|ref|XP_001683760.1| poly(A)-binding protein 3 [Leishmania major strain Friedlin]
gi|68126827|emb|CAJ04400.1| poly(A)-binding protein 3 [Leishmania major strain Friedlin]
Length = 544
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 127 GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRT----VY 182
G+GY N F D + T G + G++ R + +D + R++ V+
Sbjct: 52 GYGYVN-FQTTADAEKVIDALNYT-----GIAPGRQ---IRVMFSIRDPLQRKSGMNNVF 102
Query: 183 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAGTM 241
V +D + ++L F CG+V+ C++ D + + FV+F +G +AAL + G+
Sbjct: 103 VKKLDTAINAKELQAAFSKCGRVLSCKVALDSAGNSKGYGFVQFETADGTKAALEMNGSK 162
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCTNIDKKVTQGDIKLFFES 298
LG S+ +AP R D M + R IY NI T+ D+K E
Sbjct: 163 LG-------DSEVVVAP-----FVRRVDREAMAAKSFRNIYIKNITASATEADVKAIVEE 210
Query: 299 VCGEVQRLRLLGDYQHSTR---IAFVEFAMAESAIAALNCS 336
G+V L L + T+ +AF E A AIAALN S
Sbjct: 211 F-GKVDSLFLSEHARFPTKFALVAFEEHQAAVQAIAALNES 250
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 22/180 (12%)
Query: 178 RRTVYVSD--IDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEF---TDEEG 230
R +VYV D ID EE + LF T VV ++C D L + +V F D E
Sbjct: 7 RTSVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTTADAEK 66
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
AL+ G G +RV+ F R +R+ ++ +D +
Sbjct: 67 VIDALNYTGIAPG-RQIRVM------------FSIRDPLQRKSGMNNVFVKKLDTAINAK 113
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSP 349
+++ F S CG V ++ D +++ FV+F A+ AAL +G+ LG + V+P
Sbjct: 114 ELQAAF-SKCGRVLSCKVALDSAGNSKGYGFVQFETADGTKAALEMNGSKLGDSEVVVAP 172
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-S 236
R +Y+ + +T+++L +F G++ C I +PN L+ FAFV F D++ A AAL S
Sbjct: 289 RNLYIKHLPDDITDDRLREIFEPFGKITSCAIMKEPNGTLKGFAFVCFEDKQHASAALRS 348
Query: 237 LAGTML 242
L G L
Sbjct: 349 LNGHPL 354
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 19/192 (9%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++DQ VTE+ L LF G V C+I + +S +AF+E+ + A+
Sbjct: 3 DEAYPKTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSD-PYAFIEYASHQSAQT 61
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
AL+ L + + + A +P N P+++ + I+ ++ ++ ++
Sbjct: 62 ALAAMNKRL--FLKKEIKVNWATSPGN---QPKTDTSQH---HHIFVGDLSPEIETETLR 113
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 348
F GE+ R++ D Q S AFV F A AE+AI +N G LGS IR +
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQMMN--GQWLGSRSIRTN 170
Query: 349 PSKTPVRPRAPR 360
S +P APR
Sbjct: 171 WSTR--KPPAPR 180
>gi|348524300|ref|XP_003449661.1| PREDICTED: hypothetical protein LOC100695937 [Oreochromis
niloticus]
Length = 459
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T EQL F G V R+ GD RFAFVEF ++E AL
Sbjct: 163 IRRTVYVGNLNSQTTTAEQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQESVARAL 222
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+L G M G P++V S AI
Sbjct: 223 TLNGVMFGDRPLKVNHSNNAI 243
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T + L F G+V+ +R+ GD TR AFVEF ES AL
Sbjct: 165 RTVYVGNLNSQTTTAEQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQESVARALTL 224
Query: 336 SGAVLGSLPIRV 347
+G + G P++V
Sbjct: 225 NGVMFGDRPLKV 236
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 93/194 (47%), Gaps = 22/194 (11%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L TLF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 DESHPKTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKIIREPGND-PYAFVEFTNHQSAST 61
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
AL+ L + + + A +P N P+ + I+ ++ ++ ++
Sbjct: 62 ALAAMNKRL--FLDKEMKVNWATSPGN---QPKQDTSNH---HHIFVGDLSPEIETETLR 113
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 348
F GE+ R++ D Q S AFV F A AE+AI A+N G LGS IR +
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMN--GQWLGSRSIRTN 170
Query: 349 PSKTPVRPRAPRPP 362
S R P PP
Sbjct: 171 WST-----RKPPPP 179
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 22/187 (11%)
Query: 163 RMNCRTS---NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
++N TS +QD ++V D+ ++ E L F G++ +CRI DP ++
Sbjct: 77 KVNWATSPGNQPKQDTSNHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKS 136
Query: 220 --FAFVEFTDEEGARAAL-SLAGTMLGFYPVRV-------LPSKTAIA---PVNPTFLPR 266
+AFV F + A A+ ++ G LG +R P KT A PTF
Sbjct: 137 KGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPKTEKAAQRAKQPTF-DE 195
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 326
++ + T+YC +T+ ++ F S G +Q +R+ D + AF++FA
Sbjct: 196 VYNQSSPTNCTVYCGGFTTGLTEDLMQKTF-SQFGVIQDIRVFKDKGY----AFIKFATK 250
Query: 327 ESAIAAL 333
ESA A+
Sbjct: 251 ESATHAI 257
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 96/193 (49%), Gaps = 21/193 (10%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
+E +T+YV ++D VTEE L TLF G V C+I + S+ FAF+E+ + + A+
Sbjct: 3 EESYPKTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRE-TSIDPFAFIEYANHQSAQT 61
Query: 234 ALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL+ + M +RV + +A P+++ + I+ ++ ++ +
Sbjct: 62 ALAAMNKRMFLKKEIRVNWATSAGN------QPKTDTSQH---HHIFVGDLSPEIDTETL 112
Query: 293 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRV 347
+ F GE+ R++ D Q S AFV F A AE+AIA +N G LGS IR
Sbjct: 113 REAFAPF-GEISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIAMMN--GQWLGSRSIRT 169
Query: 348 SPSKTPVRPRAPR 360
+ S +P APR
Sbjct: 170 NWSTR--KPPAPR 180
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 76/187 (40%), Gaps = 20/187 (10%)
Query: 163 RMNCRTSNAQQ---DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
R+N TS Q D ++V D+ ++ E L F G++ +CRI DP ++
Sbjct: 77 RVNWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETLREAFAPFGEISNCRIVRDPQTLKS 136
Query: 220 --FAFVEFTDEEGARAALSLA-GTMLGFYPVRV-LPSKTAIAP------VNPTFLPRSED 269
+AFV F + A A+++ G LG +R ++ AP + P E+
Sbjct: 137 RGYAFVSFVKKAEAENAIAMMNGQWLGSRSIRTNWSTRKPPAPRENSKGIKSGKTPGFEE 196
Query: 270 EREMCS---RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 326
S T+YC ++ + G + R+ D + AF+ FA
Sbjct: 197 IYNNTSPTNTTVYCGGFPPNAITDELIQKHFAQFGHINDTRVFKDKGY----AFIRFASK 252
Query: 327 ESAIAAL 333
ESA A+
Sbjct: 253 ESAARAI 259
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 94/194 (48%), Gaps = 18/194 (9%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V E+ L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 DEAYPKTLYVGNLDISVQEDLLCALFSQIGPVKGCKIIREPGND-PYAFVEFTNHQSAST 61
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
AL + + + + A +P N P+++ I+ ++ ++ ++
Sbjct: 62 ALIAMNKRV--FLDKEMKVNWATSPGN---QPKTDTSNH---HHIFVGDLSPEIETDTLR 113
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 348
F GE+ R++ D Q S AFV F A AE+AI A+N G LGS IR +
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMN--GQWLGSRSIRTN 170
Query: 349 PS-KTPVRPRAPRP 361
S + P PRA +P
Sbjct: 171 WSTRKPPPPRAEKP 184
>gi|242021493|ref|XP_002431179.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
gi|212516428|gb|EEB18441.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
Length = 403
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 95/194 (48%), Gaps = 20/194 (10%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
+E +T+YV ++D VTE+ L TLF G V C+I +PN+ +AFVEF + + A
Sbjct: 5 EENYPKTLYVGNLDVSVTEDLLCTLFSQIGSVKGCKIIREPNND-PYAFVEFVNHQAAST 63
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 292
AL + VL + VN P ++ +++ S I+ ++ ++ +
Sbjct: 64 AL------IAMNKRHVLEKEIK---VNWATSPGNQPKQDTSSHHHIFVGDLSPEIEMHTL 114
Query: 293 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRV 347
+ F GE+ R++ D Q S AFV F A AESAI A+N G LG+ IR
Sbjct: 115 REAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKAEAESAIHAMN--GQWLGNRSIRT 171
Query: 348 SPS-KTPVRPRAPR 360
+ S + P PR R
Sbjct: 172 NWSTRKPPPPRTER 185
>gi|443735038|gb|ELU18893.1| hypothetical protein CAPTEDRAFT_226786 [Capitella teleta]
Length = 518
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
IRRT++V ++D T EQL F G+V R+ GD RFAFVEFT++ AL
Sbjct: 165 IRRTIFVGNLDSISTPEQLLQFFTQAGEVKYVRMAGDETLPTRFAFVEFTEQASLLKALV 224
Query: 237 LAGTMLGFYPVRVLPSKTAI 256
L G++ PVRV S AI
Sbjct: 225 LNGSLFSGRPVRVNHSNVAI 244
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 92/234 (39%), Gaps = 63/234 (26%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP---NSVLRFAFVEFTDEEGARAAL 235
+ + VS++ + EQ+ TLF G++ + ++ D + R +++F+ E A AL
Sbjct: 8 QVIQVSNVAPTASREQMKTLFTYIGRIEELKLFPDEFTETNQPRVCYIKFSKSEEAGVAL 67
Query: 236 SLAGTML------------GFYP-----------------------------------VR 248
L+ T+ G P V
Sbjct: 68 HLSNTVFVDRALMVVPVADGTIPDESKALQLSPATAASIGGASGKAKPSGLPSHVTNQVI 127
Query: 249 VLPSKTAIAPVNPTF----------LPRSEDEREM--CSRTIYCTNIDKKVTQGDIKLFF 296
V+ K I ++P LP D ++ RTI+ N+D T + FF
Sbjct: 128 VVNGKQMIQTIDPQLSAMNLPSYPLLPGGTDPSKVDEIRRTIFVGNLDSISTPEQLLQFF 187
Query: 297 ESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 350
+ GEV+ +R+ GD TR AFVEF S + AL +G++ P+RV+ S
Sbjct: 188 -TQAGEVKYVRMAGDETLPTRFAFVEFTEQASLLKALVLNGSLFSGRPVRVNHS 240
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 18/175 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D++ VT+ QL LF GQVV R+C D NS L +A+V F++ A AL
Sbjct: 38 SLYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMDAARALE- 96
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
ML F P+ P + + +P+ R S I+ N+DK + + F
Sbjct: 97 ---MLNFVPLNNKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKTIDNKTLHDTFS 146
Query: 298 SVCGEVQRLRLLGDYQHSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVSP 349
+ + D S FV++ A+SA+ +LN G ++ P+ V P
Sbjct: 147 AFGAILSCKVATDDMGQSKGFGFVQYEKEEFAQSAMKSLN--GMLINDKPVYVGP 199
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 220
KRR +A D+ + +Y+ ++D ++++QL LF T G++ C++ D N V +
Sbjct: 302 KRRFEQSMKDAA-DKYQGQNLYLKNLDDGISDDQLRELFSTFGKITSCKVMRDQNGVSKG 360
Query: 221 A-FVEF-TDEEGARAALSLAGTMLGFYPVRV 249
+ FV F T EE ++A + G ML P+ V
Sbjct: 361 SGFVAFSTREEASQAITEMNGKMLSGKPLYV 391
>gi|224112839|ref|XP_002316306.1| predicted protein [Populus trichocarpa]
gi|222865346|gb|EEF02477.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 10/178 (5%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEFTDEEGAR 232
E I VYV I TE+ + + F CG + VDC D A + F E A+
Sbjct: 191 EDIADRVYVGGIPYYSTEDDIRSFFEGCGTITEVDCMTFPDSGKFRGIAIISFKTEAAAK 250
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL L G+ +G + +++ P KT P F P E +R IY N+ +T+ D+
Sbjct: 251 RALDLDGSDMGGFYLKIQPYKTTKVNKEPNFAPGI---VEGYNR-IYVGNLSWDITEDDL 306
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAF--VEFAMAESAIAALNCSGAVLGSLPIRVS 348
K FF S C ++ +R D + + V+F+ +S + AL ++ PI++S
Sbjct: 307 KKFF-SDC-KISSIRFGMDKETGEFRGYGHVDFSDNDSLVKALKLDQRIVCGRPIKIS 362
>gi|410948711|ref|XP_003981074.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Felis catus]
Length = 510
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|410948713|ref|XP_003981075.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Felis catus]
Length = 509
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|426246381|ref|XP_004016973.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Ovis aries]
gi|426246383|ref|XP_004016974.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Ovis aries]
Length = 516
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 336 SGAVLGSLPIRVSPS 350
+G + G P++++ S
Sbjct: 126 NGVMFGDRPLKINHS 140
>gi|426246385|ref|XP_004016975.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Ovis aries]
Length = 515
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|449278700|gb|EMC86491.1| Splicing factor, arginine/serine-rich 12 [Columba livia]
Length = 517
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 242 LGFYPVRVL-PSKTAIA-----PVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
LG P L P+ TA+ P+ P DE RT+Y N++ + T D L
Sbjct: 29 LGAIPAAALDPNITALGEIPQPPIMGNVDPSKIDE---IRRTVYVGNLNSQTTTADQLLE 85
Query: 296 FESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 350
F GEV+ +R+ GD TR AFVEFA S AL +G + G P++++ S
Sbjct: 86 FFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHS 140
>gi|426384534|ref|XP_004058817.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Gorilla gorilla gorilla]
Length = 509
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|395455051|ref|NP_001257421.1| splicing regulatory glutamine/lysine-rich protein 1 isoform c [Homo
sapiens]
Length = 507
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|441658628|ref|XP_004091274.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 509
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|426384530|ref|XP_004058815.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Gorilla gorilla gorilla]
gi|426384532|ref|XP_004058816.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Gorilla gorilla gorilla]
Length = 510
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 336 SGAVLGSLPIRVSPS 350
+G + G P++++ S
Sbjct: 126 NGVMFGDRPLKINHS 140
>gi|21040255|ref|NP_631907.1| splicing regulatory glutamine/lysine-rich protein 1 isoform b [Homo
sapiens]
gi|37537968|sp|Q8WXA9.1|SREK1_HUMAN RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=Serine/arginine-rich-splicing regulatory
protein 86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12; AltName: Full=Splicing
regulatory protein 508; Short=SRrp508
gi|18307966|gb|AAL67778.1|AF459094_1 splicing factor, arginine/serine-rich 12 [Homo sapiens]
gi|85662678|gb|AAI12344.1| SFRS12 protein [Homo sapiens]
gi|119571715|gb|EAW51330.1| splicing factor, arginine/serine-rich 12, isoform CRA_c [Homo
sapiens]
gi|127801393|gb|AAH67770.1| Splicing factor, arginine/serine-rich 12 [Homo sapiens]
Length = 508
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 336 SGAVLGSLPIRVSPS 350
+G + G P++++ S
Sbjct: 126 NGVMFGDRPLKINHS 140
>gi|332233720|ref|XP_003266051.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Nomascus leucogenys]
gi|441658625|ref|XP_004091273.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 510
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 336 SGAVLGSLPIRVSPS 350
+G + G P++++ S
Sbjct: 126 NGVMFGDRPLKINHS 140
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 19/192 (9%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
+E +T+YV ++DQ VTE+ L LF G V C+I + +S +AF+E+ + + A+
Sbjct: 3 EEAYPKTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSD-PYAFIEYANHQSAQT 61
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
AL+ L + + + A +P N P+++ + I+ ++ ++ ++
Sbjct: 62 ALAAMNKRL--FLKKEIKVNWATSPGN---QPKTDTSQH---HHIFVGDLSPEIETETLR 113
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 348
F GE+ R++ D Q S AFV F A AE+AI +N G LGS IR +
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMN--GQWLGSRSIRTN 170
Query: 349 PSKTPVRPRAPR 360
S +P APR
Sbjct: 171 WSTR--KPPAPR 180
>gi|114599978|ref|XP_001162417.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Pan troglodytes]
Length = 510
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 336 SGAVLGSLPIRVSPS 350
+G + G P++++ S
Sbjct: 126 NGVMFGDRPLKINHS 140
>gi|338718814|ref|XP_003363893.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Equus caballus]
Length = 512
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|74140797|dbj|BAC29709.2| unnamed protein product [Mus musculus]
Length = 401
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 128
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 129 NGVMFGDRPLKI 140
>gi|440908499|gb|ELR58509.1| Splicing factor, arginine/serine-rich 12, partial [Bos grunniens
mutus]
Length = 534
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 82 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 141
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 142 AFNGVMFGDRPLKINHSNNAI 162
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 84 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 143
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 144 NGVMFGDRPLKI 155
>gi|67968786|dbj|BAE00750.1| unnamed protein product [Macaca fascicularis]
Length = 510
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 336 SGAVLGSLPIRVSPS 350
+G + G P++++ S
Sbjct: 126 NGVMFGDRPLKINHS 140
>gi|26336164|dbj|BAC31767.1| unnamed protein product [Mus musculus]
Length = 317
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 44 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 103
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 104 AFNGVMFGDRPLKINHSNNAI 124
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 234 ALSLAGTMLGFYPVRVL-PSKTAIAPV-NPTFL----PRSEDEREMCSRTIYCTNIDKKV 287
+L ++ + LG P L P+ T + + P + P DE RT+Y N++ +
Sbjct: 1 SLGVSLSSLGAIPAAALDPNITTLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQT 57
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
T D L F GEV+ +R+ GD TR AFVEFA S AL +G + G P+++
Sbjct: 58 TTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 117
Query: 348 SPS 350
+ S
Sbjct: 118 NHS 120
>gi|440632886|gb|ELR02805.1| hypothetical protein GMDG_05742 [Geomyces destructans 20631-21]
Length = 575
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE +RTV+V + ++ ++L F G Q+V R+ G V +VEF +
Sbjct: 172 EDERDKRTVFVQQLAARLRSKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKN 228
Query: 228 EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
EE AA+ L G L P+ ++ T P S + ++ +Y NI +
Sbjct: 229 EESVAAAIQLTGQKLLGIPIIAQLTEAEKNRQVRTAEPASNNPNQIPFHRLYVGNIHFSI 288
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPI 345
T+GD++ FE GE++ ++L + Q +R FV+F A AL +G L PI
Sbjct: 289 TEGDLQNVFEPF-GELEFVQLQKEDQGRSRGYGFVQFRDPHQAREALEKMNGFDLAGRPI 347
Query: 346 RV 347
RV
Sbjct: 348 RV 349
>gi|432104582|gb|ELK31194.1| Splicing regulatory glutamine/lysine-rich protein 1 [Myotis
davidii]
Length = 614
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 143 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 202
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 203 AFNGVMFGDRPLKINHSNNAI 223
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 145 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 204
Query: 336 SGAVLGSLPIRVSPS 350
+G + G P++++ S
Sbjct: 205 NGVMFGDRPLKINHS 219
>gi|27369842|ref|NP_766180.1| splicing regulatory glutamine/lysine-rich protein 1 [Mus musculus]
gi|37537951|sp|Q8BZX4.1|SREK1_MOUSE RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=Serine/arginine-rich-splicing regulatory
protein 86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12
gi|26329009|dbj|BAC28243.1| unnamed protein product [Mus musculus]
gi|47682645|gb|AAH70460.1| Splicing factor, arginine/serine-rich 12 [Mus musculus]
Length = 494
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AAL T LG P L + V+P+ + DE RT+Y N++ + T D
Sbjct: 38 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 85
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
L F GEV+ +R+ GD TR AFVEFA S AL +G + G P+++
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 140
>gi|39645085|gb|AAH63761.1| Sfrs12 protein, partial [Mus musculus]
Length = 407
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 128
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 129 NGVMFGDRPLKI 140
>gi|341038993|gb|EGS23985.1| RNA splicing factor (pad-1)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 594
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 231
DE RRTV+V + ++ +L F G V + +I D N +VEF EE
Sbjct: 225 DERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKSEESV 284
Query: 232 RAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
AAL L G L P+ V P+ K A P S + +Y NI +T
Sbjct: 285 AAALQLTGQKLLGIPIIVQPTEAEKNRQARTTSGHHPNS-----VPFHRLYVGNIHFSIT 339
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIR 346
+ D++ FE GE++ ++L D +R FV+F A +A AL +G L PIR
Sbjct: 340 ETDLQHVFEPF-GELEFVQLQKDENGRSRGYGFVQFRDAANAREALEKMNGFDLAGRPIR 398
Query: 347 V 347
V
Sbjct: 399 V 399
>gi|9910564|ref|NP_064477.1| splicing regulatory glutamine/lysine-rich protein 1 [Rattus
norvegicus]
gi|37537914|sp|Q9JKL7.1|SREK1_RAT RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=SR-related protein of 86 kDa; AltName:
Full=Serine/arginine-rich-splicing regulatory protein
86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12
gi|7158880|gb|AAF37578.1|AF234765_1 serine-arginine-rich splicing regulatory protein SRRP86 [Rattus
norvegicus]
Length = 494
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AAL T LG P L + V+P+ + DE RT+Y N++ + T D
Sbjct: 38 AALDPNITALGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 85
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
L F GEV+ +R+ GD TR AFVEFA S AL +G + G P+++
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 140
>gi|149059244|gb|EDM10251.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Rattus
norvegicus]
Length = 494
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 12/115 (10%)
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AAL T LG P L + V+P+ + DE RT+Y N++ + T D
Sbjct: 38 AALDPNITALGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 85
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
L F GEV+ +R+ GD TR AFVEFA S AL +G + G P+++
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 140
>gi|260821314|ref|XP_002605978.1| hypothetical protein BRAFLDRAFT_126567 [Branchiostoma floridae]
gi|229291315|gb|EEN61988.1| hypothetical protein BRAFLDRAFT_126567 [Branchiostoma floridae]
Length = 645
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQ-VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV ++D VT EQL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 206 IRRTVYVGNLDSATVTAEQLLNFFQQVGEVKYVRMAGDETQPTRFAFVEFADQTSVAKAL 265
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
G M G P+++ S AI
Sbjct: 266 QYNGIMFGNRPLKINHSNNAI 286
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N+D + L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 208 RTVYVGNLDSATVTAEQLLNFFQQVGEVKYVRMAGDETQPTRFAFVEFADQTSVAKALQY 267
Query: 336 SGAVLGSLPIRV 347
+G + G+ P+++
Sbjct: 268 NGIMFGNRPLKI 279
>gi|410929297|ref|XP_003978036.1| PREDICTED: uncharacterized protein LOC101067881 [Takifugu rubripes]
Length = 451
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G V R+ GD RFAFVEF+++E AL
Sbjct: 163 IRRTVYVGNLNSQTTTADQLLEFFRQVGSVKFVRMAGDETQPTRFAFVEFSEQESVARAL 222
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 223 TFNGVMFGDRPLKINHSNNAI 243
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F G V+ +R+ GD TR AFVEF+ ES AL
Sbjct: 165 RTVYVGNLNSQTTTADQLLEFFRQVGSVKFVRMAGDETQPTRFAFVEFSEQESVARALTF 224
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 225 NGVMFGDRPLKI 236
>gi|26333193|dbj|BAC30314.1| unnamed protein product [Mus musculus]
Length = 318
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 128
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 129 NGVMFGDRPLKI 140
>gi|320166417|gb|EFW43316.1| hypothetical protein CAOG_01360 [Capsaspora owczarzaki ATCC 30864]
Length = 986
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 97/237 (40%), Gaps = 18/237 (7%)
Query: 138 TDGTANTNGHTT------TRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVT 191
DG A NG T +R+R+ R +A TV+VS++D + T
Sbjct: 641 VDGGAEDNGLTALLSDARVKRQRDSDDAQAPRFTLPEKHAHDVSKDPVTVFVSNLDFKAT 700
Query: 192 EEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPVRVL 250
EE + + F G +VD R+ P R + FVEF+ E A+ AL+L + P+ V
Sbjct: 701 EEMIRSQFEQIGNIVDVRLVRKPTGRSRGYGFVEFSSPEAAQKALALDRQPVLNRPMYVS 760
Query: 251 PS----KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQ-R 305
PS K P + D +T++ N+ + D+ FE V R
Sbjct: 761 PSVDKPKDGDGPAPSRYAQDGVD-----PKTLFVRNLSSLCRRDDLVTTFEKFAKVVDVR 815
Query: 306 LRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 362
+ D + + R A+VEFA E A AL G V+ PI P + A P
Sbjct: 816 MTRHRDGRFTGR-AYVEFANEEDAKLALAADGTVVRGQPISAQVCNPPTKAAASETP 871
>gi|449514352|ref|XP_004177208.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1 [Taeniopygia guttata]
Length = 633
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 92/239 (38%), Gaps = 72/239 (30%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFT---------- 226
+ V+++ VT EQ+ TLF G + + R+ N+ L F+ +++F
Sbjct: 21 IQVTNLSSAVTSEQMRTLFGFLGDIEELRLYPPDNAPLAFSSKVCYIKFREASSVGVAQH 80
Query: 227 ----------------------DEEGARAALSLAGTM----------------------- 241
DE A + L+ A TM
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPDEAKALSLLAPAPTMTSLMPGAGLLPIPTPTPLTTLGV 140
Query: 242 ----LGFYPVRVL-PSKTAIA-----PVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
LG P L P+ TA+ P+ P DE RT+Y N++ + T D
Sbjct: 141 SLGTLGAIPAAALDPNITALGEIPQPPIMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 350
L F GEV+ +R+ GD TR AFVEFA S AL +G + G P++++ S
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHS 256
>gi|440470687|gb|ELQ39749.1| RNA-binding protein rsd1 [Magnaporthe oryzae Y34]
Length = 566
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 81/187 (43%), Gaps = 22/187 (11%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF EE
Sbjct: 169 EDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEES 228
Query: 231 ARAALSLAGTMLGFYPVRVLPS--------KTAIAPVNPTFLPRSEDEREMCSRTIYCTN 282
AAL L G L PV V P+ KT T +P +Y N
Sbjct: 229 VAAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVP---------FHRLYVGN 279
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVL 340
I +T+ D++ FE GE++ ++L D +R FV+F A A AL +G L
Sbjct: 280 IHFSITEQDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQFRDATQAREALEKMNGFDL 338
Query: 341 GSLPIRV 347
PIRV
Sbjct: 339 AGRPIRV 345
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFA 324
+EDER+ RT++ + ++ ++K FFE G V +++ D S + +VEF
Sbjct: 168 TEDERDR--RTVFVQQLAARLRTRELKEFFEK-AGPVAEAQIVKDRVSNRSKGVGYVEFK 224
Query: 325 MAESAIAALNCSGAVLGSLPIRVSPSK 351
ES AAL +G L +P+ V P++
Sbjct: 225 TEESVAAALQLTGQKLLGIPVIVQPTE 251
>gi|148686563|gb|EDL18510.1| splicing factor, arginine/serine-rich 12, isoform CRA_a [Mus
musculus]
Length = 519
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 92 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 151
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 152 AFNGVMFGDRPLKINHSNNAI 172
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 94 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 153
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 154 NGVMFGDRPLKI 165
>gi|395825410|ref|XP_003785928.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Otolemur garnettii]
Length = 617
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 91/236 (38%), Gaps = 72/236 (30%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTM----------------------- 241
E A + L+ A TM
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 242 ----LGFYPVRVL-PSKTAIAPV-NPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
LG P L P+ T + + P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNITTLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
L F GEV+ +R+ GD TR AFVEFA S AL +G + G P+++
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 253
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 17/182 (9%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
+E RT+YV ++D V+EE L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 EESNPRTLYVGNLDSSVSEELLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQC--A 59
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
A +LA + + + A +P N L S I+ ++ ++ +K
Sbjct: 60 ATALAAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHH------IFVGDLSPEIETQTLK 113
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 348
F GE+ R++ D Q S AFV F + AE+AIAA+N G LGS IR +
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMN--GQWLGSRSIRTN 170
Query: 349 PS 350
S
Sbjct: 171 WS 172
>gi|444510679|gb|ELV09695.1| Splicing regulatory glutamine/lysine-rich protein 1 [Tupaia
chinensis]
Length = 592
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 145 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 204
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 205 AFNGVMFGDRPLKINHSNNAI 225
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 147 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 206
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 207 NGVMFGDRPLKI 218
>gi|403267427|ref|XP_003925834.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Saimiri boliviensis boliviensis]
Length = 630
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRVSPS 350
+G + G P++++ S
Sbjct: 242 NGVMFGDRPLKINHS 256
>gi|355691354|gb|EHH26539.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
mulatta]
gi|355749961|gb|EHH54299.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
fascicularis]
Length = 620
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 207 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 266
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 267 AFNGVMFGDRPLKINHSNNAI 287
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 209 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 268
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 269 NGVMFGDRPLKI 280
>gi|119571716|gb|EAW51331.1| splicing factor, arginine/serine-rich 12, isoform CRA_d [Homo
sapiens]
Length = 623
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|395510384|ref|XP_003759457.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Sarcophilus harrisii]
Length = 596
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 163 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 222
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 223 AFNGVMFGDRPLKINHSNNAI 243
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 165 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 224
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 225 NGVMFGDRPLKI 236
>gi|426246379|ref|XP_004016972.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Ovis aries]
Length = 632
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|410948709|ref|XP_003981073.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Felis catus]
Length = 626
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|344272595|ref|XP_003408117.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1-like [Loxodonta
africana]
Length = 630
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|296194448|ref|XP_002744950.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Callithrix jacchus]
Length = 630
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|301609359|ref|XP_002934235.1| PREDICTED: hypothetical protein LOC100329115 [Xenopus (Silurana)
tropicalis]
Length = 566
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRT+YV +++ Q T EQL F G V R+ GD RFAFVEF+D+ AL
Sbjct: 200 IRRTIYVGNLNSQTTTAEQLLEFFKQVGDVRFVRMAGDETQPTRFAFVEFSDQNSVTRAL 259
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 260 TFNGVMFGDRPLKINHSNNAI 280
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 64/149 (42%), Gaps = 24/149 (16%)
Query: 216 SVLRFAFVEFTDEEGARAALSLAGTMLGF-YPVRVLPSKTAIAPVNPTFLPR-------- 266
SVLR VE LS+ T LG P + P T +APV P P
Sbjct: 132 SVLRREKVEV-------PLLSVPLTSLGVNLPTPLEPVITTLAPVLPALTPAIPAVADLP 184
Query: 267 --------SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI 318
+ + RTIY N++ + T + L F G+V+ +R+ GD TR
Sbjct: 185 QPPLMGNVDPTKVDEIRRTIYVGNLNSQTTTAEQLLEFFKQVGDVRFVRMAGDETQPTRF 244
Query: 319 AFVEFAMAESAIAALNCSGAVLGSLPIRV 347
AFVEF+ S AL +G + G P+++
Sbjct: 245 AFVEFSDQNSVTRALTFNGVMFGDRPLKI 273
>gi|301767860|ref|XP_002919343.1| PREDICTED: hypothetical protein LOC100466086 [Ailuropoda
melanoleuca]
gi|281341776|gb|EFB17360.1| hypothetical protein PANDA_007970 [Ailuropoda melanoleuca]
Length = 628
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|426384528|ref|XP_004058814.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Gorilla gorilla gorilla]
Length = 626
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|116089325|ref|NP_001070667.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a [Homo
sapiens]
gi|119571714|gb|EAW51329.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Homo
sapiens]
Length = 624
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|397470471|ref|XP_003806845.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Pan paniscus]
Length = 626
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|328852755|gb|EGG01898.1| hypothetical protein MELLADRAFT_91734 [Melampsora larici-populina
98AG31]
Length = 1071
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 10/175 (5%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 236
R T+YV++ + T+E + + F G++ D R S RF +V+FT + A++AL+
Sbjct: 719 RSTLYVTNFPEDATDEWIRSKFGEFGKIFDVRWPSKRFKSTRRFCYVQFTSPDSAQSALA 778
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T V PS+ ++ ++ + R +Y T + K V + D++ F
Sbjct: 779 LHNT-------EVAPSQKMSVFISDPLRKKARTDVGANDRELYITCLTKFVQEADLRKLF 831
Query: 297 ESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 350
+ G+++ +R+ L + HS AFVEF SA AAL+ + L I V+ S
Sbjct: 832 QPF-GDIKGVRMILNEDGHSKGFAFVEFETEASAKAALSMNNVELKKRRIGVTIS 885
Score = 37.7 bits (86), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 18/172 (10%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCR-ICGDPNSVLRFAFVEFTDEEGARAALSL 237
R +Y++ + + V E L LF G + R I + FAFVEF E A+AALS+
Sbjct: 811 RELYITCLTKFVQEADLRKLFQPFGDIKGVRMILNEDGHSKGFAFVEFETEASAKAALSM 870
Query: 238 AGTMLGFYPVRVLPSK---TAIAPVNP------TFLPRSEDEREMCSRTIYCTNIDKKVT 288
L + V S T++ N + L + D+R SR + + + + V
Sbjct: 871 NNVELKKRRIGVTISNSKGTSLVGKNKGKFQAESKLSSAVDQR---SRCVKVSKLPEGVQ 927
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ ++ FES G+V + + Q A VEFA A+ A A A+L
Sbjct: 928 EAIVQQAFESF-GKVLKTITYPEKQE----AVVEFANAQHAGAVFLHPEAIL 974
>gi|329663695|ref|NP_001193066.1| splicing regulatory glutamine/lysine-rich protein 1 [Bos taurus]
Length = 632
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|354474059|ref|XP_003499249.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Cricetulus griseus]
gi|344246968|gb|EGW03072.1| Splicing factor, arginine/serine-rich 12 [Cricetulus griseus]
Length = 611
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 183 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 242
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 243 AFNGVMFGDRPLKINHSNNAI 263
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 185 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 244
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 245 NGVMFGDRPLKI 256
>gi|115620271|ref|XP_781643.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Strongylocentrotus purpuratus]
Length = 890
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 10/200 (5%)
Query: 164 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAF 222
MN + ++D RTV+V ++ VTE+++ +F CG V D R+ + + + +
Sbjct: 603 MNPKKKKPERDNNDPRTVFVKNLGYNVTEKRIRKVFSECGTVRDVRMVTNYQKKFKGYCY 662
Query: 223 VEFTDEEGARAALSLAGTMLGFYPVRVLPSKT-AIAPVNPTFLPRSEDEREMCSRTIYCT 281
VEF DEE A+ AL + P+ V PSK + AP FL E +M ++ +
Sbjct: 663 VEFEDEESAKKALKKDRETINDRPMYVDPSKDRSGAPAEKKFLY----ENKMEKNKLFVS 718
Query: 282 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAI-AALNCSGAV 339
+ + +T +++ F S G+++ +R++ + +A+V+F SA A +
Sbjct: 719 GLPRTLTTEELEKTF-SKFGKLKGVRIVTFKSGVPKGLAYVDFENEASATRAVMGLDNTQ 777
Query: 340 LGSLPIRVSPSKTPVRPRAP 359
+G I V+ S P R +AP
Sbjct: 778 IGEHTITVAISNPPTR-KAP 796
>gi|410300176|gb|JAA28688.1| splicing regulatory glutamine/lysine-rich protein 1 [Pan
troglodytes]
Length = 626
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|332233718|ref|XP_003266050.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Nomascus leucogenys]
Length = 626
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|126317239|ref|XP_001381458.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Monodelphis domestica]
Length = 613
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRVSPS 350
+G + G P++++ S
Sbjct: 242 NGVMFGDRPLKINHS 256
>gi|50949479|emb|CAH10414.1| hypothetical protein [Homo sapiens]
Length = 331
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 125
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 126 NGVMFGDRPLKI 137
>gi|440487895|gb|ELQ67659.1| RNA-binding protein rsd1 [Magnaporthe oryzae P131]
Length = 570
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 81/187 (43%), Gaps = 22/187 (11%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF EE
Sbjct: 169 EDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEES 228
Query: 231 ARAALSLAGTMLGFYPVRVLPS--------KTAIAPVNPTFLPRSEDEREMCSRTIYCTN 282
AAL L G L PV V P+ KT T +P +Y N
Sbjct: 229 VAAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVP---------FHRLYVGN 279
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVL 340
I +T+ D++ FE GE++ ++L D +R FV+F A A AL +G L
Sbjct: 280 IHFSITEQDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQFRDATQAREALEKMNGFDL 338
Query: 341 GSLPIRV 347
PIRV
Sbjct: 339 AGRPIRV 345
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFA 324
+EDER+ RT++ + ++ ++K FFE G V +++ D S + +VEF
Sbjct: 168 TEDERDR--RTVFVQQLAARLRTRELKEFFEK-AGPVAEAQIVKDRVSNRSKGVGYVEFK 224
Query: 325 MAESAIAALNCSGAVLGSLPIRVSPSK 351
ES AAL +G L +P+ V P++
Sbjct: 225 TEESVAAALQLTGQKLLGIPVIVQPTE 251
>gi|351713063|gb|EHB15982.1| Splicing factor, arginine/serine-rich 12 [Heterocephalus glaber]
Length = 535
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|194223833|ref|XP_001492097.2| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Equus caballus]
Length = 628
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|402871715|ref|XP_003899799.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Papio anubis]
gi|387541364|gb|AFJ71309.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a
[Macaca mulatta]
Length = 626
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|363744206|ref|XP_424756.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Gallus gallus]
Length = 621
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 92/239 (38%), Gaps = 72/239 (30%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEF----------- 225
+ V+++ VT EQ+ TLF G + + R+ N+ L F+ +++F
Sbjct: 21 IQVTNLSSAVTSEQMRTLFGFLGDIEELRLYPPDNAPLAFSSKVCYIKFREASSVGVAQH 80
Query: 226 ---------------------TDEEGARAALSLAGTM----------------------- 241
DE A + L+ A TM
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPDEAKALSLLAPAPTMTSLMPGAGLLPIPTPTPLTTLGV 140
Query: 242 ----LGFYPVRVL-PSKTAIA-----PVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
LG P L P+ TA+ P+ P DE RT+Y N++ + T D
Sbjct: 141 SLGTLGAIPAAALDPNITALGEIPQPPIMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 350
L F GEV+ +R+ GD TR AFVEFA S AL +G + G P++++ S
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHS 256
>gi|345794152|ref|XP_544361.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Canis lupus familiaris]
Length = 626
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|431907792|gb|ELK11399.1| Splicing factor, arginine/serine-rich 12 [Pteropus alecto]
Length = 630
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|345491945|ref|XP_001599982.2| PREDICTED: nucleolar protein 12-like [Nasonia vitripennis]
Length = 613
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 38/203 (18%)
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-------------- 212
R S+ +Q + RT+YV ++ +++T + + LF G++ R+ G
Sbjct: 320 RLSSEEQAALDARTIYVGNVPKEMTVKTIKKLFRPFGEIDSIRVRGVVAEDSRMSAKVAT 379
Query: 213 -----DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPR 266
P + +V F +E+ A+ AL L G LG +RV L +K +
Sbjct: 380 ITKKMHPKVSTVYVYVAFKEEQSAKDALKLNGHKLGENTLRVDLSTKN-----------K 428
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQH--STRIAFVEFA 324
D++ R ++ NI +T+ +++ F+S CG+++ +R++ D + S I +V F
Sbjct: 429 DHDQK----RAVFLGNIPFDITEDEVRKHFDS-CGKIESVRIVKDRKSGLSRGIGYVNFE 483
Query: 325 MAESAIAALNCSGAVLGSLPIRV 347
+S AL +G L + IRV
Sbjct: 484 NQDSVTLALELNGTNLKNREIRV 506
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 153 KRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 212
K NG+ G+ + S +D +R V++ +I +TE+++ F +CG++ RI
Sbjct: 408 KLNGHKLGENTLRVDLSTKNKDHDQKRAVFLGNIPFDITEDEVRKHFDSCGKIESVRIVK 467
Query: 213 DPNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRV 249
D S L +V F +++ AL L GT L +RV
Sbjct: 468 DRKSGLSRGIGYVNFENQDSVTLALELNGTNLKNREIRV 506
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 27/196 (13%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC----GDPNSVLRFAFVEFTDEE 229
+E +T+YV ++D VTEE L TLF G V C+I DP +AF+E+
Sbjct: 3 EESYPKTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIREASNDP-----YAFIEYASHT 57
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 289
A+ A LA F+ + + A +P N P+++ + I+ ++ ++
Sbjct: 58 SAQTA--LAAMNKRFFLKKEIKVNWATSPGN---QPKTDTSQHY---HIFVGDLSPEIET 109
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLP 344
++ F GE+ R++ D Q S AFV F A AE+AI +N G LGS
Sbjct: 110 ETLREAFAPF-GEISNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMN--GQWLGSRS 166
Query: 345 IRVSPSKTPVRPRAPR 360
IR + S +P APR
Sbjct: 167 IRTNWSTR--KPPAPR 180
>gi|291395458|ref|XP_002714054.1| PREDICTED: splicing factor, arginine/serine-rich 12 [Oryctolagus
cuniculus]
Length = 618
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 91/236 (38%), Gaps = 72/236 (30%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNTPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTM----------------------- 241
E A + L+ A TM
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 242 ----LGFYPVRVL-PSKTAIAPV-NPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
LG P L P+ A+ + P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIAALGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
L F GEV+ +R+ GD TR AFVEFA S AL +G + G P+++
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 253
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 88/182 (48%), Gaps = 17/182 (9%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
+E RT+YV ++D V+EE L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 EESNPRTLYVGNLDTSVSEELLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQC--A 59
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
A +LA + + + A +P N L S I+ ++ ++ +K
Sbjct: 60 ATALAAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHH------IFVGDLSPEIETQTLK 113
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 348
F GE+ R++ D Q S AFV F + AE+AIAA+N G LGS IR +
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMN--GQWLGSRSIRTN 170
Query: 349 PS 350
S
Sbjct: 171 WS 172
>gi|297851860|ref|XP_002893811.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
gi|297339653|gb|EFH70070.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
Length = 403
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 15/160 (9%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 236
R V+V ++D+ + +QL+ +F G+V+ C++ D + V + + FV+F E A +
Sbjct: 30 RGNVFVKNLDESIDNKQLSDMFSAFGKVLSCKVVRDASGVSKGYGFVQFYSELSVNIACN 89
Query: 237 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
+ GT++ + V P F+ R + + +Y N+ + T D+K+
Sbjct: 90 VRNGTLIRNQHIHVSP-----------FVSRRQWDESRVFTNVYVKNLAETTTDDDLKMI 138
Query: 296 FESVCGEVQRLRLLGDYQHSTRI-AFVEFAMAESAIAALN 334
FE GE+ ++ D + +R+ FV F AE+A+ A++
Sbjct: 139 FEEF-GEITSAVVMKDKEGKSRMFGFVNFEKAEAAVTAID 177
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF-TDEEGARAALSLA 238
+YV ++D V +L LF G ++ C++ PN + + FVEF T EE ++A L +
Sbjct: 225 LYVKNLDYSVDNTKLQELFSEFGTIISCKVMVHPNRISKGVGFVEFSTSEEASKAMLKMN 284
Query: 239 GTMLGFYPVRV 249
G ++G P+ V
Sbjct: 285 GKVVGNKPIYV 295
>gi|389644626|ref|XP_003719945.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
gi|351639714|gb|EHA47578.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
Length = 564
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 81/187 (43%), Gaps = 22/187 (11%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF EE
Sbjct: 169 EDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEES 228
Query: 231 ARAALSLAGTMLGFYPVRVLPS--------KTAIAPVNPTFLPRSEDEREMCSRTIYCTN 282
AAL L G L PV V P+ KT T +P +Y N
Sbjct: 229 VAAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVP---------FHRLYVGN 279
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVL 340
I +T+ D++ FE GE++ ++L D +R FV+F A A AL +G L
Sbjct: 280 IHFSITEQDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQFRDATQAREALEKMNGFDL 338
Query: 341 GSLPIRV 347
PIRV
Sbjct: 339 AGRPIRV 345
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFA 324
+EDER+ RT++ + ++ ++K FFE G V +++ D S + +VEF
Sbjct: 168 TEDERDR--RTVFVQQLAARLRTRELKEFFEK-AGPVAEAQIVKDRVSNRSKGVGYVEFK 224
Query: 325 MAESAIAALNCSGAVLGSLPIRVSPSK 351
ES AAL +G L +P+ V P++
Sbjct: 225 TEESVAAALQLTGQKLLGIPVIVQPTE 251
>gi|148686566|gb|EDL18513.1| splicing factor, arginine/serine-rich 12, isoform CRA_d [Mus
musculus]
Length = 626
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 199 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 258
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 259 AFNGVMFGDRPLKINHSNNAI 279
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 201 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 260
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 261 NGVMFGDRPLKI 272
>gi|57525681|ref|NP_001003613.1| splicing regulatory glutamine/lysine-rich protein 1 [Danio rerio]
gi|50417233|gb|AAH78219.1| Zgc:100974 [Danio rerio]
Length = 512
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQ-VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G V R+ GD RFAFVEF D++ AL
Sbjct: 166 IRRTVYVGNLNSQSTTADQLLKFFKQVGDVKFVRMAGDETQPTRFAFVEFADQDSVARAL 225
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 226 TYNGVMFGDRPLKINHSNNAI 246
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Query: 247 VRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRL 306
V L + +A P+ P DE RT+Y N++ + T D L F G+V+ +
Sbjct: 142 VATLSAVSAQPPLMGNVDPSKVDE---IRRTVYVGNLNSQSTTADQLLKFFKQVGDVKFV 198
Query: 307 RLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 350
R+ GD TR AFVEFA +S AL +G + G P++++ S
Sbjct: 199 RMAGDETQPTRFAFVEFADQDSVARALTYNGVMFGDRPLKINHS 242
>gi|348553835|ref|XP_003462731.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Cavia porcellus]
Length = 556
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 236
+ V+V + +T E L F +CG++V R+ D + F +V+F D GA+AAL
Sbjct: 288 KNVFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDFVDAAGAKAALE 347
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE--DEREMCSRTIYCTNIDKKVTQGDIKL 294
+AGT L + V S P P+ + DE S+T++ N+ + TQ +
Sbjct: 348 MAGTELDGRTINVDLSAPRPPRDGPGATPKKQFNDELSAPSQTVFVGNLSFESTQDAVWE 407
Query: 295 FFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALN 334
F S G V +R+ D + A+VEF +SA A++
Sbjct: 408 SF-SDFGGVNSVRVPTDMETGRPKGFAYVEFGDVDSAKKAVD 448
>gi|289740845|gb|ADD19170.1| polyadenylate-binding protein [Glossina morsitans morsitans]
Length = 321
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 89/180 (49%), Gaps = 18/180 (10%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLA 238
+Y+ ++++ + + + F G +++C + D + R + FV+F EE ARAA+ +
Sbjct: 130 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEHGNSRGYGFVQFDSEEAARAAIEKVN 189
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 296
G + V V+ ++PR + E+E + R +Y N ++ ++ ++K F
Sbjct: 190 GILCNSQKVHVV-----------KYIPRRDREQEKATQFRNLYVKNFNEDFSEQNMKEMF 238
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAA-LNCSGAVLGSLPIRVSPSKTPV 354
E G + +++ D + S R FV F +SA+AA + +G LG + V+ + + +
Sbjct: 239 EPY-GRITSHKIMTDEEGRSKRFGFVAFENPQSALAAVIALNGKQLGDKYLYVARALSKI 297
>gi|149059243|gb|EDM10250.1| splicing factor, arginine/serine-rich 12, isoform CRA_a [Rattus
norvegicus]
Length = 610
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 183 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 242
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 243 AFNGVMFGDRPLKINHSNNAI 263
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 185 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 244
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 245 NGVMFGDRPLKI 256
>gi|391329197|ref|XP_003739062.1| PREDICTED: probable splicing factor, arginine/serine-rich 7-like
[Metaseiulus occidentalis]
Length = 399
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 91/238 (38%), Gaps = 64/238 (26%)
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL----RFAFVEFTDEEGA 231
V R + VS+I V+ EQL LF G V DCR+ L R +++F +
Sbjct: 5 VEHRVIQVSNIASGVSREQLLALFNHVGSVEDCRLYPSVEQPLENGTRICYIKFKELWSV 64
Query: 232 RAALSLAGTMLGFYPVRVLP---------------------------------------- 251
A+ L+ T+ P+ + P
Sbjct: 65 GVAMHLSNTIFMERPLLIFPMDSDQVPDEQFAIAELAPGAPISSNDEDIPELGGIRKLTN 124
Query: 252 -------SKTAIAPVNPTF----------LPR--SEDEREMCSRTIYCTNIDKKVTQGDI 292
K I ++P+ LP S++ E RTIY N+D +T +
Sbjct: 125 EISTNAAGKQVINTIDPSLALKGAPNYPALPAGLSDENVEEIRRTIYVGNLDPNLTNEIV 184
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 350
FF S CGE++ +R+ G+ S + AFVEF S A +G +LGS + VS S
Sbjct: 185 MKFF-SQCGEIKYVRMGGETGASMKHAFVEFTEQASVGNAFQFNGTLLGSRAMVVSHS 241
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
E IRRT+YV ++D +T E + F CG++ R+ G+ + ++ AFVEFT++ A
Sbjct: 164 EEIRRTIYVGNLDPNLTNEIVMKFFSQCGEIKYVRMGGETGASMKHAFVEFTEQASVGNA 223
Query: 235 LSLAGTMLG 243
GT+LG
Sbjct: 224 FQFNGTLLG 232
>gi|367034680|ref|XP_003666622.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
gi|347013895|gb|AEO61377.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
Length = 575
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 83/186 (44%), Gaps = 22/186 (11%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 231
DE RRTV+V + ++ +L F G V + +I D N +VEF +EE
Sbjct: 189 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEESV 248
Query: 232 RAALSLAGTMLGFYPVRVLPS--------KTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 283
AAL L G L PV V P+ + + + +P +P +Y NI
Sbjct: 249 AAALQLTGQKLLGIPVIVQPTEAEKNRQARNSESSGHPNSIP---------FHRLYVGNI 299
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLG 341
+T+ D++ FE GE++ ++L D +R FV+F A A AL +G L
Sbjct: 300 HFSITETDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQFRDASQAREALEKMNGFDLA 358
Query: 342 SLPIRV 347
PIRV
Sbjct: 359 GRPIRV 364
>gi|193704514|ref|XP_001944340.1| PREDICTED: hypothetical protein LOC100161931 [Acyrthosiphon pisum]
Length = 673
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 227
T ++++ E IRRT+ ++D+ VT+++L F G V R C N + R+A VE+++
Sbjct: 164 TYDSRRIEEIRRTLAAINVDENVTDDELIGFFQKAGDVKYVRWCSRENDITRYALVEYSE 223
Query: 228 EEGARAALSLAGTMLGFYPVRVLPSKTAIA 257
+ A L L G LG PV+V + AIA
Sbjct: 224 QASVIAGLKLNGVQLGSRPVQVTHATQAIA 253
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 88/233 (37%), Gaps = 64/233 (27%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL-----RFAFVEFTDEEGARA 233
+ + V++I Q T++Q+ TLF G++ D R+ V R +V++ D
Sbjct: 15 KVIQVTNIAPQATKDQMQTLFGCIGKIEDIRLYPQIRDVSVPVQSRICYVKYFDSLCVAV 74
Query: 234 ALSLAGTML----------------------------------GFYP------------V 247
A L T+ G YP +
Sbjct: 75 AQHLTNTVFIDRALIVTPYQSSVGDIPDEYRALDIANQANIVPGLYPSDPKLPAHVVNQI 134
Query: 248 RVLPSKTAIAPVNPTF----------LPRSEDER--EMCSRTIYCTNIDKKVTQGDIKLF 295
+P I +P LP + D R E RT+ N+D+ VT ++ F
Sbjct: 135 EGIPPNQVIVTNDPVLASNGLPPYPQLPITYDSRRIEEIRRTLAAINVDENVTDDELIGF 194
Query: 296 FESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVS 348
F+ G+V+ +R TR A VE++ S IA L +G LGS P++V+
Sbjct: 195 FQK-AGDVKYVRWCSRENDITRYALVEYSEQASVIAGLKLNGVQLGSRPVQVT 246
>gi|405961668|gb|EKC27433.1| Putative splicing factor, arginine/serine-rich 7 [Crassostrea
gigas]
Length = 449
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 57/125 (45%)
Query: 125 PNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVS 184
P + +N I GT T TT K + ++ + E IRRTVYV
Sbjct: 110 PGTPSWPSNVISQMTGTGLTQMITTHDPKLTALGLLQYPPLPGNTDPAKIEEIRRTVYVG 169
Query: 185 DIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGF 244
++ + VT EQL + F G+V R+ GD + A+VEFTD+ AL+ G M
Sbjct: 170 NLAKNVTTEQLLSFFSQVGEVKYVRMAGDEKQPTKNAYVEFTDQRSISTALTYNGVMFQT 229
Query: 245 YPVRV 249
P+ V
Sbjct: 230 LPISV 234
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 64/236 (27%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-------GDPNSVLRFAFVEFT 226
+++ + + +++I T++Q+ TLF G++ +C++ GD ++ + +V++
Sbjct: 3 EKITTKVIQITNIAPNATKDQMKTLFGYLGRIDECKMYPSNELPEGDTST--KVCYVKYD 60
Query: 227 DEEGARAALSLAGTM-----LGFYPV------------RVLPSKTA-IAPVNPTF----- 263
D + AL L T+ L PV ++ PS A + P P++
Sbjct: 61 DSVSSGIALHLTNTVFIDRALIIVPVMDGKIPDETTALQIAPSAIAGMIPGTPSWPSNVI 120
Query: 264 -----------------------------LPRSED--EREMCSRTIYCTNIDKKVTQGDI 292
LP + D + E RT+Y N+ K VT +
Sbjct: 121 SQMTGTGLTQMITTHDPKLTALGLLQYPPLPGNTDPAKIEEIRRTVYVGNLAKNVTTEQL 180
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVS 348
FF V GEV+ +R+ GD + T+ A+VEF S AL +G + +LPI V+
Sbjct: 181 LSFFSQV-GEVKYVRMAGDEKQPTKNAYVEFTDQRSISTALTYNGVMFQTLPISVT 235
>gi|389744897|gb|EIM86079.1| hypothetical protein STEHIDRAFT_98435 [Stereum hirsutum FP-91666
SS1]
Length = 1064
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 236
R T+YV++ ++V +E++ +F G + D R + RF +V+FT + A+A+L
Sbjct: 723 RSTLYVTNFPERVDDEEVRKIFGKYGLIFDVRWPSKKFKATRRFCYVQFTSPDAAKASLE 782
Query: 237 LAGTMLG-FYPVRVLPSKTAIAPVNPTFLPRSEDER---EMCSRTIYCTNIDKKVTQGDI 292
L G L P+ V S P + ER + +R +Y + + K + D+
Sbjct: 783 LHGHELEPNLPLNVYISN-----------PERKKERTDADANAREVYVSGLSKFADKSDL 831
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
+ F++ G ++ +R+ D Q ++ AFVEF + A+ ALN + L + + V+ S
Sbjct: 832 ERVFKTY-GPIKEIRMTVDEQGRSKGFAFVEFEQEKDALNALNANNHELKARRMAVTMSD 890
Query: 352 TPVRPRAPRPP 362
+ VR R P
Sbjct: 891 SRVRSRRKDQP 901
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 75/170 (44%), Gaps = 26/170 (15%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 239
TV+V+D+ T++ L LF CG + D +I PN+ A VEF++ E AAL+
Sbjct: 651 TVFVADLPSNTTDDDLKALFKDCGSIRDIKITSLPNT--HVATVEFSERESVPAALTKDK 708
Query: 240 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 299
+ V V RS T+Y TN ++V +++ F
Sbjct: 709 KRINGEEVAV------------HLAWRS---------TLYVTNFPERVDDEEVRKIF-GK 746
Query: 300 CGEVQRLRLLG-DYQHSTRIAFVEFAMAESAIAALNCSGAVLG-SLPIRV 347
G + +R ++ + R +V+F ++A A+L G L +LP+ V
Sbjct: 747 YGLIFDVRWPSKKFKATRRFCYVQFTSPDAAKASLELHGHELEPNLPLNV 796
>gi|74217177|dbj|BAC34905.2| unnamed protein product [Mus musculus]
Length = 513
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 183 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 242
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 243 AFNGVMFGDRPLKINHSNNAI 263
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 185 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 244
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 245 NGVMFGDRPLKI 256
>gi|384499302|gb|EIE89793.1| hypothetical protein RO3G_14504 [Rhizopus delemar RA 99-880]
Length = 292
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 16/190 (8%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
TV+V ++ T E++ T F CG V D R+ PN V FA ++FT EG +AA++L
Sbjct: 82 TVFVGQLNFDATAEEIRTHFGQCGPVSDVRLRMHPNGVKSRGFAHIDFTSAEGKQAAMAL 141
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPT-FLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
GT +RV ++ A T + P+++ ++ N+ + +K F
Sbjct: 142 DGTEFMGRTIRVDDAQPAQGRSTDTNYGPKTD--------KVFVANLSYDTDEDSLKQAF 193
Query: 297 E---SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVSPSKT 352
E ++ GE+ L + D IA+++F + A AA+ +G L PIR S
Sbjct: 194 EKFGTIVGEIG-LPISRDTGRIRGIAYIQFETEDEAEAAVKGMNGVYLDGRPIRTDFSGD 252
Query: 353 PVRPRAPRPP 362
R R P
Sbjct: 253 NDRNRLGERP 262
>gi|297294417|ref|XP_001087835.2| PREDICTED: hypothetical protein LOC697731 isoform 1 [Macaca
mulatta]
Length = 516
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|193787205|dbj|BAG52411.1| unnamed protein product [Homo sapiens]
Length = 514
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|297816826|ref|XP_002876296.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322134|gb|EFH52555.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 599
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 18/191 (9%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEF 225
T N ++D V+ + +YV I Q TE+++ + F +CG + VDC++ + + AF+ F
Sbjct: 152 TDNKEEDGVVPKKLYVGGIPYQSTEDEIRSYFRSCGVITKVDCKMRPEDGAFSGIAFITF 211
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER----EMCS--RTIY 279
E+GA+ AL+ +G R L + + P F+PR + EM +Y
Sbjct: 212 ETEDGAKRALAFDRAAMGD---RFLTIQQYVKTTTP-FVPRRKTSSGFAPEMVDGYNRVY 267
Query: 280 CTNIDKKVTQGDI-KLFFESVCGEVQ--RLRLLGDYQHSTRIAFVEFAMAESAIAALNCS 336
N+ T+ DI KLF + V V+ + + G+++ A V+F + S AL
Sbjct: 268 IGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKG---YAHVDFKDSVSVAIALKLD 324
Query: 337 GAVLGSLPIRV 347
V+ P++V
Sbjct: 325 QQVICGRPVKV 335
>gi|393212445|gb|EJC97945.1| hypothetical protein FOMMEDRAFT_97432 [Fomitiporia mediterranea
MF3/22]
Length = 1017
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 100/209 (47%), Gaps = 22/209 (10%)
Query: 156 GYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP- 214
G ++ K+R+N + + + T+YV++ ++V + + LF G + D R
Sbjct: 660 GLTKDKKRINGQEISVHL--AWQSTLYVTNFPEKVDDAYIRQLFDQFGVIFDVRWPSKKF 717
Query: 215 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC 274
+ RF +V+FT +E A+AALSL GT L P P+N F+ E ++E
Sbjct: 718 KATRRFCYVQFTSKEAAQAALSLHGTELE-------PG----LPMN-VFISNPERKKERT 765
Query: 275 -----SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAES 328
R +Y + K V + D+K F++ G V+ +R+ D + +AFVEF S
Sbjct: 766 DAGADDREVYVAGLSKFVIRDDLKKLFKTF-GPVKDIRVTKDDTGLCKGVAFVEFEDEPS 824
Query: 329 AIAALNCSGAVLGSLPIRVSPSKTPVRPR 357
A AL + + + I V+ S + VR R
Sbjct: 825 AQRALQANNHDVKNRRIAVTMSDSRVRAR 853
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 26/170 (15%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 239
TV+V+D+ TE+ L LF CG + + +I NS R A +EF D E A L+
Sbjct: 608 TVFVADLPSGATEDDLTALFKDCGDIREIKITSLANS--RVATIEFVDRESVPAGLTKDK 665
Query: 240 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 299
+ + V + T+Y TN +KV I+ F+
Sbjct: 666 KRINGQEISVHLA---------------------WQSTLYVTNFPEKVDDAYIRQLFDQF 704
Query: 300 CGEVQRLRLLG-DYQHSTRIAFVEFAMAESAIAALNCSGAVLG-SLPIRV 347
G + +R ++ + R +V+F E+A AAL+ G L LP+ V
Sbjct: 705 -GVIFDVRWPSKKFKATRRFCYVQFTSKEAAQAALSLHGTELEPGLPMNV 753
>gi|317106693|dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
Length = 642
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGA 231
++ + ++YV D++Q VTE QL LF GQ+V R+C D S L + +V + + A
Sbjct: 24 NQFVSTSLYVGDLEQNVTETQLYDLFNQLGQIVSIRVCRDLTSRRSLGYGYVNYNNVHDA 83
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
AL + L F PV P + + +PT R+ + IY N+DK +
Sbjct: 84 AQALEV----LNFTPVNGKPIRIMYSYRDPTI-------RKSGAGNIYIKNLDKAIDNKA 132
Query: 292 IKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 349
+ F S G + ++ D S FV+F ESA A++ +G +L + V P
Sbjct: 133 LHDTF-SAFGNILSCKVATDSAGQSLGYGFVQFDNEESAKNAIDKLNGMLLNDKQVYVGP 191
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+YV ++D +T+++L LF G + C++ DPN V + + FV + T EE ++A +
Sbjct: 313 LYVKNLDDSITDDKLKELFSEFGTITSCKVMRDPNGVSKGSGFVAYSTAEEASKALTEMN 372
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 373 GKMIVSKPLYV 383
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 13/178 (7%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSLA 238
VYV ++ + TEE L +F G + + D + R F FV F + ++ AR+ +L
Sbjct: 210 VYVKNLSETTTEEDLKKIFGEYGAITSAVVMRDGDGKSRCFGFVNFENPDDAARSVEALN 269
Query: 239 GTMLG---FYPVRVLPSKTAIAPVNPTF---LPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
G +Y + + F L + D+ E + +Y N+D +T +
Sbjct: 270 GKTFDEKEWYVGKAQKKSEREVELKGQFEQTLKETVDKFEGLN--LYVKNLDDSITDDKL 327
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 348
K F S G + +++ D ++ FV ++ AE A AL +G ++ S P+ V+
Sbjct: 328 KELF-SEFGTITSCKVMRDPNGVSKGSGFVAYSTAEEASKALTEMNGKMIVSKPLYVA 384
>gi|218195166|gb|EEC77593.1| hypothetical protein OsI_16552 [Oryza sativa Indica Group]
Length = 659
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 20/177 (11%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALS 236
+++YV D++ VT+ QL LF GQV+ R+C D +S L +A+V F + A AL
Sbjct: 39 QSLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALE 98
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L L F P+ P + + +P+ R S I+ N+DK + + F
Sbjct: 99 L----LNFAPLNGKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKAIDHKTLHDTF 147
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEF---AMAESAIAALNCSGAVLGSLPIRVSP 349
S G + ++ D ++ FV++ A+SAI +LN G ++ P+ V P
Sbjct: 148 -SAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLN--GMLINDKPVYVGP 201
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 220
KRR +A D+ +Y+ ++D + ++QL LF G++ C+I D N V +
Sbjct: 304 KRRFEQSMKDAA-DKYQGLNLYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGVSKG 362
Query: 221 A-FVEF-TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC 274
+ FV F T EE ++A + G M+ P+ V F R ED + M
Sbjct: 363 SGFVAFSTREEASQALTEMNGKMISGKPLYV------------AFAQRKEDRKVML 406
>gi|453087053|gb|EMF15094.1| splicing factor, CC1-like protein [Mycosphaerella populorum SO2202]
Length = 622
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 94/222 (42%), Gaps = 39/222 (17%)
Query: 147 HTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 206
H + +R+ Y G +T DE RRTV+V + ++ +L F G VV
Sbjct: 204 HGSQSDRRHSYRGGDGGNKRKTPEPTDDERDRRTVFVQQLAARLRSRELRDFFEQVGPVV 263
Query: 207 DCRICGDPNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
D +I D S +VEF DEE + A+ L G L P+ IA +
Sbjct: 264 DAQIVKDRVSGRSKGVGYVEFKDEESVQKAIGLTGQKLLGIPI--------IAQL----- 310
Query: 265 PRSEDEREMCSRT---------------IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL 309
+E E+ +RT +Y NI +T+ D+K FE GE++ +L
Sbjct: 311 --TEAEKNRQARTTEGTATQSNGVPFHRLYVGNIHFSITEADLKNVFEPF-GELEFAQLQ 367
Query: 310 GDYQHSTR----IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
+ ++ + F++ A A+ A+ +N G L PIRV
Sbjct: 368 KEENGRSKGYGFVQFIDPAQAKEALEKMN--GFELAGRPIRV 407
>gi|330920965|ref|XP_003299224.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
gi|311327182|gb|EFQ92678.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
Length = 570
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 82/185 (44%), Gaps = 14/185 (7%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEE 229
+D+ +RT++V I Q+ L T F G V++ +I D LR +VEF DEE
Sbjct: 171 EDDRDKRTIFVQQISQRAETHHLRTFFERVGPVIEAQIVKD-RVTLRSKGVGYVEFKDEE 229
Query: 230 GARAALSLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
AL L G L P+ L P+ + +Y NI VT
Sbjct: 230 SVAKALELTGQKLKGVPIIAQLAEAEKNRAARPSEGGAAPGANGAPFHRLYVGNIHFSVT 289
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGS 342
+GD++ FE G ++++ L D + R + FV+ A A++A+A +N G L
Sbjct: 290 EGDLRDIFEPF-GALEQVILQRDEANPGRSKGYGFVQFVDPAHAKNALAEMN--GFELAG 346
Query: 343 LPIRV 347
IRV
Sbjct: 347 RQIRV 351
>gi|115459296|ref|NP_001053248.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa Japonica Group]
gi|113564819|dbj|BAF15162.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|215695125|dbj|BAG90316.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 659
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 84/177 (47%), Gaps = 20/177 (11%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALS 236
+++YV D++ VT+ QL LF GQV+ R+C D +S L +A+V F + A AL
Sbjct: 39 QSLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALE 98
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L L F P+ P + + +P+ R S I+ N+DK + + F
Sbjct: 99 L----LNFAPLNGKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKAIDHKTLHDTF 147
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEF---AMAESAIAALNCSGAVLGSLPIRVSP 349
S G + ++ D ++ FV++ A+SAI +LN G ++ P+ V P
Sbjct: 148 -SAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLN--GMLINDKPVYVGP 201
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 220
KRR +A D+ +Y+ ++D + ++QL LF G++ C+I D N V +
Sbjct: 304 KRRFEQSMKDAA-DKYQGLNLYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGVSKG 362
Query: 221 A-FVEF-TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC 274
+ FV F T EE ++A + G M+ P+ V F R ED + M
Sbjct: 363 SGFVAFSTREEASQALTEMNGKMISGKPLYV------------AFAQRKEDRKAML 406
>gi|321474916|gb|EFX85880.1| hypothetical protein DAPPUDRAFT_20224 [Daphnia pulex]
Length = 346
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 17/206 (8%)
Query: 163 RMNCRTS--NA-QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
++N TS NA +QD ++V D+ ++ L F G++ DCR+ DP ++
Sbjct: 67 KVNWATSPGNAPKQDTSKHFHIFVGDLSPEIETHTLRDAFAAFGEISDCRVVRDPQTLKS 126
Query: 220 --FAFVEFTDEEGARAALS-LAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRSEDE----R 271
+ FV F + A A++ + G LG +R ++ AP + P S +E
Sbjct: 127 KGYGFVSFVKKSDAENAIAGMNGQWLGTRAIRTNWATRKPPAPKDAGSKPMSYEEVFGQS 186
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 331
+ T+YC N+ + T+ ++ F G++Q +R+ D + AF+ FA ESA
Sbjct: 187 SSTNCTVYCGNLAQGSTEEALQKIFGPY-GQIQEIRVFKDKGY----AFIRFASKESATQ 241
Query: 332 AL-NCSGAVLGSLPIRVSPSKTPVRP 356
A+ + L ++ S K P P
Sbjct: 242 AIVSVHNTDLNGQNVKCSWGKEPGEP 267
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 23/186 (12%)
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGT- 240
YV ++D VTEE + LF G V C+I +P + FVEF + A AAL+
Sbjct: 1 YVGNLDPSVTEELIMVLFGQIGTVKGCKIIHEPGHE-PYCFVEFAEHHSAAAALAAMNKR 59
Query: 241 -MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 299
+G R + A +P N P+ + + I+ ++ ++ ++ F +
Sbjct: 60 NCMG----REMKVNWATSPGN---APKQDTSKHF---HIFVGDLSPEIETHTLRDAFAAF 109
Query: 300 CGEVQRLRLLGDYQ--HSTRIAFVEFAM---AESAIAALNCSGAVLGSLPIRVSPSKTPV 354
GE+ R++ D Q S FV F AE+AIA +N G LG+ IR + +
Sbjct: 110 -GEISDCRVVRDPQTLKSKGYGFVSFVKKSDAENAIAGMN--GQWLGTRAIRTNWATR-- 164
Query: 355 RPRAPR 360
+P AP+
Sbjct: 165 KPPAPK 170
>gi|70663933|emb|CAE02947.3| OSJNBa0014K14.19 [Oryza sativa Japonica Group]
Length = 657
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 20/177 (11%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALS 236
+++YV D++ VT+ QL LF GQV+ R+C D +S L +A+V F + A AL
Sbjct: 39 QSLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALE 98
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L L F P+ P + + +P+ R S I+ N+DK + + F
Sbjct: 99 L----LNFAPLNGKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKAIDHKTLHDTF 147
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVSP 349
S G + ++ D S FV++ A+SAI +LN G ++ P+ V P
Sbjct: 148 -SAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLN--GMLINDKPVYVGP 201
>gi|194757405|ref|XP_001960955.1| GF11244 [Drosophila ananassae]
gi|190622253|gb|EDV37777.1| GF11244 [Drosophila ananassae]
Length = 307
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
R +Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 113 RKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDTEEAARAAIEK 172
Query: 238 AGTML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKL 294
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++
Sbjct: 173 VNGMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLGEEFTEQHLRE 221
Query: 295 FFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA-LNCSGAVLG 341
FE +L D S R FV + +SA+AA + G LG
Sbjct: 222 MFEPYGRITSHKLMLDDEGRSRRFGFVAYENPQSALAAVIGLHGKQLG 269
>gi|350594366|ref|XP_003134051.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1,
partial [Sus scrofa]
Length = 587
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 218 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 277
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 278 AFNGVMFGDRPLKINHSNNAI 298
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 220 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 279
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 280 NGVMFGDRPLKI 291
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 33/230 (14%)
Query: 140 GTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF 199
G NG + R +S G+R +++QD+ T++V D+ VT+ L F
Sbjct: 120 GAIMPNGGQSYRLNWATFSAGER-------SSRQDDGPDHTIFVGDLAADVTDYLLQETF 172
Query: 200 ------LTCGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLPS 252
+ +VV R+ G + FV F DE E RA + G + P+R+ P+
Sbjct: 173 RARYNSVKGAKVVIDRLTGRSKG---YGFVRFADEGEQMRAMTEMQGVLCSTRPMRIGPA 229
Query: 253 ------KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRL 306
T A + + P + E + + TI+ N+D VT ++ F S GE+ +
Sbjct: 230 TNKNPAATTQAKASYSNTPGGQSENDPNNTTIFVGNLDPNVTDDHLRQVF-SQYGELVHV 288
Query: 307 RLLGDYQHSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVSPSKTP 353
++ R FV+F + AE AI LN G +LG +R+S +TP
Sbjct: 289 KI----PSGKRCGFVQFSDRSSAEEAIRVLN--GTLLGGQNVRLSWGRTP 332
>gi|367054118|ref|XP_003657437.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
gi|347004703|gb|AEO71101.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
Length = 573
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 82/182 (45%), Gaps = 14/182 (7%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 231
DE RRTV+V + ++ +L F G V + +I D N +VEF +EE
Sbjct: 184 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEESV 243
Query: 232 RAALSLAGTMLGFYPVRVLPSKTA----IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
AAL L G L PV V P++ + + P S + +Y NI +
Sbjct: 244 AAALQLTGQKLLGIPVIVQPTEAEKNRQVRNTESSGHPNS-----VPFHRLYVGNIHFSI 298
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPI 345
T+ D++ FE GE++ ++L D +R FV+F A A AL +G L PI
Sbjct: 299 TETDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPI 357
Query: 346 RV 347
RV
Sbjct: 358 RV 359
>gi|217074874|gb|ACJ85797.1| unknown [Medicago truncatula]
Length = 494
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 22/181 (12%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTD-EEG 230
+++ ++YV D+D VT+ QL LF GQVV RIC D S L + +V F++ +
Sbjct: 19 NQLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDA 78
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
A+A L T L P+R++ S R R+ + I+ N+D+ +
Sbjct: 79 AKAMDVLNFTPLNNKPIRIMYSH------------RDPSVRKSGAANIFIKNLDRAI--- 123
Query: 291 DIKLFFE--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIR 346
D K ++ S+ G + ++ D ++ FV+F ESA +A++ +G +L P+
Sbjct: 124 DHKALYDTFSIFGNILSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVY 183
Query: 347 V 347
V
Sbjct: 184 V 184
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 231
D+ +Y+ ++D VT+E+L+ LF G V C+I DP + R + FV F T EE
Sbjct: 301 DKFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSCKILRDPQGISRGSGFVAFSTPEEAT 360
Query: 232 RAALSLAGTMLGFYPVRVLPSK 253
RA + G M+ P+ V P++
Sbjct: 361 RALAEMNGKMVAGKPLYVAPAQ 382
>gi|28703790|gb|AAH47322.1| Similar to expressed sequence AI450757, partial [Homo sapiens]
Length = 386
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|380792715|gb|AFE68233.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a,
partial [Macaca mulatta]
Length = 394
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 182 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 241
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 242 NGVMFGDRPLKI 253
>gi|357465579|ref|XP_003603074.1| Poly(A)-binding protein [Medicago truncatula]
gi|355492122|gb|AES73325.1| Poly(A)-binding protein [Medicago truncatula]
Length = 622
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 22/181 (12%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTD-EEG 230
+++ ++YV D+D VT+ QL LF GQVV RIC D S L + +V F++ +
Sbjct: 19 NQLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDA 78
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
A+A L T L P+R++ S R R+ + I+ N+D+ +
Sbjct: 79 AKAMDVLNFTPLNNKPIRIMYSH------------RDPSVRKSGAANIFIKNLDRAI--- 123
Query: 291 DIKLFFE--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIR 346
D K ++ S+ G + ++ D ++ FV+F ESA +A++ +G +L P+
Sbjct: 124 DHKALYDTFSIFGNILSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVY 183
Query: 347 V 347
V
Sbjct: 184 V 184
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 231
D+ +Y+ ++D VT+E+L+ LF G V C+I DP + R + FV F T EE
Sbjct: 301 DKFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSCKILRDPQGISRGSGFVAFSTPEEAT 360
Query: 232 RAALSLAGTMLGFYPVRVLPSK 253
RA + G M+ P+ V P++
Sbjct: 361 RALAEMNGKMVAGKPLYVAPAQ 382
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 15/188 (7%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEF 225
+S++Q+D +TV+V + V + LA F CG+VV R+ D N+ F FVEF
Sbjct: 313 SSDSQEDS---KTVFVGRLSWNVDNDWLAQEFADCGEVVSARVQMDRNTGKSRGFGFVEF 369
Query: 226 TDEEGARAALSLAGTM-LGFYPVRVLPSKTAIAPVNPTFLPRS-EDEREMCSRTIYCTNI 283
EGA AA++L G + V + KT+ P +P ++ D S ++ N+
Sbjct: 370 ATAEGANAAVALNGQKEIDGRAVNL--DKTSAKPADPERRAKAFGDSTSAPSSVLFVGNV 427
Query: 284 DKKVTQ-GDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAMAESAIAALN-CSGAV 339
+T+ G ++F E GEV+ +RL D Q +VEF ESA A G
Sbjct: 428 SFDMTEDGLWEVFAE--YGEVKSVRLPTDRDTQRLKGYGYVEFVDVESAKKAFEGARGMD 485
Query: 340 LGSLPIRV 347
+G IR+
Sbjct: 486 VGGRTIRL 493
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 93/224 (41%), Gaps = 33/224 (14%)
Query: 158 SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF------LTCGQVVDCRIC 211
S G+R R+ +DE RTV+V + ++ ++L F + Q+V RI
Sbjct: 159 SPGRR---SRSPQLNEDERDSRTVFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRIS 215
Query: 212 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK---------TAIAPVNPT 262
G V +VEF DEE + AL L G L P+ V ++ T NP
Sbjct: 216 GRSKGV---GYVEFKDEETVQKALQLTGKPLAGIPIIVKLTEAEKNRQARNTESTSGNPN 272
Query: 263 FLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFV 321
+P +Y NI VT+ D++ FE GE++ ++L D +R FV
Sbjct: 273 SVP---------FHRLYVGNIHFNVTEQDLQAVFEPF-GELEYVQLQKDDNGRSRGYGFV 322
Query: 322 EFAMAESAIAAL-NCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
+F A A AL +G L PIRV P + +H
Sbjct: 323 QFRDATQAREALEKMNGFDLAGRPIRVGLGNDKFTPESTANLMH 366
>gi|326503120|dbj|BAJ99185.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 724
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 86/192 (44%), Gaps = 22/192 (11%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-GDPNSVLRFAFVEFTDEEGARAALSL 237
+T++V ++ V +++ F G+V D R D S FA VEF E A+ A L
Sbjct: 465 KTLFVGNLSYNVENDEVKQFFGEAGEVSDIRFATADDGSFKGFAHVEFATTEAAQKAYEL 524
Query: 238 AGTMLGFYPVRV--LPSKTAIAPV----NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
G L PVR+ + AI P N +F ++ S T + D + + +
Sbjct: 525 NGHDLSGRPVRLDFARERGAITPGSGRDNSSF------KKSGQSNTAFVRGFDSSLGEDE 578
Query: 292 IKLFFE---SVCGEVQRLRLLGDYQHSTR--IAFVEFAMAESAIAALNCSGAVLGSLPIR 346
I+ + S CG + R+ + DY+ T IA+VEF S AL +G+ +G +
Sbjct: 579 IRSSLQEHFSSCGAIGRVSIPKDYETGTSKGIAYVEFTDGNSLPKALELNGSNIGEFSLF 638
Query: 347 VSPSKTPVRPRA 358
V +K PRA
Sbjct: 639 VDEAK----PRA 646
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 17/188 (9%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+EE L LF T G V +C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEELLIALFGTMGAVKNCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
AL+ L + + + A +P N P+++ I+ ++ ++ ++
Sbjct: 61 ALTAMNKRL--FLEKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLR 112
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 348
F GE+ R++ D Q S AFV F A AE+AI A+N G +GS IR +
Sbjct: 113 EAFAPF-GEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRTN 169
Query: 349 PSKTPVRP 356
S + P
Sbjct: 170 WSTRKLPP 177
>gi|340714141|ref|XP_003395590.1| PREDICTED: hypothetical protein LOC100644519 [Bombus terrestris]
Length = 628
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 35/192 (18%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR------------------- 219
RT++V ++ + VT++QL LF G++ R+ G + L
Sbjct: 342 RTIFVGNLPKDVTKKQLQKLFKQFGKIDAIRLRGKISKSLNIPKRVAAITNDLHPKMKSV 401
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 279
+A++ F EE + ALS+ GT VRV S +S D+ E ++++
Sbjct: 402 YAYIRFESEESTKKALSINGTKFEGNYVRVDMS------------TKSNDKYE-TKKSVF 448
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF--VEFAMAESAIAALNCSG 337
N+ V ++ F+ CGE+Q +R++ D Q F V F ++ AL G
Sbjct: 449 IGNLHFNVDDDSVRNHFKR-CGEIQSVRIIRDNQTGVGKGFGYVNFKSEDAVALALELDG 507
Query: 338 AVLGSLPIRVSP 349
+ + +RV P
Sbjct: 508 TTILNREVRVKP 519
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 83/190 (43%), Gaps = 25/190 (13%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF EE
Sbjct: 203 EDERDRRTVFVQQLAARLRTRELKDFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFRSEES 262
Query: 231 ARAALSLAGTMLGFYPV-----------RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 279
AAL L G L PV +V + A + N T +P +Y
Sbjct: 263 VTAALQLTGQKLLGIPVIVQMTEAEKNRQVRSTAEATSNGNSTGVP---------FHRLY 313
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSG 337
NI +T+ D++ FE GE++ ++L D +R FV+F ++ A AL +G
Sbjct: 314 VGNIHFSITESDLRNVFEPF-GELEFVQLQKDDTGRSRGYGFVQFRDSDQAREALEKMNG 372
Query: 338 AVLGSLPIRV 347
L PIRV
Sbjct: 373 FDLAGRPIRV 382
>gi|116200107|ref|XP_001225865.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
gi|88179488|gb|EAQ86956.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 86/198 (43%), Gaps = 22/198 (11%)
Query: 162 RRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLR 219
R R ++ DE RRTV+V + ++ +L F G V + +I D N
Sbjct: 166 RNSTPRDTSPTGDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKG 225
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS--------KTAIAPVNPTFLPRSEDER 271
+VEF EE AAL L G L PV V P+ + + + +P +P
Sbjct: 226 VGYVEFKGEESVAAALQLTGQKLLGIPVIVQPTEAEKNRQVRNSESSGHPNSVP------ 279
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAI 330
+Y NI +T+ D++ FE GE++ ++L D +R FV+F A A
Sbjct: 280 ---FHRLYVGNIHFSITETDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQFRDAGQAR 335
Query: 331 AAL-NCSGAVLGSLPIRV 347
AL +G L PIRV
Sbjct: 336 EALEKMNGFDLAGRPIRV 353
>gi|296475869|tpg|DAA17984.1| TPA: splicing factor, arginine/serine-rich 12-like [Bos taurus]
Length = 325
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 132 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 191
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 192 AFNGVMFGDRPLKINHSNNAI 212
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 134 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 193
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 194 NGVMFGDRPLKI 205
>gi|432884719|ref|XP_004074556.1| PREDICTED: uncharacterized protein LOC101155617 [Oryzias latipes]
Length = 445
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G V R+ GD RFAFVEF +++ AL
Sbjct: 163 IRRTVYVGNLNSQTTTADQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQDSVARAL 222
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P++V S AI
Sbjct: 223 TFNGVMFGDRPLKVNHSNNAI 243
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F G+V+ +R+ GD TR AFVEF +S AL
Sbjct: 165 RTVYVGNLNSQTTTADQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQDSVARALTF 224
Query: 336 SGAVLGSLPIRV 347
+G + G P++V
Sbjct: 225 NGVMFGDRPLKV 236
>gi|327263062|ref|XP_003216340.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Anolis carolinensis]
Length = 626
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 179 IRRTVYVGNLNSQTTTADQLLEFFKPVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 238
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G + G P+++ S AI
Sbjct: 239 AFNGVVFGDRPLKINHSNNAI 259
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 181 RTVYVGNLNSQTTTADQLLEFFKPVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 240
Query: 336 SGAVLGSLPIRVSPS 350
+G V G P++++ S
Sbjct: 241 NGVVFGDRPLKINHS 255
>gi|307211749|gb|EFN87744.1| RNA-binding protein 34 [Harpegnathos saltator]
Length = 555
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 36/232 (15%)
Query: 144 TNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG 203
T GH + ++ + ++ + S +Q+EV R+T+++ +I ++ L +F G
Sbjct: 232 TIGHLGIKMFKDASEKNEQAVKKSLSPEEQEEVDRKTIFIDNIPKETKITTLKKVFGQYG 291
Query: 204 QVVDCR-----------------ICGD--PNSVLRFAFVEFTDEEGARAALSLAGTML-G 243
+ + R I D P V A++++ EE A+ ALS+ G G
Sbjct: 292 PIDNLRFRNIVPKNPKISKKVAAIKQDIHPKIVTVVAYIKYKSEESAKKALSMNGKKFEG 351
Query: 244 FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 303
Y VN + + E+ ++I+ N+ + DI F S CGE+
Sbjct: 352 NY-------------VNVKIVAKLGQEKHNIKKSIFIGNLKFGMNTNDIWENF-SKCGEI 397
Query: 304 QRLRLLGDYQH-STR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTP 353
+ +RL+ D + TR +V F ++ AL G + + P+RV + P
Sbjct: 398 ESVRLIRDKKTGQTRGFGYVNFKSEDAVTLALKLDGVEINNRPVRVRTCRAP 449
>gi|414588969|tpg|DAA39540.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 281
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+ + V + QL +F G VV R+C D NS L +A+V + ++ A AL L
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 96 ----LNFTPINGKPIRIMYSNRDPS-------SRKSGTGNIFIKNLDKSI---DNKALYD 141
Query: 298 SVC--GEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 349
+ C G + ++ D +R FV+F ESA +A++ +G ++ + V P
Sbjct: 142 TFCAFGNILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGP 197
>gi|195121744|ref|XP_002005379.1| GI19109 [Drosophila mojavensis]
gi|193910447|gb|EDW09314.1| GI19109 [Drosophila mojavensis]
Length = 300
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 239
+Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 108 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 167
Query: 240 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 296
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 168 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 216
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAA-LNCSGAVLG 341
E G + +L+ D + S R FV F +SA+AA + G LG
Sbjct: 217 EPY-GRITSHKLMLDEEGRSRRFGFVAFESPQSALAAVIGLHGKQLG 262
>gi|116790996|gb|ABK25816.1| unknown [Picea sitchensis]
Length = 248
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 151 RRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 210
RRKR ++ + ++ +Q E+ RR +YV +I + T E+LA +F CG V +
Sbjct: 46 RRKRVFSTKAQVQVQEAVQGGKQKEIERR-LYVGNIPRTSTNEELAKIFGECGNVEKAEV 104
Query: 211 CGDPNS--VLRFAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
D + RFAFV + E A+AA+ + GT +G RV+ P++ + L R
Sbjct: 105 MYDKYTKRSRRFAFVTMSTVEDAQAAIEKMNGTEIGG---RVIKVNITEKPLDVSGLNRL 161
Query: 268 EDEREMCSR--TIYCTNIDKKVTQGDIKLFFES----VCGEVQRLRLLGDYQHSTRIAFV 321
+E E +Y N+ K VT +K F + +V R+ G ++F
Sbjct: 162 TEEAEFIDSPYKVYVGNLAKAVTTETLKKKFAEKGNVLDAKVTRIPETGKSGGYGFVSFS 221
Query: 322 EFAMAESAIAALNCSGAVLGSLPIRV 347
A E+AI+A N VL P+RV
Sbjct: 222 SEADVEAAISAFN--NVVLEGKPMRV 245
>gi|358399615|gb|EHK48952.1| hypothetical protein TRIATDRAFT_164478, partial [Trichoderma
atroviride IMI 206040]
Length = 571
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 88/204 (43%), Gaps = 21/204 (10%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ +L F G Q+V RI G V +VEF
Sbjct: 178 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISGRSKGV---GYVEFKS 234
Query: 228 EEGARAALSLAGTMLGFYPVRVL-----PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTN 282
E+ + AL L G L PV V ++ A P + + P S + +Y N
Sbjct: 235 EDAVQQALQLTGQKLLGIPVIVQHTEAEKNRQARNPDSTSGHPNS-----IPFHRLYVGN 289
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVL 340
I VT+ D++ FE GE++ ++L D +R FV+F A A AL +G L
Sbjct: 290 IHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDL 348
Query: 341 GSLPIRVSPSKTPVRPRAPRPPLH 364
PIRV P + +H
Sbjct: 349 AGRPIRVGLGNDKFTPESTANLMH 372
>gi|356536386|ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 597
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 85/188 (45%), Gaps = 20/188 (10%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGAR 232
E +RTV+ I + E + F G+V D R+ D NS ++EF D
Sbjct: 219 ERDQRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 278
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPT----------FLPRSEDEREMCSRTIYCTN 282
A++L+G L PV V PS+ V T P S +R +Y N
Sbjct: 279 MAIALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYS-----GGARKLYVGN 333
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAV-L 340
+ +T+ DI+ FE+ G+V+ ++L L + H FV+FA E A A + +G + +
Sbjct: 334 LHVSITEADIRRVFEAF-GQVELVQLPLDESGHCKGFGFVQFARLEDARNAQSLNGQLEI 392
Query: 341 GSLPIRVS 348
G I+VS
Sbjct: 393 GGRTIKVS 400
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVE 322
P ++ ER+ RT++ I K + D+ FF S G+V+ +RL+ D + S + ++E
Sbjct: 214 PEADPERDQ--RTVFAYQISLKADERDVYEFF-SRAGKVRDVRLIMDRNSRRSKGVGYIE 270
Query: 323 FAMAESAIAALNCSGAVLGSLPIRVSPSK 351
F S A+ SG L P+ V PS+
Sbjct: 271 FYDVMSVPMAIALSGQPLLGQPVMVKPSE 299
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 87/209 (41%), Gaps = 30/209 (14%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLF------LTCGQVVDCRICGDPNSVLRFAFVEFT 226
+DE RTV+V + ++ ++L F + Q+V RI G V +VEF
Sbjct: 167 EDERDSRTVFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRISGRSKGV---GYVEFK 223
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRSEDEREMCSRT 277
DEE + AL L G L P+ V ++ T NP +P
Sbjct: 224 DEETVQKALQLTGKPLAGIPIIVKLTEAEKNRQARNTESTSGNPNSVP---------FHR 274
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NC 335
+Y NI VT+ D++ FE GE++ ++L D +R FV+F A A AL
Sbjct: 275 LYVGNIHFNVTEQDLQAVFEPF-GELEYVQLQKDDNGRSRGYGFVQFRDATQAREALEKM 333
Query: 336 SGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
+G L PIRV P + +H
Sbjct: 334 NGFDLAGRPIRVGLGNDKFTPESTANLMH 362
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFA 324
+EDER+ SRT++ + ++ +K FFE G V +++ D S + +VEF
Sbjct: 166 NEDERD--SRTVFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRISGRSKGVGYVEFK 223
Query: 325 MAESAIAALNCSGAVLGSLPIRV 347
E+ AL +G L +PI V
Sbjct: 224 DEETVQKALQLTGKPLAGIPIIV 246
>gi|299743563|ref|XP_001835851.2| RNA-binding protein Prp24 [Coprinopsis cinerea okayama7#130]
gi|298405712|gb|EAU85916.2| RNA-binding protein Prp24 [Coprinopsis cinerea okayama7#130]
Length = 1042
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 47/221 (21%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS--- 236
TV+V+D+ +QVTE++L +LF CG + + +I PN+V+ A VEF + + AAL+
Sbjct: 669 TVFVADLPEQVTEDELKSLFKDCGSIREVKITKLPNAVV--ALVEFFERDSVPAALTKDK 726
Query: 237 --LAGTMLGF---YPVRVLPSK---------------------------TAIAPVNP--T 262
L G + + + VR PSK + P P
Sbjct: 727 KRLQGQEISYGMLFDVR-WPSKKFKTTRRFCYVQFTSPDAAQQALELHRKELEPNLPLNV 785
Query: 263 FLPRSEDEREMC-----SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HST 316
++ E ++E R +Y + K T+ D++ F + G+V+ +R+ + H+
Sbjct: 786 YISNPERKKERTDHDANEREVYVAGLSKFTTKADLEKLF-ATYGKVKDVRMATEQDGHAR 844
Query: 317 RIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPR 357
AFVE+ + A AL+ + L I V+ + VR R
Sbjct: 845 GYAFVEYEEPQDARRALDANNYELKKRRIAVTLADPRVRAR 885
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 73/179 (40%), Gaps = 31/179 (17%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
R VYV+ + + T+ L LF T G+V D R+ + + R +AFVE+ + + AR AL
Sbjct: 804 REVYVAGLSKFTTKADLEKLFATYGKVKDVRMATEQDGHARGYAFVEYEEPQDARRALDA 863
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER-------EMCSRTIYCTNIDKKVTQG 290
L + A+ +P R E+ SR+I N+ +G
Sbjct: 864 NNYELK-------KRRIAVTLADPRVRARHNKSETGLGRNAEIRSRSIRVRNLPPNTQEG 916
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSP 349
++ FE V V+R+ + D R A VE A A G L +R P
Sbjct: 917 LLQQTFEKVAA-VRRVEVFAD----KREAAVELETAAEA-----------GKLLLRTEP 959
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 18/193 (9%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
D+ + RT+YV ++D+QVTE + LF G C++ + + FVEF + A A
Sbjct: 9 DDALPRTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAEHGGNDPYCFVEFVEHSHAAA 68
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
AL TM G R++ K VN P S + ++ ++ +V D+K
Sbjct: 69 ALQ---TMNG----RMILGKE--VKVNWATTPSSMKKDTSNHHHVFVGDLSSEVDTPDLK 119
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 348
F G++ R++ D Q S FV F AE+AI +N G L IR +
Sbjct: 120 AAFAPF-GQISDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGMN--GQWLSGRAIRTN 176
Query: 349 -PSKTPVRPRAPR 360
++ P PR P
Sbjct: 177 WATRKPPPPRQPE 189
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 16/182 (8%)
Query: 163 RMNCRT--SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVL 218
++N T S+ ++D V+V D+ +V L F GQ+ D R+ D N
Sbjct: 84 KVNWATTPSSMKKDTSNHHHVFVGDLSSEVDTPDLKAAFAPFGQISDARVVKDLQTNKSK 143
Query: 219 RFAFVEFTDEEGARAALS-LAGTMLGFYPVRV-LPSKTAIAPVNP-TFLPRSEDE----R 271
+ FV F ++ A A+ + G L +R ++ P P T S D+
Sbjct: 144 GYGFVSFLNKVDAENAIQGMNGQWLSGRAIRTNWATRKPPPPRQPETTKQLSYDDVCNSS 203
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 331
+ T+Y + +T+G ++ F S G +Q +R+ D AF+ F ESA
Sbjct: 204 SYTNTTVYIGGVTTGLTEGKMRETF-SHYGHIQEVRIFPD----KGYAFIRFMTHESAAH 258
Query: 332 AL 333
A+
Sbjct: 259 AI 260
>gi|400598297|gb|EJP66014.1| CC1-like family splicing factor [Beauveria bassiana ARSEF 2860]
Length = 556
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 84/196 (42%), Gaps = 29/196 (14%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF-----LTCGQVVDCRICGDPNSVLRFAF 222
T +DE RRTV+V + ++ +L F +T Q+V RI G V +
Sbjct: 159 TPQLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVTEAQIVKDRISGRSKGV---GY 215
Query: 223 VEFTDEEGARAALSLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRSEDEREM 273
VEF DE+ AL L G L PV V ++ T +P +P
Sbjct: 216 VEFKDEDSVATALQLTGQKLLGIPVIVQVTEAEKNRQARNTEAGGPHPNHVP-------- 267
Query: 274 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAA 332
+Y NI VT+ D++ FE GE++ ++L D +R FV+F A A A
Sbjct: 268 -FHRLYVGNIHFNVTEEDLRAVFEPF-GELEFVQLQKDESDRSRGYGFVQFRDATQAREA 325
Query: 333 L-NCSGAVLGSLPIRV 347
L +G L PIRV
Sbjct: 326 LEKMNGFDLAGRPIRV 341
>gi|195383760|ref|XP_002050594.1| GJ22239 [Drosophila virilis]
gi|194145391|gb|EDW61787.1| GJ22239 [Drosophila virilis]
Length = 301
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 18/167 (10%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 239
+Y+ ++++ + + + F G +++C + D R + FV F EE ARAA+
Sbjct: 109 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 168
Query: 240 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 296
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 169 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 217
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAA-LNCSGAVLG 341
E G + +L+ D + S R FV F +SA+AA + G LG
Sbjct: 218 EPY-GRITSHKLMLDEEGRSRRFGFVAFENPQSAVAAVIGLHGKQLG 263
>gi|148686564|gb|EDL18511.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Mus
musculus]
Length = 223
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 92 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 151
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 152 AFNGVMFGDRPLKINHSNNAI 172
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA S AL
Sbjct: 94 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAF 153
Query: 336 SGAVLGSLPIRV 347
+G + G P+++
Sbjct: 154 NGVMFGDRPLKI 165
>gi|358386930|gb|EHK24525.1| hypothetical protein TRIVIDRAFT_71881 [Trichoderma virens Gv29-8]
Length = 571
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 87/204 (42%), Gaps = 21/204 (10%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ +L F G Q+V RI G V +VEF +
Sbjct: 179 EDERDRRTVFVQQLAARLRTRELKEFFEKVGAVNEAQIVKDRISGRSKGV---GYVEFKN 235
Query: 228 EEGARAALSLAGTMLGFYPVRVL-----PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTN 282
E+ + AL L G L PV V ++ A P P S + +Y N
Sbjct: 236 EDSVQLALQLTGQKLLGIPVIVQHTEAEKNRQARNPDASNGHPNS-----IPFHRLYVGN 290
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVL 340
I VT+ D++ FE GE++ ++L D +R FV+F A A AL +G L
Sbjct: 291 IHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDL 349
Query: 341 GSLPIRVSPSKTPVRPRAPRPPLH 364
PIRV P + +H
Sbjct: 350 AGRPIRVGLGNDKFTPESTANLMH 373
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 223
N SN + + +YV +I VTE+ L +F G++ ++ D N R + FV
Sbjct: 270 NPDASNGHPNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGRSRGYGFV 329
Query: 224 EFTDEEGARAAL-SLAGTMLGFYPVRV 249
+F D AR AL + G L P+RV
Sbjct: 330 QFRDAGQAREALEKMNGFDLAGRPIRV 356
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 16/180 (8%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGA 231
++ + ++YV D++Q VTE QL LF GQVV R+C D S L + +V + + A
Sbjct: 24 NQFVPTSLYVGDLEQNVTETQLYDLFNQHGQVVSIRVCRDLTSRRSLGYGYVNYNNVHDA 83
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ + L F PV P + + +PT R+ + IY N+DK +
