BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017901
(364 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
pdb|2VN8|B Chain B, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
Length = 375
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/353 (31%), Positives = 180/353 (50%), Gaps = 24/353 (6%)
Query: 31 AVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIF----E 85
A V+ ++G EVL N+ +P + PNEV+V+ A S+NP+D MRSGYG + +
Sbjct: 24 AWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRD 83
Query: 86 PL--------LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSE 137
PL PL LGRD+SG V G V+ G EV+ A+ P +GT +++ V+S
Sbjct: 84 PLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPPWK-QGTLSEFVVVSG 142
Query: 138 DELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE----GQRXXXXXXXXXXXXXXXQ 193
+E++ KP S+TH A+++P+ ALTAW A+ +++ G+R Q
Sbjct: 143 NEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQ 202
Query: 194 FSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKG--KFDAVLDTIGAPETE 251
A HV+A C + + V GA+ +DY S +E +K FD +LD +G TE
Sbjct: 203 VMKAWDAHVTAVCSQDASELVRKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGG-STE 261
Query: 252 RLGLNFLKR--GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYI 309
+FLK+ G Y+TL D G+A G+ + T V + + + G+ Y +
Sbjct: 262 TWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGM-LQTGVTVGSKALKHFWKGVHYRWA 320
Query: 310 YMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
+ A L++I L + GK++ +++TF ++V EA ++ GK V+
Sbjct: 321 FFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVIN 373
>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella
Burnetii
Length = 321
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 156/339 (46%), Gaps = 33/339 (9%)
Query: 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYG--RSIFEPL 87
+A+ +FG P+VL++ + P+ + N+ L++ A S+NP+D + R+G G +
Sbjct: 8 KAIQFDQFGPPKVLKL-VDTPTPEYRKNQXLIKVHAASLNPIDYKTRNGSGFVAKKLKNN 66
Query: 88 LPLILGRDISGEVAAVGASVRSLTVGQEVFGAL----HPTAVRGTYADYAVLSEDELTPK 143
LP LG D SGEV +G+ V ++ +G +V G HP YA+Y S D + K
Sbjct: 67 LPSGLGYDFSGEVIELGSDVNNVNIGDKVXGIAGFPDHPCC----YAEYVCASPDTIIQK 122
Query: 144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVS 203
++ A+++P A LTA +AL A + +G Q + G V
Sbjct: 123 LEKLSFLQAASLPTAGLTALQALN-QAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVI 181
Query: 204 ATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGH 263
T ++ + A GAEQ ++Y +D LAI DAV+D +G + ++ LK G
Sbjct: 182 TTASKRNHAFLKALGAEQCINYHEEDFLLAISTPVDAVIDLVGG-DVGIQSIDCLKETGC 240
Query: 264 YMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRR 323
+++ TA V+ + + ++G+ + + E L + +
Sbjct: 241 IVSVPTITAG---------------RVIEVAKQKHRRAFGLLKQF-----NIEELHYLGK 280
Query: 324 LSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
L KL+I + + F +++ AHE + + GK+V +
Sbjct: 281 LVSEDKLRIEISRIFQLSEAVTAHELLETGHVRGKLVFK 319
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 152/334 (45%), Gaps = 27/334 (8%)
Query: 24 LVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI 83
L T + A V+ GP VL + P P +VLV+ A NPLD ++R+G
Sbjct: 3 LTTPTXIAAVVEEANGPFVLR---KLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHA 59
Query: 84 FEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTA-VRGTYADYAVLSEDELTP 142
+PL P ILG D++G V AVG V S VG VFG ++GT+A +A + L
Sbjct: 60 QQPL-PAILGXDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLAS 118
Query: 143 KPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHV 202
KP ++T AS +P +TAW L A++ +GQ Q ++A G V
Sbjct: 119 KPAALTXRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARV 178
Query: 203 SATCGSKSIDRVLAAGA------EQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLN 256
AT ++ V GA + DY+++ A +G FD V DT+G P + +
Sbjct: 179 FATARGSDLEYVRDLGATPIDASREPEDYAAE--HTAGQG-FDLVYDTLGGPVLDA-SFS 234
Query: 257 FLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAE 316
+KR GH ++ G +G P++ + T ++ + + E
Sbjct: 235 AVKRFGHVVSCLG--------WGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHF---GE 283
Query: 317 GLEEIRRLSETGKLKIPVD-KTFHMTQVREAHEA 349
L E L +TGKL +D +TF + ++ A++A
Sbjct: 284 XLREADALVQTGKLAPRLDPRTFSIAEIGSAYDA 317
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 158/375 (42%), Gaps = 77/375 (20%)
Query: 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
RAVV+ GGPEVLEV ++ VP+ P EV VR +A ++N LD +R G + P LP
Sbjct: 2 RAVVMRARGGPEVLEVA-DLPVPEPGPKEVRVRLKAAALNHLDVWVRKG----VASPKLP 56
Query: 90 L--ILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAV---------------------- 125
L +LG D SG V AVG V G EV ++P
Sbjct: 57 LPHVLGADGSGVVDAVGPGVEGFAPGDEVV--INPGLSCGRCERCLAGEDNLCPRYQILG 114
Query: 126 ---RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXX 182
GTYA+Y VL E L PKP +++ +A+AIP LTAW+ + + G
Sbjct: 115 EHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMA 174
Query: 183 XXXXXXXXXXQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK----GK 237
Q + G V AT GS+ + R A GA++ V+Y+ D ++ GK
Sbjct: 175 AGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGK 234
Query: 238 -FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM 296
D V+D GA L F G T +G A+A
Sbjct: 235 GADKVVDHTGA-------LYF--EGVIKATANGGRIAIAG-------------------A 266
Query: 297 QTWYSYGIDYSYIYMR---------ADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAH 347
+ Y + +++++ R A L I R E GKLK V + + E H
Sbjct: 267 SSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLKPVVGQVLPLEAAAEGH 326
Query: 348 EAKDKRLIPGKVVLE 362
++R + GKVVL+
Sbjct: 327 RLLEERRVFGKVVLQ 341
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 103/198 (52%), Gaps = 8/198 (4%)
Query: 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
RAV + FGGPEVL++R ++ VP K ++VL++ A +NP++T +RSG Y R +PLL
Sbjct: 31 RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSR---KPLL 87
Query: 89 PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
P G D++G + AVG + + G VF + + + G YA+YA+ ++ + P +
Sbjct: 88 PYTPGSDVAGVIEAVGDNASAFKKGDRVFTS---STISGGYAEYALAADHTVYKLPEKLD 144
Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGS 208
+AI TA+RAL +A + G+ Q + A G + T G+
Sbjct: 145 FKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGT 204
Query: 209 KSIDR-VLAAGAEQAVDY 225
+ + VL GA + ++
Sbjct: 205 EEGQKIVLQNGAHEVFNH 222
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 153/366 (41%), Gaps = 36/366 (9%)
Query: 9 SANDYLVSPLRFVRFLVTTSCRAVVLPRFGGPEVLEV--RPNVEVPDLKPNEVLVRTRAV 66
S D L F + R V L FGGP+V + RP +P EVLVR A+
Sbjct: 9 SGVDLGTENLYFQSXSLPQEXRFVDLKSFGGPDVXVIGKRP---LPVAGEGEVLVRAEAI 65
Query: 67 SINPLDTRMRSGYGRSIFEPL--LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTA 124
+N D R G + P ILG ++SGE+ VG V VG +V G A
Sbjct: 66 GVNRPDIAQRQGS----YPPPKDASPILGLELSGEIVGVGPGVSGYAVGDKVCG----LA 117
Query: 125 VRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXX 184
G YA+Y +L ++ P P A+A+P T W L A ++EG+
Sbjct: 118 NGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQXAGLTEGESVLIHGGT 177
Query: 185 XXXXXXXXQFSVASGCHVSATCGS----KSIDRVLAAGAEQAVDYSSKDIELAIKGK--- 237
Q + A G V AT GS ++ +R+ GA++ ++Y S+D IK +
Sbjct: 178 SGIGTTAIQLARAFGAEVYATAGSTGKCEACERL---GAKRGINYRSEDFAAVIKAETGQ 234
Query: 238 -FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM 296
D +LD IGA ER + L + G + A+A+ L+ PI KR+
Sbjct: 235 GVDIILDXIGAAYFER-NIASLAKDGCLSIIAFLGGAVAEKVNLS---PIXV-----KRL 285
Query: 297 QTWYSYGIDYSYIYMRADAEG-LEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLI 355
S + RA + L E+ L E G + + K F V +AH ++
Sbjct: 286 TVTGSTXRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSH 345
Query: 356 PGKVVL 361
GKV L
Sbjct: 346 VGKVXL 351
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 147/337 (43%), Gaps = 31/337 (9%)
Query: 36 RFGGPEVLEVRPNVEVPDLKP--NEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILG 93
+ GGPEVL+ VE P NE+ V +A+ IN +DT +RSG P LP LG
Sbjct: 9 KHGGPEVLQA---VEFTPADPAENEIQVENKAIGINFIDTYIRSGL---YPPPSLPSGLG 62
Query: 94 RDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADAS 153
+ +G V+ VG+ V+ + G V ++ + G Y+ + D+ P +++ A+
Sbjct: 63 TEAAGIVSKVGSGVKHIKAGDRV---VYAQSALGAYSSVHNIIADKAAILPAAISFEQAA 119
Query: 154 AIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGS-KSID 212
A LT + L+ + ++ Q++ A G + T G+ +
Sbjct: 120 ASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ 179
Query: 213 RVLAAGAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
L AGA Q ++Y +D+ E+ K V D++G ER L+ L+R G ++
