Query 017901
Match_columns 364
No_of_seqs 148 out of 1538
Neff 9.7
Searched_HMMs 46136
Date Fri Mar 29 04:25:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017901.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017901hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 8.7E-59 1.9E-63 412.1 28.4 313 26-364 1-338 (339)
2 COG0604 Qor NADPH:quinone redu 100.0 4E-52 8.6E-57 378.8 31.4 314 29-363 1-326 (326)
3 KOG1197 Predicted quinone oxid 100.0 7.8E-51 1.7E-55 337.2 25.2 317 25-363 5-330 (336)
4 KOG0023 Alcohol dehydrogenase, 100.0 9.7E-51 2.1E-55 348.7 24.9 316 23-364 4-355 (360)
5 KOG0024 Sorbitol dehydrogenase 100.0 8.8E-49 1.9E-53 337.5 26.1 312 26-363 2-352 (354)
6 COG1062 AdhC Zn-dependent alco 100.0 2.4E-47 5.3E-52 331.5 25.5 310 28-363 2-366 (366)
7 cd08281 liver_ADH_like1 Zinc-d 100.0 2.6E-46 5.7E-51 350.1 30.6 311 29-361 1-371 (371)
8 TIGR03451 mycoS_dep_FDH mycoth 100.0 2.3E-45 5E-50 342.3 30.8 310 28-362 1-357 (358)
9 cd08239 THR_DH_like L-threonin 100.0 3.3E-45 7.1E-50 339.1 31.5 306 29-363 1-339 (339)
10 PLN02586 probable cinnamyl alc 100.0 4.6E-45 9.9E-50 339.8 31.8 311 26-363 10-353 (360)
11 PRK09880 L-idonate 5-dehydroge 100.0 4.7E-45 1E-49 338.2 31.5 305 28-363 4-343 (343)
12 PLN02178 cinnamyl-alcohol dehy 100.0 3.3E-44 7.2E-49 335.1 32.6 309 29-363 5-348 (375)
13 KOG0025 Zn2+-binding dehydroge 100.0 1.7E-44 3.6E-49 304.9 26.6 318 22-363 13-352 (354)
14 PLN02740 Alcohol dehydrogenase 100.0 8.3E-44 1.8E-48 334.2 31.2 314 26-363 8-381 (381)
15 PLN02514 cinnamyl-alcohol dehy 100.0 2E-43 4.4E-48 328.7 32.4 311 27-364 8-351 (357)
16 TIGR02818 adh_III_F_hyde S-(hy 100.0 2.5E-43 5.4E-48 329.4 32.3 310 29-363 2-368 (368)
17 PLN02827 Alcohol dehydrogenase 100.0 2.7E-43 5.8E-48 329.9 32.2 309 28-364 12-377 (378)
18 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.3E-43 2.8E-48 326.3 29.5 302 31-362 1-329 (329)
19 KOG0022 Alcohol dehydrogenase, 100.0 1.4E-43 3E-48 303.1 26.0 314 25-363 4-375 (375)
20 cd08291 ETR_like_1 2-enoyl thi 100.0 4.2E-43 9.1E-48 322.9 30.8 307 29-361 1-323 (324)
21 cd08301 alcohol_DH_plants Plan 100.0 9.9E-43 2.1E-47 325.9 31.8 309 28-361 2-368 (369)
22 TIGR01202 bchC 2-desacetyl-2-h 100.0 7.8E-43 1.7E-47 318.3 28.3 298 28-362 1-308 (308)
23 cd08230 glucose_DH Glucose deh 100.0 1.1E-42 2.3E-47 324.0 29.8 312 29-363 1-355 (355)
24 cd08300 alcohol_DH_class_III c 100.0 3.2E-42 6.9E-47 322.2 31.9 310 28-362 2-368 (368)
25 PRK10309 galactitol-1-phosphat 100.0 8.6E-42 1.9E-46 317.1 30.6 310 29-364 1-347 (347)
26 TIGR02819 fdhA_non_GSH formald 100.0 1.1E-41 2.3E-46 319.7 30.9 320 28-364 2-391 (393)
27 cd08237 ribitol-5-phosphate_DH 100.0 6.8E-42 1.5E-46 316.5 28.8 301 29-364 3-340 (341)
28 cd08277 liver_alcohol_DH_like 100.0 2.5E-41 5.4E-46 315.8 31.3 308 28-362 2-365 (365)
29 PLN03154 putative allyl alcoho 100.0 3.1E-41 6.7E-46 312.7 31.5 313 28-364 8-346 (348)
30 TIGR03201 dearomat_had 6-hydro 100.0 3E-41 6.5E-46 313.5 30.6 304 32-363 2-349 (349)
31 cd08238 sorbose_phosphate_red 100.0 2.1E-41 4.7E-46 320.5 30.1 315 28-363 2-368 (410)
32 cd08233 butanediol_DH_like (2R 100.0 7.1E-41 1.5E-45 311.5 31.0 307 29-361 1-350 (351)
33 cd08292 ETR_like_2 2-enoyl thi 100.0 9.8E-41 2.1E-45 307.2 30.1 308 29-362 1-324 (324)
34 cd08294 leukotriene_B4_DH_like 100.0 2.3E-40 5.1E-45 305.3 30.5 307 28-363 2-329 (329)
35 cd08295 double_bond_reductase_ 100.0 2.8E-40 6E-45 305.9 30.6 311 29-363 8-338 (338)
36 cd08293 PTGR2 Prostaglandin re 100.0 5.3E-40 1.2E-44 305.0 32.5 307 40-363 20-345 (345)
37 cd08296 CAD_like Cinnamyl alco 100.0 3.8E-40 8.2E-45 304.4 31.2 305 29-362 1-333 (333)
38 cd08231 MDR_TM0436_like Hypoth 100.0 7.3E-40 1.6E-44 305.9 30.4 309 30-363 2-361 (361)
39 COG1063 Tdh Threonine dehydrog 100.0 6.5E-40 1.4E-44 302.5 28.8 309 29-363 1-350 (350)
40 TIGR02825 B4_12hDH leukotriene 100.0 1.2E-39 2.6E-44 300.1 30.3 296 38-362 14-325 (325)
41 cd08274 MDR9 Medium chain dehy 100.0 2.5E-39 5.5E-44 301.0 32.0 315 29-363 1-350 (350)
42 cd05284 arabinose_DH_like D-ar 100.0 2.4E-39 5.1E-44 300.0 31.0 309 29-363 1-340 (340)
43 TIGR02817 adh_fam_1 zinc-bindi 100.0 7.4E-39 1.6E-43 296.2 31.4 306 30-362 1-334 (336)
44 KOG1198 Zinc-binding oxidoredu 100.0 9.1E-39 2E-43 291.0 30.2 326 28-364 4-346 (347)
45 cd08244 MDR_enoyl_red Possible 100.0 2E-38 4.4E-43 291.7 32.6 313 29-363 1-324 (324)
46 cd08285 NADP_ADH NADP(H)-depen 100.0 8.1E-39 1.8E-43 297.7 29.9 312 29-363 1-351 (351)
47 cd08278 benzyl_alcohol_DH Benz 100.0 1.6E-38 3.6E-43 296.8 31.3 311 27-362 1-365 (365)
48 cd08290 ETR 2-enoyl thioester 100.0 9.3E-39 2E-43 296.2 29.3 313 29-363 1-341 (341)
49 cd08246 crotonyl_coA_red croto 100.0 1.7E-38 3.8E-43 299.7 30.2 319 24-362 8-392 (393)
50 cd08240 6_hydroxyhexanoate_dh_ 100.0 4.3E-38 9.3E-43 292.8 30.8 312 29-363 1-350 (350)
51 TIGR01751 crot-CoA-red crotony 100.0 3.5E-38 7.6E-43 297.9 30.1 320 24-363 3-387 (398)
52 PRK10083 putative oxidoreducta 100.0 6.8E-38 1.5E-42 290.2 31.2 306 29-364 1-338 (339)
53 cd08297 CAD3 Cinnamyl alcohol 100.0 6.7E-38 1.4E-42 290.5 31.1 311 29-363 1-341 (341)
54 cd08263 Zn_ADH10 Alcohol dehyd 100.0 6.7E-38 1.4E-42 293.2 30.1 310 29-362 1-367 (367)
55 PRK10754 quinone oxidoreductas 100.0 9.6E-38 2.1E-42 287.7 30.4 317 28-363 1-327 (327)
56 cd05283 CAD1 Cinnamyl alcohol 100.0 1.1E-37 2.4E-42 288.4 30.6 305 30-362 1-337 (337)
57 PTZ00354 alcohol dehydrogenase 100.0 1.9E-37 4.1E-42 286.4 31.8 312 28-363 1-328 (334)
58 PRK09422 ethanol-active dehydr 100.0 2.2E-37 4.7E-42 286.7 30.8 306 29-363 1-336 (338)
59 COG2130 Putative NADP-dependen 100.0 3E-37 6.6E-42 263.6 28.6 298 41-363 25-338 (340)
60 cd08248 RTN4I1 Human Reticulon 100.0 7.6E-37 1.6E-41 284.4 34.0 330 29-362 1-350 (350)
61 cd08270 MDR4 Medium chain dehy 100.0 3E-37 6.5E-42 281.6 30.3 299 29-363 1-305 (305)
62 cd08299 alcohol_DH_class_I_II_ 100.0 4.9E-37 1.1E-41 287.4 31.9 310 28-363 7-373 (373)
63 PRK13771 putative alcohol dehy 100.0 2.6E-37 5.6E-42 285.7 29.7 307 29-363 1-333 (334)
64 cd08260 Zn_ADH6 Alcohol dehydr 100.0 6.1E-37 1.3E-41 284.5 32.0 311 29-362 1-344 (345)
65 PRK05396 tdh L-threonine 3-deh 100.0 5E-37 1.1E-41 284.6 30.5 310 29-364 1-341 (341)
66 cd08283 FDH_like_1 Glutathione 100.0 3.6E-37 7.7E-42 289.7 29.8 308 29-363 1-386 (386)
67 cd05278 FDH_like Formaldehyde 100.0 5.1E-37 1.1E-41 285.2 29.4 308 29-363 1-347 (347)
68 cd08249 enoyl_reductase_like e 100.0 3.2E-37 7E-42 285.5 27.9 310 29-363 1-339 (339)
69 cd08250 Mgc45594_like Mgc45594 100.0 1.2E-36 2.5E-41 280.7 31.4 316 28-362 1-329 (329)
70 cd08279 Zn_ADH_class_III Class 100.0 1.1E-36 2.4E-41 284.4 31.2 308 29-360 1-362 (363)
71 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 1.2E-36 2.6E-41 280.0 31.0 311 29-363 1-325 (325)
72 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 1.4E-36 3E-41 281.2 31.3 310 29-363 1-338 (338)
73 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1E-36 2.2E-41 283.5 30.2 306 29-361 1-350 (350)
74 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1.4E-36 2.9E-41 280.5 30.6 306 29-362 1-332 (332)
75 cd08286 FDH_like_ADH2 formalde 100.0 2.2E-36 4.7E-41 280.8 31.7 307 29-363 1-345 (345)
76 cd08261 Zn_ADH7 Alcohol dehydr 100.0 2E-36 4.3E-41 280.1 31.3 305 29-363 1-337 (337)
77 cd05279 Zn_ADH1 Liver alcohol 100.0 1.4E-36 3E-41 283.8 30.3 307 29-361 1-364 (365)
78 cd08276 MDR7 Medium chain dehy 100.0 4.2E-36 9.2E-41 277.5 32.1 312 29-363 1-336 (336)
79 TIGR02823 oxido_YhdH putative 100.0 4.1E-36 8.8E-41 276.4 31.4 310 30-363 1-323 (323)
80 cd08289 MDR_yhfp_like Yhfp put 100.0 2.5E-36 5.4E-41 278.1 29.7 311 29-363 1-326 (326)
81 cd05282 ETR_like 2-enoyl thioe 100.0 2.5E-36 5.5E-41 277.7 29.6 304 34-362 3-323 (323)
82 cd08282 PFDH_like Pseudomonas 100.0 6.2E-36 1.3E-40 280.5 31.0 317 29-363 1-375 (375)
83 cd08235 iditol_2_DH_like L-idi 100.0 6.9E-36 1.5E-40 277.2 31.0 306 29-362 1-343 (343)
84 cd08262 Zn_ADH8 Alcohol dehydr 100.0 6.2E-36 1.3E-40 277.3 30.3 307 29-362 1-341 (341)
85 cd08243 quinone_oxidoreductase 100.0 1E-35 2.2E-40 273.0 31.0 312 29-361 1-319 (320)
86 cd08284 FDH_like_2 Glutathione 100.0 6.8E-36 1.5E-40 277.3 29.9 304 29-362 1-343 (344)
87 cd08252 AL_MDR Arginate lyase 100.0 1.9E-35 4.1E-40 273.4 32.7 308 29-362 1-336 (336)
88 cd08272 MDR6 Medium chain dehy 100.0 2.5E-35 5.5E-40 270.9 31.8 309 29-363 1-326 (326)
89 cd08242 MDR_like Medium chain 100.0 9.6E-36 2.1E-40 273.5 28.9 292 29-363 1-319 (319)
90 cd08266 Zn_ADH_like1 Alcohol d 100.0 2.9E-35 6.2E-40 272.4 31.9 313 29-363 1-342 (342)
91 cd08236 sugar_DH NAD(P)-depend 100.0 2.2E-35 4.9E-40 273.8 30.2 306 29-361 1-343 (343)
92 cd08247 AST1_like AST1 is a cy 100.0 7.1E-35 1.5E-39 271.3 33.4 327 30-363 2-352 (352)
93 cd08264 Zn_ADH_like2 Alcohol d 100.0 1.7E-35 3.7E-40 272.5 28.8 300 29-360 1-325 (325)
94 cd05285 sorbitol_DH Sorbitol d 100.0 2.3E-35 5E-40 273.6 29.7 302 32-361 2-341 (343)
95 cd05276 p53_inducible_oxidored 100.0 4.3E-35 9.3E-40 268.7 30.8 308 29-361 1-323 (323)
96 cd05289 MDR_like_2 alcohol deh 100.0 6.5E-35 1.4E-39 266.1 31.4 308 29-361 1-309 (309)
97 cd05281 TDH Threonine dehydrog 100.0 4.2E-35 9.1E-40 271.7 30.4 309 29-363 1-341 (341)
98 cd08287 FDH_like_ADH3 formalde 100.0 3.6E-35 7.7E-40 272.6 30.0 304 29-362 1-344 (345)
99 cd08232 idonate-5-DH L-idonate 100.0 6.8E-35 1.5E-39 270.1 31.0 300 39-363 5-339 (339)
100 cd05288 PGDH Prostaglandin deh 100.0 4.7E-35 1E-39 270.0 29.3 310 29-361 2-329 (329)
101 cd08253 zeta_crystallin Zeta-c 100.0 1.2E-34 2.5E-39 266.2 31.7 313 29-363 1-325 (325)
102 cd08288 MDR_yhdh Yhdh putative 100.0 1.2E-34 2.6E-39 266.7 31.6 311 29-363 1-324 (324)
103 cd08298 CAD2 Cinnamyl alcohol 100.0 7.7E-35 1.7E-39 268.6 29.5 302 29-361 1-329 (329)
104 cd08273 MDR8 Medium chain dehy 100.0 1.2E-34 2.6E-39 267.5 30.1 321 29-361 1-330 (331)
105 PLN02702 L-idonate 5-dehydroge 100.0 2E-34 4.4E-39 269.4 31.8 309 27-362 16-363 (364)
106 cd05286 QOR2 Quinone oxidoredu 100.0 2.3E-34 5E-39 263.5 31.5 307 30-363 1-320 (320)
107 TIGR00692 tdh L-threonine 3-de 100.0 1.2E-34 2.6E-39 268.5 29.8 303 36-363 6-340 (340)
108 cd08234 threonine_DH_like L-th 100.0 1.6E-34 3.5E-39 267.0 30.4 303 29-361 1-333 (334)
109 cd08265 Zn_ADH3 Alcohol dehydr 100.0 1.8E-34 3.9E-39 271.3 30.5 310 26-361 26-383 (384)
110 cd08271 MDR5 Medium chain dehy 100.0 5.9E-34 1.3E-38 261.9 32.5 313 29-363 1-325 (325)
111 cd08269 Zn_ADH9 Alcohol dehydr 100.0 2.1E-34 4.6E-39 263.6 29.0 294 40-361 4-311 (312)
112 cd08245 CAD Cinnamyl alcohol d 100.0 3.7E-34 8E-39 264.2 29.6 305 30-361 1-330 (330)
113 TIGR02824 quinone_pig3 putativ 100.0 1.1E-33 2.4E-38 259.8 30.9 310 29-363 1-325 (325)
114 cd08267 MDR1 Medium chain dehy 100.0 1.2E-33 2.7E-38 259.1 29.6 313 33-361 2-319 (319)
115 cd08268 MDR2 Medium chain dehy 100.0 3.1E-33 6.6E-38 257.2 31.0 314 29-363 1-328 (328)
116 cd08258 Zn_ADH4 Alcohol dehydr 100.0 5.5E-33 1.2E-37 253.5 28.5 274 29-328 1-306 (306)
117 cd08241 QOR1 Quinone oxidoredu 100.0 1.5E-32 3.4E-37 251.9 31.0 308 29-362 1-323 (323)
118 cd08275 MDR3 Medium chain dehy 100.0 1.8E-32 3.8E-37 253.4 31.1 325 30-363 1-337 (337)
119 cd08251 polyketide_synthase po 100.0 6.4E-33 1.4E-37 252.3 27.1 288 51-361 2-303 (303)
120 cd05195 enoyl_red enoyl reduct 100.0 6E-31 1.3E-35 237.6 27.6 277 57-361 1-293 (293)
121 TIGR03366 HpnZ_proposed putati 100.0 1.4E-31 3E-36 241.1 21.0 233 91-343 1-280 (280)
122 smart00829 PKS_ER Enoylreducta 100.0 1.6E-30 3.4E-35 234.5 26.0 272 61-361 2-288 (288)
123 KOG1196 Predicted NAD-dependen 100.0 5.2E-29 1.1E-33 212.5 27.9 287 52-363 33-340 (343)
124 cd05188 MDR Medium chain reduc 100.0 5.3E-29 1.1E-33 222.9 25.8 246 58-324 1-270 (271)
125 KOG1202 Animal-type fatty acid 100.0 1.6E-28 3.5E-33 238.7 18.2 292 38-363 1424-1741(2376)
126 cd08255 2-desacetyl-2-hydroxye 100.0 3.8E-27 8.3E-32 212.0 21.7 246 85-361 17-277 (277)
127 PF08240 ADH_N: Alcohol dehydr 99.8 3E-18 6.6E-23 131.5 9.2 86 56-143 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.6 1.7E-15 3.7E-20 120.1 9.5 124 186-327 1-130 (130)
129 PF13602 ADH_zinc_N_2: Zinc-bi 99.6 8E-15 1.7E-19 115.8 6.7 121 217-361 1-127 (127)
130 cd00401 AdoHcyase S-adenosyl-L 99.4 2E-12 4.4E-17 120.2 14.4 175 161-363 187-376 (413)
131 PRK09424 pntA NAD(P) transhydr 99.2 1.2E-09 2.5E-14 104.5 17.1 143 172-332 162-334 (509)
132 PRK05476 S-adenosyl-L-homocyst 98.4 4.3E-06 9.3E-11 78.5 13.3 103 160-270 196-301 (425)
133 TIGR00561 pntA NAD(P) transhyd 98.3 7.9E-06 1.7E-10 78.3 11.2 95 174-270 163-286 (511)
134 TIGR00936 ahcY adenosylhomocys 98.2 1.8E-05 4E-10 73.9 12.7 102 161-270 180-284 (406)
135 PRK11873 arsM arsenite S-adeno 98.1 3.2E-05 7E-10 69.3 11.8 167 170-361 73-259 (272)
136 PLN02494 adenosylhomocysteinas 98.1 3.3E-05 7.2E-10 72.8 12.0 101 162-270 240-343 (477)
137 PRK08306 dipicolinate synthase 98.1 8E-05 1.7E-09 67.3 13.1 92 174-270 151-243 (296)
138 PF11017 DUF2855: Protein of u 98.0 0.00058 1.3E-08 61.2 16.9 164 97-269 38-232 (314)
139 PTZ00075 Adenosylhomocysteinas 97.9 0.00016 3.5E-09 68.5 12.1 91 172-270 251-343 (476)
140 PRK08324 short chain dehydroge 97.8 0.00011 2.4E-09 74.5 10.6 133 127-270 385-559 (681)
141 cd05213 NAD_bind_Glutamyl_tRNA 97.8 0.00018 3.9E-09 65.7 9.9 106 138-250 139-251 (311)
142 PRK12771 putative glutamate sy 97.8 8.7E-05 1.9E-09 73.6 8.2 96 171-268 133-253 (564)
143 PRK00517 prmA ribosomal protei 97.7 0.00044 9.6E-09 61.1 11.2 142 108-270 65-215 (250)
144 COG2518 Pcm Protein-L-isoaspar 97.7 0.00025 5.3E-09 59.6 8.8 110 153-269 53-170 (209)
145 COG4221 Short-chain alcohol de 97.6 0.00037 8.1E-09 59.7 8.6 74 174-247 5-91 (246)
146 TIGR00518 alaDH alanine dehydr 97.5 0.001 2.2E-08 62.2 11.1 94 175-270 167-269 (370)
147 TIGR02853 spore_dpaA dipicolin 97.5 0.0016 3.4E-08 58.7 11.3 92 174-270 150-242 (287)
148 PRK00045 hemA glutamyl-tRNA re 97.4 0.00063 1.4E-08 64.9 8.0 146 90-249 90-254 (423)
149 PF01488 Shikimate_DH: Shikima 97.3 0.00098 2.1E-08 52.9 7.3 93 173-270 10-111 (135)
150 PRK05786 fabG 3-ketoacyl-(acyl 97.3 0.004 8.6E-08 54.3 11.4 97 174-270 4-137 (238)
151 PRK12742 oxidoreductase; Provi 97.3 0.0037 8E-08 54.4 11.1 97 174-270 5-133 (237)
152 PRK05693 short chain dehydroge 97.3 0.0039 8.5E-08 55.8 11.4 72 176-247 2-82 (274)
153 PRK05993 short chain dehydroge 97.2 0.0047 1E-07 55.4 11.5 74 174-247 3-86 (277)
154 PF13460 NAD_binding_10: NADH( 97.2 0.0023 4.9E-08 53.4 8.8 91 178-270 1-99 (183)
155 PRK14175 bifunctional 5,10-met 97.2 0.0058 1.3E-07 54.5 11.3 97 153-270 136-232 (286)
156 PLN03209 translocon at the inn 97.1 0.0045 9.8E-08 60.4 11.3 102 168-270 73-209 (576)
157 PRK00377 cbiT cobalt-precorrin 97.1 0.014 3.1E-07 49.5 12.6 98 168-267 34-144 (198)
158 PF01135 PCMT: Protein-L-isoas 97.1 0.0022 4.8E-08 54.7 7.5 106 158-269 58-173 (209)
159 PRK06182 short chain dehydroge 97.0 0.0079 1.7E-07 53.7 11.3 74 174-247 2-84 (273)
160 PRK14189 bifunctional 5,10-met 97.0 0.0065 1.4E-07 54.1 10.3 96 154-270 137-232 (285)
161 cd01080 NAD_bind_m-THF_DH_Cycl 97.0 0.0084 1.8E-07 49.3 10.3 97 153-270 22-118 (168)
162 COG3967 DltE Short-chain dehyd 97.0 0.0034 7.4E-08 52.3 7.6 74 174-247 4-88 (245)
163 COG0300 DltE Short-chain dehyd 97.0 0.0032 7E-08 55.4 8.0 76 173-248 4-95 (265)
164 PRK11705 cyclopropane fatty ac 97.0 0.0054 1.2E-07 57.6 9.9 111 155-268 148-267 (383)
165 PRK08261 fabG 3-ketoacyl-(acyl 97.0 0.011 2.4E-07 57.1 12.3 74 174-247 209-294 (450)
166 PF02353 CMAS: Mycolic acid cy 97.0 0.0027 5.8E-08 56.7 7.4 103 163-268 51-166 (273)
167 TIGR00406 prmA ribosomal prote 97.0 0.0091 2E-07 53.9 10.9 96 172-270 157-261 (288)
168 PRK08265 short chain dehydroge 96.9 0.011 2.4E-07 52.5 11.1 97 174-270 5-138 (261)
169 PF02882 THF_DHG_CYH_C: Tetrah 96.9 0.012 2.6E-07 47.8 10.1 98 152-270 13-110 (160)
170 PRK13943 protein-L-isoaspartat 96.9 0.016 3.5E-07 52.9 12.1 97 168-267 74-179 (322)
171 PRK07109 short chain dehydroge 96.9 0.012 2.7E-07 54.3 11.6 74 174-247 7-95 (334)
172 PRK14191 bifunctional 5,10-met 96.9 0.012 2.7E-07 52.3 10.9 96 153-270 135-231 (285)
173 COG2242 CobL Precorrin-6B meth 96.9 0.021 4.4E-07 47.2 11.1 99 168-269 28-136 (187)
174 PF02826 2-Hacid_dh_C: D-isome 96.9 0.0074 1.6E-07 50.3 8.9 89 173-269 34-128 (178)
175 COG2230 Cfa Cyclopropane fatty 96.9 0.014 3E-07 51.7 10.9 108 160-270 58-178 (283)
176 PF00670 AdoHcyase_NAD: S-aden 96.8 0.02 4.4E-07 46.3 10.7 101 162-270 9-112 (162)
177 PRK10792 bifunctional 5,10-met 96.8 0.014 3E-07 51.9 10.7 95 154-270 138-233 (285)
178 cd05212 NAD_bind_m-THF_DH_Cycl 96.8 0.022 4.7E-07 45.3 10.7 96 154-270 7-102 (140)
179 PRK14194 bifunctional 5,10-met 96.8 0.015 3.2E-07 52.2 10.8 97 153-270 137-233 (301)
180 PRK07806 short chain dehydroge 96.8 0.022 4.7E-07 50.0 11.6 96 174-269 5-135 (248)
181 PRK14188 bifunctional 5,10-met 96.7 0.018 3.9E-07 51.7 10.7 96 153-270 136-232 (296)
182 cd01078 NAD_bind_H4MPT_DH NADP 96.7 0.02 4.3E-07 48.4 10.5 74 174-248 27-108 (194)
183 COG2910 Putative NADH-flavin r 96.7 0.0091 2E-07 48.9 7.7 90 177-270 2-106 (211)
184 PRK05872 short chain dehydroge 96.7 0.011 2.4E-07 53.6 9.3 74 174-247 8-95 (296)
185 TIGR01035 hemA glutamyl-tRNA r 96.7 0.014 3.1E-07 55.5 10.3 144 90-249 88-252 (417)
186 CHL00194 ycf39 Ycf39; Provisio 96.7 0.014 3E-07 53.5 10.0 93 177-270 2-111 (317)
187 PRK06139 short chain dehydroge 96.6 0.0081 1.8E-07 55.4 8.2 74 174-247 6-94 (330)
188 PRK13944 protein-L-isoaspartat 96.6 0.022 4.7E-07 48.7 10.2 98 168-268 66-173 (205)
189 PRK14192 bifunctional 5,10-met 96.6 0.027 5.7E-07 50.5 10.9 94 156-270 140-233 (283)
190 PRK07326 short chain dehydroge 96.6 0.032 7E-07 48.5 11.3 74 174-247 5-92 (237)
191 PRK08339 short chain dehydroge 96.6 0.02 4.3E-07 50.9 10.1 97 174-270 7-145 (263)
192 PRK07060 short chain dehydroge 96.5 0.017 3.7E-07 50.5 9.3 74 174-247 8-87 (245)
193 PRK06128 oxidoreductase; Provi 96.5 0.035 7.5E-07 50.4 11.6 97 174-270 54-193 (300)
194 PRK07832 short chain dehydroge 96.5 0.037 8E-07 49.4 11.6 71 177-247 2-88 (272)
195 PRK08415 enoyl-(acyl carrier p 96.5 0.034 7.3E-07 49.8 11.2 97 174-270 4-145 (274)
196 PRK07231 fabG 3-ketoacyl-(acyl 96.5 0.031 6.8E-07 48.9 10.9 74 174-247 4-91 (251)
197 PRK14177 bifunctional 5,10-met 96.5 0.029 6.3E-07 49.9 10.3 97 153-270 137-233 (284)
198 PRK12367 short chain dehydroge 96.5 0.016 3.5E-07 50.9 8.9 74 174-247 13-89 (245)
199 PRK12939 short chain dehydroge 96.5 0.028 6E-07 49.2 10.4 74 174-247 6-94 (250)
200 PRK14169 bifunctional 5,10-met 96.5 0.03 6.4E-07 49.8 10.3 97 153-270 134-230 (282)
201 PRK13942 protein-L-isoaspartat 96.5 0.028 6E-07 48.3 9.9 97 168-268 70-176 (212)
202 PRK07985 oxidoreductase; Provi 96.5 0.028 6E-07 50.9 10.4 97 174-270 48-187 (294)
203 PRK06057 short chain dehydroge 96.5 0.022 4.8E-07 50.2 9.6 74 174-247 6-89 (255)
204 PRK14180 bifunctional 5,10-met 96.5 0.032 6.8E-07 49.6 10.3 97 153-270 136-232 (282)
205 PRK14176 bifunctional 5,10-met 96.5 0.035 7.6E-07 49.5 10.5 96 153-270 142-238 (287)
206 PRK14173 bifunctional 5,10-met 96.4 0.031 6.8E-07 49.8 10.1 95 154-270 134-229 (287)
207 PRK14179 bifunctional 5,10-met 96.4 0.032 7E-07 49.7 10.1 96 154-270 137-232 (284)
208 PRK06500 short chain dehydroge 96.4 0.016 3.6E-07 50.7 8.5 74 174-247 5-90 (249)
209 PRK06484 short chain dehydroge 96.4 0.03 6.6E-07 55.0 11.2 97 174-270 268-402 (520)
210 PRK09186 flagellin modificatio 96.4 0.048 1E-06 48.0 11.5 73 174-246 3-92 (256)
211 KOG1205 Predicted dehydrogenas 96.4 0.015 3.2E-07 51.7 7.9 97 174-270 11-151 (282)
212 PRK14190 bifunctional 5,10-met 96.4 0.039 8.5E-07 49.2 10.5 96 153-270 136-232 (284)
213 PLN02516 methylenetetrahydrofo 96.4 0.04 8.7E-07 49.4 10.6 97 153-270 145-241 (299)
214 PRK12829 short chain dehydroge 96.4 0.028 6E-07 49.8 9.6 77 172-248 8-97 (264)
215 PRK06200 2,3-dihydroxy-2,3-dih 96.3 0.019 4E-07 51.0 8.4 74 174-247 5-90 (263)
216 PRK07825 short chain dehydroge 96.3 0.023 5.1E-07 50.6 9.1 73 175-247 5-88 (273)
217 cd01079 NAD_bind_m-THF_DH NAD 96.3 0.046 9.9E-07 45.6 9.6 115 153-270 31-158 (197)
218 PRK08267 short chain dehydroge 96.3 0.052 1.1E-06 48.0 10.9 72 176-247 2-87 (260)
219 PRK07831 short chain dehydroge 96.3 0.033 7.2E-07 49.3 9.6 75 173-247 15-107 (262)
220 PRK14166 bifunctional 5,10-met 96.3 0.048 1E-06 48.5 10.3 97 153-270 135-231 (282)
221 PRK14170 bifunctional 5,10-met 96.3 0.043 9.4E-07 48.8 10.0 96 154-270 136-231 (284)
222 PRK14172 bifunctional 5,10-met 96.3 0.047 1E-06 48.4 10.2 95 154-270 137-232 (278)
223 PRK14186 bifunctional 5,10-met 96.3 0.05 1.1E-06 48.8 10.5 95 154-270 137-232 (297)
224 TIGR02469 CbiT precorrin-6Y C5 96.3 0.089 1.9E-06 40.4 11.0 99 168-268 13-122 (124)
225 PF05368 NmrA: NmrA-like famil 96.3 0.029 6.3E-07 48.8 9.0 87 178-265 1-99 (233)
226 PRK06841 short chain dehydroge 96.2 0.031 6.7E-07 49.2 9.2 74 174-247 14-99 (255)
227 PRK06196 oxidoreductase; Provi 96.2 0.026 5.5E-07 51.7 8.9 74 174-247 25-109 (315)
228 PRK08589 short chain dehydroge 96.2 0.024 5.3E-07 50.6 8.6 74 174-247 5-92 (272)
229 PF12847 Methyltransf_18: Meth 96.2 0.022 4.8E-07 43.1 7.1 92 174-267 1-110 (112)
230 COG2264 PrmA Ribosomal protein 96.2 0.068 1.5E-06 47.9 11.0 146 109-270 108-265 (300)
231 PRK12481 2-deoxy-D-gluconate 3 96.2 0.025 5.3E-07 49.9 8.3 74 174-247 7-93 (251)
232 PRK08261 fabG 3-ketoacyl-(acyl 96.2 0.0084 1.8E-07 57.8 5.8 92 169-270 28-125 (450)
233 TIGR03325 BphB_TodD cis-2,3-di 96.2 0.032 7E-07 49.4 9.1 74 174-247 4-89 (262)
234 PRK12828 short chain dehydroge 96.2 0.029 6.2E-07 48.7 8.6 74 174-247 6-92 (239)
235 PRK06079 enoyl-(acyl carrier p 96.2 0.029 6.3E-07 49.5 8.6 97 174-270 6-145 (252)
236 PRK06179 short chain dehydroge 96.2 0.022 4.7E-07 50.7 7.9 73 174-247 3-83 (270)
237 PRK14187 bifunctional 5,10-met 96.2 0.055 1.2E-06 48.4 10.1 97 153-270 138-234 (294)
238 PRK07063 short chain dehydroge 96.2 0.029 6.3E-07 49.6 8.6 74 174-247 6-96 (260)
239 PF13241 NAD_binding_7: Putati 96.1 0.012 2.6E-07 44.1 5.2 88 174-270 6-93 (103)
240 PRK08594 enoyl-(acyl carrier p 96.1 0.067 1.4E-06 47.4 10.8 97 174-270 6-149 (257)
241 PRK07814 short chain dehydroge 96.1 0.031 6.8E-07 49.6 8.8 74 174-247 9-97 (263)
242 PRK06483 dihydromonapterin red 96.1 0.041 8.9E-07 47.9 9.3 73 175-247 2-84 (236)
243 PRK14178 bifunctional 5,10-met 96.1 0.071 1.5E-06 47.4 10.5 96 153-270 130-226 (279)
244 PRK06180 short chain dehydroge 96.1 0.039 8.4E-07 49.4 9.2 74 174-247 3-88 (277)
245 PRK07576 short chain dehydroge 96.1 0.029 6.2E-07 49.9 8.3 74 174-247 8-96 (264)
246 PRK05866 short chain dehydroge 96.1 0.028 6.1E-07 50.9 8.3 74 174-247 39-127 (293)
247 PRK06949 short chain dehydroge 96.1 0.035 7.6E-07 48.9 8.7 75 173-247 7-96 (258)
248 PRK05717 oxidoreductase; Valid 96.1 0.044 9.6E-07 48.3 9.4 74 174-247 9-94 (255)
249 PRK09072 short chain dehydroge 96.1 0.069 1.5E-06 47.3 10.6 74 174-247 4-90 (263)
250 cd01065 NAD_bind_Shikimate_DH 96.1 0.054 1.2E-06 43.8 9.1 94 173-269 17-117 (155)
251 KOG1201 Hydroxysteroid 17-beta 96.1 0.043 9.4E-07 48.6 8.9 74 174-247 37-124 (300)
252 PRK12429 3-hydroxybutyrate deh 96.1 0.093 2E-06 46.1 11.4 74 174-247 3-91 (258)
253 PRK07062 short chain dehydroge 96.1 0.034 7.5E-07 49.3 8.6 74 174-247 7-97 (265)
254 PRK08217 fabG 3-ketoacyl-(acyl 96.1 0.046 9.9E-07 47.9 9.4 74 174-247 4-92 (253)
255 PRK14171 bifunctional 5,10-met 96.1 0.072 1.6E-06 47.5 10.4 96 154-270 138-233 (288)
256 PRK14182 bifunctional 5,10-met 96.0 0.078 1.7E-06 47.1 10.4 96 154-270 136-231 (282)
257 PRK08263 short chain dehydroge 96.0 0.068 1.5E-06 47.7 10.5 73 175-247 3-87 (275)
258 PRK06718 precorrin-2 dehydroge 96.0 0.049 1.1E-06 46.3 8.9 89 174-268 9-100 (202)
259 PRK14185 bifunctional 5,10-met 96.0 0.073 1.6E-06 47.6 10.2 97 153-270 135-235 (293)
260 PRK06505 enoyl-(acyl carrier p 96.0 0.044 9.5E-07 49.0 9.1 74 174-247 6-95 (271)
261 TIGR01832 kduD 2-deoxy-D-gluco 96.0 0.041 8.9E-07 48.2 8.7 74 174-247 4-90 (248)
262 PRK05854 short chain dehydroge 96.0 0.033 7.2E-07 50.9 8.3 74 174-247 13-103 (313)
263 PRK14183 bifunctional 5,10-met 96.0 0.077 1.7E-06 47.2 10.1 96 153-270 135-231 (281)
264 PRK05867 short chain dehydroge 96.0 0.039 8.5E-07 48.6 8.5 74 174-247 8-96 (253)
265 PLN02616 tetrahydrofolate dehy 96.0 0.069 1.5E-06 48.9 9.9 96 154-270 210-305 (364)
266 PRK13940 glutamyl-tRNA reducta 95.9 0.075 1.6E-06 50.4 10.6 73 173-249 179-254 (414)
267 PRK06194 hypothetical protein; 95.9 0.044 9.4E-07 49.3 8.7 73 175-247 6-93 (287)
268 TIGR00080 pimt protein-L-isoas 95.9 0.076 1.6E-06 45.7 9.8 98 168-268 71-177 (215)
269 PRK07478 short chain dehydroge 95.9 0.045 9.7E-07 48.2 8.6 74 174-247 5-93 (254)
270 PRK08017 oxidoreductase; Provi 95.9 0.055 1.2E-06 47.6 9.2 72 176-247 3-84 (256)
271 PLN02253 xanthoxin dehydrogena 95.9 0.056 1.2E-06 48.4 9.3 74 174-247 17-104 (280)
272 PRK12937 short chain dehydroge 95.9 0.13 2.9E-06 44.8 11.5 97 174-270 4-141 (245)
273 PRK06523 short chain dehydroge 95.9 0.02 4.3E-07 50.7 6.3 72 174-247 8-87 (260)
274 KOG1199 Short-chain alcohol de 95.9 0.037 8.1E-07 44.7 7.0 76 173-248 7-94 (260)
275 PRK05876 short chain dehydroge 95.9 0.042 9E-07 49.2 8.4 74 174-247 5-93 (275)
276 PRK08177 short chain dehydroge 95.9 0.053 1.1E-06 46.8 8.8 72 176-247 2-81 (225)
277 PRK14181 bifunctional 5,10-met 95.9 0.096 2.1E-06 46.7 10.3 97 153-270 131-231 (287)
278 PRK07424 bifunctional sterol d 95.9 0.056 1.2E-06 51.1 9.3 73 174-247 177-255 (406)
279 PRK14193 bifunctional 5,10-met 95.9 0.087 1.9E-06 46.9 10.0 95 154-270 137-234 (284)
280 PRK07856 short chain dehydroge 95.9 0.032 6.9E-07 49.1 7.4 73 174-247 5-85 (252)
281 PRK07533 enoyl-(acyl carrier p 95.9 0.058 1.3E-06 47.7 9.1 97 174-270 9-150 (258)
282 PRK07523 gluconate 5-dehydroge 95.8 0.05 1.1E-06 47.9 8.7 74 174-247 9-97 (255)
283 PRK07890 short chain dehydroge 95.8 0.04 8.7E-07 48.5 8.0 74 174-247 4-92 (258)
284 PRK07453 protochlorophyllide o 95.8 0.052 1.1E-06 49.8 9.0 73 174-246 5-92 (322)
285 PRK06935 2-deoxy-D-gluconate 3 95.8 0.045 9.8E-07 48.3 8.3 74 174-247 14-101 (258)
286 PRK09291 short chain dehydroge 95.8 0.056 1.2E-06 47.6 8.8 73 175-247 2-83 (257)
287 PRK06463 fabG 3-ketoacyl-(acyl 95.8 0.072 1.6E-06 46.9 9.5 74 174-247 6-89 (255)
288 PRK13243 glyoxylate reductase; 95.8 0.086 1.9E-06 48.6 10.1 88 174-269 149-241 (333)
289 PRK08993 2-deoxy-D-gluconate 3 95.8 0.059 1.3E-06 47.5 8.9 74 174-247 9-95 (253)
290 PRK12823 benD 1,6-dihydroxycyc 95.8 0.07 1.5E-06 47.1 9.4 74 174-247 7-94 (260)
291 PRK14167 bifunctional 5,10-met 95.8 0.1 2.2E-06 46.9 10.1 96 154-270 136-235 (297)
292 PRK13394 3-hydroxybutyrate deh 95.8 0.056 1.2E-06 47.7 8.6 74 174-247 6-94 (262)
293 PRK07904 short chain dehydroge 95.8 0.074 1.6E-06 46.9 9.3 77 171-247 4-97 (253)
294 PLN02897 tetrahydrofolate dehy 95.7 0.09 1.9E-06 47.9 9.7 97 153-270 192-288 (345)
295 PRK06484 short chain dehydroge 95.7 0.058 1.2E-06 53.1 9.4 74 174-247 4-89 (520)
296 PF06325 PrmA: Ribosomal prote 95.7 0.024 5.2E-07 51.0 6.0 143 109-270 107-261 (295)
297 KOG0725 Reductases with broad 95.7 0.053 1.2E-06 48.4 8.2 76 173-248 6-100 (270)
298 PRK14168 bifunctional 5,10-met 95.7 0.1 2.2E-06 46.8 9.8 97 153-270 139-239 (297)
299 PRK14184 bifunctional 5,10-met 95.7 0.11 2.4E-06 46.3 10.0 96 154-270 136-235 (286)
300 PRK08220 2,3-dihydroxybenzoate 95.7 0.13 2.8E-06 45.1 10.6 70 174-247 7-86 (252)
301 TIGR01470 cysG_Nterm siroheme 95.7 0.11 2.5E-06 44.2 9.7 91 174-268 8-100 (205)
302 PRK08690 enoyl-(acyl carrier p 95.6 0.074 1.6E-06 47.2 8.9 74 174-247 5-94 (261)
303 PRK06114 short chain dehydroge 95.6 0.082 1.8E-06 46.6 9.0 74 174-247 7-96 (254)
304 PRK06398 aldose dehydrogenase; 95.6 0.049 1.1E-06 48.2 7.6 70 174-247 5-82 (258)
305 PRK06603 enoyl-(acyl carrier p 95.6 0.074 1.6E-06 47.1 8.8 74 174-247 7-96 (260)
306 PRK07677 short chain dehydroge 95.6 0.077 1.7E-06 46.7 8.8 73 175-247 1-88 (252)
307 PRK07067 sorbitol dehydrogenas 95.6 0.069 1.5E-06 47.1 8.5 74 174-247 5-90 (257)
308 PRK06138 short chain dehydroge 95.6 0.064 1.4E-06 47.0 8.2 74 174-247 4-91 (252)
309 PRK00258 aroE shikimate 5-dehy 95.6 0.096 2.1E-06 47.0 9.4 93 173-268 121-221 (278)
310 PRK04148 hypothetical protein; 95.6 0.13 2.8E-06 40.4 8.7 89 170-262 12-102 (134)
311 PRK06172 short chain dehydroge 95.6 0.075 1.6E-06 46.7 8.6 74 174-247 6-94 (253)
312 PLN02928 oxidoreductase family 95.6 0.12 2.5E-06 48.0 10.1 94 174-269 158-263 (347)
313 PRK06077 fabG 3-ketoacyl-(acyl 95.6 0.16 3.5E-06 44.4 10.8 96 175-270 6-142 (252)
314 PRK07454 short chain dehydroge 95.5 0.097 2.1E-06 45.6 9.2 75 173-247 4-93 (241)
315 PRK07024 short chain dehydroge 95.5 0.076 1.6E-06 46.9 8.6 73 175-247 2-88 (257)
316 PRK09242 tropinone reductase; 95.5 0.074 1.6E-06 46.9 8.5 74 174-247 8-98 (257)
317 PRK08628 short chain dehydroge 95.5 0.072 1.6E-06 47.0 8.4 74 174-247 6-93 (258)
318 PRK06198 short chain dehydroge 95.5 0.081 1.8E-06 46.7 8.7 74 174-247 5-94 (260)
319 PRK06197 short chain dehydroge 95.5 0.074 1.6E-06 48.4 8.7 37 174-210 15-51 (306)
320 PRK08303 short chain dehydroge 95.5 0.07 1.5E-06 48.6 8.4 35 174-208 7-41 (305)
321 PRK08643 acetoin reductase; Va 95.5 0.072 1.6E-06 46.9 8.3 73 175-247 2-89 (256)
322 COG0190 FolD 5,10-methylene-te 95.5 0.11 2.4E-06 45.8 9.1 97 153-270 134-230 (283)
323 PRK06181 short chain dehydroge 95.5 0.077 1.7E-06 46.9 8.5 73 175-247 1-88 (263)
324 PRK15469 ghrA bifunctional gly 95.5 0.13 2.7E-06 47.0 9.9 88 174-269 135-227 (312)
325 PRK08226 short chain dehydroge 95.5 0.098 2.1E-06 46.3 9.1 74 174-247 5-92 (263)
326 PRK08862 short chain dehydroge 95.5 0.082 1.8E-06 45.9 8.4 74 174-247 4-93 (227)
327 COG0334 GdhA Glutamate dehydro 95.5 0.24 5.2E-06 46.1 11.5 110 152-267 185-333 (411)
328 PRK07774 short chain dehydroge 95.5 0.081 1.8E-06 46.3 8.5 74 174-247 5-93 (250)
329 PRK07889 enoyl-(acyl carrier p 95.5 0.092 2E-06 46.4 8.8 96 174-269 6-146 (256)
330 PRK12826 3-ketoacyl-(acyl-carr 95.5 0.075 1.6E-06 46.5 8.2 74 174-247 5-93 (251)
331 PRK12743 oxidoreductase; Provi 95.4 0.091 2E-06 46.3 8.8 73 175-247 2-90 (256)
332 COG2519 GCD14 tRNA(1-methylade 95.4 0.16 3.4E-06 44.1 9.6 100 168-269 88-196 (256)
333 PRK08159 enoyl-(acyl carrier p 95.4 0.09 2E-06 47.0 8.7 97 174-270 9-150 (272)
334 PRK05653 fabG 3-ketoacyl-(acyl 95.4 0.13 2.7E-06 44.8 9.5 74 174-247 4-92 (246)
335 PRK03369 murD UDP-N-acetylmura 95.4 0.066 1.4E-06 52.2 8.3 73 171-248 8-81 (488)
336 PRK07984 enoyl-(acyl carrier p 95.4 0.091 2E-06 46.7 8.6 73 174-246 5-93 (262)
337 PRK07791 short chain dehydroge 95.4 0.11 2.4E-06 46.8 9.2 36 173-208 4-39 (286)
338 PRK08340 glucose-1-dehydrogena 95.4 0.1 2.2E-06 46.2 8.8 71 177-247 2-86 (259)
339 PRK06125 short chain dehydroge 95.3 0.092 2E-06 46.4 8.4 74 174-247 6-91 (259)
340 PRK12938 acetyacetyl-CoA reduc 95.3 0.14 3.1E-06 44.7 9.6 74 174-247 2-91 (246)
341 PRK06720 hypothetical protein; 95.3 0.13 2.7E-06 42.5 8.5 37 174-210 15-51 (169)
342 PRK08085 gluconate 5-dehydroge 95.3 0.1 2.2E-06 45.9 8.6 74 174-247 8-96 (254)
343 PRK00312 pcm protein-L-isoaspa 95.2 0.19 4.2E-06 43.0 9.9 96 168-268 72-175 (212)