Sbjct: 84 AQAIEV----LNFTPVNGKPIRIMYSYRDPTI-------RKSGTGNIYIKNLDKAIDNKA 132
Query: 292 IKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 349
+ F S G + ++ D S FV+F ESA A++ +G +L + V P
Sbjct: 133 LHDTF-SAFGSILSCKVATDSLGQSLGYGFVQFDNEESAKNAIDKLNGMLLNDKQVYVGP 191
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+YV ++D +T+++L LF G + C++ DPN V R + FV F T EE +RA +
Sbjct: 313 LYVKNLDDSITDDKLKELFSEFGTITSCKVMRDPNGVSRGSGFVAFSTAEEASRALTEMN 372
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 373 GKMVVSKPLYV 383
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 31/194 (15%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGA 231
D+ VYV ++ + TEE L +F G + + D N R F FV F + ++ A
Sbjct: 203 DKATFNNVYVKNLSETTTEEDLKKIFGEYGTITSAVVMRDGNGKSRCFGFVNFENPDDAA 262
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--------------- 276
++ +L G V ++ +SE E E+ R
Sbjct: 263 QSVEALNGKTFDEKEWYVGKAQK-----------KSEREVELKGRFEQTLKETVDKFQGL 311
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-N 334
+Y N+D +T +K F S G + +++ D +R FV F+ AE A AL
Sbjct: 312 NLYVKNLDDSITDDKLKELF-SEFGTITSCKVMRDPNGVSRGSGFVAFSTAEEASRALTE 370
Query: 335 CSGAVLGSLPIRVS 348
+G ++ S P+ V+
Sbjct: 371 MNGKMVVSKPLYVA 384
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 19/166 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+DQ VT+ QL LF GQVV R+C D ++ L + +V +++++ A A+ +
Sbjct: 41 SLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATRAIDV 100
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L F P+ + +++ +PT +R+ + I+ N+DK + DIK E
Sbjct: 101 ----LNFTPLNNKTIRVSVSRRDPT-------DRKSGAGNIFIKNLDKSI---DIKALHE 146
Query: 298 --SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVL 340
S G + ++ D S FV++ E+A A++ +L
Sbjct: 147 TFSSFGTIISCKIATDASGQSKGYGFVQYDSEEAAQTAIDKLNGML 192
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF 225
+T Q D+ +YV ++D + +E+L LF G + C++ DP+ + R + FV F
Sbjct: 310 QTVKEQVDKYQGVNLYVKNLDDTIDDEKLKELFSEYGTITSCKVMRDPSGISRGSGFVAF 369
Query: 226 -TDEEGARAALSLAGTMLGFYPVRV 249
T EE +RA + G M+ P+ V
Sbjct: 370 STPEEASRALGEMNGKMIVSKPLYV 394
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
+E RT+YV ++D V+E+ L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 EESNPRTLYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQ--SA 59
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
A +LA + + + A +P N L S I+ ++ ++ +K
Sbjct: 60 ATALAAMNKRSFLDKEMKVNWATSPGNQPKLDTSNHHH------IFVGDLSPEIETQTLK 113
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSPS 350
F GE+ R++ D Q S AFV F A AA+N +G LGS IR + S
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWS 172
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 16/174 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDE-EGARAALS 236
++YV D++ V++ QL LF GQVV R+C D S L +A+V F++ + ARA
Sbjct: 47 SLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDAARALEV 106
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L +L P+RV+ S R R S I+ N+DK + + F
Sbjct: 107 LNFAVLNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDKTIDNKTLHETF 154
Query: 297 ESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
S + + + S FV++ E+A A+ + +G ++ P+ V P
Sbjct: 155 SSFGTILSCKVAMDEAGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGP 208
>gi|195029531|ref|XP_001987626.1| GH22019 [Drosophila grimshawi]
gi|193903626|gb|EDW02493.1| GH22019 [Drosophila grimshawi]
Length = 304
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 18/167 (10%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 239
+Y+ ++++ + + + F G +++C + D R + FV F EE ARAA+
Sbjct: 112 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 171
Query: 240 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 296
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 172 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 220
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAA-LNCSGAVLG 341
E G + +L+ D + S R FV F +SA+AA + G LG
Sbjct: 221 EPY-GRITSHKLMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLG 266
>gi|125811664|ref|XP_001361971.1| GA18301 [Drosophila pseudoobscura pseudoobscura]
gi|195171077|ref|XP_002026337.1| GL20391 [Drosophila persimilis]
gi|54637147|gb|EAL26550.1| GA18301 [Drosophila pseudoobscura pseudoobscura]
gi|194111239|gb|EDW33282.1| GL20391 [Drosophila persimilis]
Length = 296
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 239
+Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 104 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 163
Query: 240 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 296
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 164 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 212
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAA-LNCSGAVLG 341
E G + +L+ D + S R FV F +SA+AA + G LG
Sbjct: 213 EPY-GRITSHKLMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLG 258
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+ + V + QL +F G VV R+C D NS L +A+V + ++ A AL L
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 96 ----LNFTPINGKPIRIMYSNRDPS-------SRKSGTGNIFIKNLDKSI---DNKALYD 141
Query: 298 SVC--GEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 349
+ C G + ++ D +R FV+F ESA +A++ +G ++ + V P
Sbjct: 142 TFCAFGNILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGP 197
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTDEEGARAALS-LA 238
+Y+ ++++ + +E+L LF G + C++ D N V R + FV F E A AL+ +
Sbjct: 319 LYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMN 378
Query: 239 GTMLGFYPVRV 249
G M+G P+ V
Sbjct: 379 GKMVGSKPLYV 389
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 9/176 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSLA 238
VYV ++ VT+++L +F G + + D + R F FV F + + A+A L
Sbjct: 216 VYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQELN 275
Query: 239 GTMLG---FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT-IYCTNIDKKVTQGDIKL 294
G + Y R + F ++ E T +Y N+++ + ++
Sbjct: 276 GKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDEKLRE 335
Query: 295 FFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 348
F + G + +++ D +R FV F AE A AL +G ++GS P+ V+
Sbjct: 336 LF-AEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVA 390
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 77/179 (43%), Gaps = 20/179 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T +++ ++D+Q+ + L F+ G V+ C++ D + +
Sbjct: 116 CRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFVAFGNVLSCKVATDEQGRSKGY 175
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE-----DEREMCS 275
FV + E A A+ ML + K + P +PR E DE +
Sbjct: 176 GFVHYETAEAAETAIKAVNGML------LNDKKVYVGP----HIPRKERQSKLDEMKAQF 225
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN 334
+Y N+D +VTQ + + F + + D S FV + E A AA++
Sbjct: 226 TNLYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVDDEGRSKGFGFVNYESHEEAQAAVD 284
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 18/175 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE + +F G V R+C D + L +A+V + + +G RA
Sbjct: 46 SLYVGELDPTVTEAMIFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTADGERALEQ 105
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L +++ P R++ S+ R R+ I+ N+D+++ + F
Sbjct: 106 LNYSLIKGRPCRIMWSQ------------RDPALRKTGQGNIFIKNLDEQIDNKALHDTF 153
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNC-SGAVLGSLPIRVSP 349
+ G V ++ D Q ++ FV + AE+A A+ +G +L + V P
Sbjct: 154 VAF-GNVLSCKVATDEQGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGP 207
>gi|427789733|gb|JAA60318.1| Putative rox8 [Rhipicephalus pulchellus]
Length = 406
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 17/174 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
RT+YV ++D VTEE L +F GQV C+I +P + + FVEF+D + A +AL
Sbjct: 13 RTLYVGNLDTAVTEELLVAVFGQMGQVKGCKIIHEPGND-PYCFVEFSDHQSAASALLAM 71
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
L F + + A +P N L S+ I+ ++ ++ ++ F
Sbjct: 72 NKRLCF--GKEMKVNWATSPGNTPKLDTSKHHH------IFVGDLSPEIETTQLRDAFAP 123
Query: 299 VCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
G++ R++ D Q ++FV+ A AE+AI +N G LGS IR
Sbjct: 124 F-GDISDCRVVRDPQTLKSKGYGFVSFVKKADAENAIGTMN--GQWLGSRAIRT 174
>gi|255550678|ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
gi|223544486|gb|EEF46005.1| splicing factor, putative [Ricinus communis]
Length = 609
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 83/181 (45%), Gaps = 16/181 (8%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL 235
+RTV+ I + E + F G+V D R+ D NS ++EF D A+
Sbjct: 225 QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 284
Query: 236 SLAGTMLGFYPVRVLPSKT------AIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 289
+L+G L PV V PS+ + VN P S +R +Y N+ +T+
Sbjct: 285 ALSGQPLLGQPVMVKPSEAEKNLVQSTTTVNAGSGPYS-----GGARRLYVGNLHFNITE 339
Query: 290 GDIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAV-LGSLPIRV 347
++ FE G V+ ++L L + H FV+FA E A ALN +G V + PI+V
Sbjct: 340 DQLRQVFEPF-GIVELVQLPLDETGHCKGFGFVQFARLEDAKNALNLNGQVEIAGRPIKV 398
Query: 348 S 348
S
Sbjct: 399 S 399
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAMAESAIAAL 333
RT++ I K + D+ FF S G+V+ +RL+ D + S + ++EF S A+
Sbjct: 226 RTVFAYQICLKADERDVYEFF-SRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 284
Query: 334 NCSGAVLGSLPIRVSPSK 351
SG L P+ V PS+
Sbjct: 285 ALSGQPLLGQPVMVKPSE 302
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 85/176 (48%), Gaps = 20/176 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+ + V + QL +F G VV R+C D NS L +A+V + ++ A AL L
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 96 ----LNFTPINGKPIRIMYSNRDPS-------SRKSGTGNIFIKNLDKSI---DNKALYD 141
Query: 298 SVC--GEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 349
+ C G + ++ D +R FV+F ESA +A++ +G ++ + V P
Sbjct: 142 TFCAFGNILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGP 197
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTDEEGARAALS-LA 238
+Y+ ++++ + +E+L LF G + C++ D N V R + FV F E A AL+ +
Sbjct: 319 LYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMN 378
Query: 239 GTMLGFYPVRV 249
G M+G P+ V
Sbjct: 379 GKMVGSKPLYV 389
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 9/176 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSLA 238
VYV ++ VT+++L +F G + + D + R F FV F + + A+A L
Sbjct: 216 VYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQELN 275
Query: 239 GTMLG---FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT-IYCTNIDKKVTQGDIKL 294
G + Y R + F ++ E T +Y N+++ + ++
Sbjct: 276 GKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDEKLRE 335
Query: 295 FFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 348
F + G + +++ D +R FV F AE A AL +G ++GS P+ V+
Sbjct: 336 LF-AEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVA 390
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 33/239 (13%)
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATL 198
+GT NG R +S G++R D+ T++V D+ V++ L +
Sbjct: 134 NGTIMPNGGQNFRLNWATFSSGEKR---------HDDSPDYTIFVGDLAADVSDHHLTEV 184
Query: 199 FLT-CGQVVDCRICGDPNSVLR--FAFVEFTDE-EGARAALSLAGTMLGFYPVRVLP--- 251
F T V ++ D N+ + FV F DE E RA + G + P+R+ P
Sbjct: 185 FRTRYNSVKGAKVVIDRNTGRSKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASN 244
Query: 252 ----SKTAIAPV-NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRL 306
++T+ A NP +++E + + TI+ N+D VT +K F + GE+ +
Sbjct: 245 KNLGTQTSKASYQNPQ--GGAQNENDPNNTTIFVGNLDPNVTDEHLKQVF-TQYGELVHV 301
Query: 307 RLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 362
++ R FV+FA AE A+ LN G +LG +R+S ++P + + P
Sbjct: 302 KI----PSGKRCGFVQFADRSSAEEALRVLN--GTLLGGQNVRLSWGRSPANKQTQQDP 354
>gi|194886456|ref|XP_001976617.1| GG19920 [Drosophila erecta]
gi|190659804|gb|EDV57017.1| GG19920 [Drosophila erecta]
Length = 307
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 239
+Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 240 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 296
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 175 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 223
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAA-LNCSGAVLG 341
E G + +L+ D + S R FV + +SA+AA + G LG
Sbjct: 224 EPY-GRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLG 269
>gi|346327401|gb|EGX96997.1| RNA splicing factor (Pad-1), putative [Cordyceps militaris CM01]
Length = 545
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 82/182 (45%), Gaps = 11/182 (6%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLF-----LTCGQVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ +L F +T Q+V RI G V +VEF +
Sbjct: 153 EDERDRRTVFVQQLAARLRSRELKAFFEKVGPVTEAQIVKDRISGRSKGV---GYVEFKN 209
Query: 228 EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
E+ AL L G L PV V ++ T P + +Y NI V
Sbjct: 210 EDSVAPALQLTGQKLLGIPVIVQVTEAEKNRQARTTEPGGSHPNHVPFHRLYVGNIHFNV 269
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPI 345
T+ D++ F+ GE++ ++L D + +R FV+F A A AL +G L PI
Sbjct: 270 TEQDLQAVFDPF-GELEFVQLQKDETNRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPI 328
Query: 346 RV 347
RV
Sbjct: 329 RV 330
>gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]
Length = 575
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 5/179 (2%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF +E+
Sbjct: 176 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDS 235
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
+AAL L G L PV V ++ T + +Y NI +T+
Sbjct: 236 VQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPFHRLYVGNIHFSITEQ 295
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
D++ FE GE++ ++L D +R FV+F A A AL +G L PIRV
Sbjct: 296 DLQNVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIRV 353
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 23/196 (11%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGHVKSCKIIREPGND-PYAFIEYSTYQAATT 60
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 292
AL+ L F + VN P ++ + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNKRL-FLDKEIK--------VNWATSPGNQPKTDISSHHHIFVGDLSPEIETETL 111
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIR 346
+ F GE+ R++ D H+ + ++FV+ A AE+AI A+N G +GS IR
Sbjct: 112 REAFAPF-GEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAITAMN--GQWIGSRSIR 167
Query: 347 VSPSKTPVRPRAPRPP 362
+ S + P PR P
Sbjct: 168 TNWSTRKLPP--PREP 181
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 5/179 (2%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF +E+
Sbjct: 177 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDS 236
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
+AAL L G L PV V ++ T + +Y NI +T+
Sbjct: 237 VQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPFHRLYVGNIHFSITEQ 296
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
D++ FE GE++ ++L D +R FV+F A A AL +G L PIRV
Sbjct: 297 DLQNVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIRV 354
>gi|225449617|ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|296086279|emb|CBI31720.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 10/196 (5%)
Query: 156 GYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGD 213
G +G + + S++Q++ VYV I TE+ + + F +CG + VDC + +
Sbjct: 159 GGEKGVVKETAQISDSQENGDASNKVYVGGIPYYSTEDDIRSYFDSCGTITEVDCMMFPE 218
Query: 214 PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 273
A + F E A+ AL+L G +G +++ P KT A + F P EM
Sbjct: 219 SGKFRGIAIISFKTEAAAKRALALDGADMGGLFLKIQPYKTTRANKSSDFAP------EM 272
Query: 274 CS--RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 331
IY N+ +T+ +++ FF R + + Q A V+F+ S
Sbjct: 273 VEGYNRIYVGNLPWDITEDEVRKFFSRCNVSSIRFGMDKETQEFRGYAHVDFSDNPSLTM 332
Query: 332 ALNCSGAVLGSLPIRV 347
AL ++ P ++
Sbjct: 333 ALKLDQEIVCGRPAKI 348
>gi|115460618|ref|NP_001053909.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|75327488|sp|Q7XTT4.2|NUCL2_ORYSJ RecName: Full=Nucleolin 2; AltName: Full=Protein NUCLEOLIN LIKE 2
gi|38344339|emb|CAD41755.2| OSJNBa0058K23.21 [Oryza sativa Japonica Group]
gi|113565480|dbj|BAF15823.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|215737156|dbj|BAG96085.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 707
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 22/192 (11%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+T++V ++ V +EQ+ F G+VVD R + R F VEF E A+ AL L
Sbjct: 449 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL 508
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRS-------EDEREMCSRTIYCTNIDKKVTQG 290
AG L PVR+ +A + P S + + TI+ D +
Sbjct: 509 AGHDLMGRPVRL-----DLARERGAYTPGSGRDNSSFKKPAQSSGNTIFIKGFDTSLDIH 563
Query: 291 DIKLFFES---VCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAVLGSLPI 345
I+ E CGE+ R+ + DY+ S +A+++FA S A +G+ LG +
Sbjct: 564 QIRNSLEEHFGSCGEITRVSIPKDYETGASKGMAYMDFADNGSLSKAYELNGSDLGGYSL 623
Query: 346 RVSPSKTPVRPR 357
V + RPR
Sbjct: 624 YVDEA----RPR 631
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL----GDYQHSTRIAF 320
P S + S+T++ N+ V Q +K FF+ GEV +R G+++
Sbjct: 438 PASNQNQATGSKTLFVGNLPYNVEQEQVKQFFQE-AGEVVDIRFSTFEDGNFRG---FGH 493
Query: 321 VEFAMAESAIAALNCSGAVLGSLPIRV 347
VEFA AE+A AL +G L P+R+
Sbjct: 494 VEFATAEAAKKALELAGHDLMGRPVRL 520
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 5/179 (2%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF +E+
Sbjct: 177 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDS 236
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
+AAL L G L PV V ++ T + +Y NI +T+
Sbjct: 237 VQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPFHRLYVGNIHFSITEQ 296
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
D++ FE GE++ ++L D +R FV+F A A AL +G L PIRV
Sbjct: 297 DLQNVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIRV 354
>gi|396488840|ref|XP_003842956.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
gi|312219534|emb|CBX99477.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
Length = 590
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 91/207 (43%), Gaps = 16/207 (7%)
Query: 152 RKRNGYSQGKRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR 209
R+RNG RR++ +T + +D+ +RT++V I Q+ L + F T G VV+ +
Sbjct: 153 RRRNGADD--RRLSRKTPEPEVTEDDRDKRTIFVQQISQRAETRHLRSFFETVGPVVEAQ 210
Query: 210 ICGD--PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPR 266
I D +VEF +EE AL L G L P+ L P+
Sbjct: 211 IVKDRVTGRSKGVGYVEFKEEESVPKALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGA 270
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR------IAF 320
+ +Y NI VT+ D++ FE GE++++ L D + R + F
Sbjct: 271 APGANGAPFHRLYVGNIHFSVTEKDLQEIFEP-YGELEQVILQRDELNPGRSKGYGFVQF 329
Query: 321 VEFAMAESAIAALNCSGAVLGSLPIRV 347
V+ A+ A+A +N G L IRV
Sbjct: 330 VDPTHAKDALAEMN--GFELAGRQIRV 354
>gi|385305672|gb|EIF49630.1| polyadenylate-binding protein [Dekkera bruxellensis AWRI1499]
Length = 655
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 20/188 (10%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF 225
T +++ +E ++YV D+D VTE L +F GQV R+C B L +A+V +
Sbjct: 49 TKDSKDNEQTFASLYVGDLDPSVTESDLYEIFSKVGQVSSIRVCRBAVTKKSLCYAYVNY 108
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
E A AL L F ++ + + +P+ R+ + ++ N+
Sbjct: 109 QKREEAEHALD----TLAFCDIKGKQCRIMWSQRDPSM-------RKKGTGNVFIKNLHP 157
Query: 286 KVTQGDIKLFFE--SVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAAL-NCSGAVLG 341
+ D K ++ S G++ ++ D + HS FV + AESA AA+ N +G +L
Sbjct: 158 DI---DNKTLYDTFSTFGKILSCKIATDEHGHSKGFGFVHYDDAESAKAAIENVNGMLLN 214
Query: 342 SLPIRVSP 349
++ + V+P
Sbjct: 215 NMEVYVAP 222
>gi|332029721|gb|EGI69600.1| Nucleolysin TIAR [Acromyrmex echinatior]
Length = 393
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 13/180 (7%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
+E RT+YV ++D V+E+ L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 EESNPRTLYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQC--A 59
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
A +LA + + + A +P N L S I+ ++ ++ +K
Sbjct: 60 ATALAAMNKRSFLDKEMKVNWATSPGNQPKLDTSNHHH------IFVGDLSPEIETQTLK 113
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSPS 350
F GE+ R++ D Q S AFV F A AA+N +G LGS IR + S
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWS 172
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 23/196 (11%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 292
AL+ L F + VN P ++ + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNKRL-FLEKEIK--------VNWATSPGNQPKTDISSHHHIFVGDLSPEIETETL 111
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIR 346
+ F GE+ R++ D H+ + ++FV+ A AE+AI A+N G +GS IR
Sbjct: 112 REAFAPF-GEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIR 167
Query: 347 VSPSKTPVRPRAPRPP 362
+ S + P PR P
Sbjct: 168 TNWSTRKLPP--PREP 181
>gi|322795213|gb|EFZ18035.1| hypothetical protein SINV_11488 [Solenopsis invicta]
Length = 455
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 82/175 (46%), Gaps = 13/175 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
RT+YV ++D V+E+ L LF G V C+I +P + +AFVEFT+ + AA +LA
Sbjct: 80 RTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQC--AATALA 136
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
+ + + A +P N L S I+ ++ ++ +K F
Sbjct: 137 AMNKRSFLEKEMKVNWATSPGNQPKLDTSNHHH------IFVGDLSPEIETQTLKEAFAP 190
Query: 299 VCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVSPS 350
GE+ R++ D Q S AFV F A AA+N +G LGS IR + S
Sbjct: 191 F-GEISNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWS 244
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 80/179 (44%), Gaps = 5/179 (2%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF +E+
Sbjct: 177 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDS 236
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
+AAL L G L PV V ++ T + +Y NI +T+
Sbjct: 237 VQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPFHRLYVGNIHFSITEQ 296
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
D++ FE GE++ ++L D +R FV+F A A AL +G L PIRV
Sbjct: 297 DLQNVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIRV 354
>gi|449438385|ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEF 225
+N ++ + ++YV D+D VT+ QL LF GQVV R+C D S L + +V +
Sbjct: 18 AANGGANQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNY 77
Query: 226 TDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 284
++ A AL L T L P+RV+ S R R+ S I+ N+D
Sbjct: 78 SNPVDASRALDVLNFTPLNGNPIRVMYSH------------RDPSVRKSGSGNIFIKNLD 125
Query: 285 KKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGS 342
K + + F S G + ++ D S FV+F E+A+ A+ +G +L
Sbjct: 126 KAIDHKALHDTF-SAFGSILSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLNGMLLND 184
Query: 343 LPIRVSP 349
+ V P
Sbjct: 185 KQVFVGP 191
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTD-EEGARAALSLA 238
+YV ++D + +++L LF G + C++ DPN + R + FV F+ EE ARA +
Sbjct: 313 LYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAARALAEMN 372
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 373 GRMIVSKPLYV 383
>gi|449296279|gb|EMC92299.1| hypothetical protein BAUCODRAFT_38330 [Baudoinia compniacensis UAMH
10762]
Length = 634
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGA 231
DE RRTV+V + ++ ++L F G VV+ +I D S +VEF DEE
Sbjct: 242 DERDRRTVFVQQLAARLRTKELQAFFEAVGPVVEAQIVKDRVSGRSKGVGYVEFKDEESV 301
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--------RTIYCTNI 283
+ A+ L G L P+ IA + R E + +Y NI
Sbjct: 302 QKAIQLTGQKLLGIPI--------IAQLTEAEKNRQARHTEGTATQSNGIPFHRLYVGNI 353
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALNCSGAV 339
+T+ D+K FE GE++ ++L + Q ++ + F++ A A+ A+ +N G
Sbjct: 354 HFSITEDDLKNVFEPF-GELEFVQLQKEEQGRSKGYGFVQFIDPAQAKEALEKMN--GFE 410
Query: 340 LGSLPIRV 347
L PIRV
Sbjct: 411 LAGRPIRV 418
>gi|7528270|gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus]
Length = 649
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 18/187 (9%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEF 225
+N ++ + ++YV D+D VT+ QL LF GQVV R+C D S L + +V +
Sbjct: 18 AANGGANQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNY 77
Query: 226 TDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 284
++ A AL L T L P+RV+ S R R+ S I+ N+D
Sbjct: 78 SNPVDASRALDVLNFTPLNGNPIRVMYSH------------RDPSVRKSGSGNIFIKNLD 125
Query: 285 KKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGS 342
K + + F S G + ++ D S FV+F E+A+ A+ +G +L
Sbjct: 126 KAIDHKALHDTF-SAFGSILSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLNGMLLND 184
Query: 343 LPIRVSP 349
+ V P
Sbjct: 185 KQVFVGP 191
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTD-EEGARAALSLA 238
+YV ++D + +++L LF G + C++ DPN + R + FV F+ EE ARA +
Sbjct: 313 LYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAARALAEMN 372
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 373 GRMIVSKPLYV 383
>gi|398407631|ref|XP_003855281.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
gi|339475165|gb|EGP90257.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
Length = 598
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 5/179 (2%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEG 230
Q+E +RTV+V + + +QL F G VV+ +I D S +VEF DEE
Sbjct: 206 QEERDKRTVFVQQLAAALRTKQLKAFFEQSGPVVEAQIVKDRVSGRSKGVGYVEFADEES 265
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
+ AL L G L P+ V ++ T + + +Y NI + +
Sbjct: 266 VQKALELTGQKLMNIPIIVQLTEAEKNRQARTSEGQPTQSNGIPFHRLYVGNIHFSIEES 325
Query: 291 DIKLFFESVCGEVQRLRLLG-DYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
D++ FE GE++ ++L D S FV+FA ++ A AL +G + PIRV
Sbjct: 326 DLRDVFEPF-GELEFVQLQKEDTGRSKGYGFVQFAKSDEAKIALEKMNGFEVAGRPIRV 383
>gi|326517609|dbj|BAK03723.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 990
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDE 228
+ A++ E +++ V +S++ +T E + LF CG+VVDC I A+VE++
Sbjct: 355 TEAEKAEALKKIVQISNLSPVLTVENIKQLFGYCGKVVDCTIT----ESKHIAYVEYSKP 410
Query: 229 EGARAALSLAGTMLGFYPVRV-----LPSKTAIAPVN 260
E A AAL+L+ +G P+ V LP KT+IA N
Sbjct: 411 EEATAALALSNVDVGGRPLNVEMAKSLPQKTSIANSN 447
>gi|195489681|ref|XP_002092839.1| GE11444 [Drosophila yakuba]
gi|194178940|gb|EDW92551.1| GE11444 [Drosophila yakuba]
Length = 307
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 239
+Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 240 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 296
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 175 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 223
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAA-LNCSGAVLG 341
E G + +L+ D + S R FV + +SA+AA + G LG
Sbjct: 224 EPY-GRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLG 269
>gi|168053933|ref|XP_001779388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669186|gb|EDQ55778.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 16/177 (9%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAA 234
+ ++YV D++ V+E QL LF GQVV R+C D L +A+V + + A A
Sbjct: 26 VSTSLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNYNSAQDATRA 85
Query: 235 LSLAG-TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L L ++L P+R++ F R R+ + I+ N+DK + +
Sbjct: 86 LELLNFSVLNGNPIRIM------------FSHRDPSIRKSGTANIFIKNLDKTIDNKALH 133
Query: 294 LFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
F + G + + S FV+F ESA+ A+ +G +L + V P
Sbjct: 134 DTFSAFGGILSCKVAVDGSGQSKGYGFVQFEQEESALTAIEKVNGMLLNDKQVFVGP 190
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 19/104 (18%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTD-EEGARAALSLA 238
+Y+ ++D V +E+L LF G + C++ DP R + FV F+ EE RA +
Sbjct: 312 LYLKNLDDTVDDEKLRELFADYGTITSCKVMRDPQGQSRGSGFVAFSSPEEATRAVTEMN 371
Query: 239 GTMLGFYPVRVLPS-----------------KTAIAPVNPTFLP 265
G M+G P+ V + +T+++P PT LP
Sbjct: 372 GKMVGSKPLYVALAQRKEERRARLQAAFAQMRTSVSPAVPTSLP 415
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 9/176 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSLA 238
VYV ++ + TE+ L +F G + + D + + F FV F + A+A +L
Sbjct: 209 VYVKNLGENTTEDDLKNVFGAYGTISSAVVMRDSDGKSKCFGFVNFEHPDNAAKAVEALN 268
Query: 239 GTMLG---FYPVRVLPSKTAIAPVNPTF-LPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
G +Y R A + F R E + +Y N+D V ++
Sbjct: 269 GKKRDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNLDDTVDDEKLRE 328
Query: 295 FFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 348
F G + +++ D Q +R FV F+ E A A+ +G ++GS P+ V+
Sbjct: 329 LFAD-YGTITSCKVMRDPQGQSRGSGFVAFSSPEEATRAVTEMNGKMVGSKPLYVA 383
>gi|326524289|dbj|BAK00528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 429
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 32/222 (14%)
Query: 163 RMNCRTSNAQQDEVIRR-TVYVSDIDQQVTEEQLATLFLTCG-QVVDCRICGDPNSVLR- 219
R+N ++ Q+++ ++V D+ +VT+ L F D R+ D +
Sbjct: 129 RVNWAYASGQREDTTDHFHIFVGDLSPEVTDSALFAFFSAYSPNCSDARVMWDQKTGRSR 188
Query: 220 -FAFVEFTDEEGARAALS-LAGTMLGFYPVR--------------VLPSKTAIAPVNPTF 263
+ FV F +++ A++A++ L G LG +R + +I VN F
Sbjct: 189 GYGFVSFRNQQDAQSAINDLNGQWLGNRQIRCNWATKGANSGEDQLASDSKSIVDVNNNF 248
Query: 264 LPRSED-------EREMCSRTIYCTNIDKKVTQGDIKLFFESV-CGEVQRLRLLGDYQHS 315
++ E RT+Y N+ +VTQ + FF ++ G ++ +R+ QH
Sbjct: 249 TENAKQKSNEDAPENNPLYRTVYVGNLAHEVTQDVLHRFFHALGAGAIEEVRV----QHG 304
Query: 316 TRIAFVEFA-MAESAIAALNCSGAVLGSLPIRVSPSKTPVRP 356
FV+++ AE+A+A +G +LG P++ S P P
Sbjct: 305 KGFGFVKYSNHAETALAIQTGNGRILGGKPVKCSWGNKPTPP 346
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 17/172 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSL 237
R+VYV +I QVTE L +F + G V C++ S + FV++ + A A L+L
Sbjct: 61 RSVYVGNIHVQVTEALLREVFQSAGSVDGCKLIRKEKS--SYGFVDYYERGSAALAILTL 118
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G + P+RV + + + ED + I+ ++ +VT + FF
Sbjct: 119 NGKQIFGQPIRVNWAYAS---------GQREDTTDHFH--IFVGDLSPEVTDSALFAFFS 167
Query: 298 SVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIR 346
+ R++ D + S FV F + A +A+N +G LG+ IR
Sbjct: 168 AYSPNCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGNRQIR 219
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
AL+ L + + + A +P N P+++ I+ ++ ++ ++
Sbjct: 61 ALTAMNKRL--FLEKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLR 112
Query: 294 LFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
F GE+ R++ D H+ + ++FV+ A AE+AI A+N G +GS IR
Sbjct: 113 EAFAPF-GEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRT 168
Query: 348 SPSKTPVRPRAPRPP 362
+ S + P PR P
Sbjct: 169 NWSTRKLPP--PREP 181
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
AL+ L + + + A +P N P+++ I+ ++ ++ ++
Sbjct: 61 ALTAMNKRL--FLEKEIKVNWATSPGN---QPKTDISSH---HHIFVGDLSPEIETETLR 112
Query: 294 LFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
F GE+ R++ D H+ + ++FV+ A AE+AI A+N G +GS IR
Sbjct: 113 EAFAPF-GEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRT 168
Query: 348 SPSKTPVRPRAPRPP 362
+ S + P PR P
Sbjct: 169 NWSTRKLPP--PREP 181
>gi|303280195|ref|XP_003059390.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459226|gb|EEH56522.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 589
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%)
Query: 162 RRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA 221
R + A+ + RTVY +++ +TE+ LA F G V + G + RF
Sbjct: 279 REEREKQGGAEDTSDVARTVYAGNVNSSITEDMLADFFSVAGVVTYVKFAGSDFNPSRFG 338
Query: 222 FVEFTDEEGARAALSLAGTMLGFYPVRV 249
FVEFTD+ A AA +L+GTML ++V
Sbjct: 339 FVEFTDKASAEAAKALSGTMLAEMTLKV 366
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 274 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 333
+RT+Y N++ +T+ + FF SV G V ++ G + +R FVEF SA AA
Sbjct: 294 VARTVYAGNVNSSITEDMLADFF-SVAGVVTYVKFAGSDFNPSRFGFVEFTDKASAEAAK 352
Query: 334 NCSGAVLGSLPIRVSPSKTPV 354
SG +L + ++V S P+
Sbjct: 353 ALSGTMLAEMTLKVKHSNNPI 373
>gi|125591671|gb|EAZ32021.1| hypothetical protein OsJ_16200 [Oryza sativa Japonica Group]
Length = 728
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 22/192 (11%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+T++V ++ V +EQ+ F G+VVD R + R F VEF E A+ AL L
Sbjct: 470 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL 529
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRS-------EDEREMCSRTIYCTNIDKKVTQG 290
AG L PVR+ +A + P S + + TI+ D +
Sbjct: 530 AGHDLMGRPVRL-----DLARERGAYTPGSGRDNSSFKKPAQSSGNTIFIKGFDTSLDIH 584
Query: 291 DIKLFFES---VCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAVLGSLPI 345
I+ E CGE+ R+ + DY+ S +A+++FA S A +G+ LG +
Sbjct: 585 QIRNSLEEHFGSCGEITRVSIPKDYETGASKGMAYMDFADNGSLSKAYELNGSDLGGYSL 644
Query: 346 RVSPSKTPVRPR 357
V + RPR
Sbjct: 645 YVDEA----RPR 652
>gi|115477976|ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|46389987|dbj|BAD16229.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|113630816|dbj|BAF24497.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|125562753|gb|EAZ08133.1| hypothetical protein OsI_30396 [Oryza sativa Indica Group]
gi|125604734|gb|EAZ43770.1| hypothetical protein OsJ_28392 [Oryza sativa Japonica Group]
gi|169244485|gb|ACA50516.1| poly(A)-binding protein [Oryza sativa Japonica Group]
gi|215695451|dbj|BAG90618.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 662
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D V + QL +F G VV R+C D N+ L +A+V ++ A AL
Sbjct: 41 SLYVGDLDVSVQDAQLFDVFAQVGGVVSVRVCRDVNTRRSLGYAYVNYSSPADAARALE- 99
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
ML F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 100 ---MLNFTPINGKPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALYD 146
Query: 298 SVC--GEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 349
+ C G + ++ D ++ FV++ E+A AA++ +G ++ + V P
Sbjct: 147 TFCVFGNILSCKVATDASGESKGYGFVQYERDEAAQAAIDKLNGMLMNDKKVYVGP 202
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 231
D+ +Y+ ++D V +++L LF G + C++ D N V R + FV F + E+ +
Sbjct: 317 DKYQNTNLYLKNLDDSVDDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDAS 376
Query: 232 RAALSLAGTMLGFYPVRV 249
RA + M+G P+ V
Sbjct: 377 RALAEMNSKMVGSKPLYV 394
>gi|331219745|ref|XP_003322549.1| hypothetical protein PGTG_04086 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 680
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 12/176 (6%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 236
R T+YV++ + +E + + F G + D R S RF +++FT A AAL
Sbjct: 320 RSTLYVTNFPEDANDEWIRSKFSQFGSIFDVRWPSKRFKSTRRFCYIQFTSPASAEAALQ 379
Query: 237 LAGTMLGFYPVRVLPS-KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
L + + V P K ++ +PT ++ + + +Y T + K V + D++
Sbjct: 380 L-------HNLEVSPKQKMSVLISDPT-RKQTRSDNHANEKELYITCLSKYVQEDDLRKL 431
Query: 296 FESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 350
F S GE++ +R++ D HS AFVEF SA AAL+ + L I V+ S
Sbjct: 432 F-SQFGEIKGVRVVLDQAGHSKGFAFVEFQNEMSAKAALSMNNVELKKRRIGVTIS 486
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+ +Y++ + + V E+ L LF G++ R+ D + FAFVEF +E A+AALS+
Sbjct: 412 KELYITCLSKYVQEDDLRKLFSQFGEIKGVRVVLDQAGHSKGFAFVEFQNEMSAKAALSM 471
Query: 238 AGTMLGFYPVRVLPSKT---AIAPVNPTF-----LPRSEDEREMCSRTIYCTNIDKKVTQ 289
L + V S ++A N TF L + D R SR++ +NI + +
Sbjct: 472 NNVELKKRRIGVTISSAKGLSLARKNTTFKDETKLSSATDHR---SRSVRVSNIAEGTQE 528
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESA 329
I+ FE G+V + + A VEFA+ + A
Sbjct: 529 ALIQQAFEQF-GKVLKTITYPEKNE----ALVEFALEKDA 563
>gi|391332716|ref|XP_003740776.1| PREDICTED: polyadenylate-binding protein 1-like [Metaseiulus
occidentalis]
Length = 660
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 167 RTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FA 221
R +Q+D +R++ V++ ++ + + + + F G ++ CR+ D R +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLHKDIDNKAIFDTFSAFGNILSCRVATDEQGNSRGYG 142
Query: 222 FVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT---- 277
FV F EE A A++ ML +V K F+PRSE ER M +
Sbjct: 143 FVHFETEEAANEAINKVNGML-LNEKKVFVGK---------FVPRSERERMMGDKARLFT 192
Query: 278 -IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFA---MAESAIAA 332
+Y N +++ G +K FE V G++ R++ D +R FV F AE A+
Sbjct: 193 NVYVKNFGEELDDGKLKEMFE-VYGKITSARVMTDQTGKSRGFGFVSFENPDNAEQAVKE 251
Query: 333 LN 334
LN
Sbjct: 252 LN 253
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D VTE L F G V+ R+C D S L +A+V F A AL
Sbjct: 12 SLYVGDLDPDVTESMLFEKFCQAGPVLSIRVCRDMISRRSLGYAYVNFHQPGDAERALD- 70
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
+ F P++ P + + +P+ R+ ++ N+ K + D K F+
Sbjct: 71 ---TMNFEPLKNRPMRIMWSQRDPSL-------RKSGVGNVFIKNLHKDI---DNKAIFD 117
Query: 298 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
S G + R+ D Q ++R FV F E+A A+N +L
Sbjct: 118 TFSAFGNILSCRVATDEQGNSRGYGFVHFETEEAANEAINKVNGML 163
>gi|19922904|ref|NP_611924.1| CG4612, isoform A [Drosophila melanogaster]
gi|386768569|ref|NP_001246493.1| CG4612, isoform C [Drosophila melanogaster]
gi|195353161|ref|XP_002043074.1| GM11822 [Drosophila sechellia]
gi|195586434|ref|XP_002082979.1| GD24944 [Drosophila simulans]
gi|7291799|gb|AAF47219.1| CG4612, isoform A [Drosophila melanogaster]
gi|16648374|gb|AAL25452.1| LD36772p [Drosophila melanogaster]
gi|194127162|gb|EDW49205.1| GM11822 [Drosophila sechellia]
gi|194194988|gb|EDX08564.1| GD24944 [Drosophila simulans]
gi|220946122|gb|ACL85604.1| CG4612-PA [synthetic construct]
gi|220955844|gb|ACL90465.1| CG4612-PA [synthetic construct]
gi|383302680|gb|AFH08246.1| CG4612, isoform C [Drosophila melanogaster]
Length = 307
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 239
+Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 240 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 296
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 175 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 223
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAA-LNCSGAVLG 341
E G + +L+ D + S R FV + +SA+AA + G LG
Sbjct: 224 EPY-GRITSHKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLG 269
>gi|356536490|ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycine max]
Length = 394
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 10/172 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
+YV I TE+ + + F +CG + VDC + A + F E A+ AL+L
Sbjct: 151 IYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRALALD 210
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
G +G +++ P K A F P + E +R IY N+ +T+ +++ FF +
Sbjct: 211 GADMGGLFLKIQPYKATRANKASDFAP---EILEGYNR-IYVGNLSWDITEEELRKFFNN 266
Query: 299 VCGEVQRLRLLGDYQHST--RIAFVEFAMAESAIAALNCSGAVLGSLPIRVS 348
E+ LR D + A V+F ++S AL VL P+R+S
Sbjct: 267 --SEITSLRFGMDKETGEFRGYAHVDFGDSQSLKKALALDQNVLFGRPVRIS 316
>gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|125561054|gb|EAZ06502.1| hypothetical protein OsI_28747 [Oryza sativa Indica Group]
gi|125602953|gb|EAZ42278.1| hypothetical protein OsJ_26851 [Oryza sativa Japonica Group]
Length = 456
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
++YV D+D V + QL +F G VV R+C D N+ L +A+V F+ A AL
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALE- 98
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
ML F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 99 ---MLNFTPINGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALYD 145
Query: 298 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 349
SV G + ++ + ++ FV+F + E+A A++ +G +L + V P
Sbjct: 146 TFSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGP 201
>gi|302920668|ref|XP_003053121.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
gi|256734061|gb|EEU47408.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
Length = 742
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 24/181 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 131 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 190
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 191 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 239
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
+Y NI + T+ D + FE G+V L D + +R FV F ESA A+
Sbjct: 240 FTNVYVKNISPEATEDDFRQLFEQY-GDVTSSSLARDQEGKSRGFGFVNFTTHESAAKAV 298
Query: 334 N 334
+
Sbjct: 299 D 299
>gi|15233246|ref|NP_191094.1| phragmoplastin interacting protein 1 [Arabidopsis thaliana]
gi|7019667|emb|CAB75768.1| putative protein [Arabidopsis thaliana]
gi|332645849|gb|AEE79370.1| phragmoplastin interacting protein 1 [Arabidopsis thaliana]
Length = 597
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 18/191 (9%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEF 225
T N ++D V+ +YV I Q TE+++ + F +CG + VDC++ + + AF+ F
Sbjct: 150 TDNKEEDGVVPNKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRPEDGAFSGIAFITF 209
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER----EMCS--RTIY 279
E+GA+ AL+ +G R L + + P+ +PR + EM +Y
Sbjct: 210 DTEDGAKRALAFDRAAMGD---RYLTIQQYVKTTTPS-IPRRKTSSGFAPEMVDGYNRVY 265
Query: 280 CTNIDKKVTQGDI-KLFFESVCGEVQ--RLRLLGDYQHSTRIAFVEFAMAESAIAALNCS 336
N+ T+ DI KLF + V V+ + + G+++ A V+F + S AL
Sbjct: 266 IGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKG---YAHVDFKDSVSVAIALKLD 322
Query: 337 GAVLGSLPIRV 347
V+ P+++
Sbjct: 323 QQVICGRPVKI 333
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 23/196 (11%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 292
AL+ L F + VN P ++ + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNKRL-FLDKEIK--------VNWATSPGNQPKTDISSHHHIFVGDLSPEIETETL 111
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIR 346
+ F GE+ R++ D H+ + ++FV+ A AE+AI A+N G +GS IR
Sbjct: 112 REAFAPF-GEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIR 167
Query: 347 VSPSKTPVRPRAPRPP 362
+ S + P PR P
Sbjct: 168 TNWSTRKLPP--PREP 181
>gi|116309951|emb|CAH66982.1| H0714H04.9 [Oryza sativa Indica Group]
Length = 704
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 22/192 (11%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+T++V ++ V +EQ+ F G+VVD R + R F VEF E A+ AL L
Sbjct: 446 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL 505
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRS-------EDEREMCSRTIYCTNIDKKVTQG 290
AG L PVR+ +A + P S + + TI+ D +
Sbjct: 506 AGHDLMGRPVRL-----DLARERGAYTPGSGRDNSSFKKPAQSSGNTIFIKGFDTSLDIH 560
Query: 291 DIKLFFES---VCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAVLGSLPI 345
I+ E CGE+ R+ + DY+ S +A+++FA S A +G+ LG +
Sbjct: 561 QIRNSLEEHFGSCGEITRVSIPRDYETGASKGMAYMDFADNGSLSKAYELNGSDLGGYSL 620
Query: 346 RVSPSKTPVRPR 357
V + RPR
Sbjct: 621 YVDEA----RPR 628
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL----GDYQHSTRIAF 320
P S + S+T++ N+ V Q +K FF+ GEV +R G+++
Sbjct: 435 PASNQNQATGSKTLFVGNLPYNVEQEQVKQFFQE-AGEVVDIRFSTFEDGNFRG---FGH 490
Query: 321 VEFAMAESAIAALNCSGAVLGSLPIRV 347
VEFA AE+A AL +G L P+R+
Sbjct: 491 VEFATAEAAKKALELAGHDLMGRPVRL 517
>gi|51969240|dbj|BAD43312.1| putative protein [Arabidopsis thaliana]
Length = 597
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 18/191 (9%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEF 225
T N ++D V+ +YV I Q TE+++ + F +CG + VDC++ + + AF+ F
Sbjct: 150 TDNKEEDGVVPNKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRPEDGAFSGIAFITF 209
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER----EMCS--RTIY 279
E+GA+ AL+ +G R L + + P+ +PR + EM +Y
Sbjct: 210 DTEDGAKRALAFDRAAMGD---RYLTIQQYVKTTTPS-IPRRKTSSGFAPEMVDGYNRVY 265
Query: 280 CTNIDKKVTQGDI-KLFFESVCGEVQ--RLRLLGDYQHSTRIAFVEFAMAESAIAALNCS 336
N+ T+ DI KLF + V V+ + + G+++ A V+F + S AL
Sbjct: 266 IGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKG---YAHVDFKDSVSVAIALKLD 322
Query: 337 GAVLGSLPIRV 347
V+ P+++
Sbjct: 323 QQVICGRPVKI 333
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 23/196 (11%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 292
AL+ L F + VN P ++ + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNKRL-FLDKEIK--------VNWATSPGNQPKTDISSHHHIFVGDLSPEIETETL 111
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIR 346
+ F GE+ R++ D H+ + ++FV+ A AE+AI A+N G +GS IR
Sbjct: 112 REAFAPF-GEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIR 167
Query: 347 VSPSKTPVRPRAPRPP 362
+ S + P PR P
Sbjct: 168 TNWSTRKLPP--PREP 181
>gi|195429621|ref|XP_002062856.1| GK19472 [Drosophila willistoni]
gi|194158941|gb|EDW73842.1| GK19472 [Drosophila willistoni]
Length = 297
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 239
+Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 105 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 164
Query: 240 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 296
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 165 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 213
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAA-LNCSGAVLG 341
E G + +L+ D + S + FV F +SA+AA + G LG
Sbjct: 214 EPY-GRITSHKLMLDEEGRSRKFGFVAFESPQSALAAVIGLHGKQLG 259
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 16/181 (8%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGAR 232
QD RT+YV ++D VTE+ + LF GQ+ C+I +P S + FVEF + A
Sbjct: 7 QDGGQPRTLYVGNLDSGVTEDLVCALFSQMGQIKGCKIIHEPGSD-PYCFVEFVNHSDAS 65
Query: 233 AALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
+A++ + M +RV + +AI P S+ I+ ++ ++ D
Sbjct: 66 SAITAMNARMCLGRELRVNWASSAIQQQTPHRPDTSKHHH------IFVGDLSPQIETSD 119
Query: 292 IKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFAM---AESAIAALNCSGAVLGSLPIR 346
++ F S GE+ R++ D Q S FV F AE+AI ++ G+ LGS IR
Sbjct: 120 LREAF-SPFGEISDCRVVKDATTQKSKGYGFVSFTNKQDAENAIHTMD--GSWLGSRAIR 176
Query: 347 V 347
Sbjct: 177 T 177
>gi|115475838|ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|35215045|dbj|BAC92404.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|35215184|dbj|BAC92537.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|113623484|dbj|BAF23429.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|215694402|dbj|BAG89395.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644698|dbj|BAI39945.1| putative poly(A)-binding protein [Oryza sativa Indica Group]
Length = 660
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
++YV D+D V + QL +F G VV R+C D N+ L +A+V F+ A AL
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALE- 98
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
ML F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 99 ---MLNFTPINGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALYD 145
Query: 298 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 349
SV G + ++ + ++ FV+F + E+A A++ +G +L + V P
Sbjct: 146 TFSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGP 201
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 39/242 (16%)
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATL 198
+GT NG R +S G++R D+ T++V D+ V++ L +
Sbjct: 136 NGTIMPNGGQNFRLNWATFSSGEKR---------HDDSPDYTIFVGDLAADVSDHHLTEV 186
Query: 199 FLT------CGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLP 251
F T +VV R G + FV F DE E RA + G + P+R+ P
Sbjct: 187 FRTRYNSVKGAKVVIDRTTGRTKG---YGFVRFADESEQMRAMTEMQGVLCSTRPMRIGP 243
Query: 252 -------SKTAIAPV-NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 303
++T+ A NP +++E + + TI+ N+D VT +K F + GE+
Sbjct: 244 ASNKNLGTQTSKASYQNPQ--GGAQNENDPNNTTIFVGNLDPNVTDEHLKQVF-TQYGEL 300
Query: 304 QRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
+++ R FV+FA AE A+ LN G +LG +R+S ++P + +
Sbjct: 301 VHVKI----PSGKRCGFVQFADRSSAEEALRVLN--GTLLGGQNVRLSWGRSPANKQTQQ 354
Query: 361 PP 362
P
Sbjct: 355 DP 356
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 39/242 (16%)
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATL 198
+GT NG R +S G++R D+ T++V D+ V++ L +
Sbjct: 136 NGTIMPNGGQNFRLNWATFSSGEKR---------HDDSPDYTIFVGDLAADVSDHHLTEV 186
Query: 199 FLT------CGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLP 251
F T +VV R G + FV F DE E RA + G + P+R+ P
Sbjct: 187 FRTRYNSVKGAKVVIDRTTGRTKG---YGFVRFADESEQMRAMTEMQGVLCSTRPMRIGP 243
Query: 252 -------SKTAIAPV-NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 303
++T+ A NP +++E + + TI+ N+D VT +K F + GE+
Sbjct: 244 ASNKNLGTQTSKASYQNPQ--GGAQNENDPNNTTIFVGNLDPNVTDEHLKQVF-TQYGEL 300
Query: 304 QRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
+++ R FV+FA AE A+ LN G +LG +R+S ++P + +
Sbjct: 301 VHVKI----PSGKRCGFVQFADRSSAEEALRVLN--GTLLGGQNVRLSWGRSPANKQTQQ 354
Query: 361 PP 362
P
Sbjct: 355 DP 356
>gi|451845251|gb|EMD58564.1| hypothetical protein COCSADRAFT_103344 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 85/203 (41%), Gaps = 18/203 (8%)
Query: 160 GKRRMNCRTSN------AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD 213
G R N R +N +D+ +RT++V I Q+ L F G VV+ +I D
Sbjct: 150 GDERRNSRRNNTPPEPEVTEDDRDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVKD 209
Query: 214 --PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRSEDE 270
+VEF DEE AL L G L P+ L P+ +
Sbjct: 210 RVTGRSKGVGYVEFKDEESVPQALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGAAPGA 269
Query: 271 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFA 324
+Y NI VT+ D++ FE GE++++ L D + R + FV+ +
Sbjct: 270 NGAPFHRLYVGNIHFSVTEKDLQEIFEPF-GELEQVILQRDEMNPGRSKGYGFVQFVDPS 328
Query: 325 MAESAIAALNCSGAVLGSLPIRV 347
A++A+A +N G L IRV
Sbjct: 329 HAKNALAEMN--GFELAGRQIRV 349
>gi|350417503|ref|XP_003491454.1| PREDICTED: hypothetical protein LOC100748299 [Bombus impatiens]
Length = 622
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 35/192 (18%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR------------------- 219
RT++V ++ + VT++QL LF G++ R+ G + L
Sbjct: 342 RTIFVGNLPKDVTKKQLQKLFKQFGKIDAIRLRGKISKSLNIPKRVAAITNELHPKMKSV 401
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 279
+A++ F EE + ALS+ G +RV S + ++R ++++
Sbjct: 402 YAYIRFESEESTKKALSVNGRKFEGNYIRVDMSMKS-------------NDRYETKKSVF 448
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF--VEFAMAESAIAALNCSG 337
N+ V ++ F+ CGE+Q +R++ D Q F V F ++ AL G
Sbjct: 449 IGNLHFNVDDDSVRNHFKR-CGEIQSVRIIRDNQTGVGKGFGYVNFKSEDAVALALELDG 507
Query: 338 AVLGSLPIRVSP 349
+ + IRV P
Sbjct: 508 TTILNREIRVKP 519
>gi|171690010|ref|XP_001909937.1| hypothetical protein [Podospora anserina S mat+]
gi|170944960|emb|CAP71071.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 29/191 (15%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ ++L F G V + +I D N +VEF +E+
Sbjct: 173 EDERDRRTVFVQQLAARLRTKELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDS 232
Query: 231 ARAALSLAGTMLGFYPVRVL------------PSKTAIAPVNPTFLPRSEDEREMCSRTI 278
+AAL L G L PV V P T P + F +
Sbjct: 233 VQAALQLTGQKLLGIPVIVQLTEAEKNRQVRNPDATGNHPNSIPF------------HRL 280
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCS 336
Y NI +T+ D++ FE GE++ ++L D +R FV+F A A AL +
Sbjct: 281 YVGNIHFSITEQDLQNVFEPF-GELEFVQLQKDDTGRSRGYGFVQFRDATQAREALEKMN 339
Query: 337 GAVLGSLPIRV 347
G L PIRV
Sbjct: 340 GFDLAGRPIRV 350
>gi|406866575|gb|EKD19615.1| RNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 587
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ ++L F G Q+V R+ G V +VEF +
Sbjct: 186 EDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKN 242
Query: 228 EEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
EE AA+ L G L P+ ++ ++ NP S + ++ +Y NI
Sbjct: 243 EESVPAAIQLTGQKLLGIPIIAQLTEAEKNRQVRNPEAT--SSNPNQIPFHRLYVGNIHF 300
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSL 343
+T+ D++ FE GE++ ++L + Q +R FV+F A AL +G L
Sbjct: 301 SITESDLQNVFEPF-GELEFVQLQKEEQGRSRGYGFVQFRDPSQAREALEKMNGFDLAGR 359
Query: 344 PIRV 347
PIRV
Sbjct: 360 PIRV 363
>gi|395324233|gb|EJF56678.1| RNA-binding protein Prp24 [Dichomitus squalens LYAD-421 SS1]
Length = 1028
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 10/186 (5%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 236
+ T+YV++ ++ ++ + TLF G++ D R S RF +V+FT A AL
Sbjct: 690 KSTLYVTNFPEKADDKFIRTLFGKYGEIFDVRWPSKKFKSTRRFCYVQFTSPTAAEHALE 749
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L GT L K ++ NP D + R +Y + K VT+ D++ F
Sbjct: 750 LNGTELE------ESHKMSVFISNPERRKERTDS-DADDREVYVAGLSKLVTKEDLENLF 802
Query: 297 ESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
++ G V+ +R+ L D S AFVEF A AAL + L + V+ + + VR
Sbjct: 803 KT-YGTVKDVRMILDDKGRSKGFAFVEFETENDARAALAANNHELKQRRMAVTLADSRVR 861
Query: 356 PRAPRP 361
+ P
Sbjct: 862 AKNKAP 867
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 25/162 (15%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 239
TV+V+++ VTE++L TLF CG + + +I PNS++ A VEF D E AAL+
Sbjct: 618 TVFVAEMPAGVTEDELRTLFKDCGSIREIKITQLPNSLV--ATVEFMDRESVPAALTKDK 675
Query: 240 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 299
R+ + A+ T+Y TN +K I+ F
Sbjct: 676 K-------RIRGQEVAVHLA--------------WKSTLYVTNFPEKADDKFIRTLF-GK 713
Query: 300 CGEVQRLRLLG-DYQHSTRIAFVEFAMAESAIAALNCSGAVL 340
GE+ +R ++ + R +V+F +A AL +G L
Sbjct: 714 YGEIFDVRWPSKKFKSTRRFCYVQFTSPTAAEHALELNGTEL 755
>gi|356555656|ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 411
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 37/243 (15%)
Query: 135 IMHT-DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEE 193
I+ T +G NG + R +S G+R ++QD+ T++V D+ VT+
Sbjct: 124 ILQTYNGAIMPNGGQSFRLNWATFSAGER--------SRQDDSPDYTIFVGDLAADVTDY 175
Query: 194 QLATLF------LTCGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYP 246
L F + +VV R+ G + FV F++E E RA + G + P
Sbjct: 176 LLQETFRARYNSVKGAKVVIDRLTGRTKG---YGFVRFSEESEQMRAMTEMQGVLCSTRP 232
Query: 247 VRVLPS--KTAIAPVNP--TFL---PR-SEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
+R+ P+ KT P ++L P+ S++E + + TI+ N+D VT ++ F S
Sbjct: 233 MRIGPASNKTPATQSQPKASYLNSQPQGSQNENDPNNTTIFVGNLDPNVTDDHLRQVF-S 291
Query: 299 VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
GE+ +++ R FV+FA AE A+ LN G +LG +R+S ++P
Sbjct: 292 QYGELVHVKIPA----GKRCGFVQFADRSCAEEALRVLN--GTLLGGQNVRLSWGRSPSN 345
Query: 356 PRA 358
+A
Sbjct: 346 KQA 348
>gi|403162308|ref|XP_003890369.1| hypothetical protein PGTG_21014 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172551|gb|EHS64663.1| hypothetical protein PGTG_21014 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1087
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 12/176 (6%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 236
R T+YV++ + +E + + F G + D R S RF +++FT A AAL
Sbjct: 732 RSTLYVTNFPEDANDEWIRSKFSQFGSIFDVRWPSKRFKSTRRFCYIQFTSPASAEAALQ 791
Query: 237 LAGTMLGFYPVRVLPS-KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
L + + V P K ++ +PT ++ + + +Y T + K V + D++
Sbjct: 792 L-------HNLEVSPKQKMSVLISDPT-RKQTRSDNHANEKELYITCLSKYVQEDDLRKL 843
Query: 296 FESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 350
F S GE++ +R++ D HS AFVEF SA AAL+ + L I V+ S
Sbjct: 844 F-SQFGEIKGVRVVLDQAGHSKGFAFVEFQNEMSAKAALSMNNVELKKRRIGVTIS 898
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+ +Y++ + + V E+ L LF G++ R+ D + FAFVEF +E A+AALS+
Sbjct: 824 KELYITCLSKYVQEDDLRKLFSQFGEIKGVRVVLDQAGHSKGFAFVEFQNEMSAKAALSM 883
Query: 238 AGTMLGFYPVRVLPSKT---AIAPVNPTF-----LPRSEDEREMCSRTIYCTNIDKKVTQ 289
L + V S ++A N TF L + D R SR++ +NI + +
Sbjct: 884 NNVELKKRRIGVTISSAKGLSLARKNTTFKDETKLSSATDHR---SRSVRVSNIAEGTQE 940
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESA 329
I+ FE G+V + + A VEFA+ + A
Sbjct: 941 ALIQQAFEQF-GKVLKTITYPEKNE----ALVEFALEKDA 975
>gi|357145576|ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 20/176 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D V + QL +F G VV R+C D N+ L +A+V F+ A A+
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAME- 101
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
ML F PV P + + +P+ R+ + I+ N+DK + D K F+
Sbjct: 102 ---MLNFTPVNGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALFD 148
Query: 298 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 349
S G + ++ + ++ FV++ ESA A+N +G +L + V P
Sbjct: 149 TFSAFGTILSCKVATEISGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGP 204
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 181 VYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 237
+Y+ ++D V + E+L LF G + C++ D N V + + FV F + E+ +RA +++
Sbjct: 326 LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDASRALVAM 385
Query: 238 AGTMLGFYPVRV 249
G M+G P+ V
Sbjct: 386 NGKMVGSKPLYV 397
>gi|224060514|ref|XP_002300227.1| predicted protein [Populus trichocarpa]
gi|222847485|gb|EEE85032.1| predicted protein [Populus trichocarpa]
Length = 644
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 16/177 (9%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAA 234
+ ++YV D++ VT+ QL LF GQVV R+C D S L + +V +++ + A A
Sbjct: 23 VTTSLYVGDLEASVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAARA 82
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L ML F P+ P + + +PT R+ + I+ N+DK + +
Sbjct: 83 LE----MLNFTPLNGSPIRVMYSHRDPTI-------RKSGAGNIFIKNLDKAIDHKALHD 131
Query: 295 FFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
F S G + ++ D S FV+F E+A A+ +G +L + V P
Sbjct: 132 TF-SAFGNILSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLNGMLLNDKQVYVGP 187
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D + +E+L LF G + C++ DPN + R + FV F T EE +RA L +
Sbjct: 309 LYIKNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEMN 368
Query: 239 GTMLGFYPVRV 249
G ++ P+ V
Sbjct: 369 GKIVVSKPLYV 379
>gi|221111756|ref|XP_002159647.1| PREDICTED: RNA-binding protein 39-like [Hydra magnipapillata]
Length = 528
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 13/206 (6%)
Query: 151 RRKRNGYSQ----GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 206
RR R+G + R + Q+E RTV++ + +QVT + F GQV
Sbjct: 152 RRSRDGVTTISLLSDREREWDEEHVSQEERDSRTVFIMQLAKQVTIRDIQDFFSKVGQVR 211
Query: 207 DCRICGDPNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
D R+ D NS +VEFTD A+ L+G L P+ V P+ +A N
Sbjct: 212 DVRLISDRNSRRSKGIGYVEFTDASAVTLAIKLSGQKLLGVPIMVSPT---MAEKNRYAA 268
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVE 322
++ + +Y ++ +T+ ++ FE G V+ ++L D + S FV
Sbjct: 269 AQAALVKPQGPMKLYVGSLHYNITEPMLRAIFEP-FGTVESVQLQYDSETNRSKGFGFVN 327
Query: 323 FAMAESAIAAL-NCSGAVLGSLPIRV 347
F A +A A+ +G L P++V
Sbjct: 328 FREAGAAKRAMEQMNGFELAGRPMKV 353
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFA 324
S++ER+ SRT++ + K+VT DI+ FF V G+V+ +RL+ D + S I +VEF
Sbjct: 177 SQEERD--SRTVFIMQLAKQVTIRDIQDFFSKV-GQVRDVRLISDRNSRRSKGIGYVEFT 233
Query: 325 MAESAIAALNCSGAVLGSLPIRVSPS 350
A + A+ SG L +PI VSP+
Sbjct: 234 DASAVTLAIKLSGQKLLGVPIMVSPT 259
>gi|22329932|ref|NP_174676.2| poly(A) binding protein 1 [Arabidopsis thaliana]
gi|332193555|gb|AEE31676.1| poly(A) binding protein 1 [Arabidopsis thaliana]
Length = 407
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 236
R V+V ++D+ + +QL +F G+V+ C++ D + V + + FV+F + A +
Sbjct: 30 RGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACN 89
Query: 237 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
GT++ + V P F+ R + ++ +Y N+ + T D+K
Sbjct: 90 FHNGTLIRNQHIHVCP-----------FVSRGQWDKSRVFTNVYVKNLVETATDADLKRL 138
Query: 296 FESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVL 340
F GE+ ++ D + S R FV F AE+A+ A+ V+
Sbjct: 139 FGEF-GEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVV 183
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF-TDEEGARAALSLA 238
+YV ++D V +L LF G + C++ N + + FVEF T EE ++A L +
Sbjct: 225 LYVKNLDDSVDNTKLEELFSEFGTITSCKVMVHSNGISKGVGFVEFSTSEEASKAMLKMN 284
Query: 239 GTMLGFYPVRV 249
G M+G P+ V
Sbjct: 285 GKMVGNKPIYV 295
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 109/247 (44%), Gaps = 37/247 (14%)
Query: 135 IMHT-DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEE 193
I+ T +G NG + R +S G+R ++ D+ T++V D+ VT+
Sbjct: 123 ILQTYNGAIMPNGGQSFRLNWATFSAGER--------SRHDDSPDYTIFVGDLAADVTDY 174
Query: 194 QLATLF------LTCGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYP 246
L F + +VV R+ G + FV F+DE E RA + G + P
Sbjct: 175 LLQETFRARYNSVKGAKVVIDRLTGRTKG---YGFVRFSDESEQVRAMTEMQGVLCSTRP 231
Query: 247 VRVLPS--KTAIAPVNPTFLPR------SEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
+R+ P+ KT P + S++E + + TI+ N+D VT ++ F S
Sbjct: 232 MRIGPASNKTPTTQSQPKASYQNSQPQGSQNENDPNNTTIFVGNLDPNVTDDHLRQVF-S 290
Query: 299 VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
GE+ +++ R FV+FA AE A+ LN G +LG +R+S ++P
Sbjct: 291 QYGELVHVKIPA----GKRCGFVQFADRSCAEEALRVLN--GTLLGGQNVRLSWGRSPSN 344
Query: 356 PRAPRPP 362
+A P
Sbjct: 345 KQAQADP 351
>gi|124806145|ref|XP_001350640.1| polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|23496765|gb|AAN36320.1|AE014847_47 polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|119352249|gb|ABL63812.1| polyadenylate-binding protein [Plasmodium falciparum]
Length = 875
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 24/178 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR----FAFVEFTDEEGARAAL 235
++YV D+++ VTE L +F T G V R+C D SV R +A+V + + A AL
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRD--SVTRKSLGYAYVNYHNLADAERAL 74
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
L + ++ P++ + +P+ R+ + I+ N+DK + D K
Sbjct: 75 D----TLNYTNIKGQPARLMWSHRDPSL-------RKSGTGNIFVKNLDKSI---DNKAL 120
Query: 296 FE--SVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
F+ S+ G + ++ D + S FV + ESA A+ +G LGS + V P
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGVQLGSKNVYVGP 178
>gi|167517070|ref|XP_001742876.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779500|gb|EDQ93114.1| predicted protein [Monosiga brevicollis MX1]
Length = 1825
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 90/198 (45%), Gaps = 30/198 (15%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDE 228
A + E RTV+V ++D VTE++L F CG++VD R+ + + +A++EF
Sbjct: 641 QAHKVEAEDRTVFVKNLDFSVTEDELRARFADCGEIVDVRMPFNHKGKAKGYAYLEFASA 700
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-----------RT 277
ALS ++G P + R D +M S ++
Sbjct: 701 SAVNPALSKDRQIMG---------------TRPMLVDRYVDRSQMPSLPFKHTTDKNPKS 745
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAM-AESAIAALNC 335
++ N+D K ++ +IK F G V+ +RL+ + S R +V+F A++A A
Sbjct: 746 LFVKNLDYKASEAEIKDLFNK-HGAVEAVRLVTKFDGSRRDFCYVDFVTEADAAKAQAAL 804
Query: 336 SGAVLGSLPIRVSPSKTP 353
G +L +RV+ SK P
Sbjct: 805 DGHMLHGRALRVNISKPP 822
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
PR + E RT++ N+D VT+ +++ F CGE+ +R+ +++ + A++EF
Sbjct: 639 PRQAHKVEAEDRTVFVKNLDFSVTEDELRARFAD-CGEIVDVRMPFNHKGKAKGYAYLEF 697
Query: 324 AMAESAIAALNCSGAVLGSLPIRV 347
A A + AL+ ++G+ P+ V
Sbjct: 698 ASASAVNPALSKDRQIMGTRPMLV 721
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 94/190 (49%), Gaps = 21/190 (11%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDTSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 292
AL+ L F + VN P ++ + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNKRL-FLEKEIK--------VNWATSPGNQPKTDISSHHHIFVGDLSPEIETETL 111
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIR 346
+ F GE+ R++ D H+ + ++FV+ A AE+AI A+N G +GS IR
Sbjct: 112 REAFAPF-GEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIR 167
Query: 347 VSPSKTPVRP 356
+ S + P
Sbjct: 168 TNWSTRKLPP 177
>gi|452002199|gb|EMD94657.1| hypothetical protein COCHEDRAFT_1092247 [Cochliobolus
heterostrophus C5]
Length = 572
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 88/214 (41%), Gaps = 40/214 (18%)
Query: 160 GKRRMNCRTSNA------QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD 213
G R N R +N +D+ +RT++V I Q+ L F G VV+ +I D
Sbjct: 153 GDERRNSRRNNTPPEPEITEDDRDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVKD 212
Query: 214 --PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV-----------RVLPSKTAIAP-V 259
+VEF DEE AL L G L P+ PS+ AP
Sbjct: 213 RVTGRSKGVGYVEFKDEESVPQALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGTAPGA 272
Query: 260 NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-- 317
N R +Y NI VT+ D++ FE GE++++ L D + R
Sbjct: 273 NGAPFHR-----------LYVGNIHFSVTEKDLQEIFEPF-GELEQVILQRDEMNPGRSK 320
Query: 318 ----IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
+ FV+ + A++A+A +N G L IRV
Sbjct: 321 GYGFVQFVDPSHAKNALAEMN--GFELAGRQIRV 352
>gi|296425387|ref|XP_002842223.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638484|emb|CAZ86414.1| unnamed protein product [Tuber melanosporum]
Length = 1133
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 75/161 (46%), Gaps = 17/161 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
T+YV++ E + LF CG++VD R NS RF +V+F + A+ A SL
Sbjct: 747 TLYVTNFPPTADETCIRDLFKDCGEIVDIRFPSLKYNSHRRFCYVQFASSDEAQKATSLH 806
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC---SRTIYCTNIDKKVTQGDIKLF 295
G LG +T +A ++ P + ER R +Y NID + D++
Sbjct: 807 GKQLG-------GKETLVAKISA---PDQKHERSGAVYEGREVYIRNIDFQAHDNDVQEL 856
Query: 296 FESVCGEVQRLRLLGDYQHSTR--IAFVEFAMAESAIAALN 334
F+ G ++++RL + T FV F+ E A+AA+
Sbjct: 857 FQKY-GRIEKVRLPPGPKKGTHKGYGFVTFSAKEEALAAVE 896
>gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 20/176 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D V + QL +F G VV R+C D N+ L +A+V F+ A AL
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE- 101
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
ML F PV P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 102 ---MLNFTPVNGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALYD 148
Query: 298 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 349
S G + ++ + ++ FV++ ESA A+N +G +L + V P
Sbjct: 149 TFSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGP 204
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 181 VYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 237
+Y+ ++D V + E+L LF G + C++ D N V + + FV F + E+ RA +++
Sbjct: 326 LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAM 385
Query: 238 AGTMLGFYPVRV 249
G M+G P+ V
Sbjct: 386 NGKMVGSKPLYV 397
>gi|19113513|ref|NP_596721.1| RNA-binding protein Prp24 (predicted) [Schizosaccharomyces pombe
972h-]
gi|74698432|sp|Q9USY2.1|YOW4_SCHPO RecName: Full=Uncharacterized RNA-binding protein C1861.04c
gi|5734577|emb|CAB52740.1| RNA-binding protein Prp24 (predicted) [Schizosaccharomyces pombe]
Length = 1014
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 11/173 (6%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLAG 239
+YV++ E + LF G VVD R N+ RF +V+ + A AL L
Sbjct: 668 LYVTNFPPTYDELDITKLFSAYGNVVDVRFPSLRYNTNRRFCYVQMRKPDEAHNALQLHK 727
Query: 240 TMLG-FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
+L YP++V S P+ T PRS E R +Y TNID KV + D++ FF
Sbjct: 728 KLLEEKYPIQVFISD----PLRRT--PRSGAVYE--GRELYVTNIDFKVNEKDVETFFRD 779
Query: 299 VCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
G+V+ +R+ + +V + A AL+ +G LG+ + V SK
Sbjct: 780 Y-GQVESVRIPKRFNQHKGFGYVVMTTNQDAENALSAAGKQLGNRVLNVVLSK 831
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 26/191 (13%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
R +YV++ID +V E+ + T F GQV RI N F +V T + A ALS A
Sbjct: 757 RELYVTNIDFKVNEKDVETFFRDYGQVESVRIPKRFNQHKGFGYVVMTTNQDAENALSAA 816
Query: 239 GTMLGFYPVRVLPS-------KTAIAPVNPTFLPRSEDERE-------------MCSRTI 278
G LG + V+ S KT ++ + L +S + E + S+++
Sbjct: 817 GKQLGNRVLNVVLSKPRESLEKTRVSSNDNRTLAKSFETTESNKMSTPKKSFEQIKSKSL 876
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA-MAESAIAALNCSG 337
TN+D V + ++ FES G++ R+ L +++ A VEF + ++ A+L G
Sbjct: 877 GVTNVDGTVNEARLRSLFESY-GKLYRVVLHPEHEG----AVVEFLDIHDAGKASLALEG 931
Query: 338 AVLGSLPIRVS 348
+G + ++
Sbjct: 932 HEIGGRLLHIT 942
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAE 327
E R T+ TN+ +++ ++K+FF+ CG + R+ +L D Q ++A +EF+
Sbjct: 582 EQHRNREELTVLVTNLPSDISENELKIFFKD-CGNIIRIFILEDNQKDVKVAQIEFSETS 640
Query: 328 SAIAA 332
+AA
Sbjct: 641 EVLAA 645
>gi|452986581|gb|EME86337.1| hypothetical protein MYCFIDRAFT_97432, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 540
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 25/195 (12%)
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVE 224
+T DE RRTV+V + ++ +L F G VVD +I D S +VE
Sbjct: 146 KTPEPTDDERDRRTVFVQQLAARLRSRELKEFFQQVGDVVDAQIVKDRVSGRSKGVGYVE 205
Query: 225 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--------R 276
F +EE + A+ L G L P+ IA + R E +
Sbjct: 206 FKEEESVQKAIQLTGQKLLGIPI--------IAQLTEAEKNRQARNTEGTATQSNGIPFH 257
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAA 332
+Y NI +T+ D+K FE GE++ ++L + ++ + F++ A A+ A+
Sbjct: 258 RLYVGNIHFSITEDDLKNVFEPF-GELEFVQLQKEEAGRSKGYGFVQFIDPAQAKEALEK 316
Query: 333 LNCSGAVLGSLPIRV 347
+N G L PIRV
Sbjct: 317 MN--GFELAGRPIRV 329
>gi|449445890|ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 654
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 18/178 (10%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTD-EEGARA 233
+ ++YV D+D VT+ QL +F GQVV R+C D + L + +V +++ ++ ARA
Sbjct: 27 VTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARA 86
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L T L P+RV+ S R R+ + I+ N+DK + +
Sbjct: 87 LDVLNFTPLNGKPIRVMYSH------------RDPSIRKSGAGNIFIKNLDKAIDHKALH 134
Query: 294 LFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
F S G + ++ D S FV+F ESA+ A+ +G +L + V P
Sbjct: 135 DTF-SAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGMLLNDKQVYVGP 191
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 24/109 (22%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D + +++L LF G + C++ DPN + R + FV F T +E +RA + +
Sbjct: 313 LYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALVEMN 372
Query: 239 GTML----------------------GFYPVRVLPSKTAIAPVNPTFLP 265
G M+ F +R +P ++AP P + P
Sbjct: 373 GKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYPP 421
>gi|356575464|ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 600
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 83/185 (44%), Gaps = 20/185 (10%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL 235
+R V+ I + E + F G+V D R+ D NS ++EF D A+
Sbjct: 225 QRAVFAYQISLKADERDVFEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 284
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPT----------FLPRSEDEREMCSRTIYCTNIDK 285
+L+G L PV V PS+ V T P S +R +Y N+
Sbjct: 285 ALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYS-----GGARKLYVGNLHI 339
Query: 286 KVTQGDIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAV-LGSL 343
+T+ DI+ FE+ G+V+ ++L L + H FV+FA E A A + +G + +G
Sbjct: 340 SITEADIRRVFEAF-GQVELVQLPLDESGHCKGFGFVQFARLEDARNAQSLNGQLEIGGR 398
Query: 344 PIRVS 348
I+VS
Sbjct: 399 TIKVS 403
>gi|170057956|ref|XP_001864710.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
gi|167877220|gb|EDS40603.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
Length = 661
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 87/179 (48%), Gaps = 10/179 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
VYV I ++ E+ + FL G + + DP + FAFVE+ EGA+ AL +
Sbjct: 175 VYVGSISFELKEDTIRAAFLPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 234
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G MLG ++V + + P + ++E + +R IY +I +T+ DIK FE
Sbjct: 235 NGAMLGGRNIKV--GRPSNMPQAQQVIDEIQEEAKNYNR-IYIASIHPDLTEEDIKSVFE 291
Query: 298 SVCGEVQRLRL-LGDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 353
+ G + ++ G HS + AF+E+ +SAI A+ LG +RV S TP
Sbjct: 292 AF-GAIATCKMSQGSSAHSHKGYAFIEYQTNQSAIEAIASMNLFDLGGQLLRVGRSITP 349
>gi|224059164|ref|XP_002299747.1| predicted protein [Populus trichocarpa]
gi|222847005|gb|EEE84552.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 26/197 (13%)
Query: 167 RTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAF 222
R Q+D R+T ++V ++D ++ L ++F G ++ C++ G+ F F
Sbjct: 89 RIMWCQRDPFARKTGFANLFVKNLDFSISSSCLESIFSKYGTILSCKVAGENGRSKGFGF 148
Query: 223 VEFTDEEGARAA-LSLAGTMLGFYPVRVLP-----SKTAIAPVNPTFLPRSEDEREMCSR 276
V+F ++ A A +L TMLG + V +TA AP
Sbjct: 149 VQFESQDSALVAQTALHDTMLGGKKLHVCKFVKKTERTAAAPCE-------------VFT 195
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNC 335
+Y N+D+ +T+ +K F SV G+V + ++ D++ S FV F + A A++
Sbjct: 196 NLYVKNLDETITEDGLKDMF-SVVGDVSSVAIMMDHEGKSKHFGFVNFKSPDDAKKAVDV 254
Query: 336 -SGAVLGSLPIRVSPSK 351
+G+V+GS + V ++
Sbjct: 255 MNGSVIGSKTLFVGKAQ 271
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 74/166 (44%), Gaps = 18/166 (10%)
Query: 172 QQDEVIRR--TVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVE-FT 226
+ +V++R ++YV D+D +VTE L F G + R+ C L +A+V ++
Sbjct: 8 WKQQVLQRGASLYVGDLDPEVTETDLRAAFYHVGPISSLRLCRCRLTGKSLCYAYVNLYS 67
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 286
+ +RA L T L P+R++ + R R+ ++ N+D
Sbjct: 68 HAQASRALGLLNHTNLKGKPMRIM------------WCQRDPFARKTGFANLFVKNLDFS 115
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA 332
++ ++ F S G + ++ G+ S FV+F +SA+ A
Sbjct: 116 ISSSCLESIF-SKYGTILSCKVAGENGRSKGFGFVQFESQDSALVA 160
>gi|357519763|ref|XP_003630170.1| RNA-binding protein [Medicago truncatula]
gi|355524192|gb|AET04646.1| RNA-binding protein [Medicago truncatula]
Length = 567
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 29/217 (13%)
Query: 151 RRKRNGYSQGKRRMNCRTSNAQQD---EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 207
R +R+ ++ RR + N + + E +RTV+ + + TE + F G+V D
Sbjct: 171 RGERDFENRDGRRFRDKKENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRD 230
Query: 208 CRICGDPNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK-----------T 254
R+ D NS ++EF D A++L+G +L PV V PS+ +
Sbjct: 231 VRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASS 290
Query: 255 AIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ- 313
A V P R +Y N+ +T+ +++ FE G+++ ++L D +
Sbjct: 291 GAAVVGPY---------GAVDRKLYVGNLHFNMTEANLREIFEPF-GQIEVVQLPLDMET 340
Query: 314 -HSTRIAFVEFAMAESAIAALNCSGAV-LGSLPIRVS 348
H FV+FA E A AA + +G + + I+VS
Sbjct: 341 GHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTIKVS 377
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVE 322
P ++ ER+ RT++ + K T+ D+ FF S G+V+ +RL+ D + S + ++E
Sbjct: 193 PEADPERD--QRTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIE 249
Query: 323 FAMAESAIAALNCSGAVLGSLPIRVSPSK 351
F A S A+ SG +L P+ V PS+
Sbjct: 250 FYDAMSVPMAIALSGQLLLGQPVMVKPSE 278
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 21/195 (10%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
AL+ L + + + A +P N P+++ I+ ++ ++ ++
Sbjct: 61 ALTAMNKRL--FLEKEIKVNWATSPGNQ---PKTDISSH---HHIFVGDLSPEIETETLR 112
Query: 294 LFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
F GE+ R++ D H+ + ++FV+ A AE+AI A+N G +GS IR
Sbjct: 113 EAFAPF-GEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRT 168
Query: 348 SPSKTPVRPRAPRPP 362
+ S + P PR P
Sbjct: 169 NWSTRKLPP--PREP 181
>gi|168057049|ref|XP_001780529.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668007|gb|EDQ54623.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 647
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 231
++ + +VYV D++ V+E QL +F G VV R+C D L +A+V + + A
Sbjct: 19 NQFVSTSVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSAQDA 78
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
AL L L F PV P + + +P+ R+ + I+ N+DK +
Sbjct: 79 TRALEL----LNFTPVNGKPIRIMFSHRDPSL-------RKSGAANIFIKNLDKAIDNKA 127
Query: 292 IKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
+ F S G + ++ D S FV+F ESA +A+ +G +L + V P
Sbjct: 128 LHDTF-SAFGGILSCKVATDSSGQSKGYGFVQFEKEESAQSAIEKVNGMLLNDKQVFVGP 186
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D V +E+L LF G + C++ DP R + FV F T EE RA +
Sbjct: 308 LYLKNLDDAVDDEKLRELFAEYGTITSCKVMKDPQGQSRGSGFVAFSTPEEATRAVTEMN 367
Query: 239 GTMLGFYPVRVLPS-----------------KTAIAPVNPTFLP 265
M+G P+ V + +T + P PT LP
Sbjct: 368 TKMVGSKPLYVALAQRKEERRVRLQAAFAQMRTPVGPTVPTSLP 411
>gi|18416906|ref|NP_567764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331668|sp|Q93W34.1|RP45C_ARATH RecName: Full=Polyadenylate-binding protein RBP45C;
Short=Poly(A)-binding protein RBP45C; AltName:
Full=RNA-binding protein 45C; Short=AtRBP45C
gi|13878153|gb|AAK44154.1|AF370339_1 putative DNA binding protein [Arabidopsis thaliana]
gi|15450814|gb|AAK96678.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17104569|gb|AAL34173.1| putative DNA binding protein [Arabidopsis thaliana]
gi|20259888|gb|AAM13291.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332659882|gb|AEE85282.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 415
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 106/268 (39%), Gaps = 57/268 (21%)
Query: 133 NFIMHTDG-TANTNGHTTTRRKRNGYSQG----------KRRMNCRTSNA---------- 171
N++M+ G T R K+NGYS+G N +T N
Sbjct: 94 NYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTYNGAPMPSSEQAF 153
Query: 172 ------------QQDEVIRRTVYVSDIDQQVTEEQLATLF------LTCGQVVDCRICGD 213
+Q E TV+V D+ VT+ L F + +VV+ R G
Sbjct: 154 RLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGR 213
Query: 214 PNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLPSKT----AIAPVNPTFLPRSE 268
+ FV F DE E RA + G P+R P+ + P + +
Sbjct: 214 SKG---YGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNS 270
Query: 269 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF---AM 325
E + + TI+ +D+ VT+ D+K F GE+ +++ R FV++ A
Sbjct: 271 GESDPTNTTIFVGAVDQSVTEDDLKSVFGQF-GELVHVKIPA----GKRCGFVQYANRAC 325
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKTP 353
AE A++ LN G LG IR+S ++P
Sbjct: 326 AEQALSVLN--GTQLGGQSIRLSWGRSP 351
>gi|340517112|gb|EGR47358.1| polyadenylate-binding protein [Trichoderma reesei QM6a]
Length = 745
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 24/180 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 130 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 189
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 190 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKAN 238
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
+Y NI VT D + FE G+V L D + TR FV F E+A A+
Sbjct: 239 FTNVYVKNIAPDVTDEDFRQLFEKF-GDVTSSSLARDQEGKTRGFGFVNFTTHEAAFKAV 297
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 18/173 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + + +G +A
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEE 119
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 120 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDVAIDNKALHDTF 167
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
+ G + ++ D +++ FV + E+A A+ + +G +L + V
Sbjct: 168 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYV 219
>gi|356499763|ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 646
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 18/180 (10%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTD-EEGA 231
+ + ++YV D+D VT+ QL LF GQVV R+C D S L + +V F++ ++ A
Sbjct: 24 QFVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAA 83
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
RA L T L P+R++ S R R+ I+ N+D+ +
Sbjct: 84 RALDVLNFTPLNNRPIRIMYSH------------RDPSIRKSGQGNIFIKNLDRAIDHKA 131
Query: 292 IKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
+ F S G + ++ D S FV+F ESA A+ +G +L + V P
Sbjct: 132 LHDTF-STFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGP 190
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+YV ++D + +++L LF G + C++ DPN + R + FV F T +E +RA L +
Sbjct: 312 LYVKNLDDSLGDDKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALLEMN 371
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
G M+ P+ V T R ED R
Sbjct: 372 GKMVVSKPLYV------------TLAQRKEDRR 392
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 16/174 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDE-EGARAALS 236
++YV D++ V++ QL LF GQVV R+C D S L +A+V F + + ARA
Sbjct: 41 SLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFNNPLDAARALEV 100
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L L P+RV+ S R R S I+ N+DK + + F
Sbjct: 101 LNFAPLNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDKMIDNKSLHETF 148
Query: 297 ESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
S + + + S FV++ E+A A+ + +G ++ P+ V P
Sbjct: 149 SSFGTILSCKVAMDEGGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGP 202
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 220
KRR +A D+ +Y+ ++D + ++QL LF G++ C++ D N + +
Sbjct: 305 KRRFEQILKDAA-DKYQGLNLYLKNLDDSIGDDQLRELFSNFGKITSCKVMRDQNGLSKG 363
Query: 221 A-FVEF-TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC 274
+ FV F T EE ++A + G M+ P+ V F R ED + M
Sbjct: 364 SGFVAFSTREEASQALTEMNGKMISGKPLYV------------AFAQRKEDRKAML 407
>gi|297832034|ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
gi|297329739|gb|EFH60158.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
Length = 655
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 76/175 (43%), Gaps = 18/175 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD-EEGARAALS 236
++YV D+D VT+ QL F GQVV R+C D L + +V FT ++ ARA
Sbjct: 41 SLYVGDLDPNVTDSQLFDAFSQMGQVVSVRVCRDLATRRSLGYGYVNFTSPQDAARAIQE 100
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L L PVRV+ S R R + I+ N+DK + + F
Sbjct: 101 LNYIPLNGKPVRVMYSH------------RDPSVRRSGAGNIFIKNLDKSIDHKALHDTF 148
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
SV G + ++ D S FV++ ESA A+ +G +L + V P
Sbjct: 149 -SVFGNIISCKVAVDSSGQSKGYGFVQYETEESAQKAMGQLNGMLLNDKQVYVGP 202
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 125 PNGFGYTN--NFIMHTDGTANTNGHTTTRRKR-NGYSQGK--RRMNCRTSNAQQ-----D 174
P GFG+ N N + NG T ++ G +Q K R M + Q D
Sbjct: 258 PKGFGFVNFENADDAAKAVESLNGKTFDDKEWFVGRAQKKSEREMELKVQYEQSLKEAAD 317
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGAR 232
+ +YV ++D V++E+L LF G V C++ DPN + R + FV F T EE +
Sbjct: 318 KFQSSNLYVKNLDDSVSDEKLKELFTPYGTVTSCKVMRDPNGMSRGSGFVAFSTPEEATK 377
Query: 233 AALSLAGTMLGFYPVRV 249
A ++G M+ P+ V
Sbjct: 378 AMSEMSGKMIENKPLYV 394
>gi|398327|emb|CAA81127.1| poly(A)-mRNA binding protein [Anemia phyllitidis]
Length = 638
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
++YV D+D V+E +L +F GQVV R+C D L +A+V + + A AL L
Sbjct: 27 SLYVGDLDPDVSESELYEVFNQIGQVVSIRVCRDLMTKKSLGYAYVNYGTHQDASQALEL 86
Query: 238 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
T++ P+R++ S R R+ + I+ N++K + + F
Sbjct: 87 LNFTLVKGKPIRIMYSH------------RDPSIRKSGAANIFIKNLEKSIDNKALHDTF 134
Query: 297 ESVCGEVQRLR-LLGDYQHSTRIAFVEFAMAESA-IAALNCSGAVLGSLPIRVSP 349
S G + R ++ D +S FV+F ESA IA +G ++ + V+P
Sbjct: 135 -SAFGTILSCRVVMDDAGNSKGYGFVQFEKEESAQIAIEKVNGMLINDRQVSVAP 188
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 9/186 (4%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSLA 238
VYV ++ + T+E L +F G + + D + + F FV F + ++ A A +L
Sbjct: 206 VYVKNLAEATTDEDLRKVFAGFGPISSAVVMRDADGKSKCFGFVNFENVDDAANAVENLN 265
Query: 239 GTMLG---FYPVRVLPSKTAIAPVNPTFLP-RSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
G ++ +Y R A + F R E E + +Y NID + ++
Sbjct: 266 GKLINEKEWYVGRAQKKSEREAELKAKFEQVRKEKEEKFQGVNLYLKNIDDSIDDEKLRE 325
Query: 295 FFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVSPSKT 352
F +V G V +++ Q S FV F+ E A+ A+N +G ++GS P+ V+ ++
Sbjct: 326 LF-AVFGTVTSCKVMKSPQGQSMGSGFVTFSAPEEAMQAVNDMNGKMVGSKPLYVALAQR 384
Query: 353 PVRPRA 358
RA
Sbjct: 385 KEERRA 390
>gi|224105583|ref|XP_002313862.1| predicted protein [Populus trichocarpa]
gi|222850270|gb|EEE87817.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 16/177 (9%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAA 234
+ ++YV D++ VT+ QL LF GQVV R+C D S L + +V +++ + A A
Sbjct: 23 VTTSLYVGDLEANVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAARA 82
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L + L F PV P + + +P+ R+ + I+ N+DK + +
Sbjct: 83 LEV----LNFTPVNGSPIRVMYSHRDPSV-------RKSGAGNIFIKNLDKAIDHKALHD 131
Query: 295 FFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
F SV G + ++ D S FV+F E+A A+ +G +L + V P
Sbjct: 132 TF-SVFGNILSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLNGMLLNDKQVYVGP 187
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D + +E++ LF G + C++ DPN + R + FV F T EE +RA L +
Sbjct: 309 LYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEMN 368
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 369 GKMVASKPLYV 379
>gi|356521524|ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 651
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 81/180 (45%), Gaps = 18/180 (10%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTD-EEGA 231
+ + ++YV D+D VT+ QL LF GQVV R+C D S L + +V F++ ++ A
Sbjct: 27 QFVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAA 86
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
RA L T L P+R++ S R R+ I+ N+D+ +
Sbjct: 87 RALDVLNFTPLNNRPIRIMYSH------------RDPSIRKSGQGNIFIKNLDRAIDHKA 134
Query: 292 IKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
+ F S G + ++ D S FV+F ESA A+ +G +L + V P
Sbjct: 135 LHDTF-STFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGP 193
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+YV ++D + +E+L LF G + C++ DPN + R + FV F T EE +RA L +
Sbjct: 315 LYVKNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGLSRGSGFVAFSTPEEASRALLEMN 374
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
G M+ P+ V T R ED R
Sbjct: 375 GKMVVSKPLYV------------TLAQRKEDRR 395
>gi|303284403|ref|XP_003061492.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456822|gb|EEH54122.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 525
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
+++T++V ++ VT EQL T+F CG V DCRI + F FVE+ E A A L
Sbjct: 177 LQKTLHVGNLAPGVTVEQLRTIFAFCGVVTDCRIANEKA----FGFVEYATHEQALAGLG 232
Query: 237 LAGTMLGFYPVRVLPSKT 254
L G L P+RV SKT
Sbjct: 233 LNGLALEDRPLRVEMSKT 250
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
+T++ N+ VT ++ F + CG V R+ + FVE+A E A+A L
Sbjct: 179 KTLHVGNLAPGVTVEQLRTIF-AFCGVVTDCRI----ANEKAFGFVEYATHEQALAGLGL 233
Query: 336 SGAVLGSLPIRVSPSKT 352
+G L P+RV SKT
Sbjct: 234 NGLALEDRPLRVEMSKT 250
>gi|449487626|ref|XP_004157720.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101203535
[Cucumis sativus]
Length = 936
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 11/94 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
+ ++RT+ VS++ +T EQL LF CG VV+C I + FA++E++ E A AA
Sbjct: 334 DALKRTLQVSNLSPLLTVEQLKQLFXFCGTVVECTITDSKH----FAYIEYSKPEEATAA 389
Query: 235 LSLAGTMLGFYPVRV-----LPSKTAIAPVNPTF 263
L+L +G P+ V LP K A A NP+
Sbjct: 390 LALNNMDVGGRPLNVEMAKSLPQKPAAA--NPSL 421
>gi|4455223|emb|CAB36546.1| putative DNA binding protein [Arabidopsis thaliana]
gi|7269553|emb|CAB79555.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 427
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 106/268 (39%), Gaps = 57/268 (21%)
Query: 133 NFIMHTDG-TANTNGHTTTRRKRNGYSQG----------KRRMNCRTSNA---------- 171
N++M+ G T R K+NGYS+G N +T N
Sbjct: 94 NYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTYNGAPMPSSEQAF 153
Query: 172 ------------QQDEVIRRTVYVSDIDQQVTEEQLATLF------LTCGQVVDCRICGD 213
+Q E TV+V D+ VT+ L F + +VV+ R G
Sbjct: 154 RLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGR 213
Query: 214 PNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLPSKT----AIAPVNPTFLPRSE 268
+ FV F DE E RA + G P+R P+ + P + +
Sbjct: 214 SKG---YGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNS 270
Query: 269 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF---AM 325
E + + TI+ +D+ VT+ D+K F GE+ +++ R FV++ A
Sbjct: 271 GESDPTNTTIFVGAVDQSVTEDDLKSVFGQF-GELVHVKIPA----GKRCGFVQYANRAC 325
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKTP 353
AE A++ LN G LG IR+S ++P
Sbjct: 326 AEQALSVLN--GTQLGGQSIRLSWGRSP 351
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 15/195 (7%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRT++V + ++ + L T F G Q+V R+ G V +VEF +
Sbjct: 160 EDERDRRTIFVQQLAARLRIKDLFTFFEKAGPVKDAQIVKDRVSGRSKGV---GYVEFKN 216
Query: 228 EEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
EE AA+ L G ML P+ ++ ++ NP + ++ +Y N+
Sbjct: 217 EESVAAAIRLTGQMLLGIPIIAQLTEAEKNRQARNPE--ATAGNQHTAPFHRLYVGNVHF 274
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSL 343
+T+ D+ FE GE++ ++L D ++ AFV+FA E A AL +G L
Sbjct: 275 SITEDDLTNVFEPF-GELEFVQLQKDETGRSKGYAFVQFANPEQARDALEKMNGFELAGR 333
Query: 344 PIRVSPSKTPVRPRA 358
IRV P A
Sbjct: 334 AIRVGLGNDKFTPDA 348
>gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 20/175 (11%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSLA 238
+YV D+D V + QL +F G VV R+C D N+ L +A+V F+ A AL
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE-- 101
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE- 297
ML F PV P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 102 --MLNFTPVNGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALYDT 149
Query: 298 -SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 349
S G + ++ + ++ FV++ ESA A+N +G +L + V P
Sbjct: 150 FSAFGNILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGP 204
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 181 VYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 237
+Y+ ++D V + E+L LF G + C++ D N V + + FV F + E+ RA +++
Sbjct: 326 LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAM 385
Query: 238 AGTMLGFYPVRV 249
G M+G P+ V
Sbjct: 386 NGKMVGSKPLYV 397
>gi|340522099|gb|EGR52332.1| predicted protein [Trichoderma reesei QM6a]
Length = 569
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 86/204 (42%), Gaps = 21/204 (10%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ +L F G Q+V RI G V +VEF
Sbjct: 177 EDERDRRTVFVQQLAARLRTRELKEFFEKVGAVNEAQIVKDRISGRSKGV---GYVEFKS 233
Query: 228 EEGARAALSLAGTMLGFYPVRVL-----PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTN 282
E+ AL L G L PV V ++ A P + P S + +Y N
Sbjct: 234 EDSVPLALQLTGQKLLGIPVIVQHTEAEKNRQARNPDSSNAHPNS-----VPFHRLYVGN 288
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVL 340
I VT+ D++ FE GE++ ++L D +R FV+F A A AL +G L
Sbjct: 289 IHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQFRDAGQAREALEKMNGFDL 347
Query: 341 GSLPIRVSPSKTPVRPRAPRPPLH 364
PIRV P + +H
Sbjct: 348 AGRPIRVGLGNDKFTPESTANLMH 371
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 223
N +SNA + V +YV +I VTE+ L +F G++ ++ D N R + FV
Sbjct: 268 NPDSSNAHPNSVPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGRSRGYGFV 327
Query: 224 EFTDEEGARAAL-SLAGTMLGFYPVRV 249
+F D AR AL + G L P+RV
Sbjct: 328 QFRDAGQAREALEKMNGFDLAGRPIRV 354
>gi|322709421|gb|EFZ00997.1| oligouridylate binding protein ,putative [Metarhizium anisopliae
ARSEF 23]
Length = 472
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 23/179 (12%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 233
E +R +YV ++Q+VTE+ L +F T G V + +I D N+ + FVE+ D A
Sbjct: 80 EPNKRALYVGGLEQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFNYGFVEYDDPGAAER 139
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGDI 292
A+S T+ G +R VN + + ++ + S I+ ++ +V DI
Sbjct: 140 AMS---TLNGRREIR----------VNWAYQSNTSNKEDTSSHFHIFVGDLSNEVND-DI 185
Query: 293 KLFFESVCGEVQRLRLLGDYQHS-TR----IAFVEFAMAESAIAALNCSGAVLGSLPIR 346
L S G V R++ D + TR +AF + + AE A+++++ G LGS IR
Sbjct: 186 LLQAFSAFGTVSEARVMWDMKTGRTRGYGFVAFRDRSDAEKALSSMD--GEWLGSRAIR 242
>gi|86170621|ref|XP_966051.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|46362293|emb|CAG25231.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 582
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 84/213 (39%), Gaps = 49/213 (23%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
I VYV ++ +TEE + F +C +++ P ++ +EF EG A
Sbjct: 7 IANVVYVKNLSSDITEENIREKFGSCDEIISITFKNFPGLNQKYCQIEFKTSEGITNASR 66
Query: 237 LAGTMLGFYPVRV-----LPSKTAIAPVNPT------------------------FLPR- 266
L G L P+ V + + T ++ ++ T L +
Sbjct: 67 LNGESLLNVPMVVSVIEPIINNTNLSELSTTECDKNVNSLLDVRNSITNQGVQTLLLQKQ 126
Query: 267 --SEDEREMC----------------SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 308
SE ++ + S+ +Y NI +K + DIK FF++V G +L
Sbjct: 127 VISEQKKRLVDFQNSLNEKNNKFDVFSKIVYMENIPEKYGEEDIKAFFQNV-GNTTSYKL 185
Query: 309 LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLG 341
+ Q AFVEF E A AALN SG +G
Sbjct: 186 QYNEQKKVHTAFVEFKNEEHAKAALNLSGTKVG 218
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
+V + VY+ +I ++ EE + F G ++ + + AFVEF +EE A+AA
Sbjct: 150 DVFSKIVYMENIPEKYGEEDIKAFFQNVGNTTSYKLQYNEQKKVHTAFVEFKNEEHAKAA 209
Query: 235 LSLAGTMLGFYPV 247
L+L+GT +G + +
Sbjct: 210 LNLSGTKVGLHEI 222
>gi|367030019|ref|XP_003664293.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