Sbjct: 180 SALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWER-SLDCLQRRGLMVSF 238
Query: 268 HGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD-AEGLEEIRRLSE 326
+ A+ G+ LG +L ++ + + YI R + E E+ L
Sbjct: 239 GNSSGAVT---GVNLG-------ILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIA 288
Query: 327 TGKLKIPV--DKTFHMTQVREAHEAKDKRLIPGKVVL 361
+G +K+ V + + + + AHE + R G +L
Sbjct: 289 SGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLL 325
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 145/349 (41%), Gaps = 23/349 (6%)
Query: 24 LVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI 83
L S AV + GGPE L V+ V P EVL++ A ++N D R G +
Sbjct: 18 LYFQSMLAVHFDKPGGPENLYVK-EVAKPSPGEGEVLLKVAASALNRADLMQRQG--QYD 74
Query: 84 FEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPK 143
P ILG + SG VA +G + + AL P G A Y + E L P
Sbjct: 75 PPPGASNILGLEASGHVAELGPGCQGHWKIGDTAMALLPG---GGQAQYVTVPEGLLMPI 131
Query: 144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVS 203
P +T A+AIP A LTA++ L + G Q + +G
Sbjct: 132 PEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPL 191
Query: 204 ATCGS-KSIDRVLAAGAEQAVDYSSKDIELA----IKGK-FDAVLDTIGAPETERLGLNF 257
T GS K + GA +Y +D A KG + +LD IG E+ +N
Sbjct: 192 VTAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEK-NVNC 250
Query: 258 LKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKK-RMQTWYSYGIDYSYIYMRADAE 316
L G ++ L+G D G P+ + +L K+ + T D Y M +A
Sbjct: 251 LALDGRWV-LYGLMGG-GDING-----PLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAF 303
Query: 317 GLEEIRRLSETGKLK-IPV-DKTFHMTQVREAHEAKDKRLIPGKVVLEF 363
+ + S G + +PV D+ + +T+++EAH+ + GK+VLE
Sbjct: 304 TEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLEL 352
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 143/342 (41%), Gaps = 23/342 (6%)
Query: 31 AVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPL 90
AV + GGPE L V+ V P EVL++ A ++N D R G + P
Sbjct: 9 AVHFDKPGGPENLYVK-EVAKPSPGEGEVLLKVAASALNRADLMQRQG--QYDPPPGASN 65
Query: 91 ILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHA 150
ILG + SG VA +G + + AL P G A Y + E L P P +T
Sbjct: 66 ILGLEASGHVAELGPGCQGHWKIGDTAMALLPG---GGQAQYVTVPEGLLMPIPEGLTLT 122
Query: 151 DASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGS-K 209
A+AIP A LTA++ L + G Q + +G T GS K
Sbjct: 123 QAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQK 182
Query: 210 SIDRVLAAGAEQAVDYSSKDIELA----IKGK-FDAVLDTIGAPETERLGLNFLKRGGHY 264
+ GA +Y +D A KG + +LD IG E+ +N L G +
Sbjct: 183 KLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEK-NVNCLALDGRW 241
Query: 265 MTLHGETAALADHYGLALGLPIATTVLLKK-RMQTWYSYGIDYSYIYMRADAEGLEEIRR 323
+ L+G D G P+ + +L K+ + T D Y M +A + +
Sbjct: 242 V-LYGLMGG-GDING-----PLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPH 294
Query: 324 LSETGKLK-IPV-DKTFHMTQVREAHEAKDKRLIPGKVVLEF 363
S G + +PV D+ + +T+++EAH+ + GK+VLE
Sbjct: 295 FSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLEL 336
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 95/216 (43%), Gaps = 15/216 (6%)
Query: 38 GGPEVLE-VRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDI 96
GGPEVLE V E P P V+VR +A+ +N +DT RSG + P LP LG +
Sbjct: 11 GGPEVLEYVDFEPEAPG--PQAVVVRNKAIGLNFIDTYYRSGLYPA---PFLPSGLGAEG 65
Query: 97 SGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIP 156
+G V AVG V VG V + T G Y++ VL E L SV+ A+A+
Sbjct: 66 AGVVEAVGDEVTRFKVGDRV---AYGTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALM 122
Query: 157 FAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGS-KSIDRVL 215
LT L+ ++ G+ Q++ A G + T S +
Sbjct: 123 LKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK 182
Query: 216 AAGAEQAVDYSSKDI-----ELAIKGKFDAVLDTIG 246
A GA + +DYS +D+ EL K V D +G
Sbjct: 183 ALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVG 218
>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed
With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa
pdb|3B70|A Chain A, Crystal Structure Of Aspergillus Terreus Trans-Acting
Lovastatin Polyketide Enoyl Reductase (Lovc) With Bound
Nadp
Length = 371
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 94/238 (39%), Gaps = 27/238 (11%)
Query: 52 PDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLT 111
P L ++V VR AV+INP DT+MR + LG D +G V AVG+ V +
Sbjct: 32 PMLPRDQVYVRVEAVAINPSDTKMRGQFATPW------AFLGTDYAGTVVAVGSDVTHIQ 85
Query: 112 VGQEVFGALHPTAVR----GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK 167
VG V+GA + R G ++ Y V P ++ A+A+P TA A+K
Sbjct: 86 VGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMK 145
Query: 168 C------------AARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVL 215
S+ Q SG ATC + D
Sbjct: 146 LLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAK 205
Query: 216 AAGAEQAVDYSSKDIELAI----KGKFDAVLDTIGAPETERLGLNFLKR-GGHYMTLH 268
+ GAE+ DY + ++ I K LD I E+ + R GGHY++L+
Sbjct: 206 SRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLN 263
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 135/340 (39%), Gaps = 51/340 (15%)
Query: 51 VPDLKPNEVLVRTRAVSINPLDTR-MRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS 109
VP+ ++++VRT AVS+N D + +G G + P +P D SG V AVG SV
Sbjct: 48 VPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVP---ASDXSGVVEAVGKSVTR 104
Query: 110 LTVGQ------------------------EVFGALHPTAVRGTYADYAVLSEDELTPKPV 145
G E G HP G ++Y VL E P
Sbjct: 105 FRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHP----GVLSEYVVLPEGWFVAAPK 160
Query: 146 SVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSAT 205
S+ A+AS +P A LTAW AL + G R Q + A+G V T
Sbjct: 161 SLDAAEASTLPCAGLTAWFALVEKGHLRAGDR-VVVQGTGGVALFGLQIAKATGAEVIVT 219
Query: 206 CGSKS-IDRVLAAGAEQAVDYSSKD-IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGH 263
S+ +DR A GA+ ++ +D +E D D I E G L +
Sbjct: 220 SSSREKLDRAFALGADHGINRLEEDWVERVYALTGDRGADHI----LEIAGGAGLGQSLK 275
Query: 264 YMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRR 323
+ G + + G + P+ +LLK + S G + RA + + + R
Sbjct: 276 AVAPDGRISVIGVLEGFEVSGPVG-PLLLKSPVVQGISVG------HRRALEDLVGAVDR 328
Query: 324 LSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363
L LK +D + T+V EA D+ GKVV+EF
Sbjct: 329 LG----LKPVIDXRYKFTEVPEALAHLDRGPF-GKVVIEF 363
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 103/241 (42%), Gaps = 19/241 (7%)
Query: 36 RFGGP-EVLEVR-PNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLLPLIL 92
+FG P +VL+V N+E LK NEV VR INP D +G Y I P +P
Sbjct: 12 KFGNPKDVLQVEYKNIE--PLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIP--- 66
Query: 93 GRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADA 152
G + G V VGA V +G+ V P GT+ +Y S D + P P S+ A
Sbjct: 67 GYEGVGIVENVGAFVSRELIGKRVL----PLRGEGTWQEYVKTSADFVVPIPDSIDDFTA 122
Query: 153 SAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFS-VASGCHVSATCGSKSI 211
+ + LTAW + Q S + + ++ T +K
Sbjct: 123 AQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHT 182
Query: 212 DRVLAAGAEQAVDYSSKDI-----ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMT 266
+ +L GA +D S+ + EL DA +D+IG P+ L + L+ GH++T
Sbjct: 183 EELLRLGAAYVIDTSTAPLYETVMELTNGIGADAAIDSIGGPDGNELAFS-LRPNGHFLT 241
Query: 267 L 267
+
Sbjct: 242 I 242
>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s
With Bound Nadp
Length = 371
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 93/238 (39%), Gaps = 27/238 (11%)
Query: 52 PDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLT 111
P L ++V VR AV+INP DT MR + LG D +G V AVG+ V +
Sbjct: 32 PMLPRDQVYVRVEAVAINPSDTSMRGQFATPW------AFLGTDYAGTVVAVGSDVTHIQ 85
Query: 112 VGQEVFGALHPTAVR----GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK 167
VG V+GA + R G ++ Y V P ++ A+A+P TA A+K
Sbjct: 86 VGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMK 145
Query: 168 C------------AARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVL 215
S+ Q SG ATC + D
Sbjct: 146 LLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATCSPHNFDLAK 205
Query: 216 AAGAEQAVDYSSKDIELAI----KGKFDAVLDTIGAPETERLGLNFLKR-GGHYMTLH 268
+ GAE+ DY + ++ I K LD I E+ + R GGHY++L+
Sbjct: 206 SRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLN 263
>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily
Protein (np_718042.1) From Shewanella Oneidensis At 1.55
A Resolution
Length = 315
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 69/121 (57%), Gaps = 6/121 (4%)