344 KOG1200 Mitochondrial/plastidi 95.2 0.14 3E-06 42.6 8.2 73 175-247 14-100 (256)
345 PRK06124 gluconate 5-dehydroge 95.2 0.11 2.4E-06 45.7 8.6 74 174-247 10-98 (256)
346 PRK08278 short chain dehydroge 95.2 0.12 2.6E-06 46.2 8.8 36 174-209 5-40 (273)
347 PRK12936 3-ketoacyl-(acyl-carr 95.2 0.12 2.5E-06 45.1 8.6 74 174-247 5-90 (245)
348 COG1748 LYS9 Saccharopine dehy 95.2 0.13 2.7E-06 48.0 8.9 93 176-270 2-101 (389)
349 PLN00141 Tic62-NAD(P)-related 95.2 0.11 2.5E-06 45.6 8.5 97 173-270 15-133 (251)
350 PRK10538 malonic semialdehyde 95.2 0.1 2.2E-06 45.8 8.2 71 177-247 2-84 (248)
351 PRK07035 short chain dehydroge 95.2 0.11 2.4E-06 45.6 8.4 74 174-247 7-95 (252)
352 PRK15181 Vi polysaccharide bio 95.1 0.092 2E-06 48.8 8.1 85 160-246 1-99 (348)
353 PRK05884 short chain dehydroge 95.1 0.13 2.8E-06 44.4 8.5 70 177-246 2-78 (223)
354 PRK06953 short chain dehydroge 95.1 0.14 2.9E-06 44.1 8.7 72 176-247 2-80 (222)
355 PRK06914 short chain dehydroge 95.1 0.11 2.5E-06 46.3 8.5 73 175-247 3-91 (280)
356 PRK06171 sorbitol-6-phosphate 95.1 0.051 1.1E-06 48.2 6.1 72 174-247 8-87 (266)
357 PRK08277 D-mannonate oxidoredu 95.1 0.14 2.9E-06 45.8 8.9 74 174-247 9-97 (278)
358 PRK13581 D-3-phosphoglycerate 95.1 0.2 4.3E-06 49.3 10.7 88 174-269 139-231 (526)
359 COG2227 UbiG 2-polyprenyl-3-me 95.1 0.22 4.8E-06 42.9 9.5 92 173-269 58-162 (243)
360 PRK07574 formate dehydrogenase 95.1 0.24 5.2E-06 46.5 10.6 89 174-269 191-285 (385)
361 PF00106 adh_short: short chai 95.1 0.1 2.2E-06 42.5 7.4 73 176-248 1-91 (167)
362 PRK08416 7-alpha-hydroxysteroi 95.1 0.12 2.6E-06 45.7 8.4 35 174-208 7-41 (260)
363 PRK05875 short chain dehydroge 95.1 0.14 3.1E-06 45.6 8.9 37 174-210 6-42 (276)
364 PRK06482 short chain dehydroge 95.1 0.14 3.1E-06 45.6 8.9 72 176-247 3-86 (276)
365 PF01118 Semialdhyde_dh: Semia 95.0 0.12 2.5E-06 40.0 7.2 90 177-270 1-99 (121)
366 PF02670 DXP_reductoisom: 1-de 95.0 0.46 1E-05 37.0 10.3 90 178-267 1-120 (129)
367 PRK08213 gluconate 5-dehydroge 95.0 0.13 2.9E-06 45.3 8.5 74 174-247 11-99 (259)
368 PRK07666 fabG 3-ketoacyl-(acyl 95.0 0.13 2.8E-06 44.8 8.2 74 174-247 6-94 (239)
369 PLN00016 RNA-binding protein; 95.0 0.18 3.8E-06 47.5 9.6 95 174-270 51-166 (378)
370 PRK08264 short chain dehydroge 95.0 0.12 2.5E-06 45.0 7.9 72 174-247 5-83 (238)
371 PRK12384 sorbitol-6-phosphate 94.9 0.16 3.6E-06 44.7 8.9 36 175-210 2-37 (259)
372 KOG1502 Flavonol reductase/cin 94.9 0.16 3.5E-06 46.0 8.6 73 174-247 5-88 (327)
373 PRK07502 cyclohexadienyl dehyd 94.9 0.19 4.2E-06 45.8 9.4 90 176-270 7-102 (307)
374 TIGR00438 rrmJ cell division p 94.9 0.36 7.9E-06 40.4 10.5 96 169-269 27-147 (188)
375 PRK07069 short chain dehydroge 94.9 0.31 6.7E-06 42.6 10.5 31 178-208 2-32 (251)
376 PRK06719 precorrin-2 dehydroge 94.9 0.18 3.9E-06 41.0 8.2 87 174-267 12-99 (157)
377 PLN03075 nicotianamine synthas 94.9 0.25 5.5E-06 44.4 9.7 95 173-268 122-233 (296)
378 PRK07097 gluconate 5-dehydroge 94.9 0.16 3.5E-06 45.0 8.7 74 174-247 9-97 (265)
379 TIGR00507 aroE shikimate 5-deh 94.9 0.24 5.1E-06 44.3 9.7 93 171-269 113-215 (270)
380 PRK09135 pteridine reductase; 94.9 0.22 4.8E-06 43.4 9.5 36 174-209 5-40 (249)
381 PLN03139 formate dehydrogenase 94.9 0.25 5.5E-06 46.3 10.1 89 174-269 198-292 (386)
382 PRK12809 putative oxidoreducta 94.8 0.1 2.3E-06 52.7 8.1 73 174-248 309-406 (639)
383 PRK08945 putative oxoacyl-(acy 94.8 0.16 3.5E-06 44.4 8.5 39 172-210 9-47 (247)
384 PRK08703 short chain dehydroge 94.8 0.12 2.6E-06 45.0 7.5 38 174-211 5-42 (239)
385 PRK08251 short chain dehydroge 94.8 0.16 3.5E-06 44.4 8.4 36 175-210 2-37 (248)
386 PRK11579 putative oxidoreducta 94.8 1.2 2.6E-05 41.3 14.5 136 176-331 5-143 (346)
387 PLN02780 ketoreductase/ oxidor 94.8 0.12 2.6E-06 47.4 7.8 38 174-211 52-89 (320)
388 TIGR01777 yfcH conserved hypot 94.8 0.043 9.4E-07 49.3 4.8 66 178-247 1-67 (292)
389 PRK12747 short chain dehydroge 94.8 0.42 9.1E-06 41.9 11.0 33 174-206 3-35 (252)
390 PRK15409 bifunctional glyoxyla 94.8 0.26 5.7E-06 45.2 9.8 87 174-268 144-236 (323)
391 TIGR01289 LPOR light-dependent 94.8 0.18 4E-06 46.0 8.9 73 175-247 3-91 (314)
392 PRK13656 trans-2-enoyl-CoA red 94.7 0.22 4.9E-06 46.3 9.3 75 173-248 39-142 (398)
393 PRK07074 short chain dehydroge 94.7 0.23 5E-06 43.7 9.3 73 175-247 2-87 (257)
394 TIGR03206 benzo_BadH 2-hydroxy 94.7 0.21 4.5E-06 43.7 8.9 74 174-247 2-90 (250)
395 PRK07023 short chain dehydroge 94.7 0.3 6.4E-06 42.6 9.8 71 177-247 3-87 (243)
396 PRK14174 bifunctional 5,10-met 94.7 0.37 8E-06 43.3 10.3 96 153-270 137-237 (295)
397 cd05311 NAD_bind_2_malic_enz N 94.6 0.86 1.9E-05 39.5 12.3 90 173-269 23-129 (226)
398 PRK07792 fabG 3-ketoacyl-(acyl 94.6 0.22 4.7E-06 45.4 9.0 74 174-247 11-99 (306)
399 TIGR02622 CDP_4_6_dhtase CDP-g 94.6 0.19 4.2E-06 46.6 8.9 74 174-247 3-85 (349)
400 PRK12549 shikimate 5-dehydroge 94.6 0.31 6.7E-06 43.9 9.7 92 173-268 125-227 (284)
401 PRK09134 short chain dehydroge 94.6 0.3 6.5E-06 43.0 9.7 74 174-247 8-97 (258)
402 PRK07775 short chain dehydroge 94.6 0.28 6E-06 43.8 9.5 74 174-247 9-97 (274)
403 PRK08936 glucose-1-dehydrogena 94.6 0.22 4.7E-06 44.0 8.7 74 174-247 6-95 (261)
404 TIGR01327 PGDH D-3-phosphoglyc 94.6 0.32 7E-06 47.8 10.5 88 174-268 137-229 (525)
405 PRK08655 prephenate dehydrogen 94.6 0.29 6.2E-06 47.0 9.9 87 177-269 2-93 (437)
406 PRK06113 7-alpha-hydroxysteroi 94.5 0.21 4.7E-06 43.9 8.6 74 174-247 10-98 (255)
407 PRK06701 short chain dehydroge 94.5 0.23 4.9E-06 44.9 8.8 97 174-270 45-183 (290)
408 PRK08063 enoyl-(acyl carrier p 94.5 0.24 5.2E-06 43.3 8.8 74 174-247 3-92 (250)
409 PRK07402 precorrin-6B methylas 94.5 1 2.3E-05 37.9 12.4 102 166-269 32-143 (196)
410 PRK05557 fabG 3-ketoacyl-(acyl 94.5 0.33 7.2E-06 42.2 9.7 74 174-247 4-93 (248)
411 KOG1209 1-Acyl dihydroxyaceton 94.5 0.3 6.5E-06 41.2 8.4 75 174-248 6-92 (289)
412 TIGR01809 Shik-DH-AROM shikima 94.5 0.16 3.4E-06 45.7 7.5 73 174-248 124-201 (282)
413 KOG1252 Cystathionine beta-syn 94.4 0.11 2.5E-06 46.7 6.4 56 168-223 96-155 (362)
414 PLN02986 cinnamyl-alcohol dehy 94.4 0.21 4.6E-06 45.7 8.6 73 174-247 4-87 (322)
415 PRK14967 putative methyltransf 94.4 0.52 1.1E-05 40.7 10.5 94 169-268 31-159 (223)
416 PRK13403 ketol-acid reductoiso 94.4 0.52 1.1E-05 42.8 10.6 90 173-270 14-108 (335)
417 PRK08317 hypothetical protein; 94.4 0.25 5.4E-06 42.8 8.6 98 168-268 13-124 (241)
418 PRK07577 short chain dehydroge 94.4 0.22 4.7E-06 43.1 8.1 69 175-247 3-78 (234)
419 TIGR01829 AcAcCoA_reduct aceto 94.4 0.21 4.6E-06 43.3 8.1 32 176-207 1-32 (242)
420 PRK06997 enoyl-(acyl carrier p 94.4 0.2 4.3E-06 44.4 7.9 74 174-247 5-94 (260)
421 PLN02256 arogenate dehydrogena 94.4 0.66 1.4E-05 42.2 11.3 95 168-269 29-128 (304)
422 COG1052 LdhA Lactate dehydroge 94.3 0.41 8.9E-06 43.8 10.0 89 173-269 144-237 (324)
423 cd01075 NAD_bind_Leu_Phe_Val_D 94.3 0.91 2E-05 38.5 11.5 80 173-259 26-107 (200)
424 PRK06436 glycerate dehydrogena 94.3 0.29 6.3E-06 44.4 8.9 85 174-269 121-210 (303)
425 PRK14982 acyl-ACP reductase; P 94.3 0.25 5.5E-06 45.4 8.5 92 173-270 153-248 (340)
426 PRK07370 enoyl-(acyl carrier p 94.3 0.18 3.9E-06 44.6 7.5 97 174-270 5-149 (258)
427 KOG1210 Predicted 3-ketosphing 94.3 0.26 5.6E-06 44.1 8.2 78 171-248 29-123 (331)
428 PRK05447 1-deoxy-D-xylulose 5- 94.3 0.51 1.1E-05 43.9 10.5 93 176-268 2-122 (385)
429 PF10727 Rossmann-like: Rossma 94.3 0.14 2.9E-06 40.0 5.8 79 175-261 10-91 (127)
430 PF03435 Saccharop_dh: Sacchar 94.3 0.17 3.6E-06 47.8 7.6 89 178-268 1-98 (386)
431 PLN02657 3,8-divinyl protochlo 94.2 0.27 5.8E-06 46.5 9.0 101 170-270 55-183 (390)
432 PRK05650 short chain dehydroge 94.2 0.25 5.3E-06 44.0 8.3 71 177-247 2-87 (270)
433 KOG4022 Dihydropteridine reduc 94.2 0.48 1E-05 38.1 8.8 90 176-270 4-131 (236)
434 TIGR01532 E4PD_g-proteo D-eryt 94.2 0.23 4.9E-06 45.5 8.1 92 177-270 1-122 (325)
435 PRK08410 2-hydroxyacid dehydro 94.2 0.28 6.1E-06 44.7 8.7 85 174-269 144-233 (311)
436 TIGR03840 TMPT_Se_Te thiopurin 94.2 0.52 1.1E-05 40.4 9.8 95 172-269 32-153 (213)
437 PF08704 GCD14: tRNA methyltra 94.2 0.21 4.7E-06 43.7 7.5 102 167-270 33-148 (247)
438 PRK06487 glycerate dehydrogena 94.1 0.27 5.8E-06 45.0 8.4 82 174-268 147-233 (317)
439 PLN02214 cinnamoyl-CoA reducta 94.1 0.2 4.4E-06 46.4 7.7 96 173-269 8-127 (342)
440 PRK06932 glycerate dehydrogena 94.1 0.39 8.5E-06 43.9 9.4 84 174-269 146-234 (314)
441 PRK00436 argC N-acetyl-gamma-g 94.1 0.35 7.6E-06 44.8 9.1 93 176-270 3-101 (343)
442 PRK13255 thiopurine S-methyltr 94.0 0.51 1.1E-05 40.6 9.5 96 170-268 33-155 (218)
443 TIGR01963 PHB_DH 3-hydroxybuty 94.0 0.22 4.9E-06 43.6 7.6 73 175-247 1-88 (255)
444 COG4122 Predicted O-methyltran 94.0 0.61 1.3E-05 40.0 9.7 99 168-268 53-166 (219)
445 COG0027 PurT Formate-dependent 94.0 1.1 2.3E-05 40.2 11.2 93 174-268 11-105 (394)
446 PRK12935 acetoacetyl-CoA reduc 94.0 0.36 7.9E-06 42.1 8.8 74 174-247 5-94 (247)
447 TIGR01318 gltD_gamma_fam gluta 94.0 0.29 6.3E-06 47.5 8.8 73 174-248 140-237 (467)
448 PLN02695 GDP-D-mannose-3',5'-e 94.0 0.23 5E-06 46.5 7.9 73 173-246 19-94 (370)
449 PRK12548 shikimate 5-dehydroge 93.9 0.44 9.5E-06 43.0 9.3 94 173-268 124-236 (289)
450 PLN02989 cinnamyl-alcohol dehy 93.9 0.32 6.9E-06 44.6 8.6 73 174-247 4-87 (325)
451 TIGR02415 23BDH acetoin reduct 93.9 0.33 7.2E-06 42.5 8.4 72 176-247 1-87 (254)
452 cd05211 NAD_bind_Glu_Leu_Phe_V 93.9 0.53 1.1E-05 40.5 9.3 37 173-210 21-57 (217)
453 PRK14027 quinate/shikimate deh 93.9 0.52 1.1E-05 42.3 9.6 73 173-247 125-204 (283)
454 PRK14874 aspartate-semialdehyd 93.9 0.3 6.4E-06 45.1 8.3 89 176-269 2-95 (334)
455 COG0031 CysK Cysteine synthase 93.9 0.76 1.6E-05 41.3 10.4 56 168-224 55-114 (300)
456 TIGR03589 PseB UDP-N-acetylglu 93.9 0.4 8.6E-06 44.0 9.1 73 174-247 3-84 (324)
457 COG0686 Ald Alanine dehydrogen 93.9 0.31 6.8E-06 43.5 7.8 208 55-270 29-270 (371)
458 PRK05565 fabG 3-ketoacyl-(acyl 93.9 0.32 7E-06 42.3 8.2 73 175-247 5-93 (247)
459 PF02254 TrkA_N: TrkA-N domain 93.9 1.4 3.1E-05 33.4 10.9 90 178-269 1-97 (116)
460 PLN00203 glutamyl-tRNA reducta 93.8 0.6 1.3E-05 45.6 10.6 72 175-248 266-340 (519)
461 PRK08642 fabG 3-ketoacyl-(acyl 93.8 0.38 8.2E-06 42.1 8.7 73 175-247 5-91 (253)
462 PRK07340 ornithine cyclodeamin 93.8 0.49 1.1E-05 43.1 9.5 93 173-270 123-219 (304)
463 PF01210 NAD_Gly3P_dh_N: NAD-d 93.8 0.38 8.2E-06 39.1 7.9 81 177-260 1-91 (157)
464 PRK00107 gidB 16S rRNA methylt 93.8 0.87 1.9E-05 38.2 10.2 95 171-269 42-146 (187)
465 PRK06940 short chain dehydroge 93.8 0.67 1.4E-05 41.4 10.3 94 175-270 2-127 (275)
466 TIGR03649 ergot_EASG ergot alk 93.8 0.29 6.3E-06 43.9 7.9 91 177-269 1-105 (285)
467 PF01370 Epimerase: NAD depend 93.8 0.31 6.7E-06 42.1 7.9 70 178-247 1-75 (236)
468 PRK06550 fabG 3-ketoacyl-(acyl 93.8 0.32 6.9E-06 42.1 8.0 70 174-247 4-77 (235)
469 PRK05855 short chain dehydroge 93.7 0.29 6.4E-06 48.6 8.6 74 174-247 314-402 (582)
470 PRK12744 short chain dehydroge 93.7 0.44 9.6E-06 41.9 8.8 34 174-207 7-40 (257)
471 PF03446 NAD_binding_2: NAD bi 93.7 1.1 2.5E-05 36.5 10.6 87 177-270 3-96 (163)
472 COG0373 HemA Glutamyl-tRNA red 93.7 0.58 1.3E-05 44.0 9.7 93 173-270 176-276 (414)
473 PF01262 AlaDh_PNT_C: Alanine 93.7 0.31 6.8E-06 40.1 7.2 94 175-270 20-141 (168)
474 PRK08618 ornithine cyclodeamin 93.6 0.62 1.3E-05 42.8 9.9 91 173-270 125-223 (325)
475 COG0169 AroE Shikimate 5-dehyd 93.6 0.4 8.6E-06 42.9 8.3 91 173-268 124-226 (283)
476 PRK14618 NAD(P)H-dependent gly 93.6 0.6 1.3E-05 43.0 9.8 91 176-269 5-105 (328)
477 TIGR02632 RhaD_aldol-ADH rhamn 93.6 0.37 8E-06 49.1 9.0 74 174-247 413-503 (676)
478 PF02558 ApbA: Ketopantoate re 93.5 0.26 5.7E-06 39.5 6.5 90 178-269 1-102 (151)
479 TIGR01296 asd_B aspartate-semi 93.5 0.21 4.5E-06 46.2 6.4 88 177-268 1-92 (339)
480 PF03447 NAD_binding_3: Homose 93.4 0.17 3.8E-06 38.7 5.1 83 184-269 2-91 (117)
481 PF03807 F420_oxidored: NADP o 93.4 1.3 2.7E-05 32.4 9.6 84 177-267 1-93 (96)
482 PF07991 IlvN: Acetohydroxy ac 93.4 1.2 2.7E-05 36.0 9.9 89 174-270 3-97 (165)
483 PRK10258 biotin biosynthesis p 93.4 2.9 6.4E-05 36.7 13.6 96 170-269 38-141 (251)
484 PRK08219 short chain dehydroge 93.4 0.48 1E-05 40.6 8.4 71 176-247 4-81 (227)
485 PRK12480 D-lactate dehydrogena 93.4 0.86 1.9E-05 42.0 10.4 86 174-269 145-235 (330)
486 PRK05599 hypothetical protein; 93.4 0.38 8.2E-06 42.2 7.8 70 177-247 2-87 (246)
487 PRK10669 putative cation:proto 93.4 0.68 1.5E-05 46.0 10.4 92 176-268 418-515 (558)
488 PRK11207 tellurite resistance 93.4 0.62 1.3E-05 39.4 8.8 97 168-268 24-134 (197)
489 PRK12745 3-ketoacyl-(acyl-carr 93.4 0.49 1.1E-05 41.5 8.6 72 176-247 3-90 (256)
490 PRK06101 short chain dehydroge 93.3 0.35 7.7E-06 42.1 7.6 36 176-211 2-37 (240)
491 PRK05562 precorrin-2 dehydroge 93.3 0.91 2E-05 39.1 9.7 90 174-268 24-116 (223)
492 PRK12825 fabG 3-ketoacyl-(acyl 93.3 0.55 1.2E-05 40.7 8.8 73 175-247 6-94 (249)
493 PLN02366 spermidine synthase 93.3 2.8 6.2E-05 38.1 13.4 95 173-269 90-207 (308)
494 PRK08287 cobalt-precorrin-6Y C 93.3 1.2 2.6E-05 37.2 10.4 96 168-268 25-131 (187)
495 PRK08125 bifunctional UDP-gluc 93.3 0.33 7.2E-06 49.3 8.2 73 172-246 312-391 (660)
496 PLN00198 anthocyanidin reducta 93.3 0.45 9.8E-06 43.9 8.5 71 175-246 9-89 (338)
497 PRK05479 ketol-acid reductoiso 93.3 1 2.3E-05 41.2 10.5 88 174-269 16-109 (330)
498 PRK12859 3-ketoacyl-(acyl-carr 93.3 0.45 9.7E-06 41.9 8.1 33 174-206 5-39 (256)
499 PF01113 DapB_N: Dihydrodipico 93.2 1.4 3E-05 34.2 9.9 89 177-269 2-98 (124)
500 PTZ00098 phosphoethanolamine N 93.2 0.52 1.1E-05 41.9 8.5 102 166-269 44-157 (263)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=8.7e-59 Score=412.13 Aligned_cols=313 Identities=31% Similarity=0.438 Sum_probs=280.8
Q ss_pred ccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecC
Q 017901 26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA 105 (364)
Q Consensus 26 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~ 105 (364)
+.+|||+++.+++++ ++++ +++.|+|+|+||+|+|.|||+|+||++.++|. |....+|+++|||.+|+|+++|+
T Consensus 1 ~~~mkA~~~~~~~~p--l~i~-e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~---~~~~~~P~ipGHEivG~V~~vG~ 74 (339)
T COG1064 1 MMTMKAAVLKKFGQP--LEIE-EVPVPEPGPGEVLIKVEACGVCHTDLHVAKGD---WPVPKLPLIPGHEIVGTVVEVGE 74 (339)
T ss_pred CcceEEEEEccCCCC--ceEE-eccCCCCCCCeEEEEEEEEeecchhhhhhcCC---CCCCCCCccCCcceEEEEEEecC
Confidence 368999999999988 8999 99999999999999999999999999999997 44456999999999999999999
Q ss_pred CCCCCCCCCEEEE-ecC-----------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHH
Q 017901 106 SVRSLTVGQEVFG-ALH-----------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALT 161 (364)
Q Consensus 106 ~~~~~~~Gd~V~~-~~~-----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~t 161 (364)
+|+.|++||||.. ... .+..+|+|+||+++|+++++++|+++++.+||.+.|++.|
T Consensus 75 ~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT 154 (339)
T COG1064 75 GVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGIT 154 (339)
T ss_pred CCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeee
Confidence 9999999999987 221 1248999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccE
Q 017901 162 AWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDA 240 (364)
Q Consensus 162 a~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~ 240 (364)
.|++| ++.+++||++|+|.| .|++|++++|+|+++|++|+++++++++ +.++++|++++++.++.+..+.+++.+|+
T Consensus 155 ~y~al-k~~~~~pG~~V~I~G-~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ 232 (339)
T COG1064 155 TYRAL-KKANVKPGKWVAVVG-AGGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADA 232 (339)
T ss_pred Eeeeh-hhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcE
Confidence 99999 569999999999999 6799999999999999999999998886 88999999999998877777777755999
Q ss_pred EEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHH
Q 017901 241 VLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEE 320 (364)
Q Consensus 241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (364)
++|+++ +.++..++++|+++|+++.+|... ..+ ....+...+..+++++.|+... ++.++++
T Consensus 233 ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~-----------~~~-----~~~~~~~~li~~~~~i~GS~~g-~~~d~~e 294 (339)
T COG1064 233 IIDTVG-PATLEPSLKALRRGGTLVLVGLPG-----------GGP-----IPLLPAFLLILKEISIVGSLVG-TRADLEE 294 (339)
T ss_pred EEECCC-hhhHHHHHHHHhcCCEEEEECCCC-----------Ccc-----cCCCCHHHhhhcCeEEEEEecC-CHHHHHH
Confidence 999999 669999999999999999999761 001 1122333578899999999976 6899999
Q ss_pred HHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901 321 IRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD 364 (364)
Q Consensus 321 ~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~ 364 (364)
++++..+|+++|.+.+.++|+|+++||+.|++++..|++||++.
T Consensus 295 ~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 295 ALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred HHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 99999999999998789999999999999999999999999874
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=4e-52 Score=378.80 Aligned_cols=314 Identities=34% Similarity=0.534 Sum_probs=268.7
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|+++++.++++++.++++ +.|.|.|++|||+|||.|+|||+.|...+.|.. ....++|+++|.|++|+|+++|++++
T Consensus 1 mka~~~~~~g~~~~l~~~-e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~--~~~~~~P~i~G~d~aG~V~avG~~V~ 77 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVV-EVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLA--PPVRPLPFIPGSEAAGVVVAVGSGVT 77 (326)
T ss_pred CeEEEEeccCCCceeEEE-ecCCCCCCCCeEEEEEEEeecChHHHHhccCCC--CCCCCCCCcccceeEEEEEEeCCCCC
Confidence 789999999999889999 999999999999999999999999999999962 22346899999999999999999999
Q ss_pred CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHH
Q 017901 109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG 188 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G 188 (364)
.|++||||+.... ...+|+|+||+++|.+.++++|+++++++||+++++++|||+++....++++|++|||+||+|++|
T Consensus 78 ~~~~GdrV~~~~~-~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG 156 (326)
T COG0604 78 GFKVGDRVAALGG-VGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVG 156 (326)
T ss_pred CcCCCCEEEEccC-CCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHH
Confidence 9999999999851 003699999999999999999999999999999999999999999889999999999999999999
Q ss_pred HHHHHHHHHcCCeEEEeeCCc-cHHHHHHcCCceeeeCCChhHHHHhc----C-CccEEEECCCCchhHHHHHhhccCCC
Q 017901 189 FAAVQFSVASGCHVSATCGSK-SIDRVLAAGAEQAVDYSSKDIELAIK----G-KFDAVLDTIGAPETERLGLNFLKRGG 262 (364)
Q Consensus 189 ~~~~~~a~~~g~~vi~~~~~~-~~~~~~~~g~~~v~~~~~~~~~~~i~----g-~~D~vid~~g~~~~~~~~~~~l~~~G 262 (364)
++++|+||++|+.++++++++ +.++++++|++++++|.+.++.+.++ | ++|+|||++|++ .+..++++|+++|
T Consensus 157 ~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~-~~~~~l~~l~~~G 235 (326)
T COG0604 157 SAAIQLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGD-TFAASLAALAPGG 235 (326)
T ss_pred HHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHH-HHHHHHHHhccCC
Confidence 999999999997766665544 45789999999999999988888886 2 399999999998 9999999999999
Q ss_pred EEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC-----HHHHHHHHHHHHcCCceecccee
Q 017901 263 HYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD-----AEGLEEIRRLSETGKLKIPVDKT 337 (364)
Q Consensus 263 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~i~~~~~~~ 337 (364)
+++.+|...+ + + ...++...++.+.+...+...... .+.++++.+++.+|++++.+.++
T Consensus 236 ~lv~ig~~~g----------~-~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~ 299 (326)
T COG0604 236 RLVSIGALSG----------G-P-----PVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRV 299 (326)
T ss_pred EEEEEecCCC----------C-C-----ccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceeccE
Confidence 9999998621 0 1 111222345666777777665433 56788899999999999999999
Q ss_pred eccccHHHHHHHHhc-CCCCCeEEEEc
Q 017901 338 FHMTQVREAHEAKDK-RLIPGKVVLEF 363 (364)
Q Consensus 338 ~~l~~~~eA~~~~~~-~~~~gkvvi~~ 363 (364)
|||+|..+|..+... ++..||+|+++
T Consensus 300 ~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 300 YPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred echhhhHHHHHHHHcccCCcceEEEeC
Confidence 999996555554444 48889999974
No 3
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=7.8e-51 Score=337.25 Aligned_cols=317 Identities=28% Similarity=0.375 Sum_probs=273.0
Q ss_pred cccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeec
Q 017901 25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG 104 (364)
Q Consensus 25 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG 104 (364)
.|...+.++++++|+.++++++ +.|.|+|.|+|++||-.|+|+|.-|.....|.+. +.+.|++||.|++|+|+++|
T Consensus 5 ~p~~~k~i~v~e~Ggydvlk~e-d~pv~~papgel~iknka~GlNfid~y~RkGlY~---~~plPytpGmEaaGvVvAvG 80 (336)
T KOG1197|consen 5 SPPLLKCIVVTEFGGYDVLKLE-DRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD---PAPLPYTPGMEAAGVVVAVG 80 (336)
T ss_pred CCchheEEEEeccCCcceEEEe-eecCCCCCCCceEEeehhcCccHHHHHHhccccC---CCCCCcCCCcccceEEEEec
Confidence 4666789999999999999999 9999999999999999999999999999999753 45889999999999999999
Q ss_pred CCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCC
Q 017901 105 ASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGG 184 (364)
Q Consensus 105 ~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~ 184 (364)
++++++++||||....+ .|.|+++..+|...++++|+.+++.+||++...++|||.-+++..++++|++||++.|+
T Consensus 81 ~gvtdrkvGDrVayl~~----~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAA 156 (336)
T KOG1197|consen 81 EGVTDRKVGDRVAYLNP----FGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAA 156 (336)
T ss_pred CCccccccccEEEEecc----chhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEecc
Confidence 99999999999999875 69999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc------CCccEEEECCCCchhHHHHHhh
Q 017901 185 GAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK------GKFDAVLDTIGAPETERLGLNF 257 (364)
Q Consensus 185 g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~------g~~D~vid~~g~~~~~~~~~~~ 257 (364)
|++|++++|++|..|+++|++++.+++ +.+++.|++++++++.+|+.+++. | +|+++|.+|.+ ++...+.+
T Consensus 157 GGVGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKG-Vd~vyDsvG~d-t~~~sl~~ 234 (336)
T KOG1197|consen 157 GGVGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKG-VDAVYDSVGKD-TFAKSLAA 234 (336)
T ss_pred ccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCC-ceeeeccccch-hhHHHHHH
Confidence 999999999999999999999877665 889999999999999999999887 5 99999999998 99999999
Q ss_pred ccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC--HHHHHHHHHHHHcCCceeccc
Q 017901 258 LKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD--AEGLEEIRRLSETGKLKIPVD 335 (364)
Q Consensus 258 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~i~~~~~ 335 (364)
|++.|.+|++|...+ +. +|.+ ...++...+..-..+..|....+. .....+++.++.+|.+++.|.
T Consensus 235 Lk~~G~mVSfG~asg-------l~--~p~~---l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~ 302 (336)
T KOG1197|consen 235 LKPMGKMVSFGNASG-------LI--DPIP---LNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHID 302 (336)
T ss_pred hccCceEEEeccccC-------CC--CCee---hhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeee
Confidence 999999999997622 11 1111 111111112222222223221110 224566788888999999999
Q ss_pred eeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 336 KTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 336 ~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
++|||+++.+|+.+++++++.||+++.+
T Consensus 303 ~~ypls~vadA~~diesrktvGkvlLlp 330 (336)
T KOG1197|consen 303 HVYPLSKVADAHADIESRKTVGKVLLLP 330 (336)
T ss_pred eecchHHHHHHHHHHHhhhccceEEEeC
Confidence 9999999999999999999999999865
No 4
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.7e-51 Score=348.69 Aligned_cols=316 Identities=23% Similarity=0.258 Sum_probs=274.0
Q ss_pred cccccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEe
Q 017901 23 FLVTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAA 102 (364)
Q Consensus 23 ~~~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~ 102 (364)
..+|++.++|.+..+++...+++. ++++|+++++||+|+++|||||+||++.+.|. |....+|+++|||++|+|++
T Consensus 4 ~~~p~k~~g~~~~~~~G~l~p~~~-~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gd---wg~s~~PlV~GHEiaG~Vvk 79 (360)
T KOG0023|consen 4 MSIPEKQFGWAARDPSGVLSPEVF-SFPVREPGENDVLVKIEYCGVCHSDLHAWKGD---WGLSKYPLVPGHEIAGVVVK 79 (360)
T ss_pred ccCchhhEEEEEECCCCCCCccee-EcCCCCCCCCcEEEEEEEEeccchhHHHhhcc---CCcccCCccCCceeeEEEEE
Confidence 457899999999999997778889 99999999999999999999999999999996 44568999999999999999
Q ss_pred ecCCCCCCCCCCEEEEec-------------------------------CCCCCCCcceeEEeecCCccccCCCCCChhh
Q 017901 103 VGASVRSLTVGQEVFGAL-------------------------------HPTAVRGTYADYAVLSEDELTPKPVSVTHAD 151 (364)
Q Consensus 103 vG~~~~~~~~Gd~V~~~~-------------------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~ 151 (364)
+|++|++|++||||-.=. ..+-..|+||+|+++++..+++||+++++++
T Consensus 80 vGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~ 159 (360)
T KOG0023|consen 80 VGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLAS 159 (360)
T ss_pred ECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhh
Confidence 999999999999995310 0112567799999999999999999999999
Q ss_pred hccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--HHHHHHcCCceeeeCC-Ch
Q 017901 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAGAEQAVDYS-SK 228 (364)
Q Consensus 152 aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--~~~~~~~g~~~v~~~~-~~ 228 (364)
||.+.|++.|+|.+| ...++.||+++.|.|+ |++|.+++|+|+++|.+|+++.++.+ .+.++.+|++..++.. +.
T Consensus 160 aAPlLCaGITvYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~ 237 (360)
T KOG0023|consen 160 AAPLLCAGITVYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDP 237 (360)
T ss_pred ccchhhcceEEeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCH
Confidence 999999999999999 5688899999999995 55999999999999999999988753 3667889999988877 77
Q ss_pred hHHHHhcCCccEEEECCC--CchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeE
Q 017901 229 DIELAIKGKFDAVLDTIG--APETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDY 306 (364)
Q Consensus 229 ~~~~~i~g~~D~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (364)
++.+.+.+-.|.++|++. ....+..++.+++.+|++|++|.+.. .+.+..+.+..+.+.+
T Consensus 238 d~~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~------------------~~~~~~~~lil~~~~I 299 (360)
T KOG0023|consen 238 DIMKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEK------------------PLKLDTFPLILGRKSI 299 (360)
T ss_pred HHHHHHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCC------------------cccccchhhhcccEEE
Confidence 888877743677777776 55589999999999999999998611 2233334678889999
Q ss_pred EEEEeccCHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901 307 SYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD 364 (364)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~ 364 (364)
.|+... ++.+.++++++..++.+++.+. ..+++++++||+.+++++..+|.|+++.
T Consensus 300 ~GS~vG-~~ket~E~Ldf~a~~~ik~~IE-~v~~~~v~~a~erm~kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 300 KGSIVG-SRKETQEALDFVARGLIKSPIE-LVKLSEVNEAYERMEKGDVRYRFVVDVS 355 (360)
T ss_pred Eeeccc-cHHHHHHHHHHHHcCCCcCceE-EEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence 999987 6889999999999999988765 8999999999999999999999999863
No 5
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.8e-49 Score=337.52 Aligned_cols=312 Identities=23% Similarity=0.275 Sum_probs=260.1
Q ss_pred ccceeeEEecccCCCceEEEcccccCCCC-CCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeec
Q 017901 26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG 104 (364)
Q Consensus 26 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG 104 (364)
.++|+|+++. ++..++++ +.|.|++ .|+||+|++.++|||+||+|.|........-.+.|+++|||.+|+|.++|
T Consensus 2 ~~~~~A~vl~---g~~di~i~-~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG 77 (354)
T KOG0024|consen 2 AADNLALVLR---GKGDIRIE-QRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVG 77 (354)
T ss_pred CcccceeEEE---ccCceeEe-eCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhc
Confidence 5679999999 45558999 9999976 99999999999999999999997654333334689999999999999999
Q ss_pred CCCCCCCCCCEEEEecCC------------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHH
Q 017901 105 ASVRSLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAAL 160 (364)
Q Consensus 105 ~~~~~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ 160 (364)
++|+++++||||..-+.. .-.+|++++|++.+++.|+|+|++++++++|.+- ++.
T Consensus 78 ~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLs 156 (354)
T KOG0024|consen 78 DEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIE-PLS 156 (354)
T ss_pred ccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhccccc-chh
Confidence 999999999999764321 1367999999999999999999999999998884 377
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEee-CCccHHHHHHcCCceeeeCCCh----hHHHHh
Q 017901 161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATC-GSKSIDRVLAAGAEQAVDYSSK----DIELAI 234 (364)
Q Consensus 161 ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~-~~~~~~~~~~~g~~~v~~~~~~----~~~~~i 234 (364)
++|||. +++++++|++|||.| +|++|+++...|+.+|+ +|+.+. ...+++.++++|++.+.+.... ++.+.+
T Consensus 157 V~~HAc-r~~~vk~Gs~vLV~G-AGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v 234 (354)
T KOG0024|consen 157 VGVHAC-RRAGVKKGSKVLVLG-AGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELV 234 (354)
T ss_pred hhhhhh-hhcCcccCCeEEEEC-CcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHH
Confidence 999998 789999999999999 89999999999999999 566664 4445599999999987766553 233333
Q ss_pred c---C--CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEE
Q 017901 235 K---G--KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYI 309 (364)
Q Consensus 235 ~---g--~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (364)
. | .+|+.|||+|...+++.++.+++.+|+++..|.- .. ..+++......+++++.|.
T Consensus 235 ~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g--------------~~----~~~fpi~~v~~kE~~~~g~ 296 (354)
T KOG0024|consen 235 EKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMG--------------AE----EIQFPIIDVALKEVDLRGS 296 (354)
T ss_pred HhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccC--------------CC----ccccChhhhhhheeeeeee
Confidence 3 2 3899999999988999999999999999999853 11 2233344678899999998
Q ss_pred EeccCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCC-CeEEEEc
Q 017901 310 YMRADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIP-GKVVLEF 363 (364)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~-gkvvi~~ 363 (364)
+-+ ...++..+++++++|++++ ++|+.|+++++.|||+.+..++.. -|+++..