gi|347011563|gb|AEO59048.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
Length = 787
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 24/180 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 135 CRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 194
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 195 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKAN 243
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
+Y NI+ +VT+ + + F S GEV L D + +R FV F+ +SA A+
Sbjct: 244 YTNVYVKNINLEVTEEEFRELF-SKYGEVTSSTLARDQEGKSRGFGFVNFSTHDSAAKAV 302
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 18/173 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + + +G +A
Sbjct: 65 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALEE 124
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 125 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 172
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
+ G + ++ D +++ FV + E+A A+ + +G +L + V
Sbjct: 173 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYV 224
>gi|313226301|emb|CBY21445.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN-SVLRFAFVEFT 226
+ A+ DE+ +RT+YV ++ + TE L LF G VVD ++ D S + F+ +
Sbjct: 36 SEQAKDDEIFKRTLYVGNLHKNATENVLKALFAVIGNVVDIKMINDAALSTSHYCFITYE 95
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 286
GA+ AL+ + V +P K VN P + I+ ++ ++
Sbjct: 96 THVGAQRALA----AMNGRDVYKMPLK-----VNWATRPDGIKKDTSKDHHIFVGDLAQE 146
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL 333
+T D++ FE G++ R++ D Q S FV F ESA A+
Sbjct: 147 LTTLDLQNEFEKF-GKISEARVVRDAQTNRSKGYGFVAFLKKESAEMAI 194
>gi|156363387|ref|XP_001626026.1| predicted protein [Nematostella vectensis]
gi|156212886|gb|EDO33926.1| predicted protein [Nematostella vectensis]
Length = 468
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 9/181 (4%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGA 231
+E +RTV+ + + + L F GQV D RI D NS A++EFTD+
Sbjct: 114 EEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAV 173
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ L+G L P+ V+ ++ A N ++ + +Y ++ +T+
Sbjct: 174 PLAIGLSGQKLLGAPIMVMLTQ---AEKNRLAAEAERLKQPLGPTRLYVGSLHFNITEAM 230
Query: 292 IKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 348
+K FE G V ++L+ D + S FV+F AE+A A+ +G L P+++
Sbjct: 231 VKAVFEPF-GTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQMNGFELAGRPLKIG 289
Query: 349 P 349
P
Sbjct: 290 P 290
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E E RT++C + + + D++ FF V G+V +R++ D + S IA++EF
Sbjct: 111 ESAEEKDQRTVFCMQLARNIRPRDLEEFFSKV-GQVSDVRIISDRNSRRSKGIAYIEFTD 169
Query: 326 AESAIAALNCSGAVLGSLPIRV 347
+ A+ SG L PI V
Sbjct: 170 KSAVPLAIGLSGQKLLGAPIMV 191
>gi|156064869|ref|XP_001598356.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980]
gi|154691304|gb|EDN91042.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 570
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ ++L F G Q+V R+ G V +VEF +
Sbjct: 171 EDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKN 227
Query: 228 EEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
EE AA+ L G L P+ ++ ++ NP + + ++ +Y NI
Sbjct: 228 EESVPAAIQLTGQRLLGIPIIAQLTEAEKNRQVRNPEAT--TSNPNQIPFHRLYVGNIHF 285
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSL 343
+T+ D++ FE GE++ ++L + Q +R FV+F A AL +G L
Sbjct: 286 SITEADLQNVFEPF-GELEFVQLQKEEQGRSRGYGFVQFRDPNQAREALEKMNGFDLAGR 344
Query: 344 PIRV 347
PIRV
Sbjct: 345 PIRV 348
>gi|115475163|ref|NP_001061178.1| Os08g0192900 [Oryza sativa Japonica Group]
gi|75325377|sp|Q6Z1C0.1|NUCL1_ORYSJ RecName: Full=Nucleolin 1; AltName: Full=Protein NUCLEOLIN LIKE 1
gi|40253662|dbj|BAD05605.1| putative nucleolin [Oryza sativa Japonica Group]
gi|51449869|gb|AAU01907.1| putative nucleolin [Oryza sativa Indica Group]
gi|113623147|dbj|BAF23092.1| Os08g0192900 [Oryza sativa Japonica Group]
gi|125602459|gb|EAZ41784.1| hypothetical protein OsJ_26324 [Oryza sativa Japonica Group]
Length = 572
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLA 238
T+++ ++ + ++Q+ F G+V+ R+ + R F V+F E A+ AL L
Sbjct: 312 TLFMGNLSFNLNQDQVKEFFQEVGEVISVRLATHEDGSSRGFGHVQFASSEEAKKALELH 371
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRS-------EDEREMCSRTIYCTNIDKKVTQGD 291
G L PVR+ +A + P S + + S++I+ D + +
Sbjct: 372 GCDLDGRPVRL-----DLAHERGAYTPHSRNDTGSFQKQNRGSSQSIFVKGFDSSLEESK 426
Query: 292 IKLFFE---SVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIR 346
I+ E + CGE+ R+ + D + S IA+++F S AL SG+ LG +
Sbjct: 427 IRESLEGHFADCGEITRVSVPMDRETGASKGIAYIDFKDQASFSKALELSGSDLGGYNLY 486
Query: 347 VSPSK 351
V +K
Sbjct: 487 VDEAK 491
>gi|408395605|gb|EKJ74783.1| hypothetical protein FPSE_05031 [Fusarium pseudograminearum CS3096]
Length = 749
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 130 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDETGASKGY 189
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE ++A + G +L V V +P K R EM +
Sbjct: 190 GFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 238
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
+Y NI VT+ D + FE G+V L D + +R FV F ESA A+
Sbjct: 239 FTNVYVKNIAADVTEDDFRQLFEKY-GDVTSSSLARDQEGKSRGFGFVNFTTHESAFKAV 297
Query: 334 N 334
+
Sbjct: 298 D 298
>gi|154322639|ref|XP_001560634.1| hypothetical protein BC1G_00662 [Botryotinia fuckeliana B05.10]
gi|347837181|emb|CCD51753.1| hypothetical protein [Botryotinia fuckeliana]
Length = 570
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ ++L F G Q+V R+ G V +VEF +
Sbjct: 171 EDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKN 227
Query: 228 EEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
EE AA+ L G L P+ ++ ++ NP + + ++ +Y NI
Sbjct: 228 EESVPAAIQLTGQRLLGIPIIAQLTEAEKNRQVRNPEAT--TSNPNQIPFHRLYVGNIHF 285
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSL 343
+T+ D++ FE GE++ ++L + Q +R FV+F A AL +G L
Sbjct: 286 SITESDLQNVFEPF-GELEFVQLQKEEQGRSRGYGFVQFRDPNQAREALEKMNGFDLAGR 344
Query: 344 PIRV 347
PIRV
Sbjct: 345 PIRV 348
>gi|408394044|gb|EKJ73300.1| hypothetical protein FPSE_06565 [Fusarium pseudograminearum CS3096]
Length = 568
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 86/203 (42%), Gaps = 17/203 (8%)
Query: 156 GYSQGKRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD 213
G +R N Q +DE RRTV+V + ++ +L F G V + +I D
Sbjct: 153 GRDDDRRETKREEGNPQLTEDERDRRTVFVQQLAARLRTRELKEFFERVGPVNEAQIVKD 212
Query: 214 PNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVL-----PSKTAIAPVNPTFLPR 266
S +VEF +EE AL L G L PV V ++ A P P
Sbjct: 213 RISQRSKGVGYVEFKNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPN 272
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAM 325
S + +Y NI VT+ D++ FE GE++ ++L D +R FV+F
Sbjct: 273 S-----IPFHRLYVGNIHFNVTEQDLQAVFEPF-GELEFVQLQKDENGRSRGYGFVQFRD 326
Query: 326 AESAIAAL-NCSGAVLGSLPIRV 347
A A AL +G L PIRV
Sbjct: 327 AGQAREALEKMNGFDLAGRPIRV 349
>gi|388496342|gb|AFK36237.1| unknown [Medicago truncatula]
Length = 202
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 28/205 (13%)
Query: 151 RRKRNGYSQGKRRMNCRTSNAQQD---EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 207
R +R+ ++ RR + N + + E +RTV+ + + TE + F G+V D
Sbjct: 8 RGERDFENRDGRRFRDKKENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRD 67
Query: 208 CRICGDPNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK-----------T 254
R+ D NS ++EF D A++L+G +L PV V PS+ +
Sbjct: 68 VRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASS 127
Query: 255 AIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ- 313
A V P R +Y N+ +T+ +++ FE G+++ ++L D +
Sbjct: 128 GAAVVGPY---------GAVDRKLYVGNLHFNMTEANLREIFEPF-GQIEVVQLPLDMET 177
Query: 314 -HSTRIAFVEFAMAESAIAALNCSG 337
H FV+FA E A AA + +G
Sbjct: 178 GHCKGFGFVQFAHLEHAKAAQSLNG 202
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVE 322
P ++ ER+ RT++ + K T+ D+ FF S G+V+ +RL+ D + S + ++E
Sbjct: 30 PEADPERD--QRTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIE 86
Query: 323 FAMAESAIAALNCSGAVLGSLPIRVSPSKT 352
F A S A+ SG +L P+ V PS+
Sbjct: 87 FYDAMSVPMAIALSGQLLLGQPVMVKPSEA 116
>gi|224128984|ref|XP_002328861.1| predicted protein [Populus trichocarpa]
gi|222839291|gb|EEE77628.1| predicted protein [Populus trichocarpa]
Length = 950
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
A++++ +++T++VS++ +T EQL LF CG VV+C I +S A++E++ E
Sbjct: 341 ARKEDALKKTLHVSNLSPLLTVEQLKQLFSFCGTVVECTIADSKHS----AYIEYSKPEE 396
Query: 231 ARAALSLAGTMLGFYPVRVLPSKT 254
A AAL+L +G P+ V +K+
Sbjct: 397 ATAALALNNMDVGGRPLNVETAKS 420
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
R ED +T++ +N+ +T +K F S CG V + D +HS A++E++
Sbjct: 342 RKED---ALKKTLHVSNLSPLLTVEQLKQLF-SFCGTVVEC-TIADSKHS---AYIEYSK 393
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT-PVRP 356
E A AAL + +G P+ V +K+ P +P
Sbjct: 394 PEEATAALALNNMDVGGRPLNVETAKSLPQKP 425
>gi|449433175|ref|XP_004134373.1| PREDICTED: uncharacterized protein LOC101203535 [Cucumis sativus]
Length = 936
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 11/94 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
+ ++RT+ VS++ +T EQL LF CG VV+C I + FA++E++ E A AA
Sbjct: 334 DALKRTLQVSNLSPLLTVEQLKQLFSFCGTVVECTITDSKH----FAYIEYSKPEEATAA 389
Query: 235 LSLAGTMLGFYPVRV-----LPSKTAIAPVNPTF 263
L+L +G P+ V LP K A A NP+
Sbjct: 390 LALNNMDVGGRPLNVEMAKSLPQKPAAA--NPSL 421
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
RT+ +N+ +T +K F S CG V + D +H A++E++ E A AAL
Sbjct: 338 RTLQVSNLSPLLTVEQLKQLF-SFCGTVVEC-TITDSKH---FAYIEYSKPEEATAALAL 392
Query: 336 SGAVLGSLPIRVSPSKT-PVRPRAPRPPL 363
+ +G P+ V +K+ P +P A P L
Sbjct: 393 NNMDVGGRPLNVEMAKSLPQKPAAANPSL 421
>gi|330802862|ref|XP_003289431.1| hypothetical protein DICPUDRAFT_11237 [Dictyostelium purpureum]
gi|325080473|gb|EGC34027.1| hypothetical protein DICPUDRAFT_11237 [Dictyostelium purpureum]
Length = 168
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 28/187 (14%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-GDPNSVLRFAFVEFTDEE 229
A +DE+ ++V + +V E+++ T F CG++ + ++ G+P V AFV F E+
Sbjct: 2 AAEDEL---KIFVGQLPSRVNEDEIRTYFEECGEITNVKVLSGNPQRVA--AFVTFATED 56
Query: 230 GARAALSLAGTML-GFYPVRV--LPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 286
G AA++ G G P+R+ SK + PT TI NI
Sbjct: 57 GKNAAIAFNGKDFNGNGPLRINAANSKPSDGEGEPT--------------TIVARNIAFS 102
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI---AFVEFAMAESAIAALNCSGAVLGSL 343
V + +K FF+ CG++ R+ L Y+ S R+ AFV F E+ A+ +G +
Sbjct: 103 VDETLVKEFFQG-CGKITRVS-LPTYEDSGRLKGFAFVSFDSEEAVDKAIALAGTMFEGR 160
Query: 344 PIRVSPS 350
I+V S
Sbjct: 161 EIQVEKS 167
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Query: 160 GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSV 217
G R+N S E T+ +I V E + F CG++ V D +
Sbjct: 73 GPLRINAANSKPSDGEGEPTTIVARNIAFSVDETLVKEFFQGCGKITRVSLPTYEDSGRL 132
Query: 218 LRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS 252
FAFV F EE A++LAGTM ++V S
Sbjct: 133 KGFAFVSFDSEEAVDKAIALAGTMFEGREIQVEKS 167
>gi|358248652|ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycine max]
gi|255644669|gb|ACU22837.1| unknown [Glycine max]
Length = 411
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 10/172 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
YV I TE+ + + F +CG + VDC + A + F E A+ AL+L
Sbjct: 168 AYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRALALD 227
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
G +G +++ P K A F P + E +R IY N+ +T+ +++ FF
Sbjct: 228 GADMGGLFLKIQPYKATRANKASDFAP---EILEGYNR-IYVGNLSWDITEEELRKFFNG 283
Query: 299 VCGEVQRLRLLGDYQHST--RIAFVEFAMAESAIAALNCSGAVLGSLPIRVS 348
E+ LR D + A V+F+ ++S AL VL P+R+S
Sbjct: 284 C--EITSLRFGMDKETGEFRGYAHVDFSDSQSLKTALALDQNVLFGRPVRIS 333
>gi|402084391|gb|EJT79409.1| RNA splicing factor Pad-1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 601
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 79/184 (42%), Gaps = 12/184 (6%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ ++L F G V +I D N +VEF EE
Sbjct: 204 EDERDRRTVFVQQLAARLRTKELHEFFEQAGPVAAAQIVKDRVSNRSKGVGYVEFKSEES 263
Query: 231 ARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
AAL L G L PV V P+ K + + +Y NI +
Sbjct: 264 LPAALQLTGQKLAGIPVIVQPTEAEKNRQVRTTENSNANGAQQNSVLFHRLYVGNIHFSI 323
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF---AMAESAIAALNCSGAVLGSL 343
T+ D++ F GE++ ++L + +R FVE+ A A A+ +N G L
Sbjct: 324 TEPDLRTVF-GPFGELRFVQLQKEDNGRSRGYGFVEYNDPANAREALEKMN--GFDLAGR 380
Query: 344 PIRV 347
PIRV
Sbjct: 381 PIRV 384
Score = 44.3 bits (103), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 223
N + AQQ+ V+ +YV +I +TE L T+F G++ ++ + N R + FV
Sbjct: 298 NSNANGAQQNSVLFHRLYVGNIHFSITEPDLRTVFGPFGELRFVQLQKEDNGRSRGYGFV 357
Query: 224 EFTDEEGARAAL-SLAGTMLGFYPVRV 249
E+ D AR AL + G L P+RV
Sbjct: 358 EYNDPANAREALEKMNGFDLAGRPIRV 384
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFA 324
+EDER+ RT++ + ++ ++ FFE G V +++ D S + +VEF
Sbjct: 203 TEDERDR--RTVFVQQLAARLRTKELHEFFEQ-AGPVAAAQIVKDRVSNRSKGVGYVEFK 259
Query: 325 MAESAIAALNCSGAVLGSLPIRVSPSK 351
ES AAL +G L +P+ V P++
Sbjct: 260 SEESLPAALQLTGQKLAGIPVIVQPTE 286
>gi|242039427|ref|XP_002467108.1| hypothetical protein SORBIDRAFT_01g019710 [Sorghum bicolor]
gi|241920962|gb|EER94106.1| hypothetical protein SORBIDRAFT_01g019710 [Sorghum bicolor]
Length = 664
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 25/196 (12%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSL 237
+T++V ++ + EQ+ F G+VVD R+ D S + VEF E A+ AL
Sbjct: 413 KTIFVGNLAYSIEREQVKEFFEEAGEVVDIRLSTFDDGSFKGYGHVEFATAEAAQKALEF 472
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE----REMCSR---TIYCTNIDKKVTQG 290
G L +R+ +A + P S + R+ R T++ D V +
Sbjct: 473 GGRDLMGRSLRI-----DLAVERGAYTPNSGKDNGSFRKSAQRSGNTVFIKGFDTSVGED 527
Query: 291 DIKLFFES---VCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAVLGSLPI 345
I+ E CG++ R+ + DY S +A+++F +S A +G LG +
Sbjct: 528 QIRSALEEHFRSCGDITRISIPKDYDTGASKGMAYMDFKDPDSLNKAYEMNGTYLGDYSL 587
Query: 346 RVSPSKTPVRPRAPRP 361
V +K PRP
Sbjct: 588 YVDEAK-------PRP 596
>gi|255941952|ref|XP_002561745.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586368|emb|CAP94118.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 562
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 81/187 (43%), Gaps = 21/187 (11%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEG 230
+DE RRT++V + ++ + L T F G V D +I D S +VEF +EE
Sbjct: 167 EDERDRRTIFVQQLAARLRIKDLFTFFEKAGPVKDAQIVKDRVSGRSKGVGYVEFKNEES 226
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--------RTIYCTN 282
AA+ L G ML P+ IA + R E S +Y N
Sbjct: 227 VAAAIRLTGQMLLGIPI--------IAQLTEAEKNRQARNTESTSGHHHTAPFHRLYVGN 278
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVL 340
+ +T+ D+ FE GE++ ++L D S AFV+FA E A AL +G L
Sbjct: 279 VHFSITEEDLTNVFEPF-GELEFVQLQKDETGRSKGYAFVQFANPEQARDALEKMNGFEL 337
Query: 341 GSLPIRV 347
IRV
Sbjct: 338 AGRAIRV 344
>gi|401424247|ref|XP_003876609.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492852|emb|CBZ28130.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 495
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+QDE+ RRT+YVS + + + L L T G V RIC FAFVE EGA
Sbjct: 371 RQDEMKRRTIYVSHLPGLLPQSMLLELLTTAGPVNKVRICAGAGYCTLFAFVEMRTLEGA 430
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPV 259
+ A+ + G L + +RV ++ A+ V
Sbjct: 431 QRAMCMNGLQLMGFAIRVQTARNAVQDV 458
>gi|226469236|emb|CAX70097.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 463
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 10/176 (5%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGARAAL 235
RTV+V + ++ + L F + G++ D R+ D N R A+VEF + E A+ AL
Sbjct: 104 RTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMD-NKTKRSKGIAYVEFREVESAQLAL 162
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPT-FLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L GT L P+++ S V+ T LPR + + + +Y ++ +T+ +K
Sbjct: 163 GLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPSQQNKGPMK-LYIGSLHYNITEEMLKG 221
Query: 295 FFESVCGEVQRLRLLGD--YQHSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRV 347
FE G+++ ++L+ D S FV + ++ A AL+ +G L P++V
Sbjct: 222 IFEPF-GKIEDIKLIKDPATNRSQGYGFVTYVNSDDAKKALDQLNGFELAGRPMKV 276
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 252 SKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD 311
S+T +P P D +RT++ + ++ Q D++ FF SV G+++ +RL+ D
Sbjct: 85 SRTERRQKSPELSPEERD-----ARTVFVWQLSARIRQRDLEDFFTSV-GKIRDVRLIMD 138
Query: 312 --YQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS-----KTPVRPRAPRP 361
+ S IA+VEF ESA AL +G L +PI++ S + P PRP
Sbjct: 139 NKTKRSKGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRP 195
>gi|157105905|ref|XP_001649078.1| fuse-binding protein-interacting repressor siahbp1 [Aedes aegypti]
gi|108879987|gb|EAT44212.1| AAEL004415-PA [Aedes aegypti]
Length = 672
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
VYV I ++ E+ + FL G + + DP + FAFVE+ EGA+ AL +
Sbjct: 188 VYVGSISFELKEDTIRAAFLPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 247
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G MLG ++V + + P + ++E + +R IY +I +T+ DIK FE
Sbjct: 248 NGAMLGGRNIKV--GRPSNMPQAQQVIDEIQEEAKNYNR-IYIASIHPDLTEEDIKSVFE 304
Query: 298 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 353
+ V G H+ + AF+E+ +SAI A+ LG +RV S TP
Sbjct: 305 AFGPIVTCKMSQGSAAHTHKGYAFIEYQTNQSAIEAIASMNLFDLGGQLLRVGRSITP 362
>gi|195037090|ref|XP_001989998.1| GH19101 [Drosophila grimshawi]
gi|193894194|gb|EDV93060.1| GH19101 [Drosophila grimshawi]
Length = 476
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 19/189 (10%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+EE L LF G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDGTVSEELLVALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 292
AL+ RV K VN P + + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNK-------RVFLDKE--IKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETL 111
Query: 293 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRV 347
+ F GE+ R++ D Q S AFV F A AE+AI A+N G +GS IR
Sbjct: 112 REAFAPF-GEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRT 168
Query: 348 SPSKTPVRP 356
+ S + P
Sbjct: 169 NWSTRKLPP 177
>gi|313240198|emb|CBY32547.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 25/178 (14%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++VTE LA LF+ G VV+C + D + + FVEF E+ A A+ +
Sbjct: 12 TVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADYAIKI 71
Query: 238 AGTMLGF-YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ F PVRV +K + S + ++ N+D ++ D KL +
Sbjct: 72 LNMIKLFGKPVRV--NKAS-----------SHQKNLDVGANLFIGNLDPEI---DEKLLY 115
Query: 297 ES-----VCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 348
++ V + ++ D +S AF+ ++ E+A AAL +G L + PI +S
Sbjct: 116 DTFSAFGVILQTPKIMRDPDTGNSKGFAFINYSSFEAADAALEAMNGQYLCNRPITIS 173
>gi|427798071|gb|JAA64487.1| Putative splicing factor arginine/serine-rich, partial
[Rhipicephalus pulchellus]
Length = 381
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 36/65 (55%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
E IRRTVYV ++D T EQL F G+V R+ G + RFAFVEFT++ A
Sbjct: 71 EEIRRTVYVGNLDSSATTEQLLKFFSQMGEVKYVRMAGGESQPTRFAFVEFTEQSSVGRA 130
Query: 235 LSLAG 239
L G
Sbjct: 131 LQFNG 135
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 331
E RT+Y N+D T + FF S GEV+ +R+ G TR AFVEF S
Sbjct: 71 EEIRRTVYVGNLDSSATTEQLLKFF-SQMGEVKYVRMAGGESQPTRFAFVEFTEQSSVGR 129
Query: 332 ALNCSG 337
AL +G
Sbjct: 130 ALQFNG 135
>gi|46121573|ref|XP_385341.1| hypothetical protein FG05165.1 [Gibberella zeae PH-1]
Length = 568
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 86/203 (42%), Gaps = 17/203 (8%)
Query: 156 GYSQGKRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD 213
G +R N Q +DE RRTV+V + ++ +L F G V + +I D
Sbjct: 153 GRDDDRRETKREEGNPQLTEDERDRRTVFVQQLAARLRTRELKEFFERVGPVNEAQIVKD 212
Query: 214 PNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVL-----PSKTAIAPVNPTFLPR 266
S +VEF +EE AL L G L PV V ++ A P P
Sbjct: 213 RISQRSKGVGYVEFKNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPN 272
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAM 325
S + +Y NI VT+ D++ FE GE++ ++L D +R FV+F
Sbjct: 273 S-----IPFHRLYVGNIHFNVTEQDLQAVFEPF-GELEFVQLQKDENGRSRGYGFVQFRD 326
Query: 326 AESAIAAL-NCSGAVLGSLPIRV 347
A A AL +G L PIRV
Sbjct: 327 AGQAREALEKMNGFDLAGRPIRV 349
>gi|10086463|gb|AAG12523.1|AC015446_4 Similar to Polyadenylate-Binding Proteins 2 and 5 [Arabidopsis
thaliana]
Length = 338
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 15/159 (9%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 236
R V+V ++D+ + +QL +F G+V+ C++ D + V + + FV+F + A +
Sbjct: 101 RGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACN 160
Query: 237 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
GT++ + V P F+ R + ++ +Y N+ + T D+K
Sbjct: 161 FHNGTLIRNQHIHVCP-----------FVSRGQWDKSRVFTNVYVKNLVETATDADLKRL 209
Query: 296 FESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL 333
F GE+ ++ D + S R FV F AE+A+ A+
Sbjct: 210 FGEF-GEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAI 247
>gi|125560429|gb|EAZ05877.1| hypothetical protein OsI_28114 [Oryza sativa Indica Group]
Length = 572
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 18/185 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLA 238
T+++ ++ + ++Q+ F G+V+ R+ + R F V+F E A+ AL L
Sbjct: 312 TLFMGNLSFNLNQDQVKEFFQEVGEVISVRLATHEDGSSRGFGHVQFASSEEAKKALELH 371
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRS-------EDEREMCSRTIYCTNIDKKVTQGD 291
G L PVR+ +A + P S + + S++I+ D + +
Sbjct: 372 GCDLDGRPVRL-----DLAHERGAYTPHSRNDTGSFQKQNRGSSQSIFVKGFDSSLEESK 426
Query: 292 IKLFFE---SVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIR 346
I+ E + CGE+ R+ + D + S IA+++F S AL SG+ LG +
Sbjct: 427 IRESLEGHFADCGEITRVSVPMDRETGASKGIAYIDFKDQASFSKALELSGSDLGGYNLY 486
Query: 347 VSPSK 351
V +K
Sbjct: 487 VDEAK 491
>gi|91805911|gb|ABE65684.1| polyadenylate-binding protein [Arabidopsis thaliana]
Length = 267
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 236
R V+V ++D+ + +QL +F G+V+ C++ D + V + + FV+F + A +
Sbjct: 30 RGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACN 89
Query: 237 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
GT++ + V P F+ R + ++ +Y N+ + T D+K
Sbjct: 90 FHNGTLIRNQHIHVCP-----------FVSRGQWDKSRVFTNVYVKNLVETATDADLKRL 138
Query: 296 FESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
F GE+ ++ D + S R FV F AE+A+ A+ +G V+ + V
Sbjct: 139 FGEF-GEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMNGVVVDEKELHV 191
>gi|340502094|gb|EGR28811.1| splicing factor subunit 4, putative [Ichthyophthirius multifiliis]
Length = 267
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T+YV IDQ+VT+E L LF CG VV+ + D + + FVEF EE A ++ +
Sbjct: 13 TIYVGGIDQKVTQEVLWELFSQCGIVVNVHLPKDKITGEHQGYGFVEFKSEEDADYSIKI 72
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDER-EMCSRTIYCTNIDKKVTQGDIKL 294
++ Y P++V + S+D+R + I+ N+D+ +T+ +
Sbjct: 73 M-HLVKLYGKPIKVNKA--------------SQDKRTQEVGANIFIGNLDQSITEQQLHD 117
Query: 295 FFESVCGEVQRLRLL--GDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRV 347
F S G + R++ D S AFV + E+A AA+N +G GS I V
Sbjct: 118 TF-SQFGLIISRRIVRDPDNDESKGYAFVSYDNFEAADAAINTMNGQFFGSKKINV 172
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 166 CRTSNAQQDEVIRRT---VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRF 220
+ + A QD+ + +++ ++DQ +TE+QL F G ++ RI DP++ +
Sbjct: 83 IKVNKASQDKRTQEVGANIFIGNLDQSITEQQLHDTFSQFGLIISRRIVRDPDNDESKGY 142
Query: 221 AFVEFTDEEGARAAL-SLAGTMLG 243
AFV + + E A AA+ ++ G G
Sbjct: 143 AFVSYDNFEAADAAINTMNGQFFG 166
>gi|313237737|emb|CBY12875.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 25/178 (14%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++VTE LA LF+ G VV+C + D + + FVEF E+ A A+ +
Sbjct: 12 TVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADYAIKI 71
Query: 238 AGTMLGF-YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ F PVRV +K + S + ++ N+D ++ D KL +
Sbjct: 72 LNMIKLFGKPVRV--NKAS-----------SHQKNLDVGANLFIGNLDPEI---DEKLLY 115
Query: 297 ES-----VCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 348
++ V + ++ D +S AF+ ++ E+A AAL +G L + PI +S
Sbjct: 116 DTFSAFGVILQTPKIMRDPDTGNSKGFAFINYSSFEAADAALEAMNGQYLCNRPITIS 173
>gi|169768824|ref|XP_001818882.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus oryzae RIB40]
gi|238498168|ref|XP_002380319.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|83766740|dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693593|gb|EED49938.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|391874569|gb|EIT83434.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 477
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV----LRFAFVEFTDEEG 230
E +R +YV +DQ+VTE+ L +F T G VV +I D N + FVEF D
Sbjct: 86 EPNKRALYVGGLDQRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGA 145
Query: 231 A-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVT 288
A RA +L G + +R VN + S ++ + + I+ ++ +V
Sbjct: 146 AERAMQTLNGRRIHQSEIR----------VNWAYQSNSTNKEDTSNHFHIFVGDLSNEVN 195
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSL 343
++ F S G V R++ D + S FV F A A+ A+ +++ G LGS
Sbjct: 196 DEILQQAF-SAFGSVSEARVMWDMKTGRSRGYGFVAFRDRADADKALGSMD--GEWLGSR 252
Query: 344 PIR 346
IR
Sbjct: 253 AIR 255
>gi|449454219|ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 562
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 12/200 (6%)
Query: 160 GKRRMNCRTSNAQQD---EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS 216
G+R + + A+ + E +RTV+ I + TE + F G+V D R+ D NS
Sbjct: 156 GRRYKDKKDETAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRNS 215
Query: 217 VLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC 274
+VEF D A++L+G +L PV V PS+ V T
Sbjct: 216 RRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGP 275
Query: 275 ----SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESA 329
+R +Y N+ +T+ +++ F G V+ +++ + + H F++F E A
Sbjct: 276 YSGGARRLYVGNLHPNITEDNLRQVF-GAFGTVELVQMPVDESGHCKGFGFIQFTRLEDA 334
Query: 330 IAALNCSGAV-LGSLPIRVS 348
AL+ +G + + I+VS
Sbjct: 335 RNALSLNGQLEIAGRTIKVS 354
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 260 NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTR 317
+ T P ++ ER+ RT++ I K T+ D+ FF S G+V+ +RL+ D + S
Sbjct: 164 DETAEPEADPERDQ--RTVFAYQISLKATERDVYEFF-SRAGKVRDVRLIMDRNSRRSKG 220
Query: 318 IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
+ +VEF A S A+ SG +L S P+ V PS+
Sbjct: 221 VGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSE 254
>gi|389593175|ref|XP_003721841.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|321438343|emb|CBZ12095.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 495
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+QDE+ RRT+YVS + + + L L T G V RIC FAFVE EGA
Sbjct: 371 RQDEMKRRTIYVSHLPGLLPQSMLLELLTTAGPVNKVRICAGAGYCTLFAFVEMRTLEGA 430
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPV 259
+ A+ + G L + +RV ++ A+ V
Sbjct: 431 QRAMCMNGLQLMGFAIRVQTARNAVQDV 458
>gi|356525215|ref|XP_003531222.1| PREDICTED: uncharacterized protein LOC100790138 [Glycine max]
Length = 975
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
A +D+ +++T+ VS++ +T EQL LF CG VV+C I + FA++E++ E
Sbjct: 337 ASKDDALKKTLQVSNLSPLLTVEQLKQLFGFCGTVVECTITDSKH----FAYIEYSKPEE 392
Query: 231 ARAALSLAGTMLGFYPVRVLPSKT 254
A AAL+L +G P+ V +K+
Sbjct: 393 ATAALALNNIDVGGRPLNVEMAKS 416
>gi|342884065|gb|EGU84408.1| hypothetical protein FOXB_05073 [Fusarium oxysporum Fo5176]
Length = 566
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 81/184 (44%), Gaps = 15/184 (8%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D S +VEF +EE
Sbjct: 172 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQRSKGVGYVEFKNEES 231
Query: 231 ARAALSLAGTMLGFYPVRVL-----PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
AL L G L PV V ++ A P P S + +Y NI
Sbjct: 232 VTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPNS-----IPFHRLYVGNIHF 286
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSL 343
VT+ D++ FE GE++ ++L D +R FV+F A A AL +G L
Sbjct: 287 NVTEQDLQAVFEPF-GELEFVQLQKDENGRSRGYGFVQFRDAGQAREALEKMNGFDLAGR 345
Query: 344 PIRV 347
PIRV
Sbjct: 346 PIRV 349
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFA 324
+EDER+ RT++ + ++ ++K FFE V G V +++ D Q S + +VEF
Sbjct: 171 TEDERDR--RTVFVQQLAARLRTRELKEFFEKV-GPVNEAQIVKDRISQRSKGVGYVEFK 227
Query: 325 MAESAIAALNCSGAVLGSLPIRV 347
ES AL +G L +P+ V
Sbjct: 228 NEESVTQALQLTGQKLLGIPVIV 250
>gi|225458678|ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147773643|emb|CAN76464.1| hypothetical protein VITISV_017035 [Vitis vinifera]
Length = 640
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 15/164 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D +T+ QL LF+ GQV+ R+C D ++ L + +V +++ + A AL L
Sbjct: 19 SLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDL 78
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L F P+ P + + +P+ R+ + I+ N+DK + + F
Sbjct: 79 ----LNFTPLNGKPIRIMYSHRDPSI-------RKSGTANIFIKNLDKSIDNKALHDTF- 126
Query: 298 SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVL 340
S G + ++ D S FV+F ESA A++ +L
Sbjct: 127 SAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLNGML 170
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D IR++ +++ ++D+ + + L F G ++ C+I DP+ + +
Sbjct: 89 IRIMYSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGY 148
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---R 276
FV+F +EE A+ A+ L G ++ V V FL + E E +
Sbjct: 149 GFVQFDNEESAQNAIDKLNGMLINDKQVYV-----------GQFLRKQERETALNKTKFN 197
Query: 277 TIYCTNIDKKVTQGDIKLFF 296
+Y N+ + T+ D+K F
Sbjct: 198 NVYVKNLSESTTEEDLKNIF 217
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D + +++L LF G + C++ DP+ + R + FV F T EE +RA +
Sbjct: 302 LYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMN 361
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 362 GKMVVSKPLYV 372
>gi|198476543|ref|XP_001357388.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
gi|198137744|gb|EAL34457.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 13/177 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALS 236
RTV+ + Q+V L F + G+V D R+ C A++EF D E AL
Sbjct: 267 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALALG 326
Query: 237 LAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L+G L P+ V + K + P F P+S + +Y ++ +T+ ++
Sbjct: 327 LSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKS----HVGPMRLYVGSLHFDITEEMLR 382
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
FE G++ ++L+ D + S F+ + AE A AL +G L P++V
Sbjct: 383 GIFEPF-GKIDAIQLIMDTETNRSKGYGFITYHNAEDAKKALEQLNGFELAGRPMKV 438
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 261 PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHSTRI 318
PT L S +ER+ +RT++C + ++V D++ FF SV G+V+ +RL+ + I
Sbjct: 256 PTEL--SPEERD--ARTVFCIQLSQRVRARDLEEFFSSV-GKVRDVRLITCNKTKRFKGI 310
Query: 319 AFVEFAMAESAIAALNCSGAVLGSLPIRV 347
A++EF ES AL SG L +PI V
Sbjct: 311 AYIEFEDPESVALALGLSGQRLLGVPIMV 339
>gi|169771151|ref|XP_001820045.1| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
oryzae RIB40]
gi|317144326|ref|XP_003189588.1| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
oryzae RIB40]
gi|121923334|sp|Q2UK72.1|PABP_ASPOR RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|83767904|dbj|BAE58043.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391872693|gb|EIT81794.1| polyadenylate-binding protein [Aspergillus oryzae 3.042]
Length = 765
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 16/177 (9%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 120 CRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGY 179
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 278
FV + E A A+ ML L K + + R EM + +
Sbjct: 180 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNV 232
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 334
Y NID+ VT+ + + FE GE+ L D + +R FV F+ ESA AA++
Sbjct: 233 YIKNIDQDVTEEEFRELFEKF-GEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVD 288
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 50 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 109
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 110 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDSAIDNKALHDTF 157
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 158 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGML 201
>gi|336389833|gb|EGO30976.1| hypothetical protein SERLADRAFT_455426 [Serpula lacrymans var.
lacrymans S7.9]
Length = 439
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 96/234 (41%), Gaps = 39/234 (16%)
Query: 163 RMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR- 219
R+N Q +D V+V D+ +V +E L F G + D R+ D NS
Sbjct: 90 RVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSAFGTMSDARVMWDMNSGKSR 149
Query: 220 -FAFVEFTDEEGARAAL-SLAGTMLGFYPVRV-----------------LPSKT--AIAP 258
+ F+ F D+ A A+ ++ G LG +RV P T A AP
Sbjct: 150 GYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSVAVASPPRPGATGGAPAP 209
Query: 259 VNPTFLPRSED----EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQH 314
+N P S D + + T+Y N+ TQ D+ F+S+ G + +R+ D
Sbjct: 210 INFQGGPLSYDSVVQQTPSYNSTVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQAD--- 265
Query: 315 STRIAFVEFAMAE-SAIAALNCSGAVLGSLPIRVSPSK-----TPVRPRAPRPP 362
AFV+ E +A+A + G ++ PI+ S K T +P P P
Sbjct: 266 -RGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTTAQPGGPLSP 318
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 77/194 (39%), Gaps = 23/194 (11%)
Query: 164 MNCRTSNAQQDEVIRRT-VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLR 219
MN E RR +YV ++ +VTE L +F G V +I D N L
Sbjct: 1 MNSMGGMGGPAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLN 60
Query: 220 FAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTI 278
+ FVE+ D A AL +L G + +R VN + + E +
Sbjct: 61 YGFVEYMDMRAAETALQTLNGRKIFDTEIR----------VNWAYQGQQNKEDTTGHYHV 110
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAAL 333
+ ++ +V + F S G + R++ D +AF + AE AIA +
Sbjct: 111 FVGDLSPEVNDEILGKAF-SAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 169
Query: 334 NCSGAVLGSLPIRV 347
N G LGS IRV
Sbjct: 170 N--GEWLGSRAIRV 181
>gi|378726298|gb|EHY52757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 481
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 25/185 (13%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-----FAFVEFTDEE 229
E +R +YV +D +VTE+ L +F T G VV +I D N+ + FVE+ D
Sbjct: 77 EPNKRALYVGGLDPRVTEDVLKQIFETTGHVVSVKIIPDKNAQFSSKGFNYGFVEYDDPG 136
Query: 230 GA-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKV 287
A RA +L G + +R VN + S ++ + + I+ ++ +V
Sbjct: 137 AAERAMTTLNGRRVHQAEIR----------VNWAYQSNSTNKEDTSNHFHIFVGDLSNEV 186
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGS 342
++ L S G V R++ D + +AF E A AE A+A+++ G LGS
Sbjct: 187 ND-EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALASMD--GEWLGS 243
Query: 343 LPIRV 347
IRV
Sbjct: 244 RAIRV 248
>gi|302915553|ref|XP_003051587.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
gi|256732526|gb|EEU45874.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 82/189 (43%), Gaps = 15/189 (7%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEF 225
T +DE RRTV+V + ++ +L F G V + +I D S +VEF
Sbjct: 167 TPQLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQRSKGVGYVEF 226
Query: 226 TDEEGARAALSLAGTMLGFYPVRVL-----PSKTAIAPVNPTFLPRSEDEREMCSRTIYC 280
+EE AL L G L PV V ++ A P P S + +Y
Sbjct: 227 KNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPNS-----IPFHRLYV 281
Query: 281 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGA 338
NI VT+ D++ FE GE++ ++L D +R FV+F A A AL +G
Sbjct: 282 GNIHFNVTEQDLQAVFEPF-GELEFVQLQKDENGRSRGYGFVQFRDAGQAREALEKMNGF 340
Query: 339 VLGSLPIRV 347
L PIRV
Sbjct: 341 DLAGRPIRV 349
>gi|389744282|gb|EIM85465.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 564
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 20/211 (9%)
Query: 135 IMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNA-------QQDEVIRRTVYVSDID 187
+ DGTA TNG +RK + ++ +A DE + T++V +
Sbjct: 254 VEMADGTAKTNG----KRKAEAEAPAPKKQKLTNGDAVSAPVPASNDEAVT-TIFVGRLS 308
Query: 188 QQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSLAGTMLGFY 245
V + L + F CG+VV R+ D N+ F +VEFT + AAL L G +
Sbjct: 309 WNVDNDWLKSEFEECGEVVSARVQMDRNTGKSRGFGYVEFTSPDAVEAALKLTGKEIDGR 368
Query: 246 PVRVLPSKTAIA--PVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 303
P+ V S T ++ V + D++ S T++ N+ ++ + F S G+V
Sbjct: 369 PINVDKS-TGVSKDKVRDSRAKAFGDQKSEPSSTLFVGNLSFSASEDVLWEAFASY-GDV 426
Query: 304 QRLRLLGDYQ--HSTRIAFVEFAMAESAIAA 332
+ +R+ D + A+V+F ESA A
Sbjct: 427 KGVRMPTDRETGQPKGFAYVDFTDIESAKKA 457
>gi|356510930|ref|XP_003524186.1| PREDICTED: uncharacterized protein LOC100796921 [Glycine max]
Length = 969
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
A +D+ +++T+ VS++ +T EQL LF CG VV+C I + FA++E++ E
Sbjct: 331 ASKDDALKKTLQVSNLSPLLTVEQLKQLFGFCGTVVECAITDSKH----FAYIEYSKPEE 386
Query: 231 ARAALSLAGTMLGFYPVRVLPSKT 254
A AAL+L +G P+ V +K+
Sbjct: 387 ATAALALNNIDVGGRPLNVEMAKS 410
>gi|297827151|ref|XP_002881458.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
gi|297327297|gb|EFH57717.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
Length = 609
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGAR-AALSLA 238
VY+ ++D V E+ L F G++V I D N + + +AFV F E AR AA ++
Sbjct: 203 VYMKNLDADVNEDLLREKFSEFGKIVSLAIAKDENGLCKGYAFVNFDKPEDARWAAETMN 262
Query: 239 GTMLG---FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--IYCTNIDKKVTQGDIK 293
GT G Y R + F + E E+ M ++ IY NI+ VT+ +++
Sbjct: 263 GTRFGSKCLYVGRAQKKAEREQLLREQFKEKHE-EQMMKAKVSNIYVKNINVGVTEEELR 321
Query: 294 LFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNC-SGAVLGSLPIRVSPSK 351
F S CG + +L+ D + ++ FV F+ E AI A+ G + P+ V+ ++
Sbjct: 322 KHF-SQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGKMFHGKPLYVATAQ 380
>gi|91095037|ref|XP_975975.1| PREDICTED: similar to poly A binding protein isoform 4 [Tribolium
castaneum]
gi|270014772|gb|EFA11220.1| hypothetical protein TcasGA2_TC005185 [Tribolium castaneum]
Length = 607
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D N + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQDENGTSKGY 141
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIEKVNGML-------LNGKKVYVG---RFIPRKEREKELGEKAKLF 191
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLG-DYQHSTRIAFVEF---AMAESAIA 331
+Y N + +T+ ++ FE G++ +++ D S FV F AE+A+
Sbjct: 192 TNVYVKNFGEDLTEEQLRTMFEK-YGKITSYKIMSKDDGKSKGFGFVAFESPEAAETAVE 250
Query: 332 ALNCSGAVLGSLPIRV 347
ALN + G P+ V
Sbjct: 251 ALNGKEIIDGK-PLYV 265
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 21/156 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F T G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHTDITEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ ++ P+R++ S+ R R+ ++ N+D+ + D K +
Sbjct: 72 MNFDLIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDRSI---DNKAMY 116
Query: 297 E--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 329
+ S G + ++ D +++ FV F E+A
Sbjct: 117 DTFSAFGNILSCKVAQDENGTSKGYGFVHFETEEAA 152
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 19/189 (10%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 292
AL+ RV K VN P ++ + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNK-------RVFLEKE--IKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETL 111
Query: 293 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRV 347
+ F GE+ R++ D Q S AFV F A AE+AI A+N G +GS IR
Sbjct: 112 REAFAPF-GEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRT 168
Query: 348 SPSKTPVRP 356
+ S + P
Sbjct: 169 NWSTRKLPP 177
>gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 78/164 (47%), Gaps = 15/164 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D +T+ QL LF+ GQV+ R+C D ++ L + +V +++ + A AL L
Sbjct: 19 SLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDL 78
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L F P+ P + + +P+ R+ + I+ N+DK + + F
Sbjct: 79 ----LNFTPLNGKPIRIMYSHRDPSI-------RKSGTANIFIKNLDKSIDNKALHDTF- 126
Query: 298 SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVL 340
S G + ++ D S FV+F ESA A++ +L
Sbjct: 127 SAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLNGML 170
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D IR++ +++ ++D+ + + L F G ++ C+I DP+ + +
Sbjct: 89 IRIMYSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGY 148
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---R 276
FV+F +EE A+ A+ L G ++ V V FL + E E +
Sbjct: 149 GFVQFDNEESAQNAIDKLNGMLINDKQVYV-----------GQFLRKQERETALNKTKFN 197
Query: 277 TIYCTNIDKKVTQGDIKLFF 296
+Y N+ + T+ D+K F
Sbjct: 198 NVYVKNLSESTTEEDLKNIF 217
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D + +++L LF G + C++ DP+ + R + FV F T EE +RA +
Sbjct: 302 LYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMN 361
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 362 GKMVVSKPLYV 372
>gi|256082940|ref|XP_002577709.1| splicing factor [Schistosoma mansoni]
gi|360043602|emb|CCD81148.1| putative splicing factor [Schistosoma mansoni]
Length = 463
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 86/176 (48%), Gaps = 10/176 (5%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGARAAL 235
RTV+V + ++ + L F + G++ D R+ D N R A+VEF + E A+ AL
Sbjct: 104 RTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMD-NKTKRSKGIAYVEFREVESAQLAL 162
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPT-FLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L GT L P+++ S V+ T LPR + + +Y ++ +T+ +K
Sbjct: 163 GLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPSQQNRGPMK-LYIGSLHYNITEEMLKG 221
Query: 295 FFESVCGEVQRLRLLGD--YQHSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRV 347
FE G+++ ++L+ D S FV + ++ A AL+ +G L P++V
Sbjct: 222 IFEPF-GKIEDIKLIKDPTTNRSQGYGFVTYVNSDDAKKALDQLNGFELAGRPMKV 276
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 13/118 (11%)
Query: 251 PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLG 310
PS+T +P P D +RT++ + ++ Q D++ FF SV G+++ +RL+
Sbjct: 84 PSRTERRQKSPELSPEERD-----ARTVFVWQLSARIRQRDLEDFFTSV-GKIRDVRLIM 137
Query: 311 D--YQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS-----KTPVRPRAPRP 361
D + S IA+VEF ESA AL +G L +PI++ S + P PRP
Sbjct: 138 DNKTKRSKGIAYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRP 195
>gi|146090675|ref|XP_001466305.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398017412|ref|XP_003861893.1| hypothetical protein, conserved [Leishmania donovani]
gi|134070667|emb|CAM69016.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322500121|emb|CBZ35196.1| hypothetical protein, conserved [Leishmania donovani]
Length = 495
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+QDE+ RRT+YVS + + + L L T G V RIC FAFVE EGA
Sbjct: 371 RQDEMKRRTIYVSHLPGLLPQSMLLELLTTAGPVNKVRICAGAGYCTLFAFVEMRTLEGA 430
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPV 259
+ A+ + G L + +RV ++ A+ V
Sbjct: 431 QRAMCMNGLQLMGFAIRVQTARNAVQDV 458
>gi|326480772|gb|EGE04782.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton equinum CBS 127.97]
Length = 507
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 231
E +R +YV +D +VTE+ L +F T G V +I D N L + F+E+ D A
Sbjct: 98 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFQSKGLNYGFIEYDDPGAA 157
Query: 232 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 289
RA +L G + +R VN + + + + S I+ ++ +V
Sbjct: 158 ERAMQTLNGRRVHQSEIR----------VNWAYQSNTASKEDTSSHFHIFVGDLSNEVND 207
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 344
++ L S CG V R++ D + +AF E A AE A+++++ G LGS
Sbjct: 208 -EVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMD--GEWLGSRA 264
Query: 345 IR 346
IR
Sbjct: 265 IR 266
>gi|217074578|gb|ACJ85649.1| unknown [Medicago truncatula]
gi|388499396|gb|AFK37764.1| unknown [Medicago truncatula]
Length = 365
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 85/194 (43%), Gaps = 28/194 (14%)
Query: 162 RRMNCRTSNAQQD---EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL 218
RR + N + + E +RTV+ + + TE + F G+V D R+ D NS
Sbjct: 182 RRFRDKKENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 241
Query: 219 R--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK-----------TAIAPVNPTFLP 265
++EF D A++L+G +L PV V PS+ + A V P
Sbjct: 242 SKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAVVGPYG-- 299
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
R +Y N+ +T+ +++ FE G+++ ++L D + H FV+F
Sbjct: 300 -------AVDRKLYVGNLHFNMTEANLREIFEPF-GQIEVVQLPLDMETGHCKGFGFVQF 351
Query: 324 AMAESAIAALNCSG 337
A E A AA + +G
Sbjct: 352 AHLEHAKAAQSLNG 365
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVE 322
P ++ ER+ RT++ + K T+ D+ FF S G+V+ +RL+ D + S + ++E
Sbjct: 193 PEADPERDQ--RTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIE 249
Query: 323 FAMAESAIAALNCSGAVLGSLPIRVSPSKT 352
F A S A+ SG +L P+ V PS+
Sbjct: 250 FYDAMSVPMAIALSGQLLLGQPVMVKPSEA 279
>gi|154338582|ref|XP_001565513.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062565|emb|CAM39007.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 552
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 22/182 (12%)
Query: 176 VIRRTVYVSD--IDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEF---TDE 228
V R +V+V D +D EE + LF + VV ++C D L + +V F D
Sbjct: 5 VQRTSVFVGDLPVDLPRPEEAINNLFSSIAPVVSVKVCRDIATQRSLGYGYVNFQTTADA 64
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
E AL+ G G Y +RV+ F R +R+ + I+ +D V+
Sbjct: 65 EKVIDALNFTGIAPGRY-IRVM------------FAIRDPLQRKSGANNIFVKKLDAAVS 111
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
++ F S CG V ++ D + HS FV+F A+ A AAL+ +GA +G + V
Sbjct: 112 AKALQAAF-SRCGRVLSCKVALDSEGHSKGYGFVQFETADGAKAALDMNGAKVGDSEVEV 170
Query: 348 SP 349
+P
Sbjct: 171 AP 172
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL 235
R +YV + +T+++L +F G++ C I + N LR FAFV F D++ A AA+
Sbjct: 289 RNLYVKHLPDDITDDKLREIFAPFGKITSCAIMRESNGSLRGFAFVCFEDKQHATAAM 346
>gi|215820610|ref|NP_001135964.1| RNA binding motif protein 39 [Nasonia vitripennis]
Length = 516
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 13/207 (6%)
Query: 149 TTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 208
T R R + +G + R+ +E RT++ + Q++ L F + G+V D
Sbjct: 127 TLSRSRQPFIKGASPLTNRSDELTPEERDARTIFCMQLSQRIRARDLEEFFSSVGKVQDV 186
Query: 209 RI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTF 263
R+ C A+VEF D E AL L+G L P+ V + K + P
Sbjct: 187 RLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNL 246
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFV 321
+P+ + +Y ++ +T+ +K FE G+++ ++L+ D + S F+
Sbjct: 247 MPKG----QTGPMRLYVGSLLFNITEEMLKGIFEPF-GKIENIQLIMDPETGRSKGYGFL 301
Query: 322 EFAMAESAIAAL-NCSGAVLGSLPIRV 347
F A+ A AL +G L P++V
Sbjct: 302 TFRNADDAKKALEQLNGFELAGRPMKV 328
>gi|238486326|ref|XP_002374401.1| polyadenylate-binding protein [Aspergillus flavus NRRL3357]
gi|220699280|gb|EED55619.1| polyadenylate-binding protein [Aspergillus flavus NRRL3357]
Length = 713
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 16/177 (9%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 120 CRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGY 179
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 278
FV + E A A+ ML L K + + R EM + +
Sbjct: 180 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNV 232
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 334
Y NID+ VT+ + + FE GE+ L D + +R FV F+ ESA AA++
Sbjct: 233 YIKNIDQDVTEEEFRELFEKF-GEITSATLSRDQEGKSRGFGFVNFSTHESAQAAVD 288
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 50 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 109
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 110 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDSAIDNKALHDTF 157
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 158 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGML 201
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 19/110 (17%)
Query: 132 NNFIMHTDGTANTN-----GHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDI 186
NN I H +G + GH +++ R + M +N VY+ +I
Sbjct: 191 NNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFE---EMKANFTN----------VYIKNI 237
Query: 187 DQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL 235
DQ VTEE+ LF G++ + D R F FV F+ E A+AA+
Sbjct: 238 DQDVTEEEFRELFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAV 287
>gi|401424605|ref|XP_003876788.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493031|emb|CBZ28316.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 423
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 92/229 (40%), Gaps = 30/229 (13%)
Query: 141 TANTNGH-TTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRT----------VYVSDIDQQ 189
T GH TTT +G S GK ++ ++RR+ V +S I
Sbjct: 89 TEKPPGHATTTAADADGDSNGKTVATAASAEPGAALLMRRSADAEKTSKNKVVISSIYPH 148
Query: 190 VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRV 249
T QL +F CG + D + AFV +T EE AL L GTM+ PV V
Sbjct: 149 TTRAQLREVFSPCGAICDFHLI----PTRHMAFVGYTTEEAYEKALKLDGTMVNGNPVAV 204
Query: 250 LPSKT---AIAPVNPTFLPRSEDE--------REMCSRTIYCTNIDKKVTQGDIKLFFES 298
P A AP + R +E R + + VT+ ++ FF
Sbjct: 205 RPCPPRDDAPAPASRRDAMRRGNEGTTTSAPNRRQLDVRVVVHGVPSDVTKEALRAFFSP 264
Query: 299 VCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
CG + + + + +AFV F AE+A A++ SG +L +++
Sbjct: 265 DCGPLTDVFI----KPEIGVAFVAFTSAENAKRAISKSGEMLMGTRVKI 309
>gi|259648115|dbj|BAI40365.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D VTE L TLF G V C+I +P + +AF+EFT A
Sbjct: 3 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND-PYAFLEFTCHTAAVT 61
Query: 234 ALSLAGTMLGFYPVRVLPSKTAI-APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL+ + VL + + +P P+++ I+ ++ ++ +
Sbjct: 62 ALAAMNKRV------VLDKEMKVNWATSPGNQPKTDTSNH---HHIFVGDLSPEIETNIL 112
Query: 293 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRV 347
+ F GE+ R++ D Q S AFV F A AE+AI A+N G LGS IR
Sbjct: 113 REAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN--GQWLGSRSIRT 169
Query: 348 SPS--KTPVR 355
+ S K P +
Sbjct: 170 NWSTRKPPAK 179
>gi|70947056|ref|XP_743180.1| polyadenylate-binding protein [Plasmodium chabaudi chabaudi]
gi|56522555|emb|CAH74716.1| polyadenylate-binding protein, putative [Plasmodium chabaudi
chabaudi]
Length = 629
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR----FAFVEFTDEEGARAAL 235
++YV D+ + VTE L +F T G V+ R+C D SV R +A+V + + A AL
Sbjct: 17 SLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRD--SVTRKSLGYAYVNYHNLADAERAL 74
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
L + ++ P++ + +P+ R+ + I+ N+DK + D K
Sbjct: 75 D----TLNYTNIKGQPARLMWSHRDPSL-------RKSGTGNIFVKNLDKTI---DNKAL 120
Query: 296 FE--SVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
F+ S+ G + ++ D + S FV + ESA A+ +G LGS + V
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYV 176
>gi|340381668|ref|XP_003389343.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Amphimedon queenslandica]
Length = 402
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 87/185 (47%), Gaps = 18/185 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC---GDPNSVLRFAFVEFTDEEGARAALS 236
T++VS++ E+QL LF CGQV D R+ G +A+VEFT E AL
Sbjct: 170 TIFVSNLASDTDEDQLHKLFSQCGQVADVRLIKKFGGKFGTNVYAYVEFTTSEPTVEALK 229
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T+L R + + A + ++ T++ TN+ +++ D++ F
Sbjct: 230 LDHTVLN---SRAIYVSSCNADRQNKYNNKA---------TVFVTNVAHDLSERDLEDIF 277
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSPSKTPV 354
+ V +V+ +RL+ + + S A++E+ SA AA+ + + I+V+ SK P
Sbjct: 278 KEV-DQVKAVRLVRNKKGRSKGFAYIEYDTESSARAAVFQLNDREMAGKNIKVAISKPPA 336
Query: 355 RPRAP 359
P
Sbjct: 337 SKELP 341
>gi|327299776|ref|XP_003234581.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
gi|326463475|gb|EGD88928.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
Length = 507
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 231
E +R +YV +D +VTE+ L +F T G V +I D N L + F+E+ D A
Sbjct: 98 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFQSKGLNYGFIEYDDPGAA 157
Query: 232 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 289
RA +L G + +R VN + + + + S I+ ++ +V
Sbjct: 158 ERAMQTLNGRRVHQSEIR----------VNWAYQSNTASKEDTSSHFHIFVGDLSNEVND 207
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 344
++ L S CG V R++ D + +AF E A AE A+++++ G LGS
Sbjct: 208 -EVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMD--GEWLGSRA 264
Query: 345 IR 346
IR
Sbjct: 265 IR 266
>gi|226295167|gb|EEH50587.1| RNA splicing factor Pad-1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 16/199 (8%)
Query: 160 GKRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICG 212
G R RT Q +DE RRTV+V + ++ ++L F G Q+V R+ G
Sbjct: 184 GGRGRRSRTPEPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSG 243
Query: 213 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDE 270
V +VEF DEE A+ L G L P+ ++ ++ NP S ++
Sbjct: 244 RSKGV---GYVEFKDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE-ANVSGNQ 299
Query: 271 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 329
+ +Y NI +T+ D++ FE GE+ ++L + +R FV+F A
Sbjct: 300 NSIPFHRLYVGNIHFSITESDLQKVFEPF-GELDFVQLQKEEGGRSRGYGFVQFRDPNQA 358
Query: 330 IAAL-NCSGAVLGSLPIRV 347
AL +G L PIRV
Sbjct: 359 REALEKMNGFDLAGRPIRV 377
>gi|225466283|ref|XP_002270255.1| PREDICTED: uncharacterized protein LOC100244513 [Vitis vinifera]
Length = 926
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
+ +++T+ VS++ +T EQL LF CG VV+C I + FA++E++ E A AA
Sbjct: 339 DALKKTLQVSNLSPLLTVEQLKQLFSFCGTVVECSITDSKH----FAYIEYSKPEEATAA 394
Query: 235 LSLAGTMLGFYPVRV-----LPSKTAI--APVNPTFLP 265
L+L +G P+ V LP K AI +P+ LP
Sbjct: 395 LALNNMDVGGRPLNVEMAKSLPPKPAILNSPLASPSLP 432
>gi|156103277|ref|XP_001617331.1| polyadenylate-binding protein [Plasmodium vivax Sal-1]
gi|148806205|gb|EDL47604.1| polyadenylate-binding protein, putative [Plasmodium vivax]
Length = 883
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR----FAFVEFTDEEGARAAL 235
++YV D+++ VTE L +F T G V R+C D SV R +A+V + + A AL
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRD--SVTRKSLGYAYVNYHNLADAERAL 74
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
L + ++ P++ + +P+ R+ + I+ N+DK + D K
Sbjct: 75 D----TLNYTNIKGQPARLMWSHRDPSL-------RKSGAGNIFVKNLDKSI---DNKAL 120
Query: 296 FE--SVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
F+ S+ G + ++ D + S FV + ESA A+ +G LGS + V
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYV 176
>gi|221061487|ref|XP_002262313.1| polyadenylate-binding protein [Plasmodium knowlesi strain H]
gi|193811463|emb|CAQ42191.1| polyadenylate-binding protein, putative [Plasmodium knowlesi strain
H]
Length = 874
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR----FAFVEFTDEEGARAAL 235
++YV D+++ VTE L +F T G V R+C D SV R +A+V + + A AL
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRD--SVTRKSLGYAYVNYHNLADAERAL 74
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
L + ++ P++ + +P+ R+ + I+ N+DK + D K
Sbjct: 75 D----TLNYTNIKGQPARLMWSHRDPSL-------RKSGAGNIFVKNLDKSI---DNKAL 120
Query: 296 FE--SVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
F+ S+ G + ++ D + S FV + ESA A+ +G LGS + V
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYV 176
>gi|413918857|gb|AFW58789.1| hypothetical protein ZEAMMB73_983608 [Zea mays]
Length = 412
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 22/177 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDE-EGARAALS 236
++YV D++ V++ QL LF GQVV R+C D S L +A+V +++ + ARA
Sbjct: 35 SLYVGDLEGAVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNYSNPLDAARALEV 94
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L L P+RV+ S R R S I+ N+DK + + F
Sbjct: 95 LNFAALNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDKTIDNKTLHETF 142
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVSP 349
S G + ++ D S FV++ A++AI +LN G ++ P+ V P
Sbjct: 143 SSF-GTILSCKVAVDEAGQSKGFGFVQYDKEEAAQNAIKSLN--GMLINDKPVFVGP 196
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 220
KRR +A D+ +Y+ ++D + ++QL LF G++ ++ D N + +
Sbjct: 299 KRRFEQSLKDAA-DKYQGLNLYLKNLDDSIGDDQLCELFSNFGKITSYKVMRDQNGLSKG 357
Query: 221 A-FVEF-TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTI 278
+ FV F T EE ++A + G M+ P+ V F R ED + M T+
Sbjct: 358 SGFVAFSTREEASQALTEMNGKMISGKPLYV------------AFAQRKEDRKAMLQVTV 405
>gi|357154719|ref|XP_003576878.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 653
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D V + QL +F G VV R+C D + L +A+V + A AL
Sbjct: 35 SLYVGDLDMSVQDAQLFDVFAQIGGVVSVRVCRDVTTRKSLGYAYVNYNTPADAARALE- 93
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
ML F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 94 ---MLNFTPINGRPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALYD 140
Query: 298 SVC--GEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
+ C G + ++ D ++ FV++ E+A AA+ +G ++ + V P
Sbjct: 141 TFCVFGNILSCKVATDASGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGP 196
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 231
D+ +Y+ ++D V +E+L LF G + C++ D N R + FV F + E+ +
Sbjct: 311 DKYQNTNLYLKNLDDTVDDEKLRELFAEFGAITSCKVMRDSNGASRGSGFVAFKSAEDAS 370
Query: 232 RAALSLAGTMLGFYPVRV 249
RA + M+G P+ V
Sbjct: 371 RALAEMNNKMVGSKPLYV 388
>gi|392558545|gb|EIW51732.1| polyadenylate binding protein [Trametes versicolor FP-101664 SS1]
Length = 631
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 14/177 (7%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T +++ ++D+Q+ + L F G V+ C++ D + + +
Sbjct: 78 CRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGY 137
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 278
FV + E A A+ ML L K + + R EM ++ I
Sbjct: 138 GFVHYETAEAAETAIKAVNGML-------LNDKKVYVGHHISRKERQSKIEEMKNQFTNI 190
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
Y N+D +VTQ + FE + + D S FV F E A AA+
Sbjct: 191 YVKNVDPEVTQEEFVQLFEPFGRITSAVLQVDDEGKSRGFGFVNFDTHEEAHAAVEA 247
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L +F G V R+C D L +A+V + + +G RA
Sbjct: 8 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 67
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L +++ R++ S+ R R+ I+ N+D+++ + F
Sbjct: 68 LNYSLIKGRACRIMWSQ------------RDPALRKTGQGNIFIKNLDEQIDNKALHDTF 115
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G V ++ D + S FV + AE+A A+ +L
Sbjct: 116 -AAFGNVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAVNGML 159
>gi|449497695|ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 10/196 (5%)
Query: 162 RRMNCR--TSNAQQD-EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL 218
RRM + T+ + D E +RTV+ + + TE + F G+V D R+ D NS
Sbjct: 211 RRMKEKKGTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 270
Query: 219 R--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNP-TFLPRSEDEREMCS 275
+VEF D A++L+G +L PV V PS+ V T
Sbjct: 271 SKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTGASGAGPYGAVD 330
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL 333
R +Y N+ +T+ ++ FE+ G V+ ++L D + H FV+FA E A AA
Sbjct: 331 RKLYVGNLHFNMTETHLREIFEAF-GPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQ 389
Query: 334 NCSGAV-LGSLPIRVS 348
+ +G + + I+VS
Sbjct: 390 SLNGKLEIAGRTIKVS 405
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 262 TFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIA 319
T P ++ ER+ RT++ + K T+ D+ FF S G+V+ +RL+ D + S +
Sbjct: 219 TTEPEADPERDQ--RTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVG 275
Query: 320 FVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
+VEF A S A+ SG +L P+ V PS+
Sbjct: 276 YVEFYDAMSVPMAIALSGQLLLGQPVMVKPSE 307
>gi|297741250|emb|CBI32381.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 18/175 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTD-EEGARAALS 236
++YV D+D VT+ QL LF QVV R+C D + L + +V +TD E+ ARA
Sbjct: 170 SLYVGDLDLNVTDSQLHDLFSQLAQVVSIRVCRDSTTHRSLGYGYVNYTDLEDAARALDV 229
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T L P+R++ S R R+ + I+ N+DK + + F
Sbjct: 230 LNFTPLNGKPIRIMYSH------------RDPSIRKSGTGNIFIKNLDKGIDHKALHDTF 277
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 349
S G + ++ D ++ FV+F E+A A++ +G +L + V P
Sbjct: 278 -SAFGNILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKLNGMLLNDKQVFVGP 331
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTD-EEGARAALSLA 238
+Y+ ++D + +++L LF G + C++ DPN + R + FV F+ EE +RA +
Sbjct: 453 LYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFSSPEEASRALAEMN 512
Query: 239 GTMLGFYPVRV 249
M+ P+ V
Sbjct: 513 SKMVVSKPLYV 523
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 28/184 (15%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T +++ ++D+Q+ + L F G V+ C++ D + + +
Sbjct: 115 CRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGY 174
Query: 221 AFVEFTDEEGARAALSLAGTML--------GFYPVRVLPSKTAIAPVNPTFLPRSEDERE 272
FV + E A A+ ML G + R S+ R E
Sbjct: 175 GFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISRKASSRE-----------RQSKLEE 223
Query: 273 MCSR--TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 329
M ++ IY N+D +VTQ D FE G V + D Q +R FV F E A
Sbjct: 224 MKAQFTNIYVKNLDPEVTQDDFVKLFEQF-GNVTSAVIQTDEQGQSRGFGFVNFETHEEA 282
Query: 330 IAAL 333
A+
Sbjct: 283 QKAV 286
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L +F G V R+C D L +A+V + + +G RA
Sbjct: 45 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 104
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L +++ R++ S+ R R+ I+ N+D+++ + F
Sbjct: 105 LNYSLIKGRACRIMWSQ------------RDPALRKTGQGNIFIKNLDEQIDNKALHDTF 152
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G V ++ D + S FV + AE+A A+ +L
Sbjct: 153 -AAFGNVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAVNGML 196
>gi|50293737|ref|XP_449280.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690665|sp|Q6FKG4.1|PABP_CANGA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49528593|emb|CAG62254.1| unnamed protein product [Candida glabrata]
Length = 579
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 84/188 (44%), Gaps = 20/188 (10%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF 225
T+ Q E + ++YV D+D V+E L +F G V R+C D + L +A+V F
Sbjct: 24 TNEENQSETVSASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNF 83
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
D + A+ A+ L F P++ + + +P+ R+ + I+ N+
Sbjct: 84 NDHDAAKTAIE----KLNFTPIKGKLCRIMWSQRDPSL-------RKKGAGNIFIKNLHP 132
Query: 286 KVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNC-SGAVLG 341
+ D K ++ SV G + ++ D ++ +V F ESA A++ +G +L
Sbjct: 133 DI---DNKALYDTFSVFGNILSSKVATDETGKSKGFGYVHFEEDESASEAIDALNGMLLN 189
Query: 342 SLPIRVSP 349
I V P
Sbjct: 190 GQEIYVGP 197
>gi|38141765|dbj|BAD00701.1| TIA-1 homologue [Bombyx mori]
Length = 388
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D VTE L TLF G V C+I +P + +AF+EFT A
Sbjct: 3 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGND-PYAFLEFTCHTAAVT 61
Query: 234 ALSLAGTMLGFYPVRVLPSKTAI-APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL+ + VL + + +P P+++ I+ ++ ++ +
Sbjct: 62 ALAAMNKRV------VLDKEMKVNWATSPGNQPKTDTSNH---HHIFVGDLSPEIETNIL 112
Query: 293 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRV 347
+ F GE+ R++ D Q S AFV F A AE+AI A+N G LGS IR
Sbjct: 113 REAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN--GQWLGSRSIRT 169
Query: 348 SPS--KTPVR 355
+ S K P +
Sbjct: 170 NWSTRKPPAK 179
>gi|296088276|emb|CBI36502.3| unnamed protein product [Vitis vinifera]
Length = 888
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
+ +++T+ VS++ +T EQL LF CG VV+C I + FA++E++ E A AA
Sbjct: 339 DALKKTLQVSNLSPLLTVEQLKQLFSFCGTVVECSITDSKH----FAYIEYSKPEEATAA 394
Query: 235 LSLAGTMLGFYPVRV-----LPSKTAI--APVNPTFLP 265
L+L +G P+ V LP K AI +P+ LP
Sbjct: 395 LALNNMDVGGRPLNVEMAKSLPPKPAILNSPLASPSLP 432
>gi|392558318|gb|EIW51507.1| RNA-binding protein Prp24 [Trametes versicolor FP-101664 SS1]
Length = 1049
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 10/186 (5%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 236
R T+YV++ + + + TLF G++ D R S RF +V++T A AL
Sbjct: 710 RSTLYVTNFPEDADDTFIRTLFGKYGEIFDVRWPSKKFKSTRRFCYVQYTSPTSAENALE 769
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L GT + + ++ NP D + R IY + K VT+ D++ F
Sbjct: 770 LNGTDME------EGRRLSVYISNPERRKERTDS-DANEREIYIAGLSKLVTKEDLETLF 822
Query: 297 ESVCGEVQRLRL-LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
++ G V+ +R+ L D S AF+EF A AAL + L + V+ + + V+
Sbjct: 823 KT-YGNVKDVRMILDDKGKSKGFAFIEFTTEPEARAALAANNHELKKRRMAVTLADSRVK 881
Query: 356 PRAPRP 361
P+ P
Sbjct: 882 PKNKAP 887
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 162 RRMNCRTSNAQQ------DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR-ICGDP 214
RR++ SN ++ + R +Y++ + + VT+E L TLF T G V D R I D
Sbjct: 779 RRLSVYISNPERRKERTDSDANEREIYIAGLSKLVTKEDLETLFKTYGNVKDVRMILDDK 838
Query: 215 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVN--PTFLPRSEDERE 272
FAF+EFT E ARAAL+ L + V + + + P N P + E
Sbjct: 839 GKSKGFAFIEFTTEPEARAALAANNHELKKRRMAVTLADSRVKPKNKAPGY------REE 892
Query: 273 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD 311
+ +R++ N+ +G ++ E +++R+ + D
Sbjct: 893 VRNRSVRVKNLPPNTQEGLLQQALEK-HAKIKRVEVFAD 930
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 87/212 (41%), Gaps = 35/212 (16%)
Query: 136 MHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDE---VIRR-----TVYVSDID 187
M D +A T H+ + ++ +R + +E ++R TV+V D+
Sbjct: 586 MDVDPSAATGSHSKRKADDEDSAESSKRPRMALTEKHTEEQPAKLKRDRENSTVFVGDLP 645
Query: 188 QQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV 247
V +E+L LF CG + + +I PNS++ A VEF + + AAL+
Sbjct: 646 AGVEDEELRALFKDCGVIREVKITQLPNSLV--ATVEFLERDSVPAALTKDKK------- 696
Query: 248 RVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGDIKLFFESVCGEVQRL 306
RV + A+ + R T+Y TN + I+ F GE+ +
Sbjct: 697 RVRGKEIAV---------------HLAWRSTLYVTNFPEDADDTFIRTLF-GKYGEIFDV 740
Query: 307 RLLG-DYQHSTRIAFVEFAMAESAIAALNCSG 337
R ++ + R +V++ SA AL +G
Sbjct: 741 RWPSKKFKSTRRFCYVQYTSPTSAENALELNG 772
>gi|389586343|dbj|GAB69072.1| polyadenylate-binding protein, partial [Plasmodium cynomolgi strain
B]
Length = 883
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR----FAFVEFTDEEGARAAL 235
++YV D+++ VTE L +F T G V R+C D SV R +A+V + + A AL
Sbjct: 17 SLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRD--SVTRKSLGYAYVNYHNLADAERAL 74
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
L + ++ P++ + +P+ R+ + I+ N+DK + D K
Sbjct: 75 D----TLNYTNIKGQPARLMWSHRDPSL-------RKSGAGNIFVKNLDKSI---DNKAL 120
Query: 296 FE--SVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
F+ S+ G + ++ D + S FV + ESA A+ +G LGS + V
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYV 176
>gi|225677677|gb|EEH15961.1| RNA-binding protein rsd1 [Paracoccidioides brasiliensis Pb03]
Length = 600
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 16/199 (8%)
Query: 160 GKRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICG 212
G R RT Q +DE RRTV+V + ++ ++L F G Q+V R+ G
Sbjct: 184 GGRGRRSRTPEPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSG 243
Query: 213 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDE 270
V +VEF DEE A+ L G L P+ ++ ++ NP S ++
Sbjct: 244 RSKGV---GYVEFKDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE-ANVSGNQ 299
Query: 271 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 329
+ +Y NI +T+ D++ FE GE+ ++L + +R FV+F A
Sbjct: 300 NSIPFHRLYVGNIHFSITESDLQKVFEPF-GELDFVQLQKEEGGRSRGYGFVQFRDPNQA 358
Query: 330 IAAL-NCSGAVLGSLPIRV 347
AL +G L PIRV
Sbjct: 359 REALEKMNGFDLAGRPIRV 377
>gi|169599154|ref|XP_001793000.1| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
gi|160704547|gb|EAT90605.2| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
Length = 544
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 78/187 (41%), Gaps = 18/187 (9%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+D+ +RT++V I Q+ L F T G Q+V R+ G V +VEF D
Sbjct: 144 EDDRDKRTIFVQQISQRALTHHLLAFFETVGPVIEAQIVKDRVTGRSKGV---GYVEFKD 200
Query: 228 EEGARAALSLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 286
EE AL L G L P+ L P+ + +Y NI
Sbjct: 201 EESVAKALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGAAPGANGAPFHRLYVGNIHFS 260
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVL 340
VT+ D+ F + GE++++ L D + R + FV+ A+ A+A +N G L
Sbjct: 261 VTEQDLHTIF-APFGELEQVTLQRDETNPARSKGYGFVQFVDPTKAKEALAEMN--GFEL 317
Query: 341 GSLPIRV 347
IRV
Sbjct: 318 AGRQIRV 324
>gi|308809515|ref|XP_003082067.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116060534|emb|CAL55870.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 412
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
E +RRT +VS+ +T EQ+ LF CG +V+CR + S FAF+EF + A AA
Sbjct: 281 EELRRTAHVSNYPSALTVEQVKQLFSFCGTIVECR---EGPSGKNFAFIEFESNKEALAA 337
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
L+L G +G +RV +KT P +PR+
Sbjct: 338 LALNGMNVGGRNIRVELAKT------PRLMPRA 364
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 331
E RT + +N +T +K F S CG + R + AF+EF + A+A
Sbjct: 281 EELRRTAHVSNYPSALTVEQVKQLF-SFCGTIVECR---EGPSGKNFAFIEFESNKEALA 336
Query: 332 ALNCSGAVLGSLPIRVSPSKTP-VRPRA 358
AL +G +G IRV +KTP + PRA
Sbjct: 337 ALALNGMNVGGRNIRVELAKTPRLMPRA 364
>gi|356521983|ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 397
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 35/236 (14%)
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATL 198
+GT NG R S G+RR D+ T++V D+ VT+ L
Sbjct: 123 NGTIMPNGGQNFRLNWATLSAGERR---------HDDSPDHTIFVGDLAADVTDYLLQET 173
Query: 199 F------LTCGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLP 251
F + +VV R+ G + FV F DE E RA + G + P+R+ P
Sbjct: 174 FRARYPSIKGAKVVIDRLTGRTKG---YGFVRFGDESEQVRAMTEMQGVLCSTRPMRIGP 230
Query: 252 SK-----TAIAPVNPTFLPR-SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQR 305
+ T P P+ +++E + + TI+ N+D VT ++ F GE+
Sbjct: 231 ASNKNPSTQSQPKASYQNPQGAQNEHDPNNTTIFVGNLDPNVTDDHLRQVFGHY-GELVH 289
Query: 306 LRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRA 358
+++ R FV+FA AE A+ LN G +LG +R+S ++P +A
Sbjct: 290 VKIPA----GKRCGFVQFADRSCAEEALRVLN--GTLLGGQNVRLSWGRSPSNKQA 339
>gi|449448446|ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 10/196 (5%)
Query: 162 RRMNCR--TSNAQQD-EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL 218
RRM + T+ + D E +RTV+ + + TE + F G+V D R+ D NS
Sbjct: 211 RRMKEKKDTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 270
Query: 219 R--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNP-TFLPRSEDEREMCS 275
+VEF D A++L+G +L PV V PS+ V T
Sbjct: 271 SKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTGASGAGPYGAVD 330
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL 333
R +Y N+ +T+ ++ FE+ G V+ ++L D + H FV+FA E A AA
Sbjct: 331 RKLYVGNLHFNMTETHLREIFEAF-GPVELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQ 389
Query: 334 NCSGAV-LGSLPIRVS 348
+ +G + + I+VS
Sbjct: 390 SLNGKLEIAGRTIKVS 405
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 262 TFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIA 319
T P ++ ER+ RT++ + K T+ D+ FF S G+V+ +RL+ D + S +
Sbjct: 219 TTEPEADPERDQ--RTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVG 275
Query: 320 FVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
+VEF A S A+ SG +L P+ V PS+
Sbjct: 276 YVEFYDAMSVPMAIALSGQLLLGQPVMVKPSE 307
>gi|126649325|ref|XP_001388334.1| poly(a)-binding protein fabm [Cryptosporidium parvum Iowa II]
gi|32398879|emb|CAD98589.1| putative poly(a)-binding protein fabm, possible [Cryptosporidium
parvum]
gi|126117428|gb|EAZ51528.1| poly(a)-binding protein fabm, putative [Cryptosporidium parvum Iowa
II]
Length = 746
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 20/177 (11%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAA 234
+ ++YV D+D VTE L +F + V RIC D L +A+V + A A
Sbjct: 10 VSASLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERA 69
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L L F +R P + +P R ++ N+DK + D K
Sbjct: 70 LD----TLNFTCIRGRPCRIMWCLRDPA-------SRRNNDGNVFVKNLDKSI---DNKT 115
Query: 295 FFE--SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRV 347
F+ S+ G + ++ D + S F+ F A+SA A++ +GAVLG PI V
Sbjct: 116 LFDTFSLFGNIMSCKIATDVEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYV 172
>gi|67623121|ref|XP_667843.1| poly(a)-binding protein fabm [Cryptosporidium hominis TU502]
gi|54659004|gb|EAL37605.1| poly(a)-binding protein fabm [Cryptosporidium hominis]
Length = 746
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 20/177 (11%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAA 234
+ ++YV D+D VTE L +F + V RIC D L +A+V + A A
Sbjct: 10 VSASLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERA 69
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L L F +R P + +P R ++ N+DK + D K
Sbjct: 70 LD----TLNFTCIRGRPCRIMWCLRDPA-------SRRNNDGNVFVKNLDKSI---DNKT 115
Query: 295 FFE--SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRV 347
F+ S+ G + ++ D + S F+ F A+SA A++ +GAVLG PI V
Sbjct: 116 LFDTFSLFGNIMSCKIATDVEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYV 172
>gi|403335220|gb|EJY66784.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 307
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 22/176 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALSL 237
T+YV ++D +V EE + LFL CG +V+ I D N + FVEF EE A A+ +
Sbjct: 21 TLYVGNLDTKVNEELVWELFLQCGAIVNVHIPRDKVTNEHSGYGFVEFKTEEDADYAIKI 80
Query: 238 AGTMLGF-YPVRVLPSKTAIAPVNPTFLPRSEDER-EMCSRTIYCTNIDKKVTQGDIKLF 295
+ F P++V + S+D+R + ++ N+ + V + ++
Sbjct: 81 MHMVKLFGKPIKVNKA--------------SQDKRTQEVGANVFVGNLHEDVDEKMLRDV 126
Query: 296 FESVCGEVQRLRLLGD--YQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 348
F S G V +++ D Q S R FV + ES+ A++ +G L PI VS
Sbjct: 127 FSSF-GIVLSTKIMRDPETQVSKRYGFVSYDNFESSDASIQAMNGQYLCGKPIDVS 181
>gi|357473893|ref|XP_003607231.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355508286|gb|AES89428.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 643
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 10/182 (5%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+T++V ++ V + F CG+VVD R D + F VEF E A++AL +
Sbjct: 384 KTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSALEM 443
Query: 238 AGTMLGFYPVR--VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL- 294
G L VR + + A P N + R S+T++ DK + + +I+
Sbjct: 444 NGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGRGQ-SQTVFVRGFDKNLGEDEIRAK 502
Query: 295 ---FFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSP 349
F CGE R+ + D++ +S A+++F ++S AL + L + V
Sbjct: 503 LMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDSFSKALELHESELDGYQLSVDE 562
Query: 350 SK 351
+K
Sbjct: 563 AK 564
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
S+T++ N+ V + DI+ FF+ CGEV +R D + + VEFA AE+A +AL
Sbjct: 383 SKTLFVGNLSFSVQRSDIEKFFQD-CGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSAL 441
Query: 334 NCSGAVLGSLPIRV 347
+G L +R+
Sbjct: 442 EMNGQELLQRAVRL 455
>gi|195400098|ref|XP_002058655.1| GJ14540 [Drosophila virilis]
gi|194142215|gb|EDW58623.1| GJ14540 [Drosophila virilis]
Length = 472
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 90/189 (47%), Gaps = 19/189 (10%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 292
AL+ RV K VN P + + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNK-------RVFLDKE--IKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETL 111
Query: 293 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRV 347
+ F GE+ R++ D Q S AFV F A AE+AI A+N G +GS IR
Sbjct: 112 REAFAPF-GEISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMN--GQWIGSRSIRT 168
Query: 348 SPSKTPVRP 356
+ S + P
Sbjct: 169 NWSTRKLPP 177
>gi|295664082|ref|XP_002792593.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278707|gb|EEH34273.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 596
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 88/199 (44%), Gaps = 16/199 (8%)
Query: 160 GKRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICG 212
G R RT Q +DE RRTV+V + ++ ++L F G Q+V R+ G
Sbjct: 180 GGRGRRSRTPEPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSG 239
Query: 213 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDE 270
V +VEF DEE A+ L G L P+ ++ ++ NP S ++
Sbjct: 240 RSKGV---GYVEFKDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE-ANVSGNQ 295
Query: 271 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 329
+ +Y NI +T+ D++ FE GE+ ++L + +R FV+F A
Sbjct: 296 NSIPFHRLYVGNIHFSITESDLQKVFEPF-GELDFVQLQKEEGGRSRGYGFVQFRDPNQA 354
Query: 330 IAAL-NCSGAVLGSLPIRV 347
AL +G L PIRV
Sbjct: 355 REALEKMNGFDLAGRPIRV 373
>gi|302803765|ref|XP_002983635.1| hypothetical protein SELMODRAFT_234317 [Selaginella moellendorffii]
gi|300148472|gb|EFJ15131.1| hypothetical protein SELMODRAFT_234317 [Selaginella moellendorffii]
Length = 573
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 13/190 (6%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 220
K+++ +T + E +T++V +I VT+E LA F G+VV RI N F
Sbjct: 300 KQKLEVKTPAKEGGE--SKTLFVRNIPFSVTDEDLAQYFEDAGEVVGVRIAQGDNGPKGF 357
Query: 221 AFVEFTDEEGARAALSLAGTMLG---FYPVRVLPSKT-AIAPVNPTFLPRSEDEREMCSR 276
A VEF+ E A+ AL+ +G +G Y P T A P P R+
Sbjct: 358 AHVEFSTEAAAQKALNKSGQDMGGRRIYCDLANPRGTPASGPKRDRPSPGFNGNRKTSGN 417
Query: 277 TIYCTNIDKKVTQGDIK----LFFESVCGEVQRLRLLGDYQHS--TRIAFVEFAMAESAI 330
T++ DK + I+ F+S CG ++R+++ D + A++EF+ +
Sbjct: 418 TVFVKGFDKYQEEDSIRDSLTKHFKS-CGTIERVKIPTDRETGNIKGFAYIEFSTDGAPA 476
Query: 331 AALNCSGAVL 340
A G+ L
Sbjct: 477 KAKELHGSDL 486
>gi|356563290|ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 402
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 101/236 (42%), Gaps = 35/236 (14%)
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATL 198
+GT NG R +S G+RR D+ T++V D+ VT+ L
Sbjct: 127 NGTIMPNGGQNFRLNWATFSAGERR---------HDDSPDHTIFVGDLAADVTDYLLQET 177
Query: 199 F------LTCGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLP 251
F +VV R+ G + FV F DE E RA + G + P+R+ P
Sbjct: 178 FRARYPSAKGAKVVIDRLTGRTKG---YGFVRFGDESEQVRAMSEMQGVLCSTRPMRIGP 234
Query: 252 SK-----TAIAPVNPTFLPR-SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQR 305
+ T P P+ +++E + + TI+ N+D VT ++ F GE+
Sbjct: 235 ASNKNPSTQSQPKASYQNPQGAQNEHDPNNTTIFVGNLDPNVTDDHLRQVFGQY-GELVH 293
Query: 306 LRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRA 358
+++ R FV+FA AE A+ LN G +LG +R+S ++P +A
Sbjct: 294 VKIPA----GKRCGFVQFADRSCAEEALRVLN--GTLLGGQNVRLSWGRSPSNKQA 343
>gi|46128087|ref|XP_388597.1| hypothetical protein FG08421.1 [Gibberella zeae PH-1]
Length = 784
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 130 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDETGASKGY 189
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE ++A + G +L V V +P K R EM +
Sbjct: 190 GFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 238
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
+Y NI VT+ D + FE G+V L D + +R FV F ESA A+
Sbjct: 239 FTNVYVKNIAADVTEDDFRQLFEKY-GDVTSSSLARDQEGKSRGFGFVNFTTHESASKAV 297
Query: 334 N 334
+
Sbjct: 298 D 298
>gi|82595449|ref|XP_725855.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481012|gb|EAA17420.1| polyA binding protein-related [Plasmodium yoelii yoelii]
Length = 859
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR----FAFVEFTDEEGARAAL 235
++YV D+ + VTE L +F T G V+ R+C D SV R +A+V + + A AL
Sbjct: 17 SLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRD--SVTRKSLGYAYVNYHNLADAERAL 74
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
L + ++ P++ + +P+ R+ + I+ N+DK + D K
Sbjct: 75 D----TLNYTNIKGQPARLMWSHRDPSL-------RKSGTGNIFVKNLDKTI---DNKAL 120
Query: 296 FE--SVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
F+ S+ G + ++ D + S FV + ESA A+ +G LGS + V
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYV 176
>gi|405953553|gb|EKC21194.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Crassostrea gigas]
Length = 970
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 36/205 (17%)
Query: 168 TSNAQQD-EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 225
A+QD + RRT +VS++D + E+++ +F CG++ D R+ + +A+VEF
Sbjct: 760 VEKAEQDPDKSRRTSFVSNLDYSIDEDRIGQIFAKCGEMTDIRLVKTIKGKSKGYAYVEF 819
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVN--PTFLPRSEDEREMCSRTIYCTNI 283
DE G AL L T P+ P F+ + ED + ++ + T +
Sbjct: 820 KDELGVLEALKLDRT-----------------PIEGRPMFVSKCEDRSQKKAQFKFSTAM 862
Query: 284 DKK-----------VTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFA-MAESAI 330
+K I++F E G V+ +R++ + + +A+VEF ++A
Sbjct: 863 EKNKLFIKNLPFTCSKDALIQIFSEH--GPVKEVRMVTYRSGAPKGLAYVEFEDEQDAAK 920
Query: 331 AALNCSGAVLGSLPIRVSPSKTPVR 355
A + G +G I V+ S P R
Sbjct: 921 AVMKTDGLKIGDHEIEVAISNPPQR 945
>gi|406859894|gb|EKD12956.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 1039
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 77/174 (44%), Gaps = 18/174 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
T+YV++ E L LF CG++ R NS RF ++ F + A AA L
Sbjct: 654 TLYVTNYPPTADENYLRKLFKECGEIFSIRWPSLKVNSHRRFCYISFRTVDAAAAATKLD 713
Query: 239 GTML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC---SRTIYCTNIDKKVTQGDIKL 294
G L G Y + S P + +R+ R I+ T+ID +T +++
Sbjct: 714 GQSLGGMYKLVAKHSD-----------PPNRQKRQGALAEGREIHVTSIDPSITPDELEK 762
Query: 295 FFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
F S G+V+R+ LL ++ AFV FA E A AAL+ L S + V
Sbjct: 763 LF-SKYGKVERVNLLTKVSGESKGAAFVSFATKEGAAAALDLDKTKLKSRVLNV 815
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDCRICGDPNSVLRFAFVEFTDEEGARAA 234
R ++V+ ID +T ++L LF G+V + ++ G+ AFV F +EGA AA
Sbjct: 744 REIHVTSIDPSITPDELEKLFSKYGKVERVNLLTKVSGESKGA---AFVSFATKEGAAAA 800
Query: 235 LSLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRS 267
L L T L + V + T P TF RS
Sbjct: 801 LDLDKTKLKSRVLNVEMAGATNFKPTATTFSKRS 834
>gi|1737492|gb|AAB38974.1| poly(A)-binding protein [Triticum aestivum]
Length = 651
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D V + QL +F G VV R+C D S L +A+V + A AL
Sbjct: 33 SLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAARALE- 91
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
ML F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 92 ---MLNFTPINGRPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALYD 138
Query: 298 SVC--GEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
+ C G + ++ D ++ FV++ E+A AA+ +G ++ + V P
Sbjct: 139 TFCVFGNILSCKVATDPAGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGP 194
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 231
D+ +Y+ ++D V +E+L LF G + C++ D N R + FV F + ++ +
Sbjct: 309 DKYQNTNLYLKNLDDTVDDEKLRELFAEFGTITSCKVMRDSNGASRGSGFVAFKSADDAS 368
Query: 232 RAALSLAGTMLGFYPVRV 249
RA + M+G P+ V
Sbjct: 369 RALAEMNNKMVGNKPLYV 386
>gi|385305500|gb|EIF49466.1| pub1p [Dekkera bruxellensis AWRI1499]
Length = 489
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCG-QVVDCRICGDPNSV-LRFAFVEFTDEEGAR 232
E+ + T+YV +ID V+E+ L LF + G Q+ +I D N +AF+E+ D A
Sbjct: 153 ELSKTTLYVGNIDNSVSEDMLRDLFGSLGAQIQSIKILYDKNKRGFNYAFIEYEDHXKAE 212
Query: 233 AAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
AL +L GT+L YP+++ T+ R++ R + T++ ++ ++
Sbjct: 213 NALQALNGTVLANYPLKI------------TWAYRTQQSRSGENFTLFVGDLSPEIDDDS 260
Query: 292 IKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAM---AESAIAALNCSGAVLGSLPIR 346
+ F VQ ++ D + S FV F AE+ + +N G LG IR
Sbjct: 261 LAATFSKFPSFVQA-NVMWDMKTGRSRGYGFVSFQNNQDAETVLQTMN--GMSLGGRSIR 317
Query: 347 V 347
+
Sbjct: 318 L 318
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 271 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY-QHSTRIAFVEF---AMA 326
RE+ T+Y NID V++ ++ F S+ ++Q +++L D + AF+E+ A
Sbjct: 152 RELSKTTLYVGNIDNSVSEDMLRDLFGSLGAQIQSIKILYDKNKRGFNYAFIEYEDHXKA 211
Query: 327 ESAIAALNCSGAVLGSLPIRVS 348
E+A+ ALN G VL + P++++
Sbjct: 212 ENALQALN--GTVLANYPLKIT 231
>gi|315052890|ref|XP_003175819.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
gi|311341134|gb|EFR00337.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
Length = 506
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 84/186 (45%), Gaps = 27/186 (14%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-------LRFAFVEFTD 227
E +R +YV +D +VTE+ L +F T G V +I D N+ L + F+E+ D
Sbjct: 93 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNASAQFQSKGLNYGFIEYDD 152
Query: 228 EEGA-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDK 285
A RA +L G + +R VN + + + + S I+ ++
Sbjct: 153 PGAAERAMQTLNGRRVHQSEIR----------VNWAYQSNTASKEDTSSHFHIFVGDLSN 202
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVL 340
+V ++ L S CG V R++ D + +AF E A AE A+++++ G L
Sbjct: 203 EVND-EVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMD--GEWL 259
Query: 341 GSLPIR 346
GS IR
Sbjct: 260 GSRAIR 265
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAA 234
+ ++YV D+D VT+ QL LF GQVV R+C D + L + +V +++ + A A
Sbjct: 32 VTTSLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARA 91
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L + L F P+ P + + +P+ R+ I+ N+DK + +
Sbjct: 92 LDV----LNFTPLNNRPIRIMYSHRDPSI-------RKSGQGNIFIKNLDKAIDHKALHD 140
Query: 295 FFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
F S G + ++ D S FV+F E+A A+ +G +L + V P
Sbjct: 141 TFSSF-GNILSCKVAVDGSGQSKGYGFVQFDTEEAAQKAIEKLNGMLLNDKQVYVGP 196
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+YV ++D + +E+L LF + G + C++ DPN V R + FV F T EE +RA L +
Sbjct: 318 LYVKNLDDSIADEKLKELFSSYGTITSCKVMRDPNGVSRGSGFVAFSTPEEASRALLEMN 377
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
G M+ P+ V T R ED R
Sbjct: 378 GKMVASKPLYV------------TLAQRKEDRR 398
>gi|452845447|gb|EME47380.1| hypothetical protein DOTSEDRAFT_69347 [Dothistroma septosporum
NZE10]
Length = 607
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 82/188 (43%), Gaps = 25/188 (13%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGA 231
DE RRTV+V + ++ +L F G VVD +I D S +VEF +EE
Sbjct: 216 DERDRRTVFVQQLAARLRSRELKEFFEQAGPVVDAQIVKDRVSGRSKGVGYVEFKEEESV 275
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--------RTIYCTNI 283
+ A++L G L P+ IA + R E + +Y NI
Sbjct: 276 QKAIALTGQKLLGIPI--------IAQLTEAEKNRQARNTEGTATQSNGIPFHRLYVGNI 327
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALNCSGAV 339
+T+ D+K FE GE++ ++L + ++ + F++ A+ A+ +N G
Sbjct: 328 HFSITEDDLKNVFEPF-GELEFVQLQKEEAGRSKGYGFVQFIDPTQAKEALEKMN--GFE 384
Query: 340 LGSLPIRV 347
L PIRV
Sbjct: 385 LAGRPIRV 392
>gi|425772940|gb|EKV11320.1| Polyadenylate-binding protein [Penicillium digitatum PHI26]
gi|425781989|gb|EKV19920.1| Polyadenylate-binding protein [Penicillium digitatum Pd1]
Length = 736
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 16/176 (9%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 116 CRIMWSQRDPALRKTGQGNVFIKNLDNAIDNKALHDTFAAFGNILSCKVAQDEFANSKGY 175
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 278
FV + E A A+ ML L K + + R EM + I
Sbjct: 176 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNI 228
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
Y NID ++T + ++ FE+ GE+ L D +R FV +A ESA AA+
Sbjct: 229 YIKNIDLEITDDEFRVMFEAF-GEITSATLSHDQDGKSRGFGFVNYANHESAEAAV 283
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 46 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 105
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 106 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDNAIDNKALHDTF 153
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 154 -AAFGNILSCKVAQDEFANSKGYGFVHYETAEAANNAIKHVNGML 197
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 27/129 (20%)
Query: 122 FFGPNGFGYT--------NNFIMHTDGTANTN-----GHTTTRRKRNGYSQGKRRMNCRT 168
F G+G+ NN I H +G + GH +++ R + M
Sbjct: 169 FANSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFE---EMKANF 225
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD 227
+N +Y+ +ID ++T+++ +F G++ + D + R F FV + +
Sbjct: 226 TN----------IYIKNIDLEITDDEFRVMFEAFGEITSATLSHDQDGKSRGFGFVNYAN 275
Query: 228 EEGARAALS 236
E A AA++
Sbjct: 276 HESAEAAVA 284
>gi|297792959|ref|XP_002864364.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
gi|297310199|gb|EFH40623.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
Length = 398
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 23/207 (11%)
Query: 163 RMNCRTSNA----QQDEVIRRTVYVSDIDQQVTEEQLATLFLTC-GQVVDCRICGDPNS- 216
R+N + A Q E T++V D+ +VT+ L+ F G V ++ D +
Sbjct: 138 RLNWAQAGAGEKRHQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVVDRTTG 197
Query: 217 -VLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLPSKTAIA-PVNPTFLPRSE----D 269
+ FV F DE E RA + G P+R+ P+ A P+ P ++
Sbjct: 198 RSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGGNAG 257
Query: 270 EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF---AMA 326
+ + + TI+ +D VT ++K F GE+ +++ R FV++ A A
Sbjct: 258 DSDPNNTTIFVGGLDANVTDDELKSIFGQF-GELLHVKI----PPGKRCGFVQYANRATA 312
Query: 327 ESAIAALNCSGAVLGSLPIRVSPSKTP 353
E A++ LN G LG IR+S ++P
Sbjct: 313 EHALSVLN--GTQLGGQSIRLSWGRSP 337
>gi|357473911|ref|XP_003607240.1| RNA-binding protein [Medicago truncatula]
gi|355508295|gb|AES89437.1| RNA-binding protein [Medicago truncatula]
Length = 623
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 10/182 (5%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+T++V ++ V + F CG+VVD R D + F VEF E A++AL +
Sbjct: 364 KTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSALEM 423
Query: 238 AGTMLGFYPVR--VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL- 294
G L VR + + A P N + R S+T++ DK + + +I+
Sbjct: 424 NGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGRGQ-SQTVFVRGFDKNLGEDEIRAK 482
Query: 295 ---FFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSP 349
F CGE R+ + D++ +S A+++F ++S AL + L + V
Sbjct: 483 LMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDSFSKALELHESELDGYQLSVDE 542
Query: 350 SK 351
+K
Sbjct: 543 AK 544
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
S+T++ N+ V + DI+ FF+ CGEV +R D + + VEFA AE+A +AL
Sbjct: 363 SKTLFVGNLSFSVQRSDIEKFFQD-CGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSAL 421
Query: 334 NCSGAVLGSLPIRV 347
+G L +R+
Sbjct: 422 EMNGQELLQRAVRL 435
>gi|224060343|ref|XP_002300152.1| predicted protein [Populus trichocarpa]
gi|222847410|gb|EEE84957.1| predicted protein [Populus trichocarpa]
Length = 892
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE 229
A++++ +++T++VS++ +T EQL LF CG VV+C I +S A++E++ E
Sbjct: 314 KARKEDALKKTLHVSNLSPLLTVEQLKQLFSFCGTVVECAIADSKHS----AYIEYSKPE 369
Query: 230 GARAALSLAGTMLGFYPVRVLPSKT 254
A AAL+L +G P+ V +K+
Sbjct: 370 EATAALALNNMDVGGRPLNVEMAKS 394
>gi|357134255|ref|XP_003568733.1| PREDICTED: uncharacterized protein LOC100843156 [Brachypodium
distachyon]
Length = 786
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 227
T + + E +++ V +S++ +T E L LF CG+VVDC I + A+VE++
Sbjct: 342 TGSVDKAEALKKMVQISNLSLLLTVEHLKQLFGYCGKVVDCTIT----ETKQTAYVEYSK 397
Query: 228 EEGARAALSLAGTMLGFYPVRV-----LPSKTAIAPVN 260
E A AAL+L +G P+ V LP KT +A N
Sbjct: 398 PEEATAALALNNMDVGGRPLNVEMAKTLPPKTNLANSN 435
>gi|68070939|ref|XP_677383.1| polyadenylate-binding protein [Plasmodium berghei strain ANKA]
gi|56497479|emb|CAH95361.1| polyadenylate-binding protein, putative [Plasmodium berghei]
Length = 833
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 24/176 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR----FAFVEFTDEEGARAAL 235
++YV D+ + VTE L +F T G V+ R+C D SV R +A+V + + A AL
Sbjct: 17 SLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRD--SVTRKSLGYAYVNYHNLADAERAL 74
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
L + ++ P++ + +P+ R+ + I+ N+DK + D K
Sbjct: 75 D----TLNYTNIKGQPARLMWSHRDPSL-------RKSGTGNIFVKNLDKTI---DNKAL 120
Query: 296 FE--SVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