Query: 48 NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107
+V++P L +++LV+ +A+ INP+D + + +P G D +G + VGA V
Sbjct: 21 SVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVP---GVDGAGVIVKVGAKV 77
Query: 108 RSLTVGQEVFGALHPTAVR-GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL 166
S +G+ V A H + R G++A++ VL+ D + P +++ A+A+P LTAW+A
Sbjct: 78 DSKXLGRRV--AYHTSLKRHGSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAWQAF 135
Query: 167 K 167
+
Sbjct: 136 E 136
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 139/340 (40%), Gaps = 23/340 (6%)
Query: 31 AVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPL 90
A V+ + GGP+ V V+V P +V +R A+ +N LDT R+G + P+
Sbjct: 4 AAVIHKKGGPDNF-VWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPI 62
Query: 91 ILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDEL--TPKPVSVT 148
++G + + V VG V TVG+ V L P G Y+ + ++L PK + +
Sbjct: 63 VVGFEAAAVVEEVGPGVTDFTVGERVCTCLPPL---GAYSQERLYPAEKLIKVPKDLDLD 119
Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGS 208
+ + +TA L ++ G ++ G V T +
Sbjct: 120 DVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVST 179
Query: 209 -KSIDRVLAAGAEQAVDYSSKDIELAIK----GK-FDAVLDTIGAPETERLGLNFLKRGG 262
+ + G ++YS++D ++ GK D V D+IG +T + L+ L+ G
Sbjct: 180 EEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGK-DTLQKSLDCLRPRG 238
Query: 263 HYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADA-EGLEEI 321
+G + +AD PI L R + + + Y+ R++ EG + +
Sbjct: 239 -MCAAYGHASGVAD--------PIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCL 289
Query: 322 RRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
+ G L V KTF + + AH+ R G +VL
Sbjct: 290 FDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVL 329
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 142/348 (40%), Gaps = 41/348 (11%)
Query: 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
+ +++ GG +V++ + VP + E+L++ + +N +++ R G I+ P
Sbjct: 10 KVILIDEIGGYDVIKYE-DYPVPSISEEELLIKNKYTGVNYIESYFRKG----IYPCEKP 64
Query: 90 LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
+LGR+ SG V A G V + VG +V T+A Y+ +S K T
Sbjct: 65 YVLGREASGTVVAKGKGVTNFEVGDQV-----AYISNSTFAQYSKISSQGPVMKLPKGT- 118
Query: 150 ADASAIPFAA-----LTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSA 204
+D +AA LTA A + +G Q G H A
Sbjct: 119 SDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIA 178
Query: 205 TCGSKSIDRVLAA-GAEQAVDYSSKDIELAI----KGK-FDAVLDTIGAPETERLGLNFL 258
+ ++ GAE ++ S +DI + GK DA D++G +T + L L
Sbjct: 179 VASTDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGK-DTFEISLAAL 237
Query: 259 KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGL 318
KR G +++ G + L + + P T++ R Q Y YI AD E
Sbjct: 238 KRKGVFVSF-GNASGLIPPFSITRLSPKNITLV---RPQL-------YGYI---ADPEEW 283
Query: 319 ----EEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
+E L + KL I + KT+ + R A + R GK+VLE
Sbjct: 284 KYYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLE 331
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 15/213 (7%)
Query: 41 EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEV 100
E + + + VP ++LVR R V +N D +G +P P +G + GEV
Sbjct: 38 EAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP--PFDIGFEGIGEV 95
Query: 101 AAVGASVRS-LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAA 159
A+G S + TVGQ V + P G++A+Y V+ TP P + + +
Sbjct: 96 VALGLSASARYTVGQAV-AYMAP----GSFAEYTVVPASIATPVPS--VKPEYLTLLVSG 148
Query: 160 LTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAA-G 218
TA+ +LK +SEG++ Q S + CHV TC S L + G
Sbjct: 149 TTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLG 208
Query: 219 AEQAVDYSSKDIELAIKGKF----DAVLDTIGA 247
++ ++Y ++ + +K ++ D V +++G
Sbjct: 209 CDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG 241
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 15/213 (7%)
Query: 41 EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEV 100
E + + + VP ++LVR R V +N D +G +P P +G + GEV
Sbjct: 17 EAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP--PFDIGFEGIGEV 74
Query: 101 AAVGASVRS-LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAA 159
A+G S + TVGQ V + P G++A+Y V+ TP P + + +
Sbjct: 75 VALGLSASARYTVGQAV-AYMAP----GSFAEYTVVPASIATPVPS--VKPEYLTLLVSG 127
Query: 160 LTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAA-G 218
TA+ +LK +SEG++ Q S + CHV TC S L + G
Sbjct: 128 TTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLG 187
Query: 219 AEQAVDYSSKDIELAIKGKF----DAVLDTIGA 247
++ ++Y ++ + +K ++ D V +++G
Sbjct: 188 CDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG 220
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 15/213 (7%)
Query: 41 EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEV 100
E + + + VP ++LVR R V +N D +G +P P +G + GEV
Sbjct: 46 EAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKP--PFDIGFEGIGEV 103
Query: 101 AAVGASVRS-LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAA 159
A+G S + TVGQ V + P G++A+Y V+ TP P + + +
Sbjct: 104 VALGLSASARYTVGQAV-AYMAP----GSFAEYTVVPASIATPVPS--VKPEYLTLLVSG 156
Query: 160 LTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAA-G 218
TA+ +LK +SEG++ Q S + CHV TC S L + G
Sbjct: 157 TTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLG 216
Query: 219 AEQAVDYSSKDIELAIKGKF----DAVLDTIGA 247
++ ++Y ++ + +K ++ D V +++G
Sbjct: 217 CDRPINYKTEPVGTVLKQEYPEGVDVVYESVGG 249
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 66/120 (55%), Gaps = 8/120 (6%)
Query: 48 NVEVPDLKPNEVLVRTRAVSINPLDTRMR-SGYGRSIFEPLLPLILGRDISGEVAAVGAS 106
N+++P+ K +E+LV+ +++S+NP+DT+ R ++ P +LG D G V +VG
Sbjct: 24 NLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSKA------PRVLGFDAIGVVESVGNE 77
Query: 107 VRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL 166
V G V+ + P G+ A+Y +++E + P +++ A ++P +TA+ L
Sbjct: 78 VTMFNQGDIVYYSGSPDQ-NGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETL 136
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 105/250 (42%), Gaps = 27/250 (10%)
Query: 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
+A VL R GGP L P P+ + EV++R AV +N D MR G + P
Sbjct: 1 MKAWVLKRLGGPLELVDLPE---PEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHP-- 55
Query: 89 PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
P I G ++ G V + AL P +G A+ + + L P P ++
Sbjct: 56 PFIPGMEVVG------------VVEGRRYAALVP---QGGLAERVAVPKGALLPLPEGLS 100
Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHV-SATCG 207
+A+A P + LTA+ ALK A+ G++ Q + A G V +A
Sbjct: 101 PEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR 159
Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
+ + LA GAE+A Y+ G D VL+ G E LGL L GG + +
Sbjct: 160 PEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGL--LAHGGRLVYI 217
Query: 268 ---HGETAAL 274
GE A +
Sbjct: 218 GAAEGEVAPI 227
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 100/238 (42%), Gaps = 24/238 (10%)
Query: 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
+A VL R GGP L P P+ + EV++R AV +N D MR G + P
Sbjct: 1 MKAWVLKRLGGPLELVDLPE---PEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHP-- 55
Query: 89 PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
P I G ++ G V + AL P +G A+ + + L P P ++
Sbjct: 56 PFIPGMEVVG------------VVEGRRYAALVP---QGGLAERVAVPKGALLPLPEGLS 100
Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHV-SATCG 207
+A+A P + LTA+ ALK A+ G++ Q + A G V +A
Sbjct: 101 PEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASR 159
Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
+ + LA GAE+A Y+ G D VL+ G E LGL L GG +
Sbjct: 160 PEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGL--LAHGGRLV 215
>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
pdb|4DVJ|B Chain B, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
Length = 363
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 70/122 (57%), Gaps = 8/122 (6%)
Query: 48 NVEVPDLKP--NEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA 105
++E+P P +++LV +AVS+NP+D ++R + ++G D +G V+AVG
Sbjct: 42 DIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWK---VIGYDAAGIVSAVGP 98
Query: 106 SVRSLTVGQEVFGALHPTAVR-GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164
V G EVF A + +R GT A++ ++ E + KP ++ A+A+A+P ++TAW
Sbjct: 99 DVTLFRPGDEVFYA--GSIIRPGTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWE 156
Query: 165 AL 166
A
Sbjct: 157 AF 158
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 149/350 (42%), Gaps = 26/350 (7%)