T Consensus 297 fry-~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~ 352 (354)
T KOG0024|consen 297 FRY-CNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITG 352 (354)
T ss_pred eee-ccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeC
Confidence 843 4668999999999999875 699999999999999998887753 3888875
No 6
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=2.4e-47 Score=331.54 Aligned_cols=310 Identities=26% Similarity=0.332 Sum_probs=264.8
Q ss_pred ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901 28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107 (364)
Q Consensus 28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 107 (364)
.++|++..+++.| +.++ ++.+++|++|||+||+.|+|+|+||.+..+|..|. .+|.++|||++|+|++||++|
T Consensus 2 k~~aAV~~~~~~P--l~i~-ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~----~~P~vLGHEgAGiVe~VG~gV 74 (366)
T COG1062 2 KTRAAVAREAGKP--LEIE-EVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPE----GFPAVLGHEGAGIVEAVGEGV 74 (366)
T ss_pred CceEeeeecCCCC--eEEE-EEecCCCCCCeEEEEEEEeeccccchhhhcCCCCC----CCceecccccccEEEEecCCc
Confidence 4789999998888 9999 99999999999999999999999999999996543 599999999999999999999
Q ss_pred CCCCCCCEEEEecCCC------------------------------------------C--CCCcceeEEeecCCccccC
Q 017901 108 RSLTVGQEVFGALHPT------------------------------------------A--VRGTYADYAVLSEDELTPK 143 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~~------------------------------------------~--~~g~~~~~~~~~~~~~~~i 143 (364)
+.+++||+|+...... . ..++|++|.+++..+++|+
T Consensus 75 t~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki 154 (366)
T COG1062 75 TSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKI 154 (366)
T ss_pred cccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEEC
Confidence 9999999998754310 1 2348999999999999999
Q ss_pred CCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCcc-HHHHHHcCCce
Q 017901 144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLAAGAEQ 221 (364)
Q Consensus 144 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~-~~~~~~~g~~~ 221 (364)
+++.+++.++.+.|..+|.+.+..+.+++++|+++.|.| .|++|++++|-|+..|+ ++|++..++. +++++++|+++
T Consensus 155 ~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~G-lGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~ 233 (366)
T COG1062 155 DPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG-LGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATH 233 (366)
T ss_pred CCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEe-ccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCce
Confidence 999999999999999999999988999999999999999 99999999999999999 7888866555 49999999999
Q ss_pred eeeCCCh-hHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhh
Q 017901 222 AVDYSSK-DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRM 296 (364)
Q Consensus 222 v~~~~~~-~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (364)
++|.++. ++.+.+. +.+|++|||+|+...+++++.++.++|+.+.+|.... +... +.+.
T Consensus 234 ~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~----------~~~i------~~~~ 297 (366)
T COG1062 234 FVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGA----------GQEI------STRP 297 (366)
T ss_pred eecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCC----------Ccee------ecCh
Confidence 9998876 4666554 2499999999999899999999999999999997621 1111 1111
Q ss_pred hhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 297 QTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 297 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
..+.. +.++.|++... -+.++..+++++.+|++.. ++++.++|||++|||+++.+++. -|.||.+
T Consensus 298 ~~lv~-gr~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~-IR~Vi~~ 366 (366)
T COG1062 298 FQLVT-GRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKS-IRSVIRF 366 (366)
T ss_pred HHeec-cceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCce-eeEEecC
Confidence 12333 37888887742 3679999999999999985 69999999999999999999987 4666653
No 7
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=2.6e-46 Score=350.13 Aligned_cols=311 Identities=24% Similarity=0.294 Sum_probs=261.9
Q ss_pred eeeEEecccCC------CceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEe
Q 017901 29 CRAVVLPRFGG------PEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAA 102 (364)
Q Consensus 29 ~~a~~~~~~g~------~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~ 102 (364)
|||+++.++|+ ++.++++ +.|.|.|+++||+||+.++|||++|++.+.|..+ ..+|+++|||++|+|++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~-~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~GhE~~G~V~~ 75 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIE-EVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP----RPLPMALGHEAAGVVVE 75 (371)
T ss_pred CcceEEEecccccccccCCCceEE-EeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC----CCCCccCCccceeEEEE
Confidence 79999999876 4789999 9999999999999999999999999999988642 25689999999999999
Q ss_pred ecCCCCCCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEeecCC
Q 017901 103 VGASVRSLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSED 138 (364)
Q Consensus 103 vG~~~~~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~ 138 (364)
+|+++++|++||||+...... ...|+|++|+.++.+
T Consensus 76 vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~ 155 (371)
T cd08281 76 VGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRR 155 (371)
T ss_pred eCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEeccc
Confidence 999999999999998742100 012799999999999
Q ss_pred ccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHH
Q 017901 139 ELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLA 216 (364)
Q Consensus 139 ~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~ 216 (364)
.++++|+++++++++.++++++|||+++.+.+.+++|++|+|.| +|++|++++|+|+..|+ +|+++.+++++ +.+++
T Consensus 156 ~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G-~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~ 234 (371)
T cd08281 156 SVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVG-LGGVGLSALLGAVAAGASQVVAVDLNEDKLALARE 234 (371)
T ss_pred ceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHH
Confidence 99999999999999999999999999987788999999999998 69999999999999999 68888766554 88899
Q ss_pred cCCceeeeCCChhHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHH
Q 017901 217 AGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLL 292 (364)
Q Consensus 217 ~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 292 (364)
+|+++++++.+.++.+.++ +++|++|||+|+...+..++++++++|+++.+|.... .. ..
T Consensus 235 ~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------------~~----~~ 298 (371)
T cd08281 235 LGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDP------------EA----RL 298 (371)
T ss_pred cCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCC------------Cc----ee
Confidence 9999999987776665554 2399999999987689999999999999999986411 00 01
Q ss_pred HHhhhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901 293 KKRMQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVL 361 (364)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi 361 (364)
.++...+..+++++.+++... ..++++++++++.+|++++ ++++.|+|+|+++||+.+.+++..+|+|+
T Consensus 299 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 299 SVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred eecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 112224677889998887532 2568899999999999975 58999999999999999999998877663
No 8
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=2.3e-45 Score=342.29 Aligned_cols=310 Identities=23% Similarity=0.306 Sum_probs=258.0
Q ss_pred ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901 28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107 (364)
Q Consensus 28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 107 (364)
|||++++.+++++ ++++ +.|.|.|+++||+||+.++|+|++|++.+.|..+ ..+|+++|||++|+|+++|+++
T Consensus 1 ~mka~~~~~~~~~--~~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v 73 (358)
T TIGR03451 1 TVRGVIARSKGAP--VELE-TIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN----DEFPFLLGHEAAGVVEAVGEGV 73 (358)
T ss_pred CcEEEEEccCCCC--CEEE-EEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc----ccCCcccccceEEEEEEeCCCC
Confidence 6999999998876 7888 9999999999999999999999999999988542 2578999999999999999999
Q ss_pred CCCCCCCEEEEecCC------------------------------C------CCCCcceeEEeecCCccccCCCCCChhh
Q 017901 108 RSLTVGQEVFGALHP------------------------------T------AVRGTYADYAVLSEDELTPKPVSVTHAD 151 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~------------------------------~------~~~g~~~~~~~~~~~~~~~ip~~~~~~~ 151 (364)
++|++||+|+..... + ..+|+|+||+.++.+.++++|+++++++
T Consensus 74 ~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~ 153 (358)
T TIGR03451 74 TDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAA 153 (358)
T ss_pred cccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhH
Confidence 999999999863210 0 1258999999999999999999999999
Q ss_pred hccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChh
Q 017901 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKD 229 (364)
Q Consensus 152 aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~ 229 (364)
++.+++.+.++|+++.+.+.+++|++|+|+| +|++|++++|+|+..|++ |+++.+++++ +.++++|+++++++.+.+
T Consensus 154 aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~ 232 (358)
T TIGR03451 154 AGLLGCGVMAGLGAAVNTGGVKRGDSVAVIG-CGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTD 232 (358)
T ss_pred hhhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcC
Confidence 9999999999999887778899999999998 699999999999999995 8888766554 888999999999987766
Q ss_pred HHHHhc----C-CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccce
Q 017901 230 IELAIK----G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGI 304 (364)
Q Consensus 230 ~~~~i~----g-~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (364)
+.+.+. + ++|++|||+|++..+..++++++++|+++.+|.... .. ...++...++.+++
T Consensus 233 ~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~------------~~----~~~~~~~~~~~~~~ 296 (358)
T TIGR03451 233 PVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTP------------DM----TLELPLLDVFGRGG 296 (358)
T ss_pred HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCC------------Cc----eeeccHHHHhhcCC
Confidence 655443 1 399999999986689999999999999999996511 00 01111224556788
Q ss_pred eEEEEEec--cCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 305 DYSYIYMR--ADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 305 ~~~~~~~~--~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
++.+++.. ...++++.+++++++|++++ .++++|+|+|+++||+.+.+++.. |+++.
T Consensus 297 ~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 297 ALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred EEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 88877642 13577899999999999975 589999999999999999888774 77764
No 9
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=3.3e-45 Score=339.10 Aligned_cols=306 Identities=26% Similarity=0.327 Sum_probs=255.7
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||+++.. ++.++++ +.|.|.|.++||+||+.++++|++|++.+.+.... +...|.++|||++|+|+++|++++
T Consensus 1 mka~~~~~---~~~l~~~-~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~ 74 (339)
T cd08239 1 MRGAVFPG---DRTVELR-EFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVT 74 (339)
T ss_pred CeEEEEec---CCceEEE-ecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCc
Confidence 78999984 4568999 99999999999999999999999999998775321 123578999999999999999999
Q ss_pred CCCCCCEEEEecCC------------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901 109 SLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 164 (364)
.|++||+|+..... ...+|+|++|+.++.+.++++|+++++++++.+++++.|||+
T Consensus 75 ~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~ 154 (339)
T cd08239 75 HFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYH 154 (339)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHH
Confidence 99999999876421 123699999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----C-C
Q 017901 165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----G-K 237 (364)
Q Consensus 165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g-~ 237 (364)
++ ....+++|++|+|+| +|.+|++++|+|+.+|++ |+++.+++++ +.++++|+++++++++.+ .+.+. + +
T Consensus 155 ~l-~~~~~~~g~~vlV~G-~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~-~~~~~~~~~~~~ 231 (339)
T cd08239 155 AL-RRVGVSGRDTVLVVG-AGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD-VQEIRELTSGAG 231 (339)
T ss_pred HH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcch-HHHHHHHhCCCC
Confidence 98 567899999999998 699999999999999998 9988766554 788999999999887654 33332 2 3
Q ss_pred ccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHH
Q 017901 238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEG 317 (364)
Q Consensus 238 ~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (364)
+|++|||+|+...+..++++++++|+++.+|.... ... .. ...++.+++++.+++.. +.++
T Consensus 232 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~~---~~----~~~~~~~~~~i~g~~~~-~~~~ 292 (339)
T cd08239 232 ADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGE-----------LTI---EV----SNDLIRKQRTLIGSWYF-SVPD 292 (339)
T ss_pred CCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCC-----------ccc---Cc----HHHHHhCCCEEEEEecC-CHHH
Confidence 99999999998667889999999999999986411 010 00 01356688899888764 4678
Q ss_pred HHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 318 LEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 318 ~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
++++++++.+|++++ .++++|+|+|+++||+.+.+++ .||+|+++
T Consensus 293 ~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 293 MEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred HHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 999999999999875 6899999999999999998876 59999975
No 10
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=4.6e-45 Score=339.82 Aligned_cols=311 Identities=18% Similarity=0.190 Sum_probs=250.6
Q ss_pred ccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecC
Q 017901 26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA 105 (364)
Q Consensus 26 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~ 105 (364)
|+.+.++.+.+ ....+++. +++.|.|+++||+|||.++|||++|++.+.|..+ ...+|.++|||++|+|+++|+
T Consensus 10 ~~~~~~~~~~~--~~~~l~~~-~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~---~~~~p~i~GhE~~G~V~~vG~ 83 (360)
T PLN02586 10 PQKAFGWAARD--PSGVLSPF-HFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWG---FTRYPIVPGHEIVGIVTKLGK 83 (360)
T ss_pred hhheeEEEecC--CCCCceEE-eecCCCCCCCeEEEEEEEecCChhhHhhhcCCcC---CCCCCccCCcceeEEEEEECC
Confidence 34455555554 44458888 8999999999999999999999999999988543 125689999999999999999
Q ss_pred CCCCCCCCCEEEEecC-------------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhcc
Q 017901 106 SVRSLTVGQEVFGALH-------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASA 154 (364)
Q Consensus 106 ~~~~~~~Gd~V~~~~~-------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~ 154 (364)
++++|++||+|+.... ....+|+|+||++++.+.++++|+++++++++.
T Consensus 84 ~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~ 163 (360)
T PLN02586 84 NVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAP 163 (360)
T ss_pred CCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhh
Confidence 9999999999974211 001269999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-H-HHHHHcCCceeeeCCChhHHH
Q 017901 155 IPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-I-DRVLAAGAEQAVDYSSKDIEL 232 (364)
Q Consensus 155 ~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~-~~~~~~g~~~v~~~~~~~~~~ 232 (364)
+++.+.|+|+++.....+++|++|+|.| +|++|++++|+|+.+|++|+++..+++ + +.++++|+++++++.+.+...
T Consensus 164 l~~~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~ 242 (360)
T PLN02586 164 LLCAGITVYSPMKYYGMTEPGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMK 242 (360)
T ss_pred hhcchHHHHHHHHHhcccCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHH
Confidence 9999999999986666778999999988 699999999999999999988865544 3 566899999998876542222
Q ss_pred HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEec
Q 017901 233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR 312 (364)
Q Consensus 233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (364)
...+.+|++||++|+...+..++++++++|+++.+|.... +. .++...++.++..+.+++..
T Consensus 243 ~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~------------~~------~~~~~~~~~~~~~i~g~~~~ 304 (360)
T PLN02586 243 AAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK------------PL------ELPIFPLVLGRKLVGGSDIG 304 (360)
T ss_pred hhcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC------------CC------ccCHHHHHhCCeEEEEcCcC
Confidence 2223399999999987688999999999999999986410 11 01111345566777776644
Q ss_pred cCHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 313 ADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 313 ~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
+..+++++++++++|++++.+ ++|+|+|+++||+.+.+++..||+|+++
T Consensus 305 -~~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 305 -GIKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred -CHHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 467899999999999998766 5899999999999999999889999875
No 11
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=4.7e-45 Score=338.23 Aligned_cols=305 Identities=20% Similarity=0.246 Sum_probs=247.5
Q ss_pred ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhc-cCCccccCCCCCcccccceeEEEEeecCC
Q 017901 28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRS-GYGRSIFEPLLPLILGRDISGEVAAVGAS 106 (364)
Q Consensus 28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~-g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 106 (364)
.++++++. +++.++++ +.+.| ++++||+|||.++|||++|++.+. |..+ .....+|+++|||++|+|+++ +
T Consensus 4 ~~~~~~~~---~~~~~~~~-~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~-~~~~~~p~v~GhE~~G~V~~v--~ 75 (343)
T PRK09880 4 KTQSCVVA---GKKDVAVT-EQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVG-NFVIKAPMVLGHEVIGKIVHS--D 75 (343)
T ss_pred cceEEEEe---cCCceEEE-ecCCC-CCCCeEEEEEEEEEECccccHhhccCCcc-cccccCCcccCcccEEEEEEe--c
Confidence 47889998 55568998 99887 689999999999999999999875 4321 112357999999999999999 7
Q ss_pred CCCCCCCCEEEEecCC----------------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccch
Q 017901 107 VRSLTVGQEVFGALHP----------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFA 158 (364)
Q Consensus 107 ~~~~~~Gd~V~~~~~~----------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 158 (364)
+++|++||||+..... ...+|+|+||++++.+.++++|+++++++++ +..+
T Consensus 76 v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~ 154 (343)
T PRK09880 76 SSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEP 154 (343)
T ss_pred CccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcH
Confidence 8899999999864210 0136999999999999999999999987655 4556
Q ss_pred HHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCcc-HHHHHHcCCceeeeCCChhHHHHhc-
Q 017901 159 ALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIK- 235 (364)
Q Consensus 159 ~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~i~- 235 (364)
+.+||+++. .....+|++|+|.| +|++|++++|+|+.+|+ +|+++.++++ ++.++++|+++++++++.++.+...
T Consensus 155 ~~~a~~al~-~~~~~~g~~VlV~G-~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~ 232 (343)
T PRK09880 155 LAVAIHAAH-QAGDLQGKRVFVSG-VGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAE 232 (343)
T ss_pred HHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhcc
Confidence 779999984 55667899999999 69999999999999999 6888876555 4889999999999987766544333
Q ss_pred -CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC
Q 017901 236 -GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD 314 (364)
Q Consensus 236 -g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (364)
|++|++|||+|++..+..++++++++|+++.+|.... .. +++...+..+++++.+++..
T Consensus 233 ~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------------~~------~~~~~~~~~k~~~i~g~~~~-- 292 (343)
T PRK09880 233 KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA------------PP------EFPMMTLIVKEISLKGSFRF-- 292 (343)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------------CC------ccCHHHHHhCCcEEEEEeec--
Confidence 3499999999987688999999999999999986410 11 11122456778888887743
Q ss_pred HHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 315 AEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 315 ~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
.++++++++++++|++++ .++++|+|+|+++||+.+.+++..||+++.+
T Consensus 293 ~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 293 TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 467899999999999986 5889999999999999999888789999975
No 12
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=3.3e-44 Score=335.09 Aligned_cols=309 Identities=18% Similarity=0.201 Sum_probs=250.8
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
.+|+.+...+.+..+... +++.|.|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus 5 ~~a~~~~~~~~~~~l~~~-~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~---~~~p~i~GhE~aG~Vv~vG~~v~ 80 (375)
T PLN02178 5 NKAFGWAANDESGVLSPF-HFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF---SRYPIIPGHEIVGIATKVGKNVT 80 (375)
T ss_pred ceeEEEEEccCCCCceEE-eecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC---CCCCcccCceeeEEEEEECCCCC
Confidence 345555545555568888 88889999999999999999999999999885421 24688999999999999999999
Q ss_pred CCCCCCEEEEecC-------------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccc
Q 017901 109 SLTVGQEVFGALH-------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPF 157 (364)
Q Consensus 109 ~~~~Gd~V~~~~~-------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~ 157 (364)
+|++||||..... ....+|+|+||++++.+.++++|+++++++++.+++
T Consensus 81 ~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~ 160 (375)
T PLN02178 81 KFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLC 160 (375)
T ss_pred ccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhc
Confidence 9999999974211 001269999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-c-HHHHHHcCCceeeeCCChh-HHHH
Q 017901 158 AALTAWRALKCAAR-MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-S-IDRVLAAGAEQAVDYSSKD-IELA 233 (364)
Q Consensus 158 ~~~ta~~~l~~~~~-~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-~-~~~~~~~g~~~v~~~~~~~-~~~~ 233 (364)
.+.|+|+++..... .++|++|+|.| +|++|++++|+|+.+|++|+++.+++ + .+.++++|+++++++.+.+ +.+.
T Consensus 161 ~~~ta~~al~~~~~~~~~g~~VlV~G-~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~ 239 (375)
T PLN02178 161 AGITVYSPMKYYGMTKESGKRLGVNG-LGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEA 239 (375)
T ss_pred cchHHHHHHHHhCCCCCCCCEEEEEc-ccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHh
Confidence 99999999854433 36899999998 69999999999999999999987654 3 3677899999998876532 2222
Q ss_pred hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc
Q 017901 234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA 313 (364)
Q Consensus 234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (364)
..+ +|++|||+|++..+..++++++++|+++.+|.... +. .++...+..+++++.+++..
T Consensus 240 ~~~-~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~------------~~------~~~~~~~~~~~~~i~g~~~~- 299 (375)
T PLN02178 240 VGT-MDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK------------PL------DLPIFPLVLGRKMVGGSQIG- 299 (375)
T ss_pred hCC-CcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC------------CC------ccCHHHHHhCCeEEEEeCcc-
Confidence 224 99999999987678999999999999999986410 11 11112455678888888754
Q ss_pred CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 314 DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 314 ~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
..+++.++++++.+|++++.+ +.|+|+|+++||+.+.+++..||+|+++
T Consensus 300 ~~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 300 GMKETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred CHHHHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 467899999999999998876 5799999999999999999889999875
No 13
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=1.7e-44 Score=304.93 Aligned_cols=318 Identities=24% Similarity=0.355 Sum_probs=269.4
Q ss_pred ecccccceeeEEecccCCC-ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEE
Q 017901 22 RFLVTTSCRAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEV 100 (364)
Q Consensus 22 ~~~~~~~~~a~~~~~~g~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V 100 (364)
.+.++...|+++|.+.|+| +.+++. +.++|+...++|+|+.+|++|||+|+..++|.+|. ++.+|.+-|+|++|+|
T Consensus 13 a~q~~~~~kalvY~~hgdP~kVlql~-~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpv--rP~~PAVgGnEGv~eV 89 (354)
T KOG0025|consen 13 ASQMPARSKALVYSEHGDPAKVLQLK-NLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPV--RPELPAVGGNEGVGEV 89 (354)
T ss_pred ccccccccceeeecccCCchhhheee-cccCCCCCCCceeeeeeecCCChHHhhhhccccCC--CCCCCcccCCcceEEE
Confidence 3447788899999999998 789999 99999988888999999999999999999998754 4467899999999999
Q ss_pred EeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEE
Q 017901 101 AAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLV 180 (364)
Q Consensus 101 ~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli 180 (364)
+.+|+++.+|++||+|+.... ..|.|++|.+.+++.++++++.++++.||++..+.+|||++|.+...+.+||+|+.
T Consensus 90 v~vGs~vkgfk~Gd~VIp~~a---~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQ 166 (354)
T KOG0025|consen 90 VAVGSNVKGFKPGDWVIPLSA---NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQ 166 (354)
T ss_pred EEecCCcCccCCCCeEeecCC---CCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeee
Confidence 999999999999999999887 45999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCchHHHHHHHHHHHcCCeEEEeeCCcc----H-HHHHHcCCceeeeCCC---hhHHHHhc--CCccEEEECCCCchh
Q 017901 181 LGGGGAVGFAAVQFSVASGCHVSATCGSKS----I-DRVLAAGAEQAVDYSS---KDIELAIK--GKFDAVLDTIGAPET 250 (364)
Q Consensus 181 ~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~----~-~~~~~~g~~~v~~~~~---~~~~~~i~--g~~D~vid~~g~~~~ 250 (364)
+||++.+|++.+|+|+++|.+-+.++|+.. . +.++++||++|+..+. .+...... .++.+.|+|+|+. +
T Consensus 167 NganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGk-s 245 (354)
T KOG0025|consen 167 NGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGK-S 245 (354)
T ss_pred cCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCch-h
Confidence 999999999999999999999999887643 2 5578899999985322 12222211 2489999999998 8
Q ss_pred HHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc------C----HHHHHH
Q 017901 251 ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA------D----AEGLEE 320 (364)
Q Consensus 251 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~ 320 (364)
.....+.|.+||+++++|+. +..|. ..+...++++++.+.|+++.. + .+.+.+
T Consensus 246 a~~iar~L~~GgtmvTYGGM-----------SkqPv------~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~ 308 (354)
T KOG0025|consen 246 ATEIARYLERGGTMVTYGGM-----------SKQPV------TVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDE 308 (354)
T ss_pred HHHHHHHHhcCceEEEecCc-----------cCCCc------ccccchheeccceeeeeeeeehhhccCCcHHHHHHHHH
Confidence 88999999999999999987 22332 223336899999999999821 1 246788
Q ss_pred HHHHHHcCCceeccceeeccccHHHHHHHHhcC-CCCCeEEEEc
Q 017901 321 IRRLSETGKLKIPVDKTFHMTQVREAHEAKDKR-LIPGKVVLEF 363 (364)
Q Consensus 321 ~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~-~~~gkvvi~~ 363 (364)
+.++++.|+|........+|++.+.|++...+. ...||-+|.+
T Consensus 309 ~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 309 LCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred HHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 899999999999888899999999999864443 3446777765
No 14
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=8.3e-44 Score=334.15 Aligned_cols=314 Identities=19% Similarity=0.247 Sum_probs=255.8
Q ss_pred ccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecC
Q 017901 26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA 105 (364)
Q Consensus 26 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~ 105 (364)
+.+||++++..++.+ +.++ +.+.|.|+++||+||+.++|||++|++.+.|..+. ...+|+++|||++|+|+++|+
T Consensus 8 ~~~mka~~~~~~~~~--~~~~-e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~--~~~~p~i~GhE~~G~V~~vG~ 82 (381)
T PLN02740 8 VITCKAAVAWGPGEP--LVME-EIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA--QRAYPRILGHEAAGIVESVGE 82 (381)
T ss_pred ceeeEEEEEecCCCC--cEEE-EeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcc--cCCCCccccccceEEEEEeCC
Confidence 457999999976644 7788 99999999999999999999999999999886421 225789999999999999999
Q ss_pred CCCCCCCCCEEEEecCCC-----------------------------------------------CCCCcceeEEeecCC
Q 017901 106 SVRSLTVGQEVFGALHPT-----------------------------------------------AVRGTYADYAVLSED 138 (364)
Q Consensus 106 ~~~~~~~Gd~V~~~~~~~-----------------------------------------------~~~g~~~~~~~~~~~ 138 (364)
+++.|++||||+...... ..+|+|+||++++.+
T Consensus 83 ~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~ 162 (381)
T PLN02740 83 GVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSA 162 (381)
T ss_pred CCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehH
Confidence 999999999998753110 015899999999999
Q ss_pred ccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCcc-HHHHHH
Q 017901 139 ELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLA 216 (364)
Q Consensus 139 ~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~-~~~~~~ 216 (364)
.++++|+++++++++.+++++.|||+++.+.+++++|++|+|+| +|++|++++|+|+.+|+ +|+++.++++ .+.+++
T Consensus 163 ~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G-~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~ 241 (381)
T PLN02740 163 CVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFG-LGAVGLAVAEGARARGASKIIGVDINPEKFEKGKE 241 (381)
T ss_pred HeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHH
Confidence 99999999999999999999999999887778999999999999 69999999999999999 6988876655 488899
Q ss_pred cCCceeeeCCCh--hHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhH
Q 017901 217 AGAEQAVDYSSK--DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATT 289 (364)
Q Consensus 217 ~g~~~v~~~~~~--~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 289 (364)
+|+++++++.+. ++.+.+. +.+|++|||+|++..+..++.+++++ |+++.+|.... +.
T Consensus 242 ~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~------------~~--- 306 (381)
T PLN02740 242 MGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPT------------PK--- 306 (381)
T ss_pred cCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCC------------Cc---
Confidence 999999987653 3444433 23999999999876899999999997 99999986511 10
Q ss_pred HHHHHhhhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 290 VLLKKRMQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
.+.+.... +.+++++.+++... ...++.++++++.++.+++ .++++|+|+|+++||+.+.+++. .|++|+.
T Consensus 307 -~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~ 381 (381)
T PLN02740 307 -MLPLHPME-LFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL 381 (381)
T ss_pred -eecccHHH-HhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence 00111111 23577888776532 2467899999999998865 58999999999999999988876 5999863
No 15
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2e-43 Score=328.72 Aligned_cols=311 Identities=19% Similarity=0.216 Sum_probs=255.6
Q ss_pred cceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901 27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS 106 (364)
Q Consensus 27 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 106 (364)
+.+++++++.+++. +.++ +++.|.|+++||+||+.+++||++|++.+.|..+. ..+|.++|||++|+|+++|++
T Consensus 8 ~~~~~~~~~~~~~~--~~~~-~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~E~~G~Vv~vG~~ 81 (357)
T PLN02514 8 KKTTGWAARDPSGH--LSPY-TYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM---SNYPMVPGHEVVGEVVEVGSD 81 (357)
T ss_pred ceEEEEEEecCCCC--ceEE-eecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCc---CCCCccCCceeeEEEEEECCC
Confidence 34889999988765 8888 99999999999999999999999999999885421 246889999999999999999
Q ss_pred CCCCCCCCEEEEecC-------------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccc
Q 017901 107 VRSLTVGQEVFGALH-------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAI 155 (364)
Q Consensus 107 ~~~~~~Gd~V~~~~~-------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~ 155 (364)
+++|++||+|+.... ....+|+|++|++++.+.++++|+++++.+++.+
T Consensus 82 v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l 161 (357)
T PLN02514 82 VSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPL 161 (357)
T ss_pred cccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhh
Confidence 999999999974210 0013599999999999999999999999999999
Q ss_pred cchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCceeeeCCChhHHHH
Q 017901 156 PFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELA 233 (364)
Q Consensus 156 ~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~ 233 (364)
++++.|||+++......++|++++|+| +|++|++++|+|+.+|++++++++++++ ..++++|+++++++.+.+....
T Consensus 162 ~~~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~ 240 (357)
T PLN02514 162 LCAGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQE 240 (357)
T ss_pred hhhHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHH
Confidence 999999999986666668999999997 7999999999999999999888766543 3456799988776654322222
Q ss_pred hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc
Q 017901 234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA 313 (364)
Q Consensus 234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (364)
..+.+|++|||+|....+..++++++++|+++.+|.... +. .+....++.+++++.+++..
T Consensus 241 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------------~~------~~~~~~~~~~~~~i~g~~~~- 301 (357)
T PLN02514 241 AADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT------------PL------QFVTPMLMLGRKVITGSFIG- 301 (357)
T ss_pred hcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC------------CC------cccHHHHhhCCcEEEEEecC-
Confidence 222399999999976688999999999999999997511 11 11112456778899888764
Q ss_pred CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901 314 DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD 364 (364)
Q Consensus 314 ~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~ 364 (364)
...+++++++++.+|++.+.+ +.|+|+|+++||+.+.+++..||+|++++
T Consensus 302 ~~~~~~~~~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~ 351 (357)
T PLN02514 302 SMKETEEMLEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVA 351 (357)
T ss_pred CHHHHHHHHHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence 567899999999999998766 58999999999999999998899999864
No 16
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=2.5e-43 Score=329.43 Aligned_cols=310 Identities=24% Similarity=0.305 Sum_probs=250.1
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
||++++..++.. ++++ +.|.|.|+++||+||+.++|||++|++.+.|..+. ..+|.++|||++|+|+++|++++
T Consensus 2 ~~a~~~~~~~~~--l~~~-~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~---~~~p~i~GhE~~G~V~~vG~~v~ 75 (368)
T TIGR02818 2 SRAAVAWAAGQP--LKIE-EVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE---GVFPVILGHEGAGIVEAVGEGVT 75 (368)
T ss_pred ceEEEEecCCCC--eEEE-EecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC---CCCCeeeccccEEEEEEECCCCc
Confidence 789998876654 8888 99999999999999999999999999999886432 25789999999999999999999
Q ss_pred CCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEeecCCccccCC
Q 017901 109 SLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSEDELTPKP 144 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~~~~~ip 144 (364)
+|++||||....... ...|+|+||+++|.+.++++|
T Consensus 76 ~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP 155 (368)
T TIGR02818 76 SVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKIN 155 (368)
T ss_pred cCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECC
Confidence 999999998753100 013799999999999999999
Q ss_pred CCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCcee
Q 017901 145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQA 222 (364)
Q Consensus 145 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v 222 (364)
+++++++++.+++++.|||+++.+.+++++|++|+|+| +|++|++++|+|+.+|+ +|+++.+++++ +.++++|++++
T Consensus 156 ~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~ 234 (368)
T TIGR02818 156 PAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFG-LGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDC 234 (368)
T ss_pred CCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeE
Confidence 99999999999999999999987788999999999998 69999999999999999 79998766554 88899999999
Q ss_pred eeCCC--hhHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhHHHHHHh
Q 017901 223 VDYSS--KDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATTVLLKKR 295 (364)
Q Consensus 223 ~~~~~--~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (364)
+++++ .++.+.+. +.+|++|||+|++..+..++++++++ |+++.+|.... +.... +.
T Consensus 235 i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~----------~~~~~------~~ 298 (368)
T TIGR02818 235 VNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGA----------GQEIS------TR 298 (368)
T ss_pred EcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCC----------CCccc------cc
Confidence 98763 23333332 23999999999876889999999986 99999986411 00110 00
Q ss_pred hhhhhccceeEEEEEec--cCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 296 MQTWYSYGIDYSYIYMR--ADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 296 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
...+.. +..+.+.... ....++.++++++.++++++ +++++|+|+|+++||+.+.+++. .|+++++
T Consensus 299 ~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 299 PFQLVT-GRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred HHHHhc-cceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 001222 2345554432 13567899999999999864 58999999999999999988765 7999875
No 17
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.7e-43 Score=329.91 Aligned_cols=309 Identities=18% Similarity=0.256 Sum_probs=254.5
Q ss_pred ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901 28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107 (364)
Q Consensus 28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 107 (364)
.||++++.+++ +.++++ +.|.|.|+++||+|||.++|||++|++.+.+.. .+|+++|||++|+|+++|+++
T Consensus 12 ~mka~~~~~~~--~~~~~~-e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~------~~p~i~GhE~~G~V~~vG~~v 82 (378)
T PLN02827 12 TCRAAVAWGAG--EALVME-EVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA------LFPRIFGHEASGIVESIGEGV 82 (378)
T ss_pred eeEEEEEecCC--CCceEE-EeecCCCCCCEEEEEEEEEecChhHHHHhcCCC------CCCeeecccceEEEEEcCCCC
Confidence 59999998654 348888 999999999999999999999999999987741 358899999999999999999
Q ss_pred CCCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEeecCCccccC
Q 017901 108 RSLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSEDELTPK 143 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~~~~~i 143 (364)
++|++||+|+...... ...|+|++|+.++.+.++++
T Consensus 83 ~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~i 162 (378)
T PLN02827 83 TEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 162 (378)
T ss_pred cccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEEC
Confidence 9999999999864210 01389999999999999999
Q ss_pred CCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCcc-HHHHHHcCCce
Q 017901 144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKS-IDRVLAAGAEQ 221 (364)
Q Consensus 144 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~-~~~~~~~g~~~ 221 (364)
|+++++++++.+.+++.++|+++.+.+++++|++|+|+| +|++|++++|+|+.+|++ |+++.++++ .+.++++|+++
T Consensus 163 P~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G-~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~ 241 (378)
T PLN02827 163 DPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFG-LGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTD 241 (378)
T ss_pred CCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcE
Confidence 999999999998888889998876778899999999998 699999999999999995 777765544 48889999999
Q ss_pred eeeCCC--hhHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhHHHHHH
Q 017901 222 AVDYSS--KDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATTVLLKK 294 (364)
Q Consensus 222 v~~~~~--~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (364)
++++++ .++.+.+. +.+|++|||+|....+..++++++++ |+++.+|.... .+. +..
T Consensus 242 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~-----------~~~-----~~~ 305 (378)
T PLN02827 242 FINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKA-----------KPE-----VSA 305 (378)
T ss_pred EEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCC-----------Ccc-----ccc
Confidence 998765 24444332 23999999999876789999999998 99999986511 010 000
Q ss_pred hhhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901 295 RMQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD 364 (364)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~ 364 (364)
...++.+++++.|++... ...++.++++++.+|++++ .++++|+|+|+++||+.+.+++. +|+||++.
T Consensus 306 -~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~ 377 (378)
T PLN02827 306 -HYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP 377 (378)
T ss_pred -cHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence 013456788888877532 2457889999999999998 68999999999999999998887 69999863
No 18
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.3e-43 Score=326.25 Aligned_cols=302 Identities=23% Similarity=0.238 Sum_probs=250.6
Q ss_pred eEEecccCCC--ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 31 AVVLPRFGGP--EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 31 a~~~~~~g~~--~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|+.+.++|++ ..++++ +.|.|.|+++||+||+.++|||++|++.+.|.++. ...|.++|||++|+|+++|++++
T Consensus 1 ~~~~~~~g~~~~~~l~~~-~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~ 76 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFV-ERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV---HRPRVTPGHEVVGEVAGRGADAG 76 (329)
T ss_pred CeeeecCCcCCCCCceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC---CCCCccCCcceEEEEEEECCCCc
Confidence 3566777765 569999 99999999999999999999999999999986432 13478999999999999999999
Q ss_pred CCCCCCEEEEecCC------------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901 109 SLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 164 (364)
+|++||+|+..... ...+|+|++|+.++.+.++++|+++++++++.+++.+.|||+
T Consensus 77 ~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~ 156 (329)
T TIGR02822 77 GFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYR 156 (329)
T ss_pred ccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHH
Confidence 99999999753110 013699999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEE
Q 017901 165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLD 243 (364)
Q Consensus 165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid 243 (364)
++ ..+++++|++|+|+| +|++|++++|+|+.+|++|+++.+++++ +.++++|+++++++.+.. -.+ +|++++
T Consensus 157 ~~-~~~~~~~g~~VlV~G-~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~----~~~-~d~~i~ 229 (329)
T TIGR02822 157 AL-LRASLPPGGRLGLYG-FGGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTP----PEP-LDAAIL 229 (329)
T ss_pred HH-HhcCCCCCCEEEEEc-CCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccC----ccc-ceEEEE
Confidence 98 468899999999999 5999999999999999999998776554 889999999998854321 114 899999
Q ss_pred CCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHH
Q 017901 244 TIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRR 323 (364)
Q Consensus 244 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (364)
+.+....+..++++++++|+++.+|.... ..+. +....+..+++++.+.+.. .++++.++++
T Consensus 230 ~~~~~~~~~~~~~~l~~~G~~v~~G~~~~----------~~~~-------~~~~~~~~~~~~i~g~~~~-~~~~~~~~~~ 291 (329)
T TIGR02822 230 FAPAGGLVPPALEALDRGGVLAVAGIHLT----------DTPP-------LNYQRHLFYERQIRSVTSN-TRADAREFLE 291 (329)
T ss_pred CCCcHHHHHHHHHhhCCCcEEEEEeccCc----------cCCC-------CCHHHHhhCCcEEEEeecC-CHHHHHHHHH
Confidence 98877789999999999999999986411 0000 1112345677888887643 5678889999
Q ss_pred HHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 324 LSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 324 ~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
++.+|++++ ++++|+|+|+++||+.+.+++..||+|+.
T Consensus 292 l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~ 329 (329)
T TIGR02822 292 LAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVLV 329 (329)
T ss_pred HHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEeC
Confidence 999999975 57899999999999999999999999873
No 19
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.4e-43 Score=303.09 Aligned_cols=314 Identities=22% Similarity=0.293 Sum_probs=264.2
Q ss_pred cccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeec
Q 017901 25 VTTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG 104 (364)
Q Consensus 25 ~~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG 104 (364)
.+.++||++.++++.| |.++ ++..++|+.+||+||++++++|+||.+.+.|.. ....+|.++|||++|+|+.+|
T Consensus 4 kvI~CKAAV~w~a~~P--L~IE-ei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~---~~~~fP~IlGHEaaGIVESvG 77 (375)
T KOG0022|consen 4 KVITCKAAVAWEAGKP--LVIE-EIEVAPPKAHEVRIKILATGVCHTDAYVWSGKD---PEGLFPVILGHEAAGIVESVG 77 (375)
T ss_pred CceEEeEeeeccCCCC--eeEE-EEEeCCCCCceEEEEEEEEeeccccceeecCCC---ccccCceEecccceeEEEEec
Confidence 3568999999999988 9999 999999999999999999999999999999963 345789999999999999999
Q ss_pred CCCCCCCCCCEEEEecCC-------------------------------------------CC--CCCcceeEEeecCCc
Q 017901 105 ASVRSLTVGQEVFGALHP-------------------------------------------TA--VRGTYADYAVLSEDE 139 (364)
Q Consensus 105 ~~~~~~~~Gd~V~~~~~~-------------------------------------------~~--~~g~~~~~~~~~~~~ 139 (364)
.+|+.+++||+|+..... ++ .-.+|+||.+++...
T Consensus 78 egV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~ 157 (375)
T KOG0022|consen 78 EGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDIS 157 (375)
T ss_pred CCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecce
Confidence 999999999999865421 01 224799999999999
Q ss_pred cccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHc
Q 017901 140 LTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAA 217 (364)
Q Consensus 140 ~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~ 217 (364)
+++|++..+++.++++.|...|+|.|..+.+.+++|+++.|.| .|.+|+++++-||+.|| ++|++.-++++ +.++++
T Consensus 158 v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfG-LG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~f 236 (375)
T KOG0022|consen 158 VAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFG-LGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEF 236 (375)
T ss_pred eEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEe-cchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhc
Confidence 9999999999999999999999999998999999999999999 99999999999999999 89999766665 899999
Q ss_pred CCceeeeCCCh--hHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhHH
Q 017901 218 GAEQAVDYSSK--DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATTV 290 (364)
Q Consensus 218 g~~~v~~~~~~--~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~ 290 (364)
|+++.+|..+. .+.+.+. |.+|+-|||+|+..++.+++.+...| |+-|.+|.... +...