F+ S+ G + ++ D + S FV + ESA A+ +G LGS + V
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYV 176
>gi|302817804|ref|XP_002990577.1| hypothetical protein SELMODRAFT_448081 [Selaginella moellendorffii]
gi|300141745|gb|EFJ08454.1| hypothetical protein SELMODRAFT_448081 [Selaginella moellendorffii]
Length = 602
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 19/201 (9%)
Query: 158 SQGKRRMNCRTSNAQQDEVI--------RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR 209
S+ ++ N + + + DEV +T++V +I VT+E LA F G+VV R
Sbjct: 316 SKKQKLENGKAAATKTDEVKTPAKEAGESKTLFVRNIPFSVTDEDLAQYFEDAGEVVGVR 375
Query: 210 ICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLG---FYPVRVLPSKT-AIAPVNPTFLP 265
I N FA VEF+ E A+ AL+ +G +G Y P T A P P
Sbjct: 376 IAQGDNGPKGFAHVEFSTEAAAQKALNKSGQDMGGRRIYCDLANPRGTPASGPKRDRPSP 435
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIK----LFFESVCGEVQRLRLLGDYQHS--TRIA 319
R+ T++ DK + I+ F+S CG ++R+++ D + A
Sbjct: 436 GFNGNRKTSGNTVFVKGFDKYQEEDSIRESLTKHFKS-CGTIERVKIPTDRETGNIKGFA 494
Query: 320 FVEFAMAESAIAALNCSGAVL 340
++EF+ + A G+ L
Sbjct: 495 YIEFSTDGAPAKAKELHGSDL 515
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 13/187 (6%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEF 225
TS +Q+ TV+V + + + LA+ F +CG+VV RI D ++ F +VEF
Sbjct: 195 TSEGEQEAT--NTVFVGGLSWNIDNDWLASEFASCGEVVSARIVLDRDTQRSRGFGYVEF 252
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
D + A A+ G L VRV + A P D+R + T++ ++
Sbjct: 253 ADVDSAIKAIEFEGKELDGRAVRVNFA-NARKPDADKRAKVFNDKRSPPADTLWIGSLPF 311
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHST-----RIAFVEFAMAESAIAALNCSGAVL 340
T+ I F G+VQ +RL D + + F + A A +A+ ALN G+
Sbjct: 312 DTTEDHIYETF-GEYGDVQSVRLPTDRETGAAKGFGYVTFGDVAQATAALEALN--GSEF 368
Query: 341 GSLPIRV 347
GS IR+
Sbjct: 369 GSRRIRI 375
>gi|380478594|emb|CCF43506.1| CC1-like family splicing factor [Colletotrichum higginsianum]
Length = 565
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEF 225
T +DE RRTV+V + ++ L F G V + +I D S +VEF
Sbjct: 169 TPQLTEDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVTEAQIVKDRISQRSKGVGYVEF 228
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRSEDEREMCSR 276
+E+ AL L G L P+ V ++ T +P +P
Sbjct: 229 KNEDSVTQALQLTGQKLLGIPIIVQMTEAEKNRQVRTTETTSAHPNSIP---------FH 279
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-N 334
+Y NI VT+ D++ FE GE++ ++L D +R FV++ A A AL
Sbjct: 280 RLYVGNIHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQYREASQAREALEK 338
Query: 335 CSGAVLGSLPIRV 347
+G L PIRV
Sbjct: 339 MNGFDLAGRPIRV 351
>gi|237833723|ref|XP_002366159.1| polyadenylate-binding protein, putative [Toxoplasma gondii ME49]
gi|211963823|gb|EEA99018.1| polyadenylate-binding protein, putative [Toxoplasma gondii ME49]
Length = 768
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 27/220 (12%)
Query: 137 HTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLA 196
HT G AN +G + + MN +N + ++YV D+ Q VTE L
Sbjct: 46 HTAGNANVSGGVSGTTTAPAGQRPNGGMNAGAAN-----FVSPSLYVGDLHQDVTEAMLF 100
Query: 197 TLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSK 253
+F + G V R+C D L +A+V + + A +L +L T++ P R++
Sbjct: 101 EVFNSVGPVTSIRVCRDTVTRRSLGYAYVNYQGIQDAERSLDTLNYTVIKGQPCRIM--- 157
Query: 254 TAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRL-LG 310
+ R R+ + I+ N+DK + D K ++ S+ G + ++ +
Sbjct: 158 ---------WCHRDPSLRKSGNGNIFVKNLDKNI---DNKALYDTFSLFGNILSCKVAVD 205
Query: 311 DYQHSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 349
D HS FV + ESA +A++ +G ++G + V P
Sbjct: 206 DNGHSKGYGFVHYENEESARSAIDKVNGMLIGGKTVYVGP 245
>gi|357473909|ref|XP_003607239.1| RNA-binding protein [Medicago truncatula]
gi|355508294|gb|AES89436.1| RNA-binding protein [Medicago truncatula]
Length = 635
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 10/182 (5%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+T++V ++ V + F CG+VVD R D + F VEF E A++AL +
Sbjct: 376 KTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSALEM 435
Query: 238 AGTMLGFYPVR--VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL- 294
G L VR + + A P N + R S+T++ DK + + +I+
Sbjct: 436 NGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGRGQ-SQTVFVRGFDKNLGEDEIRAK 494
Query: 295 ---FFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSP 349
F CGE R+ + D++ +S A+++F ++S AL + L + V
Sbjct: 495 LMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDFKDSDSFSKALELHESELDGYQLSVDE 554
Query: 350 SK 351
+K
Sbjct: 555 AK 556
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
S+T++ N+ V + DI+ FF+ CGEV +R D + + VEFA AE+A +AL
Sbjct: 375 SKTLFVGNLSFSVQRSDIEKFFQD-CGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSAL 433
Query: 334 NCSGAVLGSLPIRV 347
+G L +R+
Sbjct: 434 EMNGQELLQRAVRL 447
>gi|9294322|dbj|BAB02219.1| unnamed protein product [Arabidopsis thaliana]
Length = 610
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 76/183 (41%), Gaps = 11/183 (6%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSL 237
+T++ ++ Q+ + F G+VVD R+ D S + +EF E A+ AL +
Sbjct: 358 KTLFAGNLSYQIARSDIENFFKEAGEVVDVRLSSFDDGSFKGYGHIEFASPEEAQKALEM 417
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G +L VR+ + P N + E + SRTIY + + +IK
Sbjct: 418 NGKLLLGRDVRLDLANERGTPRNSNPGRKGEGSQ---SRTIYVRGFSSSLGEDEIKKELR 474
Query: 298 S---VCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPV 354
S CGEV R+ + D + F + AL SG+ +G I V S
Sbjct: 475 SHFSKCGEVTRVHVPTDRETGASRGFAYIDLTSGFDEALQLSGSEIGGGNIHVEES---- 530
Query: 355 RPR 357
RPR
Sbjct: 531 RPR 533
>gi|213410431|ref|XP_002175985.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
gi|212004032|gb|EEB09692.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
Length = 540
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 20/200 (10%)
Query: 159 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGD 213
Q +RR + + + ++E RRTV+V+ + ++T +L F G Q+V R+ G
Sbjct: 199 QSRRRES--SPHYSEEERDRRTVFVTQLANRLTTHELREFFEQAGAVRDAQIVRDRVTGR 256
Query: 214 PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 273
V A+VEF E+ + AL+L+G + PV V + A N SE R +
Sbjct: 257 SKGV---AYVEFRREDSVQVALTLSGKRILGIPVIV---QLTEAEKNRKARELSEQNRAL 310
Query: 274 CSRTIY---CT-NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAES 328
+ + C NI +T D+K FE GE++ +RL D Q+ ++ F++F
Sbjct: 311 SAELPFHRLCVGNIHFNITDEDLKAIFEPF-GELEYVRLQRDDQNRSKGFGFIQFRDPLC 369
Query: 329 A-IAALNCSGAVLGSLPIRV 347
A IA +G L +RV
Sbjct: 370 ARIALEKMNGFDLAGRQLRV 389
>gi|356576979|ref|XP_003556607.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Glycine max]
Length = 248
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 12/200 (6%)
Query: 155 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 214
N Y + +R+ + ++ +T+YV ++ +V + + LF CG++VD R+ +
Sbjct: 42 NSYWESSKRV----ATLKEQNAPPKTIYVRNLSYRVEQADMENLFKECGKIVDVRLHRNH 97
Query: 215 NSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRSEDERE 272
N L F VEF E A+ AL L T L P+ V L + + + S + E
Sbjct: 98 NGRLNGFGQVEFATAEAAKKALELHNTELLRRPIGVDLAEEKGEYTYSRSNWSNSFQKCE 157
Query: 273 MC-SRTIYCTNIDKKVTQGDIKLFFES---VCGEVQRLRL--LGDYQHSTRIAFVEFAMA 326
S T++ T D + +K E CGE+QR+ + D A + F
Sbjct: 158 RAQSPTVFVTGFDSSLPAEKLKASLEEHFGSCGEIQRISIPTFPDSGAVKGFAHLGFKDV 217
Query: 327 ESAIAALNCSGAVLGSLPIR 346
S AL+ LG P+R
Sbjct: 218 VSVRKALHLDQNELGGFPLR 237
>gi|348677689|gb|EGZ17506.1| hypothetical protein PHYSODRAFT_501188 [Phytophthora sojae]
Length = 293
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 24/202 (11%)
Query: 173 QDEVIRRT---VYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVE 224
++E+ R+T VYV I + E L T F +CG V + R+ G P +A V
Sbjct: 59 KEEIDRKTEATVYVEGIPYRANEGDLVTHFSSCGTVREVRMPRYQDSGKPRG---YAHVV 115
Query: 225 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAP--VNPTFLPRSEDEREMC---SRTIY 279
F DE + AL L G L R L + A AP V ++++ + RT++
Sbjct: 116 FDDEAALKKALKLDGQYLF---NRYLSIRRAEAPRAVEMALKEKNQNTTKKAVKGCRTVF 172
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI---AFVEFAMAESAIAALNCS 336
+ +V +G I+ S CG + +R L + H+ ++ +VEF+ + A+AA S
Sbjct: 173 IKQLPYEVEEGTIREALAS-CGTITSVR-LPIWNHTKKLKGFGYVEFSSEDEALAAARRS 230
Query: 337 GAVLGSLPIRVSPSKTPVRPRA 358
G +G + +S P+A
Sbjct: 231 GMKIGDRMVLISLDAAGSAPKA 252
>gi|255572397|ref|XP_002527136.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223533496|gb|EEF35238.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 642
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 85/186 (45%), Gaps = 12/186 (6%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+T++V ++ QV + F G+VVD R D + + F VEF E A AL L
Sbjct: 387 KTLFVGNLPFQVERADVEDFFKGAGEVVDVRFALDQDQRFKGFGHVEFATIEAAHEALKL 446
Query: 238 AGTMLGFYPVRV--LPSKTAIAPVNPTFLPRSEDEREMCSRT--IYCTNIDKKVTQGDIK 293
G L VR+ + AP P + ++ S+T I+ DK + + +I+
Sbjct: 447 NGQSLNGREVRLDLARERGERAPYTPYSGKDNSFQKGGRSQTQKIFVRGFDKFLGEDEIR 506
Query: 294 ----LFFESVCGEVQRLRLLGDYQHST--RIAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
F++ CGE+ R+ L DY+ +A+VEF A AL +G+ LG + V
Sbjct: 507 NSLGEHFKT-CGEITRISLPTDYETGAIKGMAYVEFQDATGFNKALEFNGSQLGDQYLTV 565
Query: 348 SPSKTP 353
+K P
Sbjct: 566 EEAKPP 571
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 20/193 (10%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 292
AL+ L F + VN P ++ + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNKRL-FLEKEIK--------VNWATSPGNQPKTDISSHHHIFVGDLSPEIETETL 111
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIR 346
+ F GE+ R++ D H+ + ++FV+ A AE+AI A+N S+
Sbjct: 112 REAFAPF-GEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAIQAMNRQWIASRSIRTN 169
Query: 347 VSPSKTPVRPRAP 359
S K P PR P
Sbjct: 170 WSTRKLP-PPREP 181
>gi|310798506|gb|EFQ33399.1| CC1-like family splicing factor [Glomerella graminicola M1.001]
Length = 565
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEF 225
T +DE RRTV+V + ++ L F G V + +I D S +VEF
Sbjct: 169 TPQLTEDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVTEAQIVKDRISQRSKGVGYVEF 228
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRSEDEREMCSR 276
+E+ AL L G L P+ V ++ T +P +P
Sbjct: 229 KNEDSVTQALQLTGQKLLGIPIIVQMTEAEKNRQVRTTETTAAHPNSIP---------FH 279
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-N 334
+Y NI VT+ D++ FE GE++ ++L D +R FV++ A A AL
Sbjct: 280 RLYVGNIHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQYREASQAREALEK 338
Query: 335 CSGAVLGSLPIRV 347
+G L PIRV
Sbjct: 339 MNGFDLAGRPIRV 351
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAA 234
+ ++YV D++ VT+ L LF GQVV R+C D + L + +V ++ + A A
Sbjct: 22 VTTSLYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAARA 81
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L ML F P+ P + + +P+ R+ S I+ N+DK + +
Sbjct: 82 LD----MLNFTPLNGSPIRIMYSHRDPSV-------RKSGSGNIFIKNLDKGIDHKALHD 130
Query: 295 FFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
F S G + ++ D S FV+F ESA A+ +G +L + V P
Sbjct: 131 TF-SAFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGP 186
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D + +++L LF G + C++ DPN + R + FV F T EE ++A + +
Sbjct: 308 LYIKNLDDSIGDDRLKQLFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASKALMEMN 367
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 368 GKMVVSKPLYV 378
>gi|345497985|ref|XP_001603213.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Nasonia vitripennis]
Length = 386
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 79/173 (45%), Gaps = 14/173 (8%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTD 227
NA ++ ++V D+ ++ + L F G++ DCR+ DP ++ + FV F
Sbjct: 51 NASVNKSEHYHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTMKSKGYGFVSFVK 110
Query: 228 EEGARAAL-SLAGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYC 280
+ A +A+ ++ G LG + R P+ + A P ++ + T+YC
Sbjct: 111 KAEAESAIGAMNGQWLGSRSIRTNWATRKPPAPKSEANTKPLTFDEVYNQSSPTNCTVYC 170
Query: 281 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 333
+ +T+ ++ F S G +Q +R+ D + AF+ F+ ESA A+
Sbjct: 171 GGLTNGLTEELMQKTF-SPFGSIQEIRVFKDKGY----AFIRFSTKESATHAI 218
>gi|260943169|ref|XP_002615883.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
gi|238851173|gb|EEQ40637.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
Length = 385
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 27/184 (14%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 233
E+ R+ +YV + + + E+ L F G V +I D N +AFVEF DE GA A
Sbjct: 40 EISRKVLYVGGLPKSINEDALNEKFSASGPVFSVKILNDKNKQGFNYAFVEFVDEAGAAA 99
Query: 234 AL------SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
AL S +ML K A + TF + + + I+ ++ +V
Sbjct: 100 ALQEFNGSSFENSML----------KINYAYQSSTF--NATQNSDDPTYNIFVGDLSPEV 147
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGS 342
+ FF S +++ ++ D Q S + F A AE+A++ +N G VL
Sbjct: 148 DDESLHKFF-SAFESLKQAHVMWDMQTSRSRGYGFVTFANLADAETALSTMN--GKVLNG 204
Query: 343 LPIR 346
IR
Sbjct: 205 RAIR 208
>gi|118785284|ref|XP_314526.3| AGAP010553-PA [Anopheles gambiae str. PEST]
gi|116128011|gb|EAA09944.4| AGAP010553-PA [Anopheles gambiae str. PEST]
Length = 643
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 10/179 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
VYV I ++ E+ + FL G + + DP + FAFVE+ EGA+ AL +
Sbjct: 162 VYVGSISFELKEDTIRAAFLPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 221
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G MLG ++V + + P + ++E + +R IY +I +T+ DIK FE
Sbjct: 222 NGAMLGGRNIKV--GRPSNMPQAQQVIDEIQEEAKSYNR-IYIASIHPDLTEEDIKSVFE 278
Query: 298 SVCGEVQRLRL-LGDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 353
+ G + ++ G+ H+ + F+E+ +SAI A+ LG +RV S TP
Sbjct: 279 AF-GPIMTCKMSQGNAVHTHKGYGFIEYQTNQSAIEAIASMNLFDLGGQLLRVGRSITP 336
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 24/199 (12%)
Query: 159 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NS 216
Q ++ S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 217 VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
L +A+V F D E R A+ L + P++ + + +P+ R+ S
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 277 TIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAI 330
I+ N+ + D K ++ SV G++ ++ D ++ + F E A+ AI
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAI 183
Query: 331 AALNCSGAVLGSLPIRVSP 349
ALN G +L I V+P
Sbjct: 184 DALN--GMLLNGQEIYVAP 200
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 24/199 (12%)
Query: 159 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NS 216
Q ++ S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 217 VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
L +A+V F D E R A+ L + P++ + + +P+ R+ S
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 277 TIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAI 330
I+ N+ + D K ++ SV G++ ++ D ++ + F E A+ AI
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAI 183
Query: 331 AALNCSGAVLGSLPIRVSP 349
ALN G +L I V+P
Sbjct: 184 DALN--GMLLNGQEIYVAP 200
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 24/199 (12%)
Query: 159 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NS 216
Q ++ S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 217 VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
L +A+V F D E R A+ L + P++ + + +P+ R+ S
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 277 TIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAI 330
I+ N+ + D K ++ SV G++ ++ D ++ + F E A+ AI
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAI 183
Query: 331 AALNCSGAVLGSLPIRVSP 349
ALN G +L I V+P
Sbjct: 184 DALN--GMLLNGQEIYVAP 200
>gi|328792887|ref|XP_624017.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Apis
mellifera]
Length = 367
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
++V D+ ++ + L F G++ DCR+ DP ++ + FV F + A +A+ ++
Sbjct: 57 IFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKKAEAESAIGAM 116
Query: 238 AGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
G LG + R P+ + A P ++ + T+YC + +T+
Sbjct: 117 NGQWLGSRSIRTNWATRKPPAPKSEANAKPLTFDEVYNQSSPTNCTVYCGGLTNGLTEEL 176
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 333
++ F S G +Q +R+ D + AF+ F+ ESA A+
Sbjct: 177 MQKTF-SPFGSIQEIRVFKDKGY----AFIRFSTKESATHAI 213
>gi|326432018|gb|EGD77588.1| hypothetical protein PTSG_08685 [Salpingoeca sp. ATCC 50818]
Length = 517
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 83/191 (43%), Gaps = 27/191 (14%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEF-TDEEGARAA 234
R + ++ + VTE L LF G + +I D + L + FVEF T EE ARA
Sbjct: 83 RNNLIINYLPPSVTESDLRELFKPFGTIKAIKIMTDRYTHKSLGYGFVEFETAEEAARAI 142
Query: 235 LSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
++ G ++V PS ++I N +Y N+ + +T+
Sbjct: 143 QAMNGRQYMNKRLKVSIARPSSSSITGAN-----------------LYIKNLPRTITEDQ 185
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 348
++ F GE+ RLL D IAFV F A AE A+A LN + S PI V
Sbjct: 186 LRAIFNPF-GEIISARLLYDGDVPKGIAFVRFDKRACAERAVAELNNTVPANCSQPIAVK 244
Query: 349 PSKTPVRPRAP 359
+ T R RAP
Sbjct: 245 FADTNRRSRAP 255
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 81/232 (34%), Gaps = 53/232 (22%)
Query: 155 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 214
NG +R+ + + +Y+ ++ + +TE+QL +F G+++ R+ D
Sbjct: 146 NGRQYMNKRLKVSIARPSSSSITGANLYIKNLPRTITEDQLRAIFNPFGEIISARLLYDG 205
Query: 215 NSVLRFAFVEFTDEEGARAALS-----------------------------------LAG 239
+ AFV F A A++ G
Sbjct: 206 DVPKGIAFVRFDKRACAERAVAELNNTVPANCSQPIAVKFADTNRRSRAPSGSSAGMHQG 265
Query: 240 TMLGFYPVRVLP---------SKTAIAPVNPTFLPRSEDEREMCSRT-----IYCTNIDK 285
+M+ YP +P + +AP+ P F+P S D +RT ++ N+
Sbjct: 266 SMMA-YPSMPMPYGGGFQQPQPQPTMAPLQPGFVPMSPDMLPPSARTPYGYCLFVFNLPP 324
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFV---EFAMAESAIAALN 334
+ + F + G V + R FV +F A +AI LN
Sbjct: 325 FMDEDGFARLFANFGGVVSASISRKSLSQARRYGFVTMRDFGEAATAIQNLN 376
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 24/199 (12%)
Query: 159 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NS 216
Q ++ S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 217 VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
L +A+V F D E R A+ L + P++ + + +P+ R+ S
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 277 TIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAI 330
I+ N+ + D K ++ SV G++ ++ D ++ + F E A+ AI
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAI 183
Query: 331 AALNCSGAVLGSLPIRVSP 349
ALN G +L I V+P
Sbjct: 184 DALN--GMLLNGQEIYVAP 200
>gi|449454730|ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 104/237 (43%), Gaps = 48/237 (20%)
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATL 198
+GTA NG R N S G++R QD+ T++V D+ VT+ L
Sbjct: 128 NGTAMPNGAQNFRL--NWASAGEKR---------QDDSPDYTIFVGDLAGDVTDYVLQET 176
Query: 199 F------LTCGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLP 251
F + +VV R+ G + FV+F DE E RA + G P+R+ P
Sbjct: 177 FRARYNSVKGAKVVIDRLTG---RTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGP 233
Query: 252 ------------SKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 299
SKT+ NP P +++E + + TI+ N+D VT ++ F S
Sbjct: 234 AANKNTSGSQQFSKTSYQ--NP---PGTQNENDPNNTTIFVGNLDSNVTDEHLRQVF-SQ 287
Query: 300 CGEVQRLRLLGDYQHSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVSPSKTP 353
GE+ +++ R FV+F + AE A+ LN G +G IR+S ++P
Sbjct: 288 YGELVHVKIPA----GKRCGFVQFSDRSCAEEALRILN--GTPIGGQNIRLSWGRSP 338
>gi|401625965|gb|EJS43937.1| pab1p [Saccharomyces arboricola H-6]
Length = 577
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 24/199 (12%)
Query: 159 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NS 216
Q ++ S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPTVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 217 VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
L +A+V F D E R A+ L + P++ + + +P+ R+ S
Sbjct: 78 SLGYAYVNFNDHEAGRKAID----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 277 TIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAI 330
I+ N+ + D K ++ SV G++ ++ D ++ + F E A+ AI
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAI 183
Query: 331 AALNCSGAVLGSLPIRVSP 349
ALN G +L I V+P
Sbjct: 184 DALN--GMLLNGQEIYVAP 200
>gi|357625522|gb|EHJ75940.1| hypothetical protein KGM_20346 [Danaus plexippus]
Length = 245
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 83/181 (45%), Gaps = 15/181 (8%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 237
++V D+ ++ + L F G++ DCR+ DP ++ + FV F + A +A++ +
Sbjct: 56 IFVGDLSPEIETQNLRDAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKSEAESAITAM 115
Query: 238 AGTMLGFYPVRV-LPSKTAIAPVN-----PTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
G LG +R ++ AP N P ++ + T+YC + +T+
Sbjct: 116 NGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVYNQSSPTNCTVYCGGLTAGLTEEL 175
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSPS 350
++ F+ G +Q +R+ D + AF+ F+ ESA A+ A + P++ S
Sbjct: 176 MQKTFQPF-GTIQEIRVFKDKGY----AFIRFSTKESATHAIVAVHNADVNGAPVKCSWG 230
Query: 351 K 351
K
Sbjct: 231 K 231
>gi|342879464|gb|EGU80711.1| hypothetical protein FOXB_08751 [Fusarium oxysporum Fo5176]
Length = 794
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 24/181 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+ V++ ++D + + L F G ++ C++ D N + +
Sbjct: 130 CRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 189
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE ++A + G +L V V +P K R EM +
Sbjct: 190 GFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 238
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
+Y NI VT+ D + FE G+V L D + +R FV F ESA A+
Sbjct: 239 FTNVYVKNIAPDVTEDDFRELFEKF-GDVTSSSLARDQEGKSRGFGFVNFTTHESASKAV 297
Query: 334 N 334
+
Sbjct: 298 D 298
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + +G +A
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATADGEKALEE 119
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 120 LNYTLIKGRPCRIMWSQ------------RDPALRKNGQGNVFIKNLDVAIDNKALHDTF 167
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D +++ FV + E+A A+ +L
Sbjct: 168 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGML 211
>gi|41581275|emb|CAE47924.1| oligouridylate binding protein, putative [Aspergillus fumigatus]
Length = 485
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 231
E +R +YV +D +VTE+ L +F T G V +I D N + FVEF D A
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAA 146
Query: 232 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 289
RA +L G + +R VN + S ++ + S I+ ++ +V
Sbjct: 147 ERAMQTLNGRRIHQSEIR----------VNWAYQSNSANKEDTSSHFHIFVGDLSNEVND 196
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 344
+I L S G V R++ D + +AF E A AE A+ A++ G LGS
Sbjct: 197 -EILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMD--GEWLGSRA 253
Query: 345 IR 346
IR
Sbjct: 254 IR 255
>gi|119495558|ref|XP_001264561.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
gi|119412723|gb|EAW22664.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
Length = 477
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 231
E +R +YV +D +VTE+ L +F T G V +I D N + FVEF D A
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFNSKGYNYGFVEFDDPGAA 146
Query: 232 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 289
RA +L G + +R VN + S ++ + S I+ ++ +V
Sbjct: 147 ERAMQTLNGRRIHQSEIR----------VNWAYQSNSTNKEDTSSHFHIFVGDLSNEVND 196
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 344
+I L S G V R++ D + +AF E A AE A+ A++ G LGS
Sbjct: 197 -EILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMD--GEWLGSRA 253
Query: 345 IR 346
IR
Sbjct: 254 IR 255
>gi|393218535|gb|EJD04023.1| hypothetical protein FOMMEDRAFT_133373 [Fomitiporia mediterranea
MF3/22]
Length = 422
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 90/206 (43%), Gaps = 28/206 (13%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFT 226
S A++D V+V D+ +V + LA F G + D R+ D NS + F+ F
Sbjct: 94 STAKEDTSGHFHVFVGDLSPEVNDAVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFR 153
Query: 227 DEEGARAAL-SLAGTMLGFYPVRV-----------LPSKT----AIAPVNPTFLPRSED- 269
D+ A A+ ++ G LG +RV P T A AP+N P S +
Sbjct: 154 DKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPAPRPTGAGGAPAPINFQGGPLSYET 213
Query: 270 ---EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMA 326
+ + T+Y N+ TQ D+ F+S+ G + +R+ D AFV+
Sbjct: 214 VVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQAD----RGFAFVKLDTH 268
Query: 327 E-SAIAALNCSGAVLGSLPIRVSPSK 351
E +A+A + G ++ PI+ S K
Sbjct: 269 ENAAMAIVQLQGQMVHGRPIKCSWGK 294
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 82/195 (42%), Gaps = 25/195 (12%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGARAA 234
R +YV ++ +VTE L +F G V +I D N L + FVE+ D A A
Sbjct: 12 RAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETA 71
Query: 235 L-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L +L G + +R VN + + E ++ ++ +V +
Sbjct: 72 LQTLNGRKIFDTEIR----------VNWAYQGSTAKEDTSGHFHVFVGDLSPEVNDAVLA 121
Query: 294 LFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIRVS 348
F S G + R++ D +AF + AE AIA +N G LGS IRV+
Sbjct: 122 KAF-SAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMN--GEWLGSRAIRVN 178
Query: 349 PS--KTPVRPRAPRP 361
+ KT P APRP
Sbjct: 179 WANQKTQGAP-APRP 192
>gi|323355343|gb|EGA87168.1| Pab1p [Saccharomyces cerevisiae VL3]
Length = 563
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 24/199 (12%)
Query: 159 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NS 216
Q ++ S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 217 VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
L +A+V F D E R A+ L + P++ + + +P+ R+ S
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 277 TIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAI 330
I+ N+ + D K ++ SV G++ ++ D ++ + F E A+ AI
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAI 183
Query: 331 AALNCSGAVLGSLPIRVSP 349
ALN G +L I V+P
Sbjct: 184 DALN--GMLLNGQEIYVAP 200
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 17/198 (8%)
Query: 161 KRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGD 213
++R+ +T Q +DE RRTV+V + ++ ++L F G Q+V R+ G
Sbjct: 149 RKRVKSKTPEPQLTEDERDRRTVFVQQLAARLRTKELIQFFEKAGPVKEAQIVKDRVSGR 208
Query: 214 PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDER 271
V +VEF +EE A+ + G L P+ ++ ++ NP +
Sbjct: 209 SKGV---GYVEFKNEESVPLAIQMTGQKLLGIPIIAQLTEAEKNRQARNPE--ASTSHHN 263
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAI 330
+ +Y NI +T+ D++ FE GE++ ++L D +R FV+F A
Sbjct: 264 SVPFHRLYVGNIHFSITEQDLQNVFEPF-GELEFVQLQKDETGRSRGYGFVQFRDPNQAR 322
Query: 331 AAL-NCSGAVLGSLPIRV 347
AL +G L PIRV
Sbjct: 323 EALEKMNGFDLAGRPIRV 340
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 18/180 (10%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEF-TDEEGA 231
+ + ++YV D+D V + QL LF GQVV R+C D ++ L + +V + E
Sbjct: 36 QFVSTSLYVGDLDLSVNDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNYNAAHEAT 95
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
RA L T L P+R++ S +PT R+ + I+ N+DK +
Sbjct: 96 RALDELNFTPLNGKPIRIMYSYR-----DPTI-------RKSGAGNIFIKNLDKSIDNKA 143
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 349
+ F S G + ++ D +R FV+F ESA +A++ +G +L + V P
Sbjct: 144 LHDTF-STFGNILSCKVATDSLGQSRGYGFVQFDNEESAKSAIDKLNGMLLNDKQVFVGP 202
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+YV ++D +++++L LF G + C++ DPN + R + FV F T EE ++A +
Sbjct: 324 LYVKNLDDSISDDKLKELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASKALTEMN 383
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 384 GKMVVSKPLYV 394
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 86/209 (41%), Gaps = 30/209 (14%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSLA 238
VYV ++ + TE+ L +F G + + D + + F FV F D ++ AR+ +L
Sbjct: 221 VYVKNLSETTTEDDLKKIFGEFGIITSTAVMRDADGKSKCFGFVNFDDPDDAARSVEALN 280
Query: 239 GTMLG---FYPVRVLPSKTAIAPVNPTF---LPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
G +Y + + F L + D+ E + +Y N+D ++ +
Sbjct: 281 GKKFDDKEWYVGKAQKKYEREMELKGKFEQSLKETADKFEGLN--LYVKNLDDSISDDKL 338
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRV--- 347
K F S G + +++ D +R FV F+ AE A AL +G ++ S P+ V
Sbjct: 339 KELF-SEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASKALTEMNGKMVVSKPLYVALA 397
Query: 348 --------------SPSKTPVRPRAPRPP 362
S + PV PR P P
Sbjct: 398 QRKEERRARLQAQFSQMRPPVGPRMPMYP 426
>gi|320580160|gb|EFW94383.1| Splicing factor [Ogataea parapolymorpha DL-1]
Length = 295
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 23/179 (12%)
Query: 179 RTVYVSDID-QQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-----FAFVEFTDEEGAR 232
R VYVSD+D +V E++L+ +F G + RI + + FAF+ F A
Sbjct: 116 RQVYVSDLDFYKVDEDKLSEIFSKYGDIEMIRIPVRRDEKSKKLNNGFAFISFRSSSDAV 175
Query: 233 AALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 289
+L L G +L P+++ P K ++ + R+ RTI N+D K+
Sbjct: 176 KSLELDGKLLAGRPMKIELATPKKKKVSVLGTGKFDRA--------RTISVLNVDDKINT 227
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESA-IAALNCSGAVLGSLPIRV 347
+K FE + G V ++ L Q A +EF S+ +A +G +G +R+
Sbjct: 228 ETLKAIFEEI-GPVTQIEL----QPENNAALIEFETVRSSGMADFKFNGRKIGDTTVRI 281
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 88/193 (45%), Gaps = 30/193 (15%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SL 237
T++V++ + T E L +F G V+ R+ +V R F +VE++ E+ A +A+ +L
Sbjct: 22 TLWVANYPPEKTAEDLKKIFGQHGGVLAVRLPSLKTNVQRRFCYVEYSSEQDAASAVKAL 81
Query: 238 AGTML----GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC---SRTIYCTNID-KKVTQ 289
G + G + + V S P + ER+ R +Y +++D KV +
Sbjct: 82 DGHTIHGKTGDFKLTVKISN-----------PEARQERKGALEEGRQVYVSDLDFYKVDE 130
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 344
+ F S G+++ +R+ ++ AF+ F + A+ +L G +L P
Sbjct: 131 DKLSEIF-SKYGDIEMIRIPVRRDEKSKKLNNGFAFISFRSSSDAVKSLELDGKLLAGRP 189
Query: 345 IRV---SPSKTPV 354
+++ +P K V
Sbjct: 190 MKIELATPKKKKV 202
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 16/204 (7%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG----DPNSVLRFAFV 223
TSN + T+YV ++DQ+VT+ L +F T GQVV +I + + + FV
Sbjct: 7 TSNVAETTNPATTIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFV 66
Query: 224 EFTDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTN 282
EF D A A+ + G + Y +R ++ + A +NP ED ++ +
Sbjct: 67 EFADPRVAEQAIQDMNGRKIFNYEIRANWAQPS-ANINPPLQMTKEDTTNHFH--VFVGD 123
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTR----IAFVEFAMAESAIAALNCSG 337
+ ++ + F S G + ++ D +R +AF + AE AIA +N G
Sbjct: 124 LAAEINDEKLAQAF-SEFGTMSEAHVMWDPLSGKSRGFGFVAFRDKTDAERAIATMN--G 180
Query: 338 AVLGSLPIRVSPSKTPVRPRAPRP 361
LG+ PIR + + + P P
Sbjct: 181 EWLGTRPIRCNWATQKGQTAMPAP 204
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 15/190 (7%)
Query: 154 RNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD 213
R ++Q +N ++D V+V D+ ++ +E+LA F G + + + D
Sbjct: 92 RANWAQPSANINPPLQMTKEDTTNHFHVFVGDLAAEINDEKLAQAFSEFGTMSEAHVMWD 151
Query: 214 PNSVLR--FAFVEFTDEEGA-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE 270
P S F FV F D+ A RA ++ G LG P+R + P P +
Sbjct: 152 PLSGKSRGFGFVAFRDKTDAERAIATMNGEWLGTRPIRCNWATQKGQTAMPAPQPGQQLP 211
Query: 271 REMCSR-------TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
E+ + +IY NI V+Q D+ F+ G VQ ++ +Q AFV+
Sbjct: 212 YEVVVQQTPAYVTSIYVGNIPLNVSQNDLVQPFQR-FGYVQEVK----FQADRGFAFVKM 266
Query: 324 AMAESAIAAL 333
E+A A+
Sbjct: 267 DTHENAANAI 276
>gi|301095902|ref|XP_002897050.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108479|gb|EEY66531.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 286
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 24/192 (12%)
Query: 173 QDEVIRRT---VYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVE 224
+DE+ R+T VYV I + +E + T F +CG V + R+ G P +A V
Sbjct: 53 KDEIDRKTEATVYVEGIPYKASEGDIVTHFSSCGTVREVRMPRYQDSGKPRG---YAHVV 109
Query: 225 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAP--VNPTFLPRSEDEREMC---SRTIY 279
F DE AL L G L R L + A AP V ++++ + RT+Y
Sbjct: 110 FDDEAALEKALELDGQYLFN---RYLSIRRAEAPRAVEMALKEKTQNATKKAVKGCRTVY 166
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI---AFVEFAMAESAIAALNCS 336
+ +V + I+ S CG + +R L + H+ ++ +VEF+ + A+AA S
Sbjct: 167 IKQLPYEVEEDTIRQALAS-CGTITSVR-LPIWNHTKKLKGFGYVEFSSEDEALAAARRS 224
Query: 337 GAVLGSLPIRVS 348
G +G + +S
Sbjct: 225 GMKIGDRMVLIS 236
>gi|403216743|emb|CCK71239.1| hypothetical protein KNAG_0G01810 [Kazachstania naganishii CBS
8797]
Length = 596
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 27/196 (13%)
Query: 168 TSNAQQ---DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAF 222
+S +QQ ++V ++YV ++D V+E L LF G V R+C D + L +A+
Sbjct: 33 SSESQQAGDNDVTSTSLYVGELDPSVSEALLYDLFSPIGSVASIRVCRDAITKTSLGYAY 92
Query: 223 VEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTN 282
V F+D E + A+ L + P++ + + +P+ R+ I+ N
Sbjct: 93 VNFSDHEAGKQAIE----KLNYTPIKGKLCRIMWSQRDPSL-------RKKGHGNIFIKN 141
Query: 283 IDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAALNCS 336
+++ + D K F+ SV G + ++ D ++ + F E + A AI ALN
Sbjct: 142 LNQDI---DNKALFDTFSVFGNILSSKIATDETGKSKGFGFVHFEEESAANEAIDALN-- 196
Query: 337 GAVLGSLPIRVSPSKT 352
G +L I V+P T
Sbjct: 197 GMLLNGQEIYVAPHLT 212
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 13/207 (6%)
Query: 149 TTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 208
T R R + +G + R +E RTV+ + Q++ L F + G+V D
Sbjct: 118 TLPRARPPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEDFFSSVGKVQDV 177
Query: 209 RI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTF 263
R+ C A+VEF D E AL L+G L P+ V + K + P
Sbjct: 178 RLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNL 237
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFV 321
+P+ + +Y ++ +T+ ++ FE G++ ++L+ D + S F+
Sbjct: 238 MPKGQT----GPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFL 292
Query: 322 EFAMAESAIAAL-NCSGAVLGSLPIRV 347
F A+ A AL +G L P++V
Sbjct: 293 TFRNADDAKKALEQLNGFELAGRPMKV 319
>gi|332374002|gb|AEE62142.1| unknown [Dendroctonus ponderosae]
Length = 634
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D N + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQDENGTSKGY 141
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIEKVNGML-------LNGKKVYVG---RFIPRKEREKELGEKAKLF 191
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLG-DYQHSTRIAFVEF---AMAESAIA 331
+Y N + +++ ++ FE G++ +++ D S FV F AE+A+
Sbjct: 192 TNVYVKNFGEDLSEEQLRNMFEKF-GKITSYKVMSKDDGKSKGFGFVAFESPEAAETAVD 250
Query: 332 ALNCSGAVLGSLPIRV 347
ALN V G P+ V
Sbjct: 251 ALNGKELVEGK-PLYV 265
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 21/156 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDITEAMLFDKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ ++ P+R++ S+ R R+ ++ N+D+ + D K +
Sbjct: 72 MNFDLIRGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDRSI---DNKAMY 116
Query: 297 E--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 329
+ S G + ++ D +++ FV F E+A
Sbjct: 117 DTFSAFGNILSCKVAQDENGTSKGYGFVHFETEEAA 152
>gi|15229678|ref|NP_188491.1| nucleolin [Arabidopsis thaliana]
gi|122225307|sp|Q1PEP5.1|NUCL2_ARATH RecName: Full=Nucleolin 2; AltName: Full=Protein NUCLEOLIN LIKE 2;
Short=AtNUC-L2; AltName: Full=Protein PARALLEL LIKE 1;
Short=AtPARLL1
gi|91806437|gb|ABE65946.1| nucleolin [Arabidopsis thaliana]
gi|332642601|gb|AEE76122.1| nucleolin [Arabidopsis thaliana]
Length = 636
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 76/183 (41%), Gaps = 11/183 (6%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSL 237
+T++ ++ Q+ + F G+VVD R+ D S + +EF E A+ AL +
Sbjct: 384 KTLFAGNLSYQIARSDIENFFKEAGEVVDVRLSSFDDGSFKGYGHIEFASPEEAQKALEM 443
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G +L VR+ + P N + E + SRTIY + + +IK
Sbjct: 444 NGKLLLGRDVRLDLANERGTPRNSNPGRKGEGSQ---SRTIYVRGFSSSLGEDEIKKELR 500
Query: 298 S---VCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPV 354
S CGEV R+ + D + F + AL SG+ +G I V S
Sbjct: 501 SHFSKCGEVTRVHVPTDRETGASRGFAYIDLTSGFDEALQLSGSEIGGGNIHVEES---- 556
Query: 355 RPR 357
RPR
Sbjct: 557 RPR 559
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 24/196 (12%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGAR 232
+DE RT+YV ++ +QVTE+ + LF G C++ + + FVEF D A
Sbjct: 108 EDESRPRTLYVGNLSRQVTEQLILQLFGAIGPCKSCKMISEHAGNDPYCFVEFYDHNHAS 167
Query: 233 AALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
AAL+ + G + V+ VN P + ++ ++ ++ D
Sbjct: 168 AALTAMNGRKIMHKEVK----------VNWATTPSGNKKDTSNHHHVFVGDLSPEIDTTD 217
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 346
+K F G++ R++ D Q + ++FV AE+AI A+ SG LG IR
Sbjct: 218 LKAAFAPF-GKISDARVVRDAQTAKSRGYGFVSFVNKVDAENAIGAM--SGQWLGGRAIR 274
Query: 347 VSPSKTPVRPRAPRPP 362
+ + R P PP
Sbjct: 275 TNWAT-----RKPPPP 285
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 21/180 (11%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFT 226
S ++D V+V D+ ++ L F G++ D R+ D + + FV F
Sbjct: 192 SGNKKDTSNHHHVFVGDLSPEIDTTDLKAAFAPFGKISDARVVRDAQTAKSRGYGFVSFV 251
Query: 227 DEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM-----------C 274
++ A A+ +++G LG +R T A P +E ++++
Sbjct: 252 NKVDAENAIGAMSGQWLGGRAIR-----TNWATRKPPPPKSNEGQKQLSYDEVLCQASPT 306
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN 334
+ T+YC I K +T+ ++ F + G +Q +R+ + +S I F +A AI +N
Sbjct: 307 NTTVYCGGITKGLTEDLMRNTFSNF-GPIQEIRVFPEKGYSF-IRFFSHEVAAMAIVTVN 364
>gi|391332510|ref|XP_003740677.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 341
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 24/172 (13%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
++V D+ V +QL F G++ DCR+ DP + + FV F ++ A A+ ++
Sbjct: 50 IFVGDLSSDVETQQLREAFTPFGEISDCRVVRDPQTQKSKGYGFVSFLRKQDAETAINAM 109
Query: 238 AGTMLGFYPVRV-LPSKTAIAPVN-----------PTFLPRSEDE----REMCSRTIYCT 281
G LG +R ++ + N P + P + DE + T+YC
Sbjct: 110 NGQWLGGRVIRTNWATRRPASNANNQQEGSQGNSTPKYTPLTFDEVYNQASPTNCTVYCG 169
Query: 282 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 333
+ + +++ I+ F S G +Q +R+ D + AFV FA ESA A+
Sbjct: 170 GLGQGLSEELIQKTFSSY-GIIQEIRVFKDKGY----AFVRFATKESATHAI 216
>gi|125524053|gb|EAY72167.1| hypothetical protein OsI_00016 [Oryza sativa Indica Group]
Length = 920
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 227
T + +V+++ V +S++ +T + + LF CG+VVDC I + A+VE++
Sbjct: 289 TDKTDKGDVLKKMVQISNLSPLLTVDHIKQLFGYCGKVVDCTITDSKH----IAYVEYSK 344
Query: 228 EEGARAALSLAGTMLGFYPVRV-----LPSKTAIAPVN 260
+E A AAL+L +G P+ V LP KT +A N
Sbjct: 345 QEEATAALALNNMDVGGRPLNVEMAKSLPPKTNLANSN 382
>gi|429860108|gb|ELA34858.1| RNA splicing factor (pad-1) [Colletotrichum gloeosporioides Nara
gc5]
Length = 628
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 26/195 (13%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEF 225
T +DE RRTV+V + ++ L F G V + +I D S +VEF
Sbjct: 174 TPQLTEDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVNEAQIVKDRISQRSKGVGYVEF 233
Query: 226 TDEEGARAALSLAGTMLGFYPV-----------RVLPSKTAIAPVNPTFLPRSEDEREMC 274
+EE AL L G L P+ +V S+TA +P +P
Sbjct: 234 KNEESVTQALQLTGQKLLGIPIIVQLTEAEKNRQVRNSETATG-AHPNSIP--------- 283
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
+Y NI VT+ D++ FE GE++ ++L D +R FV++ A A AL
Sbjct: 284 FHRLYVGNIHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQYREASQAREAL 342
Query: 334 -NCSGAVLGSLPIRV 347
+G L PIRV
Sbjct: 343 EKMNGFDLAGRPIRV 357
>gi|170044609|ref|XP_001849934.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
gi|167867688|gb|EDS31071.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
Length = 628
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 22/187 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + +
Sbjct: 73 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDEKGNSKGY 132
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML L +K F+PR E E+E+ +
Sbjct: 133 GFVHFETEESANTSIEKVNGML-------LNAKKVFVG---RFIPRKEREKELGEKAKLF 182
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESA-IAALN 334
+Y N ++T +K FE G + R++ S FV F ESA +A
Sbjct: 183 TNVYVKNFGDELTDESLKEMFEK-YGTITSHRVMIKENKSRGFGFVAFENPESAEVAVQE 241
Query: 335 CSGAVLG 341
+G LG
Sbjct: 242 LNGKELG 248
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 14/178 (7%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL-SLAG 239
VYV + ++T+E L +F G + R+ N F FV F + E A A+ L G
Sbjct: 185 VYVKNFGDELTDESLKEMFEKYGTITSHRVMIKENKSRGFGFVAFENPESAEVAVQELNG 244
Query: 240 TMLG----FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR----TIYCTNIDKKVTQGD 291
LG Y R + F + + E +R +Y N+D +
Sbjct: 245 KELGDGKVLYVGRAQKKNERQMELKRRF---EQLKMERLTRYQGVNLYVKNLDDSIDDER 301
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 348
++ F S G + +++ + S FV F+ AE A A+ +G ++GS P+ V+
Sbjct: 302 LRKEF-SPFGTITSAKVMLEEGRSKGFGFVCFSAAEEATKAVTEMNGRIVGSKPLYVA 358
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 21/167 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 3 SLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ ++ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 63 MNFDLIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 107
Query: 297 E--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
+ S G + ++ D + +++ FV F ESA ++ +L
Sbjct: 108 DTFSAFGNILSCKVAQDEKGNSKGYGFVHFETEESANTSIEKVNGML 154
>gi|358386241|gb|EHK23837.1| hypothetical protein TRIVIDRAFT_169516 [Trichoderma virens Gv29-8]
Length = 747
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 24/180 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 130 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 189
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 190 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKAN 238
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
+Y NI VT + + FE G+V L D + R FV F E+A A+
Sbjct: 239 FTNVYVKNIGPDVTDDEFRELFEKF-GDVTSSSLARDQEGKPRGFGFVNFTTHEAAFKAV 297
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 18/173 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + + +G +A
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEE 119
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 120 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDVAIDNKALHDTF 167
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
+ G + ++ D +++ FV + E+A A+ + +G +L + V
Sbjct: 168 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYV 219
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 9/174 (5%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEF 225
T + +E + TV+V ++ V EE LA F CG V RI D + F +V F
Sbjct: 172 TKKPKTEEPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTF 231
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
+ AA++L GT L +RV S T P + R E + + T++ N+
Sbjct: 232 ESADALTAAMALTGTELDGREIRVDVS-TPKPPRDGNRQGRKEAPQSAPTTTLFLGNLSF 290
Query: 286 KVTQGDIKLFFESVCGEVQRLRL-----LGDYQHSTRIAFVEFAMAESAIAALN 334
VT+ +I+ F S G++ +R G ++ + + + A+ A+ LN
Sbjct: 291 NVTEDEIRESF-SQYGQLVSVRFPTDRDTGAFKGFGYVEYGDVETAQKAVEGLN 343
>gi|221058957|ref|XP_002260124.1| splicing factor [Plasmodium knowlesi strain H]
gi|193810197|emb|CAQ41391.1| splicing factor, putative [Plasmodium knowlesi strain H]
Length = 970
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFV 321
L + ++E + T+ N+D K + DI FF V G+V+ ++ + D + S +A+V
Sbjct: 581 LQKEQEEAKRDDLTVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYV 640
Query: 322 EFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
EF E+ + AL+ +G +L + PI++ S+ + RA + H
Sbjct: 641 EFYTQEAVVKALSANGYMLKNRPIKIQSSQAE-KNRAAKAAKH 682
>gi|422292932|gb|EKU20233.1| splicing factor 3B subunit 4, partial [Nannochloropsis gaditana
CCMP526]
Length = 301
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
TVY +D++VTE+ L L G VV + D + + F FVEF EE A A+ +
Sbjct: 14 TVYCGGLDEKVTEDLLWELMQNVGPVVHVHMPRDKVTGMHQCFGFVEFRSEEDADYAVKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y P+RV + S+D + + ++ N+ +V + D+
Sbjct: 74 M-NMVRMYGKPLRVNKA--------------SQDRKTVDVGANLFIGNLAAEVDEKDLYD 118
Query: 295 FFESVCGEVQRLRLL--GDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRV 347
F + G Q +++ D H+ FV F E+A A+ C +GA LG PI V
Sbjct: 119 TFSAFGGITQPPKVMFDPDTGHTKGFGFVSFDSFEAADYAIECMNGAYLGGRPICV 174
>gi|115433970|ref|NP_001041743.1| Os01g0101600 [Oryza sativa Japonica Group]
gi|52076599|dbj|BAD45501.1| nuclear protein -like [Oryza sativa Japonica Group]
gi|113531274|dbj|BAF03657.1| Os01g0101600 [Oryza sativa Japonica Group]
gi|125568671|gb|EAZ10186.1| hypothetical protein OsJ_00013 [Oryza sativa Japonica Group]
gi|215712245|dbj|BAG94372.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768572|dbj|BAH00801.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 978
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 227
T + +V+++ V +S++ +T + + LF CG+VVDC I + A+VE++
Sbjct: 347 TDKTDKGDVLKKMVQISNLSPLLTVDHIKQLFGYCGKVVDCTITDSKH----IAYVEYSK 402
Query: 228 EEGARAALSLAGTMLGFYPVRV-----LPSKTAIAPVN 260
+E A AAL+L +G P+ V LP KT +A N
Sbjct: 403 QEEATAALALNNMDVGGRPLNVEMAKSLPPKTNLANSN 440
>gi|407920118|gb|EKG13336.1| hypothetical protein MPH_09618 [Macrophomina phaseolina MS6]
Length = 768
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 21/180 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 128 CRIMWSQRDPALRKTGQGNVFIKNLDGAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 187
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + E A A+ ++ G +L V V +P K ++ +E +
Sbjct: 188 GFVHYETAEAANNAIKAVNGMLLNEKKVFVGHHIPKKDRMSKF---------EEMKANFT 238
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALN 334
+Y NID +VT + + FE G++ L D + S FV F ESA A++
Sbjct: 239 NVYVKNIDLEVTDDEFRELFEKY-GQITSASLAHDNETGKSRGFGFVNFVKHESAAKAVD 297
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + ++G +A
Sbjct: 58 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSDDGEKALEE 117
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 118 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDGAIDNKALHDTF 165
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D +++ FV + AE+A A+ +L
Sbjct: 166 -AAFGNILSCKVAQDENGNSKGYGFVHYETAEAANNAIKAVNGML 209
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 16/174 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D VT+ QL LF GQVV R+C D S L + +V + + + A AL +
Sbjct: 28 SLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALEV 87
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L F P+ P + + +PT R + I+ N+DK + + F
Sbjct: 88 ----LNFTPLHGKPIRIMYSNRDPTI-------RRSGNGNIFIKNLDKAIDHKALHDTF- 135
Query: 298 SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
S G + ++ D S FV++ E+A A+ +G +L + V P
Sbjct: 136 SAFGNILSCKVAVDSSGQSKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVYVGP 189
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTD-EEGARAALSLA 238
+Y+ ++D +++E+L LF G + C++ DP+ V + + FV F++ EE +RA +
Sbjct: 311 LYIKNLDDSISDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEMN 370
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 371 GKMVVSKPLYV 381
>gi|303314025|ref|XP_003067021.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106689|gb|EER24876.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320039295|gb|EFW21229.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides posadasii str. Silveira]
Length = 483
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 21/180 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 232
E +R +YV +D +VTE+ L +F T G V +I D NS L + FVE+ D A R
Sbjct: 88 EPNKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAER 147
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 291
A +L G + +R VN + + ++ + + I+ ++ +V +
Sbjct: 148 AMQTLNGRRVHQSEIR----------VNWAYQSNNANKEDTSNHFHIFVGDLSNEVND-E 196
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 346
+ L S G V R++ D + +AF E A AE A+++++ G LGS IR
Sbjct: 197 VLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMD--GEWLGSRAIR 254
>gi|255940906|ref|XP_002561222.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585845|emb|CAP93573.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 734
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 16/176 (9%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 116 CRIMWSQRDPALRKTGQGNVFIKNLDNAIDNKALHDTFAAFGNILSCKVAQDEFANSKGY 175
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 278
FV + E A A+ ML L K + + R EM + I
Sbjct: 176 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNI 228
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
Y NID ++T + + FE+ GE+ L D +R FV +A ESA AA+
Sbjct: 229 YIKNIDLEITDDEFRTMFEAF-GEITSATLSHDQDGKSRGFGFVNYANHESAEAAV 283
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 46 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 105
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 106 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDNAIDNKALHDTF 153
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 154 -AAFGNILSCKVAQDEFANSKGYGFVHYETAEAANNAIKHVNGML 197
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 27/129 (20%)
Query: 122 FFGPNGFGYT--------NNFIMHTDGTANTN-----GHTTTRRKRNGYSQGKRRMNCRT 168
F G+G+ NN I H +G + GH +++ R + M
Sbjct: 169 FANSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFE---EMKANF 225
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD 227
+N +Y+ +ID ++T+++ T+F G++ + D + R F FV + +
Sbjct: 226 TN----------IYIKNIDLEITDDEFRTMFEAFGEITSATLSHDQDGKSRGFGFVNYAN 275
Query: 228 EEGARAALS 236
E A AA++
Sbjct: 276 HESAEAAVA 284
>gi|15128444|dbj|BAB62628.1| P0402A09.11 [Oryza sativa Japonica Group]
gi|20804433|dbj|BAB92130.1| P0455C04.5 [Oryza sativa Japonica Group]
Length = 990
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 227
T + +V+++ V +S++ +T + + LF CG+VVDC I + A+VE++
Sbjct: 359 TDKTDKGDVLKKMVQISNLSPLLTVDHIKQLFGYCGKVVDCTITDSKH----IAYVEYSK 414
Query: 228 EEGARAALSLAGTMLGFYPVRV-----LPSKTAIAPVN 260
+E A AAL+L +G P+ V LP KT +A N
Sbjct: 415 QEEATAALALNNMDVGGRPLNVEMAKSLPPKTNLANSN 452
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 231
D+ R + ++ + Q +TE +L +F+T G V +C+I D F FV + + A
Sbjct: 22 DDSSRTNLIINYLPQNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFVNYQKADDA 81
Query: 232 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
RA +L G + ++V ++ P ED +E +Y TN+ + VT+
Sbjct: 82 IRAIQTLNGLQIQNKRIKVSYAR-----------PPGEDRKET---NLYVTNLPRDVTED 127
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHST--RIAFVEFAMAESAIAAL 333
++ F S G + ++ LL D +AFV F E A+AA+
Sbjct: 128 ELTNIF-SAHGNIVQMNLLKDKITGMPRGVAFVRFDKREEALAAI 171
>gi|297806757|ref|XP_002871262.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317099|gb|EFH47521.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 897
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 17/181 (9%)
Query: 156 GYSQGKRRMNCR-TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 214
G GKR N Q E++ R ++V ++D + + +L LF G + D G
Sbjct: 184 GQRDGKRGSNVSIVGEYPQGEILSRILFVRNVDSIIEDCELRVLFKQYGDIRDLHTAG-- 241
Query: 215 NSVLRFAFVEFTDEEGAR-AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 273
+ F V + D A+ AA +L G +L R L + +I NP E+ E
Sbjct: 242 -KIRGFIMVSYYDIRSAQNAARALHGRLLR---GRKLDIRYSIPKENPK-----ENSSEG 292
Query: 274 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 333
++ N+D ++ ++ F S CGE++ +R I F + AE A+ L
Sbjct: 293 A---LWVNNLDSSISNEELHRIFSS-CGEIREVRRTMHENSQVYIEFFDVRKAEVALQGL 348
Query: 334 N 334
N
Sbjct: 349 N 349
>gi|225543108|ref|NP_001139415.1| sex lethal [Tribolium castaneum]
Length = 218
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 21/193 (10%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEG 230
Q E + + V+ I Q TEE LA +F G+V +I D N+ F FV++ +EE
Sbjct: 21 QVECDKSKLIVNYIPQFATEEDLALIFTPIGRVESIKIMRDYNTGYSFGFGFVKYFNEED 80
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
A A+ + M Y + L + P +M + +Y TN+ K VT+
Sbjct: 81 AAKAIQVINGM--NYKNKRLKVSYSRPP-----------GADMKASNLYITNLPKDVTED 127
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHST--RIAFVEFAMAESAIAAL-NCSGAVL--GSLPI 345
D+ F S GE+ + +L D +AFV F+ E A AA+ + G +L LP+
Sbjct: 128 DVHRLF-SNYGEIIQKSVLKDKITGMPRGVAFVRFSRGEEAKAAIADLDGKLLENAMLPL 186
Query: 346 RVSPSKTPVRPRA 358
V ++ R +A
Sbjct: 187 SVRVAEDHGRQKA 199
>gi|429329983|gb|AFZ81742.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 1110
Score = 54.7 bits (130), Expect = 8e-05, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 16/168 (9%)
Query: 208 CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLP 265
C+ N + + +VEF E+ AR + +G +P+ + K + P P
Sbjct: 914 CKPIEKRNFSVGYCYVEFDREDAAREVIQKLINEIG-WPLDCELEDVKFQVTPSIPMINK 972
Query: 266 RSEDEREM------------CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ 313
SE R++ SRT+Y TN+ K T+ ++ FF CG V+ +++ D
Sbjct: 973 TSERVRKIEKKMPTTLSKDKTSRTVYITNLSYKTTEDELSSFFTKSCGPVKAVQICLDRM 1032
Query: 314 HSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
+R FVEF +A+ AL S VL I VS S + +P+
Sbjct: 1033 GKSRGYGFVEFCDERTAMDALLLSTLVLDDREILVSRSNRAIYKDSPK 1080
Score = 49.7 bits (117), Expect = 0.003, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 155 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGD 213
N S+ R++ + + RTVY++++ + TE++L++ F +CG V +IC D
Sbjct: 971 NKTSERVRKIEKKMPTTLSKDKTSRTVYITNLSYKTTEDELSSFFTKSCGPVKAVQICLD 1030
Query: 214 PNSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
R + FVEF DE A AL L+ +L + V S AI +P
Sbjct: 1031 RMGKSRGYGFVEFCDERTAMDALLLSTLVLDDREILVSRSNRAIYKDSP 1079
>gi|328781105|ref|XP_624668.3| PREDICTED: RNA-binding protein 39-like [Apis mellifera]
Length = 506
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 13/207 (6%)
Query: 149 TTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 208
T R R + +G + R +E RTV+ + Q++ L F + G+V D
Sbjct: 117 TLPRARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDV 176
Query: 209 RI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTF 263
R+ C A+VEF D E AL L+G L P+ V + K + P
Sbjct: 177 RLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNL 236
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFV 321
+P+ + +Y ++ +T+ ++ FE G++ ++L+ D + S F+
Sbjct: 237 MPKGQT----GPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFL 291
Query: 322 EFAMAESAIAAL-NCSGAVLGSLPIRV 347
F A+ A AL +G L P++V
Sbjct: 292 TFRNADDAKKALEQLNGFELAGRPMKV 318
>gi|124513200|ref|XP_001349956.1| splicing factor, putative [Plasmodium falciparum 3D7]
gi|23615373|emb|CAD52364.1| splicing factor, putative [Plasmodium falciparum 3D7]
Length = 864
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALN 334
T+ N+D K + DI FF V G+V+ ++ + D + S +A+VEF E+ I AL
Sbjct: 488 TVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQEAVIKALA 547
Query: 335 CSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
+G +L + PI++ S+ + RA + H
Sbjct: 548 ANGMMLKNRPIKIQSSQAE-KNRAAKAAKH 576
>gi|270009354|gb|EFA05802.1| hypothetical protein TcasGA2_TC030646 [Tribolium castaneum]
Length = 212
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 21/193 (10%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEG 230
Q E + + V+ I Q TEE LA +F G+V +I D N+ F FV++ +EE
Sbjct: 21 QVECDKSKLIVNYIPQFATEEDLALIFTPIGRVESIKIMRDYNTGYSFGFGFVKYFNEED 80
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
A A+ + M Y + L + P +M + +Y TN+ K VT+
Sbjct: 81 AAKAIQVINGM--NYKNKRLKVSYSRPP-----------GADMKASNLYITNLPKDVTED 127
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHST--RIAFVEFAMAESAIAAL-NCSGAVL--GSLPI 345
D+ F S GE+ + +L D +AFV F+ E A AA+ + G +L LP+
Sbjct: 128 DVHRLF-SNYGEIIQKSVLKDKITGMPRGVAFVRFSRGEEAKAAIADLDGKLLENAMLPL 186
Query: 346 RVSPSKTPVRPRA 358
V ++ R +A
Sbjct: 187 SVRVAEDHGRQKA 199
>gi|261191422|ref|XP_002622119.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239589885|gb|EEQ72528.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239612708|gb|EEQ89695.1| RNA splicing factor [Ajellomyces dermatitidis ER-3]
gi|327351781|gb|EGE80638.1| RNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 583
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 14/184 (7%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ ++L F G Q+V R+ G V +VEF D
Sbjct: 182 EDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKD 238
Query: 228 EEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
EE A+ L G L P+ ++ ++ NP S ++ + +Y NI
Sbjct: 239 EESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE-ANASGNQNSIPFHRLYVGNIHF 297
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSL 343
+T+ D++ FE GE+ ++L + +R FV+F A AL +G L
Sbjct: 298 SITESDLQKVFEPF-GELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGFDLAGR 356
Query: 344 PIRV 347
PIRV
Sbjct: 357 PIRV 360
>gi|119496945|ref|XP_001265244.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
gi|158512647|sp|A1D4K4.1|PABP_NEOFI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119413406|gb|EAW23347.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
Length = 751
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 16/177 (9%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 123 CRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGY 182
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 278
FV + E A A+ ML L K + + R EM + +
Sbjct: 183 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNV 235
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 334
Y NID++VT + + FE GE+ L D + +R FV F+ +SA AA++
Sbjct: 236 YIKNIDQEVTDEEFRKMFEKF-GEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVD 291
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 53 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 112
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 113 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDAAIDNKALHDTF 160
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 161 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGML 204
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 19/110 (17%)
Query: 132 NNFIMHTDGTANTN-----GHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDI 186
NN I H +G + GH +++ R + M +N VY+ +I
Sbjct: 194 NNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFE---EMKANFTN----------VYIKNI 240
Query: 187 DQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL 235
DQ+VT+E+ +F G++ + D R F FV F+ + A+AA+
Sbjct: 241 DQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAV 290
>gi|345496336|ref|XP_001602582.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Nasonia vitripennis]
Length = 924
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 156 GYSQGKRRMNCRTSNAQQ-DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 214
GY + +M +N Q+ D I TV+VS++D TEE++ ++ R+ D
Sbjct: 656 GYEEADEKMEEDMNNLQEADPNI--TVFVSNLDYTATEEEVREALKPIWPIISFRMVKDF 713
Query: 215 NSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPV---RVLPSKTAIAPVNPTFLPRSEDE 270
+ F +V + EE AL L T + P+ R P KT+ P+ F ++E E
Sbjct: 714 KGRSKGFCYVSLSSEEAVNEALKLDRTRINGRPMFISRCDPDKTSRGPI---FKYKTELE 770
Query: 271 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAES 328
+ ++ + T+ D++ F V G ++ +R++ Y+ HS +A+VEF
Sbjct: 771 K----NKLFVKGLSPTTTKEDLENIF-RVHGSLKDVRIVT-YRNGHSKGLAYVEFDDENC 824
Query: 329 AIAALNCS-GAVLGSLPIRVSPSKTPVRPRAP 359
A AL + G + I V+ S+ P R P
Sbjct: 825 AAKALVATDGMTIADKVINVAISQPPQRKHLP 856
>gi|255572313|ref|XP_002527095.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223533518|gb|EEF35258.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 657
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD-EEGARAALS 236
++YV D++Q V EEQL LF QVV R+C D S L + +V F++ ++ A A +
Sbjct: 46 SLYVGDLEQNVNEEQLYDLFSQIAQVVSVRVCRDQTKRSSLGYGYVNFSNPQDAANAMKA 105
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T L P+R++ F R R+ ++ N+D + D KL
Sbjct: 106 LNFTPLNGKPIRIM------------FSHRDPSIRKSGYGNVFIKNLDSTL---DNKLLH 150
Query: 297 ESVC--GEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN 334
E+ G V ++ D S FV+F ESA A++
Sbjct: 151 ETFAAFGTVLSCKVAVDSNGQSKGYGFVQFENEESAERAIS 191
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 22/178 (12%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D IR++ V++ ++D + + L F G V+ C++ D N + +
Sbjct: 116 IRIMFSHRDPSIRKSGYGNVFIKNLDSTLDNKLLHETFAAFGTVLSCKVAVDSNGQSKGY 175
Query: 221 AFVEFTDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---R 276
FV+F +EE A A+S L G L V V F+ + E R S
Sbjct: 176 GFVQFENEESAERAISFLDGMCLNDKQVYV-----------GFFVRQQERTRTNGSPKFT 224
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
+Y N+ + +T D++ F V G + ++ D +R FV F +SA AA+
Sbjct: 225 NVYVKNLSETITNEDLEKVF-GVYGTITSALVMKDQTGKSRGFGFVNFQDPDSAAAAV 281
>gi|18026763|gb|AAL55607.1|AF196776_1 phragmoplastin-interacting protein PHIP1 [Arabidopsis thaliana]
Length = 597
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 88/191 (46%), Gaps = 18/191 (9%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEF 225
T N ++D V+ +YV I Q TE+++ + F +CG + VDC++ + + AF+ F
Sbjct: 150 TDNKEEDGVVPNKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRPEDGAFSGIAFITF 209
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER----EMCS--RTIY 279
E+GA+ AL+ +G R L + + P+ +PR + EM +Y
Sbjct: 210 DTEDGAKRALAFDRAAMGD---RYLTIQQYVKTTTPS-IPRRKTSSGFAPEMVDGYNRVY 265
Query: 280 CTNIDKKVTQGDI-KLFFESVCGEVQ--RLRLLGDYQHSTRIAFVEFAMAESAIAALNCS 336
N+ T+ DI KLF + V V+ + + G+++ + F + A
Sbjct: 266 IGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKGYAHVDFKDSVFCGDCAEA---G 322
Query: 337 GAVLGSLPIRV 347
AV+ P+++
Sbjct: 323 SAVICGRPVKI 333
>gi|367040559|ref|XP_003650660.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
gi|346997921|gb|AEO64324.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
Length = 777
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 24/180 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 135 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 194
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 195 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKAN 243
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
+Y NI+ +VT+ + + F + GEV L D + +R FV F SA A+
Sbjct: 244 FTNVYVKNINHEVTEEEFRELF-AKYGEVTSSSLARDNEGKSRGFGFVNFTTHASAAKAV 302
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + + ++G +A
Sbjct: 65 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSTQDGEKALEE 124
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 125 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDVAIDNKALHDTF 172
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D +++ FV + E+A A+ +L
Sbjct: 173 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGML 216
>gi|115491713|ref|XP_001210484.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
gi|114197344|gb|EAU39044.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
Length = 478
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV----LRFAFVEFTDEEG 230
E +R +YV +D +VTE+ L +F T G VV +I D N + FVEF D
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGA 146
Query: 231 A-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVT 288
A RA +L G + +R VN + + ++ + + I+ ++ +V
Sbjct: 147 AERAMQTLNGRRIHQSEIR----------VNWAYQSNNTNKEDTSNHFHIFVGDLSNEVN 196
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSL 343
+I L S G V R++ D + +AF E + AE A+++++ G LGS
Sbjct: 197 D-EILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMD--GEWLGSR 253
Query: 344 PIR 346
IR
Sbjct: 254 AIR 256
>gi|350410158|ref|XP_003488966.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus impatiens]
Length = 532
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 13/207 (6%)
Query: 149 TTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 208
T R R + +G + R +E RTV+ + Q++ L F + G+V D
Sbjct: 143 TLPRARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDV 202
Query: 209 RI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTF 263
R+ C A+VEF D E AL L+G L P+ V + K + P
Sbjct: 203 RLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNL 262
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFV 321
+P+ + +Y ++ +T+ ++ FE G++ ++L+ D + S F+
Sbjct: 263 MPKGQT----GPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFL 317
Query: 322 EFAMAESAIAAL-NCSGAVLGSLPIRV 347
F A+ A AL +G L P++V
Sbjct: 318 TFRNADDAKKALEQLNGFELAGRPMKV 344
>gi|82595543|ref|XP_725893.1| splicing factor [Plasmodium yoelii yoelii 17XNL]
gi|23481068|gb|EAA17458.1| putative splicing factor [Plasmodium yoelii yoelii]
Length = 698
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALN 334
T+ N+D K + DI FF V G+V+ ++ + D + S +A+VEF +S I AL+
Sbjct: 319 TVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQDSVIKALS 378
Query: 335 CSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
+G +L + PI+V S+ + RA + H
Sbjct: 379 VNGYMLKNRPIKVQSSQAE-KNRAAKATKH 407
>gi|340718898|ref|XP_003397899.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus
terrestris]
Length = 520
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 13/207 (6%)
Query: 149 TTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 208
T R R + +G + R +E RTV+ + Q++ L F + G+V D
Sbjct: 131 TLPRARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDV 190
Query: 209 RI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTF 263
R+ C A+VEF D E AL L+G L P+ V + K + P
Sbjct: 191 RLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNL 250
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFV 321
+P+ + +Y ++ +T+ ++ FE G++ ++L+ D + S F+
Sbjct: 251 MPKGQT----GPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFL 305
Query: 322 EFAMAESAIAAL-NCSGAVLGSLPIRV 347
F A+ A AL +G L P++V
Sbjct: 306 TFRNADDAKKALEQLNGFELAGRPMKV 332
>gi|340055809|emb|CCC50130.1| conserved hypothetical protein, fragment, partial [Trypanosoma
vivax Y486]
Length = 657
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 10/166 (6%)
Query: 92 VDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTR 151
V + + P+AA F +N + F + P G N F T NT + R
Sbjct: 19 VSSVRGIEPLAASFPMCYASNTPVLQFQVSELMPPMEGGRNPF---TYFGPNTGSNPKKR 75
Query: 152 RKRNGYSQGK-RRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 210
+ S K +R +A + +++ RTV++ + + + + +LA L CG+ + RI
Sbjct: 76 LHQEFKSLSKEQRKRLVEEDAVKTDLLARTVHLRFLPKGMLQSELAALCAECGEYLRVRI 135
Query: 211 CGDPNSV--LRFAFVEFTDEEGARAALSLAGTML----GFYPVRVL 250
CG+ S + FVEF D++GA A + +G L G P+R++
Sbjct: 136 CGNATSTQNWIYGFVEFADKQGAAAMMRRSGMELSNGPGKPPLRLM 181
>gi|254578926|ref|XP_002495449.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
gi|238938339|emb|CAR26516.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
Length = 587
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 17/186 (9%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFT 226
S++Q+ E ++YV ++D V+E L +F G V R+C D + L +A+V F
Sbjct: 30 SDSQKVETSTASLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFN 89
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 286
D E R A+ L + P++ P + + +P+ R+ S I+ N+
Sbjct: 90 DYEAGRQAIE----KLNYTPIKGQPCRIMWSQRDPSL-------RKKGSGNIFIKNLHAD 138
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFAMAESAIAALNC-SGAVLGSL 343
+ + F SV G + ++ D +S FV F E+A A++ +G +L
Sbjct: 139 IDNKALHDTF-SVFGNILSCKIATDEVTGNSKGFGFVHFESDEAAREAIDAINGMLLNGQ 197
Query: 344 PIRVSP 349
+ V+P
Sbjct: 198 EVYVAP 203
>gi|195110141|ref|XP_001999640.1| GI22960 [Drosophila mojavensis]
gi|193916234|gb|EDW15101.1| GI22960 [Drosophila mojavensis]
Length = 475
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 92/190 (48%), Gaps = 21/190 (11%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 292
AL+ RV K VN P + + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNK-------RVFLDKE--IKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETL 111
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTR------IAFVEFAMAESAIAALNCSGAVLGSLPIR 346
+ F GE+ R++ D H+ + ++FV+ A AE+AI ++N G +GS IR
Sbjct: 112 REAFAPF-GEISNCRIVRD-PHTMKSKGYAFVSFVKKAEAENAIQSMN--GQWIGSRNIR 167
Query: 347 VSPSKTPVRP 356
+ S + P
Sbjct: 168 TNWSTRKLPP 177
>gi|70990636|ref|XP_750167.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|74669855|sp|Q4WK03.1|PABP_ASPFU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|66847799|gb|EAL88129.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|159130644|gb|EDP55757.1| polyadenylate-binding protein [Aspergillus fumigatus A1163]
Length = 753
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 16/177 (9%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 123 CRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGY 182
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 278
FV + E A A+ ML L K + + R EM + +
Sbjct: 183 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNV 235
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 334
Y NID++VT + + FE GE+ L D + +R FV F+ +SA AA++
Sbjct: 236 YIKNIDQEVTDEEFRKMFEKF-GEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAVD 291
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 53 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 112
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 113 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDAAIDNKALHDTF 160
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 161 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGML 204
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 19/110 (17%)
Query: 132 NNFIMHTDGTANTN-----GHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDI 186
NN I H +G + GH +++ R + M +N VY+ +I
Sbjct: 194 NNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFE---EMKANFTN----------VYIKNI 240
Query: 187 DQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL 235
DQ+VT+E+ +F G++ + D R F FV F+ + A+AA+
Sbjct: 241 DQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAV 290
>gi|453085206|gb|EMF13249.1| polyadenylate binding protein [Mycosphaerella populorum SO2202]
Length = 760
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 20/179 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T +++ ++D + + L F G ++ C++ D + R +
Sbjct: 124 CRIMWSQRDPALRKTGHGNIFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDESGGSRGY 183
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + E A AA+ S+ G +L V V +P K ++ +E +
Sbjct: 184 GFVHYETAEAANAAIKSVNGMLLNEKKVFVGHHIPKKDRMSKF---------EEMKANFT 234
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 334
IY NID + T + + FE GE+ L D + R FV + E A A++
Sbjct: 235 NIYVKNIDTETTDDEFRELFEKY-GEITSASLARDQEGKVRGFGFVNYIRHEDANKAVD 292
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 54 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSANDGERALEE 113
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ I+ N+D + + F
Sbjct: 114 LNYTLIKGKPCRIMWSQ------------RDPALRKTGHGNIFIKNLDAAIDNKALHDTF 161
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D +R FV + AE+A AA+ +L
Sbjct: 162 -AAFGNILSCKVAQDESGGSRGYGFVHYETAEAANAAIKSVNGML 205
>gi|50547639|ref|XP_501289.1| YALI0C00539p [Yarrowia lipolytica]
gi|74689742|sp|Q6CDH3.1|PABP_YARLI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49647156|emb|CAG81584.1| YALI0C00539p [Yarrowia lipolytica CLIB122]
Length = 629
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 16/183 (8%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDE 228
+++D+ ++YV ++D VTE L +F G V R+C D L +A+V F ++
Sbjct: 38 SKEDQGDNASLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHNQ 97
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
AL L + P++ P + + +P R+ + IY N+D +
Sbjct: 98 ADGIRALE----ELNYSPIKERPCRIMWSQRDPAL-------RKTGAGNIYIKNLDPAID 146
Query: 289 QGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIR 346
+ F S G++ ++ D + +S FV + AESA +A+ + +G +L +
Sbjct: 147 NKALHDTF-SAFGQILSCKIATDEFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKVF 205
Query: 347 VSP 349
V P
Sbjct: 206 VGP 208
>gi|356512787|ref|XP_003525097.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 554
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 87/199 (43%), Gaps = 11/199 (5%)
Query: 160 GKR-RMNCRTSNAQQD-EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV 217
G+R R+ S + D E +RTV+ + + TE + F G+V D R+ D NS
Sbjct: 174 GRRFRVKKEASEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSR 233
Query: 218 LR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDERE 272
++EF D A++L+G +L PV V PS K +
Sbjct: 234 RSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASGGAAGVAGPYG 293
Query: 273 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAI 330
R +Y N+ +T+ ++ FE G V+ ++L D + H FV+F E A
Sbjct: 294 AVDRKLYVGNLHFNMTESQLREIFEPF-GPVEVVQLPLDLETGHCKGFGFVQFTHLEHAK 352
Query: 331 AALNCSGAV-LGSLPIRVS 348
AA + +G + + I+VS
Sbjct: 353 AAQSLNGKLEIAGRTIKVS 371
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVE 322
P ++ ER+ RT++ + K T+ D+ FF S G+V+ +RL+ D + S + ++E
Sbjct: 186 PEADPERD--QRTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIE 242
Query: 323 FAMAESAIAALNCSGAVLGSLPIRVSPSKT 352
F A S A+ SG +L P+ V PS+
Sbjct: 243 FYDAMSVPMAIALSGQLLLGQPVMVKPSEA 272
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 13/207 (6%)
Query: 149 TTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 208
T R R + +G + R +E RTV+ + Q++ L F + G+V D
Sbjct: 119 TLPRARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDV 178
Query: 209 RI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTF 263
R+ C A+VEF D E AL L+G L P+ V + K + P
Sbjct: 179 RLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNL 238
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFV 321
+P+ + +Y ++ +T+ ++ FE G++ ++L+ D + S F+
Sbjct: 239 MPKGQT----GPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFL 293
Query: 322 EFAMAESAIAAL-NCSGAVLGSLPIRV 347
F A+ A AL +G L P++V
Sbjct: 294 TFRNADDAKKALEQLNGFELAGRPMKV 320
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 13/207 (6%)
Query: 149 TTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 208
T R R + +G + R +E RTV+ + Q++ L F + G+V D
Sbjct: 119 TLPRARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDV 178
Query: 209 RI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTF 263
R+ C A+VEF D E AL L+G L P+ V + K + P
Sbjct: 179 RLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNL 238
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFV 321
+P+ + +Y ++ +T+ ++ FE G++ ++L+ D + S F+
Sbjct: 239 MPKGQT----GPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPETGRSKGYGFL 293
Query: 322 EFAMAESAIAAL-NCSGAVLGSLPIRV 347
F A+ A AL +G L P++V
Sbjct: 294 TFRNADDAKKALEQLNGFELAGRPMKV 320
>gi|224061487|ref|XP_002300504.1| predicted protein [Populus trichocarpa]
gi|222847762|gb|EEE85309.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 10/89 (11%)
Query: 74 HMERKMG-ESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGY-- 130
H +R G ES+K E+R+L ++ SKLNPMAAEFVPPSL+N F G NG Y
Sbjct: 60 HQQRSNGGESYK-REIRELQELFSKLNPMAAEFVPPSLSNNNSFGTVNGLNGVNGGFYGN 118
Query: 131 ---TNNFIMHTDG---TANTNGHTTTRRK 153
+NN +++ +G NG+ R K
Sbjct: 119 SSSSNNLVVNGNGFDRNGQVNGNAARRVK 147
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 16/174 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D VT+ QL LF GQVV R+C D S L + +V + + + A AL +
Sbjct: 28 SLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALEV 87
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L F P+ P + + +PT R + I+ N+DK + + F
Sbjct: 88 ----LNFTPLHGKPIRIMYSNRDPTI-------RRSGNGNIFIKNLDKAIDHKALHDTF- 135
Query: 298 SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
S G + ++ D S FV++ E+A A+ +G +L + V P
Sbjct: 136 SAFGNILSCKVAVDSSGQSKGYGFVQYDSDEAAQKAIEKLNGMLLNDKQVYVGP 189
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D +++++L LF G + C++ DP+ V + + FV F T EE +RA +
Sbjct: 311 LYLKNLDDSISDDKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSTPEEASRALSEMN 370
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 371 GKMVVSKPLYV 381
Score = 37.7 bits (86), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 31/187 (16%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSLA 238
V+V ++ + EE+L +F G + + D + R F FV F + E+ ARA +L
Sbjct: 208 VFVKNLSESTLEEELRKIFGEFGTITSVAVMKDEDGKSRCFGFVNFENAEDAARAVEALN 267
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR---------------TIYCTNI 283
G L V ++ +SE E E+ R +Y N+
Sbjct: 268 GYKLDNKDWFVGRAQK-----------KSEREMELKHRFEQSAQEAVDKSQGLNLYLKNL 316
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLG 341
D ++ +K F S G + +++ D ++ FV F+ E A AL+ +G ++
Sbjct: 317 DDSISDDKLKELF-SPYGTITSCKVMRDPSGVSKGSGFVAFSTPEEASRALSEMNGKMVV 375
Query: 342 SLPIRVS 348
S P+ V+
Sbjct: 376 SKPLYVA 382
>gi|429859146|gb|ELA33937.1| polyadenylate-binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 688
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 24/180 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 105 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 164
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 165 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 213
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
+Y NI +VT + + F + G+V L D + +R FV F E+A A+
Sbjct: 214 FTNVYVKNIANEVTDDEFRDLF-AAFGDVTSSSLARDQEGKSRGFGFVNFTTHEAAAKAV 272
>gi|255934068|ref|XP_002558315.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582934|emb|CAP81139.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 496
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 77/180 (42%), Gaps = 19/180 (10%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGA 231
E +R +YV +D +VTE+ L +F T G VV +I D N + + FVEF D A
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFTTKGHNYGFVEFDDPGAA 146
Query: 232 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 289
RA +L G + +R VN + S + + + I+ ++ +V
Sbjct: 147 ERAMQTLNGRRIHQSEIR----------VNWAYQSNSTSKEDTSNHFHIFVGDLSNEVND 196
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIR 346
+ F S G V R++ D + S FV F A ALN G LGS IR
Sbjct: 197 EVLTQAF-SAFGSVSEARVMWDMKTGRSRGYGFVAFRDRAEADKALNSMDGEWLGSRAIR 255
>gi|357610697|gb|EHJ67099.1| TIA-1-related RNA binding protein [Danaus plexippus]
Length = 388
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 92/189 (48%), Gaps = 19/189 (10%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D VTEE L LF G+V C+I +P + +AF+EFT+ A
Sbjct: 3 DESHPKTLYVGNLDASVTEEFLCALFGQIGEVKGCKIIREPGND-PYAFLEFTNHASAAT 61
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
AL+ + + + + A +P N P+++ I+ ++ ++ ++
Sbjct: 62 ALAAMNRRV--FLEKEMKVNWATSPGN---QPKTDTSNH---HHIFVGDLSPEIETHILR 113
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRVS 348
F GE+ R++ D Q S AFV F A AE+AI A+N G LGS IR +
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN--GQWLGSRSIRTN 170
Query: 349 PS--KTPVR 355
S K P +
Sbjct: 171 WSTRKPPTK 179
>gi|84998214|ref|XP_953828.1| polyadenylate (poly(A)) binding protein [Theileria annulata]
gi|65304825|emb|CAI73150.1| polyadenylate (poly(A)) binding protein, putative [Theileria
annulata]
Length = 664
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 26/179 (14%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR----FAFVEFTDEEGARAAL 235
++YV D+ VTE L +F T G V R+C D SV R +A+V + + A AAL
Sbjct: 28 SLYVGDLKPDVTEAVLYEVFNTVGPVASIRVCRD--SVTRKSLGYAYVNYYSTQDAEAAL 85
Query: 236 -SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
SL + +P R++ S R R + I+ N+DK + D K
Sbjct: 86 ESLNYIEIKGHPTRIMWSN------------RDPSLRRSGAGNIFVKNLDKSI---DTKS 130
Query: 295 FFESVC--GEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
+++ G + ++ D S R FV + ESA A+ +G ++G + V+P
Sbjct: 131 LYDTFSHFGPILSCKVAVDASGASKRYGFVHYENEESAREAIEKVNGMLIGGKRVEVAP 189
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFT 226
+S Q+D+ + +Y+ ++D +E L LF G + ++ D N+ R F FV FT
Sbjct: 295 SSMGQEDKRVTSNLYIKNLDDSFDDESLGELFKPFGTITSSKVMLDANNHSRGFGFVCFT 354
Query: 227 DEEGARAALS 236
+ + A A++
Sbjct: 355 NPQEATKAIA 364
>gi|255080002|ref|XP_002503581.1| predicted protein [Micromonas sp. RCC299]
gi|226518848|gb|ACO64839.1| predicted protein [Micromonas sp. RCC299]
Length = 597
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
++Y D+D TE QL LF T G VV R+C D L +A+V F ++GA AA ++
Sbjct: 21 SLYCGDLDSNCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNF--QQGADAARAI 78
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
+L F V P + + +P R+ I+ N+DK++ D K ++
Sbjct: 79 --DVLNFNVVNGKPIRIMYSQRDPAL-------RKSGVGNIFIKNLDKEI---DNKALYD 126
Query: 298 SVC--GEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 349
+ G + ++ D Q ++ FV+FA E+A A++ +G +L + V P
Sbjct: 127 TFSQFGNIVSAKVAADGQGVSKGYGFVQFAEQEAAQQAIDKVNGMLLNDKQVYVGP 182
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSLA 238
+Y+ +++ V + +L LF G + CR+ D + R AFV F+ +E RA +
Sbjct: 303 LYIKNLEDTVDDAKLRELFAEFGTITSCRVMRDASGASRGSAFVAFSSADEATRAVTEMN 362
Query: 239 GTMLGFYPVRV 249
G M G P+ V
Sbjct: 363 GKMAGTKPLYV 373
>gi|195429537|ref|XP_002062815.1| GK19652 [Drosophila willistoni]
gi|194158900|gb|EDW73801.1| GK19652 [Drosophila willistoni]
Length = 638
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 25/183 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +RR+ V++ ++D+Q+ + + F G ++ C++ D + +
Sbjct: 73 IRIMWSQRDPSLRRSGVGNVFIKNLDRQIDNKAIYDTFSAFGNILSCKVALDEKGNSKGY 132
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 133 GFVHFETEEAANTSIEKVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLF 182
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIA 331
+Y N ++ +K FFE G++ +++ ++ +AF AE+A+
Sbjct: 183 TNVYVKNFTEEFDDEKLKDFFEP-YGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQ 241
Query: 332 ALN 334
ALN
Sbjct: 242 ALN 244
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 15/153 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
++YV D+ Q + E L F + G V+ R+C D L +A+V F A AL
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD- 61
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
+ F +R P + + +P+ R ++ N+D+++ I F
Sbjct: 62 ---TMNFDLIRNKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDRQIDNKAIYDTF- 110
Query: 298 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 329
S G + ++ D + +++ FV F E+A
Sbjct: 111 SAFGNILSCKVALDEKGNSKGYGFVHFETEEAA 143
>gi|324512478|gb|ADY45169.1| Splicing factor 3B subunit 4 [Ascaris suum]
Length = 399
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 84/180 (46%), Gaps = 29/180 (16%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
T+YV +D++VT+ L LF+ G VV + D NS F FVEF EE A A+ +
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQSGPVVSVNMPKDRVTNSHQGFGFVEFMGEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y P++V + S E+ M I+ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIKVNKA--------------SAHEKNMDVGANIFVGNLDPEV---DEKL 115
Query: 295 FFES-----VCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 348
F++ V +V ++ + +S AFV FA E++ +A+ SG L + I VS
Sbjct: 116 LFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFASFEASDSAIEAMSGQFLCNRAITVS 175
>gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsis thaliana]
gi|75334165|sp|Q9FPJ8.1|RB45A_ARATH RecName: Full=Polyadenylate-binding protein RBP45A;
Short=Poly(A)-binding protein RBP45A; AltName:
Full=RNA-binding protein 45A; Short=AtRBP45A
gi|11762114|gb|AAG40335.1|AF324983_1 AT5g54900 [Arabidopsis thaliana]
gi|119360145|gb|ABL66801.1| At5g54900 [Arabidopsis thaliana]
gi|332009171|gb|AED96554.1| RNA-binding protein 45A [Arabidopsis thaliana]
Length = 387
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 19/193 (9%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTC-GQVVDCRICGDPNS--VLRFAFVEFTDE- 228
Q E T++V D+ +VT+ L+ F G V ++ D + + FV F DE
Sbjct: 148 QTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADEN 207
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIA-PVNPTFLPRSE----DEREMCSRTIYCTNI 283
E RA + G P+R+ P+ A P+ P ++ + + + TI+ +
Sbjct: 208 EQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGANAGDNDPNNTTIFVGGL 267
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF---AMAESAIAALNCSGAVL 340
D VT ++K F GE+ +++ R FV++ A AE A++ LN G L
Sbjct: 268 DANVTDDELKSIFGQF-GELLHVKI----PPGKRCGFVQYANKASAEHALSVLN--GTQL 320
Query: 341 GSLPIRVSPSKTP 353
G IR+S ++P
Sbjct: 321 GGQSIRLSWGRSP 333
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVE 224
N + +NA ++ T++V +D VT+++L ++F G+++ +I P R FV+
Sbjct: 246 NTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKI--PPGK--RCGFVQ 301
Query: 225 FTDEEGARAALS-LAGTMLGFYPVRV 249
+ ++ A ALS L GT LG +R+
Sbjct: 302 YANKASAEHALSVLNGTQLGGQSIRL 327
>gi|224083926|ref|XP_002307174.1| predicted protein [Populus trichocarpa]
gi|222856623|gb|EEE94170.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 14/185 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+T++V ++ QV + F G+V D R D + + F VEFT E A AL+
Sbjct: 391 KTLFVGNLSFQVERADVENFFKEAGEVADVRFALDADQRFKGFGHVEFTTTEAALKALNF 450
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC------SRTIYCTNIDKKVTQGD 291
G L VR+ ++ + T P S+D S+TI+ DK + +
Sbjct: 451 NGKSLLGRDVRLDLARERGERTSNT--PYSKDSNSFQKGGRGQSQTIFVKGFDKFGAEDE 508
Query: 292 IKLFFES---VCGEVQRLRLLGDYQHST--RIAFVEFAMAESAIAALNCSGAVLGSLPIR 346
I+ + CGE+ R+ + DY+ +A++EF A++ A +G+ LG +
Sbjct: 509 IRSSLQEHFGSCGEISRISIPTDYETGAIKGMAYLEFNDADAMNKAFELNGSQLGESYLT 568
Query: 347 VSPSK 351
V +K
Sbjct: 569 VDEAK 573
>gi|68073969|ref|XP_678899.1| splicing factor [Plasmodium berghei strain ANKA]
gi|56499509|emb|CAH94054.1| splicing factor, putative [Plasmodium berghei]
Length = 535
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALN 334
T+ N+D K + DI FF V G+V+ ++ + D + S +A+VEF ES I AL+
Sbjct: 156 TVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQESVIKALS 215
Query: 335 CSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
+G +L + PI+V S+ + RA + H
Sbjct: 216 VNGYMLKNRPIKVQSSQAE-KNRAAKATKH 244
>gi|340939192|gb|EGS19814.1| hypothetical protein CTHT_0042990 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 777
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 24/176 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T +++ ++D + + L F G ++ C++ D N + +
Sbjct: 139 CRIMWSQRDPALRKTGHGNIFIKNLDAAIDNKALHDTFAAFGNILSCKVATDENGNSKGY 198
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 199 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKAN 247
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 329
+Y NI+ +VT+ + + FF S GE+ L D + R FV ++ SA
Sbjct: 248 YTNVYIKNINLEVTEEEFREFF-SKWGEITSSTLARDAEGKPRGFGFVNYSTHASA 302
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 69/165 (41%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + +G +A
Sbjct: 69 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSVADGEKALEE 128
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ I+ N+D + + F
Sbjct: 129 LNYTLIKGKPCRIMWSQ------------RDPALRKTGHGNIFIKNLDAAIDNKALHDTF 176
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D +++ FV + E+A A+ +L
Sbjct: 177 -AAFGNILSCKVATDENGNSKGYGFVHYETDEAAAQAIKHVNGML 220
>gi|224062834|ref|XP_002300896.1| predicted protein [Populus trichocarpa]
gi|222842622|gb|EEE80169.1| predicted protein [Populus trichocarpa]
Length = 648
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 20/177 (11%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV--LRFAFVEFTDEEGARAALS 236
R++YV D++ V E QL LF VV R+C D + L +A+V F++ + A A+
Sbjct: 33 RSLYVGDLEHNVKEGQLFDLFSQVAPVVSTRVCRDQAGLTSLGYAYVNFSNPQDAAKAME 92
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ L F P+ P + + +PT R ++ N+D K+ D K +
Sbjct: 93 V----LNFTPLNGKPIRIMFSHRDPT-------TRRSGHANVFIKNLDTKI---DNKALY 138
Query: 297 ESVC--GEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 349
E+ G V ++ D S F++F E A +A+N +G ++ + V P
Sbjct: 139 ETFASFGPVLSCKVAVDNNGQSKGYGFIQFENEEDAQSAINRLNGMLVNDREVYVGP 195
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 17/180 (9%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLA 238
VYV ++ + ++E L +F + G + + D N R F FV F + A AA+ L
Sbjct: 214 VYVKNLSETTSDEDLKKIFSSYGAITSAIVMKDQNGKSRGFGFVNFQSPDSAAAAVEKLN 273
Query: 239 GTMLG---FYPVRVLPSKTAIAPVNPTFLPRSEDER-----EMCSRTIYCTNIDKKVTQG 290
G +Y R A + F E ER +M + +Y N+ + +
Sbjct: 274 GMTFSDKVWYVGRAQRKGEREAELKAKF----EQERNSRYEKMKAANLYLKNLGDTIDEE 329
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 348
+K F S G + +++ D Q ++ FV F+ E A AL+ +G ++G P+ V+
Sbjct: 330 RLKELF-SEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALSEMNGKMIGKKPLYVA 388
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 16/137 (11%)
Query: 127 GFGYTNNFIMHTDGTA----NTNGHTTT-------RRKRNGYSQGKRRMNC-RTSNAQQD 174
GFG+ N D A NG T + R +R G + + + + N++ +
Sbjct: 253 GFGFVN--FQSPDSAAAAVEKLNGMTFSDKVWYVGRAQRKGEREAELKAKFEQERNSRYE 310
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGAR 232
++ +Y+ ++ + EE+L LF G + C++ D + + + FV F T EE +R
Sbjct: 311 KMKAANLYLKNLGDTIDEERLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASR 370
Query: 233 AALSLAGTMLGFYPVRV 249
A + G M+G P+ V
Sbjct: 371 ALSEMNGKMIGKKPLYV 387
>gi|123485827|ref|XP_001324580.1| spliceosomal protein [Trichomonas vaginalis G3]
gi|121907465|gb|EAY12357.1| spliceosomal protein, putative [Trichomonas vaginalis G3]
Length = 221
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 82/177 (46%), Gaps = 22/177 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALS- 236
T+++ DI + VTEE L LF+ G VV I D N + +AFVEF E+ ALS
Sbjct: 13 TLFLCDISEHVTEEILTELFMQVGPVVFVNIPRDRITNRMNGYAFVEFRTEQDCMYALSV 72
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ G L P+++ + T P + DE ++ ++ +Y N+ + V G++ F
Sbjct: 73 MQGVKLFGVPLKLSANST----------PSTGDELDVGAK-LYIGNLSQDVNDGNLLQTF 121
Query: 297 ESVCGEVQRLRLL-----GDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVS 348
G V R++ G +A+ F A+ A A+N G G PI VS
Sbjct: 122 RQF-GNVLHARVVVDPATGKSLGHGFVAYDSFDAADKAKKAMN--GEYFGGQPITVS 175
>gi|428673176|gb|EKX74089.1| polyadenylate-binding protein, putative [Babesia equi]
Length = 663
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 20/176 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALSL 237
++YV D+ VTE L +F + G V R+C D L +A+V + + A AAL
Sbjct: 32 SLYVGDLQPDVTEAILYEVFNSVGPVSSIRVCRDSITRKSLGYAYVNYYSVQDAEAALE- 90
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L + ++ P++ + +PT R+ + I+ N+D+ + D K F++
Sbjct: 91 ---SLNYIDIKGHPTRIMWSNKDPTL-------RKSGAGNIFVKNLDRSI---DTKAFYD 137
Query: 298 SVC--GEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
+ G + ++ D ++ FV + ESA A+ +G V+G + VSP
Sbjct: 138 TFSHFGPILSCKVAMDENGVSKGYGFVHYDTEESAKEAIEKVNGMVIGGKKVEVSP 193
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D +R++ ++V ++D+ + + F G ++ C++ D N V + +
Sbjct: 102 TRIMWSNKDPTLRKSGAGNIFVKNLDRSIDTKAFYDTFSHFGPILSCKVAMDENGVSKGY 161
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RT 277
FV + EE A+ A+ + G ++G V V P F+ + + +
Sbjct: 162 GFVHYDTEESAKEAIEKVNGMVIGGKKVEVSP-----------FIKKQDRDPASVDVFTN 210
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALN 334
+Y N + +K F + GE+ + + D + + AFV FA MA+ A+ ALN
Sbjct: 211 LYVRNFPVSWDEEALKQFLDKY-GEITSMMIKEDGK-GRKFAFVNFAEPEMAKEAVEALN 268
Query: 335 CSGAVLGSLPIRVSPSKTPVRPRA 358
+ GS P+ V P + + +A
Sbjct: 269 GTKLEEGSEPLLVCPHQDKAKRQA 292
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 236
+Y+ ++D T+E L LF G + C+I D + V R F FV F+ E A A++
Sbjct: 314 LYIKNLDDSFTDESLQELFGQFGSITSCKIMRDASGVSRGFGFVCFSRPEEATKAIA 370
>gi|198422099|ref|XP_002129220.1| PREDICTED: similar to RNA binding motif protein 39 [Ciona
intestinalis]
Length = 465
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR---IAFVEFAMAESAIA 331
+RTI+C + +++ D++ FF SV G+V+ ++L+ D +HS R IA+VEF ES
Sbjct: 103 ARTIFCMQLAQRIRVRDLEEFFSSV-GKVREVKLIQD-KHSKRSKGIAYVEFKDLESIPL 160
Query: 332 ALNCSGAVLGSLPIRVSPSKT 352
AL SG L +PI V P+++
Sbjct: 161 ALGLSGQKLLGVPIVVQPTQS 181
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 86/173 (49%), Gaps = 7/173 (4%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 236
RT++ + Q++ L F + G+V + ++ D +S A+VEF D E AL
Sbjct: 104 RTIFCMQLAQRIRVRDLEEFFSSVGKVREVKLIQDKHSKRSKGIAYVEFKDLESIPLALG 163
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L+G L P+ V P+++ + L S + + +Y ++ + +T+ IK F
Sbjct: 164 LSGQKLLGVPIVVQPTQSEKNKIAAAQL--SLQKAALGPTKLYVGSLHENITEEMIKGIF 221
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRV 347
S G V++++++ D ++R F+ FA AE A AL+ +G + PI++
Sbjct: 222 -SPFGRVEQVQIIKDDAGASRGYGFITFAEAECAKRALDQLNGFEIAGKPIKL 273
>gi|190405722|gb|EDV08989.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
Length = 262
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 24/209 (11%)