Query: 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
RAVVL FGG L + +P+ + E+ +R +A +N +D +R G + P P
Sbjct: 5 RAVVLAGFGGLNKLRLFRKA-MPEPQDGELKIRVKACGLNFIDLMVRQGNIDN--PPKTP 61
Query: 90 LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTH 149
L+ G + SG V A+G SV+ +G V ++ A +A+ + + P ++
Sbjct: 62 LVPGFECSGIVEALGDSVKGYEIGDRVMAFVNYNA----WAEVVCTPVEFVYKIPDDMSF 117
Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQF-SVASGCHVSATCGS 208
++A+A P +TA+ L A + EG Q S V T +
Sbjct: 118 SEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAST 177
Query: 209 ---KSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYM 265
++I + ++ DY + ++ +G D VLD + T + GL+ LK G Y+
Sbjct: 178 FKHEAIKDSVTHLFDRNADYVQEVKRISAEG-VDIVLDCLCGDNTGK-GLSLLKPLGTYI 235
Query: 266 ------TLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGL- 318
+ GET + + + L + + + + + ++ + A GL
Sbjct: 236 LYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSL-LNLLFKQGRA-GLI 293
Query: 319 ----EEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD 364
E++ L K+K VD + + +V+EA + R GK++L+ +
Sbjct: 294 RGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVE 343
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 107/256 (41%), Gaps = 28/256 (10%)
Query: 30 RAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPL 87
RA+V G P +V+E++ N+E+ ++ ++V V+ A INP D M G YG P
Sbjct: 28 RALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYG---LLPE 83
Query: 88 LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV 147
LP + G + +V AVG++V L G V A A GT+ AV SE+ L P +
Sbjct: 84 LPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPA---NAGLGTWRTEAVFSEEALIQVPSDI 140
Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCG 207
A+ + TA+R L ++ G Q + A G
Sbjct: 141 PLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVR 200
Query: 208 -----SKSIDRVLAAGAEQAVDYSSKDIEL---AIKGKFDAV------LDTIGAPETERL 253
K DR+ + GAE + + EL +K F + L+ +G + L
Sbjct: 201 DRPDIQKLSDRLKSLGAEHVI----TEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTEL 256
Query: 254 GLNFLKRGGHYMTLHG 269
L L RGG +T G
Sbjct: 257 -LRQLARGGTMVTYGG 271
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 107/256 (41%), Gaps = 28/256 (10%)
Query: 30 RAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPL 87
RA+V G P +V+E++ N+E+ ++ ++V V+ A INP D M G YG P
Sbjct: 15 RALVYGHHGDPAKVVELK-NLELAAVRGSDVRVKMLAAPINPSDINMIQGNYG---LLPE 70
Query: 88 LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSV 147
LP + G + +V AVG++V L G V A A GT+ AV SE+ L P +
Sbjct: 71 LPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPA---NAGLGTWRTEAVFSEEALIQVPSDI 127
Query: 148 THADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCG 207
A+ + TA+R L ++ G Q + A G
Sbjct: 128 PLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVR 187
Query: 208 -----SKSIDRVLAAGAEQAVDYSSKDIEL---AIKGKFDAV------LDTIGAPETERL 253
K DR+ + GAE + + EL +K F + L+ +G + L
Sbjct: 188 DRPDIQKLSDRLKSLGAEHVI----TEEELRRPEMKNFFKDMPQPRLALNCVGGKSSTEL 243
Query: 254 GLNFLKRGGHYMTLHG 269
L L RGG +T G
Sbjct: 244 -LRQLARGGTMVTYGG 258
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 101/250 (40%), Gaps = 29/250 (11%)
Query: 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLL 88
+A VL R GGP L P P+ + EV++R AV +N D R G Y + P +
Sbjct: 2 KAWVLKRLGGPLELVDLPE---PEAEEGEVVLRVEAVGLNFADHLXRLGAYLTRLHPPFI 58
Query: 89 PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVT 148
P V + AL P +G A+ + + L P P ++
Sbjct: 59 P---------------GXEVVGVVEGRRYAALVP---QGGLAERVAVPKGALLPLPEGLS 100
Query: 149 HADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHV-SATCG 207
+A+A P + LTA+ ALK A+ G++ Q + A G V +A
Sbjct: 101 PEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAXGLRVLAAASR 159
Query: 208 SKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
+ + LA GAE+A Y+ G D VL+ G E LGL L GG + +
Sbjct: 160 PEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVRGKEVEESLGL--LAHGGRLVYI 217
Query: 268 ---HGETAAL 274
GE A +
Sbjct: 218 GAAEGEVAPI 227
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 147/364 (40%), Gaps = 57/364 (15%)
Query: 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
+A V+ +F P L+++ VE P + EVLVR +A + T + + +G +P LP
Sbjct: 2 KAAVVEQFKEP--LKIK-EVEKPTISYGEVLVRIKACGV--CHTDLHAAHGDWPVKPKLP 56
Query: 90 LILGRDISGEVAAVGASVRSLTVG---------------------QEVFGALHPTA---V 125
LI G + G V VG V L VG QE A V
Sbjct: 57 LIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSV 116
Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXX 185
G YA+Y + D + P +++ +A+ I A +T ++ALK ++
Sbjct: 117 DGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG--AKPGEWVAIYGIG 174
Query: 186 XXXXXXXQFSVASGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKD----IELAIKGKFDA 240
Q++ A G +V A G + ++ GA+ V+ +D ++ + G A
Sbjct: 175 GLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAA 234
Query: 241 VLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWY 300
V+ + P + N ++RGG L + +PI TVL +
Sbjct: 235 VVTAVSKPAFQS-AYNSIRRGG--------ACVLVGLPPEEMPIPIFDTVLNGIK----- 280
Query: 301 SYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVV 360
I S + R D L+E + + GK+K ++ + ++ E + K I G+VV
Sbjct: 281 ---IIGSIVGTRKD---LQEALQFAAEGKVKTIIE-VQPLEKINEVFDRMLKGQINGRVV 333
Query: 361 LEFD 364
L +
Sbjct: 334 LTLE 337
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 147/364 (40%), Gaps = 57/364 (15%)
Query: 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
+A V+ +F P L+++ VE P + EVLVR +A + T + + +G +P LP
Sbjct: 2 KAAVVEQFKEP--LKIK-EVEKPTISYGEVLVRIKACGV--CHTDLHAAHGDWPVKPKLP 56
Query: 90 LILGRDISGEVAAVGASVRSLTVG---------------------QEVFGALHPTA---V 125
LI G + G V VG V L VG QE A V
Sbjct: 57 LIPGHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSV 116
Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXX 185
G YA+Y + D + P +++ +A+ I A +T ++ALK ++
Sbjct: 117 DGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTG--AKPGEWVAIYGIG 174
Query: 186 XXXXXXXQFSVASGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKD----IELAIKGKFDA 240
Q++ A G +V A G + ++ GA+ V+ +D ++ + G A
Sbjct: 175 GFGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAA 234
Query: 241 VLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWY 300
V+ + P + N ++RGG L + +PI TVL +
Sbjct: 235 VVTAVSKPAFQS-AYNSIRRGG--------ACVLVGLPPEEMPIPIFDTVLNGIK----- 280
Query: 301 SYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVV 360
I S + R D L+E + + GK+K ++ + ++ E + K I G+VV
Sbjct: 281 ---IIGSIVGTRKD---LQEALQFAAEGKVKTIIE-VQPLEKINEVFDRMLKGQINGRVV 333
Query: 361 LEFD 364
L +
Sbjct: 334 LTLE 337
>pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|C Chain C, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|F Chain F, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 29/178 (16%)
Query: 22 RFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPD--LKPNEVLVRTRAVSINPLDTRMRSGY 79
+F + +AV+ + G P+ + + E+ D L PNEV+V+T INP D G
Sbjct: 19 QFRTMITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGV 78
Query: 80 ---------GRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-GTY 129
G EP P G + EV VG++V SL G V P+ V GT+
Sbjct: 79 YPSKPAKTTGFGTAEPAAP--CGNEGLFEVIKVGSNVSSLEAGDWVI----PSHVNFGTW 132
Query: 130 ADYAVLSEDEL-----------TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ 176
+A+ ++D+ KP +T + I LTA+ L +++ G+
Sbjct: 133 RTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGK 190
>pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|D Chain D, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|E Chain E, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 29/178 (16%)
Query: 22 RFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPD--LKPNEVLVRTRAVSINPLDTRMRSGY 79
+F + +AV+ + G P+ + + E+ D L PNEV+V+T +NP D G
Sbjct: 19 QFRTMITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGV 78
Query: 80 ---------GRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-GTY 129
G EP P G + EV VG++V SL G V P+ V GT+
Sbjct: 79 YPSKPAKTTGFGTTEPAAP--CGNEGLFEVIKVGSNVSSLEAGDWVI----PSHVNFGTW 132
Query: 130 ADYAVLSEDEL-----------TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ 176
+A+ ++D+ KP +T + I LTA+ L +++ G+
Sbjct: 133 RTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGK 190
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 67/171 (39%), Gaps = 48/171 (28%)
Query: 49 VEVPDLKPNEVLVRTRAVSIN----------PLDT-------RMRSGYGRSIFEPLLPLI 91