T Consensus 237 GaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~----------~~~i---- 302 (375)
T KOG0022|consen 237 GATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAA----------GQEI---- 302 (375)
T ss_pred CcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCC----------Cccc----
Confidence 99999998732 2334333 34999999999998999999999999 99999997511 1111
Q ss_pred HHHHhhhhhhccceeEEEEEe--ccCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 291 LLKKRMQTWYSYGIDYSYIYM--RADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
+... .....+..+.|... ...++++..+.+.+.++++.. .+++.+||+++++||+.|.+++.. |.|+.+
T Consensus 303 --~~~p-~~l~~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~~ 375 (375)
T KOG0022|consen 303 --STRP-FQLVTGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLWM 375 (375)
T ss_pred --ccch-hhhccccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEeC
Confidence 1111 12233555555544 235889999999999998875 599999999999999999999985 777754
No 20
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=4.2e-43 Score=322.95 Aligned_cols=307 Identities=25% Similarity=0.290 Sum_probs=253.6
Q ss_pred eeeEEecccCCC---ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecC
Q 017901 29 CRAVVLPRFGGP---EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA 105 (364)
Q Consensus 29 ~~a~~~~~~g~~---~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~ 105 (364)
||++++.+++++ +.+++. +.|.|.|+++||+||+.++|+|++|++.+.|..+. ...+|.++|||++|+|+++|+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~-~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~--~~~~p~v~G~e~~G~V~~vG~ 77 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLP-EPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS--TKALPVPPGFEGSGTVVAAGG 77 (324)
T ss_pred CeEEEEeecCCCccccEEEec-ccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCcCCCcceEEEEEEECC
Confidence 789999988876 678999 99999999999999999999999999999886532 225688999999999999999
Q ss_pred CCCC-CCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEE-cC
Q 017901 106 SVRS-LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVL-GG 183 (364)
Q Consensus 106 ~~~~-~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~-g~ 183 (364)
++++ |++||+|++... .+|+|++|+.++.+.++++|+++++.+++.+++.+.|||.++ ..... +++.++|+ ++
T Consensus 78 ~v~~~~~vGd~V~~~~~---~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g 152 (324)
T cd08291 78 GPLAQSLIGKRVAFLAG---SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTAA 152 (324)
T ss_pred CccccCCCCCEEEecCC---CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccC
Confidence 9996 999999998653 148999999999999999999999999998888889998654 55555 45556565 77
Q ss_pred CchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhh
Q 017901 184 GGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNF 257 (364)
Q Consensus 184 ~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~ 257 (364)
+|.+|++++|+|+.+|++|+++++++++ +.++++|++++++++..++.+.++ .++|++|||+|+. .....+++
T Consensus 153 ~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~~ 231 (324)
T cd08291 153 ASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGG-LTGQILLA 231 (324)
T ss_pred ccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcH-HHHHHHHh
Confidence 9999999999999999999999776655 788999999999988776665553 1399999999997 77888999
Q ss_pred ccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-----CHHHHHHHHHHHHcCCcee
Q 017901 258 LKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-----DAEGLEEIRRLSETGKLKI 332 (364)
Q Consensus 258 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~i~~ 332 (364)
++++|+++.+|.... .... .++......+++++.+++... ..+.+++++++++ +.+++
T Consensus 232 l~~~G~~v~~g~~~~-----------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 294 (324)
T cd08291 232 MPYGSTLYVYGYLSG-----------KLDE-----PIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKT 294 (324)
T ss_pred hCCCCEEEEEEecCC-----------CCcc-----cCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Ccccc
Confidence 999999999986411 0100 011113456788888876531 2457888899988 89999
Q ss_pred ccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901 333 PVDKTFHMTQVREAHEAKDKRLIPGKVVL 361 (364)
Q Consensus 333 ~~~~~~~l~~~~eA~~~~~~~~~~gkvvi 361 (364)
.++++|+|+|+++||+.+.+++..||+++
T Consensus 295 ~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~ 323 (324)
T cd08291 295 TFASRYPLALTLEAIAFYSKNMSTGKKLL 323 (324)
T ss_pred ceeeEEcHHHHHHHHHHHHhCCCCCeEEe
Confidence 99999999999999999999998999987
No 21
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=9.9e-43 Score=325.95 Aligned_cols=309 Identities=19% Similarity=0.260 Sum_probs=254.2
Q ss_pred ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901 28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107 (364)
Q Consensus 28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 107 (364)
+|||+++.+++.+ ++++ +.+.|+|+++||+||+.++|||++|++.+.|..+ ...+|.++|||++|+|+++|+++
T Consensus 2 ~~ka~~~~~~~~~--~~l~-~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v 75 (369)
T cd08301 2 TCKAAVAWEAGKP--LVIE-EVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ---TPLFPRILGHEAAGIVESVGEGV 75 (369)
T ss_pred ccEEEEEecCCCC--cEEE-EeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC---CCCCCcccccccceEEEEeCCCC
Confidence 7899999977655 8888 9999999999999999999999999999988643 23578999999999999999999
Q ss_pred CCCCCCCEEEEecCCC---------------------------------------------CCCCcceeEEeecCCcccc
Q 017901 108 RSLTVGQEVFGALHPT---------------------------------------------AVRGTYADYAVLSEDELTP 142 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~~---------------------------------------------~~~g~~~~~~~~~~~~~~~ 142 (364)
++|++||||+...... ...|+|+||+.++.+.+++
T Consensus 76 ~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ 155 (369)
T cd08301 76 TDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAK 155 (369)
T ss_pred CccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEE
Confidence 9999999999753100 0237899999999999999
Q ss_pred CCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCc
Q 017901 143 KPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAE 220 (364)
Q Consensus 143 ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~ 220 (364)
+|+++++++++.+++++.|||+++.+..++++|++|+|+| +|.+|++++|+|+.+|+ +|+++.+++++ +.++++|++
T Consensus 156 iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~ 234 (369)
T cd08301 156 INPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFG-LGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVT 234 (369)
T ss_pred CCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc
Confidence 9999999999999999999999887778999999999998 69999999999999999 79999776655 888999999
Q ss_pred eeeeCCC--hhHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhHHHHH
Q 017901 221 QAVDYSS--KDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATTVLLK 293 (364)
Q Consensus 221 ~v~~~~~--~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (364)
.++++.. .++.+.++ +.+|++|||+|+...+..++++++++ |+++.+|.... +. .++
T Consensus 235 ~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~------------~~----~~~ 298 (369)
T cd08301 235 EFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHK------------DA----VFS 298 (369)
T ss_pred eEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCC------------Cc----ccc
Confidence 8888764 23443332 33999999999876789999999996 99999997511 00 011
Q ss_pred HhhhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901 294 KRMQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVL 361 (364)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi 361 (364)
+....+ .+++++.+++... .+.+++++++++.++.+++ .++++|+|+|+++||+.+.+++. .|+++
T Consensus 299 ~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~~ 368 (369)
T cd08301 299 THPMNL-LNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGEC-LRCIL 368 (369)
T ss_pred cCHHHH-hcCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCc-eeEEe
Confidence 111112 3578888876532 2457899999999998865 48899999999999999999887 58886
No 22
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=7.8e-43 Score=318.32 Aligned_cols=298 Identities=19% Similarity=0.217 Sum_probs=231.9
Q ss_pred ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecC-hhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901 28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSIN-PLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS 106 (364)
Q Consensus 28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~-~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 106 (364)
+||++++. +++.++++ +.+.|+|+++||+||+.++||| ++|++.+.|..+......+|+++|||++|+|+++|++
T Consensus 1 ~~ka~~~~---~~~~l~~~-e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~ 76 (308)
T TIGR01202 1 KTQAIVLS---GPNQIELR-EVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPD 76 (308)
T ss_pred CceEEEEe---CCCeEEEE-EecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCC
Confidence 47899998 45568999 9999999999999999999996 7999999887543221357999999999999999999
Q ss_pred CCCCCCCCEEEEecCCC-----CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEE
Q 017901 107 VRSLTVGQEVFGALHPT-----AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVL 181 (364)
Q Consensus 107 ~~~~~~Gd~V~~~~~~~-----~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~ 181 (364)
+ .|++||||+...... ...|+|+||++++.+.++++|++++++. +.+. .+.|||+++.+ . ..++++++|+
T Consensus 77 v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~ 151 (308)
T TIGR01202 77 T-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIV 151 (308)
T ss_pred C-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEE
Confidence 8 599999999743211 1259999999999999999999999864 4443 46899999844 3 3468899999
Q ss_pred cCCchHHHHHHHHHHHcCCeEEEeeC-CccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHHHHhhcc
Q 017901 182 GGGGAVGFAAVQFSVASGCHVSATCG-SKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLK 259 (364)
Q Consensus 182 g~~g~~G~~~~~~a~~~g~~vi~~~~-~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~ 259 (364)
| +|++|++++|+|+.+|++++++++ .+++ +.+. ...++|+.+. .-.+ +|++|||+|++..+..++++++
T Consensus 152 G-~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~---~~~~i~~~~~----~~~g-~Dvvid~~G~~~~~~~~~~~l~ 222 (308)
T TIGR01202 152 G-HGTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT---GYEVLDPEKD----PRRD-YRAIYDASGDPSLIDTLVRRLA 222 (308)
T ss_pred C-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh---hccccChhhc----cCCC-CCEEEECCCCHHHHHHHHHhhh
Confidence 8 799999999999999998665543 3222 3332 3345554321 1124 9999999999767899999999
Q ss_pred CCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCcee--cccee
Q 017901 260 RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKI--PVDKT 337 (364)
Q Consensus 260 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~ 337 (364)
++|+++.+|.... +. .+++..++.+++++.++... ..++++++++++++|++++ .+++.
T Consensus 223 ~~G~iv~~G~~~~------------~~------~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~~g~i~~~~~it~~ 283 (308)
T TIGR01202 223 KGGEIVLAGFYTE------------PV------NFDFVPAFMKEARLRIAAEW-QPGDLHAVRELIESGALSLDGLITHQ 283 (308)
T ss_pred cCcEEEEEeecCC------------Cc------ccccchhhhcceEEEEeccc-chhHHHHHHHHHHcCCCChhhcccee
Confidence 9999999986511 11 11222355677888876643 4678999999999999986 58999
Q ss_pred eccccHHHHHHHHhcCCCCCeEEEE
Q 017901 338 FHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 338 ~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
|+|+|+++||+.+.++...+|++++
T Consensus 284 ~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 284 RPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred ecHHHHHHHHHHHhcCcCceEEEeC
Confidence 9999999999988777667899874
No 23
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=1.1e-42 Score=324.04 Aligned_cols=312 Identities=21% Similarity=0.220 Sum_probs=238.3
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
||+++++.. +++ ++++ +.|.|+|+++||+||+.|+|||++|++.+.|..+......+|.++|||++|+|+++|++ +
T Consensus 1 mka~~~~~~-~~~-l~~~-~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~ 76 (355)
T cd08230 1 MKAIAVKPG-KPG-VRVV-DIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-S 76 (355)
T ss_pred CceeEecCC-CCC-CeEE-eCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-C
Confidence 688888843 333 8999 99999999999999999999999999999986433222346899999999999999999 9
Q ss_pred CCCCCCEEEEecCCC--------------------------CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHH
Q 017901 109 SLTVGQEVFGALHPT--------------------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTA 162 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~~--------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta 162 (364)
.|++||||+...... ..+|+|+||++++.+.++++|++++ +++++..++.++
T Consensus 77 ~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~~ 154 (355)
T cd08230 77 GLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSVV 154 (355)
T ss_pred CCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC--cceeecchHHHH
Confidence 999999998753210 1358999999999999999999999 344454555555
Q ss_pred HHHHHH------hcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC----CccHHHHHHcCCceeeeCCChhHHH
Q 017901 163 WRALKC------AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG----SKSIDRVLAAGAEQAVDYSSKDIEL 232 (364)
Q Consensus 163 ~~~l~~------~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~----~~~~~~~~~~g~~~v~~~~~~~~~~ 232 (364)
++++.. ....++|++|+|.| +|++|++++|+|+..|++|+++.+ +++++.++++|++. +++.+.++.+
T Consensus 155 ~~a~~~~~~~~~~~~~~~g~~vlI~G-~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~~~~ 232 (355)
T cd08230 155 EKAIEQAEAVQKRLPTWNPRRALVLG-AGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-VNSSKTPVAE 232 (355)
T ss_pred HHHHHHHhhhhhhcccCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-ecCCccchhh
Confidence 544322 22357899999998 699999999999999999999876 23347889999986 4555544332
Q ss_pred -HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEe
Q 017901 233 -AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYM 311 (364)
Q Consensus 233 -~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (364)
...+++|+||||+|++..+..++++++++|+++.+|.... ..+. .+..... ...++.+++++.+++.
T Consensus 233 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~----------~~~~-~~~~~~~-~~~~~~k~~~i~g~~~ 300 (355)
T cd08230 233 VKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGG----------GREF-EVDGGEL-NRDLVLGNKALVGSVN 300 (355)
T ss_pred hhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCC----------CCcc-ccChhhh-hhhHhhcCcEEEEecC
Confidence 1112399999999987688999999999999999997511 0010 0000000 1246778999999865
Q ss_pred ccCHHHHHHHHHHHHcCC------ceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 312 RADAEGLEEIRRLSETGK------LKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 312 ~~~~~~~~~~~~~~~~g~------i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
. +.++++++++++.++. +++.++++|+|+|+++||+.+.++. +|+|++|
T Consensus 301 ~-~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 301 A-NKRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred C-chhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 4 4677888999998776 5556899999999999999887554 5999875
No 24
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=3.2e-42 Score=322.22 Aligned_cols=310 Identities=23% Similarity=0.318 Sum_probs=250.2
Q ss_pred ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901 28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107 (364)
Q Consensus 28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 107 (364)
+||++++.+++++ ++++ +.|.|.|+++||+||++++|||++|++.+.|..+. ..+|+++|||++|+|+++|+++
T Consensus 2 ~~~a~~~~~~~~~--~~~~-~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~~G~V~~vG~~v 75 (368)
T cd08300 2 TCKAAVAWEAGKP--LSIE-EVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE---GLFPVILGHEGAGIVESVGEGV 75 (368)
T ss_pred cceEEEEecCCCC--cEEE-EeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc---CCCCceeccceeEEEEEeCCCC
Confidence 6899998876654 8888 99999999999999999999999999999886432 2578999999999999999999
Q ss_pred CCCCCCCEEEEecCCC--------------------------------------------CCCCcceeEEeecCCccccC
Q 017901 108 RSLTVGQEVFGALHPT--------------------------------------------AVRGTYADYAVLSEDELTPK 143 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~~--------------------------------------------~~~g~~~~~~~~~~~~~~~i 143 (364)
++|++||+|+...... ...|+|+||+.++.+.++++
T Consensus 76 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i 155 (368)
T cd08300 76 TSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKI 155 (368)
T ss_pred ccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeC
Confidence 9999999998752100 01368999999999999999
Q ss_pred CCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCce
Q 017901 144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQ 221 (364)
Q Consensus 144 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~ 221 (364)
|+++++++++.+++++.|||+++.+.+.+++|++|+|+| +|++|++++|+|+.+|+ +|+++.+++++ +.++++|+++
T Consensus 156 P~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G-~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~ 234 (368)
T cd08300 156 NPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFG-LGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATD 234 (368)
T ss_pred CCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCE
Confidence 999999999999999999999987778999999999998 69999999999999999 69988776655 7889999999
Q ss_pred eeeCCCh--hHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhHHHHHH
Q 017901 222 AVDYSSK--DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATTVLLKK 294 (364)
Q Consensus 222 v~~~~~~--~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (364)
++++.+. ++.+.+. +++|+||||+|+...+..++++++++ |+++.+|.... +.... ....
T Consensus 235 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~----------~~~~~-~~~~-- 301 (368)
T cd08300 235 CVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAA----------GQEIS-TRPF-- 301 (368)
T ss_pred EEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCC----------CCccc-cCHH--
Confidence 9987653 3444432 23999999999866899999999987 99999986411 00110 0010
Q ss_pred hhhhhhccceeEEEEEe--ccCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 295 RMQTWYSYGIDYSYIYM--RADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 295 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
.+. .+..+.++.. ....+++.++++++.++++++ .++++|+|+|+++||+.+.+++. .|++++
T Consensus 302 ---~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 302 ---QLV-TGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred ---HHh-hcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 111 1234444433 224678899999999999985 58999999999999999988775 698875
No 25
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=8.6e-42 Score=317.13 Aligned_cols=310 Identities=22% Similarity=0.311 Sum_probs=246.1
Q ss_pred eeeEEecccCCCceEEEcccccCCCC-CCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 107 (364)
||++++.+++ .+++. +.|.|.| .++||+||+.++++|++|++.+.... ...+|.++|||++|+|+++|+++
T Consensus 1 Mka~~~~~~~---~~~~~-~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~----~~~~p~i~G~e~~G~V~~vG~~v 72 (347)
T PRK10309 1 MKSVVNDTDG---IVRVA-ESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG----AHYYPITLGHEFSGYVEAVGSGV 72 (347)
T ss_pred CceEEEeCCC---ceEEE-ECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC----CCCCCcccccceEEEEEEeCCCC
Confidence 7899998654 48888 9999987 59999999999999999997543211 01357899999999999999999
Q ss_pred CCCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901 108 RSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 164 (364)
++|++||+|+..... ...+|+|++|+.++.+.++++|+++++++++.+. +..++|+
T Consensus 73 ~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~ 151 (347)
T PRK10309 73 DDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLH 151 (347)
T ss_pred CCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHH
Confidence 999999999986311 0136999999999999999999999999988773 3456788
Q ss_pred HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhH---HHHhc-CCc
Q 017901 165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDI---ELAIK-GKF 238 (364)
Q Consensus 165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~---~~~i~-g~~ 238 (364)
++ +...+++|++|+|+| +|.+|++++|+|+.+|++ |+++.+++++ +.++++|++++++++..+. .+... +++
T Consensus 152 ~~-~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~ 229 (347)
T PRK10309 152 AF-HLAQGCEGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRF 229 (347)
T ss_pred HH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCCC
Confidence 86 667889999999998 699999999999999997 6777665554 7789999999988765431 12222 238
Q ss_pred c-EEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----
Q 017901 239 D-AVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA---- 313 (364)
Q Consensus 239 D-~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 313 (364)
| ++|||+|+...+..++++++++|+++.+|.... ..... . ..+..+..+++++.+++...
T Consensus 230 d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~----------~~~~~---~--~~~~~~~~~~~~i~g~~~~~~~~~ 294 (347)
T PRK10309 230 DQLILETAGVPQTVELAIEIAGPRAQLALVGTLHH----------DLHLT---S--ATFGKILRKELTVIGSWMNYSSPW 294 (347)
T ss_pred CeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC----------CcccC---h--hhhhHHhhcCcEEEEEeccccCCc
Confidence 8 999999987788999999999999999986511 00010 0 01113566788888876532
Q ss_pred CHHHHHHHHHHHHcCCce--eccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901 314 DAEGLEEIRRLSETGKLK--IPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD 364 (364)
Q Consensus 314 ~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~ 364 (364)
..++++++++++++|.++ +.++++|+|+|+++||+.+.+++..||+|+++.
T Consensus 295 ~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 347 (347)
T PRK10309 295 PGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQIP 347 (347)
T ss_pred chhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence 246789999999999985 568999999999999999999988899999863
No 26
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=1.1e-41 Score=319.67 Aligned_cols=320 Identities=18% Similarity=0.190 Sum_probs=238.6
Q ss_pred ceeeEEecccCCCceEEEcccccCCCCC-------CCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEE
Q 017901 28 SCRAVVLPRFGGPEVLEVRPNVEVPDLK-------PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEV 100 (364)
Q Consensus 28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~-------~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V 100 (364)
.|||+++..++ .++++ ++|.|+|+ +|||||||.++|||++|++.+.|..+ ..+|+++|||++|+|
T Consensus 2 ~mka~v~~~~~---~~~~~-e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~----~~~p~i~GhE~~G~V 73 (393)
T TIGR02819 2 GNRGVVYLGPG---KVEVQ-DIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT----APTGLVLGHEITGEV 73 (393)
T ss_pred CceEEEEecCC---ceeEE-eccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC----CCCCccccceeEEEE
Confidence 58999998544 48888 99999874 68999999999999999999988532 256899999999999
Q ss_pred EeecCCCCCCCCCCEEEEecCC----------------------------C-----CCCCcceeEEeecCC--ccccCCC
Q 017901 101 AAVGASVRSLTVGQEVFGALHP----------------------------T-----AVRGTYADYAVLSED--ELTPKPV 145 (364)
Q Consensus 101 ~~vG~~~~~~~~Gd~V~~~~~~----------------------------~-----~~~g~~~~~~~~~~~--~~~~ip~ 145 (364)
+++|+++++|++||||+..... + ..+|+|+||++++.. +++++|+
T Consensus 74 ~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~ 153 (393)
T TIGR02819 74 IEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPD 153 (393)
T ss_pred EEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCC
Confidence 9999999999999999764210 0 136999999999964 6999999
Q ss_pred CCCh----hhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEe-eCCc-cHHHHHHcCC
Q 017901 146 SVTH----ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSK-SIDRVLAAGA 219 (364)
Q Consensus 146 ~~~~----~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~-~~~~-~~~~~~~~g~ 219 (364)
+++. .+++.+.+++.++|+++ ....+++|++|+|.| +|++|++++|+|+.+|++++.+ .+++ ++++++++|+
T Consensus 154 ~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga 231 (393)
T TIGR02819 154 RDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAG-AGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGC 231 (393)
T ss_pred cccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCC
Confidence 8753 34677788889999998 468899999999976 7999999999999999986555 3444 4588999999
Q ss_pred ceeeeCCChhHHHHhc-----CCccEEEECCCCc--------------hhHHHHHhhccCCCEEEEEccCchhhhhcccc
Q 017901 220 EQAVDYSSKDIELAIK-----GKFDAVLDTIGAP--------------ETERLGLNFLKRGGHYMTLHGETAALADHYGL 280 (364)
Q Consensus 220 ~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 280 (364)
+.+.+....++.+.+. ..+|++|||+|.+ ..+..++++++++|+++.+|.......
T Consensus 232 ~~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~----- 306 (393)
T TIGR02819 232 ETVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDP----- 306 (393)
T ss_pred eEEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCccc-----
Confidence 7533333333433332 1399999999986 379999999999999999997511000
Q ss_pred ccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCcee--ccc-eeeccccHHHHHHHHhcCCCCC
Q 017901 281 ALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKI--PVD-KTFHMTQVREAHEAKDKRLIPG 357 (364)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~-~~~~l~~~~eA~~~~~~~~~~g 357 (364)
...........+++.....+.+++++.+.... ..+....+++++.+|++++ +++ +.|+|+|+++||+.+.+++. +
T Consensus 307 ~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~-~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-~ 384 (393)
T TIGR02819 307 GAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTP-VMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-K 384 (393)
T ss_pred ccccccccccccccchHHhhccCceEEeccCC-hhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-e
Confidence 00000000001122223445666777664321 2234467999999999875 355 78999999999999988765 8
Q ss_pred eEEEEcC
Q 017901 358 KVVLEFD 364 (364)
Q Consensus 358 kvvi~~~ 364 (364)
|++++++
T Consensus 385 Kvvi~~~ 391 (393)
T TIGR02819 385 KFVIDPH 391 (393)
T ss_pred EEEEeCC
Confidence 9999863
No 27
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=6.8e-42 Score=316.53 Aligned_cols=301 Identities=19% Similarity=0.209 Sum_probs=231.7
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccc-cCCCCCcccccceeEEEEeecCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI-FEPLLPLILGRDISGEVAAVGASV 107 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~~~~p~~~G~e~~G~V~~vG~~~ 107 (364)
.+++++. ++++++++ +.|.|. +++||+|||.++|||++|++.+.|..... ....+|+++|||++|+|+++|.+
T Consensus 3 ~~~~~~~---~~~~~~~~-~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~- 76 (341)
T cd08237 3 NQVYRLV---RPKFFEVT-YEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG- 76 (341)
T ss_pred ccceEEe---ccceEEEe-ecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC-
Confidence 3677887 56678999 999995 99999999999999999999999864221 12357999999999999998875
Q ss_pred CCCCCCCEEEEecCC--------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHH
Q 017901 108 RSLTVGQEVFGALHP--------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK 167 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~--------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~ 167 (364)
.|++||||+..... ...+|+|+||+++|.++++++|+++++++||.+ .++.++|+++.
T Consensus 77 -~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~-~~~~~a~~a~~ 154 (341)
T cd08237 77 -TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFT-ELVSVGVHAIS 154 (341)
T ss_pred -ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhhhh-chHHHHHHHHH
Confidence 69999999875321 013599999999999999999999999887644 57788999885
Q ss_pred Hh--cccCCCCEEEEEcCCchHHHHHHHHHHH-cC-CeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEE
Q 017901 168 CA--ARMSEGQRLLVLGGGGAVGFAAVQFSVA-SG-CHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVL 242 (364)
Q Consensus 168 ~~--~~~~~g~~vli~g~~g~~G~~~~~~a~~-~g-~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vi 242 (364)
.. +.+++|++|+|.| +|++|++++|+|++ .| ++|+++.+++++ +.+++.+++..++ ++.+.. + +|+||
T Consensus 155 ~~~~~~~~~g~~VlV~G-~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~----~~~~~~-g-~d~vi 227 (341)
T cd08237 155 RFEQIAHKDRNVIGVWG-DGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID----DIPEDL-A-VDHAF 227 (341)
T ss_pred HHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh----hhhhcc-C-CcEEE
Confidence 42 4568899999999 69999999999986 55 578888766554 7777766653332 222222 5 99999
Q ss_pred ECCCC---chhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHH
Q 017901 243 DTIGA---PETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLE 319 (364)
Q Consensus 243 d~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (364)
||+|+ +..+..++++++++|+++.+|.... +. .+....++.+++++.+++.. +.++++
T Consensus 228 D~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------------~~------~~~~~~~~~k~~~i~g~~~~-~~~~~~ 288 (341)
T cd08237 228 ECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY------------PV------PINTRMVLEKGLTLVGSSRS-TREDFE 288 (341)
T ss_pred ECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC------------Cc------ccCHHHHhhCceEEEEeccc-CHHHHH
Confidence 99995 3478999999999999999986410 11 11122456788899887643 467899
Q ss_pred HHHHHHHcC-----Cceeccceeeccc---cHHHHHHHHhcCCCCCeEEEEcC
Q 017901 320 EIRRLSETG-----KLKIPVDKTFHMT---QVREAHEAKDKRLIPGKVVLEFD 364 (364)
Q Consensus 320 ~~~~~~~~g-----~i~~~~~~~~~l~---~~~eA~~~~~~~~~~gkvvi~~~ 364 (364)
++++++.++ .+++.++++|+|+ |+++||+...++ ..||+|++++
T Consensus 289 ~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 289 RAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred HHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 999999998 4667799999985 566666666554 5799999874
No 28
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=2.5e-41 Score=315.82 Aligned_cols=308 Identities=19% Similarity=0.272 Sum_probs=249.8
Q ss_pred ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901 28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107 (364)
Q Consensus 28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 107 (364)
.|||+++...+.+ ++++ +.|.|.+.++||+||+.++++|++|++.+.|..+ ..+|+++|||++|+|+++|+++
T Consensus 2 ~~ka~~~~~~~~~--~~~~-~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v 74 (365)
T cd08277 2 KCKAAVAWEAGKP--LVIE-EIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA----TLFPVILGHEGAGIVESVGEGV 74 (365)
T ss_pred ccEEEEEccCCCC--cEEE-EEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC----CCCCeecccceeEEEEeeCCCC
Confidence 4789989876544 8888 9999999999999999999999999999988643 3578999999999999999999
Q ss_pred CCCCCCCEEEEecCCC-------------------------------------------CCCCcceeEEeecCCccccCC
Q 017901 108 RSLTVGQEVFGALHPT-------------------------------------------AVRGTYADYAVLSEDELTPKP 144 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~~-------------------------------------------~~~g~~~~~~~~~~~~~~~ip 144 (364)
+.+++||+|+...... ...|+|+||+.++.+.++++|
T Consensus 75 ~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP 154 (365)
T cd08277 75 TNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKID 154 (365)
T ss_pred ccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECC
Confidence 9999999998752100 014899999999999999999
Q ss_pred CCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCcee
Q 017901 145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQA 222 (364)
Q Consensus 145 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v 222 (364)
+++++++++.+++++.|||+++.+.+.+++|++|+|+| +|.+|++++|+|+.+|+ +|+++.+++++ +.++++|++++
T Consensus 155 ~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~ 233 (365)
T cd08277 155 PAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDF 233 (365)
T ss_pred CCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcE
Confidence 99999999999999999999887788999999999998 69999999999999999 68888776554 78899999999
Q ss_pred eeCCCh--hHHHHhc----CCccEEEECCCCchhHHHHHhhccCC-CEEEEEccCchhhhhccccccccchhhHHHHHHh
Q 017901 223 VDYSSK--DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRG-GHYMTLHGETAALADHYGLALGLPIATTVLLKKR 295 (364)
Q Consensus 223 ~~~~~~--~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (364)
++.... ++.+.++ +++|++|||+|+...+..++++++++ |+++.+|.... ... ++.
T Consensus 234 i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-----------~~~------~~~ 296 (365)
T cd08277 234 INPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG-----------AEL------SIR 296 (365)
T ss_pred eccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc-----------ccc------ccC
Confidence 887542 2333332 23999999999876889999999885 99999986511 000 001
Q ss_pred hhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCce--eccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 296 MQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLK--IPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
...+.. ++++.+++... ...++.++++++.++.++ +.+++.|+|+|+++||+.+.+++. .|+++.
T Consensus 297 ~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i~ 365 (365)
T cd08277 297 PFQLIL-GRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVIT 365 (365)
T ss_pred HhHHhh-CCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEeeC
Confidence 111222 67777776532 245789999999998765 468999999999999999988874 688863
No 29
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3.1e-41 Score=312.71 Aligned_cols=313 Identities=19% Similarity=0.243 Sum_probs=247.0
Q ss_pred ceeeEEeccc--CC--CceEEEccc---ccCC-CCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCccccc--cee
Q 017901 28 SCRAVVLPRF--GG--PEVLEVRPN---VEVP-DLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGR--DIS 97 (364)
Q Consensus 28 ~~~a~~~~~~--g~--~~~~~~~~~---~~~p-~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~--e~~ 97 (364)
++|.|++.+. |. ++.++++ + .+.| ++++||||||+.|+++|+.|+..+.+.... ...|+++|+ |++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~f~~~-~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~---~~~p~~~G~~~~~~ 83 (348)
T PLN03154 8 ENKQVILKNYIDGIPKETDMEVK-LGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDS---YLPPFVPGQRIEGF 83 (348)
T ss_pred cceEEEEecCCCCCCCcccEEEE-eecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCC---CCCCcCCCCeeEee
Confidence 4577777533 22 3678887 5 3555 458999999999999999998755442211 135889997 889
Q ss_pred EEEEeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCc--c--ccCCCCCChh-hhccccchHHHHHHHHHHhccc
Q 017901 98 GEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDE--L--TPKPVSVTHA-DASAIPFAALTAWRALKCAARM 172 (364)
Q Consensus 98 G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~--~--~~ip~~~~~~-~aa~~~~~~~ta~~~l~~~~~~ 172 (364)
|+|..+|+++++|++||+|+++ |+|++|++++.+. + +++|+++++. ++++++++++|||+++.+.+.+
T Consensus 84 G~v~~vg~~v~~~~~Gd~V~~~-------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~ 156 (348)
T PLN03154 84 GVSKVVDSDDPNFKPGDLISGI-------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSP 156 (348)
T ss_pred EEEEEEecCCCCCCCCCEEEec-------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCC
Confidence 9999999999999999999875 6899999998753 5 4559999986 6888999999999999778899
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH-HcCCceeeeCCCh-hHHHHhc----CCccEEEECC
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL-AAGAEQAVDYSSK-DIELAIK----GKFDAVLDTI 245 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~-~~g~~~v~~~~~~-~~~~~i~----g~~D~vid~~ 245 (364)
++|++|+|+|++|++|++++|+|+.+|++|+++++++++ +.++ ++|+++++++++. ++.+.++ +.+|++|||+
T Consensus 157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~v 236 (348)
T PLN03154 157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNV 236 (348)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECC
Confidence 999999999988999999999999999999998877655 6666 7999999998753 5554443 2399999999
Q ss_pred CCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----CHHHHHHH
Q 017901 246 GAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA----DAEGLEEI 321 (364)
Q Consensus 246 g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 321 (364)
|+. .+..++++++++|+++.+|.... .+.... ........++.+++++.+++... ..+.++++
T Consensus 237 G~~-~~~~~~~~l~~~G~iv~~G~~~~-----------~~~~~~-~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~ 303 (348)
T PLN03154 237 GGD-MLDAALLNMKIHGRIAVCGMVSL-----------NSLSAS-QGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENV 303 (348)
T ss_pred CHH-HHHHHHHHhccCCEEEEECcccc-----------CCCCCC-CCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHH
Confidence 986 89999999999999999986511 000000 00001123566788888876531 13567889
Q ss_pred HHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901 322 RRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD 364 (364)
Q Consensus 322 ~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~ 364 (364)
++++++|++++.+.+.|+|+++++||+.+.+++..||+|+++.
T Consensus 304 ~~l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~ 346 (348)
T PLN03154 304 SRYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVA 346 (348)
T ss_pred HHHHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEec
Confidence 9999999999888889999999999999999999999999863
No 30
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=3e-41 Score=313.53 Aligned_cols=304 Identities=21% Similarity=0.287 Sum_probs=246.0
Q ss_pred EEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCC
Q 017901 32 VVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLT 111 (364)
Q Consensus 32 ~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 111 (364)
+++.+++.+ ++++ +.|.|.|+++||+||+.++|+|++|++.+.+... ....+|.++|||++|+|+++|++++.+
T Consensus 2 ~~~~~~g~~--~~~~-~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~--~~~~~p~i~GhE~~G~V~~vG~~v~~~- 75 (349)
T TIGR03201 2 WMMTEPGKP--MVKT-RVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVR--TNHALPLALGHEISGRVIQAGAGAASW- 75 (349)
T ss_pred ceEecCCCC--ceEE-eccCCCCCCCeEEEEEEEEeecccchHHHcCCCC--ccCCCCeeccccceEEEEEeCCCcCCC-
Confidence 456656654 7888 9999999999999999999999999998744221 122568999999999999999999887
Q ss_pred CCCEEEEecC-----------------------CCCCCCcceeEEeecCCccccCCC------CCChhhhccccchHHHH
Q 017901 112 VGQEVFGALH-----------------------PTAVRGTYADYAVLSEDELTPKPV------SVTHADASAIPFAALTA 162 (364)
Q Consensus 112 ~Gd~V~~~~~-----------------------~~~~~g~~~~~~~~~~~~~~~ip~------~~~~~~aa~~~~~~~ta 162 (364)
+||+|+.... ....+|+|++|+.++.+.++++|+ ++++++++.+++++.|+
T Consensus 76 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta 155 (349)
T TIGR03201 76 IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTP 155 (349)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHH
Confidence 9999987321 011369999999999999999999 89999999999999999
Q ss_pred HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCCh---hHHHHhc---
Q 017901 163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSK---DIELAIK--- 235 (364)
Q Consensus 163 ~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~---~~~~~i~--- 235 (364)
|+++. ...+++|++|+|+|+ |++|++++|+|+..|++|+++.+++++ +.++++|+++++++.+. ++.+.++
T Consensus 156 ~~a~~-~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t 233 (349)
T TIGR03201 156 YQAAV-QAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFA 233 (349)
T ss_pred HHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhc
Confidence 99984 588999999999996 999999999999999999998766554 88899999999887653 3444433
Q ss_pred ---CCcc----EEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEE
Q 017901 236 ---GKFD----AVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSY 308 (364)
Q Consensus 236 ---g~~D----~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (364)
| +| ++|||+|+...+..++++++++|+++.+|.... +. .++...++.++.++.+
T Consensus 234 ~~~g-~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------------~~------~~~~~~~~~~~~~~~g 294 (349)
T TIGR03201 234 KARG-LRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMA------------KT------EYRLSNLMAFHARALG 294 (349)
T ss_pred ccCC-CCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCC------------Cc------ccCHHHHhhcccEEEE
Confidence 3 65 899999998678889999999999999997511 11 1111234556777887
Q ss_pred EEeccCHHHHHHHHHHHHcCCceec-cceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 309 IYMRADAEGLEEIRRLSETGKLKIP-VDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~g~i~~~-~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
.+.. +.+++..+++++.+|++++. +.+.|+|+|+++||+.+.+++..||+++++
T Consensus 295 ~~~~-~~~~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 295 NWGC-PPDRYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred EecC-CHHHHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHHHcCCccceEEecC
Confidence 7643 46789999999999999752 334799999999999999999889999864
No 31
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=2.1e-41 Score=320.55 Aligned_cols=315 Identities=19% Similarity=0.229 Sum_probs=244.1
Q ss_pred ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhh-ccCCccc---cCCCCCcccccceeEEEEee
Q 017901 28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMR-SGYGRSI---FEPLLPLILGRDISGEVAAV 103 (364)
Q Consensus 28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~-~g~~~~~---~~~~~p~~~G~e~~G~V~~v 103 (364)
.|+++++..+ ..++++ +.|.|.|+++||+||+.++|||++|++.+ .|..... ....+|+++|||++|+|+++
T Consensus 2 ~~~a~~~~~~---~~l~~~-e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~v 77 (410)
T cd08238 2 KTKAWRMYGK---GDLRLE-KFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKV 77 (410)
T ss_pred CcEEEEEEcC---CceEEE-ecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEe
Confidence 5889999854 458999 99999999999999999999999999976 4542111 01246889999999999999
Q ss_pred cCCCC-CCCCCCEEEEecCC------------CCCCCcceeEEeecCC----ccccCCCCCChhhhccc-cch-HHHHHH
Q 017901 104 GASVR-SLTVGQEVFGALHP------------TAVRGTYADYAVLSED----ELTPKPVSVTHADASAI-PFA-ALTAWR 164 (364)
Q Consensus 104 G~~~~-~~~~Gd~V~~~~~~------------~~~~g~~~~~~~~~~~----~~~~ip~~~~~~~aa~~-~~~-~~ta~~ 164 (364)
|++++ .|++||||+..... ...+|+|++|++++.+ .++++|+++++.+++.+ +.+ ..+++.
T Consensus 78 G~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~ 157 (410)
T cd08238 78 GKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYT 157 (410)
T ss_pred CCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhh
Confidence 99998 59999999875320 1136999999999987 68999999999988865 321 122343
Q ss_pred HH--------HHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC---eEEEeeCCccH-HHHHHc--------CCc-eee
Q 017901 165 AL--------KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC---HVSATCGSKSI-DRVLAA--------GAE-QAV 223 (364)
Q Consensus 165 ~l--------~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~---~vi~~~~~~~~-~~~~~~--------g~~-~v~ 223 (364)
++ .+.+++++|++|+|+|++|++|++++|+|+.+|+ +|+++..++++ +.++++ |++ .++
T Consensus 158 a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i 237 (410)
T cd08238 158 ANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYV 237 (410)
T ss_pred hcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEE
Confidence 32 2457889999999999899999999999999864 79888776654 778886 766 467
Q ss_pred eCCC-hhHHHHhc----C-CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhh
Q 017901 224 DYSS-KDIELAIK----G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQ 297 (364)
Q Consensus 224 ~~~~-~~~~~~i~----g-~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (364)
+++. .++.+.++ + .+|++||++|++..+..++++++++|+++.+++... . .. ..+++..
T Consensus 238 ~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~----------~-~~----~~~~~~~ 302 (410)
T cd08238 238 NPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVD----------K-NF----SAPLNFY 302 (410)
T ss_pred CCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCC----------C-Cc----cccccHH
Confidence 7654 34444332 1 399999999987789999999999999887754310 0 00 0112223
Q ss_pred hhhccceeEEEEEeccCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 298 TWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
.+..+++++.+++.. ..++++++++++.+|++++ .++++|+|+|+++||+.+. ++..||+|+.+
T Consensus 303 ~~~~~~~~i~g~~~~-~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~ 368 (410)
T cd08238 303 NVHYNNTHYVGTSGG-NTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYT 368 (410)
T ss_pred HhhhcCcEEEEeCCC-CHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEEC
Confidence 567788999998754 5678999999999999987 5899999999999999998 67779999976
No 32
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=7.1e-41 Score=311.50 Aligned_cols=307 Identities=21% Similarity=0.268 Sum_probs=251.4
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCC---cc-----ccCCCCCcccccceeEEE
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYG---RS-----IFEPLLPLILGRDISGEV 100 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~---~~-----~~~~~~p~~~G~e~~G~V 100 (364)
|||+++.++ +.++++ +.+.|.|+++||+||+.++++|++|++.+.+.. +. .....+|.++|||++|+|
T Consensus 1 mka~~~~~~---~~l~~~-~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V 76 (351)
T cd08233 1 MKAARYHGR---KDIRVE-EVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVV 76 (351)
T ss_pred CceEEEecC---CceEEE-eccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEE
Confidence 789999854 458999 999999999999999999999999998765421 10 001236889999999999
Q ss_pred EeecCCCCCCCCCCEEEEecCC------------------------CCCCCcceeEEeecCCccccCCCCCChhhhcccc
Q 017901 101 AAVGASVRSLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIP 156 (364)
Q Consensus 101 ~~vG~~~~~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~ 156 (364)
+++|+++++|++||+|++.... ...+|+|++|+.++.+.++++|+++++++++.+
T Consensus 77 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~- 155 (351)
T cd08233 77 VEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV- 155 (351)
T ss_pred EEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-
Confidence 9999999999999999974320 012599999999999999999999999988766
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHh
Q 017901 157 FAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAI 234 (364)
Q Consensus 157 ~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i 234 (364)
.++.|||+++ ..+++++|++|+|+| +|.+|++++|+|+.+|+ +|+++.+++++ +.++++|++.++++++.++.+.+
T Consensus 156 ~~~~ta~~~l-~~~~~~~g~~vlI~g-~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l 233 (351)
T cd08233 156 EPLAVAWHAV-RRSGFKPGDTALVLG-AGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEV 233 (351)
T ss_pred cHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHH
Confidence 5778999998 778999999999998 69999999999999999 78888766554 77788999999998877666555
Q ss_pred c----C-CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEE
Q 017901 235 K----G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYI 309 (364)
Q Consensus 235 ~----g-~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (364)
+ + .+|++|||+|+...+..++++++++|+++.+|... .+. .++...+..+++++.++
T Consensus 234 ~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~------------~~~------~~~~~~~~~~~~~i~g~ 295 (351)
T cd08233 234 RKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWE------------KPI------SFNPNDLVLKEKTLTGS 295 (351)
T ss_pred HHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCC------------CCC------ccCHHHHHhhCcEEEEE
Confidence 3 2 39999999997668899999999999999999751 011 11222456778899888
Q ss_pred EeccCHHHHHHHHHHHHcCCcee--ccceeeccccH-HHHHHHHhcCCCC-CeEEE
Q 017901 310 YMRADAEGLEEIRRLSETGKLKI--PVDKTFHMTQV-REAHEAKDKRLIP-GKVVL 361 (364)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~-~eA~~~~~~~~~~-gkvvi 361 (364)
+.. ..+++++++++++++.+++ .++++|+|+|+ ++||+.+.+++.. +|+||
T Consensus 296 ~~~-~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 296 ICY-TREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred ecc-CcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 754 4578999999999999964 57889999996 7999999988874 89987
No 33
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=9.8e-41 Score=307.18 Aligned_cols=308 Identities=28% Similarity=0.356 Sum_probs=258.2
Q ss_pred eeeEEecccCCC-ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901 29 CRAVVLPRFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107 (364)
Q Consensus 29 ~~a~~~~~~g~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 107 (364)
||++++.+++.+ +.+++. ++|.|.+.++||+||+.++++|++|+..+.|..+. ....|.++|||++|+|+++|+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~v 77 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIG-EVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGY--KPELPAIGGSEAVGVVDAVGEGV 77 (324)
T ss_pred CeeEEEccCCChhHeEEEe-ecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCCCCCcceEEEEEEeCCCC
Confidence 689999877765 568899 99999999999999999999999999999886532 12457899999999999999999
Q ss_pred CCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchH
Q 017901 108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV 187 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~ 187 (364)
+++++||+|+++.. .|+|++|+.++...++++|+++++.+++.+++.+++||+++ ..+++++|++|+|+|++|.+
T Consensus 78 ~~~~~Gd~V~~~~~----~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~i 152 (324)
T cd08292 78 KGLQVGQRVAVAPV----HGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAV 152 (324)
T ss_pred CCCCCCCEEEeccC----CCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHH
Confidence 99999999999762 48999999999999999999999999999998899999998 56899999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----C-CccEEEECCCCchhHHHHHhhccCC
Q 017901 188 GFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----G-KFDAVLDTIGAPETERLGLNFLKRG 261 (364)
Q Consensus 188 G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g-~~D~vid~~g~~~~~~~~~~~l~~~ 261 (364)
|++++|+|+.+|+++++++++++. +.++++|+++++++++.++.+.+. + ++|++|||+|+. ....++++++++
T Consensus 153 g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~ 231 (324)
T cd08292 153 GKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGK-LAGELLSLLGEG 231 (324)
T ss_pred HHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHhhcCC
Confidence 999999999999999999776654 677788999898887766655543 1 399999999997 888999999999
Q ss_pred CEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc---------CHHHHHHHHHHHHcCCcee
Q 017901 262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA---------DAEGLEEIRRLSETGKLKI 332 (364)
Q Consensus 262 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~g~i~~ 332 (364)
|+++.+|.... ... .+.......+++++.++.... ..+.+..+++++.++.+++
T Consensus 232 g~~v~~g~~~~-----------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~ 294 (324)
T cd08292 232 GTLVSFGSMSG-----------EPM------QISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLL 294 (324)
T ss_pred cEEEEEecCCC-----------CCC------cCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccC
Confidence 99999986410 010 111112455788888876521 1346888999999999987
Q ss_pred ccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 333 PVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 333 ~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
.+.+.|+++|+++|++.+.++...+|++++
T Consensus 295 ~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 295 PVEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred ccccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 678899999999999999988888899874
No 34
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=2.3e-40 Score=305.34 Aligned_cols=307 Identities=20% Similarity=0.238 Sum_probs=246.1
Q ss_pred ceeeEEeccc--CCC--ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEee
Q 017901 28 SCRAVVLPRF--GGP--EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV 103 (364)
Q Consensus 28 ~~~a~~~~~~--g~~--~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v 103 (364)
.|++|++.++ |++ +.++++ +.+.|+|++|||+|||.++|||+.|.....+ ....|.++|+|++|+|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~evlVkv~a~~in~~~~~~~~~------~~~~p~v~G~e~~G~V~~- 73 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELV-EEELPPLKDGEVLCEALFLSVDPYMRPYSKR------LNEGDTMIGTQVAKVIES- 73 (329)
T ss_pred CceEEEEecCCCCCCCccceEEE-ecCCCCCCCCcEEEEEEEEecCHHHhccccc------CCCCCcEecceEEEEEec-
Confidence 4899999983 454 789999 9999999999999999999999987652111 114588999999999995
Q ss_pred cCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCC---ccccCCCCCC--h---hhhccccchHHHHHHHHHHhcccCCC
Q 017901 104 GASVRSLTVGQEVFGALHPTAVRGTYADYAVLSED---ELTPKPVSVT--H---ADASAIPFAALTAWRALKCAARMSEG 175 (364)
Q Consensus 104 G~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~---~~~~ip~~~~--~---~~aa~~~~~~~ta~~~l~~~~~~~~g 175 (364)
.++.|++||+|+++ ++|++|++++.+ .++++|++++ + ..+++++++++|||+++.+.+++++|
T Consensus 74 --~~~~~~~Gd~V~~~-------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g 144 (329)
T cd08294 74 --KNSKFPVGTIVVAS-------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAG 144 (329)
T ss_pred --CCCCCCCCCEEEee-------CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCC
Confidence 44679999999975 579999999999 9999999988 2 33346788999999999788999999
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchh
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPET 250 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~ 250 (364)
++++|+|++|++|++++|+|+.+|++|+++++++++ +.++++|+++++++++.++.+.++ +.+|++||++|+. .