Query: 149 TTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 208
T + N Q ++ S +Q E ++YV D++ V+E L +F G V
Sbjct: 8 TAEQLENLNIQDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSI 67
Query: 209 RICGDP--NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 266
R+C D + L +A+V F D E R A+ L + P++ + + +P+
Sbjct: 68 RVCRDAITKTSLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL--- 120
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR----IAF 320
R+ S I+ N+ + D K ++ SV G++ ++ D ++ + F
Sbjct: 121 ----RKKGSGNIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
Query: 321 VEFAMAESAIAALNCSGAVLGSLPIRVSP 349
E A+ AI ALN G +L I V+P
Sbjct: 174 EEEGAAKEAIDALN--GMLLNGQEIYVAP 200
>gi|442761059|gb|JAA72688.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Ixodes ricinus]
Length = 235
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 19/196 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGARAAL 235
RTV+ + Q++ L F G+V D R+ D N R A+VEF D E A+
Sbjct: 43 RTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMD-NKTRRSKGIAYVEFQDVESVPLAM 101
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR------TIYCTNIDKKVTQ 289
L G L P+ V P++ A N + R +Y ++ +T+
Sbjct: 102 GLNGQKLFGIPIVVQPTQ---AERNRAAAQSASTSSSTLQRGNIGPMRLYVGSLHFNITE 158
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIR 346
+K FE G++ ++ L+ D + S F+ F +E A AL +G L P++
Sbjct: 159 DMLKGIFEP-FGKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFELAGRPMK 217
Query: 347 VS--PSKTPVRPRAPR 360
V +T V P+APR
Sbjct: 218 VGHVTERTDVVPKAPR 233
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 269 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFAMA 326
+ER+M RT++C + +++ D++ FF +V G+V+ +RL+ D + S IA+VEF
Sbjct: 38 EERDM--RTVFCMQLSQRIRARDLEEFFSAV-GKVRDVRLIMDNKTRRSKGIAYVEFQDV 94
Query: 327 ESAIAALNCSGAVLGSLPIRVSPSK 351
ES A+ +G L +PI V P++
Sbjct: 95 ESVPLAMGLNGQKLFGIPIVVQPTQ 119
>gi|321471820|gb|EFX82792.1| hypothetical protein DAPPUDRAFT_302363 [Daphnia pulex]
Length = 841
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 8/179 (4%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLA 238
TV++S++ + +E+ + + + G + D R+ D + F FVEF+ ++ ARA L
Sbjct: 603 TVFLSNLAYETSEQDVRNMMSSSGTITDIRLVLDYKQRCKGFCFVEFSSQDEARAVLKRD 662
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
++ PV + PS+ A +P F +S E+ + ++ + T+ D++ F+
Sbjct: 663 RELMKGRPVFMSPSEPDAALKHPAFKYQSTLEK----KKLFIKGLALSTTKEDLEALFKK 718
Query: 299 VCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVSPSKTPVR 355
G ++ +RL+ S + +A+VEF SA ALN G + V+ S P R
Sbjct: 719 F-GILKDVRLVTFRNGSPKGLAYVEFEDEVSATMALNQTDGTTFQDKVLTVALSNPPPR 776
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 248 RVLPSKTAIAPVN-PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRL 306
+V P A P + P +P+ + + T++ +N+ + ++ D++ S G + +
Sbjct: 573 KVEPKVNATEPASKPVVIPKPVTDPSRHANTVFLSNLAYETSEQDVRNMMSS-SGTITDI 631
Query: 307 RLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
RL+ DY+ + FVEF+ + A A L ++ P+ +SPS+
Sbjct: 632 RLVLDYKQRCKGFCFVEFSSQDEARAVLKRDRELMKGRPVFMSPSE 677
>gi|326516828|dbj|BAJ96406.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 744
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 80/176 (45%), Gaps = 20/176 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D V + QL +F G VV R+C D S L +A+V + A AL
Sbjct: 126 SLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAARALE- 184
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
ML F P+ P + + +P+ R+ + I+ N+DK + D K +
Sbjct: 185 ---MLNFTPINGRPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALHD 231
Query: 298 SVC--GEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
+ C G + ++ D ++ FV++ E+A AA+ +G ++ + V P
Sbjct: 232 TFCVFGNILSCKVATDPAGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGP 287
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 231
D+ +Y+ ++D V +E+L LF G + C++ D N R + FV F + ++ +
Sbjct: 402 DKYQNTNLYLKNLDDTVDDEKLRELFAEFGTITSCKVMRDSNGASRGSGFVAFKSADDAS 461
Query: 232 RAALSLAGTMLGFYPVRV 249
RA + M+G P+ V
Sbjct: 462 RALAEMNNKMVGNKPLYV 479
>gi|29436780|gb|AAH49453.1| Cugbp1 protein [Danio rerio]
Length = 534
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 18/196 (9%)
Query: 160 GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD----PN 215
G ++MN + Q ++ ++V I + +E+QL LF G V + + D P
Sbjct: 35 GSKKMNGSLDHPDQPDIDSIKMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPP 94
Query: 216 SVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS 275
FV + + A A + + +++LP + P SE +
Sbjct: 95 QSKGCCFVTYYTRKSALEAQN------ALHNMKILPGMHHPIQMKPA---DSEKNNAVED 145
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAA 332
R ++ I KK + DI+L F S G+++ R+L +R AFV F MA+SAI +
Sbjct: 146 RKLFVGMISKKCNENDIRLMF-SPYGQIEECRILRGPDGLSRCAFVTFTARQMAQSAIKS 204
Query: 333 LNCSGAVLG-SLPIRV 347
++ S + G S PI V
Sbjct: 205 MHQSQTMEGCSSPIVV 220
>gi|170034902|ref|XP_001845311.1| heterogeneous nuclear ribonucleoprotein r [Culex quinquefasciatus]
gi|167876604|gb|EDS39987.1| heterogeneous nuclear ribonucleoprotein r [Culex quinquefasciatus]
Length = 542
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 25/177 (14%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSLA 238
V+ I + + E++L LF CG++ D R+ DP + +AFV FT + A A+
Sbjct: 181 VFCGKIPKDMYEDELIPLFEKCGKIWDLRLMMDPMTGTNRGYAFVTFTSRDAACNAVR-- 238
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDIKLFFE 297
V + +P P DE+ M + +Y N+ + ++ +K FE
Sbjct: 239 ---------EVWGCDIIVDWADPQEEP---DEQTMSKVKVLYVRNLTQDTSEEKLKESFE 286
Query: 298 SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSPSKTP 353
+ G+V+R++ + DY AFV F + A+ A+ + G + I VS +K P
Sbjct: 287 AF-GKVERVKKIKDY------AFVHFEDRDHAVNAMKDLDGKDINGSAIEVSLAKPP 336
>gi|342878966|gb|EGU80243.1| hypothetical protein FOXB_09170 [Fusarium oxysporum Fo5176]
Length = 1079
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 19/163 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
TVYV++ ++ + LF CG+++ R+ ++ RF +V F D+E + A+
Sbjct: 678 TVYVANYPPAADQKYIRDLFKDCGEILSIRLPSLKVDARRRFCYVSFRDQEASAKAVKKD 737
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC---SRTIYCTNIDKKVTQGDIKLF 295
GT+L + + + P + RE R I+ +N+D+ T+ D+K
Sbjct: 738 GTVL----------EGGLKLLAKYSDPSHKKAREGALAEGREIHISNLDRTATEADLKEV 787
Query: 296 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAM---AESAIAALN 334
F S G V R+ L + T+ AF++FA AE A+A +N
Sbjct: 788 F-SKYGNVTRVNLPRNLVGKTKGFAFIDFATKEEAEKAVAEMN 829
>gi|401409876|ref|XP_003884386.1| hypothetical protein NCLIV_047860 [Neospora caninum Liverpool]
gi|325118804|emb|CBZ54355.1| hypothetical protein NCLIV_047860 [Neospora caninum Liverpool]
Length = 763
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 96/220 (43%), Gaps = 26/220 (11%)
Query: 137 HTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLA 196
HT G AN +G + +R N + A + ++YV D+ Q VTE L
Sbjct: 46 HTAGNANVSGGGVS----GTAPPAGQRPNGLNAAASAANFVSPSLYVGDLHQDVTEAMLF 101
Query: 197 TLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSK 253
+F + G V R+C D L +A+V + + A +L +L T++ P R++
Sbjct: 102 EVFNSVGPVTSIRVCRDTVTRRSLGYAYVNYQGIQDAERSLDTLNYTVIKGQPCRIM--- 158
Query: 254 TAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGD 311
+ R R+ + I+ N+DK + D K ++ S+ G + ++ D
Sbjct: 159 ---------WCHRDPSLRKSGNGNIFVKNLDKNI---DNKALYDTFSLFGNILSCKVAVD 206
Query: 312 YQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 349
HS FV + ESA +A++ +G ++G + V P
Sbjct: 207 ENGHSKGYGFVHYENEESARSAIDKVNGMLIGGKTVYVGP 246
>gi|357168503|ref|XP_003581679.1| PREDICTED: uncharacterized protein LOC100838448 [Brachypodium
distachyon]
Length = 741
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 76/182 (41%), Gaps = 18/182 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSL 237
+T++V ++ V EQ+ F +VVD R + S FA VEF E A L
Sbjct: 473 KTLFVGNLSYSVGIEQVKEFFQEVAEVVDVRFATFEDGSSKGFAHVEFATTEAVHKAREL 532
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRS-------EDEREMCSRTIYCTNIDKKVTQG 290
G L PVR+ +A + P S + + S T + D + +
Sbjct: 533 NGHDLMGRPVRL-----DLARERGAYTPGSGRDNSSFKKPGQSSSNTAFIRGFDASLGED 587
Query: 291 DIKLFFES---VCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAVLGSLPI 345
I+ + CGE+ R+ + DY+ S IA++EF+ S A SG+ LG +
Sbjct: 588 QIRSSLQKHFGSCGEITRVSIPKDYETGASKGIAYMEFSDQSSLSKAFELSGSDLGGFSL 647
Query: 346 RV 347
V
Sbjct: 648 YV 649
>gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis thaliana]
Length = 390
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 19/193 (9%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTC-GQVVDCRICGDPNS--VLRFAFVEFTDE- 228
Q E T++V D+ +VT+ L+ F G V ++ D + + FV F DE
Sbjct: 148 QTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADEN 207
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIA-PVNPTFLPRSE----DEREMCSRTIYCTNI 283
E RA + G P+R+ P+ A P+ P ++ + + + TI+ +
Sbjct: 208 EQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGANAGDNDPNNTTIFVGGL 267
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF---AMAESAIAALNCSGAVL 340
D VT ++K F GE+ +++ R FV++ A AE A++ LN G L
Sbjct: 268 DANVTDDELKSIFGQF-GELLHVKI----PPGKRCGFVQYANKASAEHALSVLN--GTQL 320
Query: 341 GSLPIRVSPSKTP 353
G IR+S ++P
Sbjct: 321 GGQSIRLSWGRSP 333
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVE 224
N + +NA ++ T++V +D VT+++L ++F G+++ +I P R FV+
Sbjct: 246 NTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKI--PPGK--RCGFVQ 301
Query: 225 FTDEEGARAALS-LAGTMLGFYPVRV 249
+ ++ A ALS L GT LG +R+
Sbjct: 302 YANKASAEHALSVLNGTQLGGQSIRL 327
>gi|294877113|ref|XP_002767904.1| protein HSH49, putative [Perkinsus marinus ATCC 50983]
gi|239869872|gb|EER00622.1| protein HSH49, putative [Perkinsus marinus ATCC 50983]
Length = 289
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 23/177 (12%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR + +D +RR+ VYV ++D+ + + L F G ++ C++ P+ R F
Sbjct: 120 CRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVALTPDGKSRGF 179
Query: 221 AFVEFTDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--- 276
FV F +E A AA++ L G +G V V K ++ D + +
Sbjct: 180 GFVHFESDESAEAAIAKLNGMQIGEKTVYVAQFK------------KTADRSDGSPKNFT 227
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 333
+Y +I T+ I+ F + GE+ + D R AFV FA E A AA+
Sbjct: 228 NVYIKHIPPSWTEEKIREEFGAF-GEITSFAMQTD-PKGRRFAFVNFAEFEQARAAV 282
>gi|146090988|ref|XP_001466413.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|134070775|emb|CAM69132.1| putative RNA-binding protein [Leishmania infantum JPCM5]
Length = 449
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 79/190 (41%), Gaps = 21/190 (11%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE 229
+A + + V +S I T QL +F CG + D + AFV +T EE
Sbjct: 129 SADAERTSKNKVVISSIYPHTTRAQLREVFSPCGAICDFHLI----PTRHMAFVGYTTEE 184
Query: 230 GARAALSLAGTMLGFYPVRVLPSKT---AIAPV---------NPTFLPRSEDEREMCSRT 277
AL L G M+ PV V P A AP N + + R++ R
Sbjct: 185 ACEKALKLDGAMVNGNPVVVRPCPPRDDAPAPASRRDATRRGNESTTASAPSRRQLDVRV 244
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSG 337
+ + VT+ ++ FF CG + + + + +AFV F AE+A A++ SG
Sbjct: 245 VV-HGVPSDVTKEALRAFFSPDCGSLTDVFI----KPEIGVAFVAFTSAENAKRAISKSG 299
Query: 338 AVLGSLPIRV 347
+L +R+
Sbjct: 300 EMLMGTRVRI 309
>gi|158285093|ref|XP_560351.3| AGAP003899-PA [Anopheles gambiae str. PEST]
gi|98986313|tpe|CAJ55784.1| TPA: sex-lethal [Anopheles gambiae]
gi|157020733|gb|EAL41988.3| AGAP003899-PA [Anopheles gambiae str. PEST]
Length = 302
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 183 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV---LRFAFVEFTDEEGARAALSLAG 239
V+ + Q +TE ++ ++F G + CR+ D F FV + +EE A+ A+
Sbjct: 108 VNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTGYSYGFGFVNYLNEEAAQRAIKC-- 165
Query: 240 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 299
L YP+R K + A P+S+D +E +Y TN+ + +T+ + + F
Sbjct: 166 --LNGYPLRNKRLKVSYA------RPQSDDIKET---NLYITNLPRTITEEQLDIIFGKY 214
Query: 300 CGEVQRLRLLGDYQHSTR-IAFVEF---AMAESAIAALN 334
VQ+ L R +AFV F A+ AI+ALN
Sbjct: 215 GTIVQKNILRDKLTGQPRGVAFVRFNKREEAQEAISALN 253
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 155 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC-----R 209
NGY +R+ + Q D++ +Y++++ + +TEEQL +F G +V +
Sbjct: 167 NGYPLRNKRLKVSYARPQSDDIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNILRDK 226
Query: 210 ICGDPNSVLRFAFVEFTDEEGARAALS 236
+ G P V AFV F E A+ A+S
Sbjct: 227 LTGQPRGV---AFVRFNKREEAQEAIS 250
>gi|367008356|ref|XP_003678678.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
gi|359746335|emb|CCE89467.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
Length = 588
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 15/173 (8%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDE 228
+Q+ E ++YV ++D V+E L +F G V R+C D + L +A+V F D
Sbjct: 34 SQKVETSSASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDH 93
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
E + A+ L + P++ +P + + +P+ R+ S I+ N+ +
Sbjct: 94 EAGKTAIE----KLNYAPIKGVPCRIMWSQRDPSM-------RKKGSGNIFIKNLHPDID 142
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
+ F SV G + ++ D ++R FV F E+A A++ +L
Sbjct: 143 NKALHDTF-SVFGNILSCKIATDEAGNSRGFGFVHFEDDEAAKEAIDAINGML 194
>gi|255538240|ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550886|gb|EEF52372.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 658
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D VT+ QL +F GQVV R+C D + L + +V +T + A AL +
Sbjct: 38 SLYVGDLDLNVTDSQLYDVFNQVGQVVSVRVCRDLTTRRSLGYGYVNYTSPQDAARALDI 97
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L F P P + + +P+ R+ + I+ N+DK + + F
Sbjct: 98 ----LNFTPFNNKPIRIMYSHRDPSI-------RKSGTGNIFIKNLDKTIDHKALHDTFS 146
Query: 298 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
S G + ++ D +R FV+F E+A A++ +L
Sbjct: 147 SF-GNILSCKVATDSSGQSRGYGFVQFDNEEAAQNAIDKLNGML 189
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 21/177 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D IR++ +++ ++D+ + + L F + G ++ C++ D + R +
Sbjct: 108 IRIMYSHRDPSIRKSGTGNIFIKNLDKTIDHKALHDTFSSFGNILSCKVATDSSGQSRGY 167
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--T 277
FV+F +EE A+ A+ L G +L V V FL + E + +
Sbjct: 168 GFVQFDNEEAAQNAIDKLNGMLLNDKQVYV-----------GHFLRKHERDSASNKKFNN 216
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
+Y N+ + T+ D+K F GE+ ++ D ++ FV F ++A A+
Sbjct: 217 VYVKNLSESTTEEDLKNIFGE-YGEITSAVIMRDADGKSKCFGFVNFENTDAAAKAV 272
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D +++E L LF G + C++ DP+ + R + FV F T EE +RA +
Sbjct: 320 LYIKNLDDSISDENLKELFSDFGMITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEMN 379
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 380 GKMVVSKPLYV 390
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 31/187 (16%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSLA 238
VYV ++ + TEE L +F G++ I D + + F FV F + + A+A SL
Sbjct: 217 VYVKNLSESTTEEDLKNIFGEYGEITSAVIMRDADGKSKCFGFVNFENTDAAAKAVESLN 276
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR---------------TIYCTNI 283
G + V ++ +SE E E+ S+ +Y N+
Sbjct: 277 GKKIDDKEWYVGKAQK-----------KSERELELKSQFEQSMKEAVDKYQGVNLYIKNL 325
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLG 341
D ++ ++K F S G + +++ D +R FV F+ E A AL +G ++
Sbjct: 326 DDSISDENLKELF-SDFGMITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEMNGKMVV 384
Query: 342 SLPIRVS 348
S P+ V+
Sbjct: 385 SKPLYVA 391
>gi|121702907|ref|XP_001269718.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
gi|158512635|sp|A1CRM1.1|PABP_ASPCL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119397861|gb|EAW08292.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
Length = 754
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 16/177 (9%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 122 CRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGY 181
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE--DEREMCSRTI 278
FV + E A A+ ML L K + + R DE + I
Sbjct: 182 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFDEMKANFTNI 234
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 334
Y NID VT+ + + FE GE+ L D + +R FV ++ ESA AA++
Sbjct: 235 YIKNIDPDVTEEEFRKIFEQF-GEITSATLSRDPEGKSRGFGFVNYSTHESAQAAVD 290
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 52 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 111
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 112 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDSAIDNKALHDTF 159
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 160 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGML 203
>gi|395335144|gb|EJF67520.1| hypothetical protein DICSQDRAFT_164378 [Dichomitus squalens
LYAD-421 SS1]
Length = 395
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 33/217 (15%)
Query: 163 RMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR- 219
R+N Q +D V+V D+ +V ++ LA F G + D R+ D NS
Sbjct: 59 RVNWAYQGQQNKEDTSNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSR 118
Query: 220 -FAFVEFTDEEGARAAL-SLAGTMLGFYPVRV-------------LPSKTAI-----APV 259
+ F+ F D+ A A+ ++ G LG +RV P +T + AP+
Sbjct: 119 GYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPAGPPRTGMGGGAPAPM 178
Query: 260 NPTFLPRSED----EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 315
N P S + + + T+Y N+ TQ D+ F+S+ G + +R+ D
Sbjct: 179 NFQGGPLSYESVVQQTPAYNTTVYVGNLVPYATQADLIPLFQSI-GYLSEIRMQAD---- 233
Query: 316 TRIAFVEFAMAE-SAIAALNCSGAVLGSLPIRVSPSK 351
AFV+ E +A+A + G ++ PI+ S K
Sbjct: 234 RGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGK 270
>gi|449494063|ref|XP_004159436.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN--SVLRFAFVEFTDEEGARAALSL 237
++YV D+DQ V E QL LF QVV R+C D L +A+V F+ + A A+
Sbjct: 36 SLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAME- 94
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L F PV P + I+ +P+ R+ ++ N+D + ++ F
Sbjct: 95 ---HLNFTPVNGKPIRIMISNRDPSI-------RKSGYANVFIKNLDLSIDNKALRDTF- 143
Query: 298 SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESA-IAALNCSGAVL 340
+ G V ++ D S FV+F ESA I+ +G +L
Sbjct: 144 AAFGTVLSCKVAVDSNGQSKGYGFVQFESEESAEISIEKLNGMLL 188
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 20/182 (10%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLA 238
VYV ++ + T++ L LF G + + D N + F FV F + + A AA+ L
Sbjct: 215 VYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLD 274
Query: 239 GTMLG----FYPVRVLPSKTAIAPVNPTFLPRSEDER-----EMCSRTIYCTNIDKKVTQ 289
GT+LG Y R A + F E ER ++ +Y N+D +
Sbjct: 275 GTVLGDDKTLYVGRAQRKAEREAELRAKF----EQERKSRFEKLQGANLYIKNLDDHIDD 330
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQH--STRIAFVEFAMAESAIAALN-CSGAVLGSLPIR 346
+K F S G + +++ D QH S FV F+ + A ALN +G + G P+
Sbjct: 331 EKLKELF-SEYGTITSCKVMLD-QHGLSKGSGFVAFSSPDEATKALNEMNGKMKGRKPLY 388
Query: 347 VS 348
V+
Sbjct: 389 VA 390
>gi|363894957|gb|AEW42987.1| putative polyadenylate-binding protein 1, partial [Haliotis
diversicolor]
Length = 563
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 81/186 (43%), Gaps = 20/186 (10%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA 221
R +Q+D +R++ V++ ++D+ + + L F G ++ C+I D N +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKIASDENGSKGYG 141
Query: 222 FVEFTDEEGARAALSLAGTML----GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT 277
FV F EE AR A+ ML Y + +P K IA + ++
Sbjct: 142 FVHFETEEAARQAIEKVNGMLLNGKKVYVGKFIPRKERIALLG---------DKMKRFNN 192
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NC 335
+Y N ++ I+ F+ G++ +++ D +R FV + E+A A+ N
Sbjct: 193 VYIKNFGDELDDDKIRELFDPF-GKIISAKVMTDEIGKSRGFGFVSYEEPEAAEKAVDNL 251
Query: 336 SGAVLG 341
+G LG
Sbjct: 252 NGMELG 257
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 69/167 (41%), Gaps = 22/167 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
++YV D+ VTE L F T G V+ R+C D L +A+V F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 238 AG--TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
T+ G P+R++ S+ R R+ ++ N+DK + D K
Sbjct: 72 MNFDTIKG-RPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKSI---DNKAL 115
Query: 296 FE--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 340
++ S G + ++ D S FV F E+A A+ +L
Sbjct: 116 YDTFSAFGNILSCKIASDENGSKGYGFVHFETEEAARQAIEKVNGML 162
>gi|386780450|dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 657
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D++ VT+ QL LF GQVV R+C D ++ L + +V +++ A A+
Sbjct: 39 SLYVGDLEFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPNDASRAME- 97
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
ML F PV + + +PT R+ S I+ N+DK + + F
Sbjct: 98 ---MLNFTPVNGKSIRVMYSHRDPTL-------RKSGSANIFIKNLDKSIDNKALHDTFS 147
Query: 298 SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVL 340
S G + ++ D S FV++ ESA A++ +L
Sbjct: 148 SF-GNILSCKIATDSNGQSKGYGFVQYDNEESAQGAIDKLNGML 190
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF 225
+T+ D+ +YV ++D + +E+L LF G + C++ DP+ + R + FV F
Sbjct: 308 QTAKEAVDKYQGLNLYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDPSGISRGSGFVAF 367
Query: 226 -TDEEGARAALSLAGTMLGFYPVRV 249
T EE +RA + G M+ P+ V
Sbjct: 368 STSEEASRALSEMNGKMIVSKPLYV 392
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 165 NCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR- 219
+ R + +D +R++ +++ ++D+ + + L F + G ++ C+I D N +
Sbjct: 108 SIRVMYSHRDPTLRKSGSANIFIKNLDKSIDNKALHDTFSSFGNILSCKIATDSNGQSKG 167
Query: 220 FAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--- 275
+ FV++ +EE A+ A+ L G ++ V V FL + E E
Sbjct: 168 YGFVQYDNEESAQGAIDKLNGMLMNDKQVYV-----------GHFLRKQERESTTGMTKF 216
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 334
+ +Y N+ + T ++K F G + ++ D ++ F+ F AE A A+
Sbjct: 217 QNVYVKNLSESTTDDELKKVFGEF-GNITSAVVMRDADGKSKCFGFINFETAEDAAKAVE 275
Query: 335 C 335
Sbjct: 276 S 276
>gi|242020567|ref|XP_002430724.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212515914|gb|EEB17986.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 470
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
IRRTV ++++D+ + + + LF G+V R C P +A VEFTD+ AAL
Sbjct: 151 IRRTVVITNLDRSIGSQNVIELFSKAGEVKYVRFCFRPGDTANYALVEFTDQTSIIAALK 210
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNP 261
+ G L ++V S AI P
Sbjct: 211 MNGMQLAGNTIKVYHSIQAIVKPQP 235
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 11/126 (8%)
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAIA-----PVNPTFLPRSEDEREM--CSRTIYCTN 282
G + A + + GF P +VL + P+ P LP + D + RT+ TN
Sbjct: 101 GPKLAPGVTNQLEGFPPNQVLVTHDPRLIEHNLPLYPP-LPSNTDSNTLDEIRRTVVITN 159
Query: 283 IDKKV-TQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLG 341
+D+ + +Q I+LF S GEV+ +R + A VEF S IAAL +G L
Sbjct: 160 LDRSIGSQNVIELF--SKAGEVKYVRFCFRPGDTANYALVEFTDQTSIIAALKMNGMQLA 217
Query: 342 SLPIRV 347
I+V
Sbjct: 218 GNTIKV 223
>gi|358332953|dbj|GAA51534.1| squamous cell carcinoma antigen recognized by T-cells 3 [Clonorchis
sinensis]
Length = 898
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 19/194 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
RTV+VS++D TE+ L F CG++ R+ D + +A+VEF A AL
Sbjct: 626 RTVFVSNLDYSTTEDDLRRTFEECGKLSSVRLVRDYAGRSKGYAYVEFEQASAADVALKK 685
Query: 238 AGTMLGFYPV-RVLPS-KTAIAPVNPTFLPRSEDEREMCS-----------RTIYCTNID 284
+G PS + P F+ R + R S ++ N+D
Sbjct: 686 DRQPIGPSAASEATPSTDDTMTIARPMFVSRCDPNRSKSSGFQYSAGKLEPEKLFVRNLD 745
Query: 285 KKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI--AFVEFAMAESAIAALNCS-GAVLG 341
K+VT ++ F G V +R + Y++ A+VEFA A+ A AL + G ++G
Sbjct: 746 KRVTAHALEQLF-GEHGTVVSVR-IATYRNGAPKGHAYVEFANADQASRALVATDGLLVG 803
Query: 342 SLPIRVSPSKTPVR 355
S I V+ S PVR
Sbjct: 804 SKNIAVAISNPPVR 817
>gi|428174818|gb|EKX43711.1| hypothetical protein GUITHDRAFT_163728 [Guillardia theta CCMP2712]
Length = 501
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 8/177 (4%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 236
RT++V+ + ++ E L F G+VVD RI D + A+VEF +E AA+
Sbjct: 154 RTIFVAQVARKADERDLFQFFSEAGKVVDVRIIKDTQTRRSKGIAYVEFEKQEQCVAAVQ 213
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+G +L +PV V+ + A + E ++ ++ + N+ + + D++ F
Sbjct: 214 KSGQLLCGFPV-VVQASQAEKNQAARLAAQVAGELDLPAK-LQVDNLHMDIAEDDLQTLF 271
Query: 297 ESVCGEVQRLRLLGDYQHSTRIAFVEFAM---AESAIAALNCSGAVLGSLPIRVSPS 350
S G+V +R+ ++ ST VEF A+ A+A LN +L +R+ S
Sbjct: 272 -SPFGKVLSVRINKEHGRSTGKGVVEFKTLQDAQKAVAHLNGFDLAGKALNVRIIQS 327
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 270 EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAE 327
+R+M RTI+ + +K + D+ FF S G+V +R++ D Q S IA+VEF E
Sbjct: 150 DRDM--RTIFVAQVARKADERDLFQFF-SEAGKVVDVRIIKDTQTRRSKGIAYVEFEKQE 206
Query: 328 SAIAALNCSGAVLGSLPIRVSPSKT 352
+AA+ SG +L P+ V S+
Sbjct: 207 QCVAAVQKSGQLLCGFPVVVQASQA 231
>gi|449446375|ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN--SVLRFAFVEFTDEEGARAALSL 237
++YV D+DQ V E QL LF QVV R+C D L +A+V F+ + A A+
Sbjct: 36 SLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAME- 94
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L F PV P + I+ +P+ R+ ++ N+D + ++ F
Sbjct: 95 ---HLNFTPVNGKPIRIMISNRDPSI-------RKSGYANVFIKNLDLSIDNKALRDTF- 143
Query: 298 SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESA-IAALNCSGAVL 340
+ G V ++ D S FV+F ESA I+ +G +L
Sbjct: 144 AAFGTVLSCKVAVDSNGQSKGYGFVQFESEESAEISIEKLNGMLL 188
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 20/182 (10%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLA 238
VYV ++ + T++ L LF G + + D N + F FV F + + A AA+ L
Sbjct: 215 VYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLD 274
Query: 239 GTMLG----FYPVRVLPSKTAIAPVNPTFLPRSEDER-----EMCSRTIYCTNIDKKVTQ 289
GT+LG Y R A + F E ER ++ +Y N+D +
Sbjct: 275 GTVLGDDKTLYVGRAQRKAEREAELKAKF----EQERKSRFEKLQGANLYIKNLDDHIDD 330
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQH--STRIAFVEFAMAESAIAALN-CSGAVLGSLPIR 346
+K F S G + +++ D QH S FV F+ + A ALN +G + G P+
Sbjct: 331 EKLKELF-SEYGTITSCKVMLD-QHGLSKGSGFVAFSSPDEATKALNEMNGKMKGRKPLY 388
Query: 347 VS 348
V+
Sbjct: 389 VA 390
>gi|328772736|gb|EGF82774.1| hypothetical protein BATDEDRAFT_22908 [Batrachochytrium
dendrobatidis JAM81]
Length = 961
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 88/179 (49%), Gaps = 20/179 (11%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGT 240
+YVS++ Q+ + QL +F G++ + R+ + FA+++F EE A +L +
Sbjct: 699 IYVSNLSPQMQKRQLRHIFSEFGKIREIRLQN--RKTMAFAYIDFEKEEDAIKSLKMNQA 756
Query: 241 MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVC 300
++ + K +A +PT + ++ + +Y +N+ +T+ D++ F S
Sbjct: 757 VIE----KTGDRKIGVAISDPT------KKMQIDHKKLYVSNLSHTMTEDDLQELF-SKF 805
Query: 301 GEVQRLRLL----GDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR 355
GE+ LR++ G+ S IAFVE+ + A A+ +G ++ I VS S +R
Sbjct: 806 GEISALRVVRMPNGN---SKGIAFVEYNQEDHAKEAMTLNGTMVDGRLIVVSVSDPNLR 861
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 160 GKRRMNCRTSN-AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL 218
G R++ S+ ++ ++ + +YVS++ +TE+ L LF G++ R+ PN
Sbjct: 762 GDRKIGVAISDPTKKMQIDHKKLYVSNLSHTMTEDDLQELFSKFGEISALRVVRMPNGNS 821
Query: 219 R-FAFVEFTDEEGARAALSLAGTML 242
+ AFVE+ E+ A+ A++L GTM+
Sbjct: 822 KGIAFVEYNQEDHAKEAMTLNGTMV 846
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA-----L 235
VY+S + Q TE + F GQV D + + S AFVEF+ E R +
Sbjct: 610 VYLSKLSQNTTESTILKHFGVYGQVEDLFMQPNEESGELEAFVEFSKAELVRKIVLDGPI 669
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
S+ GT++ P R PS+ F E + IY +N+ ++ + ++
Sbjct: 670 SINGTVVT--PCRCRPSQMVW-----DFKQHEEKTK------IYVSNLSPQMQKRQLRHI 716
Query: 296 FESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 340
F S G+++ +RL + + A+++F E AI +L + AV+
Sbjct: 717 F-SEFGKIREIRLQN--RKTMAFAYIDFEKEEDAIKSLKMNQAVI 758
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
gi|297324519|gb|EFH54939.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAAL-S 236
++YV D+D VT+ QL F QVV R+C D N+ L + +V +++ E A A+
Sbjct: 42 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTEDAEKAMQK 101
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L + L +R+ T+ R R ++ N+DK V + F
Sbjct: 102 LNYSTLNGKMIRI------------TYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHETF 149
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
S CG + ++ D+ +R FV+F +SA A+ +G VL I V P
Sbjct: 150 -SGCGTIVSCKVAADHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGP 203
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFT-DEEGARAALSLA 238
+YV ++D VT+E+L LF G + C++ DP+ + + FV F+ E +R +
Sbjct: 325 LYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMN 384
Query: 239 GTMLGFYPVRV 249
G M+G P+ V
Sbjct: 385 GKMVGGKPLYV 395
>gi|168036104|ref|XP_001770548.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678256|gb|EDQ64717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 645
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAA 234
+ ++YV D++ V+E QL +F GQVV R+C D L +A+V + + + A A
Sbjct: 22 VSTSLYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNYNNAQDATRA 81
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L L L F V P + + +P+ R+ + I+ N+DK + +
Sbjct: 82 LEL----LNFNAVNGKPIRIMFSHRDPSI-------RKSGTANIFIKNLDKSIDNKALHD 130
Query: 295 FFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
F + G + ++ D S FV+F ESA A+ +G +L + V P
Sbjct: 131 TF-AAFGTILSCKVATDPSGQSKGYGFVQFEQEESAQTAIEKVNGMLLNDKQVFVGP 186
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTD-EEGARAALSLA 238
+Y+ ++D + +E+L +F G +V C++ DP R + FV F+ +E RA +
Sbjct: 308 LYLKNLDDTIDDEKLREIFSEYGTIVSCKVMRDPQGQSRGSGFVAFSSPDEATRAVTEMN 367
Query: 239 GTMLGFYPVRV----------------LPSKTAIAPVNPTFLP 265
G M+G P+ V +T + P PT LP
Sbjct: 368 GKMVGSKPLYVALAQRKEERRNRLQAAFAQRTPVGPAVPTSLP 410
>gi|115686233|ref|XP_784135.2| PREDICTED: splicing factor 3B subunit 4-like [Strongylocentrotus
purpuratus]
Length = 425
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 22/163 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++VTE L LFL G VV+ + D S + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVTEALLWELFLQAGPVVNTHMPKDRVTQSHQGYGFVEFMGEEDADYAIKV 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y PVRV + S ++ + I+ N+D ++ + +
Sbjct: 74 L-NMIKLYGKPVRVNKA--------------SAHQKNLDVGANIFIGNLDPEIDEKLLYD 118
Query: 295 FFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNC 335
F + +Q +++ D + +S AF+ FA E+A AA+
Sbjct: 119 TFSAFGVILQTPKIMRDVESGNSKGYAFINFASFEAADAAIEA 161
>gi|346466155|gb|AEO32922.1| hypothetical protein [Amblyomma maculatum]
Length = 502
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL--RFAFVEFTDEEGARAALSL 237
TV+V ++ +V +E+L T F CG V R+ D + + F FV F + +GA AL +
Sbjct: 338 TVFVGNLPHEVQDEELWTFFADCGDVTSVRLIRDKGTGMGKGFGFVTFKNRDGAALALEM 397
Query: 238 AGTMLGFYPVRVLP-SKTAIA 257
AG L PVRV SK A A
Sbjct: 398 AGRELCGRPVRVTEFSKQAAA 418
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 16/130 (12%)
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYC 280
A+V + + E + AL+L GT+ VL + V T SE S T++
Sbjct: 295 AYVVYREREAVKKALALNGTV-------VLGKHIRVDVVGDTKPQASE------SHTVFV 341
Query: 281 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAMAESAIAALNCSGA 338
N+ +V ++ FF CG+V +RL+ D FV F + A AL +G
Sbjct: 342 GNLPHEVQDEELWTFFAD-CGDVTSVRLIRDKGTGMGKGFGFVTFKNRDGAALALEMAGR 400
Query: 339 VLGSLPIRVS 348
L P+RV+
Sbjct: 401 ELCGRPVRVT 410
>gi|336364894|gb|EGN93247.1| hypothetical protein SERLA73DRAFT_172163 [Serpula lacrymans var.
lacrymans S7.3]
Length = 684
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 15/186 (8%)
Query: 157 YSQGKRRMNCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 212
YS K R CR +Q+D +R+T +++ ++D+Q+ + L F G V+ C++
Sbjct: 107 YSLIKNRA-CRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVAT 165
Query: 213 DPNSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
D + + + FV + E A A+ ML L K + + R
Sbjct: 166 DEHGRSKGYGFVHYETGEAAETAIKAVNGML-------LNDKKVYVGYHISRKERQSKLD 218
Query: 272 EMCSR--TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESA 329
EM ++ +Y N+D VTQ + + F+ + + + +S FV + E A
Sbjct: 219 EMKAQFTNLYIKNLDTSVTQDEFEEMFQKYGNVTSAIVQVDEEGNSKGFGFVNYEHHEEA 278
Query: 330 IAALNC 335
+A++
Sbjct: 279 QSAVDA 284
>gi|347970878|ref|XP_003436655.1| AGAP003899-PB [Anopheles gambiae str. PEST]
gi|333466414|gb|EGK96234.1| AGAP003899-PB [Anopheles gambiae str. PEST]
Length = 280
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 183 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV---LRFAFVEFTDEEGARAALSLAG 239
V+ + Q +TE ++ ++F G + CR+ D F FV + +EE A+ A+
Sbjct: 86 VNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTGYSYGFGFVNYLNEEAAQRAIKC-- 143
Query: 240 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 299
L YP+R K + A P+S+D +E +Y TN+ + +T+ + + F
Sbjct: 144 --LNGYPLRNKRLKVSYA------RPQSDDIKET---NLYITNLPRTITEEQLDIIFGKY 192
Query: 300 CGEVQRLRLLGDYQHSTR-IAFVEF---AMAESAIAALN 334
VQ+ L R +AFV F A+ AI+ALN
Sbjct: 193 GTIVQKNILRDKLTGQPRGVAFVRFNKREEAQEAISALN 231
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 155 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC-----R 209
NGY +R+ + Q D++ +Y++++ + +TEEQL +F G +V +
Sbjct: 145 NGYPLRNKRLKVSYARPQSDDIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNILRDK 204
Query: 210 ICGDPNSVLRFAFVEFTDEEGARAALS 236
+ G P V AFV F E A+ A+S
Sbjct: 205 LTGQPRGV---AFVRFNKREEAQEAIS 228
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTD-EEGARAALS 236
++YV D+D VT+ QL F G VV R+C D + L + +V FT+ ++ ARA
Sbjct: 37 SLYVGDLDVNVTDSQLFDAFSQMGPVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAIQE 96
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L L P+RV+ S R R + I+ N+D+ + + F
Sbjct: 97 LNYIPLYGKPIRVMYSH------------RDPSVRRSGAGNIFIKNLDESIDHKALHDTF 144
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
SV G + ++ D S FV++A ESA A+ +G +L + V P
Sbjct: 145 -SVFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGP 198
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 24/164 (14%)
Query: 126 NGFGYTN--NFIMHTDGTANTNGHTTTRRKRN-GYSQGK--RRMNCRTSNAQQ-----DE 175
GFG+ N N + NGH ++ G +Q K R R Q D+
Sbjct: 255 KGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADK 314
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTDEEGARAA 234
+YV ++D +++E+L +F G V C++ DPN + + FV F+ E A A
Sbjct: 315 FQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSCKVMRDPNGTSKGSGFVAFSTPEEATEA 374
Query: 235 LS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT 277
+S L+G M+ P+ V AIA R ED R S+
Sbjct: 375 MSQLSGKMIESKPLYV-----AIA-------QRKEDRRAQFSQV 406
>gi|170084123|ref|XP_001873285.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650837|gb|EDR15077.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 39/223 (17%)
Query: 163 RMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR- 219
R+N Q +D V+V D+ +V +E LA F G + D R+ D NS
Sbjct: 84 RVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAFSAFGTMSDARVMWDMNSGKSR 143
Query: 220 -FAFVEFTDEEGARAAL-SLAGTMLGFYPVRV------------------------LPSK 253
+ F+ F D+ A A+ ++ G LG +RV + +
Sbjct: 144 GYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPTTTASSPRPGGAVTTG 203
Query: 254 TAIAPVNPTFLPRSED----EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL 309
+A AP+N P S + + + T+Y N+ TQ D+ F+S+ G + +R+
Sbjct: 204 SAPAPINFQGGPLSYESVVQQTPAYNSTVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQ 262
Query: 310 GDYQHSTRIAFVEFAMAE-SAIAALNCSGAVLGSLPIRVSPSK 351
D AFV+ E +A+A + G ++ PI+ S K
Sbjct: 263 AD----RGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGK 301
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 73/179 (40%), Gaps = 22/179 (12%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGARAA 234
R +YV ++ +VTE L +F G V +I D N L + FVE+ D A A
Sbjct: 10 RAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETA 69
Query: 235 L-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L +L G + +R VN + + E ++ ++ +V +
Sbjct: 70 LQTLNGRKIFDTEIR----------VNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEVLA 119
Query: 294 LFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
F S G + R++ D +AF + AE AIA +N G LGS IRV
Sbjct: 120 KAF-SAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMN--GEWLGSRAIRV 175
>gi|118350408|ref|XP_001008485.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila]
gi|89290252|gb|EAR88240.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila SB210]
Length = 325
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 34/181 (18%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDC-----RICGDPNSVLRFAFVEFTDEEGARAA 234
T+YV +DQ+VT+E L LF CG V++ +I G+ + FVE+ EE A A
Sbjct: 13 TLYVGGLDQKVTQEVLWELFSQCGIVINVHLPRDKITGEHQG---YGFVEYKTEEDADYA 69
Query: 235 LSLAGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDER-EMCSRTIYCTNIDKKVTQGD 291
+ + ++ Y P++V + S+D+R + I+ N+D VT+
Sbjct: 70 IKIL-HLIKLYGKPIKVNKA--------------SQDKRTQEVGANIFIGNLDPSVTEMQ 114
Query: 292 IKLFFESVCGEVQRLRLL--GDYQHSTRIAFVE---FAMAESAIAALNCSGAVLGSLPIR 346
++ F S G + R++ D S AF+ F +++AI+A+N G GS I
Sbjct: 115 LQETF-STFGLIIGRRIVRDSDNNQSKGYAFISYDNFESSDNAISAMN--GQYYGSQKIS 171
Query: 347 V 347
V
Sbjct: 172 V 172
>gi|398017732|ref|XP_003862053.1| RNA-binding protein, putative [Leishmania donovani]
gi|322500281|emb|CBZ35359.1| RNA-binding protein, putative [Leishmania donovani]
Length = 403
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 79/190 (41%), Gaps = 21/190 (11%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE 229
+A + + V +S I T QL +F CG + D + AFV +T EE
Sbjct: 129 SADAERTSKNKVVISSIYPHTTRAQLREVFSPCGAICDFHLI----PTRHMAFVGYTTEE 184
Query: 230 GARAALSLAGTMLGFYPVRVLPSKT---AIAPV---------NPTFLPRSEDEREMCSRT 277
AL L G M+ PV V P A AP N + + R++ R
Sbjct: 185 ACEKALKLDGAMVNGNPVVVRPCPPRDDAPAPASRRDATRRGNESTTASAPSRRQLDVRV 244
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSG 337
+ + VT+ ++ FF CG + + + + +AFV F AE+A A++ SG
Sbjct: 245 VV-HGVPSDVTKEALRAFFSPDCGPLTDVFI----KPEIGVAFVAFTSAENAKRAISKSG 299
Query: 338 AVLGSLPIRV 347
+L +R+
Sbjct: 300 EMLMGTRVRI 309
>gi|168018573|ref|XP_001761820.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686875|gb|EDQ73261.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 16/179 (8%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGAR 232
+ + ++YV D++ V+E QL +F GQVV R+C D L +++V + + + A
Sbjct: 20 QFVSTSLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRDLITRRSLGYSYVNYNNAQDAT 79
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL L L F V P + + +P+ R+ + I+ N+DK + +
Sbjct: 80 RALEL----LNFTGVNGKPIRIMFSHRDPSI-------RKSGTANIFIKNLDKSIDNKAL 128
Query: 293 KLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
F + G + ++ D S FV+F ESA A+ +G +L + V P
Sbjct: 129 HDTF-AAFGNILSCKVATDASGQSKGYGFVQFEQEESAQNAIEKVNGMLLNDKQVFVGP 186
>gi|358346231|ref|XP_003637173.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355503108|gb|AES84311.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 622
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 79/180 (43%), Gaps = 16/180 (8%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN-SVLRFAFVEFTDEEGARAAL-SLA 238
VYV ++ + T E L LF T G + +I D N + RF FV F + A A+ L
Sbjct: 202 VYVKNLSESYTNEDLKQLFNTFGVITSVKIMKDENGNSKRFGFVNFQSSDSAATAVEKLN 261
Query: 239 GTMLG----FYPVRVLPSKTAIAPVNPTF----LPRSEDEREMCSRTIYCTNIDKKVTQG 290
G+ + R A + F L R E + +Y NIDK + +
Sbjct: 262 GSTTNDGKVLFVGRAQKKSEREAELKAFFEQEKLKRYE---KFQGANLYLKNIDKSLNEE 318
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 348
+K F S G + +++ D + ++ + FV F E A A++ +G ++G P+ VS
Sbjct: 319 KLKELF-SEFGTITSCKVMSDARGRSKGVGFVAFTTPEEASKAIDEMNGKIIGQKPVYVS 377
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D +IR+T +++ +++ + + L F G V+ C++ D N +
Sbjct: 96 IRIMFSHRDPLIRKTGFANLFIKNLETSIDNKALHETFSVFGNVLSCKVAMDSNGHSKGH 155
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 279
FV+F +++ A+ A+ L G ++ V V + R ++ +Y
Sbjct: 156 GFVQFDNDQSAKNAIEKLDGRLMNDKKVYV------------GYFVRCQERSSPKFTNVY 203
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL 333
N+ + T D+K F + G + ++++ D +S R FV F ++SA A+
Sbjct: 204 VKNLSESYTNEDLKQLFNTF-GVITSVKIMKDENGNSKRFGFVNFQSSDSAATAV 257
>gi|195434196|ref|XP_002065089.1| GK15272 [Drosophila willistoni]
gi|194161174|gb|EDW76075.1| GK15272 [Drosophila willistoni]
Length = 612
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALS 236
RTV+ + Q+V L F + G+V D R+ C A++EF D E AL
Sbjct: 255 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRMITCNKTKRFKGIAYIEFEDPESVSLALG 314
Query: 237 LAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L+G L P+ V + K + P F P+S +Y ++ +T+ ++
Sbjct: 315 LSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKS----HTGPMRLYVGSLHFNITEDMLR 370
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
FE G++ ++L+ D + S F+ + A+ A AL +G L P++V
Sbjct: 371 GIFEPF-GKIDVIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRPMKV 426
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 244 FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 303
+ P R P+ A PT L S +ER+ +RT++C + ++V D++ FF SV G+V
Sbjct: 227 YSPHRRSPNGGAGDRTPPTEL--SPEERD--ARTVFCIQLSQRVRARDLEEFFSSV-GKV 281
Query: 304 QRLRLL--GDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
+ +R++ + IA++EF ES AL SG L +PI V
Sbjct: 282 RDVRMITCNKTKRFKGIAYIEFEDPESVSLALGLSGQRLLGVPIMV 327
>gi|66818257|ref|XP_642788.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
gi|74997256|sp|Q54ZS8.1|PABP2_DICDI RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|60470900|gb|EAL68872.1| polyadenylate-binding protein 2 [Dictyostelium discoideum AX4]
Length = 222
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 269 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMA 326
D+ E+ SR++Y N+D K T I +F+S CG V R+ +L D H +VEF
Sbjct: 94 DQEEIDSRSVYVGNVDYKSTHDQILAYFQS-CGTVNRITILSDKTTGHPKGCCYVEFVNK 152
Query: 327 ESAIAALNCSGAVLGSLPIRVSPSKT 352
ES I A+ + + ++++P +T
Sbjct: 153 ESIINAMALNDSFFNERQLKITPKRT 178
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV-----VDCRICGDPNSVLRFAFVE 224
N Q+E+ R+VYV ++D + T +Q+ F +CG V + + G P +VE
Sbjct: 92 NTDQEEIDSRSVYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGC---CYVE 148
Query: 225 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
F ++E A++L + +++ P +T +
Sbjct: 149 FVNKESIINAMALNDSFFNERQLKITPKRTNL 180
>gi|383862667|ref|XP_003706805.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Megachile rotundata]
Length = 630
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGY 141
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIDKVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLF 191
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAA 332
+Y N + +T +K FE ++ D S FV F AE A+
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLE 251
Query: 333 LN 334
LN
Sbjct: 252 LN 253
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 297 E--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
+ S G + ++ D ++ FV F E+A +++ +L
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDKVNGML 163
>gi|413916837|gb|AFW56769.1| hypothetical protein ZEAMMB73_720605 [Zea mays]
Length = 318
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 26/29 (89%)
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQR 305
TIY TNIDKKVT+ D+KLFFES+CGEV R
Sbjct: 255 TIYRTNIDKKVTEADLKLFFESICGEVGR 283
>gi|427796107|gb|JAA63505.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 505
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL 235
++TV+V ++ +V +E+L LF CG VV R+ D + + F FV F +GA AL
Sbjct: 341 KQTVFVGNLAHEVQDEELWKLFAECGDVVAVRLVRDKVTGMGKGFGFVTFKQMDGAALAL 400
Query: 236 SLAGTMLGFYPVRVLP-SKTAI 256
+ G + P+RV P SK A+
Sbjct: 401 EMTGREVSGRPIRVSPFSKQAV 422
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 66/142 (46%), Gaps = 19/142 (13%)
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYC 280
A+V F +E ALSL G +L +RV + P+S+ + +T++
Sbjct: 300 AYVVFKAKEAVNKALSLNGGVLFGNHIRV----------DCVGAPKSQVSEK---QTVFV 346
Query: 281 TNIDKKVTQGDI-KLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAMAESAIAALNCSG 337
N+ +V ++ KLF E CG+V +RL+ D FV F + A AL +G
Sbjct: 347 GNLAHEVQDEELWKLFAE--CGDVVAVRLVRDKVTGMGKGFGFVTFKQMDGAALALEMTG 404
Query: 338 AVLGSLPIRVSP-SKTPVRPRA 358
+ PIRVSP SK V +A
Sbjct: 405 REVSGRPIRVSPFSKQAVPKKA 426
>gi|296815788|ref|XP_002848231.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
gi|238841256|gb|EEQ30918.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
Length = 507
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 231
E +R +YV +D +VTE+ L +F T G V +I D N L + F+E+ D A
Sbjct: 98 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFQSKGLNYGFIEYDDPGAA 157
Query: 232 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 289
RA +L G + +R VN + + + + + I+ ++ +V
Sbjct: 158 ERAMQTLNGRRVHQSEIR----------VNWAYQSNTASKEDTSNHFHIFVGDLSNEVND 207
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLP 344
++ L S CG V R++ D + S FV F A AE A+++++ G LGS
Sbjct: 208 -EVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMD--GEWLGSRA 264
Query: 345 IR 346
IR
Sbjct: 265 IR 266
>gi|380012525|ref|XP_003690330.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like [Apis
florea]
Length = 506
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 87/207 (42%), Gaps = 13/207 (6%)
Query: 149 TTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 208
T R R + +G + R +E RTV+ + Q++ L F + G+V D
Sbjct: 117 TLPRARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDV 176
Query: 209 RI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTF 263
R+ C A+VEF D E AL L+G L P+ V + K + P
Sbjct: 177 RLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNL 236
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFV 321
+P+ + +Y ++ +T+ ++ FE G++ ++L+ D S F+
Sbjct: 237 MPKGQT----GPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDPXTGRSKGYGFL 291
Query: 322 EFAMAESAIAAL-NCSGAVLGSLPIRV 347
F A+ A AL +G L P++V
Sbjct: 292 TFRNADDAKKALEQLNGFELAGRPMKV 318
>gi|193783541|dbj|BAG53452.1| unnamed protein product [Homo sapiens]
Length = 424
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 84/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV A+A ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV---NKALA----------HNKNLDVGANIFIENLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|380019828|ref|XP_003693803.1| PREDICTED: polyadenylate-binding protein 1-like [Apis florea]
Length = 630
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGY 141
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIDRVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLF 191
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAA 332
+Y N + +T +K FE ++ D S FV F AE A+
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLE 251
Query: 333 LN 334
LN
Sbjct: 252 LN 253
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 21/156 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 297 E--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 329
+ S G + ++ D ++ FV F E+A
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAA 152
>gi|389629168|ref|XP_003712237.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|158514092|sp|A4QUF0.1|PABP_MAGO7 RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|351644569|gb|EHA52430.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|440469069|gb|ELQ38192.1| polyadenylate-binding protein [Magnaporthe oryzae Y34]
gi|440487573|gb|ELQ67355.1| polyadenylate-binding protein [Magnaporthe oryzae P131]
Length = 762
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 21/179 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 132 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 191
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE ++A + G +L V V +P K + DE +
Sbjct: 192 GFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKF---------DEMKANFT 242
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL 333
IY NI+ +VT + + FE G+V L D + S FV F E A A+
Sbjct: 243 NIYVKNINPEVTDDEFRTLFEKY-GDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAV 300
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 18/173 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + T +G +A
Sbjct: 62 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEE 121
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 122 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDVAIDNKALHDTF 169
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
+ G + ++ D +++ FV + E+A A+ + +G +L + V
Sbjct: 170 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYV 221
>gi|194753367|ref|XP_001958985.1| GF12652 [Drosophila ananassae]
gi|190620283|gb|EDV35807.1| GF12652 [Drosophila ananassae]
Length = 639
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 27/188 (14%)
Query: 162 RRMNCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV 217
R R +Q+D +RR+ V++ ++D+ + + + F G ++ C++ D +
Sbjct: 69 RNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKTIDNKAIYDTFSAFGNILSCKVATDEKAN 128
Query: 218 LR-FAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS 275
+ + FV F EE A ++ + G +L V V F+PR E E+E+
Sbjct: 129 SKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYV-----------GKFIPRKEREKELGE 177
Query: 276 RT-----IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMA 326
+ +Y N + +K FFE G++ +++ ++ +AF A
Sbjct: 178 KAKLFTNVYVKNFTEDFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAFETTEAA 236
Query: 327 ESAIAALN 334
E+A+ ALN
Sbjct: 237 EAAVQALN 244
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 72/165 (43%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAAL-S 236
++YV D+ Q + E L F + G V+ R+C D S L +A+V F A AL +
Sbjct: 3 SLYVGDLHQDINESNLFDKFSSAGPVLSIRVCRDVMSRRSLGYAYVNFQQPADAERALDT 62
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ +L P+R++ S+ R R ++ N+DK + I F
Sbjct: 63 MNFDLLRNKPIRIMWSQ------------RDPSLRRSGVGNVFIKNLDKTIDNKAIYDTF 110
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
S G + ++ D + +++ FV F E+A +++ +L
Sbjct: 111 -SAFGNILSCKVATDEKANSKGYGFVHFETEEAANTSIDKVNGML 154
>gi|440797930|gb|ELR19004.1| polyadenylate-binding protein family protein [Acanthamoeba
castellanii str. Neff]
Length = 462
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 9/175 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGA-RAALSLA 238
+Y+ ++ + TEE L F G V + DP + R FAFV F D E A RA L
Sbjct: 191 IYIKNLGEAYTEEDLKRDFGAFGTVQSAVLMKDPRDIGRQFAFVNFEDHEAAHRATEELN 250
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTI--YCTNIDKKVTQGDI-KLF 295
G LG V V + +FL + +ER + I Y N+D V ++ KLF
Sbjct: 251 GRKLGDKEVYV--GRAQKKSERESFLRKLREERAQKYQGINLYIKNLDDTVNDEELHKLF 308
Query: 296 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 348
G++ +++ D + ++R FV + E A A++ +G ++ + PI V+
Sbjct: 309 SALPFGQITSCKVMSDDKGNSRGFGFVCYTNPEDASKAVSEMNGKMVANKPIYVA 363
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 21/160 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAAL-S 236
++YV D++ VTE L +F G V R+C D L +A+V F + A AL +
Sbjct: 11 SLYVGDLNPTVTEALLFEIFKAVGPVASIRVCRDAVTRRSLGYAYVNFHNVVDAERALDT 70
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S R R+ I+ N+DK + D K +
Sbjct: 71 LNYTLIKGRPCRIMWSH------------RDPSIRKSGQGNIFIKNLDKSI---DNKALY 115
Query: 297 E--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
+ S G + +++ D + +++ FV + +E+A +A+
Sbjct: 116 DTFSAFGNILSCKVVTDGKGNSKGYGFVHYETSEAADSAI 155
>gi|330812809|ref|XP_003291310.1| hypothetical protein DICPUDRAFT_38760 [Dictyostelium purpureum]
gi|325078525|gb|EGC32172.1| hypothetical protein DICPUDRAFT_38760 [Dictyostelium purpureum]
Length = 587
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA-LSL 237
+ V+ ++ +E+++ LF G + +I + AF+ F D A AA +L
Sbjct: 117 KIVWAGNVHPDSSEDEIRGLFSQFGYIQAIKII----PAKQCAFITFGDVNAAIAAQYNL 172
Query: 238 AGTMLGFYPVRVLPSKTAIAPV-------NPTF-LPRSEDEREMCSRTIYCTNIDKKVTQ 289
GT + YP+++ K AP P F P + E+ ++ ++ NI VT
Sbjct: 173 NGTPIRGYPLKLGFGKVENAPAAFQQQQQQPHFNKPPHHLQEEVPTKNLWLGNIGPSVTS 232
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 348
+K F+ G V +R+L AFV F ESAIAA N +G ++ +P++++
Sbjct: 233 ETLKQLFDQF-GNVDNIRILV----GRGCAFVNFFTVESAIAARNNLTGTMVCGMPLKIN 287
>gi|255556766|ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223541279|gb|EEF42830.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 632
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 9/176 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS-LA 238
+YV ++D +TEE L F G++V I D R F FV F + + AR A+ +
Sbjct: 194 LYVKNLDPGITEELLQEKFSEFGKIVSVAIARDECGSSRGFGFVNFENPDDARWAMERMN 253
Query: 239 GTMLG---FYPVRVLPSKTAIAPVNPTF-LPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
GT LG Y R + F R E + +Y NID VT +++
Sbjct: 254 GTELGSKVLYVGRAQKRAEREQILRRQFEEKRKEQITKFKGSNVYVKNIDDDVTDEELRE 313
Query: 295 FFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 348
F S CG + +L+ D + S FV F+ +E A A+N G + P+ V+
Sbjct: 314 HF-SQCGTITSAKLMKDDKGRSKGFGFVCFSSSEEASKAVNTFHGYMFHRKPLYVA 368
>gi|405961983|gb|EKC27707.1| Splicing factor 3B subunit 4 [Crassostrea gigas]
Length = 405
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 28/166 (16%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D +VTE L LFL G VV+ + D S + FVEF EE A A+ +
Sbjct: 14 TVYVGSLDDKVTEAILWELFLQAGPVVNVHMPKDRVTQSHQGYGFVEFMGEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y P+RV + S ++ + I+ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIRVNKA--------------SAHQKNLDVGANIFIGNLDPEV---DEKL 115
Query: 295 FFES-----VCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC 335
+++ V + ++ D +S AF+ FA E+A AAL
Sbjct: 116 LYDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFEAADAALEA 161
>gi|340719922|ref|XP_003398393.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3 [Bombus
terrestris]
Length = 621
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGY 141
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIDRVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLF 191
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAA 332
+Y N + +T +K FE ++ D S FV F AE A+
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLE 251
Query: 333 LN 334
LN
Sbjct: 252 LN 253
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 297 E--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
+ S G + ++ D ++ FV F E+A +++ +L
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGML 163
>gi|302754900|ref|XP_002960874.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
gi|302767436|ref|XP_002967138.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300165129|gb|EFJ31737.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300171813|gb|EFJ38413.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
Length = 619
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAA 234
+ ++YV D+D V+E QL LF GQV+ R+C D L +A+V + + + A A
Sbjct: 2 VSTSLYVGDLDPNVSENQLYDLFNQIGQVLSIRVCRDLMTRRSLGYAYVNYNNVQDATRA 61
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L L L F PV + + +P+ R+ + I+ N+D+ + +
Sbjct: 62 LEL----LNFTPVNGKAVRIMFSHRDPSI-------RKSGTANIFIKNLDRAIDNKALHD 110
Query: 295 FFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 349
F S G + ++ D S FV+F ESA A++ +G ++ + V P
Sbjct: 111 TFVSF-GNILSCKVATDSNGQSKGYGFVQFEQEESAQVAIDKVNGMLVAEKQVFVGP 166
>gi|317030432|ref|XP_001392545.2| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus niger CBS 513.88]
Length = 478
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV----LRFAFVEFTDEEG 230
E +R +YV +D +VTE+ L +F T G VV +I D N + FVEF D
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGA 146
Query: 231 A-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVT 288
A RA +L G + +R VN + S ++ + + I+ ++ +V
Sbjct: 147 AERAMQTLNGRRIHQSEIR----------VNWAYQSNSTNKEDTSNHFHIFVGDLSNEVN 196
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSL 343
++ L S G V R++ D + +AF E + A+ A+++++ G LGS
Sbjct: 197 D-EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMD--GEWLGSR 253
Query: 344 PIR 346
IR
Sbjct: 254 AIR 256
>gi|340719918|ref|XP_003398391.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
terrestris]
Length = 630
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGY 141
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIDRVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLF 191
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAA 332
+Y N + +T +K FE ++ D S FV F AE A+
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLE 251
Query: 333 LN 334
LN
Sbjct: 252 LN 253
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 21/156 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 297 E--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 329
+ S G + ++ D ++ FV F E+A
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAA 152
>gi|358371808|dbj|GAA88414.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus kawachii IFO 4308]
Length = 478
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV----LRFAFVEFTDEEG 230
E +R +YV +D +VTE+ L +F T G VV +I D N + FVEF D
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGA 146
Query: 231 A-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVT 288
A RA +L G + +R VN + S ++ + + I+ ++ +V
Sbjct: 147 AERAMQTLNGRRIHQSEIR----------VNWAYQSNSTNKEDTSNHFHIFVGDLSNEVN 196
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSL 343
++ L S G V R++ D + +AF E + A+ A+++++ G LGS
Sbjct: 197 D-EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMD--GEWLGSR 253
Query: 344 PIR 346
IR
Sbjct: 254 AIR 256
>gi|345567796|gb|EGX50724.1| hypothetical protein AOL_s00075g150 [Arthrobotrys oligospora ATCC
24927]
Length = 1471
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 80/185 (43%), Gaps = 23/185 (12%)
Query: 158 SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNS 216
++ K+R+N R Q TVYV++ E + LF CG +++ R N+
Sbjct: 1066 TRDKKRLNGREITVQLG--FNTTVYVTNFPPTADENWIRELFKECGPILEVRFPSLKYNN 1123
Query: 217 VLRFAFVEFTDEEGARAALSLAGT-MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC- 274
RF +V+F E A A + G + GF V L P + ER
Sbjct: 1124 HRRFCYVQFDASEDAEKATEMNGKDVEGFKLVSKLSD------------PNVKQERSGAV 1171
Query: 275 --SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHSTRIAFVEFAMAESAI 330
R ++ NID T+ DI+ F S G V+ +RL+ G HS F++F ESA
Sbjct: 1172 YEGREVFVRNIDYAATEDDIRELF-SKYGTVKSIRLISKGRGVHSG-YGFLDFETTESAN 1229
Query: 331 AALNC 335
A+L
Sbjct: 1230 ASLEL 1234
>gi|91079430|ref|XP_968120.1| PREDICTED: similar to spliceosome associated protein [Tribolium
castaneum]
gi|270004395|gb|EFA00843.1| hypothetical protein TcasGA2_TC003731 [Tribolium castaneum]
Length = 393
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 29/180 (16%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T+YV +D +VTE L LF+ G +V+ + D +++ + FVEF EE A A+ +
Sbjct: 14 TIYVGGLDDKVTESLLWELFVQSGPLVNVHMPKDRVTMMHQGYGFVEFMGEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y P+RV + S ++ + I+ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIRVNKA--------------SAHQKNLDVGANIFIGNLDPEV---DEKL 115
Query: 295 FFES-----VCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 348
+++ V + ++ D +S AF+ FA E++ A++ +G L + PI VS
Sbjct: 116 LYDTFSAFGVILQTPKIMRDPDTGNSKGFAFINFASFEASDASIEAMNGQYLCNRPISVS 175
>gi|407918973|gb|EKG12232.1| hypothetical protein MPH_10639 [Macrophomina phaseolina MS6]
Length = 602
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 45/199 (22%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ + L F G Q+V R+ G V +VEF +
Sbjct: 204 EDERDRRTVFVQQLAARLRTKDLIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKN 260
Query: 228 EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT---------- 277
EE AA+ L G L P+ IA + +E E+ +RT
Sbjct: 261 EESVPAAIQLTGQKLMGIPI--------IAQL-------TEAEKNRQARTGDGNNGNNNG 305
Query: 278 -----IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF---AMAES 328
+Y NI +T+ D++ FE GE++ ++L + +R FV+F A A+
Sbjct: 306 VPFHRLYVGNIHFSITESDLQNVFEPF-GELEFVQLQKEEGGRSRGYGFVQFRDPAQAKE 364
Query: 329 AIAALNCSGAVLGSLPIRV 347
A+ +N G L PIRV
Sbjct: 365 ALEKMN--GFDLAGRPIRV 381
>gi|357612395|gb|EHJ67964.1| putative RNA-binding region-containing protein [Danaus plexippus]
Length = 536
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 13/204 (6%)
Query: 152 RKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI- 210
R+R+ Y R + + + +E RTV+ + Q++ + L F + G+V D R+
Sbjct: 155 RERSEYRSKSRGIEPKLDDLPPEERDLRTVFCMQLSQRIRAKDLEEFFSSVGKVRDVRLI 214
Query: 211 -CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 266
C A++EF D E AL L G L P+ V + K + P P+
Sbjct: 215 TCNKTRRFKGIAYIEFKDAESVPLALGLTGQKLLGVPIIVQHTQAEKNRVGNTLPNLAPK 274
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFA 324
+ + +Y ++ +T+ ++ FE G++ ++L+ D S F+ F
Sbjct: 275 TSN----GPTRLYVGSLHFNITEDMLRGIFEPF-GKIDHIQLMTDPDTGKSKGYGFLTFH 329
Query: 325 MAESAIAAL-NCSGAVLGSLPIRV 347
A A A+ +G L P++V
Sbjct: 330 HATDAKKAMEQLNGFELAGRPMKV 353
>gi|383862669|ref|XP_003706806.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Megachile rotundata]
Length = 612
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 25/183 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGY 141
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT-- 277
FV F EE A ++ + G +L V V F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIDKVNGMLLNGKKVYV-----------GKFIPRKEREKELGEKAKL 190
Query: 278 ---IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIA 331
+Y N + +T +K FE ++ D S FV F AE A+
Sbjct: 191 FTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVL 250
Query: 332 ALN 334
LN
Sbjct: 251 ELN 253
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 297 E--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
+ S G + ++ D ++ FV F E+A +++ +L
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDKVNGML 163
>gi|259488599|tpe|CBF88164.1| TPA: nuclear and cytoplasmic polyadenylated RNA-binding protein
pub1 (AFU_orthologue; AFUA_1G12000) [Aspergillus
nidulans FGSC A4]
Length = 477
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 23/182 (12%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 231
E +R +YV +D +VTE+ L +F T G V+ +I D N + FVEF D A
Sbjct: 86 EPNKRALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNFNSKGANYGFVEFDDPGAA 145
Query: 232 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 289
RA +L G + +R VN + + ++ + + I+ ++ +V
Sbjct: 146 ERAMQTLNGRRIHQSEIR----------VNWAYQSNTANKEDTSNHFHIFVGDLSNEVND 195
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 344
++ L S G V R++ D + +AF E A AE A+ +++ G LGS
Sbjct: 196 -EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMD--GEWLGSRA 252
Query: 345 IR 346
IR
Sbjct: 253 IR 254
>gi|226528044|dbj|BAH56564.1| TIA-1-related RNA binding protein [Spodoptera litura]
Length = 388
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 21/196 (10%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D VTE + TLF G+V C+I +P + +AF+EFT A
Sbjct: 3 DESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGND-PYAFLEFTSHTAAAT 61
Query: 234 ALSLAGTMLGFYPVRVLPSKTAI-APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL+ + VL + + +P P+++ I+ ++ ++ +
Sbjct: 62 ALAAMNKRV------VLDKEMKVNWATSPGNQPKTDTSNH---HHIFVGDLSPEIETHIL 112
Query: 293 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRV 347
+ F GE+ R++ D Q S AFV F A AE+AI A+N G LGS IR
Sbjct: 113 RDAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN--GQWLGSRSIRT 169
Query: 348 SPS--KTPVRPRAPRP 361
+ S K P +P P
Sbjct: 170 NWSTRKPPSKPNEGAP 185
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 23/192 (11%)
Query: 163 RMNCRTSNAQQ---DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
++N TS Q D ++V D+ ++ L F G++ +CRI DP ++
Sbjct: 77 KVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKS 136
Query: 220 --FAFVEFTDEEGARAAL-SLAGTMLGF------YPVRVLPSK------TAIAPVNPTFL 264
+AFV F + A AA+ ++ G LG + R PSK ++ PTF
Sbjct: 137 KGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPNEGAPSSKRAKQPTF- 195
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
++ + T+YC V D+ S G++Q +R+ D + AF+ F
Sbjct: 196 DEVYNQSSPTNTTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVFRDKGY----AFIRFT 251
Query: 325 MAESAIAALNCS 336
E+A A+ +
Sbjct: 252 TKEAAAHAIEAT 263
>gi|357121988|ref|XP_003562698.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 427
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 38/217 (17%)
Query: 163 RMNCRTSNAQQDEVIRR-TVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLR- 219
R+N ++ Q+++ ++V D+ +VT+ L F D R+ D +
Sbjct: 130 RVNWAYASGQREDTTDHFNIFVGDLSAEVTDSALFAFFSGYSSSCSDARVMWDQKTGRSR 189
Query: 220 -FAFVEFTDEEGARAALS-LAGTMLGFYPVRV-LPSKTA-------------IAPVNPTF 263
+ FV F +++ A++A++ L G LG +R +K A IA V F
Sbjct: 190 GYGFVSFRNQQDAQSAINDLNGQWLGNRQIRCNWATKGANSVEDQQTSDSKSIAGVTNNF 249
Query: 264 LPRSEDEREMCS----------RTIYCTNIDKKVTQGDIKLFFESV-CGEVQRLRLLGDY 312
+ED +E + RT+Y N+ + TQ + FF ++ G ++ +R+
Sbjct: 250 ---TEDGKEKANEDAPENNPLYRTVYVGNLAHEATQDVLHRFFYALGAGAIEEVRV---- 302
Query: 313 QHSTRIAFVEFA-MAESAIAALNCSGAVLGSLPIRVS 348
QH FV+++ AE+A+A +G +LG PI+ S
Sbjct: 303 QHGKGFGFVKYSSHAEAALAIQMGNGCILGGKPIKCS 339
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 21/174 (12%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSL 237
R+VYV +I VTE L +F + G V C++ S + FV++ + A A L L
Sbjct: 62 RSVYVGNIHVHVTEAVLREVFQSTGSVEGCKLIRKEKS--SYGFVDYYERGSAALAILQL 119
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TIYCTNIDKKVTQGDIKLF 295
G + P+R VN + + +RE + I+ ++ +VT + F
Sbjct: 120 NGRQIFGQPIR----------VNWAY---ASGQREDTTDHFNIFVGDLSAEVTDSALFAF 166
Query: 296 FESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIR 346
F R++ D + S FV F + A +A+N +G LG+ IR
Sbjct: 167 FSGYSSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGNRQIR 220
>gi|242025596|ref|XP_002433210.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212518751|gb|EEB20472.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 637
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 25/190 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F T G ++ C++ D + + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSTFGNILSCKVAQDESGTSKGY 141
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML RV K F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIDKVNGML-LNGKRVFVGK---------FIPRKEREKELGEKAKRF 191
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLG-DYQHSTRIAFVEF---AMAESAIA 331
+Y N + + ++ FE G + +++ D S FV F AE A+A
Sbjct: 192 TNVYVKNFGEDFSDDLLREMFEK-YGRITSHKVMSKDDGKSKGFGFVAFEDPEAAEKAVA 250
Query: 332 ALNCSGAVLG 341
+LN V G
Sbjct: 251 SLNGKEIVEG 260
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 19/166 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
++YV D+ VTE L F + G V+ R+C D L +A+V F A AL
Sbjct: 12 SLYVGDLHSDVTEAMLFEKFSSAGPVLSIRVCRDMITKRSLGYAYVNFQQPADAERALD- 70
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
+ + P++ P + + +P+ R+ ++ N+DK + D K ++
Sbjct: 71 ---TMNYDPLKGKPIRIMWSQRDPSL-------RKSGVGNVFIKNLDKSI---DNKAMYD 117
Query: 298 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
S G + ++ D +++ FV F E+A +++ +L
Sbjct: 118 TFSTFGNILSCKVAQDESGTSKGYGFVHFETEEAANKSIDKVNGML 163
>gi|422295420|gb|EKU22719.1| splicing factor 3B subunit 4 [Nannochloropsis gaditana CCMP526]
Length = 274
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
TVY +D++VTE+ L L G VV + D + + F FVEF EE A A+ +
Sbjct: 14 TVYCGGLDEKVTEDLLWELMQNVGPVVHVHMPRDKVTGMHQCFGFVEFRSEEDADYAVKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y P+RV + S+D + + ++ N+ +V + D+
Sbjct: 74 M-NMVRMYGKPLRVNKA--------------SQDRKTVDVGANLFIGNLAAEVDEKDLYD 118
Query: 295 FFESVCGEVQRLRLL--GDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRV 347
F + G Q +++ D H+ FV F E+A A+ C +GA LG PI V
Sbjct: 119 TFSAFGGITQPPKVMFDPDTGHTKGFGFVSFDSFEAADYAIECMNGAYLGGRPICV 174
>gi|380088391|emb|CCC13655.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 606
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 4/164 (2%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF EE
Sbjct: 179 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKSEEH 238
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
+AAL L G L PV V ++ T + +Y NI +T+
Sbjct: 239 VQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTESTGHHPNSIPFHRLYVGNIHFSITEQ 298
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
D++ FE GE++ ++L D +R FV++ ES L
Sbjct: 299 DLQNVFEPF-GELEFVQLQKDDNGRSRGYGFVQYFTPESTANLL 341
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVE 322
P +EDER+ RT++ + ++ ++K FFE V G V +++ D S + +VE
Sbjct: 176 PLTEDERDR--RTVFVQQLAARLRTRELKEFFEKV-GPVAEAQIVKDRVSNRSKGVGYVE 232
Query: 323 FAMAESAIAALNCSGAVLGSLPIRV 347
F E AAL +G L +P+ V
Sbjct: 233 FKSEEHVQAALQLTGQKLLGIPVIV 257
>gi|194036296|ref|XP_001926524.1| PREDICTED: splicing factor 3B subunit 4 [Sus scrofa]
gi|344275508|ref|XP_003409554.1| PREDICTED: splicing factor 3B subunit 4-like [Loxodonta africana]
gi|417400717|gb|JAA47284.1| Putative splicing factor 3b subunit 4 [Desmodus rotundus]
Length = 424
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|358383610|gb|EHK21274.1| hypothetical protein TRIVIDRAFT_116557, partial [Trichoderma virens
Gv29-8]
Length = 466
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 232
E +R +YV +DQ+VTE+ L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 73 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAER 132
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 291
A +L G + +R VN + + + + + I+ ++ +V D
Sbjct: 133 AMQTLNGRRVHQSEIR----------VNWAYQSNTTSKEDTSNHFHIFVGDLSNEVND-D 181
Query: 292 IKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIR 346
I L S G V R++ D + S FV F AE A+++++ G LGS IR
Sbjct: 182 ILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMD--GEWLGSRAIR 239
>gi|425768240|gb|EKV06770.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum Pd1]
gi|425770410|gb|EKV08883.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum PHI26]
Length = 482
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 76/182 (41%), Gaps = 21/182 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL-----RFAFVEFTDEE 229
E +R +YV +D +VTE+ L +F T G VV +I D N + FVEF D
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNGQFTTKGHNYGFVEFDDPG 146
Query: 230 GA-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKV 287
A RA +L G + +R VN + S + + + I+ ++ +V
Sbjct: 147 AAERAMQTLNGRRIHQSEIR----------VNWAYQSNSTSKEDTSNHFHIFVGDLSNEV 196
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNC-SGAVLGSLP 344
+ F S G V R++ D + S FV F A ALN G LGS
Sbjct: 197 NDEVLTQAF-SAFGSVSEARVMWDMKTGRSRGYGFVAFRDRTEADKALNSMDGEWLGSRA 255
Query: 345 IR 346
IR
Sbjct: 256 IR 257
>gi|356567420|ref|XP_003551918.1| PREDICTED: protein MEI2-like 2-like [Glycine max]
Length = 857
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDCRICGDPNSVLRFAFVEFTDEEGARAA 234
RT++V +I+ V + +L TLF G + C+ G F + + D AR A
Sbjct: 199 RTLFVRNINSNVEDSELRTLFEQYGDIRTLYTACKHRG-------FVMISYYDIRAARTA 251
Query: 235 LSLAGTMLGFYPVR--VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
+ L P+R L +I NP+ E+++ T+ N+D V+ D+
Sbjct: 252 M----RALQNKPLRRRKLDIHFSIPKDNPS-------EKDINQGTLVVFNLDPSVSNDDL 300
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
+ F GEV+ +R +H I F + AE+A+ ALN S + I++ PS+
Sbjct: 301 RQIF-GAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSD--IAGKRIKLEPSR 356
>gi|400595086|gb|EJP62896.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 468
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 232
E +R +YV +DQ+VTE+ L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 64 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFNYGFVEYDDPGAADR 123
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 291
A +L G + +R VN + S + + I+ ++ +V D
Sbjct: 124 AMQTLNGRRVHQSEIR----------VNWAYQANSSGKEDTSGHFHIFVGDLSNEVND-D 172
Query: 292 IKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIR 346
I S G V R++ D + S FV F AE A+++++ G LGS IR
Sbjct: 173 ILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMD--GEWLGSRAIR 230
>gi|403221305|dbj|BAM39438.1| polyadenylate-binding protein [Theileria orientalis strain
Shintoku]
Length = 656
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 26/179 (14%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR----FAFVEFTDEEGARAAL 235
++YV D+ VTE L +F T G V R+C D SV R +A+V + + A AAL
Sbjct: 28 SLYVGDLQPDVTEAVLYEVFNTIGPVASIRVCRD--SVTRKSLGYAYVNYYSTQDAEAAL 85
Query: 236 -SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
+L + +P R++ S R R+ + I+ N+DK + D K
Sbjct: 86 ENLNYIEIKGHPTRIMWSN------------RDPSLRKSGAGNIFVKNLDKSI---DTKS 130
Query: 295 FFESVC--GEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
+++ G + ++ D S R FV + ESA A+ +G ++G + V+P
Sbjct: 131 LYDTFAHFGTILSCKVAVDSTGASRRYGFVHYESEESAREAIEKVNGMLIGGKKVEVAP 189
>gi|350408506|ref|XP_003488427.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Bombus
impatiens]
Length = 621
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGY 141
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIDRVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLF 191
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAA 332
+Y N + +T +K FE ++ D S FV F AE A+
Sbjct: 192 TNVYVKNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLE 251
Query: 333 LN 334
LN
Sbjct: 252 LN 253
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 297 E--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
+ S G + ++ D ++ FV F E+A +++ +L
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGML 163
>gi|328715704|ref|XP_001946343.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1
[Acyrthosiphon pisum]
Length = 419
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 17/183 (9%)
Query: 163 RMNCRTSNAQQ---DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
++N +S Q D ++V D+ ++ + L F G++ DCR+ DP ++
Sbjct: 76 KLNWVSSPGPQLKADTSKHHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKS 135
Query: 220 --FAFVEFTDEEGARAAL-SLAGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDE 270
+ FV F + A +A+ ++ G LG + R P+ + P ++
Sbjct: 136 KGYGFVSFLKKAEAESAIAAMNGQWLGSRSIRTNWATRKPPTLKTDSNTKPLTFDEVYNQ 195
Query: 271 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAI 330
+ T+YC + +T ++ F G +Q +R+ D + AFV FA ESA
Sbjct: 196 SSPTNCTVYCGGLTSGLTDELVQKTFAPF-GNIQEIRVFKDKGY----AFVRFATKESAT 250
Query: 331 AAL 333
A+
Sbjct: 251 HAI 253
>gi|297845300|ref|XP_002890531.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
gi|297336373|gb|EFH66790.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN-SVLRFAFVEFTDEEGA-RAALSL 237
++Y D+D +VTE L LF VV R+C D N L +A++ F++ A RA +L
Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEAL 109
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
T L P+R++ S R R I+ N+D + D K FE
Sbjct: 110 NYTPLFERPIRIMLSN------------RDPSTRLSGKGNIFIKNLDASI---DNKALFE 154
Query: 298 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
S G + ++ D ++ FV+F ESA AA++ +L
Sbjct: 155 TFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGML 200
>gi|70938791|ref|XP_740024.1| splicing factor [Plasmodium chabaudi chabaudi]
gi|56517446|emb|CAH81784.1| splicing factor, putative [Plasmodium chabaudi chabaudi]
Length = 412
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALN 334
T+ N+D K + DI FF V G+V+ ++ + D + S +A+VEF ES I AL
Sbjct: 148 TVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQESVIKALA 207
Query: 335 CSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
+G +L + PI+V S+ + RA + H
Sbjct: 208 ANGYMLKNRPIKVQSSQAE-KNRAAKASKH 236
>gi|350408504|ref|XP_003488426.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
impatiens]
Length = 630
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGY 141
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIDRVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLF 191
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAA 332
+Y N + +T +K FE ++ D S FV F AE A+
Sbjct: 192 TNVYVKNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLE 251
Query: 333 LN 334
LN
Sbjct: 252 LN 253
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 21/156 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 297 E--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 329
+ S G + ++ D ++ FV F E+A
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAA 152
>gi|340719924|ref|XP_003398394.1| PREDICTED: polyadenylate-binding protein 1-like isoform 4 [Bombus
terrestris]
Length = 612
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGY 141
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIDRVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLF 191
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAA 332
+Y N + +T +K FE ++ D S FV F AE A+
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLE 251
Query: 333 LN 334
LN
Sbjct: 252 LN 253
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 21/156 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 297 E--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA 329
+ S G + ++ D ++ FV F E+A
Sbjct: 117 DTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAA 152
>gi|67517823|ref|XP_658695.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
gi|40747053|gb|EAA66209.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
Length = 892
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 24/183 (13%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV----LRFAFVEFTDEEG 230
E +R +YV +D +VTE+ L +F T G V+ +I D N + FVEF D
Sbjct: 86 EPNKRALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNQFNSKGANYGFVEFDDPGA 145
Query: 231 A-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVT 288
A RA +L G + +R VN + + ++ + + I+ ++ +V
Sbjct: 146 AERAMQTLNGRRIHQSEIR----------VNWAYQSNTANKEDTSNHFHIFVGDLSNEVN 195
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSL 343
++ L S G V R++ D + +AF E A AE A+ +++ G LGS
Sbjct: 196 D-EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMD--GEWLGSR 252
Query: 344 PIR 346
IR
Sbjct: 253 AIR 255
>gi|145478851|ref|XP_001425448.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392518|emb|CAK58050.1| unnamed protein product [Paramecium tetraurelia]
Length = 232
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 80/171 (46%), Gaps = 13/171 (7%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALSLA 238
V++S + +E + +LF CG+++ ++ D N +L + + F+D E + AL+L
Sbjct: 4 VFISGLPYTASENDVQSLFEDCGEILSIKLPRYQDSNRLLGYGHITFSDSEAIQKALALN 63
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
GT LG + V +K P P P C TI+ N+ + I F
Sbjct: 64 GTQLGGRYIDVKEAK-GTQPQKPNVPPPD------C-LTIFVKNLSYDLNADQIGDSFRP 115
Query: 299 VCGEVQRLRLLGDY--QHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
CG+V +R++ + ++ A+++F +S I AL +G + ++V
Sbjct: 116 -CGKVANVRMVYNTVSKNFKGFAYIDFEDHQSVIKALQMNGKKVHGRQVQV 165
>gi|340370502|ref|XP_003383785.1| PREDICTED: RNA-binding protein 39-like [Amphimedon queenslandica]
Length = 497
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 19/179 (10%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 236
RT+ + +VT L F+ G V D I D S A+VEF +E ALS
Sbjct: 154 RTIMCMQLSAKVTNRDLEDFFMRAGVVRDVHIIADRQSRRSKGIAYVEFQEESSVFTALS 213
Query: 237 LAGTMLGFYPVRVLPS-----KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
+G + P+ + P+ + A A N L ++E +++ +++ NI + + QG
Sbjct: 214 FSGQKVHGIPIMIQPTMAEKNRLAAAAEN---LKKAEGPKKLYVGSLHY-NITEDMLQGI 269
Query: 292 IKLFFESVCGEVQRLRLLGDYQH--STRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
F G V+R+ ++ D S AFVEF ++SA A+ N +G L P++V
Sbjct: 270 FSPF-----GNVERVSIMRDTATNVSRGYAFVEFRDSDSAERAMANLNGFELAGRPMKV 323
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL 333
RTI C + KVT D++ FF G V+ + ++ D Q S IA+VEF S AL
Sbjct: 154 RTIMCMQLSAKVTNRDLEDFFMR-AGVVRDVHIIADRQSRRSKGIAYVEFQEESSVFTAL 212
Query: 334 NCSGAVLGSLPIRVSPS 350
+ SG + +PI + P+
Sbjct: 213 SFSGQKVHGIPIMIQPT 229
>gi|145349140|ref|XP_001418998.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579228|gb|ABO97291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 572
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 84/189 (44%), Gaps = 22/189 (11%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEF 225
T AQQ ++YV D++ VTE QL F + G VV R+C D L +A+V F
Sbjct: 26 TPAAQQPGAGTSSLYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNF 85
Query: 226 -TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 284
+ + A A L ++ P+RVL S+ R R I+ N+D
Sbjct: 86 QSPNDAAHAIDVLNFQVINGKPIRVLYSQ------------RDPAVRRSGVGNIFIKNLD 133
Query: 285 KKVTQGDIKLFFESVC--GEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVL 340
K + D K ++ G + ++ D Q +++ FV+F E+A AA+ N +G L
Sbjct: 134 KAI---DNKALLDTFAQFGTITSAKVAMDGQGNSKGYGFVQFETQEAAQAAIDNVNGMEL 190
Query: 341 GSLPIRVSP 349
+ V P
Sbjct: 191 NDKQVYVGP 199
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSLA 238
+Y+ +++ +E+L LF G + CR+ D + V R AFV F+ +E RA +
Sbjct: 320 LYIKNLEDGTDDEKLRELFKEFGTITSCRVMRDASGVSRGSAFVAFSSPDEATRAVTEMN 379
Query: 239 GTMLGFYPVRV 249
G M+G P+ V
Sbjct: 380 GKMVGAKPLYV 390
>gi|118102061|ref|XP_423721.2| PREDICTED: splicing factor 3B subunit 4 [Gallus gallus]
Length = 418
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|303272375|ref|XP_003055549.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463523|gb|EEH60801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 606
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 22/177 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD-EEGARAALS 236
++Y D+D TE QL LF T G VV R+C D L +A+V F + ARA +
Sbjct: 33 SLYCGDLDPSCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFQQGNDAARAIDA 92
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L ++ P+R++ S+ R R+ I+ N+DK++ D K +
Sbjct: 93 LNFQVVNGKPIRIMYSQ------------RDPALRKSGVGNIFIKNLDKEI---DNKALY 137
Query: 297 ESVC--GEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
++ G + ++ D Q S FV+F E A +A+ +G +L + V P
Sbjct: 138 DTFAQFGNIVSAKVATDLQGQSKGYGFVQFDTEEGAQSAIEKVNGMLLNDKQVYVGP 194
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 10/177 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGA-RAALSLA 238
VYV ++ + VTEE+L +F G + + D + F FV + D E A ++ L
Sbjct: 211 VYVKNLHESVTEEKLREVFEKFGALTSVVVMKDAEGKSKGFGFVCYEDAEAAGKSVEELD 270
Query: 239 G----TMLGFYPVRVLPSKTAIAPVNPTF-LPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
G + R A + F R E +M +Y N++ V ++
Sbjct: 271 GYDKIEDKAWVVCRAQKKSEREAELKAKFDAERRERMEKMAGANLYIKNLEDTVDDAKLR 330
Query: 294 LFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 348
F G + R++ D ++R AFV F+ A+ A A+ +G + G P+ V+
Sbjct: 331 ELFAEF-GTITSCRVMRDTAGASRGSAFVAFSSADEATRAVTEMNGKMAGQKPLYVA 386
>gi|119186105|ref|XP_001243659.1| hypothetical protein CIMG_03100 [Coccidioides immitis RS]
gi|392870366|gb|EAS32162.2| CC1-like family splicing factor [Coccidioides immitis RS]
Length = 595
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 6/192 (3%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR- 219
KRR +DE +RTV+V + ++ ++L F G V D +I D S
Sbjct: 188 KRRSKTPEPQLTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSK 247
Query: 220 -FAFVEFTDEEGARAALSLAG-TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT 277
+VEF +EE A+ L G +LG + T S ++ +
Sbjct: 248 GVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQFTEAEKNKAARNTEGHVSGNQNSIPFHR 307
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NC 335
+Y NI +T+ D++ FE GE+ ++L D +R FV+F A AL
Sbjct: 308 LYVGNIHFSITESDLQNVFEPF-GELDFVQLQKDENGRSRGYGFVQFRDPNQAREALEKM 366
Query: 336 SGAVLGSLPIRV 347
+G L PIRV
Sbjct: 367 NGFDLAGRPIRV 378
>gi|356564176|ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 654
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGA 231
++ + ++YV D+DQ V + QL LF GQVV R+C D + L + +V F++ + A
Sbjct: 30 NQFVTTSLYVGDLDQNVNDSQLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNFSNPQDA 89
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
AL + L F P+ + + +P+ R+ + I+ N+DK +
Sbjct: 90 ARALDV----LNFTPLNNRSIRIMYSHRDPSL-------RKSGTANIFIKNLDKAIDHKA 138
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
+ F S G + ++ D ++ FV+F E+A A++ +L
Sbjct: 139 LHDTFSSF-GLILSCKIATDASGLSKGYGFVQFDNEEAAQNAIDKLNGML 187
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D +++E+L +F G + C++ DP + R + FV F T EE RA +
Sbjct: 319 LYLKNLDDTISDEKLKEMFADYGTITSCKVMRDPTGISRGSGFVAFSTPEEATRALGEMN 378
Query: 239 GTMLGFYPVRV 249
G M P+ V
Sbjct: 379 GKMFAGKPLYV 389
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 81/180 (45%), Gaps = 24/180 (13%)
Query: 165 NCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR- 219
+ R + +D +R++ +++ ++D+ + + L F + G ++ C+I D + + +
Sbjct: 105 SIRIMYSHRDPSLRKSGTANIFIKNLDKAIDHKALHDTFSSFGLILSCKIATDASGLSKG 164
Query: 220 FAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT- 277
+ FV+F +EE A+ A+ L G ++ V V FL R +D S+T
Sbjct: 165 YGFVQFDNEEAAQNAIDKLNGMLINDKQVYV-----------GHFL-RKQDRENALSKTK 212
Query: 278 ---IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
+Y N+ + T ++ + F G + ++ D +R FV F + A A+
Sbjct: 213 FNNVYVKNLSESTTDEELMINFGE-YGTITSALIMRDADGKSRCFGFVNFENPDDAAKAV 271
>gi|452843390|gb|EME45325.1| hypothetical protein DOTSEDRAFT_71152 [Dothistroma septosporum
NZE10]
Length = 785
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 127 CRIMWSQRDPALRKTGQGNVFIKNLDGAIDNKALHDTFAAFGNILSCKVAQDEHGNSKGY 186
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + E A +A+ S+ G +L V V +P K ++ +E +
Sbjct: 187 GFVHYETAEAANSAIKSVNGMLLNEKKVFVGHHIPKKDRMSKF---------EEMKANFT 237
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIAA 332
IY NID + T + + FE G++ L D + +R + ++ A A+
Sbjct: 238 NIYVKNIDPEATDDEFRALFEKY-GDITSASLAHDQEGKSRGFGFVNYIRHEDANKAVEE 296
Query: 333 LNCS 336
LN S
Sbjct: 297 LNNS 300
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 57 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSANDGERALEE 116
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 117 LNYTLIKGKPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDGAIDNKALHDTF 164
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D + +S FV + AE+A +A+ +L
Sbjct: 165 -AAFGNILSCKVAQDEHGNSKGYGFVHYETAEAANSAIKSVNGML 208
>gi|290981403|ref|XP_002673420.1| polyadenylate binding protein [Naegleria gruberi]
gi|284087003|gb|EFC40676.1| polyadenylate binding protein [Naegleria gruberi]
Length = 571
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 32/186 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALSL 237
++YV D+ ++++E L LF G ++ RIC D L +A+V F + + A AL
Sbjct: 7 SLYVGDLHEEISEALLFDLFHEVGPIISIRICRDAMTRKSLGYAYVNFQNPQDAERALD- 65
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L + V+ +P + + +P+ R+ I+ N+DK + D K ++
Sbjct: 66 ---TLNYASVKGIPIRIMWSQRDPSI-------RKSGIGNIFIKNLDKSI---DNKALYD 112
Query: 298 S-----------VCGEVQRLRLLGDYQHSTRIAFVEFAM---AESAIAALNCSGAVLGSL 343
+ VC ++ GD S FV F AE AIA +N G +L
Sbjct: 113 TFSAFGNILSCKVCQATKKGDNGGDNVESAGYGFVHFETQEAAEKAIAKIN--GMLLNGK 170
Query: 344 PIRVSP 349
+ V P
Sbjct: 171 QVFVGP 176
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 31/188 (16%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRIC---------G 212
R +Q+D IR++ +++ ++D+ + + L F G ++ C++C G
Sbjct: 77 IRIMWSQRDPSIRKSGIGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVCQATKKGDNGG 136
Query: 213 DPNSVLRFAFVEFTDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
D + FV F +E A A++ + G +L V V P F+ ++E +
Sbjct: 137 DNVESAGYGFVHFETQEAAEKAIAKINGMLLNGKQVFVGP-----------FVKKTERLK 185
Query: 272 EMCSR----TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL-GDYQHSTRIAFVEFAMA 326
+ + IY N+D V + ++ F S GE+Q ++ G+ S F+ FA
Sbjct: 186 ILSNEDSFTNIYVKNLDASVDEKELSEVF-SKFGEIQNAVVMRGENGASKEFGFINFADH 244
Query: 327 ESAIAALN 334
SA+ A++
Sbjct: 245 ASALIAID 252
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS-LAG 239
+YV ++D V +E+L F G + ++ D F FV F E A AL+ ++G
Sbjct: 299 LYVKNLDDSVDDERLRQEFSKFGDITSAKVMSDNKQSRGFGFVCFKTPEAANKALTEMSG 358
Query: 240 TMLGFYPVRV 249
M+G P+ V
Sbjct: 359 HMIGSKPLYV 368
>gi|452820290|gb|EME27334.1| RNA-binding protein [Galdieria sulphuraria]
Length = 596
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 27/195 (13%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 236
RT++V + Q+VTE+ + F G+V D R+ D S A+VEF +E +A+
Sbjct: 186 RTIFVWQLAQKVTEKDVYNFFSAAGKVRDIRMIIDKRSGRHKGAAYVEFYYKEAIPSAMR 245
Query: 237 LAGTMLGFYPVRVLPSKT--------------AIAPVNPTFLPR-------SEDEREMCS 275
LAG L YPV + PS+ A L S + +
Sbjct: 246 LAGQQLCGYPVAIKPSEAEKNIAAEMAAREAAAAQQARLAELEEWSGGGDTSPNSNPLTF 305
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL 333
+Y +I +++ D++ FE GEV L+L D + S FV++ E A A
Sbjct: 306 TKLYVGSIHFSISEDDLRTIFEPF-GEVISLQLHKDPETGRSRGFGFVQYKNHEDAKKAF 364
Query: 334 -NCSGAVLGSLPIRV 347
+G L P++V
Sbjct: 365 EQLNGLDLAGRPLKV 379
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 7/85 (8%)
Query: 270 EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR---IAFVEFAMA 326
ER++ RTI+ + +KVT+ D+ FF S G+V+ +R++ D + S R A+VEF
Sbjct: 182 ERDL--RTIFVWQLAQKVTEKDVYNFF-SAAGKVRDIRMIID-KRSGRHKGAAYVEFYYK 237
Query: 327 ESAIAALNCSGAVLGSLPIRVSPSK 351
E+ +A+ +G L P+ + PS+
Sbjct: 238 EAIPSAMRLAGQQLCGYPVAIKPSE 262
>gi|303318024|ref|XP_003069014.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108695|gb|EER26869.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320036831|gb|EFW18769.1| RNA splicing factor [Coccidioides posadasii str. Silveira]
Length = 593
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 81/192 (42%), Gaps = 6/192 (3%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR- 219
KRR +DE +RTV+V + ++ ++L F G V D +I D S
Sbjct: 186 KRRSKTPEPQLTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSK 245
Query: 220 -FAFVEFTDEEGARAALSLAG-TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT 277
+VEF +EE A+ L G +LG + T S ++ +
Sbjct: 246 GVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQFTEAEKNKAARNTEGHVSGNQNSIPFHR 305
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NC 335
+Y NI +T+ D++ FE GE+ ++L D +R FV+F A AL
Sbjct: 306 LYVGNIHFSITESDLQNVFEPF-GELDFVQLQKDENGRSRGYGFVQFRDPNQAREALEKM 364
Query: 336 SGAVLGSLPIRV 347
+G L PIRV
Sbjct: 365 NGFDLAGRPIRV 376
>gi|334312764|ref|XP_003339775.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
1-like [Monodelphis domestica]
Length = 614
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 26/189 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA 221
R +Q+D +R++ +++ ++D + + L F T G ++ C++ D N F
Sbjct: 82 IRIMWSQRDPGLRKSGIGNIFIKNLDDSIDNKALYDTFSTFGNILSCKVVCDENGSRGFG 141
Query: 222 FVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYC 280
FV F E A A+ ++ G +L V V F R E E E+ +R +
Sbjct: 142 FVHFETHEAANQAINTMNGMLLNDRKVFV-----------GHFKSRQEREAELGARALEF 190
Query: 281 TNIDKKVTQGDI------KLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
TNI K +GD+ +LF S G+ ++++ D +R FV F E A A+
Sbjct: 191 TNIYVKNFEGDMDDECLQELF--SQFGKTLSVKVMVDENGQSRGFGFVNFEKHEEAQKAV 248
Query: 334 -NCSGAVLG 341
N +G LG
Sbjct: 249 SNMNGKELG 257
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 20/166 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAAL-S 236
++YV D+ VTE L F G ++ R+C D + L +A++ F A AL +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSAAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ ++ P+R++ S+ R R+ I+ N+D + D K +
Sbjct: 72 MNFEVIKGRPIRIMWSQ------------RDPGLRKSGIGNIFIKNLDDSI---DNKALY 116
Query: 297 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ S G + +++ D S FV F E+A A+N +L
Sbjct: 117 DTFSTFGNILSCKVVCDENGSRGFGFVHFETHEAANQAINTMNGML 162
>gi|357440279|ref|XP_003590417.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355479465|gb|AES60668.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 591
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLA 238
+YV ++D VTE+ L F + G++V I D N + F FV + + AR A+ ++
Sbjct: 196 LYVKNLDPVVTEKHLGEKFSSFGKIVSLAIKKDENGQSKGFGFVNYDSPDDARRAMEAMD 255
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
G+ G + V ++ + E + IY NID V +++ F S
Sbjct: 256 GSQFGSKILYVARAQKKVEREQILHHLFVEKGLKHMGSNIYVKNIDTSVGDEELRDHF-S 314
Query: 299 VCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNC 335
CGEV +++ D + +++ FV F+ A +++C
Sbjct: 315 ACGEVLSAKVMRDDKGTSKGFGFVCFSTVVEAFKSMSC 352
>gi|336376899|gb|EGO05234.1| hypothetical protein SERLA73DRAFT_44756 [Serpula lacrymans var.