V +P+L P+EVLV A SIN P+ T + G+ +P +
Sbjct: 55 VPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYH--V 112
Query: 92 LGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR------------------------- 126
LG D SG V G VR G V +HP V
Sbjct: 113 LGSDCSGVVVRTGIGVRRWKPGDHVI--VHPAHVDEQEPATHGDGMLGTEQRAWGFETNF 170
Query: 127 GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKC--AARMSEG 175
G A+Y V+ +L PKP +T +A+ P A TA+R L A+M +G
Sbjct: 171 GGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQG 221
>pdb|1H0K|A Chain A, Enoyl Thioester Reductase 2
pdb|1H0K|B Chain B, Enoyl Thioester Reductase 2
Length = 364
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 28 SCRAVVLPRFGGPEVLEVRPNVEVPD--LKPNEVLVRTRAVSINPLDTRMRSGY------ 79
+ +AV+ + G P+ + + E+ D L PNEV+V+T INP D G
Sbjct: 3 TAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPA 62
Query: 80 ---GRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-GTYADYAVL 135
G EP P G + EV VG++V SL G V P+ V GT+ +A+
Sbjct: 63 KTTGFGTAEPAAP--CGNEGLFEVIKVGSNVSSLEAGDWVI----PSHVNFGTWRTHALG 116
Query: 136 SEDEL-----------TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ 176
++D+ KP +T + I LTA+ L +++ G+
Sbjct: 117 NDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGK 168
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 148/411 (36%), Gaps = 86/411 (20%)
Query: 20 FVRFLVTTSCRAVVLPR-----FGGPEVLEVRP-------NVEVPDLKPNEVLVRTRAVS 67
F + S RA+ + + F G E + P V VP+L P E LV A S
Sbjct: 40 FAALQLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDEVPVPELGPGEALVAVMASS 99
Query: 68 INPLDTRMRSGYGRSIFEP------------LLPL---------ILGRDISGEVAAVGAS 106
+N + SIFEP L PL I+G D++G V G
Sbjct: 100 VN------YNSVWTSIFEPVSTFAFLERYGKLSPLTKRHDLPYHIIGSDLAGVVLRTGPG 153
Query: 107 VRSLTVGQEVFGALHPTAVR-------------------------GTYADYAVLSEDELT 141
V + G EV H +V G A+ A++ ++L
Sbjct: 154 VNAWQPGDEVVA--HCLSVELESPDGHDDTMLDPEQRIWGFETNFGGLAEIALVKTNQLM 211
Query: 142 PKPVSVTHADASAIPFAALTAWRAL--KCAARMSEGQRXXXXXXXXXXXXXXXQFSVASG 199
PKP +T +A+A TA+R L + A M +G QF++A G
Sbjct: 212 PKPKHLTWEEAAAPGLVNSTAYRQLVSRNGAAMKQGDNVLIWGASGGLGSYATQFALAGG 271
Query: 200 CH-VSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFL 258
+ + + + + GAE +D +++ KF T E +R G
Sbjct: 272 ANPICVVSSPQKAEICRSMGAEAIIDRNAEGY------KFWKDEHTQDPKEWKRFGKRIR 325
Query: 259 K-RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR----- 312
+ GG + + E + +G ++ + + + Y + D Y++M
Sbjct: 326 ELTGGEDIDIVFEHPG-RETFGASVYVTRKGGTITTCASTSGYMHEYDNRYLWMSLKRII 384
Query: 313 ----ADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKV 359
A+ E RL GK+ + KT+ + + +A + L GKV
Sbjct: 385 GSHFANYREAYEANRLIAKGKIHPTLSKTYSLEETGQAAYDVHRNLHQGKV 435
>pdb|1GU7|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GU7|B Chain B, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GUF|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GUF|B Chain B, Enoyl Thioester Reductase From Candida Tropicalis
Length = 364
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 28 SCRAVVLPRFGGPEVLEVRPNVEVPD--LKPNEVLVRTRAVSINPLDTRMRSGY------ 79
+ +AV+ + G P+ + + E+ D L PNEV+V+T +NP D G
Sbjct: 3 TAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPA 62
Query: 80 ---GRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-GTYADYAVL 135
G EP P G + EV VG++V SL G V P+ V GT+ +A+
Sbjct: 63 KTTGFGTTEPAAP--CGNEGLFEVIKVGSNVSSLEAGDWVI----PSHVNFGTWRTHALG 116
Query: 136 SEDEL-----------TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ 176
++D+ KP +T + I LTA+ L +++ G+
Sbjct: 117 NDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGK 168
>pdb|1GYR|A Chain A, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
pdb|1GYR|B Chain B, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
pdb|1GYR|C Chain C, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
Length = 364
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 29/172 (16%)
Query: 28 SCRAVVLPRFGGPEVLEVRPNVEVPD--LKPNEVLVRTRAVSINPLDTRMRSGY------ 79
+ +AV+ + G P+ + + E+ D L PNEV+V+T +NP D G
Sbjct: 3 TAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVNPSKPA 62
Query: 80 ---GRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-GTYADYAVL 135
G EP P G + EV VG++V SL G V P+ V GT+ +A+
Sbjct: 63 KTTGFGTTEPAAP--CGNEGLFEVIKVGSNVSSLEAGDWVI----PSHVNFGTWRTHALG 116
Query: 136 SEDEL-----------TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQ 176
++D+ KP +T + I LTA+ L +++ G+
Sbjct: 117 NDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGK 168
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 138 DELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVA 197
D + P P ++ +A+ A LTAW +L R+S G+R +
Sbjct: 2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKM 61
Query: 198 SGCHVSATCGSKSIDRVLA------AGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE 251
G + T GS + +L+ G ++VD++ + +EL D VL+++ +
Sbjct: 62 IGARIYTTAGSDAKREMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQ 121
Query: 252 RLGLNFLKRGGHYMTL 267
R G+ L GG ++ L
Sbjct: 122 R-GVQILAPGGRFIEL 136
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 87/230 (37%), Gaps = 57/230 (24%)
Query: 48 NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPL-------------------- 87
+V VP+L P E LV A S+N + SIFEPL
Sbjct: 62 DVPVPELGPGEALVAVMASSVN------YNSVHTSIFEPLSTFGFLERYGRVSDLAKRHD 115
Query: 88 LPL-ILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR-------------------- 126
LP ++G D++G V G V + G EV H +V
Sbjct: 116 LPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVA--HCLSVELESSDGHNDTMLDPEQRIWG 173
Query: 127 -----GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL--KCAARMSEGQRXX 179
G A+ A++ ++L PKP ++ +A+A TA+R L + A M +G
Sbjct: 174 FETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVL 233
Query: 180 XXXXXXXXXXXXXQFSVASGCH-VSATCGSKSIDRVLAAGAEQAVDYSSK 228
QF++A G + + + + A GAE +D +++
Sbjct: 234 IWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAE 283
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 48 NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGR-SIFEPLLPLILGRDISGEVAAVGAS 106
N +P+ PNEVL+R +V I D YGR F P++LG + SG V VG+S
Sbjct: 23 NYPIPEPGPNEVLLRMHSVGICGSDVHYWE-YGRIGNFIVKKPMVLGHEASGTVEKVGSS 81
Query: 107 VRSLTVGQEVFGALHPTAVR 126
V+ L G V A+ P A R
Sbjct: 82 VKHLKPGDRV--AIEPGAPR 99
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 48 NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGR-SIFEPLLPLILGRDISGEVAAVGAS 106
N +P+ PNEVL+R +V I D YGR F P +LG + SG V VG+S
Sbjct: 23 NYPIPEPGPNEVLLRXHSVGICGSDVHYWE-YGRIGNFIVKKPXVLGHEASGTVEKVGSS 81
Query: 107 VRSLTVGQEVFGALHPTAVR 126
V+ L G V A+ P A R
Sbjct: 82 VKHLKPGDRV--AIEPGAPR 99
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 146/369 (39%), Gaps = 62/369 (16%)
Query: 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGR-SIFEPL 87
RA+ L G P LE ++ +P K ++VL++ A + D MR G +G I E L
Sbjct: 2 RAMRLVEIGKPLKLE---DIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 88 ---LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHP---------------------- 122
LP+ LG +I+G + VG V + G V A++P
Sbjct: 59 GVKLPVTLGHEIAGRIEEVGDEVVGYSKGDLV--AVNPWEGEGNCYYCRIGEEHLCDSPR 116
Query: 123 ---TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXX 179
G YA+Y ++ + K ++ +A+ + + +T +RA++ A + +
Sbjct: 117 WLGINYDGAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVR-KASLDPSKTLV 175
Query: 180 XXXXXXXXXXXXXQF--SVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD----IELA 233
Q +V+ + ++++ AGA+ ++ SS+D I
Sbjct: 176 VIGAGGGLGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRI 235
Query: 234 IKGK-FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLL 292
+GK DAV+D + +T + L + G Y+ + A L H L
Sbjct: 236 TQGKGADAVIDLNNSEKTLSIYPYVLAKQGKYVMVGLFGADLKYHAPLI----------- 284
Query: 293 KKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDK 352
T S + ++D G I L+E GK+K V KT + + EA + +
Sbjct: 285 -----TLNEVQFIGSLVGNQSDFLG---IMSLAEAGKVKPMVTKTMKLEEANEAIDNLEN 336
Query: 353 RLIPGKVVL 361
G+ VL
Sbjct: 337 FKAVGRQVL 345
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 68/162 (41%), Gaps = 29/162 (17%)
Query: 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
+A V+ +G P +E V+VP P +VLV+ A + T + + G +P LP
Sbjct: 8 KAAVVHAYGAPLRIE---EVKVPLPGPGQVLVKIEASGV--CHTDLHAAEGDWPVKPPLP 62
Query: 90 LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTA------------------------V 125
I G + G VAAVG+ V + G V TA V