T Consensus 145 ~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~~-~ 223 (329)
T cd08294 145 ETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAPDGIDCYFDNVGGE-F 223 (329)
T ss_pred CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCCCCcEEEEECCCHH-H
Confidence 999999999999999999999999999999876655 888999999999998777666553 2399999999996 8
Q ss_pred HHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC----HHHHHHHHHHHH
Q 017901 251 ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD----AEGLEEIRRLSE 326 (364)
Q Consensus 251 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 326 (364)
+..++++++++|+++.+|.... +......+. .........+++++.+++.... .+.+++++++++
T Consensus 224 ~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 292 (329)
T cd08294 224 SSTVLSHMNDFGRVAVCGSIST-----YNDKEPKKG------PYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIK 292 (329)
T ss_pred HHHHHHhhccCCEEEEEcchhc-----cCCCCCCcC------cccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHH
Confidence 8999999999999999985311 100000000 0011134556777777654211 345778899999
Q ss_pred cCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 327 TGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 327 ~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
++++++.....|+++++++|++.+.+++..||+|+++
T Consensus 293 ~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 293 EGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred CCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 9999987667799999999999999999999999874
No 35
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=2.8e-40 Score=305.93 Aligned_cols=311 Identities=22% Similarity=0.241 Sum_probs=245.0
Q ss_pred eeeEEecccCCCceEEEcccccC----CCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccce--eEEEEe
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEV----PDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDI--SGEVAA 102 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~----p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~--~G~V~~ 102 (364)
+|+|....+. ++.++++ +.++ |+|++|||||||+|++||+.|++...|..+. ....|+++|+++ .|.+..
T Consensus 8 ~~~~~~~~~~-~~~~~~~-~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~--~~~~p~~~g~~~~g~~~~~~ 83 (338)
T cd08295 8 LKAYVTGFPK-ESDLELR-TTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS--LYLPPFKPGEVITGYGVAKV 83 (338)
T ss_pred EecCCCCCCC-ccceEEE-EecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc--ccCCCcCCCCeEeccEEEEE
Confidence 4566544332 4678998 8877 7899999999999999999999999885321 124578889754 456666
Q ss_pred ecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecC-CccccCC-CCCChh-hhccccchHHHHHHHHHHhcccCCCCEEE
Q 017901 103 VGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSE-DELTPKP-VSVTHA-DASAIPFAALTAWRALKCAARMSEGQRLL 179 (364)
Q Consensus 103 vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~-~~~~~ip-~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vl 179 (364)
+|+++++|++||+|+++ |+|+||++++. +.++++| +++++. ++++++++++|||+++.+.+++++|++|+
T Consensus 84 v~~~v~~~~vGd~V~~~-------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~Vl 156 (338)
T cd08295 84 VDSGNPDFKVGDLVWGF-------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVF 156 (338)
T ss_pred EecCCCCCCCCCEEEec-------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEE
Confidence 78888899999999875 68999999999 7999995 678886 78999999999999997788999999999
Q ss_pred EEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHH-cCCceeeeCCC-hhHHHHhc----CCccEEEECCCCchhHH
Q 017901 180 VLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLA-AGAEQAVDYSS-KDIELAIK----GKFDAVLDTIGAPETER 252 (364)
Q Consensus 180 i~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~-~g~~~v~~~~~-~~~~~~i~----g~~D~vid~~g~~~~~~ 252 (364)
|+|++|++|++++|+|+.+|++|+++++++++ +.+++ +|+++++++++ .++.+.+. +++|++||++|+. .+.
T Consensus 157 I~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~-~~~ 235 (338)
T cd08295 157 VSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGK-MLD 235 (338)
T ss_pred EecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHH-HHH
Confidence 99999999999999999999999998876665 77777 99999998754 35554443 2399999999986 899
Q ss_pred HHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC----HHHHHHHHHHHHcC
Q 017901 253 LGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD----AEGLEEIRRLSETG 328 (364)
Q Consensus 253 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g 328 (364)
.++++++++|+++.+|.... ...... ...........+++++.++..... .+.++++++++.+|
T Consensus 236 ~~~~~l~~~G~iv~~G~~~~-----------~~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g 303 (338)
T cd08295 236 AVLLNMNLHGRIAACGMISQ-----------YNLEWP-EGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEG 303 (338)
T ss_pred HHHHHhccCcEEEEeccccc-----------CCCCCC-CCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCC
Confidence 99999999999999986411 000000 000011134556677777654321 34578889999999
Q ss_pred CceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 329 KLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 329 ~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
++++.+...|+|+++++|++.+.+++..||+|+++
T Consensus 304 ~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 304 KLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred CeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 99987767799999999999999999999999975
No 36
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=5.3e-40 Score=304.99 Aligned_cols=307 Identities=20% Similarity=0.258 Sum_probs=235.0
Q ss_pred CceEEEcccccCCCCC-CCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCEEEE
Q 017901 40 PEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFG 118 (364)
Q Consensus 40 ~~~~~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~ 118 (364)
++.++++ +.+.|+|. +|||+|||.|+|||+.|+..............+|+++|||++|+|+++|+++++|++||+|++
T Consensus 20 ~~~~~~~-~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 98 (345)
T cd08293 20 AENFRVE-ECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTS 98 (345)
T ss_pred ccceEEE-eccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEe
Confidence 4789999 99999874 999999999999999997543221110112356789999999999999999999999999987
Q ss_pred ecCCCCCCCcceeEEeecCCccccCCCCCChhh----hccccchHHHHHHHHHHhcccCCC--CEEEEEcCCchHHHHHH
Q 017901 119 ALHPTAVRGTYADYAVLSEDELTPKPVSVTHAD----ASAIPFAALTAWRALKCAARMSEG--QRLLVLGGGGAVGFAAV 192 (364)
Q Consensus 119 ~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~----aa~~~~~~~ta~~~l~~~~~~~~g--~~vli~g~~g~~G~~~~ 192 (364)
+. +.|++|++++.+.++++|+++++.+ +++++.+++|||+++.+.+++++| ++|+|+|++|++|++++
T Consensus 99 ~~------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~ai 172 (345)
T cd08293 99 FN------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAG 172 (345)
T ss_pred cC------CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHH
Confidence 52 5799999999999999999864432 456677899999999777888877 99999998999999999
Q ss_pred HHHHHcCC-eEEEeeCCccH-HHHHH-cCCceeeeCCChhHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEE
Q 017901 193 QFSVASGC-HVSATCGSKSI-DRVLA-AGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYM 265 (364)
Q Consensus 193 ~~a~~~g~-~vi~~~~~~~~-~~~~~-~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v 265 (364)
|+|+++|+ +|+++++++++ +.+++ +|+++++++++.++.+.++ +++|++|||+|+. .+..++++++++|+++
T Consensus 173 qlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~-~~~~~~~~l~~~G~iv 251 (345)
T cd08293 173 QIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCPEGVDVYFDNVGGE-ISDTVISQMNENSHII 251 (345)
T ss_pred HHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCCCCceEEEECCCcH-HHHHHHHHhccCCEEE
Confidence 99999999 79999877665 66655 9999999988776665553 2399999999997 7899999999999999
Q ss_pred EEccCchhhhhccccccccchhhHHHHHHhh-hhhhccceeEEEEEeccC----HHHHHHHHHHHHcCCceeccceeecc
Q 017901 266 TLHGETAALADHYGLALGLPIATTVLLKKRM-QTWYSYGIDYSYIYMRAD----AEGLEEIRRLSETGKLKIPVDKTFHM 340 (364)
Q Consensus 266 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~i~~~~~~~~~l 340 (364)
.+|.... +. ...+.. ..+.... .....+++.+..+..... .+.++++++++.++++++.....+++
T Consensus 252 ~~G~~~~-----~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l 322 (345)
T cd08293 252 LCGQISQ-----YN--KDVPYP--PPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKETVYEGL 322 (345)
T ss_pred EEeeeec-----cc--CccCcc--ccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccceeEEeecH
Confidence 9985311 00 000000 0000000 011234444444432111 34577888999999998776666799
Q ss_pred ccHHHHHHHHhcCCCCCeEEEEc
Q 017901 341 TQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 341 ~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
+++++||+.+.+++..||+|+++
T Consensus 323 ~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 323 ENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHHHHHHHhcCCCCCeEEEEC
Confidence 99999999999999889999975
No 37
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=3.8e-40 Score=304.41 Aligned_cols=305 Identities=24% Similarity=0.280 Sum_probs=256.6
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||+++..+++ .++++ +.|.|.+.++||+||+.++++|++|+..+.|..+. ...|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~--~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~vG~~v~ 74 (333)
T cd08296 1 YKAVQVTEPGG--PLELV-ERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG---LSYPRVPGHEVVGRIDAVGEGVS 74 (333)
T ss_pred CeEEEEccCCC--CceEE-eccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC---CCCCcccCcceeEEEEEECCCCc
Confidence 78999997644 38888 99999999999999999999999999999886432 24578999999999999999999
Q ss_pred CCCCCCEEEEecCC------------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901 109 SLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 164 (364)
++++||+|+..... ...+|+|++|+.++.+.++++|+++++.+++.+++.+.+||+
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 154 (333)
T cd08296 75 RWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFN 154 (333)
T ss_pred cCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHH
Confidence 99999999863210 012589999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc---CCccE
Q 017901 165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK---GKFDA 240 (364)
Q Consensus 165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~---g~~D~ 240 (364)
++. ...+.++++|+|+| +|.+|++++++|+.+|++|+++++++++ +.++++|+++++++...++.+.+. + +|+
T Consensus 155 ~~~-~~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~-~d~ 231 (333)
T cd08296 155 ALR-NSGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGG-AKL 231 (333)
T ss_pred HHH-hcCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhcCC-CCE
Confidence 985 45899999999999 8999999999999999999999877654 788999999999887766555443 5 999
Q ss_pred EEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHH
Q 017901 241 VLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEE 320 (364)
Q Consensus 241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (364)
++|++|....+..++++++++|+++.+|... . ..+++...++.+++++.++... ...++..
T Consensus 232 vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~--------------~----~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~ 292 (333)
T cd08296 232 ILATAPNAKAISALVGGLAPRGKLLILGAAG--------------E----PVAVSPLQLIMGRKSIHGWPSG-TALDSED 292 (333)
T ss_pred EEECCCchHHHHHHHHHcccCCEEEEEecCC--------------C----CCCcCHHHHhhcccEEEEeCcC-CHHHHHH
Confidence 9999986658999999999999999998751 0 1111222456789999987743 4678889
Q ss_pred HHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 321 IRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 321 ~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
+++++.++++++.+ +.|+++|+++||+.+.+++..||+|++
T Consensus 293 ~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 293 TLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 99999999888765 589999999999999999999999874
No 38
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=7.3e-40 Score=305.85 Aligned_cols=309 Identities=27% Similarity=0.354 Sum_probs=250.9
Q ss_pred eeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCC
Q 017901 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS 109 (364)
Q Consensus 30 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 109 (364)
|++++.+++. .++++ +.+.|.|+++||+||+.++++|++|+....|..+. ..+|.++|||++|+|+++|++++.
T Consensus 2 ka~~~~~~~~--~l~~~-~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~ 75 (361)
T cd08231 2 RAAVLTGPGK--PLEIR-EVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR---VPLPIILGHEGVGRVVALGGGVTT 75 (361)
T ss_pred eEEEEcCCCC--CCEEE-eccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC---CCCCcccccCCceEEEEeCCCccc
Confidence 6888997773 48999 99999999999999999999999999999886431 357889999999999999999986
Q ss_pred ------CCCCCEEEEecCC------------------------------CCCCCcceeEEeecCC-ccccCCCCCChhhh
Q 017901 110 ------LTVGQEVFGALHP------------------------------TAVRGTYADYAVLSED-ELTPKPVSVTHADA 152 (364)
Q Consensus 110 ------~~~Gd~V~~~~~~------------------------------~~~~g~~~~~~~~~~~-~~~~ip~~~~~~~a 152 (364)
|++||+|++.... ....|+|++|+.++.+ .++++|++++..++
T Consensus 76 ~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~a 155 (361)
T cd08231 76 DVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVA 155 (361)
T ss_pred cccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHH
Confidence 9999999987321 0135899999999996 79999999999999
Q ss_pred ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhH
Q 017901 153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDI 230 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~ 230 (364)
+++++++.|||+++.+....++|++|||+| +|.+|++++++|+.+|+ +|+++.+++++ .+++++|++.+++++..++
T Consensus 156 a~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~ 234 (361)
T cd08231 156 APANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPD 234 (361)
T ss_pred HHhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCccccc
Confidence 998899999999997666667999999998 79999999999999999 89988776655 7788999998888765432
Q ss_pred H---HHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhcc
Q 017901 231 E---LAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSY 302 (364)
Q Consensus 231 ~---~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (364)
. ..+. ..+|++|||+|+...+..++++++++|+++.+|.... .. ...+....++.+
T Consensus 235 ~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~----~~~~~~~~~~~~ 298 (361)
T cd08231 235 PQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAP------------AG----TVPLDPERIVRK 298 (361)
T ss_pred HHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCC------------CC----ccccCHHHHhhc
Confidence 2 2222 1399999999986588999999999999999986510 00 011111235777
Q ss_pred ceeEEEEEeccCHHHHHHHHHHHHcC--Cc--eeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 303 GIDYSYIYMRADAEGLEEIRRLSETG--KL--KIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~g--~i--~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
++++.+++.. +.+++.++++++.++ .+ .+.+++.|+++|+++||+.+.++.. +|+||++
T Consensus 299 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 299 NLTIIGVHNY-DPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred ccEEEEcccC-CchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 8888888754 466788889999887 43 3467889999999999999988774 8999864
No 39
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=6.5e-40 Score=302.53 Aligned_cols=309 Identities=24% Similarity=0.294 Sum_probs=237.4
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCc-ccccceeEEEEeecCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPL-ILGRDISGEVAAVGASV 107 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~-~~G~e~~G~V~~vG~~~ 107 (364)
|+++++..++.. .+++ +.+.|.+.|++|+|||.++|||+||++.++|..+.. ..|. ++|||++|+|+++| .+
T Consensus 1 m~a~~~~~~~~~--~~~~-~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~---~~~~~i~GHE~~G~V~evG-~~ 73 (350)
T COG1063 1 MKAAVVYVGGGD--VRLE-EPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFV---PPGDIILGHEFVGEVVEVG-VV 73 (350)
T ss_pred CceeEEEecCCc--cccc-cCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCC---CCCCcccCccceEEEEEec-cc
Confidence 556666644433 3366 776777899999999999999999999999964322 3344 89999999999999 77
Q ss_pred CCCCCCCEEEEecCCC----------------------------CCCCcceeEEeecCCcccc-CCCCCChhhhccccch
Q 017901 108 RSLTVGQEVFGALHPT----------------------------AVRGTYADYAVLSEDELTP-KPVSVTHADASAIPFA 158 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~~----------------------------~~~g~~~~~~~~~~~~~~~-ip~~~~~~~aa~~~~~ 158 (364)
+.+++||||+...... ..+|+|+||+.+|.+++++ +|+++ ..+++++..+
T Consensus 74 ~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~ep 152 (350)
T COG1063 74 RGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEP 152 (350)
T ss_pred cCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcCh
Confidence 8899999998764310 1469999999999765555 58888 6667777778
Q ss_pred HHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCcc-HHHHHH-cCCceeeeCCChhHHHHhc
Q 017901 159 ALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKS-IDRVLA-AGAEQAVDYSSKDIELAIK 235 (364)
Q Consensus 159 ~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~-~~~~~~-~g~~~v~~~~~~~~~~~i~ 235 (364)
+.++|++........++++|+|.| +|++|++++++++.+|+ +|+++..+++ ++++++ .|++.+++...++....+.
T Consensus 153 la~~~~~~a~~~~~~~~~~V~V~G-aGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~ 231 (350)
T COG1063 153 LATAYHGHAERAAVRPGGTVVVVG-AGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEIL 231 (350)
T ss_pred hhhhhhhhhhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHH
Confidence 889987744556666667999999 89999999999999998 5666655554 488888 6666666554433333332
Q ss_pred ----C-CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEE
Q 017901 236 ----G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIY 310 (364)
Q Consensus 236 ----g-~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (364)
| .+|++|||+|....+..++++++++|+++.+|.... .. . .++...+..+++++.|..
T Consensus 232 ~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~------------~~----~-~~~~~~~~~kel~l~gs~ 294 (350)
T COG1063 232 ELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGG------------ED----I-PLPAGLVVSKELTLRGSL 294 (350)
T ss_pred HHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCC------------cc----C-ccCHHHHHhcccEEEecc
Confidence 2 399999999998789999999999999999997611 10 0 122236788999999986
Q ss_pred eccCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCC-CCeEEEEc
Q 017901 311 MRADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLI-PGKVVLEF 363 (364)
Q Consensus 311 ~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~-~gkvvi~~ 363 (364)
......+++.+++++.+|++.+ +++++++++|+++||+.+.+++. ..|+++++
T Consensus 295 ~~~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 295 RPSGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred CCCCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 4335678999999999999986 47899999999999999988655 45988864
No 40
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1.2e-39 Score=300.14 Aligned_cols=296 Identities=19% Similarity=0.251 Sum_probs=236.7
Q ss_pred CCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCEEE
Q 017901 38 GGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVF 117 (364)
Q Consensus 38 g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~ 117 (364)
.+++.+++. +.+.|.|++|||+|||.|+|+|+.|+ .|..+. ...|.++|.|++|+|+++|+ .|++||+|+
T Consensus 14 ~~~~~l~~~-~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~---~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~ 83 (325)
T TIGR02825 14 PTDSDFELK-TVELPPLNNGEVLLEALFLSVDPYMR---VAAKRL---KEGDTMMGQQVARVVESKNV---ALPKGTIVL 83 (325)
T ss_pred CCCCceEEE-eccCCCCCCCcEEEEEEEEecCHHHh---cccCcC---CCCCcEecceEEEEEEeCCC---CCCCCCEEE
Confidence 456789999 99999999999999999999999654 343211 13478999999999999874 599999999
Q ss_pred EecCCCCCCCcceeEEeecCCccccC----CCCCChhhh-ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHH
Q 017901 118 GALHPTAVRGTYADYAVLSEDELTPK----PVSVTHADA-SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAV 192 (364)
Q Consensus 118 ~~~~~~~~~g~~~~~~~~~~~~~~~i----p~~~~~~~a-a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~ 192 (364)
++ ++|++|++++.+.+.++ |++++++++ +++++++.|||+++.+.+++++|++|+|+|++|++|++++
T Consensus 84 ~~-------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~ai 156 (325)
T TIGR02825 84 AS-------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVG 156 (325)
T ss_pred Ee-------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHH
Confidence 85 46999999999887777 999999987 6789999999999888899999999999999999999999
Q ss_pred HHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCCh-hHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEE
Q 017901 193 QFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSK-DIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMT 266 (364)
Q Consensus 193 ~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~-~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~ 266 (364)
|+|+..|++|+++++++++ +.++++|+++++++.+. ++.+.+. +++|++|||+|+. .+..++++++++|+++.
T Consensus 157 qlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~-~~~~~~~~l~~~G~iv~ 235 (325)
T TIGR02825 157 QIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGE-FSNTVIGQMKKFGRIAI 235 (325)
T ss_pred HHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHH-HHHHHHHHhCcCcEEEE
Confidence 9999999999999877655 88899999999998764 4443332 2399999999987 78999999999999999
Q ss_pred EccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-----CHHHHHHHHHHHHcCCceeccceeeccc
Q 017901 267 LHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-----DAEGLEEIRRLSETGKLKIPVDKTFHMT 341 (364)
Q Consensus 267 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~i~~~~~~~~~l~ 341 (364)
+|.... +......+. ......+..+++++.+++... ..+.+.++++++++|++++.+...|+|+
T Consensus 236 ~G~~~~-----~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~ 304 (325)
T TIGR02825 236 CGAIST-----YNRTGPLPP------GPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGFE 304 (325)
T ss_pred ecchhh-----cccCCCCCC------CcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceeccccHH
Confidence 986411 000000000 000113455667777765421 1357889999999999998777789999
Q ss_pred cHHHHHHHHhcCCCCCeEEEE
Q 017901 342 QVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 342 ~~~eA~~~~~~~~~~gkvvi~ 362 (364)
++++|++.+.+++..||+|++
T Consensus 305 ~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 305 NMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHHHHHHhcCCCCCeEEeC
Confidence 999999999999999999974
No 41
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.5e-39 Score=301.02 Aligned_cols=315 Identities=29% Similarity=0.398 Sum_probs=257.4
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCcc-----------------ccCCCCCcc
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRS-----------------IFEPLLPLI 91 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~-----------------~~~~~~p~~ 91 (364)
||++++...+.++.+.+..+.+.|.+.+++|+||+.++++|++|++.+.|.++. .....+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 688888877776677776235777889999999999999999999998875431 012356889
Q ss_pred cccceeEEEEeecCCCCCCCCCCEEEEecCC---------------CCCCCcceeEEeecCCccccCCCCCChhhhcccc
Q 017901 92 LGRDISGEVAAVGASVRSLTVGQEVFGALHP---------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIP 156 (364)
Q Consensus 92 ~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~---------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~ 156 (364)
+|||++|+|+++|+++++|++||+|++.... ...+|+|++|+.++.+.++++|+++++.+++.++
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~ 160 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFP 160 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcc
Confidence 9999999999999999999999999985311 1135899999999999999999999999999999
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH-Hh-
Q 017901 157 FAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL-AI- 234 (364)
Q Consensus 157 ~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~-~i- 234 (364)
+++.|||+++ ....+++|++++|+|++|.+|++++++|+.+|+++++++++++++.++++|++.+++.......+ ..
T Consensus 161 ~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 239 (350)
T cd08274 161 CSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAAKEEAVRALGADTVILRDAPLLADAKAL 239 (350)
T ss_pred cHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCchhhHHHHhcCCeEEEeCCCccHHHHHhh
Confidence 9999999998 77899999999999988999999999999999999999877656778899997666654433322 11
Q ss_pred c-CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc
Q 017901 235 K-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA 313 (364)
Q Consensus 235 ~-g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (364)
. ..+|++|||+|+. .+..++++++++|+++.+|.... . ....+...++.+++++.++...
T Consensus 240 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~------------~-----~~~~~~~~~~~~~~~~~~~~~~- 300 (350)
T cd08274 240 GGEPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGAIAG------------P-----VVELDLRTLYLKDLTLFGSTLG- 300 (350)
T ss_pred CCCCCcEEEecCCHH-HHHHHHHHhccCCEEEEecccCC------------c-----cccCCHHHhhhcceEEEEeecC-
Confidence 1 2399999999987 89999999999999999985410 0 0111122346778888887754
Q ss_pred CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 314 DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 314 ~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
..+.+.++++++.++++++.+++.|+++++++|++.+.++...+|+|+++
T Consensus 301 ~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 301 TREVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred CHHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 56789999999999999888889999999999999999888889999864
No 42
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=2.4e-39 Score=300.04 Aligned_cols=309 Identities=27% Similarity=0.360 Sum_probs=256.3
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
||++++.+++++ +++. +.+.|.+.+++|+|++.++++|++|+....|.++...+..+|.++|+|++|+|+++|+++.
T Consensus 1 ~ka~~~~~~~~~--~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~ 77 (340)
T cd05284 1 MKAARLYEYGKP--LRLE-DVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVD 77 (340)
T ss_pred CeeeEeccCCCC--ceEE-eCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCC
Confidence 689999987654 7888 8888999999999999999999999999988654333446688999999999999999999
Q ss_pred CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901 109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA 165 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~ 165 (364)
.|++||+|+++... ...+|+|++|+.++.++++++|+++++++++.++..+.|||++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~ 157 (340)
T cd05284 78 GLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHA 157 (340)
T ss_pred cCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence 99999999986421 0136899999999999999999999999999999999999999
Q ss_pred HHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CC
Q 017901 166 LKCA-ARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GK 237 (364)
Q Consensus 166 l~~~-~~~~~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~ 237 (364)
+... ..+.++++|+|+| +|.+|++++++|+..| .+|+++.+++++ +.++++|++++++++.. +...+. .+
T Consensus 158 l~~~~~~~~~~~~vlI~g-~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~i~~~~~~~~ 235 (340)
T cd05284 158 VKKALPYLDPGSTVVVIG-VGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDD-VVEEVRELTGGRG 235 (340)
T ss_pred HHHhcccCCCCCEEEEEc-CcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-HHHHHHHHhCCCC
Confidence 8665 4688999999999 6669999999999999 799998776554 77899999999988765 544443 23
Q ss_pred ccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHH
Q 017901 238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEG 317 (364)
Q Consensus 238 ~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (364)
+|+++||+|+......++++++++|+++.+|.... .... . .....+++++.+.... ..+.
T Consensus 236 ~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-----------~~~~---~-----~~~~~~~~~~~~~~~~-~~~~ 295 (340)
T cd05284 236 ADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-----------GRLP---T-----SDLVPTEISVIGSLWG-TRAE 295 (340)
T ss_pred CCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-----------CccC---H-----HHhhhcceEEEEEecc-cHHH
Confidence 99999999985588999999999999999986410 0110 1 1224678888877643 4678
Q ss_pred HHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 318 LEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 318 ~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
+..++++++++.+++ ..+.|+++++++|++.+.+++..||+|+++
T Consensus 296 ~~~~~~~l~~g~l~~-~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 296 LVEVVALAESGKVKV-EITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred HHHHHHHHHhCCCCc-ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 889999999999886 456899999999999999999889999864
No 43
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=7.4e-39 Score=296.23 Aligned_cols=306 Identities=27% Similarity=0.422 Sum_probs=247.9
Q ss_pred eeEEeccc---CCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901 30 RAVVLPRF---GGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS 106 (364)
Q Consensus 30 ~a~~~~~~---g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 106 (364)
||+++.++ ++++.++.. +.|.|.|.++||+||++++++|++|+..+.|..+ ...+|.++|+|++|+|+++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~V~~vG~~ 76 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDI-DLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAP---EAGQPKILGWDAAGVVVAVGDE 76 (336)
T ss_pred CceeeccccCCCCcccceec-ccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCC---CCCCCcccceeeEEEEEEeCCC
Confidence 57888887 788899999 9999999999999999999999999998888532 2246789999999999999999
Q ss_pred CCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCC-----CCEEEEE
Q 017901 107 VRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE-----GQRLLVL 181 (364)
Q Consensus 107 ~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~vli~ 181 (364)
++.|++||+|+++... ...|+|++|+.++.+.++++|+++++++++.++++++|||+++....++++ |++++|+
T Consensus 77 v~~~~~Gd~V~~~~~~-~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ 155 (336)
T TIGR02817 77 VTLFKPGDEVWYAGDI-DRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLII 155 (336)
T ss_pred CCCCCCCCEEEEcCCC-CCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEE
Confidence 9999999999987521 124899999999999999999999999999999999999999877888877 9999999
Q ss_pred cCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchhHHHHH
Q 017901 182 GGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGL 255 (364)
Q Consensus 182 g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~~ 255 (364)
|++|.+|++++|+|+.+ |++|+++++++++ +.++++|+++++++.. ++...+. +++|+++|++++......++
T Consensus 156 ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~ 234 (336)
T TIGR02817 156 GGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIV 234 (336)
T ss_pred cCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHH
Confidence 99999999999999998 9999999876654 7788999999998654 3444332 23999999987655889999
Q ss_pred hhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEec-------cC----HHHHHHHHHH
Q 017901 256 NFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR-------AD----AEGLEEIRRL 324 (364)
Q Consensus 256 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~----~~~~~~~~~~ 324 (364)
++++++|+++.++.. ... .. ..+..+++++.+.... +. ...+++++++
T Consensus 235 ~~l~~~G~~v~~~~~--------------~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 293 (336)
T TIGR02817 235 ELLAPQGRFALIDDP--------------AEL--DI-----SPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARL 293 (336)
T ss_pred HHhccCCEEEEEccc--------------ccc--cc-----hhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHH
Confidence 999999999988532 000 00 0122233443332211 01 1457889999
Q ss_pred HHcCCceeccceeec---cccHHHHHHHHhcCCCCCeEEEE
Q 017901 325 SETGKLKIPVDKTFH---MTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 325 ~~~g~i~~~~~~~~~---l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
+.++.+++.+++.|+ ++++++|++.+.+++..||+++.
T Consensus 294 ~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 294 VDAGKIRTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred HHCCCeeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 999999876665554 78999999999999998999875
No 44
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=9.1e-39 Score=291.05 Aligned_cols=326 Identities=35% Similarity=0.509 Sum_probs=253.1
Q ss_pred ceeeEEeccc-CCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCcccc-CCCCCcccccceeEE---EEe
Q 017901 28 SCRAVVLPRF-GGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF-EPLLPLILGRDISGE---VAA 102 (364)
Q Consensus 28 ~~~a~~~~~~-g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~-~~~~p~~~G~e~~G~---V~~ 102 (364)
.++.+.+..+ ++......+ +.++|.|.++|++|++.++++|+.|+.+.+|...+.. ...+|.+++.++.|. +..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~-~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~ 82 (347)
T KOG1198|consen 4 KIRRVSLVSPPGGGEVLFSE-EVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVES 82 (347)
T ss_pred ccceEEEeccCCCcceEEee-cccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEec
Confidence 3444444444 444556666 9999999999999999999999999999999765432 125675555555444 444
Q ss_pred ec-CCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhc------ccCCC
Q 017901 103 VG-ASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAA------RMSEG 175 (364)
Q Consensus 103 vG-~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~------~~~~g 175 (364)
.| ..+..+..||.+..... .|+|++|+++|...++++|+++++.++|+++.++.|||.++.... ++++|
T Consensus 83 ~g~~~~~~~~~g~~~~~~~~----~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g 158 (347)
T KOG1198|consen 83 VGDDVVGGWVHGDAVVAFLS----SGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKG 158 (347)
T ss_pred cccccccceEeeeEEeeccC----CCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCC
Confidence 55 33455667776666655 699999999999999999999999999999999999999998888 89999
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchh
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPET 250 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~ 250 (364)
++|||+||+|++|++++|+|++.| ++|+++++.+..++++++|+++++||++.++.+.+. +++|+||||+|+. .
T Consensus 159 ~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~~-~ 237 (347)
T KOG1198|consen 159 KSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGGS-T 237 (347)
T ss_pred CeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCCC-c
Confidence 999999999999999999999999 678888888888999999999999999998888776 2499999999998 8
Q ss_pred HHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCc
Q 017901 251 ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKL 330 (364)
Q Consensus 251 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 330 (364)
......++..+|+...++..... ..++.. ...+.....+.......++..+...+...+.+.+..+.++++.+++
T Consensus 238 ~~~~~~~l~~~g~~~~i~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gki 312 (347)
T KOG1198|consen 238 LTKSLSCLLKGGGGAYIGLVGDE-LANYKL----DDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKI 312 (347)
T ss_pred cccchhhhccCCceEEEEecccc-cccccc----ccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcc
Confidence 88888888888854444332100 000000 0000001111122233445556666666678999999999999999
Q ss_pred eeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901 331 KIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD 364 (364)
Q Consensus 331 ~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~ 364 (364)
++.+.+.||++++++||+.+.+++..||+++.++
T Consensus 313 kp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 313 KPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred cCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 9999999999999999999999999999999864
No 45
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=2e-38 Score=291.72 Aligned_cols=313 Identities=30% Similarity=0.398 Sum_probs=258.6
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||+++.+++.+..+.+. +.+.|.+.++||+|++.++++|++|+....|..+.......|.++|||++|+|+++|++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~ 79 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPE-DVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVD 79 (324)
T ss_pred CeEEEEcCCCCccceEEe-ccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCC
Confidence 689999887777788888 8888888999999999999999999999888643222235578899999999999999999
Q ss_pred CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHH
Q 017901 109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG 188 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G 188 (364)
.+++||+|++... ...|+|++|+.++.+.++++|+++++.+++.+++.++|||. +...++++++++++|+|++|.+|
T Consensus 80 ~~~~Gd~V~~~~~--~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~-~~~~~~~~~~~~vlI~g~~~~~g 156 (324)
T cd08244 80 PAWLGRRVVAHTG--RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALG-LLDLATLTPGDVVLVTAAAGGLG 156 (324)
T ss_pred CCCCCCEEEEccC--CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHH-HHHhcCCCCCCEEEEEcCCchHH
Confidence 9999999999861 12489999999999999999999999999999999999964 55778999999999999999999
Q ss_pred HHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCC
Q 017901 189 FAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGG 262 (364)
Q Consensus 189 ~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G 262 (364)
++++++|+.+|++|+++++++++ +.+.++|++.++++.+.++.+.+. .++|+++||+|+. ....++++++++|
T Consensus 157 ~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g 235 (324)
T cd08244 157 SLLVQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPGG 235 (324)
T ss_pred HHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccCc
Confidence 99999999999999999876654 778889998888877665555443 1399999999998 7799999999999
Q ss_pred EEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC-----HHHHHHHHHHHHcCCceecccee
Q 017901 263 HYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD-----AEGLEEIRRLSETGKLKIPVDKT 337 (364)
Q Consensus 263 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~i~~~~~~~ 337 (364)
+++.+|.... ... .......+.+++++.++..... .+.+.++++++.++.+.+.+++.
T Consensus 236 ~~v~~g~~~~-----------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~ 298 (324)
T cd08244 236 RFLTYGWASG-----------EWT------ALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVGQT 298 (324)
T ss_pred EEEEEecCCC-----------CCC------ccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccceE
Confidence 9999986511 000 0111123467777777665321 35678889999999998778889
Q ss_pred eccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 338 FHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 338 ~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
|+++++++|++.+.++...||+++++
T Consensus 299 ~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 299 FPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred EeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 99999999999999999999999874
No 46
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=8.1e-39 Score=297.67 Aligned_cols=312 Identities=22% Similarity=0.238 Sum_probs=248.4
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||+++.+++ .++++ +.+.|.+.++||+||+.++++|++|++.+.+..+. ...|.++|||++|+|+++|++++
T Consensus 1 mka~~~~~~~---~~~l~-~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~---~~~~~~~G~e~~G~V~~vG~~v~ 73 (351)
T cd08285 1 MKAFAMLGIG---KVGWI-EKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG---ERHGMILGHEAVGVVEEVGSEVK 73 (351)
T ss_pred CceEEEccCC---ccEEE-ECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC---CCCCcccCcceEEEEEEecCCcC
Confidence 7899999655 36888 88889999999999999999999999988876432 24588999999999999999999
Q ss_pred CCCCCCEEEEecCC--------------------------CCCCCcceeEEeecCC--ccccCCCCCChhhhccccchHH
Q 017901 109 SLTVGQEVFGALHP--------------------------TAVRGTYADYAVLSED--ELTPKPVSVTHADASAIPFAAL 160 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~--------------------------~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~ 160 (364)
++++||+|++.... ...+|+|++|+.++.+ .++++|+++++++++.++..+.
T Consensus 74 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ 153 (351)
T cd08285 74 DFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMS 153 (351)
T ss_pred ccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchh
Confidence 99999999984310 0136899999999974 8999999999999999988999
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc---
Q 017901 161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK--- 235 (364)
Q Consensus 161 ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~--- 235 (364)
|||+++ ..+.+++|++|+|+| +|.+|++++|+|+.+|++ ++++.+++++ +.++++|+++++++...++.+.+.
T Consensus 154 ta~~~~-~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~ 231 (351)
T cd08285 154 TGFHGA-ELANIKLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLT 231 (351)
T ss_pred hHHHHH-HccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHh
Confidence 999996 678999999999997 799999999999999994 7777666554 778999999999887666555443
Q ss_pred --CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc
Q 017901 236 --GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA 313 (364)
Q Consensus 236 --g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (364)
..+|++|||+|+...+..++++++++|+++.+|.... .... .++...........++.+.+...
T Consensus 232 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----------~~~~----~~~~~~~~~~~~~~~i~~~~~~~ 297 (351)
T cd08285 232 GGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGE----------DDYL----PIPREEWGVGMGHKTINGGLCPG 297 (351)
T ss_pred CCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCC----------Ccee----ecChhhhhhhccccEEEEeecCC
Confidence 1399999999986688999999999999999986511 0000 00000001223344555544332
Q ss_pred CHHHHHHHHHHHHcCCcee---ccceeeccccHHHHHHHHhcCCC-CCeEEEEc
Q 017901 314 DAEGLEEIRRLSETGKLKI---PVDKTFHMTQVREAHEAKDKRLI-PGKVVLEF 363 (364)
Q Consensus 314 ~~~~~~~~~~~~~~g~i~~---~~~~~~~l~~~~eA~~~~~~~~~-~gkvvi~~ 363 (364)
..+.+.++++++.+|++++ .+.+.|+++|+++|++.+.+++. ..|+++++
T Consensus 298 ~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 298 GRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred ccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 4567899999999999987 34556999999999999998874 57999875
No 47
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=1.6e-38 Score=296.84 Aligned_cols=311 Identities=25% Similarity=0.315 Sum_probs=252.3
Q ss_pred cceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901 27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS 106 (364)
Q Consensus 27 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 106 (364)
++|||+++.+++.+ ++++ +.+.|.+.++||+||+.++++|++|++...|.++ ..+|.++|||++|+|+++|++
T Consensus 1 ~~~~a~~~~~~~~~--~~~~-~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~ 73 (365)
T cd08278 1 MKTTAAVVREPGGP--FVLE-DVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP----TPLPAVLGHEGAGVVEAVGSA 73 (365)
T ss_pred CccEEeeeccCCCc--ceEE-EeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC----CCCCcccccceeEEEEEeCCC
Confidence 36899999986654 7888 9999999999999999999999999999988643 246889999999999999999
Q ss_pred CCCCCCCCEEEEecCC---------------------------------------------CCCCCcceeEEeecCCccc
Q 017901 107 VRSLTVGQEVFGALHP---------------------------------------------TAVRGTYADYAVLSEDELT 141 (364)
Q Consensus 107 ~~~~~~Gd~V~~~~~~---------------------------------------------~~~~g~~~~~~~~~~~~~~ 141 (364)
++.|++||+|++.... ....|+|++|+.++.++++
T Consensus 74 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~ 153 (365)
T cd08278 74 VTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVV 153 (365)
T ss_pred cccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEE
Confidence 9999999999963210 0124899999999999999
Q ss_pred cCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCC
Q 017901 142 PKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGA 219 (364)
Q Consensus 142 ~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~ 219 (364)
++|+++++.+++.++++++||++++...+.+++|++|+|+| +|.+|++++|+|+.+|+ +++++.+++++ +.++++|+
T Consensus 154 ~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~ 232 (365)
T cd08278 154 KVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFG-AGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGA 232 (365)
T ss_pred ECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCC
Confidence 99999999999999999999999987888999999999997 69999999999999999 57777666655 77889999
Q ss_pred ceeeeCCChhHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHh
Q 017901 220 EQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR 295 (364)
Q Consensus 220 ~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (364)
+.+++++..++.+.+. +.+|+++||+|+...+..++++++++|+++.+|.... ... ...+
T Consensus 233 ~~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~~-----~~~~ 296 (365)
T cd08278 233 THVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPP-----------GAE-----VTLD 296 (365)
T ss_pred cEEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCC-----------CCc-----cccC
Confidence 9999887665544442 2399999999976688999999999999999986410 000 0111
Q ss_pred hhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCcee-ccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 296 MQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLKI-PVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~~-~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
...+..+++++.++.... ..+.+.+++++++++++.+ .+.+.|+++++++|++.+.+++. -|+|++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~ 365 (365)
T cd08278 297 VNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKV-IKPVLR 365 (365)
T ss_pred HHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCc-eEEEEC
Confidence 223346778887765421 2456788999999999865 35568999999999999988775 488763
No 48
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=9.3e-39 Score=296.18 Aligned_cols=313 Identities=27% Similarity=0.355 Sum_probs=257.7
Q ss_pred eeeEEecccCCC-ceEEEcccccCCCCCC-CeEEEEEeEeecChhhhhhhccCCccccC--CCCCcccccceeEEEEeec
Q 017901 29 CRAVVLPRFGGP-EVLEVRPNVEVPDLKP-NEVLVRTRAVSINPLDTRMRSGYGRSIFE--PLLPLILGRDISGEVAAVG 104 (364)
Q Consensus 29 ~~a~~~~~~g~~-~~~~~~~~~~~p~~~~-~eVlV~v~~~~i~~~D~~~~~g~~~~~~~--~~~p~~~G~e~~G~V~~vG 104 (364)
|||+++..++.+ +.+.++ +.|.|.|.+ ++|+||+.++|+|++|+..+.|..+.... ...|.++|||++|+|+++|
T Consensus 1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG 79 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLE-SYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVG 79 (341)
T ss_pred CceEEEccCCCchhheEEe-ecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeC
Confidence 789999988765 468898 999998887 99999999999999999999886532211 1257799999999999999
Q ss_pred CCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCC
Q 017901 105 ASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGG 184 (364)
Q Consensus 105 ~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~ 184 (364)
+++..|++||+|++... ..|+|++|+.++.+.++++|+++++.+++.+++.++|||+++.....+++|++|+|+|++
T Consensus 80 ~~v~~~~~Gd~V~~~~~---~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~ 156 (341)
T cd08290 80 SGVKSLKPGDWVIPLRP---GLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGAN 156 (341)
T ss_pred CCCCCCCCCCEEEecCC---CCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccch
Confidence 99999999999998753 248999999999999999999999999999999999999999777889999999999989
Q ss_pred chHHHHHHHHHHHcCCeEEEeeCCc-----cHHHHHHcCCceeeeCCCh---hHHHHhc----CCccEEEECCCCchhHH
Q 017901 185 GAVGFAAVQFSVASGCHVSATCGSK-----SIDRVLAAGAEQAVDYSSK---DIELAIK----GKFDAVLDTIGAPETER 252 (364)
Q Consensus 185 g~~G~~~~~~a~~~g~~vi~~~~~~-----~~~~~~~~g~~~v~~~~~~---~~~~~i~----g~~D~vid~~g~~~~~~ 252 (364)
|.+|++++|+|+..|++++++++++ +++.++++|++++++++.. ++...+. +++|++|||+|+. .+.