lacrymans S7.3]
Length = 523
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 37/223 (16%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEE 229
++D V+V D+ +V +E L F G + D R+ D NS + F+ F D+
Sbjct: 98 KEDTTGHYHVFVGDLSPEVNDEILGKAFSAFGTMSDARVMWDMNSGKSRGYGFLAFRDKT 157
Query: 230 GARAAL-SLAGTMLGFYPVRV-----------------LPSKT--AIAPVNPTFLPRSED 269
A A+ ++ G LG +RV P T A AP+N P S D
Sbjct: 158 DAEQAIATMNGEWLGSRAIRVNWANQKTQGSVAVASPPRPGATGGAPAPINFQGGPLSYD 217
Query: 270 ----EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
+ + T+Y N+ TQ D+ F+S+ G + +R+ D AFV+
Sbjct: 218 SVVQQTPSYNSTVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQAD----RGFAFVKLDT 272
Query: 326 AE-SAIAALNCSGAVLGSLPIRVSPSK-----TPVRPRAPRPP 362
E +A+A + G ++ PI+ S K T +P P P
Sbjct: 273 HEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTTAQPGGPLSP 315
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 73/179 (40%), Gaps = 22/179 (12%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGARAA 234
R +YV ++ +VTE L +F G V +I D N L + FVE+ D A A
Sbjct: 13 RAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETA 72
Query: 235 L-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L +L G + +R VN + + E ++ ++ +V +
Sbjct: 73 LQTLNGRKIFDTEIR----------VNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEILG 122
Query: 294 LFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
F S G + R++ D +AF + AE AIA +N G LGS IRV
Sbjct: 123 KAF-SAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMN--GEWLGSRAIRV 178
>gi|198425590|ref|XP_002119350.1| PREDICTED: similar to splicing factor 3b, subunit 4 [Ciona
intestinalis]
Length = 375
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 27/179 (15%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V E L LFL G VV + D S + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVAEPLLWELFLQAGVVVSTHMPKDRISGSHQGYGFVEFLAEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + S + ++ N+D ++ D KL
Sbjct: 74 L-NMIKLYGKPIRV--NKAS-----------SHQKNLDVGANLFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 348
+++ V + ++ D +S AF+ FA E++ AA+ +G L + PI +S
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFEASDAAMEAMNGQHLCNRPISIS 175
>gi|255582384|ref|XP_002531981.1| Protein gar2, putative [Ricinus communis]
gi|223528378|gb|EEF30417.1| Protein gar2, putative [Ricinus communis]
Length = 436
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 13/187 (6%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEFT 226
S +Q E VYV I TEE + + F CG + VDC D A + F
Sbjct: 171 SESQISEDSATKVYVGGIPYYSTEEDIRSYFEGCGTITEVDCMTFPDSGKFRGIAIIGFK 230
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTA---IAPVNPTFLPRSEDEREMCSRTIYCTNI 283
E A+ AL+L G+ +G + +++ P KT A F P+ E +R IY N+
Sbjct: 231 TEAAAKRALALDGSDMGGFFLKIQPYKTTRTFQAKKVSDFAPKI---VEGYNR-IYVGNL 286
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF--VEFAMAESAIAALNCSGAVLG 341
+T+ D++ FF S C ++ +R D + + VEF+ S + AL ++
Sbjct: 287 SWDITEEDLRKFF-SGC-KISSVRWGTDKETGEFRGYGHVEFSDNLSLLMALKLDQQIVC 344
Query: 342 SLPIRVS 348
I++S
Sbjct: 345 GRAIKIS 351
>gi|66800585|ref|XP_629218.1| hypothetical protein DDB_G0293252 [Dictyostelium discoideum AX4]
gi|60462622|gb|EAL60825.1| hypothetical protein DDB_G0293252 [Dictyostelium discoideum AX4]
Length = 691
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 22/183 (12%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA-RAALSL 237
+ V+ +I+ + TEE++ LF G + +I PN + AF+ F D A +A +L
Sbjct: 177 KIVWAGNINPESTEEEVRHLFSQFGYLQAIKII--PNK--QCAFITFADVNCAIQAQFNL 232
Query: 238 AGTMLGFYPVRVLPSKTAIAP--------VNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 289
GT+ P+++ K AP + P E E ++ ++ N++ V+
Sbjct: 233 NGTIFRGLPLKLGFGKVENAPQANFGGGRFDQYNKPHQE---ETPTKNLWLGNVNSNVSY 289
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 348
+K F+ G V +R+L H AFV F ESA AA N +G ++ +P++++
Sbjct: 290 ELLKQIFDQF-GNVDTIRIL----HGRGCAFVNFFTVESAAAARNGLNGTMVCGMPLKIN 344
Query: 349 PSK 351
K
Sbjct: 345 FRK 347
>gi|3287682|gb|AAC25510.1| Strong similarity to gb|M97657 poly(A)-binding protein (PABP5) from
A. thaliana [Arabidopsis thaliana]
Length = 655
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN-SVLRFAFVEFTDEEGA-RAALSL 237
++Y D+D +VTE L LF VV R+C D N L +A++ F++ A RA +L
Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEAL 109
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
T L P+R++ S R R I+ N+D + D K FE
Sbjct: 110 NYTPLFDRPIRIMLSN------------RDPSTRLSGKGNIFIKNLDASI---DNKALFE 154
Query: 298 --SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVL 340
S G + ++ D S FV+F ESA AA++ +L
Sbjct: 155 TFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGML 200
>gi|406861752|gb|EKD14805.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 495
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 232
E +R +YV +D +VTE+ L +F T G V + +I D NS + FVE+ D A R
Sbjct: 85 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNSKGFNYGFVEYDDPAAAER 144
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 291
A +L G + +R VN + + ++ + + I+ ++ +V +
Sbjct: 145 AMQTLNGRRVHQAEIR----------VNWAYQSNTSNKEDTSNHFHIFVGDLSNEVND-E 193
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 346
+ L S G V R++ D + +AF E AE A+++++ G LGS IR
Sbjct: 194 VLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMD--GEWLGSRAIR 251
>gi|403302777|ref|XP_003942029.1| PREDICTED: splicing factor 3B subunit 4 [Saimiri boliviensis
boliviensis]
Length = 424
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMQDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|268570897|ref|XP_002640866.1| Hypothetical protein CBG15757 [Caenorhabditis briggsae]
Length = 296
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
RTVYV++I +VTE+ L LFL G +V +S RFA VEF DEE A+ +
Sbjct: 10 RTVYVANITPEVTEDMLEELFLQAGPLVKVITRNVRDSTARFALVEFEDEESVIFAIKI- 68
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPT 262
+ +R+ + + P N T
Sbjct: 69 -----LHGIRLFDREIQVKPRNNT 87
>gi|356526987|ref|XP_003532096.1| PREDICTED: protein MEI2-like 2-like [Glycine max]
Length = 856
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDCRICGDPNSVLRFAFVEFTDEEGARAA 234
RT++V +I+ V + +L TLF G + C+ G F + + D AR A
Sbjct: 199 RTLFVRNINSNVEDSELRTLFELYGDIRTLYTACKHRG-------FVMISYYDIRAARTA 251
Query: 235 LSLAGTMLGFYPVR--VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
+ L P+R L +I NP+ E+++ T+ N+D V+ D+
Sbjct: 252 M----RALQNKPLRRRKLDIHFSIPKDNPS-------EKDINQGTLVVFNLDPSVSNDDL 300
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
+ F GEV+ +R +H I F + AE+A+ ALN S + I++ PS+
Sbjct: 301 RQIF-GAYGEVKEIRETPHKRHHKFIEFYDVRAAEAALKALNRSD--IAGKRIKLEPSR 356
>gi|357437769|ref|XP_003589160.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478208|gb|AES59411.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 647
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 25/175 (14%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 231
++ + ++YV D++ V + QL LF GQVV R+C D L + +V FT+ + A
Sbjct: 27 NQFVTTSLYVGDLEVNVNDSQLYDLFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDA 86
Query: 232 RAALSLAGTMLGFYP-----VRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 286
AL + L F P +RV+ S R R+ + I+ N+DK
Sbjct: 87 ARALDV----LNFTPMNNKSIRVMYSH------------RDPSSRKSGTANIFIKNLDKT 130
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVL 340
+ + F S G++ ++ D S FV+F +SA A++ +L
Sbjct: 131 IDHKALHDTFSSF-GQIMSCKIATDGSGQSKGYGFVQFEAEDSAQNAIDKLNGML 184
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 158 SQGKRRMNCRTSNAQQDEVIRR----TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD 213
S+ ++ + R ++ V+ + +Y+ ++D +T+E+L +F G + +I D
Sbjct: 290 SEREQELKGRFEQTVKESVVDKFQGLNLYLKNLDDSITDEKLKEMFSEFGTITSYKIMRD 349
Query: 214 PNSVLRFA-FVEF-TDEEGARAALSLAGTMLGFYPVRV 249
PN V R + FV F T EE +RA + G M+ P+ V
Sbjct: 350 PNGVSRGSGFVAFSTPEEASRALGEMNGKMIVSKPLYV 387
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 104/258 (40%), Gaps = 49/258 (18%)
Query: 128 FGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGK-RRMNCRTSNAQQ------------D 174
FG + + TDG+ + G+ + + +Q ++N N +Q D
Sbjct: 143 FGQIMSCKIATDGSGQSKGYGFVQFEAEDSAQNAIDKLNGMLINDKQVFVGHFLRKQDRD 202
Query: 175 EVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-E 228
V+ +T VYV ++ + TE+ L F G + + D + + F FV F + E
Sbjct: 203 NVLSKTKFNNVYVKNLSESFTEDDLKNEFGAYGTITSAVLMRDADGRSKCFGFVNFENAE 262
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR------------ 276
+ A+A +L G + V ++ +SE E+E+ R
Sbjct: 263 DAAKAVEALNGKKVDDKEWYVGKAQK-----------KSEREQELKGRFEQTVKESVVDK 311
Query: 277 ----TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIA 331
+Y N+D +T +K F S G + +++ D +R FV F+ E A
Sbjct: 312 FQGLNLYLKNLDDSITDEKLKEMF-SEFGTITSYKIMRDPNGVSRGSGFVAFSTPEEASR 370
Query: 332 AL-NCSGAVLGSLPIRVS 348
AL +G ++ S P+ V+
Sbjct: 371 ALGEMNGKMIVSKPLYVA 388
>gi|395513917|ref|XP_003761168.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein 19
[Sarcophilus harrisii]
Length = 954
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-----LRFAFVEFTDEEGARAA 234
T+++ +++ TEE L +F G V C + N + F FVE+ E A+ A
Sbjct: 718 TLFIKNLNFSTTEEMLKEVFSKVGTVKSCTVSKKKNKAGVLLSMGFGFVEYRKPEQAQKA 777
Query: 235 LS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L L G+++ + + V S+ AI PV + R ++ S+ I NI + + +I+
Sbjct: 778 LKQLQGSVVDGHKLEVKISERAIKPVVTSARQRQTAHKQKTSK-ILVRNIPFQANKQEIR 836
Query: 294 LFFESVCGEVQRLRL----LGDYQHSTRIAFVEFAMAESAIAALNC 335
F S GE++ +RL G H FV+F + A A N
Sbjct: 837 ELF-STFGELKTVRLPKKMTGTGPHRG-FGFVDFLTKQDAKRAFNA 880
>gi|301119623|ref|XP_002907539.1| nucleolin, putative [Phytophthora infestans T30-4]
gi|262106051|gb|EEY64103.1| nucleolin, putative [Phytophthora infestans T30-4]
Length = 496
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGT 240
++++ + TE+++ F CG+V RI AFV F E A AAL++ G
Sbjct: 251 IFIAGLPWSATEDEVKEHFAGCGEVTGARIPLQNGRSSGTAFVTFATSEAAEAALAMDGQ 310
Query: 241 MLG--FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
G + +R K DE+ +++ N+ V + ++ F
Sbjct: 311 DFGGRWMKIRTAEKKNMF------------DEKPEGCTSVFIGNLSWDVDENTVRETF-G 357
Query: 299 VCGEVQRLRLLGDYQHSTRIAF--VEFAMAESAIAALNCSGAVLGSLPIRVSPSKT 352
CGE+ RL D + F V+FA E+ A+ +G+ + IRV+ +K+
Sbjct: 358 ECGEILSCRLATDRETGEFRGFGHVDFASTEAVDEAVKLAGSYVNGRAIRVNYAKS 413
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Query: 155 NGYSQGKRRMNCRTSNAQQ--DEVIR--RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 210
+G G R M RT+ + DE +V++ ++ V E + F CG+++ CR+
Sbjct: 308 DGQDFGGRWMKIRTAEKKNMFDEKPEGCTSVFIGNLSWDVDENTVRETFGECGEILSCRL 367
Query: 211 CGDPNS--VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRV 249
D + F V+F E A+ LAG+ + +RV
Sbjct: 368 ATDRETGEFRGFGHVDFASTEAVDEAVKLAGSYVNGRAIRV 408
>gi|145491019|ref|XP_001431509.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145522722|ref|XP_001447205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398614|emb|CAK64111.1| unnamed protein product [Paramecium tetraurelia]
gi|124414705|emb|CAK79808.1| unnamed protein product [Paramecium tetraurelia]
Length = 260
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 28/178 (15%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T+Y+ ++DQ+VT++ + LF+ CG VV+ I D S + FVEF EE A A+ +
Sbjct: 20 TIYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEFKSEEDADYAIKI 79
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDER-EMCSRTIYCTNIDKKVTQGDIKL 294
M+ Y P++V + S+D+R + ++ N+D T+ D K
Sbjct: 80 M-HMIKLYGKPIKVNKA--------------SQDKRTQEVGANLFIGNLD---TEIDEKT 121
Query: 295 FFE--SVCGEVQRLRLLGDYQH--STRIAFVEFAMAESAIAALNC-SGAVLGSLPIRV 347
+E S G + +++ + + S FV + ES+ AL +G LG+ IRV
Sbjct: 122 LYETFSAFGHILSTKIMRNPETGVSKGYGFVSYDNFESSDGALTAMNGQFLGTKIIRV 179
>gi|164657987|ref|XP_001730119.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
gi|159104014|gb|EDP42905.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
Length = 664
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 19/177 (10%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA 221
CR +Q+D RR +++ ++D+ + + L F G+++ C++ + + L +
Sbjct: 151 CRIMWSQRDPGQRRAGQGNIFIKNLDEAIDNKALHDTFAAFGKILSCKVASNEHGSLGYG 210
Query: 222 FVEFTDEEGARAALSLAGTML----GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT 277
FV + + A AA+ ML Y + K A + +E
Sbjct: 211 FVHYESNDAAEAAIKHVNGMLLNDKKVYVGHHISKKDRQAKI---------EEARAHYTN 261
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
+Y N+D VTQ + + FE G++ + D + +R FV F+ E A A+
Sbjct: 262 VYVKNLDPAVTQEEFEKLFEKY-GKITSAAIATDQEGKSRGFGFVNFSEHEQAAKAV 317
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 70/166 (42%), Gaps = 14/166 (8%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAA 234
+ ++YV +++ V E L +F G V R+C D L +A+V F + E + A
Sbjct: 78 VNTSLYVGELEPNVNEAILFEIFNMVGAVSSIRVCRDTVTRRSLGYAYVNFLNAEDSERA 137
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L L + P+R P + + +P +R I+ N+D+ + +
Sbjct: 138 LE----QLNYTPIRGRPCRIMWSQRDP-------GQRRAGQGNIFIKNLDEAIDNKALHD 186
Query: 295 FFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 340
F + G++ ++ + S FV + ++A AA+ +L
Sbjct: 187 TF-AAFGKILSCKVASNEHGSLGYGFVHYESNDAAEAAIKHVNGML 231
>gi|5032069|ref|NP_005841.1| splicing factor 3B subunit 4 [Homo sapiens]
gi|386781627|ref|NP_001248161.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|114559210|ref|XP_513768.2| PREDICTED: splicing factor 3B subunit 4 isoform 4 [Pan troglodytes]
gi|397492924|ref|XP_003817370.1| PREDICTED: splicing factor 3B subunit 4 [Pan paniscus]
gi|402856043|ref|XP_003892612.1| PREDICTED: splicing factor 3B subunit 4 [Papio anubis]
gi|426331272|ref|XP_004026606.1| PREDICTED: splicing factor 3B subunit 4 [Gorilla gorilla gorilla]
gi|2500587|sp|Q15427.1|SF3B4_HUMAN RecName: Full=Splicing factor 3B subunit 4; AltName:
Full=Pre-mRNA-splicing factor SF3b 49 kDa subunit;
AltName: Full=SF3b50; AltName:
Full=Spliceosome-associated protein 49; Short=SAP 49
gi|556217|gb|AAA60300.1| spliceosomal protein [Homo sapiens]
gi|13279089|gb|AAH04273.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|15530216|gb|AAH13886.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960588|emb|CAI12648.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|55960980|emb|CAI12554.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|60688325|gb|AAH90883.1| Splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|119573980|gb|EAW53595.1| splicing factor 3b, subunit 4, 49kDa [Homo sapiens]
gi|123989960|gb|ABM83897.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|123999284|gb|ABM87219.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|157928508|gb|ABW03550.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|261859948|dbj|BAI46496.1| splicing factor 3b, subunit 4, 49kDa [synthetic construct]
gi|355745635|gb|EHH50260.1| hypothetical protein EGM_01064 [Macaca fascicularis]
gi|380808686|gb|AFE76218.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|383415041|gb|AFH30734.1| splicing factor 3B subunit 4 [Macaca mulatta]
gi|410207952|gb|JAA01195.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410251462|gb|JAA13698.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410292418|gb|JAA24809.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
gi|410337561|gb|JAA37727.1| splicing factor 3b, subunit 4, 49kDa [Pan troglodytes]
Length = 424
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|331228813|ref|XP_003327073.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306063|gb|EFP82654.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 637
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 236
+ VYV + V E L + F +CG +VD R+ D ++ F +++F EGA+ A+
Sbjct: 358 KNVYVGGLSWNVDSEWLKSEFESCGPIVDARVITDRDTQKSKGFGYIDFETCEGAQKAIE 417
Query: 237 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPR--SEDEREMCSRTIYCTNIDKKVTQGDIK 293
GT L ++V S A P R S++E S T++ N+ TQ +
Sbjct: 418 TKNGTELDGRTLKVDLS-APRAERAPAENKRDFSKEELSAESTTLFVGNLPFSATQDSVW 476
Query: 294 LFFESVCGEVQRLRLLGD--YQHSTRIAFVEFAMAESAIAAL 333
F + G+V +RL D Q +VEFA ESA AA+
Sbjct: 477 EIF-AEYGDVNSVRLPTDPETQRVKGFGYVEFATLESARAAV 517
>gi|126313662|ref|XP_001365466.1| PREDICTED: splicing factor 3B subunit 4-like [Monodelphis
domestica]
Length = 424
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|239614479|gb|EEQ91466.1| pre-mRNA splicing factor [Ajellomyces dermatitidis ER-3]
Length = 1294
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
TV V ++ VTE ++ F G+VVD R N+ RF +V+F A AA L
Sbjct: 865 TVIVENLPSDVTELRVRQFFRDYGEVVDIRFPSLKYNTHRRFCYVQFQTASAAHAATELN 924
Query: 239 GTMLGFYPVRVLPSKTAIAPV-----NPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 292
GT ++ +++ P+ +PT R + M R I+ +N+D K T+ D+
Sbjct: 925 GTQQEVSGNSMVSAESTKLPLVVKISDPT--KRQDRTGPMEEGREIHVSNLDWKATEDDL 982
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
F + GEV+ R+ +++ FV F +SA AAL + S P+ V S
Sbjct: 983 VELF-TAYGEVEGARIPRKANGASKGFGFVVFRTKKSAEAALAMHEQLFRSRPLNVHIST 1041
Query: 352 -TPVRPRA 358
TP + +A
Sbjct: 1042 PTPAKRQA 1049
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
R ++VS++D + TE+ L LF G+V RI N + F FV F ++ A AAL++
Sbjct: 966 REIHVSNLDWKATEDDLVELFTAYGEVEGARIPRKANGASKGFGFVVFRTKKSAEAALAM 1025
Query: 238 AGTMLGFYPVRV 249
+ P+ V
Sbjct: 1026 HEQLFRSRPLNV 1037
>gi|296228655|ref|XP_002759903.1| PREDICTED: splicing factor 3B subunit 4 [Callithrix jacchus]
Length = 424
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|261195985|ref|XP_002624396.1| pre-mRNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239587529|gb|EEQ70172.1| pre-mRNA splicing factor [Ajellomyces dermatitidis SLH14081]
Length = 1294
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 12/188 (6%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
TV V ++ VTE ++ F G+VVD R N+ RF +V+F A AA L
Sbjct: 865 TVIVENLPSDVTELRVRQFFRDYGEVVDIRFPSLKYNTHRRFCYVQFQTASAAHAATELN 924
Query: 239 GTMLGFYPVRVLPSKTAIAPV-----NPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 292
GT ++ +++ P+ +PT R + M R I+ +N+D K T+ D+
Sbjct: 925 GTQQEVSGNSMVSAESTKLPLVVKISDPT--KRQDRTGPMEEGREIHVSNLDWKATEDDL 982
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
F + GEV+ R+ +++ FV F +SA AAL + S P+ V S
Sbjct: 983 VELF-TAYGEVEGARIPRKANGASKGFGFVVFRTKKSAEAALAMHEQLFRSRPLNVHIST 1041
Query: 352 -TPVRPRA 358
TP + +A
Sbjct: 1042 PTPAKRQA 1049
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
R ++VS++D + TE+ L LF G+V RI N + F FV F ++ A AAL++
Sbjct: 966 REIHVSNLDWKATEDDLVELFTAYGEVEGARIPRKANGASKGFGFVVFRTKKSAEAALAM 1025
Query: 238 AGTMLGFYPVRV 249
+ P+ V
Sbjct: 1026 HEQLFRSRPLNV 1037
>gi|15219945|ref|NP_173690.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
gi|12643628|sp|O64380.1|PABP3_ARATH RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3
gi|2505869|emb|CAA72907.1| polyA binding protein PAB3 [Arabidopsis thaliana]
gi|15450820|gb|AAK96681.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
gi|332192163|gb|AEE30284.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
Length = 660
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN-SVLRFAFVEFTDEEGA-RAALSL 237
++Y D+D +VTE L LF VV R+C D N L +A++ F++ A RA +L
Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEAL 109
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
T L P+R++ S R R I+ N+D + D K FE
Sbjct: 110 NYTPLFDRPIRIMLSN------------RDPSTRLSGKGNIFIKNLDASI---DNKALFE 154
Query: 298 --SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVL 340
S G + ++ D S FV+F ESA AA++ +L
Sbjct: 155 TFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGML 200
>gi|347966116|ref|XP_321584.5| AGAP001538-PA [Anopheles gambiae str. PEST]
gi|333470203|gb|EAA00839.5| AGAP001538-PA [Anopheles gambiae str. PEST]
Length = 408
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 85/177 (48%), Gaps = 23/177 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T+YV +D +VTE L LF+ G VV+ + D + + + FVEF EE A A+ +
Sbjct: 14 TIYVGGLDDKVTETLLWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFLGEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y P+RV + S ++ + I+ N+D +V + +
Sbjct: 74 M-NMIKLYGKPIRVNKA--------------SAHQKSLDVGANIFIGNLDLEVDEKLLYD 118
Query: 295 FFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 348
F + +Q +++ D + +S AF+ FA E++ AA++ +G L + PI VS
Sbjct: 119 TFSAFGVILQTPKIMRDPETGNSKGFAFINFASFEASDAAMDAMNGQYLCNRPISVS 175
>gi|336259709|ref|XP_003344654.1| hypothetical protein SMAC_07222 [Sordaria macrospora k-hell]
Length = 631
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 7/177 (3%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF EE
Sbjct: 179 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKSEEH 238
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
+AAL L G L PV V ++ T + +Y NI +T+
Sbjct: 239 VQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTESTGHHPNSIPFHRLYVGNIHFSITEQ 298
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
D++ FE GE++ ++L D +R + + + +G L PIRV
Sbjct: 299 DLQNVFEPF-GELEFVQLQKDDNGRSR----GYGFVQPERPSKKMNGFDLAGRPIRV 350
>gi|195487595|ref|XP_002091975.1| GE11925 [Drosophila yakuba]
gi|194178076|gb|EDW91687.1| GE11925 [Drosophila yakuba]
Length = 634
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 25/187 (13%)
Query: 162 RRMNCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV 217
R R +Q+D +RR+ V++ ++D+ + + + F G ++ C++ D
Sbjct: 69 RNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATDEKGN 128
Query: 218 LR-FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
+ + FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 129 SKGYGFVHFETEEAANTSIDKVNGML-------LNGKKVYVG---KFIPRKEREKELGEK 178
Query: 277 T-----IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAE 327
+Y N + +K FFE G++ +++ ++ +AF AE
Sbjct: 179 AKLFTNVYVKNFTEDFDDEKLKEFFEP-YGKITSYKVMSKEDGKSKGFGFVAFETTEAAE 237
Query: 328 SAIAALN 334
+A+ ALN
Sbjct: 238 AAVQALN 244
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
++YV D+ Q V E L F + G V+ R+C D L +A+V F A AL
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD- 61
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
+ F VR P + + +P+ R ++ N+DK + I F
Sbjct: 62 ---TMNFDLVRNKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDKAIDNKAIYDTF- 110
Query: 298 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
S G + ++ D + +++ FV F E+A +++ +L
Sbjct: 111 SAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGML 154
>gi|380494250|emb|CCF33289.1| Poly(A) RNA binding protein [Colletotrichum higginsianum]
Length = 677
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 24/181 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 135 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 194
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE ++A + G +L V V +P K R EM +
Sbjct: 195 GFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 243
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
IY NI +VT + + F + G+V L D + +R FV F E+A A+
Sbjct: 244 FTNIYIKNISGEVTDDEFRDLF-TPFGDVTSSSLARDQEGKSRGFGFVNFTTHEAAAKAV 302
Query: 334 N 334
+
Sbjct: 303 D 303
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 18/173 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + T +G +A
Sbjct: 65 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALEE 124
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 125 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDVAIDNKALHDTF 172
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
+ G + ++ D +++ FV + E+A A+ + +G +L + V
Sbjct: 173 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYV 224
>gi|393245425|gb|EJD52935.1| polyadenylate binding protein [Auricularia delicata TFB-10046 SS5]
Length = 665
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 82/189 (43%), Gaps = 25/189 (13%)
Query: 157 YSQGKRRMNCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 212
YS K R CR +Q+D +R+T +++ ++D+Q+ + L F G V+ C++
Sbjct: 110 YSLIKNRA-CRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVAT 168
Query: 213 DPNSVLR-FAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE-- 268
D + + + FV + E A A+ S+ G +L V V +PR E
Sbjct: 169 DEHGNSKGYGFVHYETAEAAENAIKSVNGMLLNDKKVFV-----------GHHIPRKERQ 217
Query: 269 ---DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFA 324
DE + IY N+D ++ Q + F G + L D + +R FV F
Sbjct: 218 SKIDEMKAQYTNIYVKNLDPELGQEGFEELFGKF-GNITSAALSKDEEGKSRGFGFVNFE 276
Query: 325 MAESAIAAL 333
E A AA+
Sbjct: 277 SHEQAAAAV 285
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 127 GFGYTNNFIMHTDGTANTNG-HTTTRRKRNGY-----SQGKRRMNCRTS--NAQQDEVIR 178
GFG+ N F H A H T R Y + +R R S NA+Q+++ +
Sbjct: 269 GFGFVN-FESHEQAAAAVETLHDTEINGRKLYVARAQKKSEREDELRKSYENAKQEKLSK 327
Query: 179 R---TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD-PNSVLRFAFVEFTD-EEGARA 233
+Y+ +++ + +E+L F G + C++ D N+ F FV F+ +E +A
Sbjct: 328 YQGVNLYIKNLEDDIDDEKLRAEFEPFGTITSCKVMRDEKNTSKGFGFVCFSSPDEATKA 387
Query: 234 ALSLAGTMLGFYPVRV 249
+ M+G P+ V
Sbjct: 388 VSEMNNKMIGSKPLYV 403
>gi|242041385|ref|XP_002468087.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
gi|241921941|gb|EER95085.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
Length = 654
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-SL 237
+YV D+ + V EE L F G V R+C D + LR+ +V + A AL L
Sbjct: 44 LYVGDLHEDVAEEHLFDAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVMALDKL 103
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
+++ P+RV+ S R D R I+ N++ V ++ F
Sbjct: 104 NHSLVLDKPIRVMWSN------------RDPDARRSGVGNIFVKNLNNSVDNASLQELF- 150
Query: 298 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 348
S G+V ++ + ++R FV+FA ESA A+ N +G++ + V+
Sbjct: 151 SKFGDVLSCKVAKNEDGTSRGYGFVQFASQESADEAIGNLNGSLFNDRKLHVA 203
>gi|297744588|emb|CBI37850.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 29/199 (14%)
Query: 164 MNCRTSNAQQDEVI---------RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 214
++CR +++EV +RTV+ I + E + F G+V D R+ D
Sbjct: 13 LSCRRHKDKKEEVAEPEADPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDR 72
Query: 215 NSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK--------TAIAPVNPTFL 264
NS ++EF D A++L+G L PV V PS+ T A P L
Sbjct: 73 NSRRSKGVGYIEFYDAMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGL 132
Query: 265 --PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAF 320
P S +R +Y N+ +T+ ++ FE G V+ ++L D + H F
Sbjct: 133 IGPYSGG-----ARRLYVGNLHFNITEDQLRQVFEPF-GTVELVQLPTDLETGHCKGFGF 186
Query: 321 VEFAMAESAIAALNCSGAV 339
V+FA E A AA + +G +
Sbjct: 187 VQFARLEDARAAQSLNGQL 205
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVE 322
P ++ ER+ RT++ I K + D+ FF S G+V+ +RL+ D + S + ++E
Sbjct: 28 PEADPERD--QRTVFAYQICLKADERDVYEFF-SRAGKVRDVRLIMDRNSRRSKGVGYIE 84
Query: 323 FAMAESAIAALNCSGAVLGSLPIRVSPSK 351
F A S A+ SG L P+ V PS+
Sbjct: 85 FYDAMSVPMAIALSGQPLLGQPVMVKPSE 113
>gi|156099298|ref|XP_001615651.1| splicing factor [Plasmodium vivax Sal-1]
gi|148804525|gb|EDL45924.1| splicing factor, putative [Plasmodium vivax]
Length = 1016
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALN 334
T+ N+D K + DI FF V G+V+ ++ + D + S +A+VEF +S + AL+
Sbjct: 626 TVLVLNLDLKADERDIYEFFSEVAGKVRDIQCIKDQRSGKSKGVAYVEFYTQDSVVKALS 685
Query: 335 CSGAVLGSLPIRVSPSKTPVRPRAPRPPLH 364
+G +L + PI++ S+ + RA + H
Sbjct: 686 ANGYMLKNRPIKIQSSQAE-KNRAAKAAKH 714
>gi|9930616|gb|AAG02117.1|AF293840_1 poly(A) binding protein [Arabidopsis thaliana]
Length = 660
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN-SVLRFAFVEFTDEEGA-RAALSL 237
++Y D+D +VTE L LF VV R+C D N L +A++ F++ A RA +L
Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEAL 109
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
T L P+R++ S R R I+ N+D + D K FE
Sbjct: 110 NYTPLFDRPIRIMLSN------------RDPSTRLSGKGNIFIKNLDASI---DNKALFE 154
Query: 298 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
S G + ++ D ++ FV+F ESA AA++ +L
Sbjct: 155 TFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGML 200
>gi|403417917|emb|CCM04617.1| predicted protein [Fibroporia radiculosa]
Length = 671
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 15/184 (8%)
Query: 157 YSQGKRRMNCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 212
YS K R CR +Q+D +R+T +++ ++D+Q+ + L F G V+ C++
Sbjct: 107 YSSIKGRA-CRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVAT 165
Query: 213 DPNSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
D + + + FV + E A A+ ML L K + + R
Sbjct: 166 DEHGRSKGYGFVHYETAEAAETAIKAVNGML-------LNDKKVYVGYHISRKERQSKLE 218
Query: 272 EMCSR--TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESA 329
EM ++ IY N D +VT+ + F+ + D S FV F + + A
Sbjct: 219 EMKAQFTNIYVKNFDPEVTEEEFMALFQQFGSVTSAVIQRDDEGRSRGFGFVNFEVHDEA 278
Query: 330 IAAL 333
A+
Sbjct: 279 QKAV 282
>gi|146165272|ref|XP_001014712.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila]
gi|146145520|gb|EAR94568.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila
SB210]
Length = 261
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGA 231
D ++R+V+VS + + + F CG + + ++ D ++ + + F+ E A
Sbjct: 19 DPSLKRSVFVSGLPYSADTDAIKEYFQNCGTIENIKLPRYQDTGKIIGYCHLVFSTPEEA 78
Query: 232 RAALSLAGTMLG--FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 289
+ A+ L ++ + + + + + N P E C+ TI+ N+ T+
Sbjct: 79 QEAIKLNKQVMNGRYLDISLAKGEKKVEYKNDVKAP------EDCT-TIFVKNLAFDCTE 131
Query: 290 GDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAMAESAIAALNCSGA 338
++ FFE CG+V +R + Y +H AF+EF M S AAL +G
Sbjct: 132 DEVGEFFEK-CGKVVNVRFVYHYSQKHFKGFAFIEFKMNSSVNAALKLNGT 181
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALS 236
RTV+ + Q+V L F + G+V D R+ C A++EF D E AL
Sbjct: 260 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALALG 319
Query: 237 LAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L+G L P+ V + K + P F P++ +Y ++ +T+ ++
Sbjct: 320 LSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKA----HTGPMRLYVGSLHFNITEDMLR 375
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
FE G++ ++L+ D + S F+ + A+ A AL +G L P++V
Sbjct: 376 GIFEPF-GKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRPMKV 431
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 17/115 (14%)
Query: 261 PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHSTRI 318
PT L S +ER+ +RT++C + ++V D++ FF SV G+V+ +RL+ + I
Sbjct: 249 PTEL--SPEERD--ARTVFCIQLSQRVRARDLEEFFSSV-GKVRDVRLITCNKTKRFKGI 303
Query: 319 AFVEFAMAESAIAALNCSGAVLGSLPI----------RVSPSKTPVRPRAPRPPL 363
A++EF ES AL SG L +PI R+ + P +P+A P+
Sbjct: 304 AYIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKAHTGPM 358
>gi|134077058|emb|CAK39931.1| unnamed protein product [Aspergillus niger]
Length = 497
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV----LRFAFVEFTDEEG 230
E +R +YV +D +VTE+ L +F T G VV +I D N + FVEF D
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGA 146
Query: 231 A-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVT 288
A RA +L G + +R VN + S ++ + + I+ ++ +V
Sbjct: 147 AERAMQTLNGRRIHQSEIR----------VNWAYQSNSTNKEDTSNHFHIFVGDLSNEVN 196
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSL 343
++ L S G V R++ D + +AF E + A+ A+++++ G LGS
Sbjct: 197 D-EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMD--GEWLGSR 253
Query: 344 PIR 346
IR
Sbjct: 254 AIR 256
>gi|296423176|ref|XP_002841131.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637365|emb|CAZ85322.1| unnamed protein product [Tuber melanosporum]
Length = 498
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 19/179 (10%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 232
E +R +YV +D +VTEE L +F T G V + +I D NS + F+E+ D A R
Sbjct: 82 EPNKRALYVGGLDPRVTEEILKQIFETTGHVQNVKIIPDKNSKGYNYGFIEYDDPGAAER 141
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
A +L G + +RV + + +S E I+ ++ +V +
Sbjct: 142 AMQTLNGRRIHQAEIRVNWAYQSN---------QSSKEDTTNHFHIFVGDLSNEVNDEVL 192
Query: 293 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIR 346
F S G V R++ D + S FV F A AE A+++++ G LGS IR
Sbjct: 193 MQAF-STFGSVSEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMD--GEWLGSRAIR 248
>gi|224063493|ref|XP_002301171.1| predicted protein [Populus trichocarpa]
gi|222842897|gb|EEE80444.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 15/169 (8%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 232
+ + ++YV D+D VT+ QL LF GQVV R+C D ++ L + +V +++ + A
Sbjct: 27 QFVPTSLYVGDLDFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAA 86
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL + L F P+ P + + +P+ R+ I+ N+DK + +
Sbjct: 87 RALDV----LNFTPLNNKPLRIMYSHRDPSI-------RKSGMANIFIKNLDKTIDHKAL 135
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
F S G + ++ D ++ FV+F E+A A++ +L
Sbjct: 136 HDTFSSF-GNILSCKVATDASGQSKGYGFVQFDSEEAAQNAIDKLNGML 183
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D V +E+L LF G + C++ DP+ + R + FV F T EE +RA L
Sbjct: 314 LYIKNLDDSVNDEKLKELFSDFGTITSCKVMHDPSGISRGSGFVAFSTPEEASRALAELN 373
Query: 239 GTMLGFYPVRVLPSK 253
G M+ P+ V P++
Sbjct: 374 GKMVVSKPLYVAPAQ 388
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 8/185 (4%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSLA 238
+YV ++ + T+E L ++F G + + D + + F FV F + ++ A+A +L
Sbjct: 212 IYVKNLAESTTDEDLKSIFEEHGAITSAVVMRDADGKSKCFGFVNFENVDDAAKAVEALN 271
Query: 239 GTMLG---FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
G +Y + + F E + + +Y N+D V +K
Sbjct: 272 GKKFDDKEWYVGKAQKKSERELELKGRFEQSLESVEKYQAVNLYIKNLDDSVNDEKLKEL 331
Query: 296 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSPSKTP 353
F S G + +++ D +R FV F+ E A AL +G ++ S P+ V+P++
Sbjct: 332 F-SDFGTITSCKVMHDPSGISRGSGFVAFSTPEEASRALAELNGKMVVSKPLYVAPAQRK 390
Query: 354 VRPRA 358
RA
Sbjct: 391 EERRA 395
>gi|45201218|ref|NP_986788.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|74691820|sp|Q74ZS6.1|PABP_ASHGO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|44986072|gb|AAS54612.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|374110037|gb|AEY98942.1| FAGR122Cp [Ashbya gossypii FDAG1]
Length = 585
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+ +Y+ ++ + + L F T G ++ C++ D N V R F
Sbjct: 109 CRIMWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVATDENGVSRGF 168
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 278
FV F +E AR A+ ML + + ++ + R E+ ++ +
Sbjct: 169 GFVHFENESDARDAIEAVDGML-------MNDQEVYVALHVSKKDRQSKLEEVKAKFTNV 221
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF---AMAESAIAALN 334
Y NID++ +Q + + F G++ L D + R FV F A A A+ LN
Sbjct: 222 YVKNIDQETSQEEFEELF-GKYGKITSAVLEKDSEGKLRGFGFVNFEDHAAAAKAVDELN 280
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEE-GARAALS 236
++YV +++ V+E L +F G V R+C D N+ L +A+V F D E G +A
Sbjct: 39 SLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAIEQ 98
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ S IY N+ + + F
Sbjct: 99 LNYTLIKGKPCRIMWSQ------------RDPSLRKKGSGNIYIKNLHPAIDNKSLHETF 146
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
S G + ++ D +R FV F A A+ +L
Sbjct: 147 -STFGNILSCKVATDENGVSRGFGFVHFENESDARDAIEAVDGML 190
>gi|307206655|gb|EFN84627.1| Nucleolysin TIAR [Harpegnathos saltator]
Length = 274
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 39/168 (23%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
+E RT+YV ++D V+E+ L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 EESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQCA-- 59
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM--------CSRTIYCTNIDK 285
TA+A +N RS ++EM + T+YC
Sbjct: 60 -------------------ATALAAMN----KRSFLDKEMKVYNQSSPTNCTVYCGGFTN 96
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 333
+T IK F S G +Q +R+ + + AF++F E+A A+
Sbjct: 97 GITDELIKKTF-SPFGTIQDIRVFKEKGY----AFIKFTTKEAATHAI 139
>gi|357110952|ref|XP_003557279.1| PREDICTED: protein MEI2-like 2-like [Brachypodium distachyon]
Length = 845
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 17/174 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL-SL 237
RT++V +I+ V + +L +LF G D R F + + D AR A+ SL
Sbjct: 198 RTLFVRNINSNVEDSELRSLFEQFG---DIRTLYTATKHRGFVMISYFDIRAARGAMRSL 254
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L R L +I NP+ ++++ T+ N+D V+ D++ F
Sbjct: 255 QNKPLR---RRKLDIHFSIPKENPS-------DKDLNQGTLVIFNLDPSVSNEDVRQIF- 303
Query: 298 SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
GEV+ +R + +H I F + AE+A+ +LN S + G I++ PS+
Sbjct: 304 GAYGEVKEIRETPNKKHHKFIEFYDVRAAEAALRSLNKS-EIAGKR-IKLEPSR 355
>gi|398404546|ref|XP_003853739.1| hypothetical protein MYCGRDRAFT_56466 [Zymoseptoria tritici IPO323]
gi|339473622|gb|EGP88715.1| hypothetical protein MYCGRDRAFT_56466 [Zymoseptoria tritici IPO323]
Length = 763
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D ++R+T V++ ++D + + L F G ++ C++ D N+ + +
Sbjct: 124 CRIMWSQRDPLLRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDENANSKGY 183
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + E A A+ ++ G +L V V +P K ++ V +E +
Sbjct: 184 GFVHYETAEAANQAIKNVNGMLLNEKKVFVGHHIPKKDRMSKV---------EEMKANFT 234
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR--IAFVEFAMAESAIAAL 333
IY NID + T + + FE G++ L D + FV + E A A+
Sbjct: 235 NIYVKNIDSETTDNEFRELFEKY-GDITSASLAHDNESGKNRGFGFVNYIRHEDAYKAV 292
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 18/172 (10%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALSL 237
+YV ++D VTE L LF + GQV R+C D L +A+V + +G RA L
Sbjct: 55 LYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNVAGDGERALEEL 114
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 115 NYTLIKGRPCRIMWSQR-----DPLL-------RKTGQGNVFIKNLDAAIDNKALHDTF- 161
Query: 298 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
+ G + ++ D +++ FV + AE+A A+ N +G +L + V
Sbjct: 162 AAFGNILSCKVAQDENANSKGYGFVHYETAEAANQAIKNVNGMLLNEKKVFV 213
>gi|242062048|ref|XP_002452313.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
gi|241932144|gb|EES05289.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
Length = 435
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 157 YSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD-CRICGDPN 215
YS G++R + + +++V D+ VT+E L LF + V ++ D N
Sbjct: 189 YSMGEKRTELSSDH---------SIFVGDLAVDVTDEMLLELFSNKYRSVKGAKVIIDAN 239
Query: 216 SVLR--FAFVEFTDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE 272
+ + FV F D+ A++ + G P+RV P+ + + P + + +
Sbjct: 240 TGRSRGYGFVRFGDDNDKTHAMTEMNGVYCSTRPIRVGPATPRRSQGDSGSSPPRQSDVD 299
Query: 273 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA 332
+RT+Y +D V++ +++ F G++ +++ Q + FV A AE A+
Sbjct: 300 STNRTVYVGGLDPNVSEDELRKAFAKY-GDLASVKIPFGKQ-CGFVQFVNRADAEEALQG 357
Query: 333 LNCSGAVLGSLPIRVSPSKTP 353
LN GA +G +R+S ++P
Sbjct: 358 LN--GATIGKQAVRLSWGRSP 376
>gi|290996979|ref|XP_002681059.1| RRM domain-containing protein [Naegleria gruberi]
gi|284094682|gb|EFC48315.1| RRM domain-containing protein [Naegleria gruberi]
Length = 285
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 76/178 (42%), Gaps = 21/178 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLA 238
TV + ++ +++ + G +V I D R + FVEF + E A+ + L
Sbjct: 52 TVMLRNLSYNTSDDSIKEKLSKYGSIVRVNIPTDERGRSRGYGFVEFDEVEAAQKVVDLK 111
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--IYCTNIDKKVTQGDIKLFF 296
+ V++ SK E RT ++ N+ + + DI+ F
Sbjct: 112 AMEMDGREVQLQQSKARD---------------EFSGRTTQVFVGNLPESAEEQDIRELF 156
Query: 297 ESVCGEVQRLRLLGDYQHSTR--IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKT 352
E+ CGE++ +R+ D + AFV+F + S AAL G+ + IRV+ K+
Sbjct: 157 ET-CGEIEEVRMPKDKDTEKKKGFAFVQFRDSSSVKAALEKDGSEFKGVSIRVNEEKS 213
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 164 MNCRTSNAQQ----DEVIRRT--VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV 217
M+ R QQ DE RT V+V ++ + E+ + LF TCG++ + R+ D ++
Sbjct: 115 MDGREVQLQQSKARDEFSGRTTQVFVGNLPESAEEQDIRELFETCGEIEEVRMPKDKDTE 174
Query: 218 LR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKT 254
+ FAFV+F D +AAL G+ +RV K+
Sbjct: 175 KKKGFAFVQFRDSSSVKAALEKDGSEFKGVSIRVNEEKS 213
>gi|17136378|ref|NP_476667.1| polyA-binding protein, isoform A [Drosophila melanogaster]
gi|24654793|ref|NP_725749.1| polyA-binding protein, isoform B [Drosophila melanogaster]
gi|24654797|ref|NP_725750.1| polyA-binding protein, isoform C [Drosophila melanogaster]
gi|195335482|ref|XP_002034394.1| GM21847 [Drosophila sechellia]
gi|76803808|sp|P21187.3|PABP_DROME RecName: Full=Polyadenylate-binding protein; Short=PABP;
Short=Poly(A)-binding protein
gi|7302665|gb|AAF57745.1| polyA-binding protein, isoform B [Drosophila melanogaster]
gi|7302666|gb|AAF57746.1| polyA-binding protein, isoform C [Drosophila melanogaster]
gi|21428474|gb|AAM49897.1| LD24412p [Drosophila melanogaster]
gi|21626472|gb|AAM68175.1| polyA-binding protein, isoform A [Drosophila melanogaster]
gi|194126364|gb|EDW48407.1| GM21847 [Drosophila sechellia]
gi|220946756|gb|ACL85921.1| pAbp-PA [synthetic construct]
Length = 634
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 25/187 (13%)
Query: 162 RRMNCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV 217
R R +Q+D +RR+ V++ ++D+ + + + F G ++ C++ D
Sbjct: 69 RNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGN 128
Query: 218 LR-FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
+ + FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 129 SKGYGFVHFETEEAANTSIDKVNGML-------LNGKKVYVG---KFIPRKEREKELGEK 178
Query: 277 T-----IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAE 327
+Y N + +K FFE G++ +++ ++ +AF AE
Sbjct: 179 AKLFTNVYVKNFTEDFDDEKLKEFFEP-YGKITSYKVMSKEDGKSKGFGFVAFETTEAAE 237
Query: 328 SAIAALN 334
+A+ ALN
Sbjct: 238 AAVQALN 244
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
++YV D+ Q V E L F + G V+ R+C D L +A+V F A AL
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD- 61
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
+ F VR P + + +P+ R ++ N+D+ + I F
Sbjct: 62 ---TMNFDLVRNKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDRAIDNKAIYDTF- 110
Query: 298 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
S G + ++ D + +++ FV F E+A +++ +L
Sbjct: 111 SAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGML 154
>gi|387018636|gb|AFJ51436.1| Splicing factor 3B subunit 4-like [Crotalus adamanteus]
Length = 417
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|225682885|gb|EEH21169.1| nucleolysin TIA-1 [Paracoccidioides brasiliensis Pb03]
Length = 471
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 21/180 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 232
E +R +YV +D +VTE+ L +F T G V +I D NS L + FVE+ D A R
Sbjct: 96 EPNKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAER 155
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 291
A +L G + +R VN + S ++ + + I+ ++ +V +
Sbjct: 156 AMATLNGRRVHQSEIR----------VNWAYQSNSNNKEDTSNHFHIFVGDLSNEVND-E 204
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 346
+ L S G V R++ D + +AF E + AE A+++++ G LGS IR
Sbjct: 205 VLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMD--GEWLGSRAIR 262
>gi|253683353|dbj|BAH84828.1| TIA-1-related RNA binding protein [Spodoptera frugiperda]
Length = 283
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 21/196 (10%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D VTE + TLF G+V C+I +P + +AF+EFT A
Sbjct: 3 DESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGND-PYAFLEFTSHTAAAT 61
Query: 234 ALSLAGTMLGFYPVRVLPSKTAI-APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL+ + VL + + +P P+++ I+ ++ ++ +
Sbjct: 62 ALAAMNKRV------VLDKEMKVNWATSPGNQPKTDTSNH---HHIFVGDLSPEIETHIL 112
Query: 293 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIRV 347
+ F GE+ R++ D Q S AFV F A AE+AI A+N G LGS IR
Sbjct: 113 RDAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMN--GQWLGSRSIRT 169
Query: 348 SPS--KTPVRPRAPRP 361
+ S K P +P P
Sbjct: 170 NWSTRKPPSKPNEGAP 185
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 23/192 (11%)
Query: 163 RMNCRTSNAQQ---DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
++N TS Q D ++V D+ ++ L F G++ +CRI DP ++
Sbjct: 77 KVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKS 136
Query: 220 --FAFVEFTDEEGARAAL-SLAGTMLGF------YPVRVLPSK------TAIAPVNPTFL 264
+AFV F + A AA+ ++ G LG + R PSK ++ PTF
Sbjct: 137 KGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPNEGAPSSKRAKQPTF- 195
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
++ + T+YC V D+ S G++Q +R+ D + AF+ F
Sbjct: 196 DEVYNQSSPTNTTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVFRDKGY----AFIRFT 251
Query: 325 MAESAIAALNCS 336
E+A A+ +
Sbjct: 252 TKEAAAHAIEAT 263
>gi|408390203|gb|EKJ69609.1| hypothetical protein FPSE_10205 [Fusarium pseudograminearum CS3096]
Length = 1080
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 30/209 (14%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALS 236
R TVYV++ + + LF CG+++ R N+ RF +V F D+E + A+
Sbjct: 673 RLTVYVTNYPPAADQNYIRNLFRDCGEILSIRWPSLKVNTHRRFCYVSFRDQEASAKAVE 732
Query: 237 LAGTMLGFYPVRVLPSKTAIAP----VNPTFLPRSEDEREMC---SRTIYCTNIDKKVTQ 289
L GT+L P T + V P + RE R I+ +N+D+ +++
Sbjct: 733 LDGTVLE-------PDGTVLEKRFKLVVKYSDPGYKKAREGALAEGREIHISNLDRSISE 785
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAM---AESAIAALNCSG------AV 339
++K F S G + R+ + + AF++FA AE A+A +N + AV
Sbjct: 786 TELKEVF-SKYGNITRVNIPATLAGKNKGFAFIDFAAKEGAEKAVAEMNNTKFRSQILAV 844
Query: 340 LGSLPIRVSP-SKTPVRPRA---PRPPLH 364
S R+ P +KT V A P P H
Sbjct: 845 ALSKESRIKPAAKTIVTDNARGSPAPSSH 873
>gi|340522219|gb|EGR52452.1| predicted protein [Trichoderma reesei QM6a]
Length = 477
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 232
E +R +YV +DQ+VTE+ L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 71 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAER 130
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 291
A +L G + +R VN + + + + + I+ ++ +V D
Sbjct: 131 AMQTLNGRRVHQSEIR----------VNWAYQSNTTSKEDTSNHFHIFVGDLSNEVND-D 179
Query: 292 IKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIR 346
I + S G V R++ D + S FV F AE A+++++ G LGS IR
Sbjct: 180 ILMQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMD--GEWLGSRAIR 237
>gi|322711066|gb|EFZ02640.1| poly(A) RNA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 743
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 132 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 191
Query: 221 AFVEFTDEEGARAALSLAGTML----GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + +E A A+ ML Y +P K R EM +
Sbjct: 192 GFVHYETDEAAHQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 240
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
IY NI + + + + FE G++ L D + +R FV F ESA A+
Sbjct: 241 FTNIYIKNISTEASDDEFRELFEKY-GDITSSSLARDQEGKSRGFGFVNFTTHESAAKAV 299
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 18/173 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + + +G +A
Sbjct: 62 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALEE 121
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 122 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDVAIDNKALHDTF 169
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
+ G + ++ D +++ FV + E+A A+ + +G +L + V
Sbjct: 170 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAAHQAIKHVNGMLLNEKKVYV 221
>gi|195338839|ref|XP_002036031.1| GM16278 [Drosophila sechellia]
gi|194129911|gb|EDW51954.1| GM16278 [Drosophila sechellia]
Length = 596
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 15/193 (7%)
Query: 148 TTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 207
T + R+R+ + +R S ++D RTV+ + Q+V L F + G+V D
Sbjct: 211 TNSPRRRSPANGAERTTPTELSPEERDA---RTVFCIQLSQRVRARDLEEFFSSVGKVRD 267
Query: 208 CRI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPT 262
R+ C A++EF D E AL L+G L P+ V + K + P
Sbjct: 268 VRLITCNKTKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPA 327
Query: 263 FLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAF 320
F P+S +Y ++ +T+ ++ FE G++ ++L+ D + S F
Sbjct: 328 FQPKS----HTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDAIQLIMDTETGRSKGYGF 382
Query: 321 VEFAMAESAIAAL 333
+ + A+ A AL
Sbjct: 383 ITYHNADDAKKAL 395
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Query: 261 PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHSTRI 318
PT L S +ER+ +RT++C + ++V D++ FF SV G+V+ +RL+ + I
Sbjct: 228 PTEL--SPEERD--ARTVFCIQLSQRVRARDLEEFFSSV-GKVRDVRLITCNKTKRFKGI 282
Query: 319 AFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
A++EF ES AL SG L +PI V ++
Sbjct: 283 AYIEFDDPESVALALGLSGQRLLGVPIMVQHTQ 315
>gi|324497903|gb|ADY39600.1| putative TIA1 protein [Hottentotta judaicus]
Length = 196
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 21/175 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 239
T+YV ++D VTEE + LF G V+ C+I +P + + FVEFTD + A AAL
Sbjct: 1 TLYVGNLDPSVTEELILALFTQIGPVIGCKIIHEPGND-PYCFVEFTDHQAAAAALLAMN 59
Query: 240 T--MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
LG + + A +P N P+ + + I+ ++ ++ +K F
Sbjct: 60 KRQCLG----KEMKVNWATSPGN---TPKQDTSKHY---HIFVGDLSPEIETQQLKEAFA 109
Query: 298 SVCGEVQRLRLLGDYQ--HSTRIAFVEFAM---AESAIAALNCSGAVLGSLPIRV 347
GE+ R++ D Q S FV F AE+AIA +N G LGS IR
Sbjct: 110 PF-GEISDCRVVRDPQTLKSKGYGFVSFVKKTDAENAIATMN--GQWLGSRAIRT 161
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 163 RMNCRTS---NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
++N TS +QD ++V D+ ++ +QL F G++ DCR+ DP ++
Sbjct: 69 KVNWATSPGNTPKQDTSKHYHIFVGDLSPEIETQQLKEAFAPFGEISDCRVVRDPQTLKS 128
Query: 220 --FAFVEFTDEEGARAAL-SLAGTMLGFYPVRV 249
+ FV F + A A+ ++ G LG +R
Sbjct: 129 KGYGFVSFVKKTDAENAIATMNGQWLGSRAIRT 161
>gi|294875884|ref|XP_002767464.1| polyadenylate-binding protein 1-A, putative [Perkinsus marinus ATCC
50983]
gi|239869099|gb|EER00182.1| polyadenylate-binding protein 1-A, putative [Perkinsus marinus ATCC
50983]
Length = 230
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 171 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 225
+ +D +RR+ VYV ++D+ + + L F G ++ C++ P+ R F FV F
Sbjct: 3 SHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVALTPDGKSRGFGFVHF 62
Query: 226 TDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 284
+E A AA++ L G +G V V P K + T P++ +Y +I
Sbjct: 63 ESDESAEAAIAKLNGMQIGEKTVYVAPFKKTAERNDGT--PKN-------FTNVYIKHIP 113
Query: 285 KKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 333
+ IK F GE+ L + D + R AFV +A E A AA+
Sbjct: 114 ASWNEEKIKEEF-GAFGEITSLAVQTDPK-GRRFAFVNYAEFEQARAAV 160
>gi|21553746|gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
Length = 560
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 82/184 (44%), Gaps = 19/184 (10%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL 235
+RTV+ I + TE + F G+V D RI D S +VEF D A+
Sbjct: 181 QRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMAI 240
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPT---------FLPRSEDEREMCSRTIYCTNIDKK 286
+L+G L PV V PS+ V T P S +R +Y N+
Sbjct: 241 ALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYS-----GGARRLYVGNLHIN 295
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLP 344
+++ D++ FES G V+ +++ D + FV+FA E A ALN +G + +
Sbjct: 296 MSEDDLRKVFESF-GSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLNGQLEIAGRA 354
Query: 345 IRVS 348
I+VS
Sbjct: 355 IKVS 358
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVE 322
P ++ ER+ RT++ I + T+ D+ FF S G+V+ +R++ D + S I +VE
Sbjct: 173 PEADPERDQ--RTVFAYQIALRATERDVYEFF-SRAGKVRDVRIIMDRISRRSRGIGYVE 229
Query: 323 FAMAESAIAALNCSGAVLGSLPIRVSPSK 351
F S A+ SG L P+ V PS+
Sbjct: 230 FYDTMSVPMAIALSGQPLLGQPVMVKPSE 258
>gi|167533335|ref|XP_001748347.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773159|gb|EDQ86802.1| predicted protein [Monosiga brevicollis MX1]
Length = 406
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 32/168 (19%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDC-----RICGDPNSVLRFAFVEFTDEEGARAA 234
TVYV +D +V EE + LFL G VV R+ G S + FVEF E+ A A
Sbjct: 14 TVYVGGLDDKVDEELVWELFLQAGPVVSVHMPKDRVSGAHQS---YGFVEFLGEDDAEYA 70
Query: 235 LSLAGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
L + M+ Y P+RV +K+A S + +Y N+ +V D
Sbjct: 71 LKIL-NMINVYGKPIRV--NKSA-----------SHSKHMEVGANLYIGNLAPEV---DE 113
Query: 293 KLFFESVCG---EVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNC 335
KL F++ +Q +++ D + HS AF+ +A E++ AA+
Sbjct: 114 KLLFDTFSAFGVILQHPKVMRDLETGHSKGFAFINYATFEASDAAIKA 161
>gi|292616346|ref|XP_002662984.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
gi|292616348|ref|XP_002662985.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
Length = 163
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDC-----RICGDPNSVLRFAFVEFTDEEGAR 232
RR++YV ++D T ++L F +CG V R G P FA++EF+D E R
Sbjct: 36 RRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKG---FAYIEFSDRESVR 92
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
A++L T+ ++V P +T I + T
Sbjct: 93 TAMALDETLFRGRVIKVSPKRTNIPGFSTT 122
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 257 APVNPTFLPRSEDER-EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRL-----RLLG 310
+P F + +ER + R+IY N+D T +++++F S CG V R+ R G
Sbjct: 17 SPEAELFFDMTHEERIDSDRRSIYVGNVDYGATADELEMYFNS-CGHVNRVTIPYNRFTG 75
Query: 311 DYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPV 354
H A++EF+ ES A+ + I+VSP +T +
Sbjct: 76 ---HPKGFAYIEFSDRESVRTAMALDETLFRGRVIKVSPKRTNI 116
>gi|389742195|gb|EIM83382.1| polyadenylate-binding protein [Stereum hirsutum FP-91666 SS1]
Length = 422
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 36/202 (17%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
V+V D+ +V ++ LA F G + D R+ D NS + F+ F D+ A A+ ++
Sbjct: 109 VFVGDLSPEVNDDVLAKAFAAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 168
Query: 238 AGTMLGFYPVRV-------------------LPSKT----AIAPVNPTFLPRSED----E 270
G LG +RV P++T A AP+N P S + +
Sbjct: 169 NGEWLGSRAIRVNWANQKTQGGLPVSGGPTASPTRTGAGGAPAPINFQGGPLSYESVVQQ 228
Query: 271 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAE-SA 329
+ T+Y N+ TQ D+ F+S+ G + +R+ D AFV+ E +A
Sbjct: 229 TPAFNTTVYVGNLVPYCTQSDLIPLFQSI-GYLSEIRMQAD----RGFAFVKLDTHEHAA 283
Query: 330 IAALNCSGAVLGSLPIRVSPSK 351
+A + G ++ PI+ S K
Sbjct: 284 MAIVQLQGQLVHGRPIKCSWGK 305
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 22/179 (12%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGARAA 234
R +YV ++ +VTE L +F G V +I D N L + FVE+ D A A
Sbjct: 15 RAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETA 74
Query: 235 L-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L +L G + +R VN + + E ++ ++ +V +
Sbjct: 75 LQTLNGRKIFDTEIR----------VNWAYQGQQNKEDTSNHFHVFVGDLSPEVNDDVLA 124
Query: 294 LFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
F + G + R++ D +AF + AE AIA +N G LGS IRV
Sbjct: 125 KAF-AAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMN--GEWLGSRAIRV 180
>gi|194758325|ref|XP_001961412.1| GF14957 [Drosophila ananassae]
gi|190615109|gb|EDV30633.1| GF14957 [Drosophila ananassae]
Length = 594
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 12/162 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALS 236
RTV+ + Q+V L F + G+V D R+ C A++EF D E AL
Sbjct: 237 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLILCNKTKRFKGIAYIEFEDPESVALALG 296
Query: 237 LAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L+G L P+ V + K + P F P+S +Y ++ +T+ ++
Sbjct: 297 LSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKS----HTGPMRLYVGSLHFNITEDMLR 352
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL 333
FE G++ ++L+ D + S F+ + A+ A AL
Sbjct: 353 GIFEPF-GKIDAIQLIMDTETGRSKGYGFITYHNADDAKKAL 393
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 244 FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 303
+ P R P+ A P P E +RT++C + ++V D++ FF SV G+V
Sbjct: 208 YSPRRRSPANGAGGDRTP---PTELSPEERDARTVFCIQLSQRVRARDLEEFFSSV-GKV 263
Query: 304 QRLRLL--GDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
+ +RL+ + IA++EF ES AL SG L +PI V
Sbjct: 264 RDVRLILCNKTKRFKGIAYIEFEDPESVALALGLSGQRLLGVPIMV 309
>gi|67517282|ref|XP_658521.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|40746790|gb|EAA65946.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|259488796|tpe|CBF88530.1| TPA: RNA splicing factor (Pad-1), putative (AFU_orthologue;
AFUA_1G15810) [Aspergillus nidulans FGSC A4]
Length = 552
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 80/196 (40%), Gaps = 27/196 (13%)
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFA 221
R+ +DE RRT++V + ++ ++L F G Q+V R+ G V
Sbjct: 162 RSPELNEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---G 218
Query: 222 FVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS------ 275
+VEF DE A+ L G L P+ IA + R E S
Sbjct: 219 YVEFKDESSVAPAIQLTGQKLLGIPI--------IAQLTEAEKNRQARNSEASSGNKHSA 270
Query: 276 --RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAA 332
+Y NI + + D++ FE GE++ ++L D +R FV+F A A
Sbjct: 271 PFHRLYVGNIHFSIDENDLQSVFEPF-GELEFVQLQKDETGRSRGYGFVQFRDPNQAREA 329
Query: 333 L-NCSGAVLGSLPIRV 347
L +G LG IRV
Sbjct: 330 LEKMNGYDLGGRAIRV 345
>gi|357631053|gb|EHJ78771.1| hypothetical protein KGM_03904 [Danaus plexippus]
Length = 591
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 13/190 (6%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEE 229
QQ + VYV I ++ E+ + FL G + + DP + FAFVE+ E
Sbjct: 133 QQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPE 192
Query: 230 GARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
A+ +L + G MLG ++V+ + + P + ++E + +R IY +I ++T
Sbjct: 193 AAQLSLEQMNGVMLGGRNIKVV-GRPSNMPQAQAVIDEIQEEAKQYNR-IYVASIHPELT 250
Query: 289 QGDIKLFFESVCGEVQRLRL-LGDYQHSTR-IAFVEFAM---AESAIAALNCSGAVLGSL 343
+ DIK FE+ G + +L G H + F+E+A A AIA++N LG
Sbjct: 251 EDDIKNVFEAF-GPITYCKLAYGASAHKHKGYGFIEYATLPAALEAIASMNLFD--LGGQ 307
Query: 344 PIRVSPSKTP 353
+RV + TP
Sbjct: 308 YLRVGRAITP 317
>gi|255586946|ref|XP_002534073.1| RNA-binding protein, putative [Ricinus communis]
gi|223525900|gb|EEF28317.1| RNA-binding protein, putative [Ricinus communis]
Length = 779
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 23/177 (12%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDCRICGDPNSVLRFAFVEFTDEEGARAA 234
RT++V +I+ V + +L +LF G + C+ G F + + D ARAA
Sbjct: 156 RTLFVRNINSNVEDSELKSLFEQYGDIRTLYTACKHRG-------FVMISYYDIRDARAA 208
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
+ G R L +I NP+ E+++ T+ N+D V+ D++
Sbjct: 209 MR--GLQNKPLRRRKLDIHFSIPKDNPS-------EKDINQGTLVVFNLDASVSNDDLRQ 259
Query: 295 FFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
F GEV+ +R +H I F + AE+A+ ALN S + I++ PS+
Sbjct: 260 IF-GAYGEVKEIRETPHKRHHKFIEFYDVRSAEAALRALNRSD--IAGKRIKLEPSR 313
>gi|385302465|gb|EIF46595.1| polyadenylate-binding protein 2 [Dekkera bruxellensis AWRI1499]
Length = 234
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEG 230
Q E+ RR+VYV +ID T L + CG++ I + + FA+VEF D EG
Sbjct: 76 QREIDRRSVYVGNIDYSATTADLKKVLDDCGEINRITILYNHYTGRSKGFAYVEFNDVEG 135
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAI 256
A+AA+ L GT L + + +T I
Sbjct: 136 AKAAIELNGTELYSRALTIQQKRTNI 161
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 270 EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQH----STRIAFVEFAM 325
+RE+ R++Y NID T D+K + CGE+ R+ +L Y H S A+VEF
Sbjct: 76 QREIDRRSVYVGNIDYSATTADLKKVLDD-CGEINRITIL--YNHYTGRSKGFAYVEFND 132
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKTPV 354
E A AA+ +G L S + + +T +
Sbjct: 133 VEGAKAAIELNGTELYSRALTIQQKRTNI 161
>gi|345484300|ref|XP_003424998.1| PREDICTED: LOW QUALITY PROTEIN: poly(U)-binding-splicing factor
half pint-like [Nasonia vitripennis]
Length = 605
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
VYV I ++ E+ + FL G + + DP + FAFVE+ E A+ AL +
Sbjct: 124 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPATQKHKGFAFVEYEIPEAAQLALEQM 183
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G M+G ++V+ + + P + + +E + +R IY +I + +T+ DIK FE
Sbjct: 184 NGVMIGGRNIKVV-GRPSNMPQAQSVIDEITEESKHYNR-IYIASIHQDLTEEDIKSVFE 241
Query: 298 SVCGEVQRLRLL-GDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 353
+ G + +L G H + F+E+ +SA+ A+ LG +RV + TP
Sbjct: 242 AF-GPITYCKLAQGSSPHRHKGYGFIEYESMQSALEAIASMNLFDLGGQYLRVGRAITP 299
>gi|212531765|ref|XP_002146039.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
gi|210071403|gb|EEA25492.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
Length = 562
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 79/190 (41%), Gaps = 27/190 (14%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE +RTV+V + ++ ++L F G Q+V R+ G V +VEF D
Sbjct: 163 EDERDKRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKD 219
Query: 228 EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--------RTIY 279
E A+ L G L P+ IA + R E S +Y
Sbjct: 220 ESSVPLAIQLTGQKLLGIPI--------IAQLTEAEKNRQARNPEASSGQSASAPFHRLY 271
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSG 337
NI +T+ DI+ FE GE++ ++L D +R FV+F A AL +G
Sbjct: 272 VGNIHFSITENDIQNVFEPF-GELEFVQLQKDETGRSRGYGFVQFRDPNQAREALEKMNG 330
Query: 338 AVLGSLPIRV 347
L PIRV
Sbjct: 331 FDLAGRPIRV 340
>gi|156387980|ref|XP_001634480.1| predicted protein [Nematostella vectensis]
gi|156221563|gb|EDO42417.1| predicted protein [Nematostella vectensis]
Length = 380
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T+YV +D++V+E + LFL G VV+ + D + L + FVEF EE A A+ +
Sbjct: 14 TIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKV 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ ++ N+D +V D KL
Sbjct: 74 M-NMIKVYGKPIRV--NKAS-----------AHNKNLDVGANLFIGNLDTEV---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|62898205|dbj|BAD97042.1| splicing factor 3b, subunit 4 variant [Homo sapiens]
Length = 424
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-DMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|18398260|ref|NP_565399.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|20197280|gb|AAC64224.2| putative splicing factor [Arabidopsis thaliana]
gi|133778824|gb|ABO38752.1| At2g16940 [Arabidopsis thaliana]
gi|330251464|gb|AEC06558.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 561
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 82/184 (44%), Gaps = 19/184 (10%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL 235
+RTV+ I + TE + F G+V D RI D S +VEF D A+
Sbjct: 181 QRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMAI 240
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPT---------FLPRSEDEREMCSRTIYCTNIDKK 286
+L+G L PV V PS+ V T P S +R +Y N+
Sbjct: 241 ALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYS-----GGARRLYVGNLHIN 295
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLP 344
+++ D++ FES G V+ +++ D + FV+FA E A ALN +G + +
Sbjct: 296 MSEDDLRKVFESF-GSVELVQVPRDETGLCKGFGFVQFARLEDARNALNLNGQLEIAGRA 354
Query: 345 IRVS 348
I+VS
Sbjct: 355 IKVS 358
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVE 322
P ++ ER+ RT++ I + T+ D+ FF S G+V+ +R++ D + S I +VE
Sbjct: 173 PEADPERDQ--RTVFAYQIALRATERDVYEFF-SRAGKVRDVRIIMDRISRRSRGIGYVE 229
Query: 323 FAMAESAIAALNCSGAVLGSLPIRVSPSK 351
F S A+ SG L P+ V PS+
Sbjct: 230 FYDTMSVPMAIALSGQPLLGQPVMVKPSE 258
>gi|453089427|gb|EMF17467.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 501
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 19/193 (9%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSLA 238
+++ ++ V EE L F G++ RI D +S F +VEFT+ E A AL
Sbjct: 242 LFIGNLSWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEFTNAEDAAKALEAK 301
Query: 239 G-TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC-------SRTIYCTNIDKKVTQG 290
++L +RV S T N RS D ++ + TI+C N+ T+
Sbjct: 302 NESLLDNRNIRVDFS-TPRDKSNAGPQQRSNDRQQKFGDAPGEPTATIWCGNLSFDATED 360
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTRIAF--VEFAMAESAIAALNC-SGAVLGSLPIRV 347
++ +F + G V +RL D F VE E A AA N G +G P+R+
Sbjct: 361 VVREYF-AEHGNVNSIRLPTDRDTGAPKGFGYVEMGSVEEAQAAFNALQGQDVGGRPVRL 419
Query: 348 SPSKTPVRPRAPR 360
+ +PR PR
Sbjct: 420 DYA----QPRPPR 428
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGAR 232
E + ++YV ++D V+E L +F G V R+C D + L +A+V F D E +
Sbjct: 39 ENVTASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGK 98
Query: 233 AAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ L T + P R++ S+ R R+ S I+ N+ + D
Sbjct: 99 TAIEKLNYTAIKGRPCRIMWSQ------------RDPSMRKKGSGNIFIKNLHPDI---D 143
Query: 292 IKLFFE--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNC-SGAVLGSLPIRV 347
K +E SV G + ++ D ++ FV F E+A A++ +G +L + V
Sbjct: 144 NKTLYETFSVFGNILSCKIANDETGKSKGFGFVHFENEEAAREAIDAINGMLLNGQEVYV 203
Query: 348 SP 349
+P
Sbjct: 204 AP 205
>gi|194880963|ref|XP_001974622.1| GG21846 [Drosophila erecta]
gi|190657809|gb|EDV55022.1| GG21846 [Drosophila erecta]
Length = 635
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 25/187 (13%)
Query: 162 RRMNCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV 217
R R +Q+D +RR+ V++ ++D+ + + + F G ++ C++ D
Sbjct: 69 RNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGN 128
Query: 218 LR-FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
+ + FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 129 SKGYGFVHFETEEAANTSIDKVNGML-------LNGKKVYVG---KFIPRKEREKELGEK 178
Query: 277 T-----IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAE 327
+Y N + +K FFE G++ +++ ++ +AF AE
Sbjct: 179 AKLFTNVYVKNFTEDFDDEKLKEFFEP-YGKITSYKVMSKEDGKSKGFGFVAFETTEAAE 237
Query: 328 SAIAALN 334
+A+ ALN
Sbjct: 238 AAVQALN 244
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ Q V E L F T G V+ R+C D L +A+V F A AL +
Sbjct: 3 SLYVGDLPQDVNESGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDT 62
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ +L P+R++ S+ R R ++ N+D+ + I F
Sbjct: 63 MNFDLLRNKPIRIMWSQ------------RDPSLRRSGVGNVFIKNLDRAIDNKAIYDTF 110
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
S G + ++ D + +++ FV F E+A +++ +L
Sbjct: 111 -SAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGML 154
>gi|46122079|ref|XP_385593.1| hypothetical protein FG05417.1 [Gibberella zeae PH-1]
Length = 473
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS-VLRFAFVEFTDEEGA-R 232
E +R +Y+ +DQ+VTEE L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 78 EPNKRALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAER 137
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 291
A +L G + +R VN + + ++ + + I+ ++ +V
Sbjct: 138 AMQTLNGRRVHQSEIR----------VNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEV 187
Query: 292 IKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIR 346
+ F S G V R++ D + S FV F AE A+++++ G LGS IR
Sbjct: 188 LTQAF-SAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMD--GEWLGSRAIR 244
>gi|302500992|ref|XP_003012489.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
gi|291176047|gb|EFE31849.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
Length = 801
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 59 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 118
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 119 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 166
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D Y +S FV + AE+A A+ +L
Sbjct: 167 -AAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGML 210
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGARAAL 235
+YV +++Q VT+E+ LF G++ + D N + F FV F+D E A AA+
Sbjct: 241 IYVKNVEQDVTDEEFRGLFEKYGEITSATLSRD-NETGKSRGFGFVNFSDHEAASAAV 297
>gi|23346437|ref|NP_694693.1| splicing factor 3B subunit 4 [Mus musculus]
gi|58865472|ref|NP_001011951.1| splicing factor 3B subunit 4 [Rattus norvegicus]
gi|354472911|ref|XP_003498680.1| PREDICTED: splicing factor 3B subunit 4-like [Cricetulus griseus]
gi|81910895|sp|Q6AYL5.1|SF3B4_RAT RecName: Full=Splicing factor 3B subunit 4
gi|81914822|sp|Q8QZY9.1|SF3B4_MOUSE RecName: Full=Splicing factor 3B subunit 4
gi|20071686|gb|AAH26567.1| Splicing factor 3b, subunit 4 [Mus musculus]
gi|26338948|dbj|BAC33145.1| unnamed protein product [Mus musculus]
gi|37537250|gb|AAH24418.3| Splicing factor 3b, subunit 4 [Mus musculus]
gi|50925599|gb|AAH78997.1| Splicing factor 3b, subunit 4 [Rattus norvegicus]
gi|55391441|gb|AAH85273.1| Splicing factor 3b, subunit 4 [Mus musculus]
gi|74183317|dbj|BAE22576.1| unnamed protein product [Mus musculus]
gi|148706922|gb|EDL38869.1| splicing factor 3b, subunit 4 [Mus musculus]
gi|149030610|gb|EDL85647.1| rCG51900 [Rattus norvegicus]
gi|344238680|gb|EGV94783.1| Splicing factor 3B subunit 4 [Cricetulus griseus]
Length = 424
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|359475014|ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
Length = 609
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 21/186 (11%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL 235
+RTV+ I + E + F G+V D R+ D NS ++EF D A+
Sbjct: 218 QRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 277
Query: 236 SLAGTMLGFYPVRVLPSK--------TAIAPVNPTFL--PRSEDEREMCSRTIYCTNIDK 285
+L+G L PV V PS+ T A P L P S +R +Y N+
Sbjct: 278 ALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIGPYS-----GGARRLYVGNLHF 332
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAV-LGS 342
+T+ ++ FE G V+ ++L D + H FV+FA E A AA + +G + +
Sbjct: 333 NITEDQLRQVFEPF-GTVELVQLPTDLETGHCKGFGFVQFARLEDARAAQSLNGQLDIAG 391
Query: 343 LPIRVS 348
I+VS
Sbjct: 392 RTIKVS 397
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVE 322
P ++ ER+ RT++ I K + D+ FF S G+V+ +RL+ D + S + ++E
Sbjct: 210 PEADPERDQ--RTVFAYQICLKADERDVYEFF-SRAGKVRDVRLIMDRNSRRSKGVGYIE 266
Query: 323 FAMAESAIAALNCSGAVLGSLPIRVSPSK 351
F A S A+ SG L P+ V PS+
Sbjct: 267 FYDAMSVPMAIALSGQPLLGQPVMVKPSE 295
>gi|326478130|gb|EGE02140.1| polyadenylate-binding protein [Trichophyton equinum CBS 127.97]
Length = 782
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 59 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 118
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 119 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 166
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D Y +S FV + AE+A A+ +L
Sbjct: 167 -AAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGML 210
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGARAAL 235
+YV +++Q VT+E+ LF G++ + D N + F FV F+D E A AA+
Sbjct: 241 IYVKNVEQDVTDEEFRGLFEKYGEITSATLSRD-NETGKSRGFGFVNFSDHEAASAAV 297
>gi|325090859|gb|EGC44169.1| RNA splicing factor [Ajellomyces capsulatus H88]
Length = 585
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 14/184 (7%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ ++L F G Q+V R+ G V +VEF +
Sbjct: 184 EDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKN 240
Query: 228 EEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
EE A+ L G L P+ ++ ++ NP S ++ + +Y NI
Sbjct: 241 EESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE-ANVSGNQNSIPFHRLYVGNIHF 299
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSL 343
+T+ D++ FE GE+ ++L + +R FV+F A AL +G L
Sbjct: 300 SITESDLQKVFEPF-GELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGFDLAGR 358
Query: 344 PIRV 347
PIRV
Sbjct: 359 PIRV 362
>gi|66810518|ref|XP_638966.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
gi|60467589|gb|EAL65610.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
Length = 727
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 17/166 (10%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGA 231
+E +RTV+VS + Q + E+ L+ LF G V++ R+ D + +VEF+ +E
Sbjct: 261 EESDQRTVFVSKLSQNIVEKDLSDLFSQAGTVLNVRLITDKVTKRMKGVGYVEFSQKEMV 320
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
A++L+G++L + V +I P S SR IY I V +
Sbjct: 321 DKAIALSGSVLDGQQILV----HSIQPEKKVIKSNSTGSSGGESR-IYVGYIHLSVAEEQ 375
Query: 292 IKLFFESVCGEVQRLRLLGDYQHS----TRIAFVEFAMAESAIAAL 333
I++ F+ G++ + + H+ ++ AF++F ESA A+
Sbjct: 376 IRVIFQPY-GDIDFINI-----HTKPGISKYAFIQFKTQESAKRAI 415
>gi|302658195|ref|XP_003020804.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
gi|291184669|gb|EFE40186.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
Length = 816
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 75 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 134
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 135 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 182
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D Y +S FV + AE+A A+ +L
Sbjct: 183 -AAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGML 226
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGARAAL 235
+YV +++Q VT+E+ LF G++ + D N + F FV F+D E A AA+
Sbjct: 257 IYVKNVEQDVTDEEFRGLFEKYGEITSATLSRD-NETGKSRGFGFVNFSDHEAASAAV 313
>gi|410968226|ref|XP_004001545.1| PREDICTED: LOW QUALITY PROTEIN: splicing factor 3B subunit 4 [Felis
catus]
Length = 424
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|329663420|ref|NP_001192513.1| splicing factor 3B subunit 4 [Bos taurus]
gi|395856067|ref|XP_003800464.1| PREDICTED: splicing factor 3B subunit 4 [Otolemur garnettii]
gi|426216470|ref|XP_004002485.1| PREDICTED: splicing factor 3B subunit 4 [Ovis aries]
gi|281346199|gb|EFB21783.1| hypothetical protein PANDA_020653 [Ailuropoda melanoleuca]
gi|296489611|tpg|DAA31724.1| TPA: splicing factor 3b, subunit 4, 49kDa [Bos taurus]
Length = 424
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|75948207|gb|AAI05267.1| SF3B4 protein [Bos taurus]
Length = 418
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 8 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 67
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 68 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 110
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 111 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 168
Query: 348 S 348
S
Sbjct: 169 S 169
>gi|328871935|gb|EGG20305.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 567
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 22/180 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAAL-S 236
++YV D+ Q VT+ QL +F G V + RIC D + L +A+V + + A AL +
Sbjct: 9 SLYVGDLHQDVTDSQLFEIFNQVGPVANLRICRDTTTRRSLNYAYVNYHNPADAERALDT 68
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ R++ S+ R R+ I+ N+DK V D K F
Sbjct: 69 LNNTLVKGKACRIMWSQ------------RDPSLRKSGVGNIFIKNLDKSV---DHKALF 113
Query: 297 E--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA-IAALNCSGAVLGSLPIRVSPSKT 352
+ S G + +++ D + ++ FV + +SA A + +G ++ + V P K+
Sbjct: 114 DTFSAFGNILSCKVVTDETNVSKGFGFVHYESQDSADKAIMKVNGMIINDQKVFVGPFKS 173
>gi|410910988|ref|XP_003968972.1| PREDICTED: splicing factor 3B subunit 4-like [Takifugu rubripes]
Length = 397
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|209881749|ref|XP_002142312.1| polyadenylate-binding protein [Cryptosporidium muris RN66]
gi|209557918|gb|EEA07963.1| polyadenylate-binding protein, putative [Cryptosporidium muris
RN66]
Length = 723
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 76/179 (42%), Gaps = 24/179 (13%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAA 234
+ ++YV D+D VTE L +F + V RIC D L +A+V + A A
Sbjct: 10 VSASLYVGDLDPDVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERA 69
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L L F +R P + +P R ++ N+DK + D K
Sbjct: 70 LD----TLNFTCIRSRPCRIMWCLRDPA-------SRRNNEGNVFVKNLDKSI---DNKT 115
Query: 295 FFE--SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAES---AIAALNCSGAVLGSLPIRV 347
F+ S+ G + ++ D + +S F+ F ES AIA LN G +LG PI V
Sbjct: 116 LFDTFSLFGNIMSCKIATDSEGNSLGYGFIHFEHPESAKEAIARLN--GMILGDRPIYV 172
>gi|392579826|gb|EIW72953.1| hypothetical protein TREMEDRAFT_72942 [Tremella mesenterica DSM
1558]
Length = 475
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 8/173 (4%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSLA 238
VYV + V E LA+ F +CG+VV+ R+ D + F FV F E A A+++
Sbjct: 214 VYVGGLSWNVDNEWLASEFQSCGEVVEARVMFDHQNQKSKGFGFVRFKTAEEAAKAVAMT 273
Query: 239 GTMLGFYPVRV-LPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G + +R ++ PV + D+R + T+Y + + + + F
Sbjct: 274 GHEIDGRAIRCDFAAEKTDNPVE-RRAQKFNDQRSAPAATLYLGGLSYDLNEDAVYEAFG 332
Query: 298 SVCGEVQRLRLLGDYQHSTRIAF--VEFAMAESAIAALNC-SGAVLGSLPIRV 347
G++QR+ L D + F VEFA + A AAL +G L IRV
Sbjct: 333 DF-GDIQRVSLPTDRETGAPKGFGYVEFADVDQATAALEAMNGKELSGRRIRV 384
>gi|225561416|gb|EEH09696.1| RNA splicing factor Pad-1 [Ajellomyces capsulatus G186AR]
Length = 584
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 14/184 (7%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ ++L F G Q+V R+ G V +VEF +
Sbjct: 183 EDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKN 239
Query: 228 EEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
EE A+ L G L P+ ++ ++ NP S ++ + +Y NI
Sbjct: 240 EESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE-ANVSGNQNSIPFHRLYVGNIHF 298
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSL 343
+T+ D++ FE GE+ ++L + +R FV+F A AL +G L
Sbjct: 299 SITESDLQKVFEPF-GELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGFDLAGR 357
Query: 344 PIRV 347
PIRV
Sbjct: 358 PIRV 361
>gi|154282581|ref|XP_001542086.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
gi|150410266|gb|EDN05654.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
Length = 585
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 14/184 (7%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ ++L F G Q+V R+ G V +VEF +
Sbjct: 184 EDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKN 240
Query: 228 EEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
EE A+ L G L P+ ++ ++ NP S ++ + +Y NI
Sbjct: 241 EESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE-ANVSGNQNSIPFHRLYVGNIHF 299
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSL 343
+T+ D++ FE GE+ ++L + +R FV+F A AL +G L
Sbjct: 300 SITESDLQKVFEPF-GELDFVQLQKEEGGRSRGYGFVQFRDPNQAREALEKMNGFDLAGR 358
Query: 344 PIRV 347
PIRV
Sbjct: 359 PIRV 362
>gi|125549781|gb|EAY95603.1| hypothetical protein OsI_17455 [Oryza sativa Indica Group]
Length = 667
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 16/146 (10%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+T++V ++ V +EQ+ F G+VVD R + R F VEF E A+ AL L
Sbjct: 436 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL 495
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRS-------EDEREMCSRTIYCTNIDKKVTQG 290
AG L PVR+ +A + P S + + TI+ D +
Sbjct: 496 AGHDLMGRPVRL-----DLARERGAYTPGSGRDNSSFKKPAQSSGNTIFIKGFDTSLDIH 550
Query: 291 DIKLFFES---VCGEVQRLRLLGDYQ 313
I+ E CGE+ R+ + DY+
Sbjct: 551 QIRNSLEEHFGSCGEITRVSIPKDYE 576
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL----GDYQHSTRIAF 320
P S + S+T++ N+ V Q +K FF+ GEV +R G+++
Sbjct: 425 PASNQNQATGSKTLFVGNLPYNVEQEQVKQFFQE-AGEVVDIRFSTFEDGNFRG---FGH 480
Query: 321 VEFAMAESAIAALNCSGAVLGSLPIRV 347
VEFA AE+A AL +G L P+R+
Sbjct: 481 VEFATAEAAKKALELAGHDLMGRPVRL 507
>gi|315052346|ref|XP_003175547.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
gi|311340862|gb|EFR00065.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
Length = 782
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 59 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 118
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 119 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 166
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D Y +S FV + AE+A A+ +L
Sbjct: 167 -AAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGML 210
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGARAAL 235
+YV +++Q VT+E+ +LF G++ + D N + F FV F+D E A AA+
Sbjct: 241 IYVKNVEQDVTDEEFRSLFEKYGEITSATLSRD-NETGKSRGFGFVNFSDHEAASAAV 297
>gi|296804902|ref|XP_002843299.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
gi|238845901|gb|EEQ35563.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
Length = 1278
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 18/160 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
TV+V++ E + LF +CG++ + R N+ RF +V+FT A AA L
Sbjct: 877 TVFVTNFPPTADENYIRELFHSCGEIAEVRFPSLKYNTHRRFCYVQFTSSSDAYAATGLN 936
Query: 239 GTMLGFYPVRVL----PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
LG V+ PS+ + RS E R IY N+ K T+GD+
Sbjct: 937 EKDLGGNLRLVVKISDPSQRQV---------RSGAYEE--GREIYVCNLPYKTTEGDLVE 985
Query: 295 FFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
F + G+V+ +R+ TR AFV FA + + AAL
Sbjct: 986 LF-TAYGDVESVRIPTKVNGETRGFAFVTFATKDQSNAAL 1024
>gi|444515113|gb|ELV10775.1| Splicing factor 3B subunit 4 [Tupaia chinensis]
Length = 355
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|431896603|gb|ELK06015.1| Splicing factor 3B subunit 4 [Pteropus alecto]
Length = 424
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|348586343|ref|XP_003478928.1| PREDICTED: splicing factor 3B subunit 4-like [Cavia porcellus]
Length = 424
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|334305801|sp|Q9SVV9.2|AML3_ARATH RecName: Full=Protein MEI2-like 3; Short=AML3; AltName:
Full=MEI2-like protein 3
Length = 759
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDCRICGDPNSVLRFAFVEFTDEEGARAA 234
RT++V +I+ V + +L LF G + C+ G F V + D +RAA
Sbjct: 166 RTLFVRNINSNVEDSELQALFEQYGHIRTLYTACKQRG-------FVMVSYNDIRASRAA 218
Query: 235 L-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
+ +L G +L R L +I NP+ E+++ T+ N+ V+ D++
Sbjct: 219 MRALQGKLLK---KRKLDIHFSIPKDNPS-------EKDVNQGTLVVFNLAPSVSNRDLE 268
Query: 294 LFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN 334
F V GE++ +R + +H + F + A++A+ ALN
Sbjct: 269 NIF-GVYGEIKEIRETPNKRHHKFVEFFDVRSADAALKALN 308
>gi|322698722|gb|EFY90490.1| poly(A) RNA binding protein [Metarhizium acridum CQMa 102]
Length = 742
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 131 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 190
Query: 221 AFVEFTDEEGARAALSLAGTML----GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + +E A A+ ML Y +P K R EM +
Sbjct: 191 GFVHYETDEAAHQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 239
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
IY NI + + + + FE G++ L D + +R FV F ESA A+
Sbjct: 240 FTNIYVKNISTEASDDEFRELFEKY-GDITSSSLARDQEGKSRGFGFVNFTTHESAAKAV 298
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 75/173 (43%), Gaps = 18/173 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + + +G +A
Sbjct: 61 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALEE 120
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 121 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDVAIDNKALHDTF 168
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
+ G + ++ D +++ FV + E+A A+ + +G +L + V
Sbjct: 169 -AAFGNILSCKVAQDENGNSKGYGFVHYETDEAAHQAIKHVNGMLLNEKKVYV 220
>gi|412991277|emb|CCO16122.1| predicted protein [Bathycoccus prasinos]
Length = 620
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 22/177 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD-EEGARAALS 236
++YV D++ TE QL LF T G VV R+C D L +A+V F+ ++ ARA
Sbjct: 44 SLYVGDLESSATEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFSQAQDAARAIDV 103
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L ++ P+R+L S+ +PT R+ I+ N+DK + ++ F
Sbjct: 104 LNFQVVNGKPIRILYSQR-----DPTI-------RKSGVGNIFIKNLDKDIDTVALRDTF 151
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEF---AMAESAIAALNCSGAVLGSLPIRVSP 349
+ G + ++ D Q +++ F++F A A+ AI +N G L + V P
Sbjct: 152 -AQFGNIVSAKVATDGQGNSKGYGFIQFDTEAAAKEAIEKVN--GMELNDKVVYVGP 205
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSLA 238
+Y+ +++ +E L LF G + CR+ D + V R AFV F+ EE RA L
Sbjct: 326 LYIKNLEDGADDETLRELFKEFGTITSCRVMRDASGVSRGSAFVAFSSPEEATRAVTELN 385
Query: 239 GTMLGFYPVRV 249
G M+G P+ V
Sbjct: 386 GKMVGAKPLYV 396
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 10/177 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF-TDEEGARAALSLA 238
V+V ++ +VT+E+L +F G V I D + + F FV + T E+ ++A L
Sbjct: 222 VFVKNLGDEVTDEELRKVFEGFGPVTSVMISKDEDGKSKGFGFVCYETPEDASKAVEELD 281
Query: 239 GTM----LGFYPVRVLPSKTAIAPVNPTF-LPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
G + R A + F R E +M +Y N++ ++
Sbjct: 282 GKHGEEDKKWVVCRAQKKAEREAELKAKFEAERRERMEKMAGANLYIKNLEDGADDETLR 341
Query: 294 LFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 348
F+ G + R++ D +R AFV F+ E A A+ +G ++G+ P+ V+
Sbjct: 342 ELFKEF-GTITSCRVMRDASGVSRGSAFVAFSSPEEATRAVTELNGKMVGAKPLYVA 397
>gi|403415768|emb|CCM02468.1| predicted protein [Fibroporia radiculosa]
Length = 1020
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 155 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 214
N Y R RT + D R +YV+ + + VT++ L TLF T G V + R+ DP
Sbjct: 764 NVYISNPERKKERTDSDAND----REIYVAGLSRFVTKKDLETLFRTYGTVKEVRMALDP 819
Query: 215 NSVLR-FAFVEFTDEEGARAALS 236
N + FAF+EF E+ A AALS
Sbjct: 820 NGRPKGFAFIEFEQEQDASAALS 842
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 21/194 (10%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 236
R T+YV++ ++ + + LF G + D R S RF +++FT A AAL
Sbjct: 692 RSTLYVTNFPEKADDAFVRNLFTKYGTIFDVRWPSKKFKSTRRFCYIQFTSPTSAEAALE 751
Query: 237 LAGTML-GFYPVRVLPSKTAIAPVNPTFLPRSEDER---EMCSRTIYCTNIDKKVTQGDI 292
L L P+ V S P + ER + R IY + + VT+ D+
Sbjct: 752 LHKQELEDGLPLNVYISN-----------PERKKERTDSDANDREIYVAGLSRFVTKKDL 800
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
+ F + G V+ +R+ D + AF+EF + A AAL+ + L + I V+ +
Sbjct: 801 ETLFRT-YGTVKEVRMALDPNGRPKGFAFIEFEQEQDASAALSANNYELKNRRIAVTLAD 859
Query: 352 TPVRPRAP-RPPLH 364
T R RA R P H
Sbjct: 860 T--RNRAKNRDPNH 871
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 239
TV+V+D+ E+ L LF CG + + ++ PNS++ A VEF + + AAL+
Sbjct: 620 TVFVADLPPAAGEDDLTLLFKDCGSIREIKMTQLPNSLV--ATVEFMERDSVPAALTKDK 677
Query: 240 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGDIKLFFES 298
+G V V + R T+Y TN +K ++ F +
Sbjct: 678 KRIGGEEVAV----------------------HLAWRSTLYVTNFPEKADDAFVRNLF-T 714
Query: 299 VCGEVQRLRLLG-DYQHSTRIAFVEFAMAESAIAALNCSGAVL-GSLPIRV 347
G + +R ++ + R +++F SA AAL L LP+ V
Sbjct: 715 KYGTIFDVRWPSKKFKSTRRFCYIQFTSPTSAEAALELHKQELEDGLPLNV 765
>gi|444316030|ref|XP_004178672.1| hypothetical protein TBLA_0B03120 [Tetrapisispora blattae CBS 6284]
gi|387511712|emb|CCH59153.1| hypothetical protein TBLA_0B03120 [Tetrapisispora blattae CBS 6284]
Length = 439
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 155 NGYSQGKRRMNCRTSNAQQDEVIR--RTVYVSDIDQQV-TEEQLATLFLTCGQVVDCRIC 211
+GY + N + D I+ R + V +ID ++ TEE L T FL CG++ + RI
Sbjct: 179 HGYKLVAKLSNPAMKQERSDSAIKEKREILVRNIDNELATEEILKTYFLVCGEIQNIRII 238
Query: 212 GDPNSVLRFAFVEFTDEEGARAALSLAGTML--GFYPVRVLPSKTAIAPVNPTFLPRSED 269
N FAF+ F + E A A+ L + L G P+ + IA P +L R E
Sbjct: 239 SPNNKSNSFAFIIFLNAESAEKAIKLNNSYLKVGSNPISI-----TIAEQKP-YLERQEI 292
Query: 270 EREMCSR 276
+ + +R
Sbjct: 293 KSLLSAR 299
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 8/136 (5%)
Query: 215 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC 274
NS RF +V+ + A A+S F + K NP D
Sbjct: 150 NSKRRFCYVDVCSNKEALLAVS------RFNDKNIHGYKLVAKLSNPAMKQERSDSAIKE 203
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA-- 332
R I NID ++ +I + VCGE+Q +R++ S AF+ F AESA A
Sbjct: 204 KREILVRNIDNELATEEILKTYFLVCGEIQNIRIISPNNKSNSFAFIIFLNAESAEKAIK 263
Query: 333 LNCSGAVLGSLPIRVS 348
LN S +GS PI ++
Sbjct: 264 LNNSYLKVGSNPISIT 279
>gi|355558380|gb|EHH15160.1| hypothetical protein EGK_01215 [Macaca mulatta]
Length = 424
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI +
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNCPITI 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|334184263|ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
gi|330251466|gb|AEC06560.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
Length = 610
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 14/224 (6%)
Query: 133 NFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTE 192
I+ +GT+ + RKR+ K + + E +RTV+ I + TE
Sbjct: 190 KIIIVIEGTSRASCVYAYWRKRH-----KDKKEDKVEPEADPERDQRTVFAYQIALRATE 244
Query: 193 EQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVL 250
+ F G+V D RI D S +VEF D A++L+G L PV V
Sbjct: 245 RDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYDTMSVPMAIALSGQPLLGQPVMVK 304
Query: 251 PSKTAIAPVNPTFLPRSEDE----REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRL 306
PS+ V T +R +Y N+ +++ D++ FES G V+ +
Sbjct: 305 PSEAEKNLVQSTTAAAGAGGMLGPYSGGARRLYVGNLHINMSEDDLRKVFESF-GSVELV 363
Query: 307 RLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVS 348
++ D + FV+FA E A ALN +G + + I+VS
Sbjct: 364 QVPRDETGLCKGFGFVQFARLEDARNALNLNGQLEIAGRAIKVS 407
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVE 322
P ++ ER+ RT++ I + T+ D+ FF S G+V+ +R++ D + S I +VE
Sbjct: 222 PEADPERD--QRTVFAYQIALRATERDVYEFF-SRAGKVRDVRIIMDRISRRSRGIGYVE 278
Query: 323 FAMAESAIAALNCSGAVLGSLPIRVSPSK 351
F S A+ SG L P+ V PS+
Sbjct: 279 FYDTMSVPMAIALSGQPLLGQPVMVKPSE 307
>gi|327290521|ref|XP_003229971.1| PREDICTED: splicing factor 3B subunit 4-like [Anolis carolinensis]
Length = 417
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|225554943|gb|EEH03237.1| RNA-binding protein Prp24 [Ajellomyces capsulatus G186AR]
Length = 1309
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 82/190 (43%), Gaps = 19/190 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
TV V ++ VTE ++ F G+VVD R N+ RF +V+F A AA L
Sbjct: 860 TVIVENLPSGVTETRVRQFFRDYGEVVDIRFPSLKYNTHRRFCYVQFQTAIAAHAATELN 919
Query: 239 GT-------MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCTNIDKKVT 288
GT + G LP I+ P ER + R I+ +N+D K T
Sbjct: 920 GTQQEVVGDLAGSADSMKLPLVVKISD------PTKRQERTGPTEEGREIHVSNLDWKAT 973
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
+ D+ F + G+V+ R+ +++ FV F ESA A+L + + S P+ V
Sbjct: 974 EDDLVELF-AAYGQVEAARIPRKANGASKGFGFVVFQTKESAEASLAMNEQLFRSRPLHV 1032
Query: 348 SPSKTPVRPR 357
S V R
Sbjct: 1033 HISTPTVAKR 1042
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
R ++VS++D + TE+ L LF GQV RI N + F FV F +E A A+L++
Sbjct: 961 REIHVSNLDWKATEDDLVELFAAYGQVEAARIPRKANGASKGFGFVVFQTKESAEASLAM 1020
Query: 238 AGTMLGFYPVRVLPSKTAIA 257
+ P+ V S +A
Sbjct: 1021 NEQLFRSRPLHVHISTPTVA 1040
>gi|345782582|ref|XP_540295.3| PREDICTED: splicing factor 3B subunit 4 [Canis lupus familiaris]
Length = 424
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|195397963|ref|XP_002057597.1| GJ18017 [Drosophila virilis]
gi|194141251|gb|EDW57670.1| GJ18017 [Drosophila virilis]
Length = 599
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 13/177 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALS 236
RTV+ + Q+V L F + G+V D R+ C A++EF D E AL
Sbjct: 242 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALALG 301
Query: 237 LAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L+G L P+ V + K + P F P++ +Y ++ +T+ ++
Sbjct: 302 LSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKA----HTGPMRLYVGSLHFNITEDMLR 357
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
FE G++ ++L+ D + S F+ + A+ A AL +G L P++V
Sbjct: 358 GIFEPF-GKIDVIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFELAGRPMKV 413
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 17/115 (14%)
Query: 261 PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHSTRI 318
PT L S +ER+ +RT++C + ++V D++ FF SV G+V+ +RL+ + I
Sbjct: 231 PTEL--SPEERD--ARTVFCIQLSQRVRARDLEEFFSSV-GKVRDVRLITCNKTKRFKGI 285
Query: 319 AFVEFAMAESAIAALNCSGAVLGSLPI----------RVSPSKTPVRPRAPRPPL 363
A++EF ES AL SG L +PI R+ + P +P+A P+
Sbjct: 286 AYIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKAHTGPM 340
>gi|327299218|ref|XP_003234302.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
gi|326463196|gb|EGD88649.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
Length = 781
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 59 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 118
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 119 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 166
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D Y +S FV + AE+A A+ +L
Sbjct: 167 -AAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGML 210
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGARAAL 235
+YV +++Q VT+E+ LF G++ + D N + F FV F+D E A AA+
Sbjct: 241 IYVKNVEQDVTDEEFRGLFEKYGEITSATLSRD-NETGKSRGFGFVNFSDHEAASAAV 297
>gi|427792527|gb|JAA61715.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 497
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 269 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFAMA 326
+ER+M RT++C + +++ D++ FF +V G+V+ +RL+ D + S IA+VEF
Sbjct: 133 EERDM--RTVFCMQLSQRIRARDLEEFFSAV-GKVRDVRLIMDNKTRRSKGIAYVEFQDV 189
Query: 327 ESAIAALNCSGAVLGSLPIRVSPSK 351
ES A+ +G L +PI V P++
Sbjct: 190 ESVPLAMGLNGQKLFGIPIVVQPTQ 214
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 11/178 (6%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGARAAL 235
RTV+ + Q++ L F G+V D R+ D N R A+VEF D E A+
Sbjct: 138 RTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMD-NKTRRSKGIAYVEFQDVESVPLAM 196
Query: 236 SLAGTMLGFYPVRVLPSKTA---IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
L G L P+ V P++ A N + + + +Y ++ +T+ +
Sbjct: 197 GLNGQKLFGIPIVVQPTQAERNRAAAQNASTSNSTLQRGNVGPMRLYVGSLHFNITEEML 256
Query: 293 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
K FE G++ ++ L+ D + S F+ F +E A AL +G L P++V
Sbjct: 257 KGIFEPF-GKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFELAGRPMKV 313
>gi|342870153|gb|EGU73450.1| hypothetical protein FOXB_16088 [Fusarium oxysporum Fo5176]
Length = 474