Sbjct: 63 FIPGHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSV 122
Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK 167
G YA+Y + + + P +V A+ + I A +T ++ LK
Sbjct: 123 NGGYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGLK 164
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 48 NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGR-SIFEPLLPLILGRDISGEVAAVGAS 106
N +P+ PNEVL++ +V I D +GR F P++LG + SG V VG+
Sbjct: 22 NYPIPEPGPNEVLLKMHSVGICGSDVHYWQ-HGRIGDFVVKKPMVLGHEASGTVVKVGSL 80
Query: 107 VRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTP 142
VR L G V A+ P A R T ++ + L+P
Sbjct: 81 VRHLQPGDRV--AIQPGAPRQT-DEFCKIGRYNLSP 113
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 39 GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRM--RSGYGRSIFEPLLPLILGRDI 96
G E++EV +VP P EVL++ A SI D + + + +S +P P I+G ++
Sbjct: 16 GAELVEV----DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKP--PQIMGHEV 69
Query: 97 SGEVAAVGASVRSLTVGQEV 116
+GEV VG V L VG +
Sbjct: 70 AGEVVEVGPGVEDLQVGDYI 89
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 139/354 (39%), Gaps = 62/354 (17%)
Query: 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGR-SIFEPL 87
RAV L G P L+ + VP K +VL++ A + D MR G +G I E L
Sbjct: 2 RAVRLVEIGKPLSLQ---EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 88 ---LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHP---------------------- 122
LP+ LG +I+G++ VG V + G V A++P
Sbjct: 59 GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLV--AVNPWQGEGNCYYCRIGEEHLCDSPR 116
Query: 123 ---TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXX 179
G YA+Y ++ + K + +A+ + + +T +RA++ A + +
Sbjct: 117 WLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVR-KASLDPTKTLL 175
Query: 180 XXXXXXXXXXXXXQF--SVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK-- 235
Q +V+ + ++++ AGA+ ++ S +D I+
Sbjct: 176 VVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRI 235
Query: 236 ---GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLL 292
DAV+D + +T + L + G Y+ + A L H P+ T +
Sbjct: 236 TESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYH------APLITLSEI 289
Query: 293 KKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREA 346
+ S + ++D G I RL+E GK+K + KT + + EA
Sbjct: 290 Q----------FVGSLVGNQSDFLG---IMRLAEAGKVKPMITKTMKLEEANEA 330
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGR-SIFEPL 87
RAV L G P L+ + VP K +VL++ A + D MR G +G I E L
Sbjct: 2 RAVRLVEIGKPLSLQ---EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 88 ---LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKP 144
LP+ LG +I+G++ VG V + G V A++P G Y + E+ L P
Sbjct: 59 GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLV--AVNPLQGEGN-CYYCRIGEEHLCDSP 115
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGR-SIFEPL 87
RAV L G P L+ + VP K +VL++ A + D MR G +G I E L
Sbjct: 2 RAVRLVEIGKPLSLQ---EIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDL 58
Query: 88 ---LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKP 144
LP+ LG +I+G++ VG V + G V A++P G Y + E+ L P
Sbjct: 59 GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLV--AVNPWQGEGN-CYYCRIGEEHLCDSP 115
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 51 VPDLKPNEVLVRTRAVSINPLDTRMR--SGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108
VP+ P E+LVR A SI D + + R P PL+ G + SG V AVG VR
Sbjct: 20 VPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRP--PLVTGHEFSGVVEAVGPGVR 77
Query: 109 SLTVGQEV 116
VG V
Sbjct: 78 RPQVGDHV 85
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
C+A + + G P +E +EV K EV ++ A + P D +++F
Sbjct: 9 CKAAIAWKTGSPLCIE---EIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALF---- 61
Query: 89 PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR 126
P++LG + +G V +VG V + G +V P R
Sbjct: 62 PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKR 99
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 31/134 (23%)
Query: 39 GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRM--RSGYGRSIFEPLLPLILGRDI 96
G E++EV +VP P EVL++ A SI D + + + +S +P P I G ++
Sbjct: 15 GAELVEV----DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKP--PQIXGHEV 68
Query: 97 SGEVAAVGASVRSLTVGQEVFGALHPTAVR-----------------------GTYADYA 133
+GEV +G V + VG V H + G +A+YA
Sbjct: 69 AGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYA 128
Query: 134 VLSEDELTPKPVSV 147
V+ + P S+
Sbjct: 129 VVPAQNIWKNPKSI 142
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 31/134 (23%)
Query: 39 GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRM--RSGYGRSIFEPLLPLILGRDI 96
G E++EV +VP P EVL++ A SI D + + + +S +P P I G ++
Sbjct: 16 GAELVEV----DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKP--PQIXGHEV 69
Query: 97 SGEVAAVGASVRSLTVGQEVFGALHPTAVR-----------------------GTYADYA 133
+GEV +G V + VG V H + G +A+YA
Sbjct: 70 AGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYA 129
Query: 134 VLSEDELTPKPVSV 147
V+ + P S+
Sbjct: 130 VVPAQNIWKNPKSI 143
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 133/362 (36%), Gaps = 55/362 (15%)
Query: 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLP 89
+A V+ FG P ++ V VP P +V V+ A + T + + G +P LP
Sbjct: 4 KAAVVRAFGAPLTID---EVPVPQPGPGQVQVKIEASGV--CHTDLHAADGDWPVKPTLP 58
Query: 90 LILGRDISGEVAAVGASVRSLTVGQEVFGALHPTA------------------------V 125
I G + G V+AVG+ V + G V +A V
Sbjct: 59 FIPGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSV 118
Query: 126 RGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXX 185
G Y +Y V + + P V + + I A +T ++ LK GQ
Sbjct: 119 NGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGLK-VTDTRPGQ-WVVISGIG 176
Query: 186 XXXXXXXQFSVASGCHVSAT-CGSKSIDRVLAAGAEQAVDYSSKDIELAIK---GKFDAV 241
Q++ A G V+A ++ GAE AV+ D ++ G V
Sbjct: 177 GLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGV 236
Query: 242 LDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYS 301
L T +P+ + ++RGG T AL G PI VL ++
Sbjct: 237 LVTAVSPKAFSQAIGMVRRGG--------TIALNGLPPGDFGTPIFDVVLKGITIRG--- 285
Query: 302 YGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361
S + R+D L+E + G +K V T + V + + + G+VVL
Sbjct: 286 -----SIVGTRSD---LQESLDFAAHGDVKATV-STAKLDDVNDVFGRLREGKVEGRVVL 336
Query: 362 EF 363
+F
Sbjct: 337 DF 338
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 128/346 (36%), Gaps = 54/346 (15%)
Query: 48 NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107
++ VP K NE+L+ + + T + + +G LPL+ G + +G V +G +V
Sbjct: 22 DIPVPKPKANELLINVKYSGV--CHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENV 79
Query: 108 RSLTVGQ----------------------------EVFGALHPTAVRGTYADYAVLSEDE 139
+ +G ++ G H G++ YA +
Sbjct: 80 KGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTH----DGSFQQYATADAVQ 135
Query: 140 LTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASG 199
P A + I A +T ++ALK A M+ G Q++ A G
Sbjct: 136 AAHIPQGTDLAQVAPILCAGITVYKALKSANLMA-GHWVAISGAAGGLGSLAVQYAKAMG 194
Query: 200 CHVSATCGSKSIDRVL-AAGAEQAVDYS-SKDIELAIKGKFDAVLDTIGAPETERLGLNF 257
V G + + + + G E +D++ KDI A+ D + +
Sbjct: 195 YRVLGIDGGEGKEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEA 254
Query: 258 LKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADA-E 316
R Y+ +G T + +G+P Q S I SY+ RAD E
Sbjct: 255 STR---YVRANGTT--------VLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTRE 303
Query: 317 GLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362
L+ R G +K P+ K ++ + E +E +K I G+ V++
Sbjct: 304 ALDFFAR----GLVKSPI-KVVGLSTLPEIYEKMEKGQIVGRYVVD 344
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 11/120 (9%)
Query: 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGR-SIFEPL 87
RAV L G P L+ + VP K +VL++ A + D R G +G I E L
Sbjct: 2 RAVRLVEIGKPLSLQ---EIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDL 58
Query: 88 ---LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKP 144
LP+ LG +I+G++ VG V + G V A++P G Y + E+ L P
Sbjct: 59 GVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLV--AVNPWQGEGN-CYYCRIGEEHLCDSP 115
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
C+A VL P +E VEV K +EV ++ AV I D + SG ++ PL
Sbjct: 9 CKAAVLWELKKPFSIE---EVEVAPPKAHEVRIKMVAVGICGTDDHVVSG---TMVTPL- 61
Query: 89 PLILGRDISGEVAAVGASVRSLTVGQEVF 117
P+ILG + +G V +VG V ++ G +V
Sbjct: 62 PVILGHEAAGIVESVGEGVTTVKPGDKVI 90
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
C+A VL P +E +VEV K EV ++ AV I D + SG ++ PL