T Consensus 157 g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~ 235 (341)
T cd08290 157 SAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGK-SAT 235 (341)
T ss_pred hHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcH-hHH
Confidence 9999999999999999999997764 2467788999999887664 4444433 2399999999997 777
Q ss_pred HHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-----C----HHHHHHHHH
Q 017901 253 LGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-----D----AEGLEEIRR 323 (364)
Q Consensus 253 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~ 323 (364)
.++++++++|+++.+|.... .+. .+.....+.+++++.+.+... . ...+..+++
T Consensus 236 ~~~~~l~~~G~~v~~g~~~~-----------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (341)
T cd08290 236 ELARLLSPGGTMVTYGGMSG-----------QPV------TVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAE 298 (341)
T ss_pred HHHHHhCCCCEEEEEeccCC-----------CCc------ccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHH
Confidence 89999999999999986411 011 011113456788888876521 1 125788899
Q ss_pred HHHcCCceeccceee---ccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 324 LSETGKLKIPVDKTF---HMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 324 ~~~~g~i~~~~~~~~---~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
++.++.+.+.....+ +++++++|++.+.+++..||+|+++
T Consensus 299 ~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 299 LIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred HHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 999999987766667 9999999999999999889999874
No 49
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.7e-38 Score=299.73 Aligned_cols=319 Identities=26% Similarity=0.340 Sum_probs=256.1
Q ss_pred ccccceeeEEec--ccCCC-ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCcccc-------CCCCCcccc
Q 017901 24 LVTTSCRAVVLP--RFGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF-------EPLLPLILG 93 (364)
Q Consensus 24 ~~~~~~~a~~~~--~~g~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~-------~~~~p~~~G 93 (364)
.+|.+|+++++. ++|++ ..+++. +.|.|.++++||+|++.+++||++|++...|...+.. ....+.++|
T Consensus 8 ~~~~~~~a~~~~~~~~g~~~~~~~~~-~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G 86 (393)
T cd08246 8 VVPEKMYAFAIRPERYGDPAQAIQLE-DVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGG 86 (393)
T ss_pred cCchhhhheeeecccCCCcccceEEe-ecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccc
Confidence 488999999885 34555 368888 9999999999999999999999999998877411100 011235889
Q ss_pred cceeEEEEeecCCCCCCCCCCEEEEecCCC------------------------CCCCcceeEEeecCCccccCCCCCCh
Q 017901 94 RDISGEVAAVGASVRSLTVGQEVFGALHPT------------------------AVRGTYADYAVLSEDELTPKPVSVTH 149 (364)
Q Consensus 94 ~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~ 149 (364)
||++|+|+++|++++.+++||+|++..... ..+|+|++|+.++.+.++++|+++++
T Consensus 87 ~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~ 166 (393)
T cd08246 87 SDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSW 166 (393)
T ss_pred cceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCH
Confidence 999999999999999999999999875210 12599999999999999999999999
Q ss_pred hhhccccchHHHHHHHHHHh--cccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCC
Q 017901 150 ADASAIPFAALTAWRALKCA--ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYS 226 (364)
Q Consensus 150 ~~aa~~~~~~~ta~~~l~~~--~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~ 226 (364)
.+++.+++.+.|||+++... +++++|++|+|+|+.|.+|++++++|+.+|++++++++++++ +.++++|++++++++
T Consensus 167 ~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i~~~ 246 (393)
T cd08246 167 EEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRR 246 (393)
T ss_pred HHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEccc
Confidence 99999999999999998544 678999999999988999999999999999998888776554 788899999888864
Q ss_pred Ch----------------------hHHHHhc----C--CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhcc
Q 017901 227 SK----------------------DIELAIK----G--KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHY 278 (364)
Q Consensus 227 ~~----------------------~~~~~i~----g--~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 278 (364)
.. .+.+.+. + .+|++|||+|+. .+..++++++++|+++.+|....
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~------ 319 (393)
T cd08246 247 DFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA-TFPTSVFVCDRGGMVVICAGTTG------ 319 (393)
T ss_pred ccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH-hHHHHHHHhccCCEEEEEcccCC------
Confidence 32 1223332 2 399999999986 88999999999999999986411
Q ss_pred ccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcC-CCCC
Q 017901 279 GLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKR-LIPG 357 (364)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~-~~~g 357 (364)
... ......+..++.++.+.+.. ..+.+..++++++++.+.+.+++.|+++|+++|++.+.++ +..|
T Consensus 320 -----~~~------~~~~~~l~~~~~~i~g~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~g 387 (393)
T cd08246 320 -----YNH------TYDNRYLWMRQKRIQGSHFA-NDREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVG 387 (393)
T ss_pred -----CCC------CCcHHHHhhheeEEEecccC-cHHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccc
Confidence 000 01111345667777776654 4567889999999999988788999999999999999998 7889
Q ss_pred eEEEE
Q 017901 358 KVVLE 362 (364)
Q Consensus 358 kvvi~ 362 (364)
|+++-
T Consensus 388 kvvv~ 392 (393)
T cd08246 388 NMAVL 392 (393)
T ss_pred eEEEe
Confidence 98863
No 50
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=4.3e-38 Score=292.75 Aligned_cols=312 Identities=25% Similarity=0.327 Sum_probs=254.9
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCcc---------ccCCCCCcccccceeEE
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRS---------IFEPLLPLILGRDISGE 99 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~---------~~~~~~p~~~G~e~~G~ 99 (364)
|||+++..++.+ ++++ +.|.|++.++||+||+.++++|++|++.+.|.++. .....+|.++|+|++|+
T Consensus 1 ~~a~~~~~~~~~--~~~~-~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~ 77 (350)
T cd08240 1 MKAAAVVEPGKP--LEEV-EIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGE 77 (350)
T ss_pred CeeEEeccCCCC--ceEE-ecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEE
Confidence 789999877765 7888 99999999999999999999999999999885421 00124567899999999
Q ss_pred EEeecCCCCCCCCCCEEEEecCCC-----------------------CCCCcceeEEeecCCccccCCCCCChhhhcccc
Q 017901 100 VAAVGASVRSLTVGQEVFGALHPT-----------------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIP 156 (364)
Q Consensus 100 V~~vG~~~~~~~~Gd~V~~~~~~~-----------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~ 156 (364)
|+++|++++.+++||+|+++.... ...|+|++|+.++.+.++++|+++++.+++.+.
T Consensus 78 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~ 157 (350)
T cd08240 78 VVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLA 157 (350)
T ss_pred EEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhh
Confidence 999999999999999999863210 135899999999999999999999999999999
Q ss_pred chHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHh
Q 017901 157 FAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAI 234 (364)
Q Consensus 157 ~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i 234 (364)
+.++|||+++.....+.++++|+|+| +|.+|++++|+|+..|+ +|+++.+++++ +.+.++|++.+++++..++.+.+
T Consensus 158 ~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 236 (350)
T cd08240 158 CSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRI 236 (350)
T ss_pred chhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHHHH
Confidence 99999999997766677899999997 79999999999999999 68888666554 77889999888887665544433
Q ss_pred c----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEE
Q 017901 235 K----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIY 310 (364)
Q Consensus 235 ~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (364)
. +++|++||++|+...+..++++|+++|+++.+|.... .... .+ .....+++++.+.+
T Consensus 237 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-----------~~~~---~~----~~~~~~~~~i~~~~ 298 (350)
T cd08240 237 IKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGG-----------EATL---PL----PLLPLRALTIQGSY 298 (350)
T ss_pred HHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCC-----------CCcc---cH----HHHhhcCcEEEEcc
Confidence 3 2499999999976689999999999999999986511 0000 11 12334777887776
Q ss_pred eccCHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 311 MRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 311 ~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
.. ..+++..++++++++.+++...+.|+++++++|++.+.+++..||+++++
T Consensus 299 ~~-~~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 299 VG-SLEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred cC-CHHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence 54 45788999999999999877778999999999999999999889999864
No 51
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=3.5e-38 Score=297.89 Aligned_cols=320 Identities=25% Similarity=0.337 Sum_probs=255.8
Q ss_pred ccccceeeEEecc--cCCC-ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccc-------cCCCCC-ccc
Q 017901 24 LVTTSCRAVVLPR--FGGP-EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSI-------FEPLLP-LIL 92 (364)
Q Consensus 24 ~~~~~~~a~~~~~--~g~~-~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-------~~~~~p-~~~ 92 (364)
.+|++|||+++.. ++++ +.+++. +.|.|.|.++||+|+++++++|++|++...+....+ .+...| .++
T Consensus 3 ~~~~~~~a~~~~~~~~~~~~~~~~~~-~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 81 (398)
T TIGR01751 3 VVPETMYAFAIREERDGDPRQAIQLE-VVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHII 81 (398)
T ss_pred ccchhhhheEEecccCCCcccceEEe-ecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceec
Confidence 4678999999965 6766 679999 999999999999999999999999988776532110 001223 379
Q ss_pred ccceeEEEEeecCCCCCCCCCCEEEEecCCC------------------------CCCCcceeEEeecCCccccCCCCCC
Q 017901 93 GRDISGEVAAVGASVRSLTVGQEVFGALHPT------------------------AVRGTYADYAVLSEDELTPKPVSVT 148 (364)
Q Consensus 93 G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~------------------------~~~g~~~~~~~~~~~~~~~ip~~~~ 148 (364)
|||++|+|+++|++++.+++||+|++..... ...|+|++|+.++.+.++++|++++
T Consensus 82 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~ 161 (398)
T TIGR01751 82 GSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLT 161 (398)
T ss_pred ccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCC
Confidence 9999999999999999999999999864210 1258999999999999999999999
Q ss_pred hhhhccccchHHHHHHHHHH--hcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeC
Q 017901 149 HADASAIPFAALTAWRALKC--AARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDY 225 (364)
Q Consensus 149 ~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~ 225 (364)
+++++.+...+.+||+++.. ...+.+|++++|+|++|.+|++++++|+.+|++++++++++++ +.++++|++.++|+
T Consensus 162 ~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~v~~ 241 (398)
T TIGR01751 162 WEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAVIDR 241 (398)
T ss_pred HHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEEecC
Confidence 99999999999999999854 4678999999999988999999999999999998888665554 77888999999986
Q ss_pred CChh----------------------HHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhcc
Q 017901 226 SSKD----------------------IELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHY 278 (364)
Q Consensus 226 ~~~~----------------------~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~ 278 (364)
+..+ +.+.+. +.+|++|||+|+. .+..++++++++|+++.+|....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~------ 314 (398)
T TIGR01751 242 NDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRA-TFPTSVFVCRRGGMVVICGGTTG------ 314 (398)
T ss_pred CCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHhhccCCEEEEEccccC------
Confidence 5421 222222 2399999999986 88999999999999999987511
Q ss_pred ccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCe
Q 017901 279 GLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGK 358 (364)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gk 358 (364)
... ..+...+..++..+.+.... ..+++++++++++++.+.+.+++.|+++++++||+.+.+++..||
T Consensus 315 -----~~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gk 382 (398)
T TIGR01751 315 -----YNH------DYDNRYLWMRQKRIQGSHFA-NLREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGN 382 (398)
T ss_pred -----CCC------CcCHHHHhhcccEEEccccC-cHHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCce
Confidence 000 00111234556666665543 345678899999999999888899999999999999999999999
Q ss_pred EEEEc
Q 017901 359 VVLEF 363 (364)
Q Consensus 359 vvi~~ 363 (364)
+|+++
T Consensus 383 vvv~~ 387 (398)
T TIGR01751 383 VAVLV 387 (398)
T ss_pred EEEEe
Confidence 99976
No 52
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=6.8e-38 Score=290.15 Aligned_cols=306 Identities=18% Similarity=0.244 Sum_probs=244.6
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||+++.+ ++.++++ +.+.|.|.++||+||+.++++|++|++.+.|..+. .++|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~---~~~~~~~-~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~ 73 (339)
T PRK10083 1 MKSIVIEK---PNSLAIE-ERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF---AKYPRVIGHEFFGVIDAVGEGVD 73 (339)
T ss_pred CeEEEEec---CCeeEEE-eccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc---CCCCcccccceEEEEEEECCCCc
Confidence 68899985 4468999 99999999999999999999999999999886432 24688999999999999999999
Q ss_pred CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901 109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA 165 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~ 165 (364)
.+++||+|+..... ...+|+|++|+.++.+.++++|+++++.+++ +...+.++|++
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~ 152 (339)
T PRK10083 74 AARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANV 152 (339)
T ss_pred cCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHH
Confidence 99999999853110 0125899999999999999999999998876 55667788865
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHH-cCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc--C-Ccc
Q 017901 166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVA-SGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK--G-KFD 239 (364)
Q Consensus 166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~-~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~--g-~~D 239 (364)
. ...++++|++|+|+| +|.+|++++|+|+. +|++ ++++.+++++ +.++++|+++++++...++.+.+. + .+|
T Consensus 153 ~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d 230 (339)
T PRK10083 153 T-GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGIKPT 230 (339)
T ss_pred H-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCCCCC
Confidence 4 678999999999999 79999999999996 6996 5555555544 778999999999887666666654 2 157
Q ss_pred EEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHH
Q 017901 240 AVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLE 319 (364)
Q Consensus 240 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (364)
++|||+|++..+..++++++++|+++.+|.... +.. . .......+++++.+... ..+.+.
T Consensus 231 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~~---~---~~~~~~~~~~~~~~~~~--~~~~~~ 290 (339)
T PRK10083 231 LIIDAACHPSILEEAVTLASPAARIVLMGFSSE------------PSE---I---VQQGITGKELSIFSSRL--NANKFP 290 (339)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------------Cce---e---cHHHHhhcceEEEEEec--ChhhHH
Confidence 999999976689999999999999999986510 110 0 00112246666666553 356789
Q ss_pred HHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCC-CCCeEEEEcC
Q 017901 320 EIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRL-IPGKVVLEFD 364 (364)
Q Consensus 320 ~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~-~~gkvvi~~~ 364 (364)
+++++++++.+.+ .+++.|+++++++|++.+.++. ..+|+++++.
T Consensus 291 ~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~ 338 (339)
T PRK10083 291 VVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFA 338 (339)
T ss_pred HHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecC
Confidence 9999999999987 4789999999999999998654 5589999864
No 53
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=6.7e-38 Score=290.46 Aligned_cols=311 Identities=29% Similarity=0.403 Sum_probs=257.9
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||+++..++ +..++++ +.+.|.|.++|++|++.++++|++|+..+.|..+.. ...|.++|+|++|+|+++|++++
T Consensus 1 m~a~~~~~~~-~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~V~~vG~~~~ 76 (341)
T cd08297 1 MKAAVVEEFG-EKPYEVK-DVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVK--PKLPLIGGHEGAGVVVAVGPGVS 76 (341)
T ss_pred CceEEeeccC-CCCceEE-EeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcC--CCCCccCCcccceEEEEeCCCCC
Confidence 7899998776 5578999 999999999999999999999999999988865321 24567899999999999999999
Q ss_pred CCCCCCEEEEecC------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901 109 SLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164 (364)
Q Consensus 109 ~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 164 (364)
.+++||+|+.... .....|+|++|+.++.+.++++|+++++.+++.++..+.|||+
T Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~ 156 (341)
T cd08297 77 GLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYK 156 (341)
T ss_pred CCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHH
Confidence 9999999997521 0012589999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCc
Q 017901 165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKF 238 (364)
Q Consensus 165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~ 238 (364)
++.. .+++++++++|+|+++.+|++++++|+.+|++|+++.+++++ +.+.++|+++++++...++.+.+. +.+
T Consensus 157 ~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~v 235 (341)
T cd08297 157 ALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGA 235 (341)
T ss_pred HHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCC
Confidence 9854 689999999999988889999999999999999999877655 777889999999887665554443 239
Q ss_pred cEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHH
Q 017901 239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGL 318 (364)
Q Consensus 239 D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (364)
|++|||.++...+..++++++++|+++.+|.... .. .+.....+..+++++.+.... ..+.+
T Consensus 236 d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~------------~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~ 297 (341)
T cd08297 236 HAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPG------------GF-----IPLDPFDLVLRGITIVGSLVG-TRQDL 297 (341)
T ss_pred CEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCC------------CC-----CCCCHHHHHhcccEEEEeccC-CHHHH
Confidence 9999988876688999999999999999986511 00 011112345678888776543 46889
Q ss_pred HHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 319 EEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 319 ~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
++++++++++.+.+.+ +.|+++++++|++.+.++...||+++++
T Consensus 298 ~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 298 QEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred HHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 9999999999987644 6799999999999999999899999975
No 54
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=6.7e-38 Score=293.19 Aligned_cols=310 Identities=30% Similarity=0.439 Sum_probs=254.4
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||+++.+++.+ ++++ +.|.|.+.++||+|++.++++|++|+....|..+. .+|.++|||++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~~--~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~----~~p~~~g~e~~G~v~~vG~~~~ 73 (367)
T cd08263 1 MKAAVLKGPNPP--LTIE-EIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF----PPPFVLGHEISGEVVEVGPNVE 73 (367)
T ss_pred CeeEEEecCCCC--cEEE-EeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC----CCCcccccccceEEEEeCCCCC
Confidence 789999987654 7888 89999999999999999999999999998886432 5678999999999999999998
Q ss_pred C---CCCCCEEEEecCC---------------------------------------------CCCCCcceeEEeecCCcc
Q 017901 109 S---LTVGQEVFGALHP---------------------------------------------TAVRGTYADYAVLSEDEL 140 (364)
Q Consensus 109 ~---~~~Gd~V~~~~~~---------------------------------------------~~~~g~~~~~~~~~~~~~ 140 (364)
+ |++||+|++.... ....|+|++|+.++.+.+
T Consensus 74 ~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 153 (367)
T cd08263 74 NPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATAL 153 (367)
T ss_pred CCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhE
Confidence 8 9999999983210 013589999999999999
Q ss_pred ccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcC
Q 017901 141 TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAG 218 (364)
Q Consensus 141 ~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g 218 (364)
+++|+++++.+++.++.+++|||+++...+.+.++++++|+| +|.+|++++++|+.+|++ ++++.+++++ +.++++|
T Consensus 154 ~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g 232 (367)
T cd08263 154 APLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELG 232 (367)
T ss_pred EECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhC
Confidence 999999999999999999999999997778889999999996 799999999999999998 8877665554 7778899
Q ss_pred CceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHH
Q 017901 219 AEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLK 293 (364)
Q Consensus 219 ~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (364)
++.+++++..++.+.+. ..+|++|||+|+......++++++++|+++.+|.... ... ..
T Consensus 233 ~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~~-----~~ 296 (367)
T cd08263 233 ATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPG-----------GAT-----AE 296 (367)
T ss_pred CceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCC-----------CCc-----cc
Confidence 99999887766554443 2399999999986578899999999999999986411 000 00
Q ss_pred HhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCceec--cceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 294 KRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIP--VDKTFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
.....+..+++++.+++.....+.++.+++++.++.+++. +++.|+++++++|++.+.+++..||+|++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 297 IPITRLVRRGIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred cCHHHHhhCCeEEEecCCCCcHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 1111233567777775433235788999999999998863 67899999999999999999988999874
No 55
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=9.6e-38 Score=287.72 Aligned_cols=317 Identities=26% Similarity=0.385 Sum_probs=253.5
Q ss_pred ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901 28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107 (364)
Q Consensus 28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 107 (364)
+|+++.+.++|++..+.++ +.+.|.|.++||+||+.++|+|++|++...|.++. ..+|.++|||++|+|+.+|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~vG~~v 76 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAV-EFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP---PSLPSGLGTEAAGVVSKVGSGV 76 (327)
T ss_pred CceEEEEeccCChhHeEEe-eccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC---CCCCCccCcceEEEEEEeCCCC
Confidence 5899999999999999999 99999999999999999999999999998886432 2357789999999999999999
Q ss_pred CCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchH
Q 017901 108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV 187 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~ 187 (364)
+.+++||+|++... ..|+|++|+.++.+.++++|+++++.+++.++..+.+||+++...+.+++|++++|+|++|.+
T Consensus 77 ~~~~~Gd~V~~~~~---~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~i 153 (327)
T PRK10754 77 KHIKVGDRVVYAQS---ALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGV 153 (327)
T ss_pred CCCCCCCEEEECCC---CCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHH
Confidence 99999999987543 248999999999999999999999999999988999999998777889999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCC
Q 017901 188 GFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRG 261 (364)
Q Consensus 188 G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~ 261 (364)
|++++++|+.+|++|+++.+++.+ +.++++|++++++....++.+.+. +.+|++|||+|+. ....++++++++
T Consensus 154 g~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~ 232 (327)
T PRK10754 154 GLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKD-TWEASLDCLQRR 232 (327)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHH-HHHHHHHHhccC
Confidence 999999999999999999876655 778899998888877666555443 1399999999986 888999999999
Q ss_pred CEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCceec--ccee
Q 017901 262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLKIP--VDKT 337 (364)
Q Consensus 262 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~~~--~~~~ 337 (364)
|+++.+|.... .........+. ...........+.+...+. ..+.+..+++++.+|.+++. ..+.
T Consensus 233 g~~v~~g~~~~----------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~ 301 (327)
T PRK10754 233 GLMVSFGNASG----------PVTGVNLGILN-QKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQK 301 (327)
T ss_pred CEEEEEccCCC----------CCCCcCHHHHh-ccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcE
Confidence 99999986511 00000000100 0000111111222222111 12345678999999999853 5789
Q ss_pred eccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 338 FHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 338 ~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
|+++++++|++.+.+++..+|+|+..
T Consensus 302 ~~~~~~~~a~~~~~~~~~~~~~~~~~ 327 (327)
T PRK10754 302 FPLKDAQRAHEILESRATQGSSLLIP 327 (327)
T ss_pred EcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 99999999999999999999999863
No 56
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=1.1e-37 Score=288.41 Aligned_cols=305 Identities=24% Similarity=0.279 Sum_probs=252.3
Q ss_pred eeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCC
Q 017901 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS 109 (364)
Q Consensus 30 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 109 (364)
|+++.+..+ .++++. +.+.|+|.++||+||+.++++|++|++.+.|... ...+|.++|||++|+|+++|+++++
T Consensus 1 ~~~~~~~~~--~~~~~~-~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~V~~vG~~v~~ 74 (337)
T cd05283 1 KGYAARDAS--GKLEPF-TFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG---PTKYPLVPGHEIVGIVVAVGSKVTK 74 (337)
T ss_pred CceEEecCC--CCceEE-eccCCCCCCCeEEEEEEEecccchHHHHhcCCcC---CCCCCcccCcceeeEEEEECCCCcc
Confidence 456666555 468999 9999999999999999999999999999988642 2356889999999999999999999
Q ss_pred CCCCCEEEEec-C------------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccch
Q 017901 110 LTVGQEVFGAL-H------------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFA 158 (364)
Q Consensus 110 ~~~Gd~V~~~~-~------------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 158 (364)
|++||+|+... . .....|+|++|+.++.+.++++|+++++.+++.+.+.
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~ 154 (337)
T cd05283 75 FKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA 154 (337)
T ss_pred cCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhH
Confidence 99999997321 0 0023589999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCC
Q 017901 159 ALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGK 237 (364)
Q Consensus 159 ~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~ 237 (364)
+.+||+++. ...+++|++++|.| .|.+|++++++|+.+|++++++.+++++ +.++++|++.+++....++.....+.
T Consensus 155 ~~ta~~~~~-~~~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~ 232 (337)
T cd05283 155 GITVYSPLK-RNGVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGS 232 (337)
T ss_pred HHHHHHHHH-hcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhhccCC
Confidence 999999984 45689999999977 7999999999999999999999776554 77889999988887665544433333
Q ss_pred ccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHH
Q 017901 238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEG 317 (364)
Q Consensus 238 ~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (364)
+|++|||+|+...+..++++++++|+++.+|.... .. .++...++.+++++.+.+.. ..++
T Consensus 233 ~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~------~~~~~~~~~~~~~i~~~~~~-~~~~ 293 (337)
T cd05283 233 LDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEE------------PL------PVPPFPLIFGRKSVAGSLIG-GRKE 293 (337)
T ss_pred ceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCC------------CC------ccCHHHHhcCceEEEEeccc-CHHH
Confidence 99999999987458999999999999999986511 10 11112345688889888765 5778
Q ss_pred HHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 318 LEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 318 ~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
++.+++++.++++++.+ +.|+++++++||+.+.+++..||+|++
T Consensus 294 ~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 294 TQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 99999999999988754 689999999999999999999999875
No 57
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.9e-37 Score=286.39 Aligned_cols=312 Identities=29% Similarity=0.390 Sum_probs=254.8
Q ss_pred ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901 28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107 (364)
Q Consensus 28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 107 (364)
||||+++.+++....+.+. +.+.|.+.++||+||+.++++|+.|+....|..+. ....|.++|+|++|+|+++|+++
T Consensus 1 ~m~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vG~~v 77 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIG-ESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPP--PPGSSEILGLEVAGYVEDVGSDV 77 (334)
T ss_pred CcEEEEEEecCCCcceEEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccceeeEEEEEEeCCCC
Confidence 6999999988887778888 88888899999999999999999999998885432 22456789999999999999999
Q ss_pred CCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchH
Q 017901 108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV 187 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~ 187 (364)
+.+++||+|+++.. +|+|++|+.++.++++++|++++..+++.+++++.+||+++.+.+.+++|++++|+|++|.+
T Consensus 78 ~~~~~Gd~V~~~~~----~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~ 153 (334)
T PTZ00354 78 KRFKEGDRVMALLP----GGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGV 153 (334)
T ss_pred CCCCCCCEEEEecC----CCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Confidence 99999999998743 48999999999999999999999999999999999999998777899999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChh-HHHHhc-----CCccEEEECCCCchhHHHHHhhccC
Q 017901 188 GFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKD-IELAIK-----GKFDAVLDTIGAPETERLGLNFLKR 260 (364)
Q Consensus 188 G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~-~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~ 260 (364)
|++++++|+.+|++++.+.+++++ +.+.++|++.++++...+ +...+. ..+|++|||+|+. .+..+++++++
T Consensus 154 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~ 232 (334)
T PTZ00354 154 GTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGS-YLSETAEVLAV 232 (334)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchH-HHHHHHHHhcc
Confidence 999999999999998877666554 777889998888876544 444433 1399999999986 88999999999
Q ss_pred CCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC---------HHHHHHHHHHHHcCCce
Q 017901 261 GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD---------AEGLEEIRRLSETGKLK 331 (364)
Q Consensus 261 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~i~ 331 (364)
+|+++.+|.... .... . ++...+..++.++.+...... ...++.++++++++.+.
T Consensus 233 ~g~~i~~~~~~~-----------~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 296 (334)
T PTZ00354 233 DGKWIVYGFMGG-----------AKVE---K--FNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIK 296 (334)
T ss_pred CCeEEEEecCCC-----------Cccc---c--cCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCcc
Confidence 999999985411 0100 0 111123344555555443210 13457788999999998
Q ss_pred eccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 332 IPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 332 ~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
+.+.+.|++++++++++.+.+++..+|+|+++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~ 328 (334)
T PTZ00354 297 PIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTV 328 (334)
T ss_pred CccccEEcHHHHHHHHHHHHhCCCCceEEEec
Confidence 87888999999999999999888889999876
No 58
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=2.2e-37 Score=286.66 Aligned_cols=306 Identities=22% Similarity=0.280 Sum_probs=247.6
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
||++++++++... .++ +.|.|.+.++||+||+.++++|++|+..+.|..+. ..|.++|||++|+|+++|++++
T Consensus 1 mka~~~~~~~~~~--~~~-~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~----~~~~~~g~e~~G~V~~~G~~v~ 73 (338)
T PRK09422 1 MKAAVVNKDHTGD--VVV-EKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD----KTGRILGHEGIGIVKEVGPGVT 73 (338)
T ss_pred CeEEEecCCCCCc--eEE-EecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC----CCCccCCcccceEEEEECCCCc
Confidence 7899999877652 277 88999999999999999999999999998886432 3467899999999999999999
Q ss_pred CCCCCCEEEEecC------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901 109 SLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164 (364)
Q Consensus 109 ~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 164 (364)
.|++||+|++... ....+|+|++|+.++.+.++++|+++++.+++.++..+.|||+
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~ 153 (338)
T PRK09422 74 SLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYK 153 (338)
T ss_pred cCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHH
Confidence 9999999986211 0012689999999999999999999999999999999999999
Q ss_pred HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHH-cCCeEEEeeCCccH-HHHHHcCCceeeeCCC-hhHHHHhc---CCc
Q 017901 165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVA-SGCHVSATCGSKSI-DRVLAAGAEQAVDYSS-KDIELAIK---GKF 238 (364)
Q Consensus 165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~-~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~-~~~~~~i~---g~~ 238 (364)
++ ..+.+++|++|+|+| +|.+|++++++|+. .|++|+++.+++++ +.++++|++.+++++. .++.+.+. +.+
T Consensus 154 ~~-~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~~~ 231 (338)
T PRK09422 154 AI-KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGA 231 (338)
T ss_pred HH-HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcCCC
Confidence 98 778999999999999 79999999999998 49999999776655 7889999998888754 34444443 338
Q ss_pred cEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHH
Q 017901 239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGL 318 (364)
Q Consensus 239 D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (364)
|.++++.++...+..++++++++|+++.+|.... .. .+.......++..+.++... ..+.+
T Consensus 232 d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~------~~~~~~~~~~~~~~~~~~~~-~~~~~ 292 (338)
T PRK09422 232 HAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE------------SM------DLSIPRLVLDGIEVVGSLVG-TRQDL 292 (338)
T ss_pred cEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC------------Cc------eecHHHHhhcCcEEEEecCC-CHHHH
Confidence 8555555555589999999999999999986410 00 01111344456667665533 46788
Q ss_pred HHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 319 EEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 319 ~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
+.++++++++.+.+.+. .++++++++||+.+.++...||+++++
T Consensus 293 ~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~ 336 (338)
T PRK09422 293 EEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDF 336 (338)
T ss_pred HHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEec
Confidence 99999999999876554 689999999999999999999999875
No 59
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=3e-37 Score=263.63 Aligned_cols=298 Identities=21% Similarity=0.276 Sum_probs=244.1
Q ss_pred ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEee--cCCCCCCCCCCEEEE
Q 017901 41 EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAV--GASVRSLTVGQEVFG 118 (364)
Q Consensus 41 ~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v--G~~~~~~~~Gd~V~~ 118 (364)
+.++++ +.++|+|+++|||||++|.+++|..+..++.. ..--.|+-+|-..+|.++.. -|+.++|++||.|.+
T Consensus 25 d~F~le-e~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~----~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~ 99 (340)
T COG2130 25 DDFRLE-EVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDA----PSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVG 99 (340)
T ss_pred CCceeE-eccCCCCCcCceEEEEEEeccCHHHeecccCC----cccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEe
Confidence 679999 99999999999999999999999544333332 22245777787776644432 266788999999999
Q ss_pred ecCCCCCCCcceeEEeecCCccccCCCCCCh--hhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHH
Q 017901 119 ALHPTAVRGTYADYAVLSEDELTPKPVSVTH--ADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSV 196 (364)
Q Consensus 119 ~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~--~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~ 196 (364)
. .+|++|..++.+.+.|+++..-+ .....+..++.|||.+|.+.+..++|++|+|.+|+|.+|..+.|+||
T Consensus 100 ~-------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAK 172 (340)
T COG2130 100 V-------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAK 172 (340)
T ss_pred c-------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHH
Confidence 7 57999999999999999864221 22345567889999999999999999999999999999999999999
Q ss_pred HcCCeEEEeeCCccH-HHHHH-cCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEcc
Q 017901 197 ASGCHVSATCGSKSI-DRVLA-AGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 197 ~~g~~vi~~~~~~~~-~~~~~-~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 269 (364)
..|++|++++.++++ +++.+ +|+|.++||+++++.+.++ | +|++||++|++ .++..+..|+..+|++.||.
T Consensus 173 lkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~G-IDvyfeNVGg~-v~DAv~~~ln~~aRi~~CG~ 250 (340)
T COG2130 173 LKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKG-IDVYFENVGGE-VLDAVLPLLNLFARIPVCGA 250 (340)
T ss_pred hhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCC-eEEEEEcCCch-HHHHHHHhhccccceeeeee
Confidence 999999999998887 77766 9999999999999988887 6 99999999999 99999999999999999997
Q ss_pred CchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC-----HHHHHHHHHHHHcCCceeccceeeccccHH
Q 017901 270 ETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD-----AEGLEEIRRLSETGKLKIPVDKTFHMTQVR 344 (364)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~ 344 (364)
.. .|+-....+. +..+..++.+.+++.|+....+ .+..+++..++++|+|+...+-.-.||.++
T Consensus 251 IS-----~YN~~~~~~g------p~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP 319 (340)
T COG2130 251 IS-----QYNAPELPPG------PRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDGLENAP 319 (340)
T ss_pred hh-----hcCCCCCCCC------cchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehhhhhccH
Confidence 62 2433222111 1222246667888888876221 367889999999999999888778899999
Q ss_pred HHHHHHhcCCCCCeEEEEc
Q 017901 345 EAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 345 eA~~~~~~~~~~gkvvi~~ 363 (364)
+||.-+.+++..||.|+++
T Consensus 320 ~Af~gLl~G~N~GK~vvKv 338 (340)
T COG2130 320 EAFIGLLSGKNFGKLVVKV 338 (340)
T ss_pred HHHHHHhcCCccceEEEEe
Confidence 9999999999999999986
No 60
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=7.6e-37 Score=284.38 Aligned_cols=330 Identities=39% Similarity=0.699 Sum_probs=252.7
Q ss_pred eeeEEecccCCCc-eEEEcccccCCCC-CCCeEEEEEeEeecChhhhhhhccCCcc------------ccCCCCCccccc
Q 017901 29 CRAVVLPRFGGPE-VLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRS------------IFEPLLPLILGR 94 (364)
Q Consensus 29 ~~a~~~~~~g~~~-~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~------------~~~~~~p~~~G~ 94 (364)
|||+++.++++++ .+.++ +.+.|.| .++||+|+++++++|++|+....|.... +.....|.++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~-~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~ 79 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLE-NARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGR 79 (350)
T ss_pred CceEEecccCCCcceeeec-ccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecc
Confidence 7899998887753 47888 9999999 4999999999999999999998874210 002356889999
Q ss_pred ceeEEEEeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCC
Q 017901 95 DISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE 174 (364)
Q Consensus 95 e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~ 174 (364)
|++|+|+++|+++++|++||+|+++.... ..|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++.+.+.+.+
T Consensus 80 e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~-~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~ 158 (350)
T cd08248 80 DCSGVVVDIGSGVKSFEIGDEVWGAVPPW-SQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNP 158 (350)
T ss_pred eeEEEEEecCCCcccCCCCCEEEEecCCC-CCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999875321 35999999999999999999999999999999999999999877777754
Q ss_pred ----CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc--CCccEEEECCCCc
Q 017901 175 ----GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK--GKFDAVLDTIGAP 248 (364)
Q Consensus 175 ----g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~--g~~D~vid~~g~~ 248 (364)
|++++|+|++|.+|++++++|+.+|++|+++.++++.+.++++|.+.+++....++...+. +.+|++|||+|+.
T Consensus 159 ~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~vi~~~g~~ 238 (350)
T cd08248 159 KNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVILDTVGGD 238 (350)
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCcchHHHHHHhCCceEEECCChhHHHHHHhcCCCCEEEECCChH
Confidence 9999999999999999999999999999998876555778899998888876655555444 2399999999998
Q ss_pred hhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcC
Q 017901 249 ETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETG 328 (364)
Q Consensus 249 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 328 (364)
....++++++++|+++.+|.........++...................+. +...+.+.......+.+.++++++.++
T Consensus 239 -~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g 316 (350)
T cd08248 239 -TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLL-KGSHYRWGFFSPSGSALDELAKLVEDG 316 (350)
T ss_pred -HHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHh-cCCCeeEEEECCCHHHHHHHHHHHhCC
Confidence 899999999999999999854210000000000000000000000100111 111111222222467899999999999
Q ss_pred CceeccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 329 KLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 329 ~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
.+.+.+++.|+++++++|++.+.+++..+|++++
T Consensus 317 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 317 KIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred CEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 9988888999999999999999988887898864
No 61
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3e-37 Score=281.60 Aligned_cols=299 Identities=28% Similarity=0.373 Sum_probs=246.6
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
||++++...+ +..++++ +.+.|.+.++||+||+.++++|++|++...+. ..|.++|||++|+|+++|+++.
T Consensus 1 ~~~~~~~~~~-~~~~~~~-~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~-------~~~~~~g~e~~G~v~~~G~~v~ 71 (305)
T cd08270 1 MRALVVDPDA-PLRLRLG-EVPDPQPAPHEALVRVAAISLNRGELKFAAER-------PDGAVPGWDAAGVVERAAADGS 71 (305)
T ss_pred CeEEEEccCC-CceeEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHhhccC-------CCCCcccceeEEEEEEeCCCCC
Confidence 6889998765 7788998 99999999999999999999999999876532 2356899999999999999999
Q ss_pred CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHH
Q 017901 109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG 188 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G 188 (364)
.|++||+|+++.. .|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++...... +|++++|+|+.|.+|
T Consensus 72 ~~~~Gd~V~~~~~----~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g 146 (305)
T cd08270 72 GPAVGARVVGLGA----MGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVG 146 (305)
T ss_pred CCCCCCEEEEecC----CcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHH
Confidence 9999999999852 48999999999999999999999999999999999999998665544 599999999889999
Q ss_pred HHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEE
Q 017901 189 FAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267 (364)
Q Consensus 189 ~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~ 267 (364)
++++++|+..|++|+++++++++ +.++++|++.+++... ++.. .+ +|+++||+|+. .+..++++++++|+++.+
T Consensus 147 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~--~~-~d~vl~~~g~~-~~~~~~~~l~~~G~~v~~ 221 (305)
T cd08270 147 RFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGGS-ELSG--AP-VDLVVDSVGGP-QLARALELLAPGGTVVSV 221 (305)
T ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccc-cccC--CC-ceEEEECCCcH-HHHHHHHHhcCCCEEEEE
Confidence 99999999999999999876654 7788899876654322 1111 24 99999999997 889999999999999999
Q ss_pred ccCchhhhhccccccccchhhHHHHHHhhhhhh--ccceeEEEEEecc---CHHHHHHHHHHHHcCCceeccceeecccc
Q 017901 268 HGETAALADHYGLALGLPIATTVLLKKRMQTWY--SYGIDYSYIYMRA---DAEGLEEIRRLSETGKLKIPVDKTFHMTQ 342 (364)
Q Consensus 268 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~i~~~~~~~~~l~~ 342 (364)
|.... ... . .....+. .++.++.+++... ..+.+..++++++++++.+.+.+.+++++
T Consensus 222 g~~~~-----------~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 284 (305)
T cd08270 222 GSSSG-----------EPA----V--FNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPRIGWRGSWTE 284 (305)
T ss_pred eccCC-----------Ccc----c--ccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccceeccEEcHHH
Confidence 86410 000 0 0011122 2577777776531 24678889999999999987888999999
Q ss_pred HHHHHHHHhcCCCCCeEEEEc
Q 017901 343 VREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 343 ~~eA~~~~~~~~~~gkvvi~~ 363 (364)
+++|++.+.++...||+|+++
T Consensus 285 ~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 285 IDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred HHHHHHHHHcCCCCceEEEeC
Confidence 999999999999989999875
No 62
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=4.9e-37 Score=287.40 Aligned_cols=310 Identities=21% Similarity=0.266 Sum_probs=245.6
Q ss_pred ceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901 28 SCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107 (364)
Q Consensus 28 ~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 107 (364)
+||++++...++. ++++ +.|.|.+.++||+||++++|+|++|++.+.|..+ ..+|+++|||++|+|+++|+++
T Consensus 7 ~~~a~~~~~~~~~--~~l~-~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~v 79 (373)
T cd08299 7 KCKAAVLWEPKKP--FSIE-EIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV----TPFPVILGHEAAGIVESVGEGV 79 (373)
T ss_pred eeEEEEEecCCCC--cEEE-EeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC----CCCCccccccceEEEEEeCCCC
Confidence 4888888876554 7888 9999999999999999999999999999988642 2568899999999999999999
Q ss_pred CCCCCCCEEEEecCC--------------------------------------------CCCCCcceeEEeecCCccccC
Q 017901 108 RSLTVGQEVFGALHP--------------------------------------------TAVRGTYADYAVLSEDELTPK 143 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~--------------------------------------------~~~~g~~~~~~~~~~~~~~~i 143 (364)
+.+++||+|+.+... ....|+|++|++++.+.++++
T Consensus 80 ~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~l 159 (373)
T cd08299 80 TTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKI 159 (373)
T ss_pred ccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeC
Confidence 999999999875210 002589999999999999999
Q ss_pred CCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCce
Q 017901 144 PVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQ 221 (364)
Q Consensus 144 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~ 221 (364)
|+++++++++.+.+++.+||+++...+++++|++|+|+| +|.+|++++++|+.+|+ +|+++.+++++ +.++++|+++
T Consensus 160 P~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~ 238 (373)
T cd08299 160 DAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATE 238 (373)
T ss_pred CCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCce
Confidence 999999999999999999999987788999999999997 79999999999999999 79998766554 7889999999
Q ss_pred eeeCCChh--HHHHhc----CCccEEEECCCCchhHHHHHhhc-cCCCEEEEEccCchhhhhccccccccchhhHHHHHH
Q 017901 222 AVDYSSKD--IELAIK----GKFDAVLDTIGAPETERLGLNFL-KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKK 294 (364)
Q Consensus 222 v~~~~~~~--~~~~i~----g~~D~vid~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (364)
+++..+.+ +...+. +.+|+++||+|++..+..++..+ +++|+++.+|.... .. .+.+
T Consensus 239 ~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~------------~~----~~~~ 302 (373)
T cd08299 239 CINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPS------------SQ----NLSI 302 (373)
T ss_pred EecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCC------------Cc----eeec
Confidence 98875432 333322 23999999999865777767765 57999999986511 00 0011
Q ss_pred hhhhhhccceeEEEEEecc--CHHHHHHHHHHHHcCCce--eccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 295 RMQTWYSYGIDYSYIYMRA--DAEGLEEIRRLSETGKLK--IPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
.. ..+.++.++.+++... +++++.++++.+.++.++ +.+++.|+++|+++||+.+.+++. .|+++++
T Consensus 303 ~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 303 NP-MLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred CH-HHHhcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 11 1233566777776532 246677777777777554 457899999999999999987765 5888764
No 63
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.6e-37 Score=285.69 Aligned_cols=307 Identities=26% Similarity=0.383 Sum_probs=251.4
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|+|+++.+++.+ +++. +.|.|.+.++|++|++.++++|++|++...|..+ ...+|.++|||++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~--~~~~-~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~v~~~g~~~~ 74 (334)
T PRK13771 1 MKAVILPGFKQG--YRIE-EVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYP---RMKYPVILGHEVVGTVEEVGENVK 74 (334)
T ss_pred CeeEEEcCCCCC--cEEE-eCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCC---CCCCCeeccccceEEEEEeCCCCc
Confidence 789999977764 8888 9999999999999999999999999998888643 224577899999999999999998
Q ss_pred CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901 109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA 165 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~ 165 (364)
.+++||+|++.... ....|+|++|+.++.+.++++|+++++.+++.+++.+.+||++
T Consensus 75 ~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~ 154 (334)
T PRK13771 75 GFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRG 154 (334)
T ss_pred cCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHH
Confidence 89999999987410 0125899999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc--CCccEEE
Q 017901 166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK--GKFDAVL 242 (364)
Q Consensus 166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~--g~~D~vi 242 (364)
+... .++++++++|+|++|.+|++++++|+..|++++++++++++ +.++++ ++++++++ ++.+.+. +++|+++
T Consensus 155 ~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~v~~~~~~d~~l 230 (334)
T PRK13771 155 LRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGS--KFSEEVKKIGGADIVI 230 (334)
T ss_pred HHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCch--hHHHHHHhcCCCcEEE
Confidence 8654 89999999999988999999999999999999998776554 666777 66676654 3333332 2399999
Q ss_pred ECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHH
Q 017901 243 DTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIR 322 (364)
Q Consensus 243 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (364)
||+|+. ....++++++++|+++.+|.... ... ....+.....+++++.+... ..++.++.++
T Consensus 231 d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~-----------~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 292 (334)
T PRK13771 231 ETVGTP-TLEESLRSLNMGGKIIQIGNVDP-----------SPT-----YSLRLGYIILKDIEIIGHIS-ATKRDVEEAL 292 (334)
T ss_pred EcCChH-HHHHHHHHHhcCCEEEEEeccCC-----------CCC-----cccCHHHHHhcccEEEEecC-CCHHHHHHHH
Confidence 999997 78999999999999999986511 000 00011122456777777643 2578899999
Q ss_pred HHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 323 RLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 323 ~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
+++.++.+++.+++.|+++++++|++.+.++...||++++.