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 21/180 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 232
E +R +Y+ +DQ+VTEE L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 80 EPNKRALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAER 139
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 291
A +L G + +R VN + + ++ + + I+ ++ +V +
Sbjct: 140 AMQTLNGRRVHQSEIR----------VNWAYQSNTTNKEDTSNHFHIFVGDLSNEVND-E 188
Query: 292 IKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIR 346
+ L S G V R++ D + S FV F AE A+++++ G LGS IR
Sbjct: 189 VLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMD--GEWLGSRAIR 246
>gi|270001539|gb|EEZ97986.1| hypothetical protein TcasGA2_TC000381 [Tribolium castaneum]
Length = 591
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 13/181 (7%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
VYV I ++ E+ + FL G + + DP + FAFVE+ E A+ AL +
Sbjct: 143 VYVGSISFELKEDTIRQSFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 202
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G M+G ++V+ + + P + ++E + +R IY +I +T+ DIK FE
Sbjct: 203 NGVMIGGRNIKVV-GRPSNMPQAQAVIDEIQEEAKQYNR-IYVASIHPDLTEDDIKSVFE 260
Query: 298 SVCGEVQRLRLL-GDYQHSTR-IAFVEFAMAES---AIAALNCSGAVLGSLPIRVSPSKT 352
+ G + +L G H + F+E+ A++ AIA++N LG +RV + T
Sbjct: 261 AF-GPIIYCKLAQGSSGHKHKGYGFIEYETAQAANEAIASMNLFD--LGGQYLRVGRAIT 317
Query: 353 P 353
P
Sbjct: 318 P 318
>gi|449454734|ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 404
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 98/232 (42%), Gaps = 38/232 (16%)
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATL 198
+GTA NG R N S G++R QD+ T++V D+ VT+ L
Sbjct: 128 NGTAMPNGAQNFRL--NWASAGEKR---------QDDSPDYTIFVGDLAGDVTDYVLQET 176
Query: 199 F------LTCGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLP 251
F + +VV R+ G + FV+F DE E RA + G P+R+ P
Sbjct: 177 FRARYNSVKGAKVVIDRLTGRTKG---YGFVKFGDESEQMRAMTEMNGVHCSSRPMRIGP 233
Query: 252 SKTAIAPVNPTFLPRS-------EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQ 304
+ F S ++E + + TI+ N+D VT ++ F GE+
Sbjct: 234 AANKNTSGGQQFSKTSYQNPQGAQNENDPNNTTIFVGNLDANVTDEHLRQVFGQY-GELV 292
Query: 305 RLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRVSPSKTP 353
+++ R FV+FA AE A+ LN G +G IR+S ++P
Sbjct: 293 HVKI----PVGKRCGFVQFADRNCAEEALRVLN--GTQIGGQNIRLSWGRSP 338
>gi|358342556|dbj|GAA49996.1| RNA-binding protein 39 [Clonorchis sinensis]
Length = 730
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGARAAL 235
RTV+V + ++ + L F + G++ D R+ D N R A+VEF + E A+ AL
Sbjct: 79 RTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMD-NKTKRSKGIAYVEFREVESAQLAL 137
Query: 236 SLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
L GT L P+++ S K + + P ++ M +Y ++ +T+ +
Sbjct: 138 GLTGTRLLGVPIQIQQSHAEKNRMNAIPSVPKPTQQNRGPM---KLYIGSLHYNITEEML 194
Query: 293 KLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRV 347
K FE G++ ++L+ D S FV +A ++ A AL+ +G L P++V
Sbjct: 195 KGIFEPF-GKIDDIKLIKDPATGRSQGYGFVTYANSDDAKKALDQLNGFELAGRPMKV 251
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 13/108 (12%)
Query: 261 PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRI 318
P P D +RT++ + ++ Q D++ FF SV G+++ +RL+ D + S I
Sbjct: 69 PELTPEERD-----ARTVFVWQLSARIRQRDLEDFFTSV-GKIRDVRLIMDNKTKRSKGI 122
Query: 319 AFVEFAMAESAIAALNCSGAVLGSLPIRVSPS-----KTPVRPRAPRP 361
A+VEF ESA AL +G L +PI++ S + P P+P
Sbjct: 123 AYVEFREVESAQLALGLTGTRLLGVPIQIQQSHAEKNRMNAIPSVPKP 170
>gi|350629665|gb|EHA18038.1| hypothetical protein ASPNIDRAFT_176547 [Aspergillus niger ATCC
1015]
Length = 496
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 231
E +R +YV +D +VTE+ L +F T G VV +I D N + FVEF D A
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFNSKGYNYGFVEFDDPGAA 146
Query: 232 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 289
RA +L G + +R VN + S ++ + + I+ ++ +V
Sbjct: 147 ERAMQTLNGRRIHQSEIR----------VNWAYQSNSTNKEDTSNHFHIFVGDLSNEVND 196
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 344
++ L S G V R++ D + +AF E + A+ A+++++ G LGS
Sbjct: 197 -EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMD--GEWLGSRA 253
Query: 345 IR 346
IR
Sbjct: 254 IR 255
>gi|325091867|gb|EGC45177.1| RNA-binding protein [Ajellomyces capsulatus H88]
Length = 1309
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 82/190 (43%), Gaps = 19/190 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
TV V ++ VTE ++ F G+VVD R N+ RF +V+F A AA L
Sbjct: 860 TVIVENLPSGVTETRVRQFFRDYGEVVDIRFPSLKYNTHRRFCYVQFQTAIAAHAATELN 919
Query: 239 GT-------MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCTNIDKKVT 288
GT + G LP I+ P ER + R I+ +N+D K T
Sbjct: 920 GTQQEVVGDLAGSAGSMKLPLVVKISD------PTKRQERTGPTEEGREIHVSNLDWKAT 973
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
+ D+ F + G+V+ R+ +++ FV F ESA A+L + + S P+ V
Sbjct: 974 EDDLVELF-AAYGQVEAARIPRKANGASKGFGFVVFQTKESAEASLAMNEQLFRSRPLHV 1032
Query: 348 SPSKTPVRPR 357
S V R
Sbjct: 1033 HISTPTVAKR 1042
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
R ++VS++D + TE+ L LF GQV RI N + F FV F +E A A+L++
Sbjct: 961 REIHVSNLDWKATEDDLVELFAAYGQVEAARIPRKANGASKGFGFVVFQTKESAEASLAM 1020
Query: 238 AGTMLGFYPVRVLPSKTAIA 257
+ P+ V S +A
Sbjct: 1021 NEQLFRSRPLHVHISTPTVA 1040
>gi|392869588|gb|EJB11873.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides immitis RS]
Length = 466
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 231
E +R +YV +D +VTE+ L +F T G V +I D N L + FVE+ D A
Sbjct: 88 EPNKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNFQSKGLNYGFVEYDDPGAA 147
Query: 232 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 289
RA +L G + +R VN + + ++ + + I+ ++ +V
Sbjct: 148 ERAMQTLNGRRVHQSEIR----------VNWAYQSNNANKEDTSNHFHIFVGDLSNEVND 197
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 344
++ L S G V R++ D + +AF E A AE A+++++ G LGS
Sbjct: 198 -EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMD--GEWLGSRA 254
Query: 345 IR 346
IR
Sbjct: 255 IR 256
>gi|227206268|dbj|BAH57189.1| AT4G18120 [Arabidopsis thaliana]
Length = 629
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDCRICGDPNSVLRFAFVEFTDEEGARAA 234
RT++V +I+ V + +L LF G + C+ G F V + D +RAA
Sbjct: 36 RTLFVRNINSNVEDSELQALFEQYGHIRTLYTACKQRG-------FVMVSYNDIRASRAA 88
Query: 235 L-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
+ +L G +L R L +I NP+ E+++ T+ N+ V+ D++
Sbjct: 89 MRALQGKLLK---KRKLDIHFSIPKDNPS-------EKDVNQGTLVVFNLAPSVSNRDLE 138
Query: 294 LFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN 334
F V GE++ +R + +H + F + A++A+ ALN
Sbjct: 139 NIF-GVYGEIKEIRETPNKRHHKFVEFFDVRSADAALKALN 178
>gi|449476847|ref|XP_002193793.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells 3
[Taeniopygia guttata]
Length = 928
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 39/202 (19%)
Query: 180 TVYVSDIDQQVTEEQ--LATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 236
TV+VS++ + E + L LF +CG+VV+ R + R + +V+F +EE AR AL+
Sbjct: 670 TVFVSNLSYTMAEPEAKLRELFGSCGEVVEIRAVFNNKGTFRGYCYVQFREEEAARQALA 729
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF- 295
L T + P+ V P NP F Y T ++K KLF
Sbjct: 730 LDRTAVEGRPMFVSP--CVDKNKNPDF-----------KVFRYSTTLEKH------KLFI 770
Query: 296 -----------FESVC---GEVQRLRLLGDYQHSTR-IAFVEF-AMAESAIAALNCSGAV 339
E VC G V+ +RL+ + + +A+VE+ + A+++ A L G
Sbjct: 771 SGLPFSCTKEELEEVCKAHGNVKDIRLVTNRAGKPKGLAYVEYESEAQASQAVLKMDGLT 830
Query: 340 LGSLPIRVSPSKTPVRPRAPRP 361
+ I+V S P+R RP
Sbjct: 831 MKDHVIKVMISNPPLRKLPDRP 852
>gi|325089595|gb|EGC42905.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces capsulatus H88]
Length = 492
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 19/179 (10%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 233
E +R +Y+ +D +VTE+ L +F T G V +I D NS L + FVE+ D A
Sbjct: 88 EPNKRALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAER 147
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGDI 292
A+S T+ G RV S+ VN + + ++ + + I+ ++ +V ++
Sbjct: 148 AMS---TLNG---RRVHQSEIR---VNWAYQSNNNNKEDTSNHFHIFVGDLSNEVND-EV 197
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 346
L S G V R++ D + +AF E AE A+++++ G LGS IR
Sbjct: 198 LLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMD--GEWLGSRAIR 254
>gi|119497981|ref|XP_001265748.1| pre-mRNA splicing factor (Prp24), putative [Neosartorya fischeri NRRL
181]
gi|119413912|gb|EAW23851.1| pre-mRNA splicing factor (Prp24), putative [Neosartorya fischeri NRRL
181]
Length = 1281
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 76/172 (44%), Gaps = 14/172 (8%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
T++V++ E + LF G++VD R N+ RF +V+F A A +L
Sbjct: 889 TLFVTNFPSTADESYIRNLFREYGEIVDIRFPSLKYNTHRRFCYVQFKSSGDAHNATTLN 948
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC--SRTIYCTNIDKKVTQGDIKLFF 296
GT +G + +PT R ED R I+ +NID K +GD+K F
Sbjct: 949 GTRVGS------DLNLVVKISDPT---RREDRHGPVYEGREIHISNIDWKANEGDLKEVF 999
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
+ G ++ +R+ ++ ++ F+ E A AAL S P++V
Sbjct: 1000 QKY-GTIETVRIPRKVDGGSKGFGYIVFSTKEEAEAALAMHEQEFRSRPLQV 1050
>gi|115390925|ref|XP_001212967.1| polyadenylate-binding protein [Aspergillus terreus NIH2624]
gi|121739603|sp|Q0CR95.1|PABP_ASPTN RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|114193891|gb|EAU35591.1| polyadenylate-binding protein [Aspergillus terreus NIH2624]
Length = 753
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 119 CRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGY 178
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 278
FV + E A A+ ML L K + + R EM + +
Sbjct: 179 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNV 231
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 334
Y N+D+++++ + + FE GE+ L D + +R FV ++ +SA AA++
Sbjct: 232 YIKNLDQEISEEEFRQMFEKF-GEITSATLSRDQEGKSRGFGFVNYSTHDSAQAAVD 287
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 49 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 108
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 109 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDAAIDNKALHDTF 156
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 157 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGML 200
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 19/111 (17%)
Query: 131 TNNFIMHTDGTANTN-----GHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSD 185
NN I H +G + GH +++ R + M +N VY+ +
Sbjct: 189 ANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFE---EMKANFTN----------VYIKN 235
Query: 186 IDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL 235
+DQ+++EE+ +F G++ + D R F FV ++ + A+AA+
Sbjct: 236 LDQEISEEEFRQMFEKFGEITSATLSRDQEGKSRGFGFVNYSTHDSAQAAV 286
>gi|195574479|ref|XP_002105216.1| GD21365 [Drosophila simulans]
gi|194201143|gb|EDX14719.1| GD21365 [Drosophila simulans]
Length = 363
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 237
++V D+ ++ +QL F G++ DCR+ DP ++ + FV F + A A++ +
Sbjct: 99 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 158
Query: 238 AGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT--- 288
G LG + R P+ A P ++ + T+YC I+ ++
Sbjct: 159 NGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 218
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 333
+I S G +Q +R+ D + AFV F+ E+A A+
Sbjct: 219 NEEILQKTFSPYGTIQEIRVFKDKGY----AFVRFSTKEAATHAI 259
>gi|427794973|gb|JAA62938.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 509
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 269 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFAMA 326
+ER+M RT++C + +++ D++ FF +V G+V+ +RL+ D + S IA+VEF
Sbjct: 145 EERDM--RTVFCMQLSQRIRARDLEEFFSAV-GKVRDVRLIMDNKTRRSKGIAYVEFQDV 201
Query: 327 ESAIAALNCSGAVLGSLPIRVSPSK 351
ES A+ +G L +PI V P++
Sbjct: 202 ESVPLAMGLNGQKLFGIPIVVQPTQ 226
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 11/178 (6%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGARAAL 235
RTV+ + Q++ L F G+V D R+ D N R A+VEF D E A+
Sbjct: 150 RTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMD-NKTRRSKGIAYVEFQDVESVPLAM 208
Query: 236 SLAGTMLGFYPVRVLPSKTA---IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
L G L P+ V P++ A N + + + +Y ++ +T+ +
Sbjct: 209 GLNGQKLFGIPIVVQPTQAERNRAAAQNASTSNSTLQRGNVGPMRLYVGSLHFNITEEML 268
Query: 293 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
K FE G++ ++ L+ D + S F+ F +E A AL +G L P++V
Sbjct: 269 KGIFEPF-GKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFELAGRPMKV 325
>gi|399217186|emb|CCF73873.1| unnamed protein product [Babesia microti strain RI]
Length = 145
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV------VDCRICGDPNSVLRF 220
RT++ QD+V RR+VYV +++ T + L F +CGQ+ VD + G P +
Sbjct: 29 RTNDTSQDDVDRRSVYVGNVEYSATPQNLQEYFKSCGQINRITIMVD-KWTGHPKG---Y 84
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
A++EF EE AL L T+ ++V + I
Sbjct: 85 AYIEFAQEESVENALLLNETLFKERLIKVTSKRKNI 120
>gi|297799290|ref|XP_002867529.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
gi|297313365|gb|EFH43788.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
Length = 418
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 24/196 (12%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLF------LTCGQVVDCRICGDPNSVLRFAFVEF 225
+Q E TV+V D+ VT+ L F + +VV R G + FV F
Sbjct: 167 RQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVTDRTTGRSKG---YGFVRF 223
Query: 226 TDE-EGARAALSLAGTMLGFYPVRVLPSKT----AIAPVNPTFLPRSEDEREMCSRTIYC 280
DE E RA + G P+R P+ + P + ++ E + + TI+
Sbjct: 224 GDESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNQGESDPTNTTIFV 283
Query: 281 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF---AMAESAIAALNCSG 337
+D+ V + D+K F GE+ +++ R FV++ A AE A++ LN G
Sbjct: 284 GALDQSVIEDDLKSVFGQF-GELVHVKIPA----GKRCGFVQYANRACAEQALSLLN--G 336
Query: 338 AVLGSLPIRVSPSKTP 353
LG IR+S ++P
Sbjct: 337 TQLGGQSIRLSWGRSP 352
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 147 HTTTRRKRNGYSQGKRRMNCRTSNAQ-------QDEVIRRTVYVSDIDQQVTEEQLATLF 199
+ ++R R G + K+ + + ++ Q + + T++V +DQ V E+ L ++F
Sbjct: 240 YCSSRPMRTGPAANKKPLTMQPASYQNTQGNQGESDPTNTTIFVGALDQSVIEDDLKSVF 299
Query: 200 LTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA-GTMLGFYPVRV 249
G++V +I R FV++ + A ALSL GT LG +R+
Sbjct: 300 GQFGELVHVKIPAG----KRCGFVQYANRACAEQALSLLNGTQLGGQSIRL 346
>gi|47834689|gb|AAT38998.1| AML1 [Medicago truncatula]
Length = 856
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDCRICGDPNSVLRFAFVEFTDEEGARAA 234
RT++V +I+ V + +L TLF G + C+ G F + + D AR A
Sbjct: 198 RTLFVRNINSNVEDSELRTLFEQYGDIRTLYTACKHRG-------FVMISYYDIRAARTA 250
Query: 235 LSLAGTMLGFYPVR--VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
+ L P+R L +I NP+ E+++ T+ N+D V+ D+
Sbjct: 251 M----RALQNKPLRRRKLDIHFSIPKDNPS-------EKDINQGTLVVFNLDPSVSNDDL 299
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
+ F GEV+ +R +H I F + A++A+ ALN S + I++ PS+
Sbjct: 300 RQIF-GAYGEVKEIRETPHKRHHKFIEFYDVRAADAALKALNRSD--IAGKRIKLEPSR 355
>gi|355718837|gb|AES06403.1| splicing factor 3b, subunit 4, 49kDa [Mustela putorius furo]
Length = 406
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 12 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 71
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 72 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 114
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 115 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 172
Query: 348 S 348
S
Sbjct: 173 S 173
>gi|115398692|ref|XP_001214935.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191818|gb|EAU33518.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1291
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 16/176 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
T++V++ E+ + LF G+++D R N+ RF +V+F E A+ A L
Sbjct: 901 TLFVTNFPPTADEKYIRDLFHEFGEIIDIRFPSLKYNTHRRFCYVQFKTGEAAQNATKLD 960
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE---MCSRTIYCTNIDKKVTQGDIKLF 295
GT++G + V P + +R R I+ +N+D K + D+K
Sbjct: 961 GTVVG----------NNLHLVAKISDPSRKQDRHGPMYEGREIHVSNVDWKANEDDLKEL 1010
Query: 296 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPS 350
F S G V+ +R+ ++ +V F+ E A AAL S P+ V S
Sbjct: 1011 F-SKYGHVELVRIPRKVDGGSKGFGYVVFSTKEEAQAALALHEHEFRSRPLHVKVS 1065
>gi|357138034|ref|XP_003570603.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 216
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAM 325
+E + ++ +R++Y N+D T +++ F++ CG V R+ +L D + A+VEF
Sbjct: 81 AEAKEQVDARSVYVGNVDYACTPEEVQQHFQA-CGTVNRVTILTDKFGQPKGFAYVEFLE 139
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 362
E+ ALN + + L I+VSP +T V RPP
Sbjct: 140 QEAVQEALNLNESELHGRQIKVSPKRTNVPGMKQRPP 176
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 223
N T+ A+ ++V R+VYV ++D T E++ F CG V I D + FA+V
Sbjct: 77 NASTAEAK-EQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYV 135
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
EF ++E + AL+L + L ++V P +T +
Sbjct: 136 EFLEQEAVQEALNLNESELHGRQIKVSPKRTNV 168
>gi|338762832|gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]
Length = 368
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 31/168 (18%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
T YV ++D QV+EE L LF+ G VV+ + D NS + FVEF EE A A+ +
Sbjct: 26 TAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNSHQGYGFVEFRSEEDADYAIKV 85
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y P+RV + S+D++ + ++ N+D V D KL
Sbjct: 86 L-NMIKLYGKPIRVNKA--------------SQDKKSVDVGANLFIGNLDPDV---DEKL 127
Query: 295 FFESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN 334
+++ ++ R G+ + I++ F +++AI A+N
Sbjct: 128 LYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAAIEAMN 175
>gi|357138032|ref|XP_003570602.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 210
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAM 325
+E + ++ +R++Y N+D T +++ F++ CG V R+ +L D + A+VEF
Sbjct: 75 AEAKEQVDARSVYVGNVDYACTPEEVQQHFQA-CGTVNRVTILTDKFGQPKGFAYVEFLE 133
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 362
E+ ALN + + L I+VSP +T V RPP
Sbjct: 134 QEAVQEALNLNESELHGRQIKVSPKRTNVPGMKQRPP 170
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 223
N T+ A++ +V R+VYV ++D T E++ F CG V I D + FA+V
Sbjct: 71 NASTAEAKE-QVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYV 129
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
EF ++E + AL+L + L ++V P +T +
Sbjct: 130 EFLEQEAVQEALNLNESELHGRQIKVSPKRTNV 162
>gi|449282485|gb|EMC89318.1| Polyadenylate-binding protein 2, partial [Columba livia]
Length = 178
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEE 229
EV +R+VYV ++D T E+L + F +CGQV + C + G P +A++EF ++
Sbjct: 42 EVDQRSVYVGNVDYGSTAEELESHFHSCGQVNRVTILCDKFSGHPKG---YAYIEFEEKS 98
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
+AA+ L ++ ++VLP +T + ++ T
Sbjct: 99 SVKAAVELDESVFRGRVIKVLPKRTNMPGISST 131
>gi|217075899|gb|ACJ86309.1| unknown [Medicago truncatula]
Length = 379
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDCRICGDPNSVLRFAFVEFTDEEGARAA 234
RT++V +I+ V + +L TLF G + C+ G F + + D AR A
Sbjct: 198 RTLFVRNINSNVEDSELRTLFEQYGDIRTLYTACKHRG-------FVMISYYDIRAARTA 250
Query: 235 LSLAGTMLGFYPVR--VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
+ L P+R L +I NP+ E+++ T+ N+D V+ D+
Sbjct: 251 MR----ALQNKPLRRRKLDIHFSIPKDNPS-------EKDINQGTLVVFNLDPSVSNDDL 299
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
+ F GEV+ +R +H I F + A++A+ ALN S + I++ PS+
Sbjct: 300 RQIF-GAYGEVKEIRETPHKRHHKFIEFYDVRAADAALKALNRSD--IAGKRIKLEPSR 355
>gi|195123564|ref|XP_002006275.1| GI18654 [Drosophila mojavensis]
gi|193911343|gb|EDW10210.1| GI18654 [Drosophila mojavensis]
Length = 645
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 25/183 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +RR+ V++ ++D+ + + + F G ++ C++ D + +
Sbjct: 73 IRIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATDEKGTSKGY 132
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 133 GFVHFETEEAANTSIDKVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLF 182
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIA 331
+Y N + +K FFE G++ +++ ++ +A+ AE+A+
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQ 241
Query: 332 ALN 334
ALN
Sbjct: 242 ALN 244
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
++YV D+ Q + E L F + G V+ R+C D L +A+V F A AL
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD- 61
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
+ F +R P + + +P+ R ++ N+DK + I F
Sbjct: 62 ---TMNFDLIRDKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDKAIDNKAIYDTF- 110
Query: 298 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
S G + ++ D + +++ FV F E+A +++ +L
Sbjct: 111 SAFGNILSCKVATDEKGTSKGYGFVHFETEEAANTSIDKVNGML 154
>gi|119174082|ref|XP_001239402.1| hypothetical protein CIMG_09023 [Coccidioides immitis RS]
Length = 485
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 231
E +R +YV +D +VTE+ L +F T G V +I D N L + FVE+ D A
Sbjct: 88 EPNKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNFQSKGLNYGFVEYDDPGAA 147
Query: 232 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 289
RA +L G + +R VN + + ++ + + I+ ++ +V
Sbjct: 148 ERAMQTLNGRRVHQSEIR----------VNWAYQSNNANKEDTSNHFHIFVGDLSNEVND 197
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 344
++ L S G V R++ D + +AF E A AE A+++++ G LGS
Sbjct: 198 -EVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMD--GEWLGSRA 254
Query: 345 IR 346
IR
Sbjct: 255 IR 256
>gi|327357360|gb|EGE86217.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces dermatitidis ATCC 18188]
Length = 492
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 232
E +R +Y+ +D +VTE+ L +F T G V +I D NS L + FVE+ D A R
Sbjct: 88 EPNKRALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAER 147
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 291
A +L G + +R VN + + ++ + + I+ ++ +V +
Sbjct: 148 AMATLNGRRVHQSEIR----------VNWAYQSNNSNKEDTSNHFHIFVGDLSNEVND-E 196
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 346
+ L S G V R++ D + +AF E AE A+++++ G LGS IR
Sbjct: 197 VLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMD--GEWLGSRAIR 254
>gi|452984370|gb|EME84127.1| hypothetical protein MYCFIDRAFT_202901 [Pseudocercospora fijiensis
CIRAD86]
Length = 715
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 20/179 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 126 CRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAVDEHGNSKGY 185
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + + A A+ S+ G +L V V +P K ++ +E +
Sbjct: 186 GFVHYETSDAANQAIKSVNGMLLNEKKVFVGHHIPKKDRMSKF---------EEMKANFT 236
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 334
IY NID + T + + FE G++ L D Q R FV F E A A++
Sbjct: 237 NIYVKNIDAETTDDEFRELFEKY-GQITSASLAHDDQGKVRGFGFVNFIRHEDAAKAVD 294
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSAADGERALEE 115
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDAAIDNKALHDTF 163
Query: 297 ESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ + + ++ +S FV + +++A A+ +L
Sbjct: 164 AAFGNILSCKVAVDEHGNSKGYGFVHYETSDAANQAIKSVNGML 207
>gi|308475439|ref|XP_003099938.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
gi|308266205|gb|EFP10158.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
Length = 408
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 13/176 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL- 235
RT++V ++D +T+E LATLF G V +I D L FAFVEF+D A AL
Sbjct: 38 RTLFVGNLDPAITDEFLATLFNQIGAVTKAKIIFDCFQGLNDPFAFVEFSDHNQASQALQ 97
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
S+ G L +RV A+ P P + E R ++ ++ ++ ++
Sbjct: 98 SMNGRQLLEREMRV---NWAVEPNQPGDRNKPETSRHFH---VFVGDLSAEIDSTKLREA 151
Query: 296 FESVCGEVQRLRLLGD--YQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 348
F GEV +++ D + FV + E A A+ +G LG IR +
Sbjct: 152 FLPF-GEVSEAKIIRDNATNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTN 206
>gi|195471585|ref|XP_002088083.1| GE14328 [Drosophila yakuba]
gi|194174184|gb|EDW87795.1| GE14328 [Drosophila yakuba]
Length = 590
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 12/162 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALS 236
RTV+ + Q+V L F + G+V D R+ C A++EF D E AL
Sbjct: 233 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALALG 292
Query: 237 LAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L+G L P+ V + K + P F P+S +Y ++ +T+ ++
Sbjct: 293 LSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKS----HTGPMRLYVGSLHFNITEDMLR 348
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL 333
FE G++ ++L+ D + S F+ + A+ A AL
Sbjct: 349 GIFEPF-GKIDAIQLIMDTETGRSKGYGFITYHNADDAKKAL 389
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 261 PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHSTRI 318
PT L S +ER+ +RT++C + ++V D++ FF SV G+V+ +RL+ + I
Sbjct: 222 PTEL--SPEERD--ARTVFCIQLSQRVRARDLEEFFSSV-GKVRDVRLITCNKTKRFKGI 276
Query: 319 AFVEFAMAESAIAALNCSGAVLGSLPIRV 347
A++EF ES AL SG L +PI V
Sbjct: 277 AYIEFEDPESVALALGLSGQRLLGVPIMV 305
>gi|443895761|dbj|GAC73106.1| polyadenylate-binding protein [Pseudozyma antarctica T-34]
Length = 556
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 19/182 (10%)
Query: 162 RRMNCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV 217
R CR +Q+D +RRT +++ ++D + + L F G ++ C++ +
Sbjct: 113 RNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKVATSESGS 172
Query: 218 LRFAFVEFTDEEGARAALSLAGTML----GFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 273
L + FV + E A AA+ ML Y +P K A + E+ R
Sbjct: 173 LGYGFVHYETAEAADAAIKHVNGMLLNDKKVYVGHHIPRKERQAKI--------EESRAR 224
Query: 274 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAA 332
+ +YC N+D VT + + F + G++ L D ++ FV F + A A
Sbjct: 225 FT-NVYCKNVDADVTDEEFEKLF-TKYGKITSCVLQRDEDGKSKGFGFVNFENHDEAQTA 282
Query: 333 LN 334
++
Sbjct: 283 VD 284
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 17/172 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L +F G V R+C D L +A+V F + +G RA
Sbjct: 47 SLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQ 106
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L +++ P R++ S+ R R I+ N+D + + F
Sbjct: 107 LNYSLIRNRPCRIMWSQ------------RDPALRRTGQGNIFIKNLDAGIDNKALHDTF 154
Query: 297 ESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
+ G + ++ S FV + AE+A AA+ + +G +L + V
Sbjct: 155 -AAFGNILSCKVATSESGSLGYGFVHYETAEAADAAIKHVNGMLLNDKKVYV 205
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSLA 238
V+V + V + L + F +CG+VV R+ D +S F +VEF D E + A+
Sbjct: 196 VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLEASAKAIEKD 255
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSE---DEREMCSRTIYCTNIDKKVTQGDIKLF 295
G+ + +RV T P N R++ D++ + T++ ++ VT+ +
Sbjct: 256 GSEIDGRAIRVN-YATQRKP-NEAAEKRAKVFNDKQSPPAETLWIGSLSFSVTEDQVYEA 313
Query: 296 FESVCGEVQRLRLLGDYQHSTRIAF--VEFAMAESAIAALNC-SGAVLGSLPIRV 347
F G+VQ +RL D F V+F+ E A AAL +GA + IRV
Sbjct: 314 F-GQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDASAALKAMNGAEIAGRAIRV 367
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Query: 259 VNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHST 316
V P R++D E + ++ + V +K FES CGEV R++ D Q S
Sbjct: 177 VAPAKKARADDGEEEATTNVFVGQLSWNVDNDWLKSEFES-CGEVVSARVVFDRDSQKSR 235
Query: 317 RIAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
+VEFA E++ A+ G+ + IRV
Sbjct: 236 GFGYVEFADLEASAKAIEKDGSEIDGRAIRV 266
>gi|396492663|ref|XP_003843853.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
gi|312220433|emb|CBY00374.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
Length = 747
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 17/176 (9%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF- 225
+ AQQ ++YV ++D VTE L LF + GQV R+C D L +A+V +
Sbjct: 37 TTAQQAHQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYN 96
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
+ E+G +A L T++ P R++ S+ R R+ ++ N+D
Sbjct: 97 SSEDGEKALEELNYTVIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDH 144
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ + F + G + ++ D + +S FV + AE+A A+ +L
Sbjct: 145 AIDNKALHDTF-AAFGNILSCKVAQDEHGNSKGYGFVHYETAEAANNAIKHVNGML 199
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 78/180 (43%), Gaps = 20/180 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 118 CRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDEHGNSKGY 177
Query: 221 AFVEFTDEEGARAALS-LAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + E A A+ + G +L V V +P K ++ +E +
Sbjct: 178 GFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKF---------EEMKANFT 228
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNC 335
IY NID VT + + FE G++ + D Q +R FV + E+A A+
Sbjct: 229 NIYVKNIDLDVTDDEFRDLFEK-HGDITSASIARDDQGKSRGFGFVNYIKHEAASVAVET 287
>gi|297851358|ref|XP_002893560.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339402|gb|EFH69819.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 799
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 27/179 (15%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDCRICGDPNSVLRFAFVEFTDEEGARAA 234
RT++V +I+ V + +L LF G + C+ G F + + D AR A
Sbjct: 168 RTLFVRNINSNVEDSELTALFEQYGDIRTLYTTCKHRG-------FVMISYYDIRSARMA 220
Query: 235 L-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
+ SL L R L +I NP+ E++M T+ N+D ++ D+
Sbjct: 221 MRSLQNKPLR---RRKLDIHFSIPKDNPS-------EKDMNQGTLVVFNLDPSISNDDLH 270
Query: 294 LFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVSPSK 351
F V GE++ +R +H + F + AE+A+ ALN C + I+V PS+
Sbjct: 271 GIF-GVHGEIKEIRETPHKRHHKFVEFYDVRGAEAALKALNRCE---IAGKRIKVEPSR 325
>gi|357124786|ref|XP_003564078.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 209
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAM 325
SE + EM SR+++ N+D T +++ F S CG V R+ +L D + A+VEF
Sbjct: 73 SEAKEEMDSRSVFVGNVDYACTPEEVQQHFNS-CGTVNRVTILTDKFGQPKGFAYVEFVE 131
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKTPV----RPRAPR 360
AE+ A+ S + L I+V+P +T V +PR R
Sbjct: 132 AEAIQEAVKLSESELHGRQIKVAPKRTNVPGLKQPRGGR 170
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 223
N TS A++ E+ R+V+V ++D T E++ F +CG V I D + FA+V
Sbjct: 69 NATTSEAKE-EMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYV 127
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
EF + E + A+ L+ + L ++V P +T +
Sbjct: 128 EFVEAEAIQEAVKLSESELHGRQIKVAPKRTNV 160
>gi|328715702|ref|XP_003245699.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2
[Acyrthosiphon pisum]
gi|328715706|ref|XP_003245700.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 3
[Acyrthosiphon pisum]
Length = 420
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 14/162 (8%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
++V D+ ++ + L F G++ DCR+ DP ++ + FV F + A +A+ ++
Sbjct: 64 IFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKAEAESAIAAM 123
Query: 238 AGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
G LG + R P+ + P ++ + T+YC + +T
Sbjct: 124 NGQWLGSRSIRTNWATRKPPTLKTDSNTKPLTFDEVYNQSSPTNCTVYCGGLTSGLTDEL 183
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 333
++ F G +Q +R+ D + AFV FA ESA A+
Sbjct: 184 VQKTFAPF-GNIQEIRVFKDKGY----AFVRFATKESATHAI 220
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 13/193 (6%)
Query: 163 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR--ICGDPNSVLRF 220
R N +E RTV+V + Q++ L F + G+V D R +C
Sbjct: 148 RSNSPVEELSPEERDARTVFVMQLSQRIRARDLEEFFSSVGKVRDVRLIVCNKTRRFKGI 207
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRT 277
A++EF D E AL L+G L P+ V + K + P +P++
Sbjct: 208 AYIEFKDPESVTLALGLSGQKLLGVPIIVQHTQAEKNRMGNSMPNLMPKN----MTGPMR 263
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-N 334
+Y ++ +T+ ++ FE G++ ++L+ D + S F+ F E A AL
Sbjct: 264 LYVGSLHFNITEDMLRSIFEPF-GKIDNIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQ 322
Query: 335 CSGAVLGSLPIRV 347
+G L P++V
Sbjct: 323 LNGFELAGRPMKV 335
>gi|366987097|ref|XP_003673315.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
gi|342299178|emb|CCC66926.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
Length = 575
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 24/181 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALSL 237
++YV ++D V+E L +F G V R+C D + L +A+V F D E + A+
Sbjct: 36 SLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAVTKTSLGYAYVNFNDHEAGKKAIE- 94
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L + P++ + + +P R+ S I+ N+ + D K FE
Sbjct: 95 ---QLNYTPIKGRLCRIMWSQRDPAL-------RKKGSGNIFIKNLHPDI---DNKALFE 141
Query: 298 --SVCGEVQRLRLLGDYQHSTR-IAFVEF---AMAESAIAALNCSGAVLGSLPIRVSPSK 351
SV G + ++ D ++ FV F + A+ AI ALN G +L I V+P
Sbjct: 142 TFSVFGNILSSKIATDETGKSKGFGFVHFEHESSAKEAIDALN--GMLLNGQEIYVAPHL 199
Query: 352 T 352
T
Sbjct: 200 T 200
>gi|356514396|ref|XP_003525892.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 630
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 78/176 (44%), Gaps = 20/176 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
++YV D+D V + QL LF QVV RIC D L + +V F++ A A+ +
Sbjct: 25 SLYVGDLDHDVNDPQLYDLFNQVAQVVSVRICRDVATQQSLGYGYVNFSNARDAAKAIDV 84
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L F P L KT + + R R+ + ++ N+DK + D K F+
Sbjct: 85 ----LNFTP---LNGKT----IRIMYSIRDPSARKSGAANVFIKNLDKAI---DHKALFD 130
Query: 298 --SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVSP 349
S G + ++ D S FV+F ESA A++ +G ++ + V P
Sbjct: 131 TFSAFGNILSCKIATDASGQSKGHGFVQFESEESAQNAIDKLNGMLINDKQVYVGP 186
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 159 QGKRRMNCRTSNAQQ-----DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD 213
+ +R + + N Q D+ +Y+ ++D V +E+L LF G + C++ D
Sbjct: 281 KSERELELKERNEQSTKETVDKYHGTNLYIKNLDDSVGDEELRELFSEFGTITSCKVMRD 340
Query: 214 PNSVLRFA-FVEFTDEEGARAAL-SLAGTMLGFYPVRV 249
P+ + R + FV F+ EGA AL + G M+ P+ V
Sbjct: 341 PSGISRGSGFVAFSIAEGASWALGEMNGKMVAGKPLYV 378
>gi|242013287|ref|XP_002427343.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212511696|gb|EEB14605.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 371
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 24/199 (12%)
Query: 159 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS-- 216
QGK + + SN+ + V+ + +T+ L +F + G++ C++ + S
Sbjct: 5 QGKNVIMEQVSNSANTPTDHNNLIVNYLPDTMTQTDLQKMFESFGEIESCKLIMNKVSGH 64
Query: 217 VLRFAFVEFTDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS 275
+ + FV+F + + A+ ALS L G +L ++V ++ A P+ +
Sbjct: 65 SMGYGFVKFKNHKDAQNALSNLDGLLLQHKKIKVSFARPANEPIK--------------T 110
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL---GDYQHSTRIAFVEFAM---AESA 329
+Y + + +T+ D+ F S G+V ++++ GD + + I FV F AE+A
Sbjct: 111 ANVYVSGLKNTITEADLINMF-SKYGKVLTVKVMNNNGDGRKAMAIGFVRFEKHQCAENA 169
Query: 330 IAALNCSGAVLGSLPIRVS 348
I L+ + + PI VS
Sbjct: 170 IQNLDQTKPLENPTPIHVS 188
>gi|194862772|ref|XP_001970115.1| GG10454 [Drosophila erecta]
gi|190661982|gb|EDV59174.1| GG10454 [Drosophila erecta]
Length = 593
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 12/162 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALS 236
RTV+ + Q+V L F + G+V D R+ C A++EF D E AL
Sbjct: 236 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALALG 295
Query: 237 LAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L+G L P+ V + K + P F P+S +Y ++ +T+ ++
Sbjct: 296 LSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKS----HTGPMRLYVGSLHFNITEDMLR 351
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL 333
FE G++ ++L+ D + S F+ + A+ A AL
Sbjct: 352 GIFEPF-GKIDAIQLIMDTETGRSKGYGFITYHNADDAKKAL 392
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 261 PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHSTRI 318
PT L S +ER+ +RT++C + ++V D++ FF SV G+V+ +RL+ + I
Sbjct: 225 PTEL--SPEERD--ARTVFCIQLSQRVRARDLEEFFSSV-GKVRDVRLITCNKTKRFKGI 279
Query: 319 AFVEFAMAESAIAALNCSGAVLGSLPIRV 347
A++EF ES AL SG L +PI V
Sbjct: 280 AYIEFEDPESVALALGLSGQRLLGVPIMV 308
>gi|224094981|ref|XP_002310314.1| predicted protein [Populus trichocarpa]
gi|222853217|gb|EEE90764.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL 235
+RTV+V + + TE + F G+V D R+ D NS +VEF D A+
Sbjct: 20 QRTVFVYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAI 79
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM----CSRTIYCTNIDKKVTQGD 291
+L+G +L PV V PS+ V P+ R +Y N+ +T+
Sbjct: 80 TLSGQLLLGQPVMVKPSEAEKNLVQPSASGGGTGGVTGPFGAVDRKLYVGNLHFNMTEMQ 139
Query: 292 IKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAA 332
++ FE G V+ ++L D + FV+F E+A AA
Sbjct: 140 LRQLFEPF-GIVELVQLPLDLETGQCKGFGFVQFTQLENAKAA 181
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVE 322
P ++ ER+ RT++ + K T+ D+ FF S G+V+ +RL+ D + S + +VE
Sbjct: 12 PEADPERD--QRTVFVYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYVE 68
Query: 323 FAMAESAIAALNCSGAVLGSLPIRVSPS---KTPVRPRA 358
F A S A+ SG +L P+ V PS K V+P A
Sbjct: 69 FYDAMSVPMAITLSGQLLLGQPVMVKPSEAEKNLVQPSA 107
>gi|354545437|emb|CCE42165.1| hypothetical protein CPAR2_807140 [Candida parapsilosis]
Length = 420
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 25/183 (13%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 233
E + +YV ++ + +EEQ++ LF + ++ D N + +AF+EF D + A
Sbjct: 50 ETSNKILYVGNLPKSASEEQISELFSVSKPIKSIKLLNDKNKLGFNYAFIEFDDNQEADM 109
Query: 234 ALS-LAGTMLGFYPVRVLPS------KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 286
ALS L G +L +RV + ++ P +PT+ ++ ++ +
Sbjct: 110 ALSTLNGKLLNNCEIRVNWAYQSATIASSSTPEDPTY-------------NLFVGDLSSE 156
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTR--IAFVEFAMAESAIAALNC-SGAVLGSL 343
V +K F + ++ D Q S FV F+ E A AL +GA LG
Sbjct: 157 VNDEALKKAFNKF-DSFKEAHVMWDMQTSRSRGYGFVTFSKQEDAELALQTMNGAWLGGR 215
Query: 344 PIR 346
IR
Sbjct: 216 AIR 218
>gi|330938161|ref|XP_003305701.1| hypothetical protein PTT_18612 [Pyrenophora teres f. teres 0-1]
gi|311317207|gb|EFQ86241.1| hypothetical protein PTT_18612 [Pyrenophora teres f. teres 0-1]
Length = 749
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 20/180 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 119 CRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGY 178
Query: 221 AFVEFTDEEGARAALS-LAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + E A A+ + G +L V V +P K ++ +E +
Sbjct: 179 GFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKF---------EEMKANFT 229
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNC 335
IY NID V+ D + FE G++ + D Q +R FV + E+A AA++
Sbjct: 230 NIYVKNIDLDVSDDDFRDLFEK-HGDITSASIARDDQGKSRGFGFVNYIKHEAASAAVDA 288
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + E+G +A
Sbjct: 49 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEE 108
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 109 LNYTVIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDHAIDNKALHDTF 156
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D +S FV + AE+A A+ +L
Sbjct: 157 -AAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGML 200
>gi|395829049|ref|XP_003787673.1| PREDICTED: polyadenylate-binding protein 1-like [Otolemur
garnettii]
Length = 611
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 25/180 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA 221
R +Q+D +R++ +++ +++ + + L F T G ++ C++ D + F
Sbjct: 82 IRIMWSQRDPGLRKSGVGNIFIKNLEASIDNKALYDTFSTFGNILSCKVACDEHGSRGFG 141
Query: 222 FVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYC 280
FV F E A+ A+ ++ G +L + V V F R E E E+ +R +
Sbjct: 142 FVHFETHEAAQHAINTMNGMLLNDHKVFV-----------GHFKSRREREVELGARAMEF 190
Query: 281 TNIDKKVTQGDI------KLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL 333
TNI K Q D+ +LF S G++ ++++ D HS FV F E A A+
Sbjct: 191 TNIYVKNLQADVDEQGLQELF--SQFGKMLSVKVMRDSSGHSRGFGFVNFETHEEAQKAV 248
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 20/166 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAAL-S 236
++YV D+ VTE L F G ++ R+C D + L +A++ F A AL +
Sbjct: 12 SLYVGDLHADVTEALLYEKFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ M+ P+R++ S+ R R+ I+ N++ + D K +
Sbjct: 72 MNFEMIKGQPIRIMWSQ------------RDPGLRKSGVGNIFIKNLEASI---DNKALY 116
Query: 297 E--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ S G + ++ D S FV F E+A A+N +L
Sbjct: 117 DTFSTFGNILSCKVACDEHGSRGFGFVHFETHEAAQHAINTMNGML 162
>gi|346465875|gb|AEO32782.1| hypothetical protein [Amblyomma maculatum]
Length = 558
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 269 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFAMA 326
+ER+M RT++C + +++ D++ FF +V G+V+ +RL+ D + S IA+VEF
Sbjct: 192 EERDM--RTVFCMQLSQRIRARDLEEFFSAV-GKVRDVRLIMDNKTRRSKGIAYVEFLDV 248
Query: 327 ESAIAALNCSGAVLGSLPIRVSPSK 351
ES A+ +G L +PI V P++
Sbjct: 249 ESVPLAMGLNGQKLFGIPIVVQPTQ 273
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 11/178 (6%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGARAAL 235
RTV+ + Q++ L F G+V D R+ D N R A+VEF D E A+
Sbjct: 197 RTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMD-NKTRRSKGIAYVEFLDVESVPLAM 255
Query: 236 SLAGTMLGFYPVRVLPSKTA---IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
L G L P+ V P++ A N + + + +Y ++ +T+ +
Sbjct: 256 GLNGQKLFGIPIVVQPTQAERNRAAAQNASTSSSTLQRGNVGPMRLYVGSLHFNITEDML 315
Query: 293 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
K FE G++ ++ L+ D + S F+ F +E A AL +G L P++V
Sbjct: 316 KGIFEPF-GKIDKIELIKDMETNRSKGYGFITFHDSEDAKKALEQLNGFELAGRPMKV 372
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAAL-S 236
++YV D+D VT+ QL F QVV R+C D N+ L + +V +++ + A A+
Sbjct: 47 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQK 106
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L + L +R+ T+ R R ++ N+DK V + F
Sbjct: 107 LNYSYLNGKMIRI------------TYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAF 154
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
S CG + ++ D+ +R FV+F +SA A+ +G VL I V P
Sbjct: 155 -SGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGP 208
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFT-DEEGARAALSLA 238
+YV ++D VT+E+L LF G + C++ DP+ + + FV F+ E +R +
Sbjct: 330 LYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMN 389
Query: 239 GTMLGFYPVRV 249
G M+G P+ V
Sbjct: 390 GKMVGGKPLYV 400
>gi|240256156|ref|NP_195137.5| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
gi|1171978|sp|P42731.1|PABP2_ARATH RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2
gi|304109|gb|AAA61780.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|2911051|emb|CAA17561.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|7270360|emb|CAB80128.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|26983870|gb|AAN86187.1| putative polyadenylate-binding protein 2 (PABP2) [Arabidopsis
thaliana]
gi|332660925|gb|AEE86325.1| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
Length = 629
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 73/174 (41%), Gaps = 16/174 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD-EEGARAALS 236
++YV D+D VT+ QL F G VV R+C D L + +V FT+ ++ ARA
Sbjct: 37 SLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQE 96
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L L P+RV+ S R R + I+ N+D+ + + F
Sbjct: 97 LNYIPLYGKPIRVMYSH------------RDPSVRRSGAGNIFIKNLDESIDHKALHDTF 144
Query: 297 ESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
S V + S FV++A ESA A+ +G +L + V P
Sbjct: 145 SSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGP 198
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 12/136 (8%)
Query: 126 NGFGYTN--NFIMHTDGTANTNGHTTTRRKRN-GYSQGK--RRMNCRTSNAQQ-----DE 175
GFG+ N N + NGH ++ G +Q K R R Q D+
Sbjct: 255 KGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADK 314
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARA 233
+YV ++D +++E+L +F G V ++ DPN + + FV F T EE A
Sbjct: 315 FQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEA 374
Query: 234 ALSLAGTMLGFYPVRV 249
L+G M+ P+ V
Sbjct: 375 MSQLSGKMIESKPLYV 390
>gi|255718749|ref|XP_002555655.1| KLTH0G14344p [Lachancea thermotolerans]
gi|238937039|emb|CAR25218.1| KLTH0G14344p [Lachancea thermotolerans CBS 6340]
Length = 587
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALSLA 238
+YV ++D VTE L LF G V R+C D + L +A+V F D R A+
Sbjct: 42 LYVGELDPSVTEALLYDLFSPIGSVSSIRVCRDAITKTSLGYAYVNFHDHNAGRTAIE-- 99
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
L + P++ P + + +P+ R+ S ++ N+ + + F S
Sbjct: 100 --KLNYTPIKGRPCRIMWSQRDPSL-------RKKGSGNVFIKNLHPAIDNKALHDTF-S 149
Query: 299 VCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNC-SGAVLGSLPIRVSP 349
V G + ++ D +R FV F E+A A++ +G +L L + V+P
Sbjct: 150 VFGNILSCKIATDETGKSRKFGFVHFEEEEAAKEAIDAINGMLLNGLEVYVAP 202
>gi|407927556|gb|EKG20446.1| hypothetical protein MPH_02256 [Macrophomina phaseolina MS6]
Length = 485
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 24/183 (13%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV----LRFAFVEFTDEEG 230
E +R +YV +D ++TE+ L +F T G VV +I D N L + FVE+ D
Sbjct: 83 EPNKRALYVGGLDPRITEDVLRQIFETAGHVVSVKIIPDKNKFQSKGLNYGFVEYDDPGT 142
Query: 231 A-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVT 288
A RA +L G + +R VN + ++ + + + I+ ++ +V
Sbjct: 143 AERAMQTLNGRRVHQSEIR----------VNWAYQSNNQPKEDTSNHFHIFVGDLSNEVN 192
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSL 343
++ L S G+V R++ D + S FV F AE A+++++ G LGS
Sbjct: 193 D-EVLLQAFSAFGQVSEARVMWDMKTGRSRGYGFVAFRDRGDAEKALSSMD--GEWLGSR 249
Query: 344 PIR 346
IR
Sbjct: 250 AIR 252
>gi|10334491|emb|CAC10207.1| putative splicing factor [Cicer arietinum]
Length = 392
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 11/181 (6%)
Query: 162 RRMNCRTSNAQQD---EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL 218
RR + N + + E +RTV+ + + TE + F G+V D R+ D NS
Sbjct: 6 RRFRDKKDNVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 65
Query: 219 R--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE---DEREM 273
++EF D A++L+G +L PV V PS+ V +
Sbjct: 66 SKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNATSGAAGVTGPYGA 125
Query: 274 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIA 331
R +Y N+ +T+ +++ FE G+++ ++L D + H FV+FA E A A
Sbjct: 126 VDRKLYVGNLHFNMTEANLREIFEPF-GQIEVVQLPLDMETGHCKGFGFVQFAHLEHAKA 184
Query: 332 A 332
+
Sbjct: 185 S 185
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVE 322
P ++ ER+ RT++ + K T+ D+ FF S G+V+ +RL+ D + S + ++E
Sbjct: 17 PEADPERD--QRTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIE 73
Query: 323 FAMAESAIAALNCSGAVLGSLPIRVSPSK 351
F A S A+ SG +L P+ V PS+
Sbjct: 74 FYDAMSVPMAIALSGQLLLGQPVMVKPSE 102
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 18/175 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAAL-S 236
++YV D+D VT+ QL F QVV R+C D N+ L + +V +++ + A A+
Sbjct: 47 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQK 106
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L + L +R+ T+ R R ++ N+DK V + F
Sbjct: 107 LNYSYLNGKMIRI------------TYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAF 154
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
S CG + ++ D+ +R FV+F +SA A+ +G VL I V P
Sbjct: 155 -SGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGP 208
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFT-DEEGARAALSLA 238
+YV ++D VT+E+L LF G + C++ DP+ + + FV F+ E +R +
Sbjct: 330 LYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMN 389
Query: 239 GTMLGFYPVRV 249
G M+G P+ V
Sbjct: 390 GKMVGGKPLYV 400
>gi|358370208|dbj|GAA86820.1| RNA splicing factor (Pad-1) [Aspergillus kawachii IFO 4308]
Length = 571
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 15/194 (7%)
Query: 163 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSV 217
R RT +DE RRT++V + ++ ++L F G Q+V R+ G V
Sbjct: 165 RSRERTPEPTEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV 224
Query: 218 LRFAFVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCS 275
+VEF E+ A+ L G L P+ ++ ++ NP S +
Sbjct: 225 ---GYVEFKSEDAVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE--ASSGNNHAAPF 279
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL- 333
+Y NI +T+ D++ FE GE++ ++L D +R FV+F A AL
Sbjct: 280 HRLYVGNIHFSITESDLQNVFEPF-GELEFVQLQKDETGRSRGYGFVQFRDPNQAREALE 338
Query: 334 NCSGAVLGSLPIRV 347
+G L IRV
Sbjct: 339 KMNGFDLAGRAIRV 352
>gi|378732360|gb|EHY58819.1| nucleolin, variant [Exophiala dermatitidis NIH/UT8656]
gi|378732361|gb|EHY58820.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 1283
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
T+YV++ E + L G++++ R N RF +VEF + A+AA L
Sbjct: 916 TLYVTNYPAAADETWIRNLLRPYGEIINIRFPSLQRNKRRRFCYVEFKLPKEAQAATELD 975
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
G + + V S A PR+E + + RT++ + K T DI+ F S
Sbjct: 976 GKEIEGLNIVVKISNPAAR------QPRAEKKND--GRTVFVGQLPFKATTEDIEKSF-S 1026
Query: 299 VCGEVQRLRLLGDYQHSTR---IAFVEFAMAESAIAALNCSG 337
G++ +RL D ++ +R IAF+ FA E A AAL G
Sbjct: 1027 RYGKLDHIRLPHDPKNKSRNRGIAFITFARQEEAEAALAMDG 1068
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 74/183 (40%), Gaps = 28/183 (15%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 239
+V V ++ +TE ++ F +CG V + ++ D SV+ VEF D + A ALS G
Sbjct: 844 SVLVQNLPSNITETKIRQYFSSCGIVKNLKLLPDEKSVV----VEFEDADAATYALSRDG 899
Query: 240 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 299
L + V+ +N T+Y TN + I+
Sbjct: 900 RELEGSVISVV--------LN-------------TGSTLYVTNYPAAADETWIRNLLRPY 938
Query: 300 CGEVQRLRLLGDYQHS-TRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVR-PR 357
GE+ +R ++ R +VEF + + A AA G + L I V S R PR
Sbjct: 939 -GEIINIRFPSLQRNKRRRFCYVEFKLPKEAQAATELDGKEIEGLNIVVKISNPAARQPR 997
Query: 358 APR 360
A +
Sbjct: 998 AEK 1000
>gi|115461723|ref|NP_001054461.1| Os05g0114500 [Oryza sativa Japonica Group]
gi|45680441|gb|AAS75242.1| hypothetical protein [Oryza sativa Japonica Group]
gi|52353509|gb|AAU44075.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa Japonica Group]
gi|113578012|dbj|BAF16375.1| Os05g0114500 [Oryza sativa Japonica Group]
gi|222629967|gb|EEE62099.1| hypothetical protein OsJ_16883 [Oryza sativa Japonica Group]
Length = 548
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 12/181 (6%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEFTDE 228
+++ E + VYV I +E+ + + F CG + VDC + A + F +
Sbjct: 166 SEESEKNAKKVYVGGIPYYSSEDDIRSFFEACGSITSVDCMTFPESGKFRGIAILTFKTD 225
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
A+ AL+L G +G + +++ P K+ + F P+ + +Y N+ +T
Sbjct: 226 AAAQRALALDGADMGGFFLKIQPYKSVREKED--FAPKMIEGYNR----VYVGNLAWDIT 279
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF--VEFAMAESAIAALNCSGAVLGSLPIR 346
+ D+K FF S C ++ +R D + + V+F+ S A+ V+ P+R
Sbjct: 280 EDDLKKFF-SDC-KISSIRFGTDKETGDFKGYVHVDFSEGTSVAVAMKLDQKVIKGRPVR 337
Query: 347 V 347
+
Sbjct: 338 I 338
>gi|408392881|gb|EKJ72170.1| hypothetical protein FPSE_07657 [Fusarium pseudograminearum CS3096]
Length = 484
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 85/183 (46%), Gaps = 16/183 (8%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS-VLRFAFVEFTDEEGA-R 232
E +R +Y+ +DQ+VTEE L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 78 EPNKRALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAER 137
Query: 233 AALSLAGTMLG---FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVT 288
A +L G + YP SK VN + + ++ + + I+ ++ +V
Sbjct: 138 AMQTLNGRRVHQSVPYPDTTRNSKEIR--VNWAYQSNTTNKEDTSNHFHIFVGDLSNEVN 195
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSL 343
+ F S G V R++ D + S FV F AE A+++++ G LGS
Sbjct: 196 DEVLTQAF-SAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMD--GEWLGSR 252
Query: 344 PIR 346
IR
Sbjct: 253 AIR 255
>gi|255554923|ref|XP_002518499.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542344|gb|EEF43886.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 430
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 110/268 (41%), Gaps = 43/268 (16%)
Query: 113 GQIFNFNPAFFGPNGFGYTNNFIMHT-DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNA 171
GQ+ + FG +G T I+ T +GT NG R +S G +R
Sbjct: 127 GQVEGYGFIEFGSHG---TAERILQTYNGTPMPNGEQNFRLNWASFSGGDKR-------- 175
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLF------LTCGQVVDCRICGDPNSVLRFAFVEF 225
D+ T++V D+ VT+ L F + +VV R+ G + FV F
Sbjct: 176 --DDTPDFTIFVGDLAADVTDYILQDTFRVHYPSVKGAKVVIDRLTGRTKG---YGFVRF 230
Query: 226 TDE-EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS--------EDEREMCSR 276
DE E RA + G P+R+ + A + S E+E + +
Sbjct: 231 GDESEQVRAMTDMNGAFCSTRPMRIGLATNKNAVTGQQYPKASYQNSQTQGENENDPNNT 290
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAAL 333
TI+ N+D VT +++ F G++ +++ R FV+FA AE A+ L
Sbjct: 291 TIFVGNLDSNVTDDNLRELFGRY-GQLLHVKIPA----GKRCGFVQFADRSCAEEALRLL 345
Query: 334 NCSGAVLGSLPIRVSPSKTPVRPRAPRP 361
N G L IR+S ++P + P+P
Sbjct: 346 N--GTSLSGQSIRLSWGRSPSN-KQPQP 370
>gi|449489905|ref|XP_002191033.2| PREDICTED: splicing factor 3B subunit 4 [Taeniopygia guttata]
Length = 307
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|351706751|gb|EHB09670.1| Polyadenylate-binding protein 4-like protein [Heterocephalus
glaber]
Length = 370
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 87/194 (44%), Gaps = 39/194 (20%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ + TE+ L F G V+ RIC D L +A+V F A+ AL +
Sbjct: 11 SLYVGDLHAEATEDLLFRKFSAAGPVLSIRICRDLATRQPLGYAYVNFLQLADAQRALDT 70
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-----TIYCTNIDKKVTQGD 291
+ ++ P+R++ S +R+ C R ++ N+D+ V D
Sbjct: 71 MNFDVIKGRPIRLMWS-----------------QRDACLRRSGIGNVFVKNLDRSV---D 110
Query: 292 IKLFFE--SVCGEVQRLRLLGDYQHSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIR 346
K +E S G++ +++ D Q S AFV F + A AI +N G V+ P+
Sbjct: 111 NKTLYEHFSGFGKILSSKVMSDDQGSKGYAFVHFQSQSAANCAIEQMN--GKVINDRPVF 168
Query: 347 VSPSKTPVRPRAPR 360
V+P K PR R
Sbjct: 169 VAPFK----PRKDR 178
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 16/122 (13%)
Query: 167 RTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAF 222
R +Q+D +RR+ V+V ++D+ V + L F G+++ ++ D +AF
Sbjct: 82 RLMWSQRDACLRRSGIGNVFVKNLDRSVDNKTLYEHFSGFGKILSSKVMSDDQGSKGYAF 141
Query: 223 VEFTDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCT 281
V F + A A+ + G ++ PV V P F PR + E E+ SR T
Sbjct: 142 VHFQSQSAANCAIEQMNGKVINDRPVFVAP-----------FKPRKDREAELRSRASEFT 190
Query: 282 NI 283
N+
Sbjct: 191 NV 192
>gi|238492991|ref|XP_002377732.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus flavus
NRRL3357]
gi|220696226|gb|EED52568.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus flavus
NRRL3357]
Length = 1290
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
T++V++ + E + LF G+++D R N+ RF +V+F E A +A L
Sbjct: 907 TLFVTNFPPEADENYIRGLFREYGEIIDVRFPSLKYNTHRRFCYVQFKTAEAAHSATKLD 966
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC--SRTIYCTNIDKKVTQGDIKLFF 296
GT +G + L I+ +P+ R +D R I+ +N+D K ++ D++ F
Sbjct: 967 GTTVG----KGLTLTAKIS--DPS---RKQDRHGPIYEGREIHVSNVDFKASERDVQELF 1017
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGS--LPIRVSPSKTP 353
S G V+ +RL ++ +V F+ E A AAL G S L +++S ++
Sbjct: 1018 -SKYGTVELVRLPRKVDGGSKGFGYVVFSNKEEATAALAMDGQEYRSRTLHVKISAPQST 1076
Query: 354 VR 355
R
Sbjct: 1077 KR 1078
>gi|301792821|ref|XP_002931377.1| PREDICTED: polyadenylate-binding protein 2-like [Ailuropoda
melanoleuca]
Length = 178
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 226
++ E R++YV ++D T E+L F CG V + C + G P FA++EF+
Sbjct: 37 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 93
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
D+E R +L+L ++ ++V+P +T
Sbjct: 94 DKESVRTSLALDESLFRGRQIKVIPKRT 121
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 36 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 94
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 95 KESVRTSLALDESLFRGRQIKVIPKRT 121
>gi|417409281|gb|JAA51155.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 278
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 154 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 210
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 211 SLALDESLFRGRQIKVIPKRT 231
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 146 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 204
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 205 KESVRTSLALDESLFRGRQIKVIPKRT 231
>gi|317156878|ref|XP_001826075.2| pre-mRNA splicing factor (Prp24) [Aspergillus oryzae RIB40]
Length = 1289
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
T++V++ + E + LF G+++D R N+ RF +V+F E A +A L
Sbjct: 906 TLFVTNFPPEADENYIRGLFREYGEIIDVRFPSLKYNTHRRFCYVQFKTAEAAHSATKLD 965
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE---MCSRTIYCTNIDKKVTQGDIKLF 295
GT +G T A ++ P + +R R I+ +N+D K ++ D++
Sbjct: 966 GTTVG-------KGLTLTAKISD---PSRKQDRHGPIYEGREIHVSNVDFKASERDVQEL 1015
Query: 296 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
F S G V+ +RL ++ +V F+ E A AAL G S + V
Sbjct: 1016 F-SKYGTVELVRLPRKVDGGSKGFGYVVFSNKEEATAALAMDGQEYRSRTLHV 1067
>gi|224085260|ref|XP_002307526.1| predicted protein [Populus trichocarpa]
gi|222856975|gb|EEE94522.1| predicted protein [Populus trichocarpa]
Length = 649
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALSL 237
++YV D++ V E QL LF QVV R+C D + L +A+V F++ + A A+ L
Sbjct: 34 SLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFSNPQDASNAMEL 93
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L F P+ + ++ +P+ R+ ++ N+D + ++ F
Sbjct: 94 ----LNFTPLNGKAIRIMVSHRDPSM-------RKSGHANVFIKNLDTSIDNKALQETFA 142
Query: 298 SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN 334
S G V ++ D S FV+F E+A +A+N
Sbjct: 143 SF-GSVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAIN 179
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 76/182 (41%), Gaps = 30/182 (16%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D +R++ V++ ++D + + L F + G V+ C++ D N + +
Sbjct: 104 IRIMVSHRDPSMRKSGHANVFIKNLDTSIDNKALQETFASFGSVLSCKVAVDNNGQSKGY 163
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVN--PTFLPRSEDEREMCSRT- 277
FV+F +EE A++A++ ML +N F+ R +E T
Sbjct: 164 GFVQFENEEAAQSAINRLNGML----------------INDKEVFVGRFVRHQERIEATG 207
Query: 278 ------IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 331
+Y N+ + + D+K FF + + + S FV F +SA A
Sbjct: 208 SPKFTNVYVKNLSETTSDEDLKKFFSNYGAITSAIVMKDQSGKSKGFGFVNFQSPDSAAA 267
Query: 332 AL 333
A+
Sbjct: 268 AV 269
>gi|356537017|ref|XP_003537028.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 502
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 9/176 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLA 238
+Y+ ++D +TE L F + G+++ I D N + + FAFV + + + AR A+ ++
Sbjct: 193 LYIKNLDSDITEALLQEKFSSFGKIISLVISKDDNGLSKGFAFVNYENPDDARKAMEAMN 252
Query: 239 GTMLG---FYPVRVLPSKTAIAPVNPTF-LPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
G G Y R ++ F R E + + +Y NID VT +++
Sbjct: 253 GLKFGSKNLYVARAQKKAEREQILHRQFEEKRKEQILKYQASNLYVKNIDDDVTDKELRD 312
Query: 295 FFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 348
F S CG + ++++ D + ++ FV F+ E A A+ + +G + P+ ++
Sbjct: 313 LFSS-CGTITSVKVMRDDKGISKGFGFVCFSNPEEANKAVRSFNGCMFHRKPLYIA 367
>gi|346972403|gb|EGY15855.1| RNA-binding protein rsd1 [Verticillium dahliae VdLs.17]
Length = 570
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 5/179 (2%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D S +VEF E+
Sbjct: 179 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQRSKGVGYVEFKSEDT 238
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
AL L G L P+ V ++ T + +Y NI VT+
Sbjct: 239 VTQALQLTGQKLLGIPIIVQLTEAEKNRQVRTTEAAGTQSNSIPFHRLYVGNIHFNVTEQ 298
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
D++ FE GE++ ++L D +R FV++ A A AL +G L PIRV
Sbjct: 299 DLQAVFEPF-GELEFVQLQKDDTGRSRGYGFVQYRDAGQAREALEKMNGFDLAGRPIRV 356
>gi|19347816|gb|AAL86321.1| putative poly(A)-binding protein [Arabidopsis thaliana]
Length = 613
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 73/174 (41%), Gaps = 16/174 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD-EEGARAALS 236
++YV D+D VT+ QL F G VV R+C D L + +V FT+ ++ ARA
Sbjct: 21 SLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQE 80
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L L P+RV+ S R R + I+ N+D+ + + F
Sbjct: 81 LNYIPLYGKPIRVMYSH------------RDPSVRRSGAGNIFIKNLDESIDHKALHDTF 128
Query: 297 ESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
S V + S FV++A ESA A+ +G +L + V P
Sbjct: 129 SSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGP 182
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 12/136 (8%)
Query: 126 NGFGYTN--NFIMHTDGTANTNGHTTTRRKRN-GYSQGK--RRMNCRTSNAQQ-----DE 175
GFG+ N N + NGH ++ G +Q K R R Q D+
Sbjct: 239 KGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADK 298
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARA 233
+YV ++D +++E+L +F G V ++ DPN + + FV F T EE A
Sbjct: 299 FQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEA 358
Query: 234 ALSLAGTMLGFYPVRV 249
L+G M+ P+ V
Sbjct: 359 MSQLSGKMIESKPLYV 374
>gi|432114293|gb|ELK36221.1| Splicing factor 3B subunit 4 [Myotis davidii]
Length = 379
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|391865004|gb|EIT74296.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 1290
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 16/173 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
T++V++ + E + LF G+++D R N+ RF +V+F E A +A L
Sbjct: 907 TLFVTNFPPEADENYIRGLFREYGEIIDVRFPSLKYNTHRRFCYVQFKTAEAAHSATKLD 966
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE---MCSRTIYCTNIDKKVTQGDIKLF 295
GT +G T A ++ P + +R R I+ +N+D K ++ D++
Sbjct: 967 GTTVG-------KGLTLTAKISD---PSRKQDRHGPIYEGREIHVSNVDFKASERDVQEL 1016
Query: 296 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
F S G V+ +RL ++ +V F+ E A AAL G S + V
Sbjct: 1017 F-SKYGTVELVRLPRKVDGGSKGFGYVVFSNKEEATAALAMDGQEYRSRTLHV 1068
>gi|226287551|gb|EEH43064.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 761
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 55 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 114
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 115 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 162
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 163 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGML 206
>gi|195584475|ref|XP_002082032.1| GD11341 [Drosophila simulans]
gi|194194041|gb|EDX07617.1| GD11341 [Drosophila simulans]
Length = 379
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 25/183 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +RR+ V++ ++D+ + + + F G ++ C++ D + +
Sbjct: 73 IRIMWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGY 132
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 133 GFVHFETEEAANTSIDKVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLF 182
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIA 331
+Y N + +K FFE G++ +++ ++ +AF AE+A+
Sbjct: 183 TNVYVKNFTEDFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQ 241
Query: 332 ALN 334
ALN
Sbjct: 242 ALN 244
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
++YV D+ Q V E L F + G V+ R+C D L +A+V F A AL
Sbjct: 3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD- 61
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
+ F VR P + + +P+ R ++ N+D+ + I F
Sbjct: 62 ---TMNFDLVRNKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDRAIDNKAIYDTF- 110
Query: 298 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRV 347
S G + ++ D + +++ FV F E+A +++ +G +L + V
Sbjct: 111 SAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYV 162
>gi|195050249|ref|XP_001992854.1| GH13506 [Drosophila grimshawi]
gi|193899913|gb|EDV98779.1| GH13506 [Drosophila grimshawi]
Length = 628
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 13/177 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALS 236
RTV+ + Q+V L F + G+V D R+ C A++EF D E AL
Sbjct: 271 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALALG 330
Query: 237 LAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L+G L P+ V + K + P F P+ +Y ++ +T+ ++
Sbjct: 331 LSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKL----HTGPMRLYVGSLHFNITEDMLR 386
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
FE G++ ++L+ D + S F+ + A+ A AL +G L P++V
Sbjct: 387 GIFEPF-GKIDVIQLIMDNETGRSKGYGFITYHNADDAKKALEQLNGFELAGRPMKV 442
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 261 PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHSTRI 318
PT L S +ER+ +RT++C + ++V D++ FF SV G+V+ +RL+ + I
Sbjct: 260 PTEL--SPEERD--ARTVFCIQLSQRVRARDLEEFFSSV-GKVRDVRLITCNKTKRFKGI 314
Query: 319 AFVEFAMAESAIAALNCSGAVLGSLPIRV 347
A++EF ES AL SG L +PI V
Sbjct: 315 AYIEFEDPESVALALGLSGQRLLGVPIMV 343
>gi|156058654|ref|XP_001595250.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980]
gi|154701126|gb|EDO00865.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 501
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 232
E +R +YV +D +VTEE L +F T G V + +I D NS + FVE+ D A R
Sbjct: 85 EPNKRALYVGGLDPRVTEEVLRQIFETTGHVQNVKIIPDKNSKGFNYGFVEYDDPGAAER 144
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 291
A +L G + +R VN + + ++ + + I+ ++ +V +
Sbjct: 145 AMQTLNGRRVHQAEIR----------VNWAYQSNTSNKEDTSNHFHIFVGDLSNEVND-E 193
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 346
+ L S G V R++ D + AF E AE A+++++ G LGS IR
Sbjct: 194 VLLQAFSAFGSVSEARVMWDMKTGRSRGYGFAAFRERQDAEKALSSMD--GEWLGSRAIR 251
>gi|121710854|ref|XP_001273043.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus clavatus NRRL
1]
gi|119401193|gb|EAW11617.1| pre-mRNA splicing factor (Prp24), putative [Aspergillus clavatus NRRL
1]
Length = 1310
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 16/173 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
T++V++ E + LF G+++D R N+ RF +V+F E A A+ L
Sbjct: 916 TLFVTNFPSTADESYIRNLFHEYGEIIDVRFPSLKYNTHRRFCYVQFKSAEDAHNAVQLD 975
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE---MCSRTIYCTNIDKKVTQGDIKLF 295
G+ +G + + V P + +R R I+ +NID K ++ D+K
Sbjct: 976 GSKVG----------SDLNLVVKISDPSRKQDRHGPIYEGREIHVSNIDWKASEDDLKDL 1025
Query: 296 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
F S G V+ +R+ ++ ++ F+ E A AAL S P++V
Sbjct: 1026 F-SKYGRVETVRIPRKVDGGSKGFGYIVFSTKEEANAALAMHEQEFRSRPLQV 1077
>gi|19920866|ref|NP_609095.1| CG11266, isoform B [Drosophila melanogaster]
gi|24582412|ref|NP_723243.1| CG11266, isoform A [Drosophila melanogaster]
gi|7297213|gb|AAF52478.1| CG11266, isoform A [Drosophila melanogaster]
gi|15292031|gb|AAK93284.1| LD35730p [Drosophila melanogaster]
gi|22945834|gb|AAN10614.1| CG11266, isoform B [Drosophila melanogaster]
gi|220946034|gb|ACL85560.1| CG11266-PA [synthetic construct]
gi|220955788|gb|ACL90437.1| CG11266-PA [synthetic construct]
Length = 594
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 12/162 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALS 236
RTV+ + Q+V L F + G+V D R+ C A++EF D E AL
Sbjct: 237 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFDDPESVALALG 296
Query: 237 LAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L+G L P+ V + K + P F P+S +Y ++ +T+ ++
Sbjct: 297 LSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKS----HTGPMRLYVGSLHFNITEDMLR 352
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL 333
FE G++ ++L+ D + S F+ + A+ A AL
Sbjct: 353 GIFEPF-GKIDAIQLIMDTETGRSKGYGFITYHNADDAKKAL 393
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 261 PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHSTRI 318
PT L S +ER+ +RT++C + ++V D++ FF SV G+V+ +RL+ + I
Sbjct: 226 PTEL--SPEERD--ARTVFCIQLSQRVRARDLEEFFSSV-GKVRDVRLITCNKTKRFKGI 280
Query: 319 AFVEFAMAESAIAALNCSGAVLGSLPIRV 347
A++EF ES AL SG L +PI V
Sbjct: 281 AYIEFDDPESVALALGLSGQRLLGVPIMV 309
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 16/187 (8%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG--DPNSVLRFAFVEFTDE 228
AQQ+ ++V + +V ++ L F G+V D R+ + FV F +
Sbjct: 121 AQQENQGNYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRK 180
Query: 229 EGARAALSLA-GTMLGFYPVRVLPSKTAIAPVNPTFLP-RSEDE--REMCSR--TIYCTN 282
E A A+ + G L ++V + IA + T P RS DE E S+ T+Y N
Sbjct: 181 EDAETAMQMMNGEKLEGRNIKVNWVTSNIA--SKTEQPKRSYDEINNETSSQNCTVYIGN 238
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA-LNCSGAVLG 341
I K V D+K G ++ +RL D + AF++F+ ESA +A L C+G ++
Sbjct: 239 IPKNVESDDLKQLLAEY-GSIEEVRLNKDKGY----AFIKFSKHESATSAILMCNGKIIN 293
Query: 342 SLPIRVS 348
+R S
Sbjct: 294 GSTLRCS 300
>gi|302904116|ref|XP_003049006.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729940|gb|EEU43293.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 474
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 21/180 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS-VLRFAFVEFTDEEGA-R 232
E +R +YV +DQ+VTE+ L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 80 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAER 139
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 291
A +L G + +R VN + + ++ + + I+ ++ +V +
Sbjct: 140 AMQTLNGRRVHQSEIR----------VNWAYQSNTSNKEDTSNHFHIFVGDLSNEVND-E 188
Query: 292 IKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIR 346
+ L S G V R++ D + S FV F AE A+++++ G LGS IR
Sbjct: 189 VLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMD--GEWLGSRAIR 246
>gi|225438781|ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|296082381|emb|CBI21386.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 20/181 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 232
+ + ++YV D++ VT+ L LF G VV R+C D ++ L + +V + + + A
Sbjct: 28 QFVSTSLYVGDLESNVTDSHLYDLFGQLGPVVSVRVCRDLSTRRSLGYGYVNYGNTQDAA 87
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL ML F P+ P + + +P+ R + I+ N+DK + D
Sbjct: 88 RALD----MLNFTPLNGKPIRIMYSFRDPSI-------RRSGTANIFIKNLDKAI---DN 133
Query: 293 KLFFE--SVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVS 348
K ++ S G + ++ D S FV+F ESA A + +G +L + V
Sbjct: 134 KALYDTFSTFGAILSCKIATDASGQSKGYGFVQFDNEESAKNATDKLNGMLLNDKQVYVG 193
Query: 349 P 349
P
Sbjct: 194 P 194
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+YV ++D + +++L LF G + C++ DPN + R + FV F T EE +RA +
Sbjct: 316 LYVKNLDDSIADDKLRELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASRALADMN 375
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 376 GKMVASKPLYV 386
>gi|367051094|ref|XP_003655926.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
gi|347003190|gb|AEO69590.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
Length = 500
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 83/180 (46%), Gaps = 21/180 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 232
E +R +YV +D +VTE+ L +F T G V +I D N+ + FVE+ D A R
Sbjct: 86 EPNKRALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNARGYNYGFVEYDDPGAAER 145
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 291
A +L G + +R VN + + ++ + + I+ ++ +V +
Sbjct: 146 AMQTLNGRRVHQSEIR----------VNWAYQSNNANKEDTSNHFHIFVGDLSNEVND-E 194
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 346
+ L S G V R++ D + +AF E A AE A+++++ G LGS IR
Sbjct: 195 VLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMD--GEWLGSRAIR 252
>gi|222635819|gb|EEE65951.1| hypothetical protein OsJ_21832 [Oryza sativa Japonica Group]
Length = 710
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 9/176 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLA 238
VYV ++ + ++ L F + G + + D N + R F FV F E AR A+ +L
Sbjct: 266 VYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNLN 325
Query: 239 GTMLG---FYPVRVLPSKTAIAPVNPTF-LPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
G +G Y R A + F +++ ++ + +Y N+D + ++
Sbjct: 326 GKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHLRK 385
Query: 295 FFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESA-IAALNCSGAVLGSLPIRVS 348
FE GEV +++ D + S FV FA E A A L +G ++G P+ V+
Sbjct: 386 LFECF-GEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMNGKMVGKKPLYVA 440
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD---PNSVLRFAFVEFTDEEGA-RAAL 235
++YV D++ V E+QL LF V +C D L + +V F E A RA
Sbjct: 85 SLYVGDLEASVGEDQLVALFSQVAPVASAYVCRDIAGGRKSLGYGYVNFMSREDATRAME 144
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
+L T++ P+RV+ S +PT R+ ++ N++ + +
Sbjct: 145 NLNFTVVNGKPIRVMFSNR-----DPTL-------RKSGLANVFIKNLEPNIDNKSLYEM 192
Query: 296 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGS 342
F S G + ++ D+ ++ F++F SA A+N +L +
Sbjct: 193 FSSF-GTILSSKVATDFNGKSKGYGFIQFESESSAKDAINGLNGMLAN 239
>gi|213407206|ref|XP_002174374.1| U4/U6 snRNA-associated-splicing factor PRP24 [Schizosaccharomyces
japonicus yFS275]
gi|212002421|gb|EEB08081.1| U4/U6 snRNA-associated-splicing factor PRP24 [Schizosaccharomyces
japonicus yFS275]
Length = 999
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 23/194 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
T++V++ E+ + LF G VV R N+ RF +V+ E A L L
Sbjct: 659 TLFVTNFPPSFDEQAITALFEPFGAVVQVRFPSLKFNARRRFCYVQMRTPEEAHNTLQLN 718
Query: 239 GTML-GFYPVRVLPSKTAIAPVNPTFLPRSEDERE---MCSRTIYCTNIDKKVTQGDIKL 294
G +L G + ++V S P ++ RE R +Y TNID T+ D++
Sbjct: 719 GKLLEGNFELKVHLSD-----------PDNKQSREGPIYEKRELYVTNIDFACTKTDVEK 767
Query: 295 FFESVCGEVQRLRL--LGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGS--LPIRVSPS 350
FF S G V+ +RL Y+H+ +V + + A AL+ +G LGS L + +S +
Sbjct: 768 FF-SRYGSVENVRLPSRNPYRHAG-FGYVVMSNKDEAERALSATGERLGSRVLNVVISVA 825
Query: 351 KTPVRP-RAPRPPL 363
K P + + +PP+
Sbjct: 826 KPPKKVINSSKPPV 839
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 21/179 (11%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-CGDPNSVLRFAFVEFTDEEGARAALS 236
+R +YV++ID T+ + F G V + R+ +P F +V ++++ A ALS
Sbjct: 748 KRELYVTNIDFACTKTDVEKFFSRYGSVENVRLPSRNPYRHAGFGYVVMSNKDEAERALS 807
Query: 237 LAGTMLGFYPVRVL-----PSKTAIAPVNP--------TFLPRSEDEREMCSRTIYCTNI 283
G LG + V+ P K I P T LPR E ++ ++++ N+
Sbjct: 808 ATGERLGSRVLNVVISVAKPPKKVINSSKPPVSTKPSGTELPRVTLE-QVHNKSLGVMNV 866
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA-MAESAIAALNCSGAVLG 341
D+ V + ++ FE GE+ R+ L ++ A VE+ A++ AA++ G L
Sbjct: 867 DETVNEARLRQMFEPY-GELFRVVLHPEHNG----AIVEYKDPAKAGKAAMSVEGYELA 920
>gi|145231104|ref|XP_001389816.1| RNA-binding protein rsd1 [Aspergillus niger CBS 513.88]
gi|134055944|emb|CAK37421.1| unnamed protein product [Aspergillus niger]
gi|350638781|gb|EHA27137.1| hypothetical protein ASPNIDRAFT_46267 [Aspergillus niger ATCC 1015]
Length = 570
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 15/194 (7%)
Query: 163 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSV 217
R RT +DE RRT++V + ++ ++L F G Q+V R+ G V
Sbjct: 164 RSRERTPEPTEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV 223
Query: 218 LRFAFVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCS 275
+VEF E+ A+ L G L P+ ++ ++ NP S +
Sbjct: 224 ---GYVEFKSEDSVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE--ASSGNNHAAPF 278
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL- 333
+Y NI +T+ D++ FE GE++ ++L D +R FV+F A AL
Sbjct: 279 HRLYVGNIHFSITESDLQNVFEPF-GELEFVQLQKDETGRSRGYGFVQFRDPNQAREALE 337
Query: 334 NCSGAVLGSLPIRV 347
+G L IRV
Sbjct: 338 KMNGFDLAGRAIRV 351
>gi|126717485|gb|AAI33469.1| PABPN1 protein [Bos taurus]
Length = 296
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 172 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 228
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 229 SLALDESLFRGRQIKVIPKRT 249
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 164 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 222
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 223 KESVRTSLALDESLFRGRQIKVIPKRT 249
>gi|126010727|gb|AAI33552.1| PABPN1 protein [Bos taurus]
Length = 275
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 226
++ E R++YV ++D T E+L F CG V + C + G P FA++EF+
Sbjct: 134 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 190
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
D+E R +L+L ++ ++V+P +T
Sbjct: 191 DKESVRTSLALDESLFRGRQIKVIPKRT 218
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 133 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 191
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 192 KESVRTSLALDESLFRGRQIKVIPKRT 218
>gi|19114289|ref|NP_593377.1| mRNA export shuttling protein [Schizosaccharomyces pombe 972h-]
gi|3123239|sp|P31209.2|PABP_SCHPO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|2104439|emb|CAB08762.1| mRNA export shuttling protein [Schizosaccharomyces pombe]
Length = 653
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + G V R+C D + L +A+V F + E+G +A
Sbjct: 81 SLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDE 140
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+M + ++ N+D + + F
Sbjct: 141 LNYTLIKGRPCRIMWSQ------------RDPSLRKMGTGNVFIKNLDPAIDNKALHDTF 188
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
S G++ ++ D + + FV F ESA AA+ + +G +L + V
Sbjct: 189 -SAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYV 240
>gi|194374387|dbj|BAG57089.1| unnamed protein product [Homo sapiens]
Length = 168
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 226
++ E R++YV ++D T E+L F CG V + C + G P FA++EF+
Sbjct: 37 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 93
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
D+E R +L+L ++ ++V+P +T
Sbjct: 94 DKESVRTSLALDESLFRGRQIKVIPKRT 121
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 36 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 94
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 95 KESVRTSLALDESLFRGRQIKVIPKRT 121
>gi|261199248|ref|XP_002626025.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239594233|gb|EEQ76814.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 783
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 56 SLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 163
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 164 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGML 207
>gi|225442420|ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Vitis vinifera]
Length = 630
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 16/163 (9%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 232
E+ + +YV D+D +V+E +L +F G +V R+C D S L +A+V F A
Sbjct: 25 ELHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDAS 84
Query: 233 AALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
AL+ L T L P+R++ S P R+ ++ N+D +
Sbjct: 85 KALACLNHTKLMGKPMRIMWSHRDPLP------------RKTGLANLFVKNLDPSINSAS 132
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN 334
++ F G + ++ + S FV+F +SA AALN
Sbjct: 133 LQDIFCKF-GNILSCKVAEENGKSKCFGFVQFDSDDSATAALN 174
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 20/190 (10%)
Query: 167 RTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAF 222
R + +D + R+T ++V ++D + L +F G ++ C++ + F F
Sbjct: 101 RIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVAEENGKSKCFGF 160
Query: 223 VEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCT 281
V+F ++ A AAL +L TML ++ SK R E E +Y
Sbjct: 161 VQFDSDDSATAALNALNDTMLD--GKKLFVSKFVKK------CERKEASEETKFTNVYVK 212
Query: 282 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAM---AESAIAALNCSG 337
N+ + +T+ I+ F S G+V + ++ D +R FV F A+ A+ ALN G
Sbjct: 213 NLGEDLTEDIIRDKF-SEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEALN--G 269
Query: 338 AVLGSLPIRV 347
A+LGS + V
Sbjct: 270 AMLGSKKLFV 279
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF-TDEEGARAALSLA 238
+YV ++D V +++L F +CGQ+ ++ + + + F FV F T EE +A +L
Sbjct: 311 LYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLN 370
Query: 239 GTML 242
GT+L
Sbjct: 371 GTLL 374
>gi|224137600|ref|XP_002327166.1| predicted protein [Populus trichocarpa]
gi|222835481|gb|EEE73916.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 232
+ + ++YV D+D VT+ QL +F GQVV R+C D ++ L + +V +++ + A
Sbjct: 8 QFVPTSLYVGDLDFNVTDSQLYDVFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAA 67
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL + L F P+ P + + +P+ R+ I+ N+DK + +
Sbjct: 68 RALDV----LNFTPLNNKPIRIMYSHRDPSI-------RKSGMANIFIKNLDKGIDHKAL 116
Query: 293 KLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALNCSGAVL 340
F S G + ++ D S FV+F E+A A++ +L
Sbjct: 117 HDTFSSF-GNILSCKVATDASGQSKGYGFVQFDSEEAAQNAIDKLNGML 164
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D + +E+L LF G + C++ DP+ + R + FV F T EE +RA +
Sbjct: 296 LYIKNLDDSINDEKLKELFSDFGAITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEMN 355
Query: 239 GTMLGFYPVRV 249
G ML P+ V
Sbjct: 356 GKMLISKPLYV 366
>gi|194210863|ref|XP_001488649.2| PREDICTED: splicing factor 3B subunit 4-like [Equus caballus]
Length = 450
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|195577213|ref|XP_002078467.1| GD23448 [Drosophila simulans]
gi|194190476|gb|EDX04052.1| GD23448 [Drosophila simulans]
Length = 608
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 15/193 (7%)
Query: 148 TTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 207
T + R+R+ + +R S ++D RTV+ + Q+V L F + G+V D
Sbjct: 223 TNSPRRRSPANGAERTTPTELSPEERDA---RTVFCIQLSQRVRARDLEEFFSSVGKVRD 279
Query: 208 CRI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPT 262
R+ C A++EF D E AL L+G L P+ V + K + P
Sbjct: 280 VRLITCNKTKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPA 339
Query: 263 FLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAF 320
F P+S +Y ++ +T+ ++ FE G++ ++L+ D + S F
Sbjct: 340 FQPKS----HTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDAIQLIMDTETGRSKGYGF 394
Query: 321 VEFAMAESAIAAL 333
+ + A+ A AL
Sbjct: 395 ITYHNADDAKKAL 407
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 261 PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHSTRI 318
PT L S +ER+ +RT++C + ++V D++ FF SV G+V+ +RL+ + I
Sbjct: 240 PTEL--SPEERD--ARTVFCIQLSQRVRARDLEEFFSSV-GKVRDVRLITCNKTKRFKGI 294
Query: 319 AFVEFAMAESAIAALNCSGAVLGSLPIRV 347
A++EF ES AL SG L +PI V
Sbjct: 295 AYIEFDDPESVALALGLSGQRLLGVPIMV 323
>gi|195391714|ref|XP_002054505.1| GJ22770 [Drosophila virilis]
gi|194152591|gb|EDW68025.1| GJ22770 [Drosophila virilis]
Length = 401
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 16/165 (9%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 237
++V D+ ++ +QL F G++ DCR+ DP ++ + FV F + A A++ +
Sbjct: 69 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 128
Query: 238 AGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT--- 288
G LG + R P+ A + P ++ + T+YC I+ ++
Sbjct: 129 NGQWLGSRSIRTNWATRKPPATKADMNIKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 188
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 333
+I S G +Q +R+ D + AFV F+ E+A A+
Sbjct: 189 NEEILQKTFSPYGTIQEIRVFKDKGY----AFVRFSTKEAATHAI 229
>gi|198430188|ref|XP_002121753.1| PREDICTED: similar to Nucleolysin TIAR (TIA-1-related protein)
[Ciona intestinalis]
Length = 476
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 15/160 (9%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGAR 232
+DE +T+YV ++D V+E + LF G C++ DP + FVEF + A
Sbjct: 20 EDEAYPKTLYVGNLDPLVSESLIMELFCVIGPCKSCKMITDPAGGDPYCFVEFYEHSHAL 79
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGD 291
AA G R + K + + R ++R+ + I+ ++ + T D
Sbjct: 80 AA-------HGAMNQRKILGK----EIRVNWATRPSNKRDTSNHHHIFVGDLAPETTSDD 128
Query: 292 IKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESA 329
+K +F + G V R++ D Q S FV F + A
Sbjct: 129 LKTYFSRI-GIVSDARVMRDLQTNKSKGYGFVSFVNYQDA 167
>gi|168026214|ref|XP_001765627.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168026222|ref|XP_001765631.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683053|gb|EDQ69466.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683057|gb|EDQ69470.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 572
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 27/179 (15%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDCRICGDPNSVLRFAFVEFTDEEGARAA 234
RT++V +I+ V + +L LF G + C+ G F + + D AR+A
Sbjct: 34 RTLFVRNINSNVEDTELRQLFEQYGAIRTLYTACKHRG-------FVMISYYDIRAARSA 86
Query: 235 LSLAGTMLGFYPVR--VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
+ L P+R L +I NP+ ++++ T+ N+D V+ ++
Sbjct: 87 M----RALQNKPLRRRKLDIHFSIPKDNPS-------DKDVNQGTLVVFNLDASVSNDEL 135
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
+L F V GEV+ +R +H I F + AE+A+ ALN S + I++ PS+
Sbjct: 136 RLIF-GVYGEVKEIRETPHKRHHKFIEFYDVRSAEAALRALNRSD--IAGKRIKLEPSR 191
>gi|315043566|ref|XP_003171159.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
gi|311344948|gb|EFR04151.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
Length = 589
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ ++L F G Q+V R+ G V +VEF +
Sbjct: 190 EDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKN 246
Query: 228 EEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
EE A+ L G L P+ ++ ++ NP S +++ + +Y NI
Sbjct: 247 EESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPD-AHSSNNQQSIPFHRLYVGNIHF 305
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSL 343
+T+ D++ FE GE+ ++L + ++ FV+F A AL +G L
Sbjct: 306 SITESDLQNVFEPF-GELDFVQLQREEAGRSKGYGFVQFRDPNQAREALEKMNGFDLAGR 364
Query: 344 PIRV 347
PIRV
Sbjct: 365 PIRV 368
>gi|149063930|gb|EDM14200.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Rattus
norvegicus]
Length = 184
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 60 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 116
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 117 SLALDESLFRGRQIKVIPKRT 137
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 52 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 110
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 111 KESVRTSLALDESLFRGRQIKVIPKRT 137
>gi|27807029|ref|NP_776994.1| polyadenylate-binding protein 2 [Bos taurus]
gi|46396285|sp|Q28165.3|PABP2_BOVIN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|1051125|emb|CAA62006.1| polyA binding protein II [Bos taurus]
gi|126920947|gb|AAI33559.1| Poly(A) binding protein, nuclear 1 [Bos taurus]
gi|296483592|tpg|DAA25707.1| TPA: polyadenylate-binding protein 2 [Bos taurus]
Length = 306
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 172 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 228
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 229 SLALDESLFRGRQIKVIPKRT 249
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 164 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 222
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 223 KESVRTSLALDESLFRGRQIKVIPKRT 249
>gi|403333973|gb|EJY66125.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 1017
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 25/190 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SL 237
TVYV + Q E++L F G + R+ +PN L+ F +++F ++ + A+ SL
Sbjct: 736 TVYVHGLPQTCNEQKLREHFKEIGDIEQVRLIRNPNGTLKGFGYIQFLSKKSVQVAIESL 795
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
+ + + V +K+ ++ RE T++ N+D ++ ++K + E
Sbjct: 796 NKSKIDNRTISVERNKS------------KKEAREDIGFTVFVKNLDYHTSEDELKSYSE 843
Query: 298 SVCGEVQRLRLLGDYQ-HSTRIAFVEF--------AMAESAIAALNCS-GAVLGSLPIRV 347
GEV+R+ L D + HS F+EF A+ + I L G ++ SL +V
Sbjct: 844 DNFGEVKRVTLSKDEKGHSKGHGFIEFLDEASMNKAIEKKEITDLGRRIGIIMKSLR-QV 902
Query: 348 SPSKTPVRPR 357
+ KT R
Sbjct: 903 TQPKTSFSDR 912
>gi|356516321|ref|XP_003526844.1| PREDICTED: uncharacterized protein LOC100802446 [Glycine max]
Length = 549
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 27/188 (14%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL 235
+RTV+ + + +E F G+V D R+ D NS ++EF D A+
Sbjct: 181 QRTVFAYQMPLKASERDAYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAI 240
Query: 236 SLAGTMLGFYPVRVLPSKT------------AIAPVNPTFLPRSEDEREMCSRTIYCTNI 283
+L+G +L PV V PS+ A V P R +Y N+
Sbjct: 241 ALSGQLLLGQPVMVKPSEAEKNLVQSNATSGAAGVVGPY---------GAVDRKLYVGNL 291
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNCSGAV-L 340
+T+ ++ FE G V+ ++L D + H FV+FA E A AA + +G + +
Sbjct: 292 HFNMTESQLREIFEPF-GPVEIVQLPLDLETGHCKGFGFVQFAHLEHAKAAQSLNGKLEI 350
Query: 341 GSLPIRVS 348
I+VS
Sbjct: 351 AGRTIKVS 358
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVE 322
P ++ ER+ RT++ + K ++ D FF S G+V+ +RL+ D + S + ++E
Sbjct: 173 PEADPERD--QRTVFAYQMPLKASERDAYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIE 229
Query: 323 FAMAESAIAALNCSGAVLGSLPIRVSPSK 351
F A S A+ SG +L P+ V PS+
Sbjct: 230 FYDAMSVPMAIALSGQLLLGQPVMVKPSE 258
>gi|328876647|gb|EGG25010.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 748
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 85/181 (46%), Gaps = 19/181 (10%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA 221
CR + +D R++ ++V ++++ V L F T G ++ C+I + +
Sbjct: 203 CRIMWSHRDPTKRKSNVGNIFVKNLEKNVDNALLFDTFSTYGNILSCKIEYEKGISKGYG 262
Query: 222 FVEFTDEEGA-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIY 279
+V F ++E + +A L + GT+L P+ V P F+ + E +E + ++
Sbjct: 263 YVHFENQESSEQAILKVNGTILLGKPIIVEP-----------FVSKVERFKEKKNENKLF 311
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGA 338
NID+ VT ++ S GE++ + D + +AFVEF +E A A L + A
Sbjct: 312 IKNIDENVTSEMLQQEL-SRFGEIESCNIRTDPTGKPKGLAFVEFKTSEDAQALLESTEA 370
Query: 339 V 339
+
Sbjct: 371 I 371
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 23/178 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQ--VVDCRICGDPNSV--LRFAFVEFTDEEGARAAL 235
++YV D+ Q+V E LA LF G+ V +C D ++ L +A+V F + A AL
Sbjct: 131 SLYVGDLSQEVNELILAELFSKVGRTAVASIHVCRDSATLRSLGYAYVNFYNSVDAERAL 190
Query: 236 -SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
+L +++ P R++ S R +R+ I+ N++K V D L
Sbjct: 191 DTLNYSLILGRPCRIMWSH------------RDPTKRKSNVGNIFVKNLEKNV---DNAL 235
Query: 295 FFE--SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESA-IAALNCSGAVLGSLPIRVSP 349
F+ S G + ++ + S +V F ES+ A L +G +L PI V P
Sbjct: 236 LFDTFSTYGNILSCKIEYEKGISKGYGYVHFENQESSEQAILKVNGTILLGKPIIVEP 293
>gi|195381687|ref|XP_002049579.1| GJ21671 [Drosophila virilis]
gi|194144376|gb|EDW60772.1| GJ21671 [Drosophila virilis]
Length = 645
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 80/183 (43%), Gaps = 25/183 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +RR+ V++ ++D+ + + + F G ++ C++ D + +
Sbjct: 73 IRIMWSQRDPSLRRSGVGNVFIKNLDKAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGY 132
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 133 GFVHFETEEAANTSIDKVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLF 182
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIA 331
+Y N ++ +K FFE G++ +++ ++ +A+ AE+A+
Sbjct: 183 TNVYVKNFTEEFDDEKLKEFFEPY-GKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQ 241
Query: 332 ALN 334
ALN
Sbjct: 242 ALN 244
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
++YV D+ Q + E L F T G V+ R+C D L +A+V F A AL
Sbjct: 3 SLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALD- 61
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
+ F +R P + + +P+ R ++ N+DK + I F
Sbjct: 62 ---TMNFDLIRNKPIRIMWSQRDPSL-------RRSGVGNVFIKNLDKAIDNKAIYDTF- 110
Query: 298 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN-CSGAVLGSLPIRV 347
S G + ++ D + +++ FV F E+A +++ +G +L + V
Sbjct: 111 SAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYV 162
>gi|149063931|gb|EDM14201.1| poly(A) binding protein, nuclear 1, isoform CRA_c [Rattus
norvegicus]
Length = 194
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 60 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 116
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 117 SLALDESLFRGRQIKVIPKRT 137
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 52 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 110
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 111 KESVRTSLALDESLFRGRQIKVIPKRT 137
>gi|148704375|gb|EDL36322.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Mus musculus]
Length = 294
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 226
++ E R++YV ++D T E+L F CG V + C + G P FA++EF+
Sbjct: 163 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 219
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
D+E R +L+L ++ ++V+P +T
Sbjct: 220 DKESVRTSLALDESLFRGRQIKVIPKRT 247
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 162 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 220
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 221 KESVRTSLALDESLFRGRQIKVIPKRT 247
>gi|440893202|gb|ELR46056.1| Polyadenylate-binding protein 2, partial [Bos grunniens mutus]
Length = 189
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 55 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 111
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 112 SLALDESLFRGRQIKVIPKRT 132
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 47 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 105
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 106 KESVRTSLALDESLFRGRQIKVIPKRT 132
>gi|209877643|ref|XP_002140263.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555869|gb|EEA05914.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 302
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 83/194 (42%), Gaps = 25/194 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTC-GQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
++++ +I TEE + F +++ P + RF V+F G A+ L
Sbjct: 11 SIFIKNISPLATEESVCKAFEDLKNEILGVSFHVYPGTSQRFCQVDFKTSSGVTNAMGLN 70
Query: 239 GTMLGFYPVRVLPSKTAIAPV-------NPTFLPRSEDER------EMCSRTIYCTNIDK 285