Sbjct: 9 CKAAVLWEVKKPFSIE---DVEVAPPKAYEVRIKMVAVGICHTDDHVVSG---NLVTPL- 61
Query: 89 PLILGRDISGEVAAVGASVRSLTVGQEVFGALHP 122
P+ILG + +G V +VG V ++ G +V P
Sbjct: 62 PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTP 95
>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
pdb|1H2B|B Chain B, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
Length = 359
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 34/181 (18%)
Query: 20 FVRFLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPN-EVLVRTRAVSINPLDTRMRSG 78
F + L +A L + P +E +V+ P L+ +V+VR + D + G
Sbjct: 7 FSQSLGVERLKAARLHEYNKPLRIE---DVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQG 63
Query: 79 YGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGT---------- 128
+ +P LP LG + G + V V L G V LHP GT
Sbjct: 64 MWHELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVI--LHPAVTDGTCLACRAGEDM 121
Query: 129 ---------------YADYAVLSEDELTPKPVSVTH---ADASAIPFAALTAWRALKCAA 170
+A++ S + P ++ + + + A +TA+RA+K AA
Sbjct: 122 HCENLEFPGLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAA 181
Query: 171 R 171
R
Sbjct: 182 R 182
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
C+A VL P +E +VEV K EV ++ AV I D + SG ++ PL
Sbjct: 9 CKAAVLWEVKKPFSIE---DVEVAPPKAYEVRIKMVAVGICGTDDHVVSG---NLVTPL- 61
Query: 89 PLILGRDISGEVAAVGASVRSLTVGQEVFGALHP 122
P+ILG + +G V +VG V ++ G +V P
Sbjct: 62 PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTP 95
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
C+A VL P +E +VEV K EV ++ AV I D + SG ++ PL
Sbjct: 9 CKAAVLWEVKKPFSIE---DVEVAPPKAYEVRIKMVAVGICRTDDHVVSG---NLVTPL- 61
Query: 89 PLILGRDISGEVAAVGASVRSLTVGQEVFGALHP 122
P+ILG + +G V +VG V ++ G +V P
Sbjct: 62 PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTP 95
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Query: 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
C+A VL P +E +VEV K EV ++ AV I D + SG ++ PL
Sbjct: 9 CKAAVLWEVKKPFSIE---DVEVAPPKAYEVRIKMVAVGICRTDDHVVSG---NLVTPL- 61
Query: 89 PLILGRDISGEVAAVGASVRSLTVGQEVFGALHP 122
P+ILG + +G V +VG V ++ G +V P
Sbjct: 62 PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTP 95
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 83/226 (36%), Gaps = 19/226 (8%)
Query: 47 PNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS 106
P P L EV + RA +N D + G + LG + +G V G
Sbjct: 230 PTATAP-LGDGEVRIAMRAAGVNFRDALIALGMYPGVAS------LGSEGAGVVVETGPG 282
Query: 107 VRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL 166
V L G V G + P A + AV +T P + A A+++P LTA+ AL
Sbjct: 283 VTGLAPGDRVMGMI-PKA----FGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYAL 337
Query: 167 KCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYS 226
A + G+ Q + G V AT S+ + + E
Sbjct: 338 VDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATA-SEDKWQAVELSREHLASSR 396
Query: 227 SKDIELAIKGK-----FDAVLDTIGAPETERLGLNFLKRGGHYMTL 267
+ D E G D VL+++ A E L L RGG ++ L
Sbjct: 397 TCDFEQQFLGATGGRGVDVVLNSL-AGEFADASLRMLPRGGRFLEL 441
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
C+A VL P +E VEV K +EV ++ A I D + SG ++ PL
Sbjct: 9 CKAAVLWELKKPFSIE---EVEVAPPKAHEVRIKMVAAGICRSDEHVVSG---NLVTPL- 61
Query: 89 PLILGRDISGEVAAVGASVRSLTVGQEVFGALHP 122
P+ILG + +G V +VG V ++ G +V P
Sbjct: 62 PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTP 95
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Query: 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
C+A + + G P +E +EV K EV ++ A + D +++F
Sbjct: 9 CKAAIAWKTGSPLCIE---EIEVSPPKACEVRIQVIATCVCHTDINATDPKKKALF---- 61
Query: 89 PLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR 126
P++LG + +G V +VG V + G +V P R
Sbjct: 62 PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKR 99
>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
pdb|1XA0|B Chain B, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
Length = 328
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 6/117 (5%)
Query: 48 NVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107
+ DL +VLVR S+N D G+ + P + G D++G V V +
Sbjct: 22 TISXDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIV--KTXPFVPGIDLAGVV--VSSQH 77
Query: 108 RSLTVGQEVFGALHPTAVR--GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTA 162
G EV + V G Y++YA L + L P P +T +A AI A TA
Sbjct: 78 PRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAXAIGTAGFTA 134
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 82/206 (39%), Gaps = 38/206 (18%)
Query: 75 MRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEV-----FGALHP------- 122
+++ +G S++ PL+ G +I GEV VG+ V+ + VG +V GA H
Sbjct: 61 IKNDWGFSMY----PLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCAND 116
Query: 123 -------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAW 163
T G Y+++ V +E + P ++ + + A +T +
Sbjct: 117 LENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVY 176
Query: 164 RALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVS--ATCGSKSIDRVLAAGAEQ 221
LK + E + +F+ A G V+ +T SK + + GA+
Sbjct: 177 SPLKYFG-LDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS 235
Query: 222 AVDYSSKDIELAIKGKFDAVLDTIGA 247
+ ++ A G D ++DT+ A
Sbjct: 236 FLVSRDQEQMQAAAGTLDGIIDTVSA 261
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 34.3 bits (77), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
C+A V G P +E +EV K +EV ++ A ++ D SG E
Sbjct: 8 CKAAVAWEAGKPLSIE---EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP---EGCF 61
Query: 89 PLILGRDISGEVAAVGASVRSLTVGQEVF 117
P+ILG + +G V +VG V L G V
Sbjct: 62 PVILGHEGAGIVESVGEGVTKLKAGDTVI 90
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
C+A V G P +E +EV K +EV ++ A ++ D SG E
Sbjct: 8 CKAAVAWEAGKPLSIE---EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP---EGCF 61
Query: 89 PLILGRDISGEVAAVGASVRSLTVGQEVF 117
P+ILG + +G V +VG V L G V
Sbjct: 62 PVILGHEGAGIVESVGEGVTKLKAGDTVI 90
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
C+A V G P +E +EV K +EV ++ A ++ D SG E
Sbjct: 7 CKAAVAWEAGKPLSIE---EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP---EGCF 60
Query: 89 PLILGRDISGEVAAVGASVRSLTVGQEVF 117
P+ILG + +G V +VG V L G V
Sbjct: 61 PVILGHEGAGIVESVGEGVTKLKAGDTVI 89
>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
pdb|4EYE|B Chain B, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
Length = 342
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 87/228 (38%), Gaps = 17/228 (7%)
Query: 28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPL 87
S +A+ GPE L V +VE P PN V+V +A + D M G + EP
Sbjct: 21 SMKAIQAQSLSGPEGL-VYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEP- 78
Query: 88 LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVR--GTYADYAVLSEDELTPKPV 145
P + G + +G VRS G + A G YA+ ++ + P P
Sbjct: 79 -PFVPGIETAG-------VVRSAPEGSGIKPGDRVMAFNFIGGYAERVAVAPSNILPTPP 130
Query: 146 SVTHADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSAT 205
+ A+A A+ T + A ++ G+ Q + G V A
Sbjct: 131 QLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAV 190
Query: 206 CG-SKSIDRVLAAGAEQAVDYS---SKDIELAIKGK-FDAVLDTIGAP 248
+ + + V + GA+ + +K + A G D V+D IG P
Sbjct: 191 VNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGP 238
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 57/143 (39%), Gaps = 30/143 (20%)
Query: 50 EVPDLKPNEVLVRTRAVSINPLDTRMRSG-YGRSIFEPLLPLILGRDISGEVAAVGASVR 108
E+ +KPNE L+ + D + +G YG +LG + G V +GA V
Sbjct: 20 ELRAIKPNEALLDMEYCGVCHTDLHVAAGDYGNK-----AGTVLGHEGIGIVKEIGADVS 74
Query: 109 SLTVGQEVF------GALHPT------------------AVRGTYADYAVLSEDELTPKP 144
SL VG V G H +V G A+ A++ D P
Sbjct: 75 SLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVP 134
Query: 145 VSVTHADASAIPFAALTAWRALK 167
+ +AS+I A +T ++A+K
Sbjct: 135 DGLDPIEASSITCAGVTTYKAIK 157
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGY-GRSIFEPLL 88
+A +L +F P +E +V +P+ + EVL+R + D R+ G + F L
Sbjct: 5 KAALLKKFSEPLSIE---DVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFR--L 59
Query: 89 PLILGRDISGEVAAVG 104
P+ILG + +G + VG
Sbjct: 60 PIILGHENAGTIVEVG 75
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 28/142 (19%)
Query: 50 EVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS 109
E+ +KPNE L+ + D + +G F +LG + G V +GA V S
Sbjct: 20 ELRAIKPNEALLDMEYCGVCHTDLHVAAGD----FGNKAGTVLGHEGIGIVKEIGADVSS 75
Query: 110 LTVGQEVF------GALHPT------------------AVRGTYADYAVLSEDELTPKPV 145
L VG V G H +V G A+ A++ D P