T Consensus 293 ~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 293 KLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 99999999877889999999999999999888889999875
No 64
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=6.1e-37 Score=284.49 Aligned_cols=311 Identities=26% Similarity=0.344 Sum_probs=256.6
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||+++.+++.+ +++. +.+.|.+.+++|+|++.++++|++|+....|..+. ..+|.++|+|++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~--~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~~~ 74 (345)
T cd08260 1 MRAAVYEEFGEP--LEIR-EVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD---VTLPHVPGHEFAGVVVEVGEDVS 74 (345)
T ss_pred CeeEEEecCCCC--cEEE-EccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC---CCCCeeeccceeEEEEEECCCCc
Confidence 799999987766 8888 89999999999999999999999999999886432 34578999999999999999999
Q ss_pred CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCC--ccccCCCCCChhhhccccchHHHHH
Q 017901 109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSED--ELTPKPVSVTHADASAIPFAALTAW 163 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~ta~ 163 (364)
.|++||+|++.... ...+|+|++|++++.. .++++|++++..+++.++..++|||
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~ 154 (345)
T cd08260 75 RWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAF 154 (345)
T ss_pred cCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHH
Confidence 99999999872100 0126899999999974 8999999999999999999999999
Q ss_pred HHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCC-hhHHHHhc----CC
Q 017901 164 RALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSS-KDIELAIK----GK 237 (364)
Q Consensus 164 ~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~-~~~~~~i~----g~ 237 (364)
+++.+.+++.++++++|+| +|.+|++++++|+..|++|+++.+++++ +.++++|++++++++. .++...+. +.
T Consensus 155 ~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~ 233 (345)
T cd08260 155 RALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGGG 233 (345)
T ss_pred HHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCCC
Confidence 9987778899999999999 7999999999999999999999776554 7788899999998877 56555443 24
Q ss_pred ccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHH
Q 017901 238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEG 317 (364)
Q Consensus 238 ~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (364)
+|++|||+|+...+..++++++++|+++.+|.... ... .....+..+..+++++.+.... ..+.
T Consensus 234 ~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-----------~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~ 297 (345)
T cd08260 234 AHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLG-----------EEA----GVALPMDRVVARELEIVGSHGM-PAHR 297 (345)
T ss_pred CCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCC-----------CCC----ccccCHHHHhhcccEEEeCCcC-CHHH
Confidence 99999999975588899999999999999986511 000 0111112344667777776543 4678
Q ss_pred HHHHHHHHHcCCceec--cceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 318 LEEIRRLSETGKLKIP--VDKTFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 318 ~~~~~~~~~~g~i~~~--~~~~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
++.++++++++++.+. +++.|+++++++|++.+.++...||+|++
T Consensus 298 ~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 298 YDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred HHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 8999999999998763 67899999999999999999999999874
No 65
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=5e-37 Score=284.58 Aligned_cols=310 Identities=24% Similarity=0.317 Sum_probs=242.4
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
||++++.+++ +.+++. +.|.|.|.++||+||+.++++|++|+.++.+.........+|+++|||++|+|+++|++++
T Consensus 1 ~~~~~~~~~~--~~~~~~-~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~ 77 (341)
T PRK05396 1 MKALVKLKAE--PGLWLT-DVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVT 77 (341)
T ss_pred CceEEEecCC--CceEEE-ECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCC
Confidence 6899998766 458999 9999999999999999999999999998766321111224678999999999999999999
Q ss_pred CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901 109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA 165 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~ 165 (364)
.+++||+|++.... ...+|+|++|++++.+.++++|+++++.+++.+ ..+.+++++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~ 156 (341)
T PRK05396 78 GFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHT 156 (341)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHH
Confidence 99999999986321 013589999999999999999999999888754 455566665
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCc
Q 017901 166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKF 238 (364)
Q Consensus 166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~ 238 (364)
+.. ...+|++++|.| +|.+|++++|+|+.+|+ +++++.+++++ +.++++|++++++++..++.+.+. +.+
T Consensus 157 ~~~--~~~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (341)
T PRK05396 157 ALS--FDLVGEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGF 233 (341)
T ss_pred HHc--CCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCC
Confidence 532 346899999987 79999999999999999 57777555544 778999999999887766655543 239
Q ss_pred cEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHH
Q 017901 239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGL 318 (364)
Q Consensus 239 D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (364)
|++|||.|+...+..++++++++|+++.+|.... .. . +.+..+..+++++.++........+
T Consensus 234 d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~----~--~~~~~~~~~~~~l~~~~~~~~~~~~ 295 (341)
T PRK05396 234 DVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPG------------DM----A--IDWNKVIFKGLTIKGIYGREMFETW 295 (341)
T ss_pred CEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------------CC----c--ccHHHHhhcceEEEEEEccCccchH
Confidence 9999999987688999999999999999986510 00 0 1112455667777776533223456
Q ss_pred HHHHHHHHcC-CceeccceeeccccHHHHHHHHhcCCCCCeEEEEcC
Q 017901 319 EEIRRLSETG-KLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEFD 364 (364)
Q Consensus 319 ~~~~~~~~~g-~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~~ 364 (364)
..+++++.++ ++.+.+.+.|+++++++||+.+.++. .||++++++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 296 YKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred HHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 6788888888 45556788999999999999998887 799999885
No 66
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=3.6e-37 Score=289.75 Aligned_cols=308 Identities=22% Similarity=0.254 Sum_probs=249.1
Q ss_pred eeeEEecccCCCceEEEcccccCCCC-CCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 107 (364)
|+|+++. +++.+++. +.+.|.| .+++|+||+.++++|++|+..+.|.++. .++|.++|||++|+|+++|+++
T Consensus 1 m~a~~~~---~~~~~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v 73 (386)
T cd08283 1 MKALVWH---GKGDVRVE-EVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG---MKKGDILGHEFMGVVEEVGPEV 73 (386)
T ss_pred CeeEEEe---cCCCceEE-eCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC---CCCCccccccceEEEEEeCCCC
Confidence 7899998 44568999 9999988 4999999999999999999999997543 2468899999999999999999
Q ss_pred CCCCCCCEEEEecCCC-------------------------------------------CCCCcceeEEeecCC--cccc
Q 017901 108 RSLTVGQEVFGALHPT-------------------------------------------AVRGTYADYAVLSED--ELTP 142 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~~-------------------------------------------~~~g~~~~~~~~~~~--~~~~ 142 (364)
+++++||+|++..... +.+|+|++|++++.+ .+++
T Consensus 74 ~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~ 153 (386)
T cd08283 74 RNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFK 153 (386)
T ss_pred CCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEE
Confidence 9999999998854100 125899999999988 8999
Q ss_pred CCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCc
Q 017901 143 KPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAE 220 (364)
Q Consensus 143 ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~ 220 (364)
+|+++++.+++.++..++|||+++ ..+++.+|++|+|+| +|.+|++++++|+..|+ +|+++.+++++ +.+++++..
T Consensus 154 lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~ 231 (386)
T cd08283 154 IPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGA 231 (386)
T ss_pred CCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCc
Confidence 999999999999999999999998 788999999999997 79999999999999998 58888776655 778888444
Q ss_pred eeeeCCCh-hHHHHhc----C-CccEEEECCCCc---------------------hhHHHHHhhccCCCEEEEEccCchh
Q 017901 221 QAVDYSSK-DIELAIK----G-KFDAVLDTIGAP---------------------ETERLGLNFLKRGGHYMTLHGETAA 273 (364)
Q Consensus 221 ~v~~~~~~-~~~~~i~----g-~~D~vid~~g~~---------------------~~~~~~~~~l~~~G~~v~~g~~~~~ 273 (364)
.++++... ++.+.+. + .+|++|||+|+. ..+..++++++++|+++.+|....
T Consensus 232 ~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~- 310 (386)
T cd08283 232 ETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGG- 310 (386)
T ss_pred EEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCC-
Confidence 67776655 3555543 1 399999999853 367889999999999999986511
Q ss_pred hhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHh
Q 017901 274 LADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKD 351 (364)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~ 351 (364)
... . ......+.+++++.+.... ..+.+..+++++.++++.+ .+++.|+++++++||+.+.
T Consensus 311 ----------~~~----~--~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~ 373 (386)
T cd08283 311 ----------TVN----K--FPIGAAMNKGLTLRMGQTH-VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFD 373 (386)
T ss_pred ----------CcC----c--cCHHHHHhCCcEEEeccCC-chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHH
Confidence 000 0 0111345677777776533 3567899999999999986 3678999999999999998
Q ss_pred cCC-CCCeEEEEc
Q 017901 352 KRL-IPGKVVLEF 363 (364)
Q Consensus 352 ~~~-~~gkvvi~~ 363 (364)
++. ..+|+||++
T Consensus 374 ~~~~~~~k~~~~~ 386 (386)
T cd08283 374 KKEDGCIKVVLKP 386 (386)
T ss_pred hCCCCeEEEEecC
Confidence 877 457999863
No 67
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=5.1e-37 Score=285.19 Aligned_cols=308 Identities=23% Similarity=0.293 Sum_probs=249.8
Q ss_pred eeeEEecccCCCceEEEcccccCCCC-CCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 107 (364)
||++++.+++ .+++. +.|.|.| .++||+||+.++++|++|++.+.|.++. .++|.++|+|++|+|+++|+++
T Consensus 1 ~ka~~~~~~~---~~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v 73 (347)
T cd05278 1 MKALVYLGPG---KIGLE-EVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG---AKHGMILGHEFVGEVVEVGSDV 73 (347)
T ss_pred CceEEEecCC---ceEEE-EcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC---CCCCceeccceEEEEEEECCCc
Confidence 6889998544 47888 9999999 9999999999999999999999886543 3568899999999999999999
Q ss_pred CCCCCCCEEEEecCCC--------------------------CCCCcceeEEeecCC--ccccCCCCCChhhhccccchH
Q 017901 108 RSLTVGQEVFGALHPT--------------------------AVRGTYADYAVLSED--ELTPKPVSVTHADASAIPFAA 159 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~~--------------------------~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~ 159 (364)
+++++||+|++..... ..+|+|++|+.++.+ .++++|++++..+++.++.++
T Consensus 74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~ 153 (347)
T cd05278 74 KRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDIL 153 (347)
T ss_pred cccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchh
Confidence 9999999999832100 235899999999987 899999999999999999999
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc--
Q 017901 160 LTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-- 235 (364)
Q Consensus 160 ~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-- 235 (364)
+|||+++ ...++++|++|+|.| +|.+|++++|+|+.+|. +++++.+++.+ +.++++|++.+++++..++.+.+.
T Consensus 154 ~ta~~~~-~~~~~~~~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~ 231 (347)
T cd05278 154 PTGFHGA-ELAGIKPGSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILEL 231 (347)
T ss_pred hheeehh-hhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHH
Confidence 9999998 678899999999976 69999999999999996 78888655544 677899999999887766655443
Q ss_pred ---CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEec
Q 017901 236 ---GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR 312 (364)
Q Consensus 236 ---g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (364)
+.+|++|||+|+...+..++++|+++|+++.+|.... .... . .....+.+++++.+....
T Consensus 232 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~~~---~---~~~~~~~~~~~~~~~~~~ 294 (347)
T cd05278 232 TGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGK-----------PDPL---P---LLGEWFGKNLTFKTGLVP 294 (347)
T ss_pred cCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCC-----------Cccc---C---ccchhhhceeEEEeeccC
Confidence 2399999999985488999999999999999985411 0100 0 000123566666665432
Q ss_pred cCHHHHHHHHHHHHcCCceec--cceeeccccHHHHHHHHhcCCC-CCeEEEEc
Q 017901 313 ADAEGLEEIRRLSETGKLKIP--VDKTFHMTQVREAHEAKDKRLI-PGKVVLEF 363 (364)
Q Consensus 313 ~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~eA~~~~~~~~~-~gkvvi~~ 363 (364)
..+.++.+++++.++.+.+. +...|+++++++|++.+.+++. .+|+|+++
T Consensus 295 -~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 295 -VRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred -chhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 36789999999999998863 5788999999999999988776 67998864
No 68
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=3.2e-37 Score=285.51 Aligned_cols=310 Identities=30% Similarity=0.403 Sum_probs=249.4
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|+|+++..++ +..++++ +.+.|.|+++||+|++.++++|++|+....+.. ....|.++|||++|+|+.+|++++
T Consensus 1 m~a~~~~~~~-~~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~ 74 (339)
T cd08249 1 QKAAVLTGPG-GGLLVVV-DVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF----IPSYPAILGCDFAGTVVEVGSGVT 74 (339)
T ss_pred CceEEeccCC-CCccccc-CCCCCCCCCCEEEEEEEEEEcCchheeeeeccc----ccCCCceeeeeeeEEEEEeCCCcC
Confidence 7899999887 6779999 999999999999999999999999998875542 113567899999999999999999
Q ss_pred CCCCCCEEEEecCC----CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhccc----------CC
Q 017901 109 SLTVGQEVFGALHP----TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARM----------SE 174 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~----~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~----------~~ 174 (364)
.+++||+|+++... ...+|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++.+..++ .+
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~ 154 (339)
T cd08249 75 RFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASK 154 (339)
T ss_pred cCCCCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCC
Confidence 99999999997531 11358999999999999999999999999999999999999998666544 78
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchh
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPET 250 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~ 250 (364)
+++++|+|++|.+|++++++|+.+|++|++++++++.+.++++|+++++++...++.+.+. +++|++||++|++..
T Consensus 155 ~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~~~~ 234 (339)
T cd08249 155 GKPVLIWGGSSSVGTLAIQLAKLAGYKVITTASPKNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPES 234 (339)
T ss_pred CCEEEEEcChhHHHHHHHHHHHHcCCeEEEEECcccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeeccchH
Confidence 9999999988999999999999999999998866566888999999999887766655553 339999999998448
Q ss_pred HHHHHhhccC--CCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEE------eccCHHHHHHHH
Q 017901 251 ERLGLNFLKR--GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIY------MRADAEGLEEIR 322 (364)
Q Consensus 251 ~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 322 (364)
+..+++++++ +|+++.+|.... .. .. . .............. .......+..++
T Consensus 235 ~~~~~~~l~~~~~g~~v~~g~~~~------------~~----~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (339)
T cd08249 235 AQLCAEALGRSGGGKLVSLLPVPE------------ET----EP--R-KGVKVKFVLGYTVFGEIPEDREFGEVFWKYLP 295 (339)
T ss_pred HHHHHHHHhccCCCEEEEecCCCc------------cc----cC--C-CCceEEEEEeeeecccccccccchHHHHHHHH
Confidence 9999999999 999999986511 00 00 0 00111111111110 011235677889
Q ss_pred HHHHcCCceeccceeec--cccHHHHHHHHhcCC-CCCeEEEEc
Q 017901 323 RLSETGKLKIPVDKTFH--MTQVREAHEAKDKRL-IPGKVVLEF 363 (364)
Q Consensus 323 ~~~~~g~i~~~~~~~~~--l~~~~eA~~~~~~~~-~~gkvvi~~ 363 (364)
++++++++.+.....++ ++++++||+.+.+++ ..+|+|+++
T Consensus 296 ~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 296 ELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 99999999877666777 999999999999998 889999874
No 69
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.2e-36 Score=280.71 Aligned_cols=316 Identities=26% Similarity=0.347 Sum_probs=254.5
Q ss_pred ceeeEEecccCC--CceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecC
Q 017901 28 SCRAVVLPRFGG--PEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA 105 (364)
Q Consensus 28 ~~~a~~~~~~g~--~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~ 105 (364)
+||++.+.+++. ++.++++ +.+.|.+.++||+||+.++|+|++|+....|..+.. ..+|.++|+|++|+|+.+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~--~~~p~~~g~e~~G~v~~vG~ 77 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIV-DVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG--VKPPFDCGFEGVGEVVAVGE 77 (329)
T ss_pred CceEEEeccCCCCcccCceEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC--CCCCcccCceeEEEEEEECC
Confidence 489999999887 6788999 999999999999999999999999999988864321 35788999999999999999
Q ss_pred CCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCc
Q 017901 106 SVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGG 185 (364)
Q Consensus 106 ~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g 185 (364)
+++.+++||+|+++.. |+|++|+.++.+.++++|++ +.+++.++.++.|||+++.+...+++|++++|+|++|
T Consensus 78 ~v~~~~~Gd~V~~~~~-----g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g 150 (329)
T cd08250 78 GVTDFKVGDAVATMSF-----GAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAG 150 (329)
T ss_pred CCCCCCCCCEEEEecC-----cceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCcc
Confidence 9999999999999865 89999999999999999997 3567788899999999997778899999999999999
Q ss_pred hHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchhHHHHHhhccC
Q 017901 186 AVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKR 260 (364)
Q Consensus 186 ~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~ 260 (364)
.+|++++++|+..|++|+++++++++ +.++++|++.+++....++.+.+. +.+|++|||+|+. .+..+++++++
T Consensus 151 ~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~vd~v~~~~g~~-~~~~~~~~l~~ 229 (329)
T cd08250 151 GTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGE-MFDTCVDNLAL 229 (329)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcCCCCeEEEECCcHH-HHHHHHHHhcc
Confidence 99999999999999999999876654 777889998888776655444332 2399999999986 89999999999
Q ss_pred CCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----CHHHHHHHHHHHHcCCceec--c
Q 017901 261 GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA----DAEGLEEIRRLSETGKLKIP--V 334 (364)
Q Consensus 261 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~i~~~--~ 334 (364)
+|+++.+|....... .++. .+.. ..... ...+.+++++.++.... ..+.+..+++++.++.+++. .
T Consensus 230 ~g~~v~~g~~~~~~~-~~~~---~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 301 (329)
T cd08250 230 KGRLIVIGFISGYQS-GTGP---SPVK---GATLP-PKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDP 301 (329)
T ss_pred CCeEEEEecccCCcc-cCcc---cccc---ccccc-HHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECC
Confidence 999999986511000 0000 0000 00000 12355677888776531 13567888999999998873 4
Q ss_pred ceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 335 DKTFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 335 ~~~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
.+.|+++++++|++.+.++...+|++++
T Consensus 302 ~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 302 TRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred ccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 5679999999999999998888899874
No 70
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=1.1e-36 Score=284.41 Aligned_cols=308 Identities=24% Similarity=0.315 Sum_probs=250.3
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||+++..++++ +++. +++.|.+.++||+|++.++++|++|+..+.|..+ ..+|.++|+|++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~--~~~~-~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~ 73 (363)
T cd08279 1 MRAAVLHEVGKP--LEIE-EVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP----APLPAVLGHEGAGVVEEVGPGVT 73 (363)
T ss_pred CeEEEEecCCCC--ceEE-EeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC----CCCCccccccceEEEEEeCCCcc
Confidence 789999987765 7888 9999999999999999999999999999888643 25678999999999999999999
Q ss_pred CCCCCCEEEEecCC-------------------------------------------CCCCCcceeEEeecCCccccCCC
Q 017901 109 SLTVGQEVFGALHP-------------------------------------------TAVRGTYADYAVLSEDELTPKPV 145 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~-------------------------------------------~~~~g~~~~~~~~~~~~~~~ip~ 145 (364)
.+++||+|++.... ....|+|++|+.++.+.++++|+
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~ 153 (363)
T cd08279 74 GVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDD 153 (363)
T ss_pred ccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCC
Confidence 99999999984210 01358999999999999999999
Q ss_pred CCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceee
Q 017901 146 SVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAV 223 (364)
Q Consensus 146 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~ 223 (364)
++++++++.+++++++||+++.....+.++++++|+| +|.+|++++++|+..|++ |+++.+++.+ +.++++|+++++
T Consensus 154 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv 232 (363)
T cd08279 154 DIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTV 232 (363)
T ss_pred CCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEe
Confidence 9999999999999999999987888999999999996 799999999999999996 8888776655 777889999898
Q ss_pred eCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhh
Q 017901 224 DYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQT 298 (364)
Q Consensus 224 ~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (364)
+++..++...+. +++|+++|++|+...+..++++++++|+++.+|.... .. ...+....
T Consensus 233 ~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~-----~~~~~~~~ 296 (363)
T cd08279 233 NASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPP-----------GE-----TVSLPALE 296 (363)
T ss_pred CCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCC-----------Cc-----ccccCHHH
Confidence 887655554442 2399999999976588999999999999999986410 00 00111112
Q ss_pred hhccceeEEEEEec--cCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEE
Q 017901 299 WYSYGIDYSYIYMR--ADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVV 360 (364)
Q Consensus 299 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvv 360 (364)
+..++..+.+++.. ...+.+++++++++++.+++ .+++.|+++++++|++.+.+++..+.++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 297 LFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 33455666665442 23678999999999999886 3778999999999999999888754444
No 71
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=1.2e-36 Score=280.03 Aligned_cols=311 Identities=21% Similarity=0.235 Sum_probs=245.2
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||++++.+++++.++++ +.|.|.+.++||+|++.++++|++|+..+.|..+.. ..+|.++|||++|+|+++ +++
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~~--~~~ 75 (325)
T cd05280 1 FKALVVEEQDGGVSLFLR-TLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVT--RNYPHTPGIDAAGTVVSS--DDP 75 (325)
T ss_pred CceEEEcccCCCCcceEE-eCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCC--CCCCCccCcccEEEEEEe--CCC
Confidence 789999988876679999 999999999999999999999999999998865321 245778999999999998 456
Q ss_pred CCCCCCEEEEecC--CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhccc--C-CCCEEEEEcC
Q 017901 109 SLTVGQEVFGALH--PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARM--S-EGQRLLVLGG 183 (364)
Q Consensus 109 ~~~~Gd~V~~~~~--~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~--~-~g~~vli~g~ 183 (364)
.+++||+|++... ....+|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++...... . .+++|+|+|+
T Consensus 76 ~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~ 155 (325)
T cd05280 76 RFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGA 155 (325)
T ss_pred CCCCCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECC
Confidence 7999999998641 011358999999999999999999999999999999999999988544333 5 4579999998
Q ss_pred CchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChh--HHHHhc-CCccEEEECCCCchhHHHHHhhcc
Q 017901 184 GGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKD--IELAIK-GKFDAVLDTIGAPETERLGLNFLK 259 (364)
Q Consensus 184 ~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~--~~~~i~-g~~D~vid~~g~~~~~~~~~~~l~ 259 (364)
+|.+|++++++|+.+|++|+++++++++ +.++++|++++++.+... ...... +.+|++|||+|+. .+..++++++
T Consensus 156 ~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~ 234 (325)
T cd05280 156 TGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDLLDESKKPLLKARWAGAIDTVGGD-VLANLLKQTK 234 (325)
T ss_pred ccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhHHHHHHHHhcCCCccEEEECCchH-HHHHHHHhhc
Confidence 8999999999999999999998777654 778899999888765432 122222 2399999999997 8999999999
Q ss_pred CCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC-----HHHHHHHHHHHHcCCceecc
Q 017901 260 RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD-----AEGLEEIRRLSETGKLKIPV 334 (364)
Q Consensus 260 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~i~~~~ 334 (364)
++|+++.+|.... .+. .........+++++.+...... .+.++.+.+++..+ +.+.+
T Consensus 235 ~~g~~v~~g~~~~-----------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 296 (325)
T cd05280 235 YGGVVASCGNAAG-----------PEL------TTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPD-LLEIV 296 (325)
T ss_pred CCCEEEEEecCCC-----------Ccc------ccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcC-Cccce
Confidence 9999999986511 000 0111123367888877654311 13445555555666 33457
Q ss_pred ceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 335 DKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 335 ~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
...|+++++++|++.+.+++..||+|+++
T Consensus 297 ~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 297 VREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred eeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 88999999999999999999999999874
No 72
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=1.4e-36 Score=281.20 Aligned_cols=310 Identities=26% Similarity=0.340 Sum_probs=257.1
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
||++++..++++. +.+. +.+.|.+.+++|+|++.++++|++|+....|.++. ....|.++|+|++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~~~~~g~~~~G~v~~~G~~v~ 76 (338)
T cd08254 1 MKAWRFHKGSKGL-LVLE-EVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPT--LTKLPLTLGHEIAGTVVEVGAGVT 76 (338)
T ss_pred CeeEEEecCCCCc-eEEe-ccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcc--cCCCCEeccccccEEEEEECCCCc
Confidence 7899999887775 7788 88899999999999999999999999999886542 234577899999999999999999
Q ss_pred CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901 109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA 165 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~ 165 (364)
.+++||+|++.... ....|+|++|+.++.+.++++|+++++.+++.++.+++|||++
T Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~ 156 (338)
T cd08254 77 NFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHA 156 (338)
T ss_pred cCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHH
Confidence 99999999872110 0125899999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----CCccE
Q 017901 166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----GKFDA 240 (364)
Q Consensus 166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~ 240 (364)
+.....++++++++|.| +|.+|++++++|+..|++|+++++++++ +.++++|++++++.........+. +.+|+
T Consensus 157 l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D~ 235 (338)
T cd08254 157 VVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDV 235 (338)
T ss_pred HHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCceE
Confidence 87878899999999986 7999999999999999999999776655 778889998888776544433221 23999
Q ss_pred EEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHH
Q 017901 241 VLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEE 320 (364)
Q Consensus 241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (364)
++||+|....+..++++|+++|+++.+|.... .. ......+..++..+.+++.. ..+.+..
T Consensus 236 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 296 (338)
T cd08254 236 IFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRD------------KL------TVDLSDLIARELRIIGSFGG-TPEDLPE 296 (338)
T ss_pred EEECCCCHHHHHHHHHHhhcCCEEEEECCCCC------------CC------ccCHHHHhhCccEEEEeccC-CHHHHHH
Confidence 99999977689999999999999999986410 00 01112355677777776643 5778999
Q ss_pred HHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 321 IRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 321 ~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
++++++++.+.+. .+.|+++++++|++.+.+++..||+|+++
T Consensus 297 ~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 297 VLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred HHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 9999999999876 77999999999999999999999999875
No 73
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1e-36 Score=283.51 Aligned_cols=306 Identities=21% Similarity=0.242 Sum_probs=243.0
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCcccc------CCCCCcccccceeEEEEe
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIF------EPLLPLILGRDISGEVAA 102 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~------~~~~p~~~G~e~~G~V~~ 102 (364)
|||+++.++ ..++++ +.+.|++.+++|+||+.++++|++|+..+.|....+. ...+|.++|||++|+|++
T Consensus 1 mka~~~~~~---~~~~~~-~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~ 76 (350)
T cd08256 1 MRAVVCHGP---QDYRLE-EVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVE 76 (350)
T ss_pred CeeEEEecC---CceEEE-ECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEE
Confidence 689999854 348899 9999999999999999999999999998888531110 014677899999999999
Q ss_pred ecCCCC--CCCCCCEEEEecCC-------------------------CCCCCcceeEEeecCC-ccccCCCCCChhhhcc
Q 017901 103 VGASVR--SLTVGQEVFGALHP-------------------------TAVRGTYADYAVLSED-ELTPKPVSVTHADASA 154 (364)
Q Consensus 103 vG~~~~--~~~~Gd~V~~~~~~-------------------------~~~~g~~~~~~~~~~~-~~~~ip~~~~~~~aa~ 154 (364)
+|++++ .|++||+|++.... ....|+|++|+.++.+ .++++|+++++.+++.
T Consensus 77 vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~ 156 (350)
T cd08256 77 LGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAIL 156 (350)
T ss_pred eCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhh
Confidence 999998 89999999872110 0135899999999988 5789999999999998
Q ss_pred ccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHH
Q 017901 155 IPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIEL 232 (364)
Q Consensus 155 ~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~ 232 (364)
+ .++.|+|+++ +.+++++|++|+|.| +|.+|++++++|+.+|++ ++++.+++++ ..+.++|+++++++...++.+
T Consensus 157 ~-~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 233 (350)
T cd08256 157 I-EPLACALHAV-DRANIKFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVE 233 (350)
T ss_pred h-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHHH
Confidence 8 7889999998 788999999999955 799999999999999986 5555555554 777899999888877655544
Q ss_pred Hhc----C-CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhh-hhccceeE
Q 017901 233 AIK----G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQT-WYSYGIDY 306 (364)
Q Consensus 233 ~i~----g-~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 306 (364)
.+. + .+|++||++|+...+..++++++++|+++.+|.... .. . ..+.. ...+++++
T Consensus 234 ~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~----~--~~~~~~~~~~~~~i 295 (350)
T cd08256 234 KIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGD------------PV----T--VDWSIIGDRKELDV 295 (350)
T ss_pred HHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCC------------CC----c--cChhHhhcccccEE
Confidence 443 1 299999999975578899999999999999985410 00 0 00111 13456677
Q ss_pred EEEEeccCHHHHHHHHHHHHcCCceec--cceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901 307 SYIYMRADAEGLEEIRRLSETGKLKIP--VDKTFHMTQVREAHEAKDKRLIPGKVVL 361 (364)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~eA~~~~~~~~~~gkvvi 361 (364)
.+++.. ...+.+++++++++.+++. +++.|+++++++|++.+.+++..+|+++
T Consensus 296 ~~~~~~--~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 296 LGSHLG--PYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred EEeccC--chhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 776543 3468889999999999873 7889999999999999999988889874
No 74
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1.4e-36 Score=280.46 Aligned_cols=306 Identities=29% Similarity=0.399 Sum_probs=250.5
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|+++++..++ +.+.++ +.|.|.+.+++|+|+++++++|++|++.+.|..+. ...|.++|+|++|+|+++|++++
T Consensus 1 m~a~~~~~~~--~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~G~~v~ 74 (332)
T cd08259 1 MKAAILHKPN--KPLQIE-EVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR---GKYPLILGHEIVGTVEEVGEGVE 74 (332)
T ss_pred CeEEEEecCC--CceEEE-EccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC---CCCCeeccccceEEEEEECCCCc
Confidence 6899998633 458888 99999999999999999999999999999886432 24578999999999999999999
Q ss_pred CCCCCCEEEEecCCC-----------------------CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901 109 SLTVGQEVFGALHPT-----------------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA 165 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~~-----------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~ 165 (364)
.+++||+|+++.... ...|+|++|+.++.+.++++|+++++++++.+++.+.+||++
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~ 154 (332)
T cd08259 75 RFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHA 154 (332)
T ss_pred cCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHH
Confidence 999999999875210 125899999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc--CCccEEE
Q 017901 166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK--GKFDAVL 242 (364)
Q Consensus 166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~--g~~D~vi 242 (364)
+.. +.+.++++++|+|++|.+|++++++++..|++|++++++++. +.+.+++.+.+++... +.+.+. +++|+++
T Consensus 155 l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~v~ 231 (332)
T cd08259 155 LKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSK--FSEDVKKLGGADVVI 231 (332)
T ss_pred HHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHH--HHHHHHhccCCCEEE
Confidence 866 889999999999999999999999999999999998876554 6778888887776543 333333 2399999
Q ss_pred ECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHH
Q 017901 243 DTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIR 322 (364)
Q Consensus 243 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (364)
+|+|.. ....++++++++|+++.+|.... .... ........++..+.+... ....++++++
T Consensus 232 ~~~g~~-~~~~~~~~~~~~g~~v~~g~~~~-----------~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 292 (332)
T cd08259 232 ELVGSP-TIEESLRSLNKGGRLVLIGNVTP-----------DPAP------LRPGLLILKEIRIIGSIS-ATKADVEEAL 292 (332)
T ss_pred ECCChH-HHHHHHHHhhcCCEEEEEcCCCC-----------CCcC------CCHHHHHhCCcEEEEecC-CCHHHHHHHH
Confidence 999987 78899999999999999986511 0000 000012234556655542 2467889999
Q ss_pred HHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 323 RLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 323 ~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
+++.++.+++.+++.|+++++++||+.+.+++..||++++
T Consensus 293 ~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 293 KLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 9999999988888999999999999999999888999874
No 75
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=2.2e-36 Score=280.77 Aligned_cols=307 Identities=20% Similarity=0.291 Sum_probs=248.3
Q ss_pred eeeEEecccCCCceEEEcccccCCCC-CCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 107 (364)
||++++..++ .++++ +.+.|+| .++||+|+++++++|++|+..+.|.++. ..+|.++|||++|+|+++|+++
T Consensus 1 m~a~~~~~~~---~~~~~-~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~v 73 (345)
T cd08286 1 MKALVYHGPG---KISWE-DRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT---VTPGRILGHEGVGVVEEVGSAV 73 (345)
T ss_pred CceEEEecCC---ceeEE-ecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC---CCCCceecccceEEEEEeccCc
Confidence 6889998554 48898 9999986 8999999999999999999999886543 2347899999999999999999
Q ss_pred CCCCCCCEEEEecCC------------------------CCCCCcceeEEeecCC--ccccCCCCCChhhhccccchHHH
Q 017901 108 RSLTVGQEVFGALHP------------------------TAVRGTYADYAVLSED--ELTPKPVSVTHADASAIPFAALT 161 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~~~t 161 (364)
+.+++||+|+..... ...+|+|++|+.++.+ .++++|++++..+++.++..+++
T Consensus 74 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~t 153 (345)
T cd08286 74 TNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPT 153 (345)
T ss_pred cccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHH
Confidence 999999999875311 0124899999999987 89999999999999999999999
Q ss_pred HHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----
Q 017901 162 AWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK---- 235 (364)
Q Consensus 162 a~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~---- 235 (364)
||+++.....+.+|++++|.| +|.+|++++|+|+.+| .+|+++.+++.+ ..++++|++.++++...++...+.
T Consensus 154 a~~~~~~~~~~~~g~~vlI~g-~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~ 232 (345)
T cd08286 154 GYECGVLNGKVKPGDTVAIVG-AGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTD 232 (345)
T ss_pred HHHHHHhhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHhC
Confidence 999876778899999999987 6999999999999999 688887665554 777899999999887655544332
Q ss_pred -CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC
Q 017901 236 -GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD 314 (364)
Q Consensus 236 -g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (364)
+++|++|||+|+...+..++++++++|+++.+|.... .. .+....++.+++++.+....
T Consensus 233 ~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------------~~------~~~~~~~~~~~~~~~~~~~~-- 292 (345)
T cd08286 233 GRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK------------PV------DLHLEKLWIKNITITTGLVD-- 292 (345)
T ss_pred CCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC------------CC------CcCHHHHhhcCcEEEeecCc--
Confidence 2399999999986688899999999999999985410 11 01111335678888765432
Q ss_pred HHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCC--CCeEEEEc
Q 017901 315 AEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLI--PGKVVLEF 363 (364)
Q Consensus 315 ~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~--~gkvvi~~ 363 (364)
.+.+..++++++++.+++ .+++.|+++++++|++.+.+... ..|++|+|
T Consensus 293 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 293 TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 356888899999998875 36789999999999999987643 34999875
No 76
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=2e-36 Score=280.10 Aligned_cols=305 Identities=24% Similarity=0.331 Sum_probs=248.2
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||++++++ +.+++. +.+.|.+.++||+|++.++++|++|+....|..+.. .+|.++|+|++|+|+++|++++
T Consensus 1 ~~a~~~~~~---~~~~~~-~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~---~~~~~~g~e~~G~V~~~G~~v~ 73 (337)
T cd08261 1 MKALVCEKP---GRLEVV-DIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA---SYPRILGHELSGEVVEVGEGVA 73 (337)
T ss_pred CeEEEEeCC---CceEEE-ECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC---CCCcccccccEEEEEEeCCCCC
Confidence 688999864 358898 999999999999999999999999999988864321 3477899999999999999999
Q ss_pred CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901 109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA 165 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~ 165 (364)
.|++||+|++.... ....|+|++|+.++.+ ++++|+++++++++++ ..+++++++
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~ 151 (337)
T cd08261 74 GLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHA 151 (337)
T ss_pred CCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHH
Confidence 99999999973210 0125899999999999 9999999999999877 567788988
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCcc
Q 017901 166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFD 239 (364)
Q Consensus 166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D 239 (364)
+ ...++.+|+++||+| +|.+|++++|+|+.+|++|+++.+++++ +.++++|+++++++...++.+.+. ..+|
T Consensus 152 ~-~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd 229 (337)
T cd08261 152 V-RRAGVTAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGAD 229 (337)
T ss_pred H-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCC
Confidence 7 778999999999997 7999999999999999999999766554 777889999999888766555543 1399
Q ss_pred EEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHH
Q 017901 240 AVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLE 319 (364)
Q Consensus 240 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (364)
++|||+|+...+..++++++++|+++.+|.... +. . .....+..+++++.+... ...+.++
T Consensus 230 ~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~------------~~----~--~~~~~~~~~~~~~~~~~~-~~~~~~~ 290 (337)
T cd08261 230 VVIDATGNPASMEEAVELVAHGGRVVLVGLSKG------------PV----T--FPDPEFHKKELTILGSRN-ATREDFP 290 (337)
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCC------------CC----c--cCHHHHHhCCCEEEEecc-CChhhHH
Confidence 999999886688999999999999999986510 10 0 000123445566666542 2466889
Q ss_pred HHHHHHHcCCcee--ccceeeccccHHHHHHHHhcC-CCCCeEEEEc
Q 017901 320 EIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKR-LIPGKVVLEF 363 (364)
Q Consensus 320 ~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~-~~~gkvvi~~ 363 (364)
.+++++.++.+++ .+...|+++++++|++.+.++ ...+|+|+++
T Consensus 291 ~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 291 DVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred HHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 9999999999987 678899999999999999988 4778999875
No 77
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=1.4e-36 Score=283.82 Aligned_cols=307 Identities=21% Similarity=0.308 Sum_probs=246.7
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
+||+++.+.+.. ++++ +.+.|.+.+++|+|++.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++
T Consensus 1 ~~a~~~~~~~~~--~~~~-~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~----~~~~~i~g~e~~G~V~~vG~~v~ 73 (365)
T cd05279 1 CKAAVLWEKGKP--LSIE-EIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP----TPLPVILGHEGAGIVESIGPGVT 73 (365)
T ss_pred CceeEEecCCCC--cEEE-EeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC----CCCCcccccceeEEEEEeCCCcc
Confidence 468888876655 8888 9999999999999999999999999999988643 24678999999999999999999
Q ss_pred CCCCCCEEEEecCC--------------------------------------------CCCCCcceeEEeecCCccccCC
Q 017901 109 SLTVGQEVFGALHP--------------------------------------------TAVRGTYADYAVLSEDELTPKP 144 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~--------------------------------------------~~~~g~~~~~~~~~~~~~~~ip 144 (364)
.+++||+|++.... ....|+|++|+.++.+.++++|
T Consensus 74 ~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP 153 (365)
T cd05279 74 TLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKID 153 (365)
T ss_pred cCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECC
Confidence 99999999986310 0023789999999999999999
Q ss_pred CCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCcee
Q 017901 145 VSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQA 222 (364)
Q Consensus 145 ~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v 222 (364)
+++++++++.+.+++.+||+++.+.+++++|++++|+| +|.+|++++++|+.+|++ ++++.+++++ +.++++|++++
T Consensus 154 ~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~ 232 (365)
T cd05279 154 PDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATEC 232 (365)
T ss_pred CCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCee
Confidence 99999999999999999999987888999999999997 799999999999999996 6666655544 77899999999
Q ss_pred eeCCCh--hHHHHhc----CCccEEEECCCCchhHHHHHhhcc-CCCEEEEEccCchhhhhccccccccchhhHHHHHHh
Q 017901 223 VDYSSK--DIELAIK----GKFDAVLDTIGAPETERLGLNFLK-RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKR 295 (364)
Q Consensus 223 ~~~~~~--~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (364)
++.++. ++.+.+. +.+|++||++|....+..++++++ ++|+++.+|.... . ... .++
T Consensus 233 v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~----------~-~~~-----~~~ 296 (365)
T cd05279 233 INPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPS----------G-TEA-----TLD 296 (365)
T ss_pred cccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCC----------C-Cce-----eeC
Confidence 887665 4444332 239999999997558899999999 9999999985410 0 000 111
Q ss_pred hhhhhccceeEEEEEec--cCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901 296 MQTWYSYGIDYSYIYMR--ADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVL 361 (364)
Q Consensus 296 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi 361 (364)
...+ .++.++.+.+.. ...+.+..++++++++.+.+ .+++.|+++++++||+.+.+++. .|+++
T Consensus 297 ~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~~~~~ 364 (365)
T cd05279 297 PNDL-LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGES-IRTIL 364 (365)
T ss_pred HHHH-hcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCc-eeeee
Confidence 1122 456667666542 24678899999999999875 48889999999999999987765 46665
No 78
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.2e-36 Score=277.54 Aligned_cols=312 Identities=29% Similarity=0.397 Sum_probs=260.1
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||+++...+..+.+.++ +.+.|.+.++|++|++.++++|++|++...|..+.. ...|.++|||++|+|+++|++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~~G~~~~ 77 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLV-EEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPP--VKDPLIPLSDGAGEVVAVGEGVT 77 (336)
T ss_pred CeEEEEeccCCCcceEEE-eccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCC--CCCCcccccceeEEEEEeCCCCc
Confidence 789999988777788998 888888999999999999999999999988865322 23678899999999999999999
Q ss_pred CCCCCCEEEEecCCC-----------------CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcc
Q 017901 109 SLTVGQEVFGALHPT-----------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAAR 171 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~~-----------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~ 171 (364)
++++||+|++..... ...|+|++|+.++.+.++++|+++++.+++.++..+.+||+++...+.
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~ 157 (336)
T cd08276 78 RFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGP 157 (336)
T ss_pred CCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcC
Confidence 999999999875210 125889999999999999999999999999999999999999877789
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCC-hhHHHHhc-----CCccEEEEC
Q 017901 172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSS-KDIELAIK-----GKFDAVLDT 244 (364)
Q Consensus 172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~-~~~~~~i~-----g~~D~vid~ 244 (364)
+++|++++|+| +|.+|++++++|++.|++|+++.+++++ +.++++|++++++... .++...+. ..+|+++||
T Consensus 158 ~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~ 236 (336)
T cd08276 158 LKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEV 236 (336)
T ss_pred CCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEEC
Confidence 99999999996 8999999999999999999999877654 7777889998888765 44544443 139999999
Q ss_pred CCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHH
Q 017901 245 IGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRL 324 (364)
Q Consensus 245 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (364)
+++. .+..++++++++|+++.+|.... ... .......+.+++++.+.... ....+.+++++
T Consensus 237 ~~~~-~~~~~~~~l~~~G~~v~~g~~~~-----------~~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l 297 (336)
T cd08276 237 GGPG-TLAQSIKAVAPGGVISLIGFLSG-----------FEA------PVLLLPLLTKGATLRGIAVG-SRAQFEAMNRA 297 (336)
T ss_pred CChH-HHHHHHHhhcCCCEEEEEccCCC-----------Ccc------CcCHHHHhhcceEEEEEecC-cHHHHHHHHHH
Confidence 9976 88999999999999999986511 000 01111346778888887754 46788889999
Q ss_pred HHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 325 SETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 325 ~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
+.++.+.+..++.|++++++++++.+.+++..+|+++++
T Consensus 298 ~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 298 IEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred HHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 999988877788999999999999999888889999864
No 79
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=4.1e-36 Score=276.39 Aligned_cols=310 Identities=22% Similarity=0.267 Sum_probs=245.1
Q ss_pred eeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCC
Q 017901 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS 109 (364)
Q Consensus 30 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 109 (364)
||+++...+++..++++ +.|.|.+.++||+||+.++++|++|+..+.|..+. ....|.++|||++|+|+. +++..