G+ L P+ + T IAPV P P+S +R E SRTI NI +
Sbjct: 71 GSTLLGVPMSI----TVIAPVPIKLNMKYPKISPKSTTQRSANILEERLSRTILVENIPE 126
Query: 286 KVTQGDIKLFFE---SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESA-IAALNCSGAVLG 341
K TQ ++K+FF S+ R +GD S R +EF E A VLG
Sbjct: 127 KFTQNELKIFFSNFGSILDISFEQRQIGD--ESLRCT-IEFENKEEANKVRRQNKDIVLG 183
Query: 342 SLPIRVSPSKTPVR 355
+R+S K+ +R
Sbjct: 184 DRVLRISTPKSMIR 197
>gi|189521749|ref|XP_001923043.1| PREDICTED: polyadenylate-binding protein 2-B-like isoform 1 [Danio
rerio]
Length = 192
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDC-----RICGDPNSVLRFAFVEFTDEEGAR 232
RR++YV ++D T ++L F +CG V R G P FA++EF+D E R
Sbjct: 65 RRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKG---FAYIEFSDRESVR 121
Query: 233 AALSLAGTMLGFYPVRVLPSKTAI 256
A++L T+ ++V P +T I
Sbjct: 122 TAMALDETLFRGRVIKVSPKRTNI 145
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 257 APVNPTFLPRSEDER-EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRL-----RLLG 310
+P F + +ER + R+IY N+D T +++++F S CG V R+ R G
Sbjct: 46 SPEAELFFDMTHEERIDSDRRSIYVGNVDYGATADELEMYFNS-CGHVNRVTIPYNRFTG 104
Query: 311 DYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPV 354
H A++EF+ ES A+ + I+VSP +T +
Sbjct: 105 ---HPKGFAYIEFSDRESVRTAMALDETLFRGRVIKVSPKRTNI 145
>gi|403339762|gb|EJY69142.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 1016
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 87/190 (45%), Gaps = 25/190 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SL 237
TVYV + Q E++L F G + R+ +PN L+ F +++F ++ + A+ SL
Sbjct: 736 TVYVHGLPQTCNEQKLREHFKEIGDIEQVRLIRNPNGTLKGFGYIQFLSKKSVQVAIESL 795
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
+ + + V +K+ ++ RE T++ N+D ++ ++K + E
Sbjct: 796 NKSKIDNRTISVERNKS------------KKEAREDIGFTVFVKNLDYHTSEDELKSYSE 843
Query: 298 SVCGEVQRLRLLGDYQ-HSTRIAFVEF--------AMAESAIAALNCS-GAVLGSLPIRV 347
GEV+R+ L D + HS F+EF A+ + I L G ++ SL +V
Sbjct: 844 DNFGEVKRVTLSKDEKGHSKGHGFIEFLDEASMNKAIEKKEITDLGRRIGIIMKSLR-QV 902
Query: 348 SPSKTPVRPR 357
+ KT R
Sbjct: 903 TQPKTSFSDR 912
>gi|291245050|ref|XP_002742404.1| PREDICTED: MGC81970 protein-like isoform 1 [Saccoglossus
kowalevskii]
Length = 556
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAMAESA 329
E +RT++C + +K+ D++ FF SV G V+ +RL+ D + S IA+VEF S
Sbjct: 155 ERDARTVFCWQLSQKIRPRDMEEFFSSV-GIVRDVRLISDRNSRRSKGIAYVEFQDKNSV 213
Query: 330 IAALNCSGAVLGSLPIRVSPSK 351
AL SG L S+PI V S+
Sbjct: 214 PLALGLSGQKLLSIPIMVQASQ 235
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 12/176 (6%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 236
RTV+ + Q++ + F + G V D R+ D NS A+VEF D+ AL
Sbjct: 159 RTVFCWQLSQKIRPRDMEEFFSSVGIVRDVRLISDRNSRRSKGIAYVEFQDKNSVPLALG 218
Query: 237 LAGTMLGFYPVRVLPSKTAI--APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L+G L P+ V S+ A N L + +Y ++ +T+ ++
Sbjct: 219 LSGQKLLSIPIMVQASQAEKNRAAQNSQNLQKGNS----GPMRLYVGSLHFNITEEMLRG 274
Query: 295 FFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
FE G++ ++L+ D + S F+ F AE A AL +G L P++V
Sbjct: 275 IFEPF-GKIDNIQLMKDNETGRSKGYGFITFHDAEDAKKALEQLNGFELAGRPMKV 329
>gi|239615396|gb|EEQ92383.1| polyadenylate-binding protein [Ajellomyces dermatitidis ER-3]
gi|327356743|gb|EGE85600.1| polyadenylate-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 783
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 56 SLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 163
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 164 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGML 207
>gi|125550587|gb|EAY96296.1| hypothetical protein OsI_18195 [Oryza sativa Indica Group]
Length = 548
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 12/181 (6%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEFTDE 228
+++ E + VYV I +E+ + + F CG + VDC + A + F +
Sbjct: 166 SEESEKNAKKVYVGGIPYYSSEDDIRSFFEACGSITSVDCMTFPESGKFRGIAILTFKTD 225
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
A+ AL+L G +G + +++ P K+ + F P+ E +R +Y N+ +T
Sbjct: 226 AAAQRALALDGADMGGFFLKIQPYKSVREKED--FAPKM---IEGYNR-VYVGNLAWDIT 279
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF--VEFAMAESAIAALNCSGAVLGSLPIR 346
+ D+K FF S C ++ +R D + + V+F+ S A+ V+ P+R
Sbjct: 280 EDDLKKFF-SDC-KISSIRFGTDKETGDFKGYVHVDFSEGTSVAVAMKLDQKVIKGRPVR 337
Query: 347 V 347
+
Sbjct: 338 I 338
>gi|308806325|ref|XP_003080474.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
gi|116058934|emb|CAL54641.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
Length = 504
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 22/177 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEF-TDEEGARAALS 236
++YV D++ VTE QL F + G VV R+C D L +A+V F + + A A
Sbjct: 33 SLYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNFQSSSDAAHAIDV 92
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L ++ P+RVL S+ R R I+ N+DK + D K
Sbjct: 93 LNFQVINGKPIRVLYSQ------------RDPAVRRSGVGNIFIKNLDKAI---DNKALL 137
Query: 297 ESVC--GEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
++ G + ++ D +++ FV+F AE+A AA+ N +G L + V P
Sbjct: 138 DTFAQFGTITSAKVAMDSAGNSKGYGFVQFETAEAAQAAIDNVNGMELNDKQVYVGP 194
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSLA 238
+Y+ ++++ +E+L LF G + CR+ D + R AFV F+ +E RA +
Sbjct: 315 LYIKNLEEGTDDEKLRELFNEFGTITSCRVMRDASGASRGSAFVAFSSPDEATRAVTEMN 374
Query: 239 GTMLGFYPVRV 249
G M+G P+ V
Sbjct: 375 GKMVGAKPLYV 385
>gi|26328001|dbj|BAC27741.1| unnamed protein product [Mus musculus]
Length = 292
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 226
++ E R++YV ++D T E+L F CG V + C + G P FA++EF+
Sbjct: 161 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 217
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
D+E R +L+L ++ ++V+P +T
Sbjct: 218 DKESVRTSLALDESLFRGRQIKVIPKRT 245
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 160 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 218
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 219 KESVRTSLALDESLFRGRQIKVIPKRT 245
>gi|330846765|ref|XP_003295173.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
gi|325074172|gb|EGC28303.1| hypothetical protein DICPUDRAFT_24800 [Dictyostelium purpureum]
Length = 145
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 269 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMA 326
D+ E+ R+IY N+D K T I +F+S CG V R+ +L D H +VEF
Sbjct: 1 DQEEIDGRSIYVGNVDYKSTHDQILAYFQS-CGTVNRITILSDKTTGHPKGCCYVEFLNK 59
Query: 327 ESAIAALNCSGAVLGSLPIRVSPSKT--PVRPRAP 359
ES A+ + ++ I+++P +T P R P
Sbjct: 60 ESINNAMALNDSIFNDRQIKITPKRTNLPYYMRNP 94
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV-----VDCRICGDPNSVLRFAFVEFTD 227
Q+E+ R++YV ++D + T +Q+ F +CG V + + G P +VEF +
Sbjct: 2 QEEIDGRSIYVGNVDYKSTHDQILAYFQSCGTVNRITILSDKTTGHPKGC---CYVEFLN 58
Query: 228 EEGARAALSLAGTMLGFYPVRVLPSKTAI 256
+E A++L ++ +++ P +T +
Sbjct: 59 KESINNAMALNDSIFNDRQIKITPKRTNL 87
>gi|9506945|ref|NP_062275.1| polyadenylate-binding protein 2 [Mus musculus]
gi|46396417|sp|Q8CCS6.3|PABP2_MOUSE RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2351846|gb|AAC00210.1| poly(A) binding protein II [Mus musculus]
gi|33585929|gb|AAH55866.1| Poly(A) binding protein, nuclear 1 [Mus musculus]
gi|148704376|gb|EDL36323.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Mus musculus]
Length = 302
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 226
++ E R++YV ++D T E+L F CG V + C + G P FA++EF+
Sbjct: 161 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 217
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
D+E R +L+L ++ ++V+P +T
Sbjct: 218 DKESVRTSLALDESLFRGRQIKVIPKRT 245
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 160 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 218
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 219 KESVRTSLALDESLFRGRQIKVIPKRT 245
>gi|395545876|ref|XP_003774823.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 621
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ VTE L F G ++ R+C D S L +A+V F A+ L +
Sbjct: 3 SLYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMITRSSLGYAYVNFQQSSDAQRVLET 62
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ ++ PVR++ S+ R R+ I+ N++K + D + F
Sbjct: 63 MNLDVIKGKPVRIMWSQ------------RDPSLRKSGVGNIFVKNLEKSI---DNRALF 107
Query: 297 ESVC--GEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSPSKT 352
++ G + +++ D S FV F ESA A+ +G VL SL + V K+
Sbjct: 108 DAFSGFGNILSCKVVSDENGSKGYGFVHFETQESAEKAIEKMNGIVLKSLKVFVGHFKS 166
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 23/180 (12%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA 221
R +Q+D +R++ ++V ++++ + L F G ++ C++ D N +
Sbjct: 73 VRIMWSQRDPSLRKSGVGNIFVKNLEKSIDNRALFDAFSGFGNILSCKVVSDENGSKGYG 132
Query: 222 FVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F +E A A+ + G +L V V F R E E E+ +R
Sbjct: 133 FVHFETQESAEKAIEKMNGIVLKSLKVFV-----------GHFKSRKERELELGARAREF 181
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAALN 334
+Y N + + + F G ++++ D + S FV +A E A A++
Sbjct: 182 TNVYIKNFGEDMDNARLGEIF-GRFGRALSVKVMTDERGRSKGFGFVSYATHEDAQRAVD 240
>gi|28193136|emb|CAD62310.1| unnamed protein product [Homo sapiens]
Length = 298
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 174 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 230
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 231 SLALDESLFRGRQIKVIPKRT 251
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 166 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 224
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 225 KESVRTSLALDESLFRGRQIKVIPKRT 251
>gi|351697106|gb|EHB00025.1| Polyadenylate-binding protein 2, partial [Heterocephalus glaber]
Length = 189
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 55 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 111
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 112 SLALDESLFRGRQIKVIPKRT 132
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E+ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 47 EERMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 105
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 106 KESVRTSLALDESLFRGRQIKVIPKRT 132
>gi|340725363|ref|XP_003401040.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
terrestris]
gi|350403872|ref|XP_003486932.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Bombus
impatiens]
Length = 592
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
VYV I ++ E+ + FL G + + DP + FAFVE+ E A+ AL +
Sbjct: 122 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 181
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G M+G ++V+ + + P + + +E + +R IY +I + +T+ DIK FE
Sbjct: 182 NGVMIGGRNIKVV-GRPSNMPQAQSVIDEITEESKHYNR-IYIASIHQDLTEDDIKSVFE 239
Query: 298 SVCGEVQRLRLL-GDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 353
+ G + +L G H + F+E+ ++A+ A+ LG +RV + TP
Sbjct: 240 AF-GPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITP 297
>gi|383861059|ref|XP_003706004.1| PREDICTED: poly(U)-binding-splicing factor half pint-like
[Megachile rotundata]
Length = 592
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
VYV I ++ E+ + FL G + + DP + FAFVE+ E A+ AL +
Sbjct: 122 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 181
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G M+G ++V+ + + P + + +E + +R IY +I + +T+ DIK FE
Sbjct: 182 NGVMIGGRNIKVV-GRPSNMPQAQSVIDEITEESKHYNR-IYIASIHQDLTEDDIKSVFE 239
Query: 298 SVCGEVQRLRLL-GDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 353
+ G + +L G H + F+E+ ++A+ A+ LG +RV + TP
Sbjct: 240 AF-GPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITP 297
>gi|356548313|ref|XP_003542547.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 495
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 9/176 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLA 238
+Y+ ++D +TE L F + G+++ I D N + + FAFV + + + A+ A+ ++
Sbjct: 193 LYIKNLDSDITEALLQEKFSSFGKIISLAISKDDNGLSKGFAFVNYENPDDAKKAMEAMN 252
Query: 239 GTMLG---FYPVRVLPSKTAIAPVNPTF-LPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
G G Y R ++ F R E + + +Y NID VT +++
Sbjct: 253 GLQFGSKYLYVARAQKKAEREQILHRQFEEKRKEQILKYQASNLYVKNIDDDVTDKELRD 312
Query: 295 FFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESA-IAALNCSGAVLGSLPIRVS 348
F S CG + ++++ D + ++ FV F+ E A A ++ +G P+ ++
Sbjct: 313 LFSS-CGTITSVKVMRDDKGISKGFGFVCFSNPEEANKAVMSFNGCTFHRKPLYIA 367
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 16/172 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV--LRFAFVEFTDEEGARAALSL 237
++YV D+ V E L F+ G + R+C D ++ L + +V F ++ A A+ L
Sbjct: 13 SIYVGDLHPDVQEHHLFAAFVEFGSIASVRVCRDRVTMNSLCYGYVNFRSQQDAIRAIKL 72
Query: 238 A-GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ L +RV+ +L R + R+ ++ N+ + + F
Sbjct: 73 RNNSYLNGKVIRVM------------WLHRDPNARKSGRGNVFVKNLAGSIDNAGLHDLF 120
Query: 297 ESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
+ + ++ + S FV+F ESA A+ +G+ +G+ I V
Sbjct: 121 KKYGNILSSKVVMSEDGKSKGYGFVQFEWEESANNAIEKLNGSTVGNKQIYV 172
>gi|125555900|gb|EAZ01506.1| hypothetical protein OsI_23538 [Oryza sativa Indica Group]
Length = 669
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 9/176 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLA 238
VYV ++ + ++ L F + G + + D N + R F FV F E AR A+ +L
Sbjct: 243 VYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNLN 302
Query: 239 GTMLG---FYPVRVLPSKTAIAPVNPTF-LPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
G +G Y R A + F +++ ++ + +Y N+D + ++
Sbjct: 303 GKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHLRK 362
Query: 295 FFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESA-IAALNCSGAVLGSLPIRVS 348
FE GEV +++ D + S FV FA E A A L +G ++G P+ V+
Sbjct: 363 LFECF-GEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMNGKMVGKKPLYVA 417
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 18/168 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD---PNSVLRFAFVEFTDEEGA-RAAL 235
++YV D++ V E+QL LF V +C D + L + +V F E A RA
Sbjct: 62 SLYVGDLEASVGEDQLVALFSQVAPVASAYVCRDIAGGSKSLGYGYVNFMSREDATRAME 121
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
+L T++ P+RV+ S +PT R+ ++ N++ + +
Sbjct: 122 NLNFTVVNGKPIRVMFSNR-----DPTL-------RKSGLANVFIKNLEPNIDNKSLYEM 169
Query: 296 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGS 342
F S G + ++ D+ ++ F++F SA A+N +L +
Sbjct: 170 FSSF-GTILSSKVATDFNGKSKGYGFIQFESESSAKDAINGLNGMLAN 216
>gi|242773880|ref|XP_002478329.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
gi|218721948|gb|EED21366.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
Length = 562
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 79/190 (41%), Gaps = 27/190 (14%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE +RTV+V + ++ ++L F G Q+V R+ G V +VEF D
Sbjct: 163 EDERDKRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKD 219
Query: 228 EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--------RTIY 279
E A+ L G L P+ IA + R E S +Y
Sbjct: 220 EASVPLAIQLTGQKLLGIPI--------IAQLTEAEKNRQARNPEASSGQSASAPFHRLY 271
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSG 337
NI +T+ DI+ FE GE++ ++L D +R FV+F A AL +G
Sbjct: 272 VGNIHFSITENDIQNVFEPF-GELEFVQLQKDETGRSRGYGFVQFRDPNQAREALEKMNG 330
Query: 338 AVLGSLPIRV 347
L PIRV
Sbjct: 331 FDLAGRPIRV 340
>gi|50725435|dbj|BAD32907.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
Length = 670
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 79/176 (44%), Gaps = 9/176 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLA 238
VYV ++ + ++ L F + G + + D N + R F FV F E AR A+ +L
Sbjct: 242 VYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNLN 301
Query: 239 GTMLG---FYPVRVLPSKTAIAPVNPTF-LPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
G +G Y R A + F +++ ++ + +Y N+D + ++
Sbjct: 302 GKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHLRK 361
Query: 295 FFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESA-IAALNCSGAVLGSLPIRVS 348
FE GEV +++ D + S FV FA E A A L +G ++G P+ V+
Sbjct: 362 LFECF-GEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMNGKMVGKKPLYVA 416
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 18/168 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD---PNSVLRFAFVEFTDEEGA-RAAL 235
++YV D++ V E+QL LF V +C D L + +V F E A RA
Sbjct: 61 SLYVGDLEASVGEDQLVALFSQVAPVASAYVCRDIAGGRKSLGYGYVNFMSREDATRAME 120
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
+L T++ P+RV+ S +PT R+ ++ N++ + +
Sbjct: 121 NLNFTVVNGKPIRVMFSNR-----DPTL-------RKSGLANVFIKNLEPNIDNKSLYEM 168
Query: 296 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGS 342
F S G + ++ D+ ++ F++F SA A+N +L +
Sbjct: 169 FSSF-GTILSSKVATDFNGKSKGYGFIQFESESSAKDAINGLNGMLAN 215
>gi|169622264|ref|XP_001804541.1| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
gi|187608896|sp|Q0U1G2.3|PABP_PHANO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|160704734|gb|EAT78222.2| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
Length = 744
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 20/179 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 119 CRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGY 178
Query: 221 AFVEFTDEEGARAALS-LAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + E A A+ + G +L V V +P K ++ +E +
Sbjct: 179 GFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKF---------EEMKANFT 229
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALN 334
IY NID VT D + FE G++ + D Q +R FV + E+A A++
Sbjct: 230 NIYVKNIDLDVTDEDFRELFEK-HGDITSASIARDDQGKSRGFGFVNYIRHEAAAVAVD 287
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 17/177 (9%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF 225
T+ AQQ ++YV ++D VTE L LF + GQV R+C D L +A+V +
Sbjct: 37 TTAAQQAHQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNY 96
Query: 226 -TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 284
+ E+G +A L T++ P R++ S+ R R+ ++ N+D
Sbjct: 97 NSSEDGEKALEELNYTVIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLD 144
Query: 285 KKVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ + F + G + ++ D +S FV + AE+A A+ +L
Sbjct: 145 HAIDNKALHDTF-AAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGML 200
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 16/187 (8%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG--DPNSVLRFAFVEFTDE 228
AQQ+ ++V + +V ++ L F G+V D R+ + FV F +
Sbjct: 121 AQQENQGNYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIRK 180
Query: 229 EGARAALSLA-GTMLGFYPVRVLPSKTAIAPVNPTFLP-RSEDE--REMCSR--TIYCTN 282
E A A+ + G L ++V + IA + T P RS DE E S+ T+Y N
Sbjct: 181 EDAETAMQMMNGEKLEGRNIKVNWVTSNIA--SKTEQPKRSYDEINNETSSQNCTVYIGN 238
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAA-LNCSGAVLG 341
I K V D+K G ++ +RL D + AF++F+ ESA +A L C+G ++
Sbjct: 239 IPKNVESDDLKQLLAEY-GSIEEVRLNKDKGY----AFIKFSKHESATSAILMCNGKIIN 293
Query: 342 SLPIRVS 348
+R S
Sbjct: 294 GSTLRCS 300
>gi|380800735|gb|AFE72243.1| polyadenylate-binding protein 2, partial [Macaca mulatta]
Length = 273
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 139 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 195
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 196 SLALDESLFRGRQIKVIPKRT 216
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 131 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 189
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 190 KESVRTSLALDESLFRGRQIKVIPKRT 216
>gi|297694743|ref|XP_002824624.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pongo abelii]
Length = 296
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 172 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 228
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 229 SLALDESLFRGRQIKVIPKRT 249
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 164 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 222
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 223 KESVRTSLALDESLFRGRQIKVIPKRT 249
>gi|260841232|ref|XP_002613832.1| hypothetical protein BRAFLDRAFT_72046 [Branchiostoma floridae]
gi|229299222|gb|EEN69841.1| hypothetical protein BRAFLDRAFT_72046 [Branchiostoma floridae]
Length = 365
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEALLWELFLQAGPVVNTHMPKDRVTQAHQGYGFVEFMSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRVNKAS-------------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FESVCG--------EVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
+++ ++ R G+ + I F F +++AI A+N G L + PI +
Sbjct: 117 YDTFSAFGVILQTPKIMRDPETGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITI 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|147835778|emb|CAN72942.1| hypothetical protein VITISV_011270 [Vitis vinifera]
Length = 185
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 14/156 (8%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFT 226
+ A ++ + ++YV D++ V + QL LF G VV R+C D ++ L + +V ++
Sbjct: 20 AGAGGNQFVTTSLYVGDLELNVNDPQLYDLFNQMGAVVSVRVCRDLSTRRSLGYGYVNYS 79
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 286
+ + A AL + L F P+ P + + +P+ R+ + I+ N+DK
Sbjct: 80 NPQDAARALDV----LNFTPLNGKPLRIMYSHCDPSI-------RKSGTGNIFIKNLDKG 128
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVE 322
+ + F S G + + L YQ++ R+ E
Sbjct: 129 IDHKALHDTF-SAFGNILSCKDLDTYQNNMRLHPWE 163
>gi|201860272|ref|NP_001128480.1| polyadenylate-binding protein 2 [Rattus norvegicus]
gi|149063929|gb|EDM14199.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Rattus
norvegicus]
Length = 302
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 226
++ E R++YV ++D T E+L F CG V + C + G P FA++EF+
Sbjct: 161 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 217
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
D+E R +L+L ++ ++V+P +T
Sbjct: 218 DKESVRTSLALDESLFRGRQIKVIPKRT 245
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 160 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 218
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 219 KESVRTSLALDESLFRGRQIKVIPKRT 245
>gi|348577533|ref|XP_003474538.1| PREDICTED: polyadenylate-binding protein 2-like [Cavia porcellus]
Length = 306
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 172 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 228
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 229 SLALDESLFRGRQIKVIPKRT 249
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E+ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 164 EERMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 222
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 223 KESVRTSLALDESLFRGRQIKVIPKRT 249
>gi|410984123|ref|XP_003998381.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Felis catus]
Length = 277
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLR 219
C +Q E R+VYV ++D T E+L F +CG+V + C + G P
Sbjct: 132 TCPGPPTEQLESDHRSVYVGNVDYGGTAEELEAYFNSCGEVHRVTILCDKFSGHPKG--- 188
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
+A++EF E A+AA++L ++ ++VLP +T + ++ T
Sbjct: 189 YAYIEFAAESSAQAAVALDKSIFRGRVIKVLPKRTNLPGISST 231
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 18/127 (14%)
Query: 228 EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
EEGA A + AG +L P P PT ++ E R++Y N+D
Sbjct: 113 EEGAGA--TPAGQLLS-------PEAGCTCPGPPT------EQLESDHRSVYVGNVDYGG 157
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAMAESAIAALNCSGAVLGSLPI 345
T +++ +F S CGEV R+ +L D H A++EFA SA AA+ ++ I
Sbjct: 158 TAEELEAYFNS-CGEVHRVTILCDKFSGHPKGYAYIEFAAESSAQAAVALDKSIFRGRVI 216
Query: 346 RVSPSKT 352
+V P +T
Sbjct: 217 KVLPKRT 223
>gi|4758876|ref|NP_004634.1| polyadenylate-binding protein 2 [Homo sapiens]
gi|343780920|ref|NP_001230477.1| polyadenylate-binding protein 2 [Sus scrofa]
gi|360039231|ref|NP_001123909.2| polyadenylate-binding protein 2 [Canis lupus familiaris]
gi|114652132|ref|XP_001162168.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pan
troglodytes]
gi|296214561|ref|XP_002753680.1| PREDICTED: polyadenylate-binding protein 2 isoform 2 [Callithrix
jacchus]
gi|395859297|ref|XP_003801976.1| PREDICTED: polyadenylate-binding protein 2 [Otolemur garnettii]
gi|402875708|ref|XP_003901638.1| PREDICTED: polyadenylate-binding protein 2 [Papio anubis]
gi|426376431|ref|XP_004055004.1| PREDICTED: polyadenylate-binding protein 2 [Gorilla gorilla
gorilla]
gi|46403176|sp|Q86U42.3|PABP2_HUMAN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2895276|gb|AAC39596.1| poly(A) binding protein II [Homo sapiens]
gi|15012075|gb|AAH10939.1| Poly(A) binding protein, nuclear 1 [Homo sapiens]
gi|119586571|gb|EAW66167.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|119586572|gb|EAW66168.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|387539310|gb|AFJ70282.1| polyadenylate-binding protein 2 [Macaca mulatta]
Length = 306
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 172 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 228
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 229 SLALDESLFRGRQIKVIPKRT 249
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 164 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 222
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 223 KESVRTSLALDESLFRGRQIKVIPKRT 249
>gi|281353092|gb|EFB28676.1| hypothetical protein PANDA_022375 [Ailuropoda melanoleuca]
Length = 152
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 226
++ E R++YV ++D T E+L F CG V + C + G P FA++EF+
Sbjct: 23 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 79
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
D+E R +L+L ++ ++V+P +T
Sbjct: 80 DKESVRTSLALDESLFRGRQIKVIPKRT 107
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 22 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 80
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 81 KESVRTSLALDESLFRGRQIKVIPKRT 107
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 15/193 (7%)
Query: 151 RRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 210
+ KR G ++ +T +A D + ++V + V ++ L F G+V+ R+
Sbjct: 376 KNKRKGDTEDGSAKKAKTDDASGD---IKNLFVGGLSWNVDDDWLKKEFEKFGEVISARV 432
Query: 211 CGDPNSVLR--FAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
+ + F +V+F E AR A+ ++AGT + + V +A P P RS
Sbjct: 433 ITERGTERSKGFGYVDFASPEDARKAVEAMAGTEIDGRTINV--DFSAPKPERPPQEKRS 490
Query: 268 EDEREMC--SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI---AFVE 322
+ E+ + T++ N+ TQ + F S G++ +RL D + + RI +VE
Sbjct: 491 FGQEELSAPTTTLFIGNLPFSATQDSVYEAF-SEYGDINSVRLPTDPE-TERIKGFGYVE 548
Query: 323 FAMAESAIAALNC 335
FA E+A AA+N
Sbjct: 549 FATQEAATAAVNV 561
>gi|293336608|ref|NP_001168401.1| uncharacterized protein LOC100382170 [Zea mays]
gi|223948043|gb|ACN28105.1| unknown [Zea mays]
gi|414585352|tpg|DAA35923.1| TPA: hypothetical protein ZEAMMB73_028165 [Zea mays]
Length = 432
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 15/200 (7%)
Query: 163 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGDPNSVLR-- 219
R+N ++ ++D+ T++V D+ VT+ L F + V ++ D ++
Sbjct: 166 RLNWASAGEKRDDTPEYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVTDKLTMRTKG 225
Query: 220 FAFVEFTDE-EGARAALSLAGTMLGFYPVRVLP--SKTAIAPVNPTFLPRS---EDEREM 273
+ FV+F D E ARA + G P+R+ P S+ V +P S + E +
Sbjct: 226 YGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNTGGVVQERVPNSQGAQSENDP 285
Query: 274 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESA-IAA 332
+ TI+ +D VT+ +K F S GEV +++ R FV+F SA A
Sbjct: 286 NNTTIFVGGLDPNVTEDTLKQVF-SPYGEVVHVKI----PVGKRCGFVQFVTRPSAEQAL 340
Query: 333 LNCSGAVLGSLPIRVSPSKT 352
L GA++G+ +R+S ++
Sbjct: 341 LMLQGALIGAQNVRLSWGRS 360
>gi|196010401|ref|XP_002115065.1| hypothetical protein TRIADDRAFT_28658 [Trichoplax adhaerens]
gi|190582448|gb|EDV22521.1| hypothetical protein TRIADDRAFT_28658 [Trichoplax adhaerens]
Length = 309
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 28/171 (16%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGA 231
+++ + + V+ + Q +T++++ +LF +CG+V+ C++ D NS L +AFV++ D A
Sbjct: 3 EKIDQSNLIVNYLPQSMTQDEIQSLFSSCGKVISCKLVRDKNSHHSLGYAFVKYEDVADA 62
Query: 232 RAAL-SLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
A+ SL G L ++V PS AI N +Y + +
Sbjct: 63 NKAISSLNGLRLQSKVIKVSYARPSSAAIKNAN-----------------LYVSGLPLHY 105
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAM---AESAIAALN 334
T D+ F G + ++L D +R + FV + AE+AI ALN
Sbjct: 106 THQDLDNLFGQY-GAIITSKVLYDGNGVSRGVGFVRYDKRNEAEAAILALN 155
>gi|328783360|ref|XP_001121000.2| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
mellifera]
Length = 592
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
VYV I ++ E+ + FL G + + DP + FAFVE+ E A+ AL +
Sbjct: 122 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 181
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G M+G ++V+ + + P + + +E + +R IY +I + +T+ DIK FE
Sbjct: 182 NGVMIGGRNIKVV-GRPSNMPQAQSVIDEITEESKHYNR-IYIASIHQDLTEDDIKSVFE 239
Query: 298 SVCGEVQRLRLL-GDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 353
+ G + +L G H + F+E+ ++A+ A+ LG +RV + TP
Sbjct: 240 AF-GPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITP 297
>gi|313214618|emb|CBY40937.1| unnamed protein product [Oikopleura dioica]
gi|313226203|emb|CBY21346.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++Y+ +D T E+L F CG + + C + G P FA++EFT++E A
Sbjct: 88 RSIYIGQVDYSSTAEELEQHFHGCGALNRVTIICDKYSGQPKG---FAYIEFTEKESVDA 144
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
A++L G+M ++V+P +T V+ T
Sbjct: 145 AIALDGSMFRDRQIKVMPKRTNKPGVSST 173
>gi|161078704|ref|NP_001097953.1| CG34354, isoform A [Drosophila melanogaster]
gi|158030423|gb|ABW08789.1| CG34354, isoform A [Drosophila melanogaster]
Length = 525
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 237
++V D+ ++ +QL F G++ DCR+ DP ++ + FV F + A A++ +
Sbjct: 98 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 157
Query: 238 AGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT--- 288
G LG + R P+ A P ++ + T+YC I+ ++
Sbjct: 158 NGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 217
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 333
+I S G +Q +R+ D + AFV F+ E+A A+
Sbjct: 218 NEEILQKTFSPYGTIQEIRVFKDKGY----AFVRFSTKEAATHAI 258
>gi|226500040|ref|NP_001150056.1| LOC100283683 [Zea mays]
gi|195636346|gb|ACG37641.1| nucleolysin TIAR [Zea mays]
Length = 421
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 22/174 (12%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE-GARAALSL 237
R+VYV +I QVT+ L +F + G V C++ S F F+++ D A A LSL
Sbjct: 75 RSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKS--SFGFIDYYDRRYAALAILSL 132
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G L P++V + T+ PR + I+ ++ +VT + FF
Sbjct: 133 NGRQLYGQPIKVNWAYTST--------PREDTSGHF---NIFVGDLCPEVTDATLFAFFS 181
Query: 298 --SVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIR 346
S C + R++ D + S FV F + A +A+N +G LG+ IR
Sbjct: 182 GYSTCSDA---RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIR 232
>gi|294892363|ref|XP_002774026.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239879230|gb|EER05842.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 636
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 24/178 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR----FAFVEFTDEEGARAAL 235
++YV D+ VTE L +F G V R+C D SV R +A+V F + A AL
Sbjct: 35 SLYVGDLKPDVTEAMLYEVFNGVGPVASIRVCRD--SVTRRSLGYAYVNFHNVADAERAL 92
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
L + P+R + + +PT R+ + ++ N+DK + D K
Sbjct: 93 DT----LNYSPIRGKQCRIMWSHRDPTL-------RKAGNANVFVKNLDKTI---DNKAL 138
Query: 296 FE--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
++ S+ G + ++ D +R FV F ESA A+ +G ++G + V P
Sbjct: 139 YDTFSLFGNILSCKVATDDDGKSRGYGFVHFENDESAHKAITKLNGMMIGEKAVYVGP 196
>gi|71033649|ref|XP_766466.1| polyadenylate binding protein [Theileria parva strain Muguga]
gi|68353423|gb|EAN34183.1| polyadenylate binding protein, putative [Theileria parva]
Length = 661
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 26/179 (14%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR----FAFVEFTDEEGARAAL 235
++YV D+ VTE L +F T G V R+C D SV R +A+V + + A+ AL
Sbjct: 28 SLYVGDLKPDVTEAVLYEVFNTVGPVASIRVCRD--SVTRKSLGYAYVNYYSTQDAQEAL 85
Query: 236 -SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
+L + +P R++ S R R + I+ N+DK + D K
Sbjct: 86 ENLNYIEIKGHPTRIMWSN------------RDPSLRRSGAGNIFVKNLDKSI---DTKS 130
Query: 295 FFESVC--GEVQRLRLLGDYQ-HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSP 349
+++ G + ++ D S R FV + ESA A+ +G ++G + V+P
Sbjct: 131 LYDTFSHFGPILSCKVAVDASGASKRYGFVHYENEESAREAIEKVNGMLIGGKRVEVAP 189
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEE 229
AQ+D+ + +Y+ ++D +E L LF G + ++ D N+ R F FV FT+ +
Sbjct: 298 AQEDKRVTSNLYIKNLDDSFDDESLGELFKPFGTITSSKVMLDANNHSRGFGFVCFTNPQ 357
Query: 230 GARAALS 236
A A++
Sbjct: 358 EATKAIA 364
>gi|413947084|gb|AFW79733.1| hypothetical protein ZEAMMB73_180978 [Zea mays]
Length = 787
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE 229
A + + ++RTV +S++ +T + + LF CG+VVDC I + A+VE++ E
Sbjct: 332 KADEADALKRTVQISNLSPLLTVDYVKQLFGLCGKVVDCTITDSKH----IAYVEYSKPE 387
Query: 230 GARAALSLAGTMLGFYPVRV-----LPSK 253
A AAL +G P+ V LPSK
Sbjct: 388 EATAALEFNNKNVGGRPLNVEMAKSLPSK 416
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 269 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAES 328
DE + RT+ +N+ +T +K F +CG+V + D +H IA+VE++ E
Sbjct: 334 DEADALKRTVQISNLSPLLTVDYVKQLF-GLCGKVVDCTIT-DSKH---IAYVEYSKPEE 388
Query: 329 AIAALNCSGAVLGSLPIRVSPSKT 352
A AAL + +G P+ V +K+
Sbjct: 389 ATAALEFNNKNVGGRPLNVEMAKS 412
>gi|409083337|gb|EKM83694.1| hypothetical protein AGABI1DRAFT_110331 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 444
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 36/220 (16%)
Query: 163 RMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR- 219
R+N Q +D V+V D+ +V ++ LA F G + D R+ D NS
Sbjct: 89 RVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSR 148
Query: 220 -FAFVEFTDEEGARAAL-SLAGTMLGFYPVRV------------------LPSKT---AI 256
+ F+ F D+ A A+ ++ G LG +RV P+ + A
Sbjct: 149 GYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGAPAVQQSPRPAGSTGGAP 208
Query: 257 APVNPTFLPRSED----EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY 312
AP+N P S + + + T+Y N+ TQ D+ F+S+ G + +R+ D
Sbjct: 209 APINFQGGPLSYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQAD- 266
Query: 313 QHSTRIAFVEFAMAE-SAIAALNCSGAVLGSLPIRVSPSK 351
AFV+ E +A+A + G ++ PI+ S K
Sbjct: 267 ---RGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGK 303
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 175 EVIRRT-VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEG 230
E RR +YV ++ +VTE L +F G V +I D N L + FVE+ D
Sbjct: 11 EAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRS 70
Query: 231 ARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 289
A AL +L G + +R VN + + E ++ ++ +V
Sbjct: 71 AETALQTLNGRKIFDTEIR----------VNWAYQGQQNKEDTSGHYHVFVGDLSPEVND 120
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLP 344
+ F S G + R++ D +AF + AE AIA +N G LGS
Sbjct: 121 DVLAKAF-SAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMN--GEWLGSRA 177
Query: 345 IRVSPSK------TPVRPRAPRP 361
IRV+ + P ++PRP
Sbjct: 178 IRVNWANQKTQGGAPAVQQSPRP 200
>gi|401409932|ref|XP_003884414.1| putative splicing factor [Neospora caninum Liverpool]
gi|325118832|emb|CBZ54384.1| putative splicing factor [Neospora caninum Liverpool]
Length = 550
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 30/180 (16%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-----FAFVEFTDEEGARAA 234
T+Y+ ++D QV ++ L LF+ CG V R P L + FVEFT+E A A
Sbjct: 30 TLYIGNLDSQVDDDLLWELFVQCGPV---RTVSVPRDKLTGNHQGYGFVEFTNEVDADYA 86
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIK 293
L L M+ Y + +K+A +D R I+ N+D V + I
Sbjct: 87 LKLM-NMVKLYGKSLRLNKSA------------QDRRNFDVGANIFLGNLDPDVDEKTIY 133
Query: 294 LFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIRVS 348
F S G + +++ D + ++F F +++A+AA+N G + + PI VS
Sbjct: 134 DTF-STFGNILTAKIMRDPETGISRGFGFVSFDTFEASDAALAAMN--GQFICNRPIHVS 190
>gi|312375219|gb|EFR22634.1| hypothetical protein AND_14423 [Anopheles darlingi]
Length = 413
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 23/177 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T+YV +D + TE L LF+ G VV+ + D + + + FVEF EE A A+ +
Sbjct: 14 TIYVGGLDDKATETLLWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFLGEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y P+RV + S ++ + I+ N+D +V + +
Sbjct: 74 M-NMIKLYGKPIRVNKA--------------SAHQKSLDVGANIFIGNLDLEVDEKLLYD 118
Query: 295 FFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALNC-SGAVLGSLPIRVS 348
F + +Q +++ D + +S AF+ FA E++ AA++ +G L + PI VS
Sbjct: 119 TFSAFGVILQTPKIMRDPETGNSKGFAFINFASFEASDAAMDAMNGQYLCNRPISVS 175
>gi|83774819|dbj|BAE64942.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1037
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 18/183 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
T++V++ + E + LF G+++D R N+ RF +V+F E A +A L
Sbjct: 654 TLFVTNFPPEADENYIRGLFREYGEIIDVRFPSLKYNTHRRFCYVQFKTAEAAHSATKLD 713
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE---MCSRTIYCTNIDKKVTQGDIKLF 295
GT +G T A ++ P + +R R I+ +N+D K ++ D++
Sbjct: 714 GTTVG-------KGLTLTAKISD---PSRKQDRHGPIYEGREIHVSNVDFKASERDVQEL 763
Query: 296 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVLGS--LPIRVSPSKT 352
F S G V+ +RL ++ +V F+ E A AAL G S L +++S ++
Sbjct: 764 F-SKYGTVELVRLPRKVDGGSKGFGYVVFSNKEEATAALAMDGQEYRSRTLHVKISAPQS 822
Query: 353 PVR 355
R
Sbjct: 823 TKR 825
>gi|226505274|ref|NP_001145712.1| uncharacterized protein LOC100279216 [Zea mays]
gi|219884125|gb|ACL52437.1| unknown [Zea mays]
Length = 787
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
A + + ++RTV +S++ +T + + LF CG+VVDC I + A+VE++ E
Sbjct: 333 ADEADALKRTVQISNLSPLLTVDYVKQLFGLCGKVVDCTITDSKH----IAYVEYSKPEE 388
Query: 231 ARAALSLAGTMLGFYPVRV-----LPSK 253
A AAL +G P+ V LPSK
Sbjct: 389 ATAALEFNNKNVGGRPLNVEMAKSLPSK 416
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 269 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAES 328
DE + RT+ +N+ +T +K F +CG+V + D +H IA+VE++ E
Sbjct: 334 DEADALKRTVQISNLSPLLTVDYVKQLF-GLCGKVVDCTIT-DSKH---IAYVEYSKPEE 388
Query: 329 AIAALNCSGAVLGSLPIRVSPSKT 352
A AAL + +G P+ V +K+
Sbjct: 389 ATAALEFNNKNVGGRPLNVEMAKS 412
>gi|295674319|ref|XP_002797705.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280355|gb|EEH35921.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 822
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 55 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 114
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 115 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 162
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 163 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGML 206
>gi|414876768|tpg|DAA53899.1| TPA: hypothetical protein ZEAMMB73_403376 [Zea mays]
gi|414876769|tpg|DAA53900.1| TPA: hypothetical protein ZEAMMB73_403376 [Zea mays]
Length = 924
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 227
T+ A + + ++RTV +S++ +T + + LF CG+VVDC + + +VE++
Sbjct: 330 TNKADEADALKRTVQISNLSPLLTVDYIKQLFGFCGKVVDCVMT----DTKQIVYVEYSK 385
Query: 228 EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 265
E A AAL L +G P+ V +K A+ P LP
Sbjct: 386 PEEATAALELNSKSVGGRPLNVEMAK-ALPPKANNNLP 422
>gi|145349966|ref|XP_001419396.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579627|gb|ABO97689.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 516
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 25/201 (12%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 236
RTV+V+++ ++ E + F G+V D RI D N+ A+VEF D++ AL
Sbjct: 135 RTVFVTNLSTKLDERGIFKFFSKVGKVTDVRIIYDRNTPKSKGMAYVEFADKKFIHPALE 194
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--------------TIYCTN 282
L G L + V KT+ A N + ++++ + +
Sbjct: 195 LTGQELNGQAIAV---KTSEAEKNIAWEAEQAQKKKLGASYGQGVPYIASAGPCKLRVGG 251
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHST----RIAFVEFAMAESAIAALN-CSG 337
+ +++ D+K FE GE+ + ++ D AFV+F + + A+ AL+ +G
Sbjct: 252 LHLGLSEDDVKAVFEPF-GELDFISMIKDDDPGAAGKFASAFVQFKLTQHAMLALSQLNG 310
Query: 338 AVLGSLPIRVSPSKTPVRPRA 358
L +PIRVS + V+ A
Sbjct: 311 LELVGIPIRVSIASQGVQAAA 331
>gi|380016392|ref|XP_003692169.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Apis
florea]
Length = 592
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
VYV I ++ E+ + FL G + + DP + FAFVE+ E A+ AL +
Sbjct: 122 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 181
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G M+G ++V+ + + P + + +E + +R IY +I + +T+ DIK FE
Sbjct: 182 NGVMIGGRNIKVV-GRPSNMPQAQSVIDEITEESKHYNR-IYIASIHQDLTEDDIKSVFE 239
Query: 298 SVCGEVQRLRLL-GDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 353
+ G + +L G H + F+E+ ++A+ A+ LG +RV + TP
Sbjct: 240 AF-GPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITP 297
>gi|349942059|dbj|GAA29907.1| ELAV like protein 2/3/4 [Clonorchis sinensis]
Length = 645
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 29/192 (15%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDE-EGARAA 234
+ + ++ + +++E++ LF + G+V C++ + S L +AFV+F D + +A
Sbjct: 119 KTNLIINYLPPNMSQEEVRALFSSIGEVESCKLVREKTSGESLGYAFVKFYDPLDAGKAI 178
Query: 235 LSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
+L G L V+V PS AI N +Y + +K+TQ +
Sbjct: 179 KTLNGLRLQNKTVKVSLARPSSEAIKGAN-----------------LYICGLPRKMTQPE 221
Query: 292 IKLFFESVCGEVQRLRLLGDYQH--STRIAFVEF---AMAESAIAALNCSGAVLGSLPIR 346
++ F S CG + R+L D + S +AF+ + AE+AI LN S PI
Sbjct: 222 LEKLF-SACGHIITARILYDTKTGLSRGVAFIRYDQRTEAEAAIRKLNGYLPPGASEPIT 280
Query: 347 VSPSKTPVRPRA 358
V + +P RA
Sbjct: 281 VKFANSPSSNRA 292
>gi|154275140|ref|XP_001538421.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
gi|150414861|gb|EDN10223.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
Length = 732
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 163
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 164 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGML 207
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 11/182 (6%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGA 231
DE V+V + V + L + F +CG+VV R+ D +S F +VEF D E +
Sbjct: 188 DEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLESS 247
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE---DEREMCSRTIYCTNIDKKVT 288
A+ G+ + +RV + T P N R+ D++ + T++ ++ VT
Sbjct: 248 AKAIEKDGSEIDGRAIRVNYA-TQRKP-NEAAEKRARVFNDKQSPPAETLWIGSLSFSVT 305
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF--VEFAMAESAIAALNC-SGAVLGSLPI 345
+ + F G+VQ +RL D F V+F+ + A AAL +GA + I
Sbjct: 306 EDQVYEAF-GQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKAMNGAEIAGRAI 364
Query: 346 RV 347
RV
Sbjct: 365 RV 366
>gi|147856399|emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]
Length = 461
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 25/212 (11%)
Query: 147 HTTTRRK--RNGYSQGK-RRMNCRTSNAQQD---EVIRRTVYVSDIDQQVTEEQLATLFL 200
H RR+ R+G + K RR + + + E +RTV+ + + TE + F
Sbjct: 58 HEKDRRRSGRDGERESKGRRFKDKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFS 117
Query: 201 TCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAP 258
G+V D R+ D NS ++EF D A++L+G +L PV V PS+
Sbjct: 118 KAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGHLLHGQPVMVKPSEAEKNL 177
Query: 259 VNPTFL---------PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL 309
V P R +Y N+ +T+ ++ FE G V+ ++L
Sbjct: 178 VQSNASGAVSGGIAGPYG-----AVDRKLYVGNLHFNMTELQLRQIFEPF-GRVELVQLP 231
Query: 310 GDYQ--HSTRIAFVEFAMAESAIAALNCSGAV 339
D + FV+FA E A AA N +G +
Sbjct: 232 LDLETGQCKGFGFVQFAELEHAKAAQNLNGKL 263
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVE 322
P ++ ER+ RT++ + K T+ D+ FF S G+V+ +RL+ D + S + ++E
Sbjct: 87 PEADPERD--QRTVFAYQMPLKATERDVYEFF-SKAGKVRDVRLIMDRNSRRSKGVGYIE 143
Query: 323 FAMAESAIAALNCSGAVLGSLPIRVSPSKT 352
F A S A+ SG +L P+ V PS+
Sbjct: 144 FYDAMSVPMAIALSGHLLHGQPVMVKPSEA 173
>gi|432851905|ref|XP_004067100.1| PREDICTED: embryonic polyadenylate-binding protein 2-like [Oryzias
latipes]
Length = 259
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R+VYV ++D T ++L F CG V + C R G P FA++EF+D A++
Sbjct: 79 RSVYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKG---FAYIEFSDRSAAQS 135
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
A+ L TM ++VLP +T + ++ T
Sbjct: 136 AVGLHETMFRGRVLKVLPKRTNMPGISTT 164
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E+ + +R++Y N+D T ++++ F CG V R+ +L D H A++EF+
Sbjct: 71 EERMDADNRSVYVGNVDYGATADELEIHFNG-CGPVNRVTILCDRFSGHPKGFAYIEFSD 129
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
+A +A+ + ++V P +T
Sbjct: 130 RSAAQSAVGLHETMFRGRVLKVLPKRT 156
>gi|429863469|gb|ELA37920.1| nuclear and cytoplasmic polyadenylated rna-binding protein pub1
[Colletotrichum gloeosporioides Nara gc5]
Length = 479
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 232
E +R +YV +DQ+VTE+ L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 82 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAER 141
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 291
A +L G + +R VN + + + + + I+ ++ +V
Sbjct: 142 AMQTLNGRRVHQSEIR----------VNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEV 191
Query: 292 IKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF---AMAESAIAALNCSGAVLGSLPIR 346
+ F S G V R++ D + S FV F AE A+++++ G LGS IR
Sbjct: 192 LTQAF-SAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMD--GEWLGSRAIR 248
>gi|71993551|ref|NP_500666.2| Protein T08B6.5 [Caenorhabditis elegans]
gi|373220496|emb|CCD73994.1| Protein T08B6.5 [Caenorhabditis elegans]
Length = 177
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 253 KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD- 311
K A++ P +E++ + +R++Y N+D K T +I+ F +VCG+V R+ + D
Sbjct: 23 KQALSASKKYMAPTAEEQEKTDARSVYVGNVDWKSTVSEIEEHF-AVCGKVARVTIPKDK 81
Query: 312 ---YQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKT 352
YQ + AFVEF ES AL SG + + I V+ +T
Sbjct: 82 FTGYQKN--FAFVEFQKLESVQLALVLSGTMFRNRKIMVTLKRT 123
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEE 229
+Q++ R+VYV ++D + T ++ F CG+V I D + + FAFVEF E
Sbjct: 39 EQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLE 98
Query: 230 GARAALSLAGTML 242
+ AL L+GTM
Sbjct: 99 SVQLALVLSGTMF 111
>gi|430813480|emb|CCJ29191.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 597
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 16/165 (9%)
Query: 189 QVTEEQLATLFLTCGQVVDCRI-CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV 247
Q ++++ +F G V++ R NS RF +V+ E A A+LSL G M
Sbjct: 319 QRIKKKVILIFNEYGDVIEVRFPSLRYNSRRRFCYVQMKYPEQALASLSLHGQMF----- 373
Query: 248 RVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCTNIDKKVTQGDIKLFFESVCGEVQ 304
K VN + + ED +E S R I +NI + T+ D+ F S G ++
Sbjct: 374 ----EKKYKLIVNISDSSKKEDRKEASSSEGREIIISNISHESTENDLIDLF-SKYGTLE 428
Query: 305 RLRLLGDY--QHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
+RL+ D +H ++ ++ AE A++AL+ L S I V
Sbjct: 429 SVRLINDRNSKHHKGFCYIIYSTAEQALSALDADKQELHSNTISV 473
>gi|308807104|ref|XP_003080863.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116059324|emb|CAL55031.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 387
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 22/188 (11%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 236
RTV+V+++ ++ E + F G+V D RI D NS A+VEF+D + AL
Sbjct: 9 RTVFVTNLSTKLDERGIFKFFSKVGKVTDVRIIYDRNSTTSKGMAYVEFSDRKFIHPALE 68
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT---------------IYCT 281
G L + V KT+ A N + ++++ + +
Sbjct: 69 CTGMELHGNAISV---KTSEAEKNIAWEAEQAQKKKLGAAYGAAVYGAGGGAGPCKLRVG 125
Query: 282 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN-CSGAVL 340
+ +++ DIK FE G++ + +L + AFV+F A+ AL+ +G L
Sbjct: 126 GLHLALSEDDIKAVFEPF-GQLDFISMLKEDDGKYASAFVQFRQTSQAMLALSQLNGLEL 184
Query: 341 GSLPIRVS 348
+PIRVS
Sbjct: 185 VGIPIRVS 192
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR--IAFVEFAMAESAIAA 332
+RT++ TN+ K+ + I FF V G+V +R++ D +T +A+VEF+ + A
Sbjct: 8 TRTVFVTNLSTKLDERGIFKFFSKV-GKVTDVRIIYDRNSTTSKGMAYVEFSDRKFIHPA 66
Query: 333 LNCSGAVLGSLPIRVSPSK 351
L C+G L I V S+
Sbjct: 67 LECTGMELHGNAISVKTSE 85
>gi|169767236|ref|XP_001818089.1| RNA-binding protein rsd1 [Aspergillus oryzae RIB40]
gi|238484073|ref|XP_002373275.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|83765944|dbj|BAE56087.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701325|gb|EED57663.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|391870727|gb|EIT79903.1| transcriptional coactivator CAPER [Aspergillus oryzae 3.042]
Length = 568
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 15/190 (7%)
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFA 221
RT +DE RRT++V + ++ ++L F G Q+V R+ G V
Sbjct: 166 RTPELNEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---G 222
Query: 222 FVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 279
+VEF +E+ A+ L G L P+ ++ ++ NP S + +Y
Sbjct: 223 YVEFKNEDSVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNPD--ASSGNNHAAPFHRLY 280
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSG 337
NI +T+ D++ FE GE++ ++L D +R FV+F A AL +G
Sbjct: 281 VGNIHFSITENDLQNVFEPF-GELEFVQLQKDETGRSRGYGFVQFRDPNQAREALEKMNG 339
Query: 338 AVLGSLPIRV 347
L IRV
Sbjct: 340 FDLAGRAIRV 349
>gi|350411267|ref|XP_003489292.1| PREDICTED: protein sex-lethal-like [Bombus impatiens]
Length = 356
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGA 231
+E R + ++ + Q +TE+ L +LF+T G V CR+ D + F FV + E A
Sbjct: 80 NEEPRTNLIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDA 139
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+S T+ G ++V + ++ P+ E+ +Y TN+ + +T+
Sbjct: 140 ATAIS---TLNG---LQVQNKRLKVSFARPS-------GEEIKETNLYVTNLPRNITESQ 186
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF---AMAESAIAALNCSGAVLGSLPIRV 347
I F VQ+ L R +AFV F A+ AIA L+ + GS P+ V
Sbjct: 187 IDDIFSKYGNIVQKNILKDKLTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSV 246
>gi|427776813|gb|JAA53858.1| Putative rna-binding protein sart3 rrm superfamily [Rhipicephalus
pulchellus]
Length = 936
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 31/189 (16%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
RTV++S++ V E Q+ F G++ + R+ D + F ++ FT + AAL
Sbjct: 666 RTVFLSNLAYDVEESQIEEAFKEVGEIEELRLVRDYKGRSKGFGYLVFTHMQSVEAALKR 725
Query: 238 AGTMLGFYPVRVLPSKTAIAPVN--PTFLPRSEDEREMCSRT------IYCTNIDKKVTQ 289
T PVN P F+ + + + RT ++ I VT+
Sbjct: 726 DRT-----------------PVNGRPVFVSKCNERNQFRFRTGMEKNKLFVKGIPFSVTE 768
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIR 346
+++ F GE++ +RL+ Y+ HS IA+VE+A SA AL G +G ++
Sbjct: 769 KELEELF-GKYGELKGVRLV-TYRNGHSKGIAYVEYANETSATVALVQTDGMAMGDHTLQ 826
Query: 347 VSPSKTPVR 355
V+ S P R
Sbjct: 827 VAISNPPAR 835
>gi|413920411|gb|AFW60343.1| putative oligouridylate binding protein [Zea mays]
Length = 425
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 22/174 (12%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE-GARAALSL 237
R+VYV +I QVT+ L +F + G V C++ S F F+++ D A A LSL
Sbjct: 119 RSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKS--SFGFIDYYDRRYAALAILSL 176
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G L P++V + T+ PR + I+ ++ +VT + FF
Sbjct: 177 NGRQLYGQPIKVNWAYTST--------PREDTSGHF---NIFVGDLCPEVTDATLFAFFS 225
Query: 298 --SVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIR 346
S C + R++ D + S FV F + A +A+N +G LG+ IR
Sbjct: 226 GYSTCSDA---RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIR 276
>gi|413920410|gb|AFW60342.1| nucleolysin TIAR [Zea mays]
Length = 447
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 79/174 (45%), Gaps = 22/174 (12%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE-GARAALSL 237
R+VYV +I QVT+ L +F + G V C++ S F F+++ D A A LSL
Sbjct: 75 RSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKS--SFGFIDYYDRRYAALAILSL 132
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G L P++V + T+ PR + I+ ++ +VT + FF
Sbjct: 133 NGRQLYGQPIKVNWAYTST--------PREDTSGHF---NIFVGDLCPEVTDATLFAFFS 181
Query: 298 --SVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAALN-CSGAVLGSLPIR 346
S C + R++ D + S FV F + A +A+N +G LG+ IR
Sbjct: 182 GYSTCSDA---RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIR 232
>gi|345561329|gb|EGX44424.1| hypothetical protein AOL_s00193g6 [Arthrobotrys oligospora ATCC
24927]
Length = 744
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 74/174 (42%), Gaps = 23/174 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 122 CRIMWSQRDPALRKTGHGNVFIKNLDIAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 181
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE-----DEREMCS 275
FV + E A A+ ML + K + +P+ E DE +
Sbjct: 182 GFVHYETAEAATNAIKHVNGML------LNEKKVYVG----HHIPKKERQSKFDEMKANF 231
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHSTRIAFVEFAMAE 327
+Y NID +V+ + + FE+ G++ L GD S FV F+ E
Sbjct: 232 TNVYVKNIDPEVSDDEFRTLFENF-GQITSASLARDGDSGTSRGFGFVNFSSHE 284
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 18/173 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 52 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEE 111
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 112 LNYTLIKGRPCRIMWSQ------------RDPALRKTGHGNVFIKNLDIAIDNKALHDTF 159
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
+ G + ++ D +++ FV + AE+A A+ + +G +L + V
Sbjct: 160 -AAFGNILSCKVAQDENGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVYV 211
>gi|312374824|gb|EFR22303.1| hypothetical protein AND_15459 [Anopheles darlingi]
Length = 560
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 9/202 (4%)
Query: 151 RRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 210
RR R GY G R Q++ RTV+ + Q++ L F + G+V D R+
Sbjct: 179 RRGRGGY--GSYRDRTPGDEVSQEDRDARTVFCMQLSQRIRARDLEEFFSSVGKVRDVRL 236
Query: 211 --CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE 268
C A++EF D E AL L+G L P+ V ++ + P
Sbjct: 237 ITCNKTKRFKGIAYIEFKDPESVALALGLSGQRLLGIPISVQHTQAEKNRMANQPPPAPP 296
Query: 269 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMA 326
R +Y ++ +T+ ++ FE G++ ++L+ D S F+ F A
Sbjct: 297 KNPAGPMR-LYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMDTDTGRSKGYGFITFHNA 354
Query: 327 ESAIAAL-NCSGAVLGSLPIRV 347
+ A AL +G L P++V
Sbjct: 355 DDAKKALEQLNGFELAGRPMKV 376
>gi|115478330|ref|NP_001062760.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|49387841|dbj|BAD26506.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|49388840|dbj|BAD26030.1| putative plastid-specific ribosomal protein 2 precursor [Oryza
sativa Japonica Group]
gi|113630993|dbj|BAF24674.1| Os09g0279500 [Oryza sativa Japonica Group]
gi|215695254|dbj|BAG90445.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737768|dbj|BAG96898.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641205|gb|EEE69337.1| hypothetical protein OsJ_28655 [Oryza sativa Japonica Group]
Length = 245
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 86/188 (45%), Gaps = 24/188 (12%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGA 231
+EV R +YV +I + VT ++LA +F G V + D + RF FV + E A
Sbjct: 65 EEVAARKLYVGNIPRTVTNDELAAMFADHGTVERAEVMFDKYTGRSRRFGFVTMSTPEEA 124
Query: 232 RAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLP---RSEDEREMC----SRTIYCTNI 283
AA+ SL T +G ++V V +FLP RS E E +Y N+
Sbjct: 125 NAAIESLNETEVGGRKIKV--------NVTESFLPNIDRSAPEPEPVFVDSQYKVYVGNL 176
Query: 284 DKKVTQGDIKLFFESVCGEVQRL---RLLGDYQHSTRIAFVEFAMAESAIAALNC-SGAV 339
K VT +K FF S GEV R+ G + S FV F+ E AA++ + A
Sbjct: 177 AKSVTTEMLKNFF-SEKGEVLSATVSRIPGTAK-SKGYGFVTFSSEEEVQAAVSTFNNAE 234
Query: 340 LGSLPIRV 347
L PIRV
Sbjct: 235 LEGQPIRV 242
>gi|431907175|gb|ELK11241.1| Polyadenylate-binding protein 2 [Pteropus alecto]
Length = 208
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 74 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 130
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 131 SLALDESLFRGRQIKVIPKRT 151
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 66 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 124
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 125 KESVRTSLALDESLFRGRQIKVIPKRT 151
>gi|326505260|dbj|BAK03017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD-YQHSTRIAFVEFAM 325
+E + ++ +R++Y N+D T +++ F++ CG V R+ +L D + A+VEF
Sbjct: 75 AEAKEQVDARSVYVGNVDYACTPEEVQQHFQA-CGTVNRVTILTDKFGQPKGFAYVEFLE 133
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKTPVRPRAPRPP 362
E+ ALN + + L I+VSP +T V RPP
Sbjct: 134 QEAVQEALNLNESELHGRQIKVSPKRTNVPGMKQRPP 170
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 223
N T+ A+ ++V R+VYV ++D T E++ F CG V I D + FA+V
Sbjct: 71 NASTAEAK-EQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYV 129
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
EF ++E + AL+L + L ++V P +T +
Sbjct: 130 EFLEQEAVQEALNLNESELHGRQIKVSPKRTNV 162
>gi|320581683|gb|EFW95902.1| Poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 629
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 16/186 (8%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEF 225
T+ + Q+ ++YV ++D VTE L +F GQV R+C D S L +A+V F
Sbjct: 36 TAESTQNSETLASLYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYVNF 95
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
AL L + P++ + + +P+ R S I+ N+
Sbjct: 96 QSHADGEKALE----ELNYTPIKGKACRIMWSQRDPSL-------RRNGSGNIFIKNLHP 144
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSL 343
+ + F S G++ ++ D +++ FV + +ESA AA+ N +G +L
Sbjct: 145 AIDNKTLHDTF-SAFGKILSCKIATDENGNSKGFGFVHYEESESAKAAIENVNGMLLNDH 203
Query: 344 PIRVSP 349
+ V P
Sbjct: 204 EVYVGP 209
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 11/182 (6%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGA 231
DE V+V + V + L + F +CG+VV R+ D +S F +VEF D E +
Sbjct: 191 DEEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEFADLESS 250
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE---DEREMCSRTIYCTNIDKKVT 288
A+ G+ + +RV + T P N R+ D++ + T++ ++ VT
Sbjct: 251 AKAIEKDGSEIDGRAIRVNYA-TQRKP-NEAAEKRARVFNDKQSPPAETLWIGSLSFSVT 308
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF--VEFAMAESAIAALNC-SGAVLGSLPI 345
+ + F G+VQ +RL D F V+F+ + A AAL +GA + I
Sbjct: 309 EDQVYEAF-GQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDASAALKAMNGAEIAGRAI 367
Query: 346 RV 347
RV
Sbjct: 368 RV 369
>gi|402593376|gb|EJW87303.1| hypothetical protein WUBG_01785 [Wuchereria bancrofti]
Length = 375
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 31/168 (18%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
T+YV +D++VT+ L LF+ G VV + D +S F F+EF EE A A+ +
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y P++V + S E+ M ++ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIKVNKA--------------SAHEKNMDVGANVFVGNLDPEV---DEKL 115
Query: 295 FFES-----VCGEVQRLRLLGDYQHSTRIAFVEFAMAE---SAIAALN 334
F++ V +V ++ + +S AFV FA E SAI A+N
Sbjct: 116 LFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFASFEASDSAIEAMN 163
>gi|299755830|ref|XP_001828914.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|298411401|gb|EAU92921.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 433
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 88/217 (40%), Gaps = 33/217 (15%)
Query: 163 RMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR- 219
R+N Q +D V+V D+ +V +E L F G + D R+ D NS
Sbjct: 89 RVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSR 148
Query: 220 -FAFVEFTDEEGARAAL-SLAGTMLGFYPVRV--LPSKT----------------AIAPV 259
+ F+ F D+ A A+ ++ G LG +RV KT A APV
Sbjct: 149 GYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGAPGGGARPSAGGGAPAPV 208
Query: 260 N----PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 315
N P + + + T+Y N+ TQ D+ F+S+ G + +R+ D
Sbjct: 209 NFQGGPLTYEQVLAQTAPYNTTVYVGNLVPYTTQADLIPLFQSI-GYLSEIRMQAD---- 263
Query: 316 TRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRVSPSK 351
AFV+ E A A+ G ++ PI+ S K
Sbjct: 264 RGFAFVKLDTHEHAAQAIVQLQGQMVHGRPIKCSWGK 300
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 73/179 (40%), Gaps = 22/179 (12%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGARAA 234
R +YV ++ +VTE L +F G V +I D N L + FVE+ D A A
Sbjct: 15 RAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETA 74
Query: 235 L-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L +L G + +R VN + + E ++ ++ +V +
Sbjct: 75 LQTLNGRKIFDTEIR----------VNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDEVLG 124
Query: 294 LFFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
F S G + R++ D +AF + AE AIA +N G LGS IRV
Sbjct: 125 KAF-SAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMN--GEWLGSRAIRV 180
>gi|386766659|ref|NP_001163756.2| CG34354, isoform E [Drosophila melanogaster]
gi|386766661|ref|NP_001163755.2| CG34354, isoform D [Drosophila melanogaster]
gi|383292995|gb|ACZ95050.2| CG34354, isoform E [Drosophila melanogaster]
gi|383292996|gb|ACZ95049.2| CG34354, isoform D [Drosophila melanogaster]
Length = 431
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 16/165 (9%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 237
++V D+ ++ +QL F G++ DCR+ DP ++ + FV F + A A++ +
Sbjct: 98 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 157
Query: 238 AGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT--- 288
G LG + R P+ A P ++ + T+YC I+ ++
Sbjct: 158 NGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 217
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 333
+I S G +Q +R+ D + AFV F+ E+A A+
Sbjct: 218 NEEILQKTFSPYGTIQEIRVFKDKGY----AFVRFSTKEAATHAI 258
>gi|17505625|ref|NP_492504.1| Protein PABP-2 [Caenorhabditis elegans]
gi|3874370|emb|CAB02750.1| Protein PABP-2 [Caenorhabditis elegans]
Length = 205
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 226
++ E ++VYV ++D T E++ F CG V + C R G P FA+VEFT
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKG---FAYVEFT 127
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
++EG + AL++ ++L ++V P +T
Sbjct: 128 EKEGMQNALAMTDSLLRGRQIKVDPKRT 155
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFAM 325
E++ E ++++Y N+D T +I+ F CG V R+ + D H A+VEF
Sbjct: 70 EEKAEADAKSVYVGNVDYGATAEEIEQHFHG-CGSVSRVTIQCDRFSGHPKGFAYVEFTE 128
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT--PVRPRAPRPPL 363
E AL + ++L I+V P +T P RPP
Sbjct: 129 KEGMQNALAMTDSLLRGRQIKVDPKRTNKPGMSTTNRPPF 168
>gi|340729596|ref|XP_003403084.1| PREDICTED: protein sex-lethal-like [Bombus terrestris]
Length = 356
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 81/180 (45%), Gaps = 19/180 (10%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGA 231
+E R + ++ + Q +TE+ L +LF+T G V CR+ D + F FV + E A
Sbjct: 80 NEEPRTNLIINYLPQSMTEKDLYSLFVTIGPVESCRVMKDYKTGYSYGFGFVNYAKAEDA 139
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+S T+ G ++V + ++ P+ E+ +Y TN+ + +T+
Sbjct: 140 ATAIS---TLNG---LQVQNKRLKVSFARPS-------GEEIKETNLYVTNLPRNITESQ 186
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF---AMAESAIAALNCSGAVLGSLPIRV 347
I F VQ+ L R +AFV F A+ AIA L+ + GS P+ V
Sbjct: 187 IDDIFSKYGNIVQKNILKDKLTGLPRGVAFVRFDKREEAQEAIARLHGTIPEGGSEPLSV 246
>gi|326513006|dbj|BAK03410.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525779|dbj|BAJ88936.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 436
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 163 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGDPNSVLR-- 219
R+N ++ ++D+ T++V D+ VT+ L F + V ++ D ++
Sbjct: 165 RLNWASAGEKRDDTPDYTIFVGDLAADVTDYMLQETFRVHYPSVKGAKVVTDKMTMRSKG 224
Query: 220 FAFVEFTDE-EGARAALSLAGTMLGFYPVRVLPSK----TAI---APVNPTFLPRSEDER 271
+ FV+F D E ARA + G P+R+ P+ T + P+ T ++ +
Sbjct: 225 YGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAANRKTTGVQERVPIPNTNTQGAQSDN 284
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIA 331
+ + TI+ +D VT+ +K F + GEV +++ R FV++A SA
Sbjct: 285 DPNNTTIFVGGLDPNVTEDALKQVF-APYGEVVHVKI----PVGKRCGFVQYANRPSAEQ 339
Query: 332 ALN-CSGAVLGSLPIRVSPSKTP 353
AL G ++G +R+S ++P
Sbjct: 340 ALQLLQGTLVGGQNVRLSWGRSP 362
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 152 RKRNGYSQGKRRMNCRTSNAQQD-EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 210
RK G + N T AQ D + T++V +D VTE+ L +F G+VV +I
Sbjct: 261 RKTTGVQERVPIPNTNTQGAQSDNDPNNTTIFVGGLDPNVTEDALKQVFAPYGEVVHVKI 320
Query: 211 -CGDPNSVLRFAFVEFTDEEGARAALS-LAGTMLGFYPVRV 249
G R FV++ + A AL L GT++G VR+
Sbjct: 321 PVGK-----RCGFVQYANRPSAEQALQLLQGTLVGGQNVRL 356
>gi|326485177|gb|EGE09187.1| RNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 560
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 14/184 (7%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ ++L F G Q+V R+ G V +VEF +
Sbjct: 161 EDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKN 217
Query: 228 EEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
EE A+ L G L P+ ++ ++ NP + +++ + +Y NI
Sbjct: 218 EESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPD-AHSNNNQQSIPFHRLYVGNIHF 276
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSL 343
+T+ D++ FE GE+ ++L + ++ FV+F A AL +G L
Sbjct: 277 SITESDLQNVFEPF-GELDFVQLQREEAGRSKGYGFVQFRDPNQAREALEKMNGFDLAGR 335
Query: 344 PIRV 347
PIRV
Sbjct: 336 PIRV 339
>gi|291403571|ref|XP_002717950.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 366
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 232 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 288
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 289 SLALDESLFRGRQIKVIPKRT 309
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAM 325
E+ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 224 EERMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKFSGHPKGFAYIEFSD 282
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 283 KESVRTSLALDESLFRGRQIKVIPKRT 309
>gi|289724641|gb|ADD18299.1| poly-U binding splicing factor [Glossina morsitans morsitans]
Length = 611
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 14/181 (7%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
VYV I ++ E+ + FL G + + DP + FAFVE+ EGA+ AL +
Sbjct: 102 VYVGSISFELKEDTIRAAFLPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 161
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G ++G ++V + + P + ++E + +R IY +I +++ DIK FE
Sbjct: 162 NGALMGGRNIKV--GRPSNMPQAQQVIDEIQEEAKSFNR-IYVASIHPDLSEEDIKSVFE 218
Query: 298 SVCGEVQRLRLL-GDYQHSTR-IAFVEFAMAES---AIAALNCSGAVLGSLPIRVSPSKT 352
+ G + +L G H+ + F+E+A ++ AIA++N LG +RV S T
Sbjct: 219 AF-GPILYCKLAPGTSLHTHKGYGFIEYANKQAMDEAIASMNLFD--LGGQLLRVGRSIT 275
Query: 353 P 353
P
Sbjct: 276 P 276
>gi|325183868|emb|CCA18326.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325183943|emb|CCA18401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 429
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 32/219 (14%)
Query: 149 TTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVD 207
T R R + G RR+ D V +++V D+ +V++E L + F T V
Sbjct: 75 TIHRFRLNWGAGGRRI---------DTVEDHSIFVGDLAPEVSDELLLSTFSTRFSSVRG 125
Query: 208 CRICGDPNSVL--RFAFVEFTDEEGARAALSLAGTMLGFY----PVRVLPSKTAIA---- 257
++ DP + + F FV F D+ A AL TM G Y P+RV +
Sbjct: 126 AKVVIDPVTRMPKGFGFVRFGDKGEADQALQ---TMNGVYCSSRPMRVSVATDRTKTRGI 182
Query: 258 ---PVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQH 314
P++ T + E E + T++ +D T+ D++ F V GE+ +++
Sbjct: 183 MPPPISYTVVGTGNTEEEGANTTVFIGGLDPSTTEDDLRARF-GVIGEIMSVKV----PP 237
Query: 315 STRIAFVEFAMAESAIAALN-CSGAVLGSLPIRVSPSKT 352
FV++ ++A A+N +GA++ + +R + ++
Sbjct: 238 GRGCGFVQYVTKDAADVAINQMNGALINGVKVRCAWGRS 276
>gi|291245052|ref|XP_002742405.1| PREDICTED: MGC81970 protein-like isoform 2 [Saccoglossus
kowalevskii]
Length = 444
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 60/114 (52%), Gaps = 13/114 (11%)
Query: 242 LGFYPVRVL--PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 299
+GF + + PSK P P +ER+ +RT++C + +K+ D++ FF SV
Sbjct: 19 VGFLWIVIYYGPSKKKDLPDLPP------EERD--ARTVFCWQLSQKIRPRDMEEFFSSV 70
Query: 300 CGEVQRLRLLGDY--QHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
G V+ +RL+ D + S IA+VEF S AL SG L S+PI V S+
Sbjct: 71 -GIVRDVRLISDRNSRRSKGIAYVEFQDKNSVPLALGLSGQKLLSIPIMVQASQ 123
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 12/176 (6%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 236
RTV+ + Q++ + F + G V D R+ D NS A+VEF D+ AL
Sbjct: 47 RTVFCWQLSQKIRPRDMEEFFSSVGIVRDVRLISDRNSRRSKGIAYVEFQDKNSVPLALG 106
Query: 237 LAGTMLGFYPVRVLPSKTAI--APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L+G L P+ V S+ A N L + +Y ++ +T+ ++
Sbjct: 107 LSGQKLLSIPIMVQASQAEKNRAAQNSQNLQKGNS----GPMRLYVGSLHFNITEEMLRG 162
Query: 295 FFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
FE G++ ++L+ D + S F+ F AE A AL +G L P++V
Sbjct: 163 IFEPF-GKIDNIQLMKDNETGRSKGYGFITFHDAEDAKKALEQLNGFELAGRPMKV 217
>gi|307165845|gb|EFN60208.1| Polyadenylate-binding protein 1 [Camponotus floridanus]
Length = 635
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 79/183 (43%), Gaps = 25/183 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGASKGY 141
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIDKVNGML-------LNGKKVYVG---KFIPRKEREKELGEKAKLF 191
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR----IAFVEFAMAESAIA 331
+Y N + +T +K FE G + +++ +R +AF + AE A+
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKY-GTITSHKVMSKDDGKSRGFGFVAFEDPDAAEQAVL 250
Query: 332 ALN 334
LN
Sbjct: 251 ELN 253
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 21/167 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI---DNKAMY 116
Query: 297 E--SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAALNCSGAVL 340
+ S G + ++ D +++ FV F E+A +++ +L
Sbjct: 117 DTFSAFGNILSCKVAQDESGASKGYGFVHFETEEAANKSIDKVNGML 163
>gi|225557655|gb|EEH05941.1| polyadenylate-binding protein [Ajellomyces capsulatus G186AR]
gi|240278336|gb|EER41843.1| polyadenylate-binding protein [Ajellomyces capsulatus H143]
gi|325096361|gb|EGC49671.1| polyadenylate-binding protein [Ajellomyces capsulatus H88]
Length = 784
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 115
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 163
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 164 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGML 207
>gi|255554000|ref|XP_002518040.1| conserved hypothetical protein [Ricinus communis]
gi|223542636|gb|EEF44173.1| conserved hypothetical protein [Ricinus communis]
Length = 946
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
A +++ +++T+ VS++ +T +QL LF G VV+C I + FA++E++ E
Sbjct: 342 AGKEDTLKKTLQVSNLSPLLTVDQLKQLFSYFGSVVECSITDSKH----FAYIEYSKPEE 397
Query: 231 ARAALSLAGTMLGFYPVRV-----LPSKTAI-APVNPTFLP 265
A AAL+L +G P+ V LP K+ + + V + LP
Sbjct: 398 ATAALALNNMDVGGRPLNVEMAKSLPQKSLLNSSVASSSLP 438
>gi|406606068|emb|CCH42541.1| Polyadenylate-binding protein 1 [Wickerhamomyces ciferrii]
Length = 787
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 60/121 (49%), Gaps = 18/121 (14%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEF-TDEEGARAALS 236
T+YV D+DQ+VTE+ L++LF + ++C P + L + +V F +D + RA
Sbjct: 136 TLYVGDLDQKVTEKSLSSLFTKYESFLSAKLCYSPTTRLSLGYGYVNFSSDTDANRATED 195
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ +R++P ++ S ++ +N++ + + ++LF+
Sbjct: 196 LNYTLVANKEIRIMPYVKG-------------KDKSFMSTNVFVSNLNTR--ELTLRLFY 240
Query: 297 E 297
E
Sbjct: 241 E 241
>gi|291398067|ref|XP_002715414.1| PREDICTED: splicing factor 3b, subunit 4 [Oryctolagus cuniculus]
Length = 384
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 86/181 (47%), Gaps = 31/181 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
TVYV +D++V+E L LFL G VV+ + D + + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K + + ++ I+ N+D ++ D KL
Sbjct: 74 M-NMIKLYGKPIRV--NKAS-----------AHNKNLDVGANIFIGNLDPEI---DEKLL 116
Query: 296 FES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIRV 347
+++ V + ++ D +S AF+ FA +++AI A+N G L + PI V
Sbjct: 117 YDTFSAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMN--GQYLCNRPITV 174
Query: 348 S 348
S
Sbjct: 175 S 175
>gi|258578315|ref|XP_002543339.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
gi|237903605|gb|EEP78006.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
Length = 582
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 81/181 (44%), Gaps = 8/181 (4%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEG 230
+DE +RTV+V + ++ ++L F G V D +I D S +VEF +EE
Sbjct: 189 EDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSKGVGYVEFKNEES 248
Query: 231 ARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
A+ L G L P+ + ++ A N S ++ + +Y NI +T
Sbjct: 249 VPVAIQLTGQKLLGIPIIAQFTEAEKNKAARNAEGHV-SGNQNSIPFHRLYVGNIHFSIT 307
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIR 346
+ D++ FE GE+ ++L D +R FV+F A AL +G L PIR
Sbjct: 308 ESDLQNVFEPF-GELDFVQLQKDENGRSRGYGFVQFRDPNQAREALEKMNGFDLAGRPIR 366
Query: 347 V 347
V
Sbjct: 367 V 367
>gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays]
Length = 341
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 77/182 (42%), Gaps = 24/182 (13%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALSL 237
++V ++ T E+LA +F G+V D +I D N FAFV T EE A+A
Sbjct: 114 LFVGNLPYTYTSEELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQMF 173
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC---------SRTIYCTNIDKKVT 288
G +LG R VN +PR + R + + IY N+ V
Sbjct: 174 DGALLGGRTAR----------VNYPEVPRGGERRTVTMSGRRRDDGTYKIYAGNLGWGVR 223
Query: 289 QGDIKLFFESVCGEVQ-RLRLLGDYQHSTRIAFVEFAMAESAIAAL-NCSGAVLGSLPIR 346
++ FE G + R+ + S FV F+ AE A AAL + G L P+R
Sbjct: 224 ADTLRNVFEGRAGLLDARVIFERETGRSRGFGFVSFSTAEDAQAALESLDGVELEGRPLR 283
Query: 347 VS 348
+S
Sbjct: 284 LS 285
>gi|414875768|tpg|DAA52899.1| TPA: hypothetical protein ZEAMMB73_898845 [Zea mays]
Length = 34
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 26/29 (89%)
Query: 332 ALNCSGAVLGSLPIRVSPSKTPVRPRAPR 360
ALNCSG +LG+LP+RVSPSKTPV+PR R
Sbjct: 2 ALNCSGMILGTLPVRVSPSKTPVKPRVNR 30
>gi|413956150|gb|AFW88799.1| hypothetical protein ZEAMMB73_294352 [Zea mays]
Length = 735
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 18/173 (10%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-SL 237
+YV D+ + V EE L F G V R+C D + LR+ +V + A AL L
Sbjct: 123 LYVGDLHEDVAEEHLFEAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVVALDKL 182
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
+++ P+RV+ S R D R I+ N+ V ++ F
Sbjct: 183 NHSLVLDKPIRVMWSN------------RDPDARRSGVGNIFVKNLSSSVDNASLQELF- 229
Query: 298 SVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRVS 348
S G+V ++ + ++R FV+F ESA A+ N +G++ + V+
Sbjct: 230 SKFGDVLSCKVAKNEDGTSRGYGFVQFTSQESADEAIGNLNGSLFNDRKLHVA 282
>gi|255074269|ref|XP_002500809.1| predicted protein [Micromonas sp. RCC299]
gi|226516072|gb|ACO62067.1| predicted protein [Micromonas sp. RCC299]
Length = 456
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
D + RTVY +++ +TE+ LA F G V + G + RF FVEF + A +
Sbjct: 235 DSDVSRTVYAGNVNSSITEDMLADFFSIAGNVTYVKFAGSEFNPSRFGFVEFDTKAAAES 294
Query: 234 ALSLAGTMLGFYPVRVLPSKTAI 256
A +L GT + ++V S I
Sbjct: 295 AKALTGTQVAEMTIKVKHSNNPI 317
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 274 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAAL 333
SRT+Y N++ +T+ + FF S+ G V ++ G + +R FVEF +A +A
Sbjct: 238 VSRTVYAGNVNSSITEDMLADFF-SIAGNVTYVKFAGSEFNPSRFGFVEFDTKAAAESAK 296
Query: 334 NCSGAVLGSLPIRVSPSKTPV 354
+G + + I+V S P+
Sbjct: 297 ALTGTQVAEMTIKVKHSNNPI 317
>gi|173421|gb|AAA35320.1| poly(A)-binding protein, partial [Schizosaccharomyces pombe]
Length = 628
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 18/173 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + G V R+C D + L +A+V F + E+G +A
Sbjct: 67 SLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDE 126
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+M + ++ N+D + + F
Sbjct: 127 LNYTLIKGRPCRIMWSQ------------RDPSLRKMGTGNVFIKNLDPAIDNKALHDTF 174
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
S G++ ++ D + + FV F ESA AA+ + +G +L + V
Sbjct: 175 -SAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYV 226
>gi|327287898|ref|XP_003228665.1| PREDICTED: polyadenylate-binding protein 2-like [Anolis
carolinensis]
Length = 196
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 61 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKG---FAYIEFSDKESVRT 117
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 118 SLALDESLFRGRQIKVIPKRT 138
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAM 325
E++ E +R+IY N+D T +++ F CG V R+ +L D H A++EF+
Sbjct: 53 EEKMEADARSIYVGNVDYGATAEELEAHFHG-CGSVNRVTILCDKYTGHPKGFAYIEFSD 111
Query: 326 AESAIAALNCSGAVLGSLPIRVSPSKT 352
ES +L ++ I+V P +T
Sbjct: 112 KESVRTSLALDESLFRGRQIKVIPKRT 138
>gi|167385948|ref|XP_001737551.1| 29 kDa ribonucleoprotein A, chloroplast precursor [Entamoeba dispar
SAW760]
gi|165899593|gb|EDR26160.1| 29 kDa ribonucleoprotein A, chloroplast precursor, putative
[Entamoeba dispar SAW760]
Length = 302
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLA 238
+V++ + + + E ++ F+TCG++ + PN + F+EF D++GA A S
Sbjct: 15 SVFIGKLPKSMKENEIREKFITCGRISRMMMQYYPNGQSKGCCFIEFEDKKGAERACSRD 74
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
G+++ +RV ++ VN LP+ ++ S I+ + T+ + F +
Sbjct: 75 GSIIDKQYIRVNMAEKKPKKVNYKHLPKVTQKKMNNSYCIFVGKVSAITTESTLVKIF-A 133
Query: 299 VCGEVQRLRLLGDYQHSTR--IAFVEFAMAESAIAALNCSGAVLGSLPIRV 347
CG+V R+ + + R A VEFA S AL + + I V
Sbjct: 134 KCGKVLRVTIPIWRNTNKRRGFAIVEFASLASVEKALELANTTVDGKQITV 184
>gi|157093141|gb|ABV22225.1| RNA recognition motif protein [Karlodinium micrum]
Length = 197
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV------VDCRICGDPNSVLRFAFVEFT 226
++EV +R+VY+ +D T E+L F +CGQ+ VD + G P FA+VEF
Sbjct: 55 REEVDKRSVYIGSVDYGSTPEELQEHFKSCGQINRITILVD-KYSGHPKG---FAYVEFA 110
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
DE+ + +L L G++ ++V+ +T + P FL
Sbjct: 111 DEQSVQNSLLLNGSLFRGRQLKVMQKRTNV----PGFL 144
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 269 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMA 326
D E+ R++Y ++D T +++ F+S CG++ R+ +L D H A+VEFA
Sbjct: 54 DREEVDKRSVYIGSVDYGSTPEELQEHFKS-CGQINRITILVDKYSGHPKGFAYVEFADE 112
Query: 327 ESAIAALNCSGAVLGSLPIRVSPSKTPV 354
+S +L +G++ ++V +T V
Sbjct: 113 QSVQNSLLLNGSLFRGRQLKVMQKRTNV 140
>gi|47834693|gb|AAT39000.1| AML1 [Aegilops speltoides]
Length = 869
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 17/174 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL-SL 237
RT++V +I+ V + +L +LF G D R F + + D AR A+ SL
Sbjct: 211 RTLFVRNINSNVEDSELRSLFEQFG---DIRTLYTATKHRGFVMISYFDIRAARGAMRSL 267
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L R L +I NP+ ++++ T+ N+D V+ +++ F
Sbjct: 268 QNKPLR---RRKLDIHFSIPKENPS-------DKDLNQGTLVIFNLDPSVSNEEVRQIF- 316
Query: 298 SVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
GEV+ +R + +H I F + AE+A+ +LN S + G I++ PS+
Sbjct: 317 GTYGEVKEIRETPNKKHHKFIEFYDVRAAEAALRSLNKS-EIAGKR-IKLEPSR 368
>gi|13357168|gb|AAK20025.1|AF234183_1 sex-lethal protein SXL1 [Lucilia cuprina]
Length = 324
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 73/159 (45%), Gaps = 21/159 (13%)
Query: 183 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF--AFVEFTDEEGARAAL-SLAG 239
V+ + Q +T+ +L LF TCG + CRI D + F AFV+F E A+ A+ SL G
Sbjct: 106 VNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSLNG 165
Query: 240 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 299
VR K + A P E ++ +Y TN+ + +T +++ F
Sbjct: 166 VT-----VRNKRLKVSYA------RPGGESIKDT---NLYVTNLPRTITDDELEKIFGKY 211
Query: 300 CGEVQRLRLLGDYQHSTR-IAFVEF---AMAESAIAALN 334
VQ+ L R +AFV F A+ AI+ALN
Sbjct: 212 GNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALN 250
>gi|392591591|gb|EIW80918.1| hypothetical protein CONPUDRAFT_103939 [Coniophora puteana
RWD-64-598 SS2]
Length = 1056
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 35/250 (14%)
Query: 81 ESFKDCEMRDLVDMLSK--LNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNF--IM 136
ES+ D +R++ +S+ +N + + L G IF+ + + T F +
Sbjct: 707 ESYDDARIREMFGQVSQCPMNEIRC-LMAFCLQYGTIFDVR---WPSKKYKSTRRFCYVQ 762
Query: 137 HTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQD------EVIRRTVYVSDIDQQV 190
+T A N N + R+++ SN ++ + + VYV+ + +
Sbjct: 763 YTAPAAAENALVL----HNFEVEPSRKLSVLISNPERKKERTDADANEKEVYVAGLSKYT 818
Query: 191 TEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPVRV 249
T+E L +F T G V D R+ D N + FAFVEF E A+AALS Y +R
Sbjct: 819 TKEDLKGVFKTYGTVNDVRLVTDKNGQSKGFAFVEFESETSAQAALSANN-----YELR- 872
Query: 250 LPSKTAIAPVNPTFLPRSEDER--------EMCSRTIYCTNIDKKVTQGDIKLFFESVCG 301
+ A+ + PR +D + E+ R++ N+ +G ++ E C
Sbjct: 873 -SRRIAVTLADSRVKPRYQDSKDTGLGRQAELQQRSVRIRNLPAGAQEGLLQQALEKYCV 931
Query: 302 EVQRLRLLGD 311
++R+ + D
Sbjct: 932 -IKRVEVFED 940
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Query: 195 LATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS- 252
L L G + D R S RF +V++T A AL L + V PS
Sbjct: 732 LMAFCLQYGTIFDVRWPSKKYKSTRRFCYVQYTAPAAAENALVL-------HNFEVEPSR 784
Query: 253 KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY 312
K ++ NP + + + + +Y + K T+ D+K F++ G V +RL+ D
Sbjct: 785 KLSVLISNPE-RKKERTDADANEKEVYVAGLSKYTTKEDLKGVFKTY-GTVNDVRLVTDK 842
Query: 313 Q-HSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPVRPR 357
S AFVEF SA AAL+ + L S I V+ + + V+PR
Sbjct: 843 NGQSKGFAFVEFESETSAQAALSANNYELRSRRIAVTLADSRVKPR 888
>gi|332022211|gb|EGI62526.1| Poly(U)-binding-splicing factor half pint [Acromyrmex echinatior]
Length = 609
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
VYV I ++ E+ + FL G + + DP + FAFVE+ E A+ AL +
Sbjct: 138 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 197
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G M+G ++V+ + + P + + +E + +R IY +I + +T+ DIK FE
Sbjct: 198 NGVMIGGRNIKVV-GRPSNMPQAQSVIDEITEESKHYNR-IYIASIHQDLTEDDIKSVFE 255
Query: 298 SVCGEVQRLRLL-GDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 353
+ G + +L G H + F+E+ ++A+ A+ LG +RV + TP
Sbjct: 256 AF-GPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITP 313
>gi|307135827|gb|ADN33699.1| RNA-binding protein [Cucumis melo subsp. melo]
Length = 968
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 79/179 (44%), Gaps = 27/179 (15%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDCRICGDPNSVLRFAFVEFTDEEGARAA 234
RT++V +I+ V + +L LF G + C+ G F + + D AR A
Sbjct: 249 RTLFVRNINSNVEDSELKVLFEQYGDIRTLYTACKHRG-------FVMISYYDIRAARNA 301
Query: 235 LSLAGTMLGFYPVR--VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
+ L P+R L +I NP+ E+++ T+ N++ V+ ++
Sbjct: 302 MK----ALQNKPLRRRKLDIHYSIPKDNPS-------EKDINQGTLVVFNLESSVSNEEL 350
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSK 351
+ F V GE++ +R H I F + AE+A+ ALN S + I++ PS+
Sbjct: 351 RQIF-GVYGEIKEIREAPHRSHHKFIEFYDIRAAEAALCALNLSD--IAGKQIKLEPSR 406
>gi|307177474|gb|EFN66601.1| Poly(U)-binding-splicing factor half pint [Camponotus floridanus]
Length = 510
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 237
VYV I ++ E+ + FL G + + DP + FAFVE+ E A+ AL +
Sbjct: 40 VYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPEAAQLALEQM 99
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G M+G ++V+ + + P + + +E + +R IY +I + +T+ DIK FE
Sbjct: 100 NGVMIGGRNIKVV-GRPSNMPQAQSVIDEITEESKHYNR-IYIASIHQDLTEDDIKSVFE 157
Query: 298 SVCGEVQRLRLL-GDYQHSTR-IAFVEFAMAESAIAALNCSGAV-LGSLPIRVSPSKTP 353
+ G + +L G H + F+E+ ++A+ A+ LG +RV + TP
Sbjct: 158 AF-GPITYCKLAQGSSPHRHKGYGFIEYETMQAALEAIASMNLFDLGGQYLRVGRAITP 215
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 13/193 (6%)
Query: 163 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR--ICGDPNSVLRF 220
R N +E RTV+V + Q++ L F + G+V D R +C
Sbjct: 127 RSNSPVEELSPEERDARTVFVMQLSQRIRARDLEEFFSSVGKVRDVRLIVCNKTRRFKGI 186
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRT 277
A++EF D E AL L+G L P+ V + K + P +P++
Sbjct: 187 AYIEFKDPESVTLALGLSGQKLLGVPIIVQHTQAEKNRMGNSMPNLMPKNMT----GPMR 242
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMAESAIAAL-N 334
+Y ++ +T+ ++ FE G++ ++L+ D + S F+ F E A AL
Sbjct: 243 LYVGSLHFNITEDMLRSIFEPF-GKIDNIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQ 301
Query: 335 CSGAVLGSLPIRV 347
+G L P++V
Sbjct: 302 LNGFELAGRPMKV 314
>gi|242011768|ref|XP_002426618.1| spliceosome associated protein, putative [Pediculus humanus
corporis]
gi|212510771|gb|EEB13880.1| spliceosome associated protein, putative [Pediculus humanus
corporis]
Length = 691
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T+YV +D +VTE + LF+ G VV+ + D + + + FVEF EE A A+ +
Sbjct: 14 TIYVGGLDDKVTEPLMWELFVQSGPVVNVHMPKDRVTQMHQGYGFVEFMGEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y P+RV + S ++ + I+ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIRVNKA--------------SAHQKNLDVGANIFIGNLDPEV---DEKL 115
Query: 295 FFES-----VCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAALNCSGAVLGSLPIR 346
F++ V + ++ D +S AF+ FA ++++I A+N G L + PI
Sbjct: 116 LFDTFSAFGVILQTPKIMRDPDSGNSKGFAFINFASFDASDASIEAMN--GQYLCNRPIS 173
Query: 347 VS 348
VS
Sbjct: 174 VS 175
>gi|19112586|ref|NP_595794.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe 972h-]
gi|74675955|sp|O14327.1|PAB2_SCHPO RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|2467274|emb|CAB16904.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe]
Length = 166
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
++VYV ++D VT E+L + F +CG V + C + G P FA++EF++
Sbjct: 55 QSVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKG---FAYIEFSEPSLVPN 111
Query: 234 ALSLAGTMLGFYPVRVLPSKTAI 256
AL L G+ML P++V P +T +
Sbjct: 112 ALLLNGSMLHERPLKVTPKRTNV 134
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 269 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAMA 326
D+ + ++++Y N+D VT +++ F S CG V R+ +L D H A++EF+
Sbjct: 48 DKESIDAQSVYVGNVDYSVTPEELQSHFAS-CGSVNRVTILCDKFTGHPKGFAYIEFSEP 106
Query: 327 ESAIAALNCSGAVLGSLPIRVSPSKTPV 354
AL +G++L P++V+P +T V
Sbjct: 107 SLVPNALLLNGSMLHERPLKVTPKRTNV 134
>gi|326474523|gb|EGD98532.1| polyadenylate-binding protein [Trichophyton tonsurans CBS 112818]
Length = 676
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 59 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 118
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ +P R+ ++ N+D + + F
Sbjct: 119 LNYTLIKGRPCRIMWSQR-----DPAL-------RKTGQGNVFIKNLDTAIDNKALHDTF 166
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D Y +S FV + AE+A A+ +L
Sbjct: 167 -AAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGML 210
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL 235
+YV +++Q VT+E+ LF G++ + D + F FV F+D E A AA+
Sbjct: 241 IYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAASAAV 297
>gi|307107787|gb|EFN56029.1| hypothetical protein CHLNCDRAFT_13079, partial [Chlorella
variabilis]
Length = 132
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Query: 256 IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 315
IAP P+ +++E + SR++Y N+D T ++++ F+S CG V R+ +L D +
Sbjct: 32 IAPGGPSVDAAAKEEAD--SRSVYVGNVDYSCTPEELQMHFQS-CGTVNRVTILTDKMGN 88
Query: 316 TR-IAFVEFAMAESAIAALNCSGAVLGSLPIRVSPSKTPV 354
+ A++EF A++ A G+ L + I+VSP +T V
Sbjct: 89 PKGFAYIEFLEADAVTNACLLDGSELRNRAIKVSPKRTNV 128
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC----GDPNSVLRFAFVEFT 226
A ++E R+VYV ++D T E+L F +CG V I G+P FA++EF
Sbjct: 42 AAKEEADSRSVYVGNVDYSCTPEELQMHFQSCGTVNRVTILTDKMGNPKG---FAYIEFL 98
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
+ + A L G+ L ++V P +T +
Sbjct: 99 EADAVTNACLLDGSELRNRAIKVSPKRTNV 128
>gi|297743165|emb|CBI36032.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 16/163 (9%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 232
E+ + +YV D+D +V+E +L +F G +V R+C D S L +A+V F A
Sbjct: 25 ELHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDAS 84
Query: 233 AALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
AL+ L T L P+R++ S P R+ ++ N+D +
Sbjct: 85 KALACLNHTKLMGKPMRIMWSHRDPLP------------RKTGLANLFVKNLDPSINSAS 132
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMAESAIAALN 334
++ F G + ++ + S FV+F +SA AALN
Sbjct: 133 LQDIFCKF-GNILSCKVAEENGKSKCFGFVQFDSDDSATAALN 174
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 20/190 (10%)
Query: 167 RTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAF 222
R + +D + R+T ++V ++D + L +F G ++ C++ + F F
Sbjct: 101 RIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVAEENGKSKCFGF 160
Query: 223 VEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCT 281
V+F ++ A AAL +L TML K R E E +Y
Sbjct: 161 VQFDSDDSATAALNALNDTMLD--------GKKLFVSKFVKKCERKEASEETKFTNVYVK 212
Query: 282 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAM---AESAIAALNCSG 337
N+ + +T+ I+ F S G+V + ++ D +R FV F A+ A+ ALN G
Sbjct: 213 NLGEDLTEDIIRDKF-SEFGKVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEALN--G 269
Query: 338 AVLGSLPIRV 347
A+LGS + V
Sbjct: 270 AMLGSKKLFV 279
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF-TDEEGARAALSLA 238
+YV ++D V +++L F +CGQ+ ++ + + + F FV F T EE +A +L
Sbjct: 311 LYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLN 370
Query: 239 GTML 242
GT+L
Sbjct: 371 GTLL 374
>gi|154269845|ref|XP_001535826.1| hypothetical protein HCAG_09244 [Ajellomyces capsulatus NAm1]
gi|150409464|gb|EDN04912.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 387
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 21/177 (11%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARAALS 236
+R +Y+ +D +VTE+ L +F T G V +I D NS L + FVE+ D A A+S
Sbjct: 91 KRALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAERAMS 150
Query: 237 -LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGDIKL 294
L G + +R VN + + ++ + + I+ ++ +V ++ L
Sbjct: 151 TLNGRRVHQSEIR----------VNWAYQSNNNNKEDTSNHFHIFVGDLSNEVND-EVLL 199
Query: 295 FFESVCGEVQRLRLLGDYQHSTR-----IAFVEFAMAESAIAALNCSGAVLGSLPIR 346
S G V R++ D + +AF E AE A+++++ G LGS IR
Sbjct: 200 QAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALSSMD--GEWLGSRAIR 254
>gi|400597582|gb|EJP65312.1| polyadenylate-binding protein [Beauveria bassiana ARSEF 2860]
Length = 736
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 24/180 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 126 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGSSKGY 185
Query: 221 AFVEFTDEEGARAALSLAGTML----GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + +E A+ A+ ML Y +P K R EM +
Sbjct: 186 GFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 234
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL 333
+Y NI +VT + + FE G+V + + +R FV F E+A A+
Sbjct: 235 FTNVYVKNISPEVTDDEFRELFER-HGDVTSSSIAREQDGKSRGFGFVNFTTHEAAAKAV 293
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 75/173 (43%), Gaps = 18/173 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + + +G +A
Sbjct: 56 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEE 115
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 116 LNYTLIKGRPCRIMWSQ------------RDPALRKTGQGNVFIKNLDVAIDNKALHDTF 163
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMAESAIAAL-NCSGAVLGSLPIRV 347
+ G + ++ D S++ FV + E+A A+ + +G +L + V
Sbjct: 164 -AAFGNILSCKVAQDENGSSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYV 215
>gi|332030569|gb|EGI70257.1| Polyadenylate-binding protein 1 [Acromyrmex echinatior]
Length = 657
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 23/182 (12%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + + +
Sbjct: 104 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVTQDESGASKGY 163
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML L K F+PR E ++E+ +
Sbjct: 164 GFVHFETEEAANKSIEKVNGML-------LNGKKVYVG---KFIPRKERQKELGEKAKLF 213
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA---MAESAIAA 332
+Y N + +T +K FE ++ D S FV F AE A+
Sbjct: 214 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPNSAEQAVLD 273
Query: 333 LN 334
LN
Sbjct: 274 LN 275
>gi|225678061|gb|EEH16345.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 755
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 17/165 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 55 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 114
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ ++ N+D + + F
Sbjct: 115 LNYTLIKGKPCRIMWSQ------------RDPALRKTGQGNVFIKNLDTAIDNKALHDTF 162
Query: 297 ESVCGEVQRLRLLGD-YQHSTRIAFVEFAMAESAIAALNCSGAVL 340
+ G + ++ D + +S FV + AE+A A+ +L
Sbjct: 163 -AAFGNILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGML 206
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,782,692,623
Number of Sequences: 23463169
Number of extensions: 248340525
Number of successful extensions: 952964
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 4597
Number of HSP's that attempted gapping in prelim test: 941314
Number of HSP's gapped (non-prelim): 12892
length of query: 364
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 220
effective length of database: 8,980,499,031
effective search space: 1975709786820
effective search space used: 1975709786820
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)