Sbjct: 76 LQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKVPD 135
Query: 146 SVTHADASAIPFAALTAWRALK 167
+ +AS+I A +T ++A+K
Sbjct: 136 GLDPIEASSITCAGVTTYKAIK 157
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 66/164 (40%), Gaps = 29/164 (17%)
Query: 28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPL 87
+ +A V+ FG P ++ V +P P ++ V +A + T + + G +P
Sbjct: 25 TMKAAVVRAFGKPLTID---EVPIPQPGPGQIQVAIQASGV--CHTDLHAAEGDWPVKPN 79
Query: 88 LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTA----------------------- 124
P I G + G V+AVG+ V+ + G V TA
Sbjct: 80 PPFIPGHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCEEQLNTGY 139
Query: 125 -VRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK 167
V G +A+Y V + + P ++ + + + A +T ++ LK
Sbjct: 140 SVNGGFAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTVYKGLK 183
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 49/120 (40%), Gaps = 9/120 (7%)
Query: 50 EVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPL--LPLILGRDISGEVAAVGASV 107
E+P EV V+ + I D+ + G+ P P ++G + G + AVG V
Sbjct: 38 EIPTPSAGEVRVKVKLAGICGSDSHIYRGH-----NPFAKYPRVIGHEFFGVIDAVGEGV 92
Query: 108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK 167
S VG+ V A+ P G ++ + T V HAD +A + A A K
Sbjct: 93 ESARVGERV--AVDPVVSCGHCYPCSIGKPNVCTTLAVLGVHADGGFSEYAVVPAKNAWK 150
>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1Y9E|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
Length = 330
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 49/116 (42%), Gaps = 6/116 (5%)
Query: 49 VEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108
+ DL + VL++ IN D G + E PLILG D +G V V ++
Sbjct: 24 ISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVRE--YPLILGIDAAGTV--VSSNDP 79
Query: 109 SLTVGQEVFGALHPTAVR--GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTA 162
G EV + V G ++YA + D L P P +++ +A A TA
Sbjct: 80 RFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAXVYGTAGFTA 135
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
C+A V G P +E +EV K +EV ++ A ++ D SG E
Sbjct: 7 CKAAVAWEAGKPLSIE---EIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP---EGCF 60
Query: 89 PLILGRDISGEVAAVGASVRSLTVGQEVF 117
P+ILG +G V +VG V L G V
Sbjct: 61 PVILGHLGAGIVESVGEGVTKLKAGDTVI 89
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 31.6 bits (70), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPL 87
+C+A V P V+E +V+V + EV ++ ++ D SG E L
Sbjct: 8 TCKAAVAYEPNKPLVIE---DVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDP---EGL 61
Query: 88 LPLILGRDISGEVAAVGASVRSLTVGQEVF 117
P ILG + +G V +VG V + G V
Sbjct: 62 FPCILGHEAAGIVESVGEGVTEVQAGDHVI 91
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 115/291 (39%), Gaps = 34/291 (11%)
Query: 35 PRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINP-LDTRMRSGYGRSIFEPLLPLILG 93
P+ E+ V ++VP+ N+V+V+ +S +P + +RMR G S E P G
Sbjct: 20 PKESDMEIKNVTIKLKVPE-GSNDVVVKNLYLSCDPYMRSRMRKIEG-SYVESFAP---G 74
Query: 94 RDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDE----LTPKPVSVTH 149
I+G A + L G F + +Y++++ + + K V +++
Sbjct: 75 SPITGYGVA-----KVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKIHDKDVPLSY 129
Query: 150 ADASAIPFAALTAWRALKCAARMSEGQRXXXXXXXXXXXXXXXQFSVASGCHVSATCGSK 209
+ +TA+ +G+ QF+ GC+V + GSK
Sbjct: 130 Y-TGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSK 188
Query: 210 SIDRVLAA--GAEQAVDY-SSKDIELAIKGKF----DAVLDTIGAPETERLGLNFLKRGG 262
+L + G ++A +Y +D+ A+K F D + +G + + +N
Sbjct: 189 EKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVN------ 242
Query: 263 HYMTLHGETA--ALADHYGLALGLPIATT-VLLKKRMQTWYSYGIDYSYIY 310
M L+G A + Y L + L+ KR++ DY ++Y
Sbjct: 243 --MKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLY 291
>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase
pdb|3M6I|B Chain B, L-Arabinitol 4-Dehydrogenase
Length = 363
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 53 DLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL---PLILGRDISGEVAAVGASVRS 109
+LK EV V R+ I D + P++ +LG + +GEV AV SV+S
Sbjct: 37 ELKEGEVTVAVRSTGICGSDVHF---WKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKS 93
Query: 110 LTVGQEVFGALHPTAV 125
+ VG V A+ P +
Sbjct: 94 IKVGDRV--AIEPQVI 107
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPL 87
+C+A V P V+E +V+V + EV V+ ++ D SG E L
Sbjct: 26 TCKAAVAWEPNKPLVIE---DVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDP---EGL 79
Query: 88 LPLILGRDISGEVAAVGASVRSLTVGQEVF 117
P +LG + +G V +VG V + G V
Sbjct: 80 FPCVLGHEAAGIVESVGEGVTEVQPGDHVI 109
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 193 QFSVASGCHVSA-TCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE 251
+ + A G HV A T + A GA++ V+ + D A FD +L+T+ AP
Sbjct: 212 KLAHAMGAHVVAFTTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNL 271
Query: 252 RLGLNFLKRGGHYMTLHGETA 272
LKR G MTL G A
Sbjct: 272 DDFTTLLKRDG-TMTLVGAPA 291
>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase
pdb|1KOL|B Chain B, Crystal Structure Of Formaldehyde Dehydrogenase
Length = 398
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 30 RAVVLPRFGGPEVLEVR-PNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLL 88
R VV G EV ++ P ++ P K E V + VS N + GR+ + +
Sbjct: 4 RGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQ--V 61
Query: 89 PLILGRDISGEVAAVGASVRSLTVGQEV 116
L+LG +I+GEV G V +L +G V
Sbjct: 62 GLVLGHEITGEVIEKGRDVENLQIGDLV 89
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 57 NEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEV 116
+EVLV+ A + D +R + LP +LG + SG + A+G +V L VG V
Sbjct: 32 DEVLVKVVATGMCHTDLIVRD----QKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHV 87
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Query: 31 AVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPL 90
A+VL +F P V + E+ D+ +LV + + D M G + LP+
Sbjct: 20 AMVLEKFNQPLVYK---EFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRV---PLPI 73
Query: 91 ILGRDISGEVAAVGASVRSLT 111
ILG + +G V V R L
Sbjct: 74 ILGHEGAGRVVEVNGEKRDLN 94
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 50 EVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS 109
++P+ P + LVR A++ P + + + +I + +ILG + G++ VG+ V+
Sbjct: 18 KIPECGPLDALVRPLALA--PCTSDTHTVWAGAIGDRH-DMILGHEAVGQIVKVGSLVKR 74
Query: 110 LTVGQEVF 117
L VG +V
Sbjct: 75 LKVGDKVI 82
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 50 EVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS 109
++P+ P + LVR A++ P + + + +I + +ILG + G++ VG+ V+
Sbjct: 18 KIPECGPLDALVRPLALA--PCTSDTHTVWAGAIGD-RHDMILGHEAVGQIVKVGSLVKR 74
Query: 110 LTVGQEVF 117
L VG +V
Sbjct: 75 LKVGDKVI 82
>pdb|4A17|V Chain V, T.Thermophila 60s Ribosomal Subunit In Complex With
Initiation Factor 6. This File Contains 5s Rrna, 5.8s
Rrna And Proteins Of Molecule 2.
pdb|4A1A|V Chain V, T.Thermophila 60s Ribosomal Subunit In Complex With
Initiation Factor 6. This File Contains 5s Rrna, 5.8s
Rrna And Proteins Of Molecule 3.
pdb|4A1C|V Chain V, T.Thermophila 60s Ribosomal Subunit In Complex With
Initiation Factor 6. This File Contains 5s Rrna, 5.8s
Rrna And Proteins Of Molecule 4.
pdb|4A1E|V Chain V, T.Thermophila 60s Ribosomal Subunit In Complex With
Initiation Factor 6. This File Contains 5s Rrna, 5.8s
Rrna And Proteins Of Molecule 1
Length = 239
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 287 ATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVD 335
A++ +K+R W S Y+ Y A+ + ++E R+ +TG +P +
Sbjct: 29 ASSAQMKQRKAEWISKAQKYAAEYEAAEKKIVDEKRKARKTGAFYVPAE 77
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPL 87
+C+A V P LE + V K +EV ++ A I D+ + + I
Sbjct: 9 TCKAAVAWEPHKPLSLE---TITVAPPKAHEVRIKILASGICGSDSSVL----KEIIPSK 61
Query: 88 LPLILGRDISGEVAAVGASVRSLTVGQEVFGALHP 122
P+ILG + G V ++GA V + G +V P
Sbjct: 62 FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVP 96
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,762,772
Number of Sequences: 62578
Number of extensions: 384780
Number of successful extensions: 1088
Number of sequences better than 100.0: 97
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 978
Number of HSP's gapped (non-prelim): 117
length of query: 364
length of database: 14,973,337
effective HSP length: 100
effective length of query: 264
effective length of database: 8,715,537
effective search space: 2300901768
effective search space used: 2300901768
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)