T Consensus 1 ~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~--~~~~~ 75 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVE-TLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGV--VRSYPMIPGIDAAGTVVS--SEDPR 75 (323)
T ss_pred CeEEEccCCCCcceeEe-ecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCC--CCCCCccceeeeEEEEEe--cCCCC
Confidence 68888888888889999 99999999999999999999999999999886532 124588899999999998 55678
Q ss_pred CCCCCEEEEecCC--CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHh--cccCCCC-EEEEEcCC
Q 017901 110 LTVGQEVFGALHP--TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCA--ARMSEGQ-RLLVLGGG 184 (364)
Q Consensus 110 ~~~Gd~V~~~~~~--~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~--~~~~~g~-~vli~g~~ 184 (364)
|++||+|++.... ...+|+|++|+.++.+.++++|+++++.+++.+++.+++||.++... ..+.+|+ +++|+|++
T Consensus 76 ~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~ 155 (323)
T TIGR02823 76 FREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGAT 155 (323)
T ss_pred CCCCCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCC
Confidence 9999999987410 11358999999999999999999999999999999999998876433 3478898 99999988
Q ss_pred chHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhH-HHHhc-CCccEEEECCCCchhHHHHHhhccCC
Q 017901 185 GAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDI-ELAIK-GKFDAVLDTIGAPETERLGLNFLKRG 261 (364)
Q Consensus 185 g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~-~~~i~-g~~D~vid~~g~~~~~~~~~~~l~~~ 261 (364)
|.+|++++++|+.+|++++++++++++ +.++++|++++++.++.+. ...+. +++|+++||+|+. .+..++++++++
T Consensus 156 g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~ 234 (323)
T TIGR02823 156 GGVGSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDTVGGH-TLANVLAQLKYG 234 (323)
T ss_pred cHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHHHHHHhcCCCceEEEECccHH-HHHHHHHHhCCC
Confidence 999999999999999999988665554 7788999988887755432 11222 3389999999987 889999999999
Q ss_pred CEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-C----HHHHHHHHHHHHcCCceeccce
Q 017901 262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-D----AEGLEEIRRLSETGKLKIPVDK 336 (364)
Q Consensus 262 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~g~i~~~~~~ 336 (364)
|+++.+|.... .+. ......++.+++++.+..... . ...+..+.+++..+.+.+. .+
T Consensus 235 G~~v~~g~~~~-----------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 296 (323)
T TIGR02823 235 GAVAACGLAGG-----------PDL------PTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI-TR 296 (323)
T ss_pred CEEEEEcccCC-----------CCc------cccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc-ee
Confidence 99999986410 011 000112336677777755321 1 2245566667778877654 56
Q ss_pred eeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 337 TFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 337 ~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
.|+++++++||+.+.+++..+|+|+++
T Consensus 297 ~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 297 EITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred eecHHHHHHHHHHHhCCCccceEEEeC
Confidence 899999999999999999999999864
No 80
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=2.5e-36 Score=278.14 Aligned_cols=311 Identities=21% Similarity=0.257 Sum_probs=238.2
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||++++.++++..+.++ +.+.|.|.++||+||+.++++|++|.....+... ....+|.++|||++|+|++.| +.
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~V~~~~--~~ 75 (326)
T cd08289 1 FQALVVEKDEDDVSVSVK-NLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGK--IVKRYPFIPGIDLAGTVVESN--DP 75 (326)
T ss_pred CeeEEEeccCCcceeEEE-EccCCCCCCCeEEEEEEEEecChHHhhhhcCCcc--ccCCCCcCcccceeEEEEEcC--CC
Confidence 789999988887788899 9999999999999999999999999876653211 122458899999999999954 56
Q ss_pred CCCCCCEEEEecC--CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhc--c-cCCCCEEEEEcC
Q 017901 109 SLTVGQEVFGALH--PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAA--R-MSEGQRLLVLGG 183 (364)
Q Consensus 109 ~~~~Gd~V~~~~~--~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~--~-~~~g~~vli~g~ 183 (364)
.|++||+|++... ....+|+|++|+.++.+.++++|+++++.+++.+++++.|||+++.... . ..++++|+|+|+
T Consensus 76 ~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~ 155 (326)
T cd08289 76 RFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGA 155 (326)
T ss_pred CCCCCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcC
Confidence 7999999998741 1113599999999999999999999999999999999999998874332 2 345789999998
Q ss_pred CchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHh---c-CCccEEEECCCCchhHHHHHhhc
Q 017901 184 GGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAI---K-GKFDAVLDTIGAPETERLGLNFL 258 (364)
Q Consensus 184 ~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i---~-g~~D~vid~~g~~~~~~~~~~~l 258 (364)
+|.+|++++|+|+.+|++|+++++++++ +.++++|++++++.++.. .+.+ . +.+|++|||+|+. .+..+++++
T Consensus 156 ~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~-~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~l 233 (326)
T cd08289 156 TGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREELQ-EESIKPLEKQRWAGAVDPVGGK-TLAYLLSTL 233 (326)
T ss_pred CchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhHH-HHHHHhhccCCcCEEEECCcHH-HHHHHHHHh
Confidence 8999999999999999999999776655 778999998888865432 2222 1 2399999999996 899999999
Q ss_pred cCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC-----HHHHHHHHHHHHcCCceec
Q 017901 259 KRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD-----AEGLEEIRRLSETGKLKIP 333 (364)
Q Consensus 259 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g~i~~~ 333 (364)
+++|+++.+|.... .... .....++.+++++.+++.... .+.+..+...+....+...
T Consensus 234 ~~~G~~i~~g~~~~-----------~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (326)
T cd08289 234 QYGGSVAVSGLTGG-----------GEVE------TTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLKPTQLLNE 296 (326)
T ss_pred hcCCEEEEEeecCC-----------CCCC------cchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcCccccccc
Confidence 99999999986410 0110 001124467788877643211 1222333332222223334
Q ss_pred cceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 334 VDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 334 ~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
+++.|+++++++||+.+.+++..||+|+++
T Consensus 297 ~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 297 IKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred cceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 688999999999999999999999999874
No 81
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=2.5e-36 Score=277.67 Aligned_cols=304 Identities=29% Similarity=0.415 Sum_probs=250.4
Q ss_pred ecccCCCc--eEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCC
Q 017901 34 LPRFGGPE--VLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLT 111 (364)
Q Consensus 34 ~~~~g~~~--~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 111 (364)
++.++.+. .++++ +.+.|.+.+++|+||+.++++|+.|+..+.|.... ....|.++|+|++|+|+++|++++.++
T Consensus 3 ~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~ 79 (323)
T cd05282 3 YTQFGEPLPLVLELV-SLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS--RPPLPAVPGNEGVGVVVEVGSGVSGLL 79 (323)
T ss_pred eCcCCCCccceEEeE-eCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC--CCCCCCcCCcceEEEEEEeCCCCCCCC
Confidence 34455554 78888 88889999999999999999999999998876432 124578999999999999999999999
Q ss_pred CCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHH
Q 017901 112 VGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAA 191 (364)
Q Consensus 112 ~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~ 191 (364)
+||+|+++.. .|+|++|+.++.+.++++|+++++.+++.+++.+++||+++...+.+.+|++++|+|+.|.+|+++
T Consensus 80 ~Gd~V~~~~~----~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~ 155 (323)
T cd05282 80 VGQRVLPLGG----EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRML 155 (323)
T ss_pred CCCEEEEeCC----CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHH
Confidence 9999999862 389999999999999999999999999999999999999987878889999999999889999999
Q ss_pred HHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEE
Q 017901 192 VQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYM 265 (364)
Q Consensus 192 ~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v 265 (364)
+++|+.+|++++++++++++ +.++++|+++++++...++...+. ..+|++|||+|+. .....+++++++|+++
T Consensus 156 ~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~g~~v 234 (323)
T cd05282 156 IQLAKLLGFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGE-SATRLARSLRPGGTLV 234 (323)
T ss_pred HHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCH-HHHHHHHhhCCCCEEE
Confidence 99999999999998776654 777899999999887655555443 1399999999997 6778899999999999
Q ss_pred EEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-----C----HHHHHHHHHHHHcCCceeccce
Q 017901 266 TLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-----D----AEGLEEIRRLSETGKLKIPVDK 336 (364)
Q Consensus 266 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~~~~g~i~~~~~~ 336 (364)
.+|.... .+. . .....+..+++++.+..... . .+.+.++++++.++.+.+.+++
T Consensus 235 ~~g~~~~-----------~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~ 297 (323)
T cd05282 235 NYGLLSG-----------EPV----P--FPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGA 297 (323)
T ss_pred EEccCCC-----------CCC----C--CCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccc
Confidence 9986411 000 0 00112233677777766531 1 2467888999999999887889
Q ss_pred eeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 337 TFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 337 ~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
.|+++++++|++.+.+++..+|+|++
T Consensus 298 ~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 298 KFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred eecHHHHHHHHHHHhcCCCCceEeeC
Confidence 99999999999999998888999874
No 82
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=6.2e-36 Score=280.47 Aligned_cols=317 Identities=24% Similarity=0.272 Sum_probs=244.9
Q ss_pred eeeEEecccCCCceEEEcccccCCCC-CCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 107 (364)
||++++..+ +.++++ ++|.|.+ .++||+||+.++++|++|++.+.|..+ ..+|+++|||++|+|+++|+++
T Consensus 1 m~~~~~~~~---~~~~~~-~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~----~~~p~~~g~e~~G~V~~vG~~v 72 (375)
T cd08282 1 MKAVVYGGP---GNVAVE-DVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG----AEPGLVLGHEAMGEVEEVGSAV 72 (375)
T ss_pred CceEEEecC---CceeEE-eCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC----CCCCceeccccEEEEEEeCCCC
Confidence 678888744 458899 9999985 799999999999999999999988653 2468899999999999999999
Q ss_pred CCCCCCCEEEEecCC---------------------------------CCCCCcceeEEeecCC--ccccCCCCCChh--
Q 017901 108 RSLTVGQEVFGALHP---------------------------------TAVRGTYADYAVLSED--ELTPKPVSVTHA-- 150 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~---------------------------------~~~~g~~~~~~~~~~~--~~~~ip~~~~~~-- 150 (364)
+.+++||+|++.... ...+|+|++|+.++.+ .++++|+++++.
T Consensus 73 ~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~ 152 (375)
T cd08282 73 ESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEK 152 (375)
T ss_pred CcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhh
Confidence 999999999873210 0124899999999976 899999999998
Q ss_pred -hhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCC
Q 017901 151 -DASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSS 227 (364)
Q Consensus 151 -~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~ 227 (364)
+++.++.++.|||+++ ..+++.+|++|+|.| .|.+|++++|+|+.+|+ +|+++.+++++ +.++++|+. .+++++
T Consensus 153 ~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~ 229 (375)
T cd08282 153 DDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFG-AGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFSD 229 (375)
T ss_pred hheeeecchHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccCc
Confidence 5677888899999998 788999999999977 79999999999999998 78887666554 778899984 566665
Q ss_pred hhHHHHhc----CCccEEEECCCCch-----------hHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHH
Q 017901 228 KDIELAIK----GKFDAVLDTIGAPE-----------TERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLL 292 (364)
Q Consensus 228 ~~~~~~i~----g~~D~vid~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 292 (364)
.++...+. +.+|++|||+|+.. .+..++++++++|+++.+|..... .......... ....
T Consensus 230 ~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~---~~~~~~~~~~--~~~~ 304 (375)
T cd08282 230 GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAE---DPGAGDAAAK--QGEL 304 (375)
T ss_pred ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCc---cccccccccc--Cccc
Confidence 55544433 23999999999862 378999999999999988764110 0000000000 0011
Q ss_pred HHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 293 KKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
.+....++.++..+.+.... ..+.+..++++++++++++ .+++.|+++++++|++.+.+++ .+|+|+++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~ 375 (375)
T cd08282 305 SFDFGLLWAKGLSFGTGQAP-VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP 375 (375)
T ss_pred cccHHHHHhcCcEEEEecCC-chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 11222345556666555432 4567888999999999987 3889999999999999999888 89999863
No 83
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=6.9e-36 Score=277.19 Aligned_cols=306 Identities=25% Similarity=0.387 Sum_probs=248.1
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
||++++++++ .+.++ +.+.|.+.+++|+||+.++++|++|+..+.|..+ +...|.++|+|++|+|+++|++++
T Consensus 1 ~~~~~~~~~~---~~~~~-~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~---~~~~~~~~g~~~~G~V~~~G~~v~ 73 (343)
T cd08235 1 MKAAVLHGPN---DVRLE-EVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT---DLKPPRILGHEIAGEIVEVGDGVT 73 (343)
T ss_pred CeEEEEecCC---ceEEE-EccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc---cCCCCcccccceEEEEEeeCCCCC
Confidence 6889998665 47888 8999999999999999999999999999888542 224577899999999999999999
Q ss_pred CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCc-----cccCCCCCChhhhccccchHH
Q 017901 109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDE-----LTPKPVSVTHADASAIPFAAL 160 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~-----~~~ip~~~~~~~aa~~~~~~~ 160 (364)
.+++||+|+++... ....|+|++|+.++.+. ++++|+++++.+++.+ ..+.
T Consensus 74 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ 152 (343)
T cd08235 74 GFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLA 152 (343)
T ss_pred CCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHH
Confidence 99999999986320 01358999999999998 9999999999998776 7788
Q ss_pred HHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc---
Q 017901 161 TAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK--- 235 (364)
Q Consensus 161 ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~--- 235 (364)
+||+++. ...+++|++|+|+| +|.+|++++|+|+..|++ |+++.+++++ +.+.++|.++++++++.++.+.+.
T Consensus 153 ~a~~~l~-~~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~ 230 (343)
T cd08235 153 CCINAQR-KAGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELT 230 (343)
T ss_pred HHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHh
Confidence 9999984 56899999999997 799999999999999998 8888665554 677889999899887766655443
Q ss_pred -C-CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc
Q 017901 236 -G-KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA 313 (364)
Q Consensus 236 -g-~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (364)
+ ++|++|||+|+...+..++++++++|+++.+|.... .... .........+++.+.+.+..
T Consensus 231 ~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~----------~~~~------~~~~~~~~~~~~~l~~~~~~- 293 (343)
T cd08235 231 DGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPK----------GSTV------NIDPNLIHYREITITGSYAA- 293 (343)
T ss_pred CCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCC----------CCCc------ccCHHHHhhCceEEEEEecC-
Confidence 2 399999999976688899999999999999986411 0000 01112345567777666543
Q ss_pred CHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 314 DAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 314 ~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
..+.++.++++++++.+.+ .+...|+++++++|++.+.+++ .+|+|+.
T Consensus 294 ~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 294 SPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred ChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 4677889999999999873 4677899999999999999999 8999873
No 84
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=6.2e-36 Score=277.29 Aligned_cols=307 Identities=24% Similarity=0.258 Sum_probs=241.8
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCcc--------ccCCCCCcccccceeEEE
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRS--------IFEPLLPLILGRDISGEV 100 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~--------~~~~~~p~~~G~e~~G~V 100 (364)
|||+++... .++++ +.+.|+++++||+|++.++++|++|+....|.... .....+|.++|+|++|+|
T Consensus 1 m~a~~~~~~----~~~~~-~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V 75 (341)
T cd08262 1 MRAAVFRDG----PLVVR-DVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEV 75 (341)
T ss_pred CceEEEeCC----ceEEE-ecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEE
Confidence 688888744 58888 99999999999999999999999999998873210 011235788999999999
Q ss_pred EeecCCCCC-CCCCCEEEEecCCC-------------CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHH
Q 017901 101 AAVGASVRS-LTVGQEVFGALHPT-------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL 166 (364)
Q Consensus 101 ~~vG~~~~~-~~~Gd~V~~~~~~~-------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l 166 (364)
+++|++++. |++||+|++..... ...|+|++|+.++.+.++++|+++++++++ ++.++.+||+++
T Consensus 76 ~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~ 154 (341)
T cd08262 76 VDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV 154 (341)
T ss_pred EEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH
Confidence 999999987 99999999873210 135899999999999999999999999877 667888999986
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEE-EeeCCccH-HHHHHcCCceeeeCCChhHHH-------Hhc-C
Q 017901 167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVS-ATCGSKSI-DRVLAAGAEQAVDYSSKDIEL-------AIK-G 236 (364)
Q Consensus 167 ~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi-~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~-------~i~-g 236 (364)
..+++++|++|+|+| +|.+|.+++|+|+.+|++++ ++.+++++ ..++++|++++++++..+... ... +
T Consensus 155 -~~~~~~~g~~VlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~ 232 (341)
T cd08262 155 -RRARLTPGEVALVIG-CGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGP 232 (341)
T ss_pred -HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCC
Confidence 788999999999997 69999999999999999754 44444444 777899998888876542211 111 2
Q ss_pred CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHH
Q 017901 237 KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAE 316 (364)
Q Consensus 237 ~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (364)
.+|++|||+|+...+..++++++++|+++.+|.... ..... .. ....+++++.+.... ..+
T Consensus 233 ~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~----------~~~~~---~~-----~~~~~~~~~~~~~~~-~~~ 293 (341)
T cd08262 233 KPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCME----------SDNIE---PA-----LAIRKELTLQFSLGY-TPE 293 (341)
T ss_pred CCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCC----------CCccC---HH-----HHhhcceEEEEEecc-cHH
Confidence 399999999985478889999999999999986511 00000 10 123456666655433 456
Q ss_pred HHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 317 GLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 317 ~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
.+.+++++++++.+.+ .+++.|+++++++|++.+.+++..+|+|++
T Consensus 294 ~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 294 EFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred HHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 8889999999999975 357899999999999999999988999974
No 85
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1e-35 Score=273.04 Aligned_cols=312 Identities=28% Similarity=0.413 Sum_probs=250.3
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
||++++...+.++.+.+. +.+.|.+.++||+||+.++++|++|+....|..+ ....|.++|||++|+|+++|+ .
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~--~ 74 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLR-EIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP---SVKFPRVLGIEAVGEVEEAPG--G 74 (320)
T ss_pred CeEEEEcCCCCccceEEe-ecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC---CCCCCccccceeEEEEEEecC--C
Confidence 688899877776778888 8888889999999999999999999999888542 224578899999999999995 5
Q ss_pred CCCCCCEEEEecCC--CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCch
Q 017901 109 SLTVGQEVFGALHP--TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGA 186 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~--~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~ 186 (364)
.+++||+|+++... ....|+|++|+.++.+.++++|+++++.+++.++.++.|||+++.+...+++|++++|+|++|.
T Consensus 75 ~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~ 154 (320)
T cd08243 75 TFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSS 154 (320)
T ss_pred CCCCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCCh
Confidence 79999999987531 1135899999999999999999999999999999999999999987788999999999999999
Q ss_pred HHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHh---cCCccEEEECCCCchhHHHHHhhccCCC
Q 017901 187 VGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAI---KGKFDAVLDTIGAPETERLGLNFLKRGG 262 (364)
Q Consensus 187 ~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i---~g~~D~vid~~g~~~~~~~~~~~l~~~G 262 (364)
+|++++|+|+.+|++|+++++++++ +.+.++|++++++. ..++.+.+ .+++|+++||+|+. .+..++++++++|
T Consensus 155 ~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~i~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g 232 (320)
T cd08243 155 VGLAALKLAKALGATVTATTRSPERAALLKELGADEVVID-DGAIAEQLRAAPGGFDKVLELVGTA-TLKDSLRHLRPGG 232 (320)
T ss_pred HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEec-CccHHHHHHHhCCCceEEEECCChH-HHHHHHHHhccCC
Confidence 9999999999999999999876655 77888999887754 33433333 22399999999986 8999999999999
Q ss_pred EEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-CHHHHHHHHHHHHcCCceeccceeeccc
Q 017901 263 HYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-DAEGLEEIRRLSETGKLKIPVDKTFHMT 341 (364)
Q Consensus 263 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~i~~~~~~~~~l~ 341 (364)
+++.+|.... .......... . .....+++.+.+++... ....+..++++++++.+++..++.|+++
T Consensus 233 ~~v~~g~~~~----------~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (320)
T cd08243 233 IVCMTGLLGG----------QWTLEDFNPM--D-DIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPSKVFTFD 299 (320)
T ss_pred EEEEEccCCC----------CcccCCcchh--h-hhhhccceEEEecchhhhhHHHHHHHHHHHHCCceecccccEEcHH
Confidence 9999986411 0000000000 0 01134566666655321 2356888999999999988788899999
Q ss_pred cHHHHHHHHhcCCCCCeEEE
Q 017901 342 QVREAHEAKDKRLIPGKVVL 361 (364)
Q Consensus 342 ~~~eA~~~~~~~~~~gkvvi 361 (364)
++++|++.+.++...+|+|+
T Consensus 300 ~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 300 EIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred HHHHHHHHHHhCCCCCcEEe
Confidence 99999999998888889886
No 86
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=6.8e-36 Score=277.35 Aligned_cols=304 Identities=25% Similarity=0.345 Sum_probs=244.6
Q ss_pred eeeEEecccCCCceEEEcccccCCCCC-CCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 107 (364)
|+++++..+ ..++++ +.+.|.|. ++||+|++.++++|++|+....|..+ ...|.++|+|++|+|+++|+++
T Consensus 1 ~~a~~~~~~---~~~~~~-~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v 72 (344)
T cd08284 1 MKAVVFKGP---GDVRVE-EVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP----STPGFVLGHEFVGEVVEVGPEV 72 (344)
T ss_pred CeeEEEecC---CCceEE-eccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCCcccccceEEEEEeeCCCc
Confidence 678898854 458999 99999885 99999999999999999999888543 2457789999999999999999
Q ss_pred CCCCCCCEEEEecCC---------------------------CCCCCcceeEEeecCC--ccccCCCCCChhhhccccch
Q 017901 108 RSLTVGQEVFGALHP---------------------------TAVRGTYADYAVLSED--ELTPKPVSVTHADASAIPFA 158 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~---------------------------~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa~~~~~ 158 (364)
+.+++||+|++.... ...+|+|++|+.++.+ .++++|+++++.+++.++.+
T Consensus 73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~ 152 (344)
T cd08284 73 RTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDI 152 (344)
T ss_pred cccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCc
Confidence 999999999986411 0125899999999965 99999999999999999999
Q ss_pred HHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-
Q 017901 159 ALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK- 235 (364)
Q Consensus 159 ~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~- 235 (364)
++|||+++. ...+.+|++|+|+| +|.+|++++++|+.+|+ +++++.+++++ ..+.++|+. .++.+..++...+.
T Consensus 153 ~~ta~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~l~~ 229 (344)
T cd08284 153 LPTGYFGAK-RAQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAEPVERVRE 229 (344)
T ss_pred hHHHHhhhH-hcCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHHHHHHH
Confidence 999999984 58899999999997 79999999999999997 88888665544 677889975 46665544444332
Q ss_pred ----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEe
Q 017901 236 ----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYM 311 (364)
Q Consensus 236 ----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (364)
+++|++|||+|+...+..++++++++|+++.+|.... .... ......+.+++++.+..
T Consensus 230 ~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~-----------~~~~------~~~~~~~~~~~~~~~~~- 291 (344)
T cd08284 230 ATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTA-----------EEFP------FPGLDAYNKNLTLRFGR- 291 (344)
T ss_pred HhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCC-----------CCcc------ccHHHHhhcCcEEEEec-
Confidence 2399999999986688999999999999999986511 0100 01112345666665543
Q ss_pred ccCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 312 RADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 312 ~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
....+.+..+++++.++.+++ .+++.|+++++++|++.+.+++. +|+|++
T Consensus 292 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 292 CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 224678999999999999886 36789999999999999998887 999986
No 87
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=1.9e-35 Score=273.45 Aligned_cols=308 Identities=30% Similarity=0.418 Sum_probs=250.0
Q ss_pred eeeEEecccCCCc---eEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecC
Q 017901 29 CRAVVLPRFGGPE---VLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGA 105 (364)
Q Consensus 29 ~~a~~~~~~g~~~---~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~ 105 (364)
|+++++++++.++ .+..+ +.+.|.+.+++|+|++.++++|++|+..+.+..+ ....|.++|||++|+|+++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~~G~ 76 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDI-ELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP---VPGQPKILGWDASGVVEAVGS 76 (336)
T ss_pred CceEEecCCCCCCcccceeEc-cCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC---CCCCCcccccceEEEEEEcCC
Confidence 6899999888775 58888 8888899999999999999999999998877543 124577899999999999999
Q ss_pred CCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCC-----CCEEEE
Q 017901 106 SVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSE-----GQRLLV 180 (364)
Q Consensus 106 ~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-----g~~vli 180 (364)
+++.|++||+|++.... ..+|+|++|+.++.++++++|++++.++++.+++.+.+||+++.+.+.+.+ |++++|
T Consensus 77 ~v~~~~~Gd~V~~~~~~-~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV 155 (336)
T cd08252 77 EVTLFKVGDEVYYAGDI-TRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLI 155 (336)
T ss_pred CCCCCCCCCEEEEcCCC-CCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEE
Confidence 99999999999987421 135899999999999999999999999999999999999999877788887 999999
Q ss_pred EcCCchHHHHHHHHHHHcC-CeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchhHHHH
Q 017901 181 LGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLG 254 (364)
Q Consensus 181 ~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~ 254 (364)
+|+.|.+|++++++|+.+| ++|+++++++++ +.+.++|++++++... ++...+. +++|++|||+|+...+..+
T Consensus 156 ~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~ 234 (336)
T cd08252 156 IGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQ-DLAEQLEALGIEPVDYIFCLTDTDQHWDAM 234 (336)
T ss_pred EcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cHHHHHHhhCCCCCCEEEEccCcHHHHHHH
Confidence 9989999999999999999 999999776554 7788999998888764 3433332 2399999999975589999
Q ss_pred HhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-----------CHHHHHHHHH
Q 017901 255 LNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-----------DAEGLEEIRR 323 (364)
Q Consensus 255 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 323 (364)
+++++++|+++.+|.... .. ....+..+++++.+.+... ....+.++++
T Consensus 235 ~~~l~~~g~~v~~g~~~~------------~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (336)
T cd08252 235 AELIAPQGHICLIVDPQE------------PL--------DLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVAD 294 (336)
T ss_pred HHHhcCCCEEEEecCCCC------------cc--------cchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHH
Confidence 999999999999985400 00 0112234566665543311 1245788999
Q ss_pred HHHcCCceeccc---eeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 324 LSETGKLKIPVD---KTFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 324 ~~~~g~i~~~~~---~~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
++.++.+.+... +.++++++++|++.+.++...+|++++
T Consensus 295 ~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 295 LLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred HHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 999999987533 357999999999999999988999874
No 88
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.5e-35 Score=270.95 Aligned_cols=309 Identities=35% Similarity=0.570 Sum_probs=254.3
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||+++.+++.++.++++ +.+.|.+.+++|+|++.++++|++|+....|.... ....|.++|||++|+|+.+|+++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~~~ 77 (326)
T cd08272 1 MKALVLESFGGPEVFELR-EVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAA--RPPLPAILGCDVAGVVEAVGEGVT 77 (326)
T ss_pred CeEEEEccCCCchheEEe-ecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccccceeEEEEEeCCCCC
Confidence 789999988888788898 88888899999999999999999999998875431 123577899999999999999999
Q ss_pred CCCCCCEEEEecCCC-CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchH
Q 017901 109 SLTVGQEVFGALHPT-AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV 187 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~ 187 (364)
+|++||+|+++.... ...|+|++|+.++.+.++++|+++++.+++.++..+.+||+++.+...+++|++++|+|+++.+
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~ 157 (326)
T cd08272 78 RFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGV 157 (326)
T ss_pred CCCCCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcH
Confidence 999999999875211 1248999999999999999999999999999999999999998788999999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc----C-CccEEEECCCCchhHHHHHhhccCCC
Q 017901 188 GFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----G-KFDAVLDTIGAPETERLGLNFLKRGG 262 (364)
Q Consensus 188 G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~----g-~~D~vid~~g~~~~~~~~~~~l~~~G 262 (364)
|++++++|+..|++|++++++++.+.++++|.+.+++.... +.+.+. + .+|+++||+|+. .+..++++++++|
T Consensus 158 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g 235 (326)
T cd08272 158 GHVAVQLAKAAGARVYATASSEKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGE-TLDASFEAVALYG 235 (326)
T ss_pred HHHHHHHHHHcCCEEEEEechHHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChH-HHHHHHHHhccCC
Confidence 99999999999999999987744477888999888877655 544443 1 399999999997 7888999999999
Q ss_pred EEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----------CHHHHHHHHHHHHcCCcee
Q 017901 263 HYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA----------DAEGLEEIRRLSETGKLKI 332 (364)
Q Consensus 263 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~g~i~~ 332 (364)
+++.+|... .. .+. ....+++.+.+..... ....+..+++++.++.+.+
T Consensus 236 ~~v~~~~~~-------------~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 294 (326)
T cd08272 236 RVVSILGGA-------------TH----DLA----PLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRP 294 (326)
T ss_pred EEEEEecCC-------------cc----chh----hHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccc
Confidence 999998640 00 000 1124555555554321 1456888899999999887
Q ss_pred ccc-eeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 333 PVD-KTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 333 ~~~-~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
.++ +.|+++++++|++.+.++...+|+++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 295 LLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred ccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 765 8999999999999998888889999874
No 89
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=9.6e-36 Score=273.47 Aligned_cols=292 Identities=22% Similarity=0.267 Sum_probs=234.6
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||+++.++ +.++++ +.+.|++.++||+||+.++++|++|+....|.. ..|.++|||++|+|+++|++
T Consensus 1 ~~a~~~~~~---~~~~~~-~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~------~~~~~~G~e~~G~Vv~~G~~-- 68 (319)
T cd08242 1 MKALVLDGG---LDLRVE-DLPKPEPPPGEALVRVLLAGICNTDLEIYKGYY------PFPGVPGHEFVGIVEEGPEA-- 68 (319)
T ss_pred CeeEEEeCC---CcEEEE-ECCCCCCCCCeEEEEEEEEEEccccHHHHcCCC------CCCCccCceEEEEEEEeCCC--
Confidence 689999854 358999 999999999999999999999999999998854 25789999999999999998
Q ss_pred CCCCCCEEEEecCC------------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901 109 SLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 164 (364)
+++||+|...... ...+|+|++|+.++.++++++|++++.++++.+ ....++|.
T Consensus 69 -~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~ 146 (319)
T cd08242 69 -ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALE 146 (319)
T ss_pred -CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHH
Confidence 6799999753211 013689999999999999999999999888764 34446776
Q ss_pred HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEE
Q 017901 165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLD 243 (364)
Q Consensus 165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid 243 (364)
++ +..+++++++++|+| +|.+|++++|+|+.+|++|+++++++++ +.++++|++.++++... .-.+.+|++||
T Consensus 147 ~~-~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~d~vid 220 (319)
T cd08242 147 IL-EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAE----SEGGGFDVVVE 220 (319)
T ss_pred HH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCcccc----ccCCCCCEEEE
Confidence 65 778999999999997 7999999999999999999998776554 78888999888776432 11123999999
Q ss_pred CCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHH
Q 017901 244 TIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRR 323 (364)
Q Consensus 244 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (364)
|+|+...+..++++++++|+++..+.... .. .+.+..+..++.++.+.+.. .++++++
T Consensus 221 ~~g~~~~~~~~~~~l~~~g~~v~~~~~~~------------~~------~~~~~~~~~~~~~i~~~~~~----~~~~~~~ 278 (319)
T cd08242 221 ATGSPSGLELALRLVRPRGTVVLKSTYAG------------PA------SFDLTKAVVNEITLVGSRCG----PFAPALR 278 (319)
T ss_pred CCCChHHHHHHHHHhhcCCEEEEEcccCC------------CC------ccCHHHheecceEEEEEecc----cHHHHHH
Confidence 99986588999999999999998764310 11 11122355677788776543 2788899
Q ss_pred HHHcCCce--eccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 324 LSETGKLK--IPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 324 ~~~~g~i~--~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
++++++++ +.+++.|+++++++||+.+.++. .+|+|+++
T Consensus 279 ~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 279 LLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP 319 (319)
T ss_pred HHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 99999994 55889999999999999998776 48999864
No 90
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=2.9e-35 Score=272.41 Aligned_cols=313 Identities=35% Similarity=0.487 Sum_probs=257.8
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||+++...+.+..+.+. +.+.|.+.+++|+|++.++++|++|+..+.|..+. ...+|.++|||++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~G~~~~ 77 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYG-DLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGI--KLPLPHILGSDGAGVVEAVGPGVT 77 (342)
T ss_pred CeEEEEecCCCccceeEe-ecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCC--CCCCCeecccceEEEEEEeCCCCC
Confidence 689998877777788888 88888899999999999999999999999885431 234578999999999999999999
Q ss_pred CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901 109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA 165 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~ 165 (364)
.|++||+|++.... ....|+|++|+.++.+.++++|+++++.+++.++.++.+||++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~ 157 (342)
T cd08266 78 NVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHM 157 (342)
T ss_pred CCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHH
Confidence 99999999986321 0135889999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCcc
Q 017901 166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFD 239 (364)
Q Consensus 166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D 239 (364)
+.+...+.++++++|+|+++.+|++++++++..|++|+.+.+++++ +.+...+.+.+++....++...+. +++|
T Consensus 158 l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 237 (342)
T cd08266 158 LVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVD 237 (342)
T ss_pred HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCCc
Confidence 8778899999999999998999999999999999999988776554 667778887777766554443332 2399
Q ss_pred EEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHH
Q 017901 240 AVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLE 319 (364)
Q Consensus 240 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (364)
+++|++|+. .+..++++++++|+++.+|.... .... ......+.+++.+.+.+.. ....+.
T Consensus 238 ~~i~~~g~~-~~~~~~~~l~~~G~~v~~~~~~~----------~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~ 298 (342)
T cd08266 238 VVVEHVGAA-TWEKSLKSLARGGRLVTCGATTG----------YEAP-------IDLRHVFWRQLSILGSTMG-TKAELD 298 (342)
T ss_pred EEEECCcHH-HHHHHHHHhhcCCEEEEEecCCC----------CCCC-------cCHHHHhhcceEEEEEecC-CHHHHH
Confidence 999999987 88999999999999999986511 0000 0111234567777777654 467888
Q ss_pred HHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 320 EIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 320 ~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
.++++++++.+.+.+++.|+++++++|++.+.++...+|+++++
T Consensus 299 ~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 299 EALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred HHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 99999999999888889999999999999999888889999863
No 91
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=2.2e-35 Score=273.75 Aligned_cols=306 Identities=25% Similarity=0.339 Sum_probs=245.6
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||+++++.+ .+.++ +.+.|++.++||+||+.++++|++|+....+.. ....|.++|+|++|+|+++|++++
T Consensus 1 ~~a~~~~~~~---~l~~~-~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~----~~~~~~~~g~~~~G~V~~~g~~v~ 72 (343)
T cd08236 1 MKALVLTGPG---DLRYE-DIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG----AYHPPLVLGHEFSGTVEEVGSGVD 72 (343)
T ss_pred CeeEEEecCC---ceeEE-ecCCCCCCCCeEEEEEEEEEECccchHhhcCCC----CCCCCcccCcceEEEEEEECCCCC
Confidence 6899999654 47888 999999999999999999999999999887753 224577899999999999999999
Q ss_pred CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901 109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA 165 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~ 165 (364)
.|++||+|+++... ....|+|++|+.++.+.++++|+++++.+++.+ ..+.+||++
T Consensus 73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~ 151 (343)
T cd08236 73 DLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHA 151 (343)
T ss_pred cCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHH
Confidence 99999999986210 013589999999999999999999999999887 567899999
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----C-Cc
Q 017901 166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----G-KF 238 (364)
Q Consensus 166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g-~~ 238 (364)
+. ...++++++++|+| +|.+|++++|+|+.+|++ |++++++++. +.+.++|++.+++++... ...+. + ++
T Consensus 152 l~-~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~~~~~ 228 (343)
T cd08236 152 VR-LAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED-VEKVRELTEGRGA 228 (343)
T ss_pred HH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcccc-HHHHHHHhCCCCC
Confidence 84 78899999999997 699999999999999997 8888776654 777889998888876554 43332 2 29
Q ss_pred cEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----C
Q 017901 239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA----D 314 (364)
Q Consensus 239 D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 314 (364)
|++|||+|+...+..++++|+++|+++.+|.... ... .....+..++.+++++.+++... .
T Consensus 229 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (343)
T cd08236 229 DLVIEAAGSPATIEQALALARPGGKVVLVGIPYG-----------DVT----LSEEAFEKILRKELTIQGSWNSYSAPFP 293 (343)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCC-----------Ccc----cccCCHHHHHhcCcEEEEEeeccccccc
Confidence 9999999876688999999999999999985411 000 00001112346677877776531 1
Q ss_pred HHHHHHHHHHHHcCCce--eccceeeccccHHHHHHHHhc-CCCCCeEEE
Q 017901 315 AEGLEEIRRLSETGKLK--IPVDKTFHMTQVREAHEAKDK-RLIPGKVVL 361 (364)
Q Consensus 315 ~~~~~~~~~~~~~g~i~--~~~~~~~~l~~~~eA~~~~~~-~~~~gkvvi 361 (364)
.+.+++++++++++.+. +.+.+.+++++++++++.+.+ +...+|+|+
T Consensus 294 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 294 GDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred hhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 56788899999999886 346788999999999999998 666778874
No 92
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=7.1e-35 Score=271.33 Aligned_cols=327 Identities=27% Similarity=0.454 Sum_probs=244.4
Q ss_pred eeEEecccCCCceEEEcccccCCC-CCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 30 RAVVLPRFGGPEVLEVRPNVEVPD-LKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 30 ~a~~~~~~g~~~~~~~~~~~~~p~-~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|++++.+++++..++.. +.|.|. +.+++|+||+.++++|++|+..+.+.... ....|.++|+|++|+|+++|++++
T Consensus 2 ~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~V~~vG~~v~ 78 (352)
T cd08247 2 KALTFKNNTSPLTITTI-KLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFH--FKVKEKGLGRDYSGVIVKVGSNVA 78 (352)
T ss_pred ceEEEecCCCcceeecc-CCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccc--cccCCCccCceeEEEEEEeCcccc
Confidence 68899988888666666 666664 59999999999999999999887653211 112377899999999999999998
Q ss_pred -CCCCCCEEEEecCCC-CCCCcceeEEeecCC----ccccCCCCCChhhhccccchHHHHHHHHHHhc-ccCCCCEEEEE
Q 017901 109 -SLTVGQEVFGALHPT-AVRGTYADYAVLSED----ELTPKPVSVTHADASAIPFAALTAWRALKCAA-RMSEGQRLLVL 181 (364)
Q Consensus 109 -~~~~Gd~V~~~~~~~-~~~g~~~~~~~~~~~----~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~vli~ 181 (364)
.|++||+|++..... ...|+|++|+.++.. .++++|+++++.+++.++.++.|||+++.+.. .+++|++++|+
T Consensus 79 ~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ 158 (352)
T cd08247 79 SEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVL 158 (352)
T ss_pred cCCCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEE
Confidence 899999999875211 125899999999987 78999999999999999999999999987666 79999999999
Q ss_pred cCCchHHHHHHHHHHHc-CC-eEEEeeCCccHHHHHHcCCceeeeCCChh---HHHHh------cCCccEEEECCCCchh
Q 017901 182 GGGGAVGFAAVQFSVAS-GC-HVSATCGSKSIDRVLAAGAEQAVDYSSKD---IELAI------KGKFDAVLDTIGAPET 250 (364)
Q Consensus 182 g~~g~~G~~~~~~a~~~-g~-~vi~~~~~~~~~~~~~~g~~~v~~~~~~~---~~~~i------~g~~D~vid~~g~~~~ 250 (364)
|+++.+|++++++|+.+ |. .++++.+.++...++++|++++++++..+ +...+ .+.+|++|||+|+...
T Consensus 159 ga~~~vg~~~~~~a~~~~~~~~v~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~ 238 (352)
T cd08247 159 GGSTSVGRFAIQLAKNHYNIGTVVGTCSSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDL 238 (352)
T ss_pred CCCchHHHHHHHHHHhcCCcceEEEEeChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHH
Confidence 99999999999999987 44 67777665555677899999888876544 32221 1239999999999558
Q ss_pred HHHHHhhcc---CCCEEEEEccCchhhhhccccccccc--hhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHH
Q 017901 251 ERLGLNFLK---RGGHYMTLHGETAALADHYGLALGLP--IATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLS 325 (364)
Q Consensus 251 ~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (364)
...++++++ ++|+++.+++.... .+......+ .... ...............+.........+.+..+++++
T Consensus 239 ~~~~~~~l~~~~~~G~~v~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (352)
T cd08247 239 FPHINSILKPKSKNGHYVTIVGDYKA---NYKKDTFNSWDNPSA-NARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELI 314 (352)
T ss_pred HHHHHHHhCccCCCCEEEEEeCCCcc---cccchhhhhccccch-hhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHH
Confidence 889999999 99999987543100 000000000 0000 00000011223333444333322346788899999
Q ss_pred HcCCceeccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 326 ETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 326 ~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
.++.+++.+++.|+++++++|++.+.+++..||+++++
T Consensus 315 ~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 315 ADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred hCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 99999887888999999999999999999889999864
No 93
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=1.7e-35 Score=272.54 Aligned_cols=300 Identities=30% Similarity=0.430 Sum_probs=240.4
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
||++++..++ .+.++++ +.+.|+++++||+|++.++++|++|+..+.+.. ...+|.++|||++|+|+++|++++
T Consensus 1 ~~~~~~~~~~-~~~~~~~-~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~ 74 (325)
T cd08264 1 MKALVFEKSG-IENLKVE-DVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK----VKPMPHIPGAEFAGVVEEVGDHVK 74 (325)
T ss_pred CeeEEeccCC-CCceEEE-eccCCCCCCCeEEEEEEEEEechHHHHHHhCCC----CCCCCeecccceeEEEEEECCCCC
Confidence 6889998766 6678888 888888999999999999999999999877521 113577899999999999999999
Q ss_pred CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901 109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA 165 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~ 165 (364)
.|++||+|+..... ....|+|++|+.++.+.++++|+++++++++.+++++.+||++
T Consensus 75 ~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~ 154 (325)
T cd08264 75 GVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHA 154 (325)
T ss_pred CCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHH
Confidence 99999999976320 0135899999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCCh--hHHHHhcCCccEEEE
Q 017901 166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSK--DIELAIKGKFDAVLD 243 (364)
Q Consensus 166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~--~~~~~i~g~~D~vid 243 (364)
+. .+++++|++++|+|++|.+|++++++|+.+|++|+++.+ .+.++++|++++++..+. .+.....+ +|+++|
T Consensus 155 l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~---~~~~~~~g~~~~~~~~~~~~~l~~~~~~-~d~vl~ 229 (325)
T cd08264 155 LK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR---KDWLKEFGADEVVDYDEVEEKVKEITKM-ADVVIN 229 (325)
T ss_pred HH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH---HHHHHHhCCCeeecchHHHHHHHHHhCC-CCEEEE
Confidence 85 489999999999998899999999999999999988863 356678999888876531 12221234 999999
Q ss_pred CCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHH
Q 017901 244 TIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRR 323 (364)
Q Consensus 244 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (364)
++|+. .+..++++++++|+++.+|.... .. ..++...+..++..+.+.... .++.+.++++
T Consensus 230 ~~g~~-~~~~~~~~l~~~g~~v~~g~~~~-----------~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 290 (325)
T cd08264 230 SLGSS-FWDLSLSVLGRGGRLVTFGTLTG-----------GE------VKLDLSDLYSKQISIIGSTGG-TRKELLELVK 290 (325)
T ss_pred CCCHH-HHHHHHHhhccCCEEEEEecCCC-----------CC------CccCHHHHhhcCcEEEEccCC-CHHHHHHHHH
Confidence 99986 89999999999999999986310 00 111122344556667776543 4678888999
Q ss_pred HHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEE
Q 017901 324 LSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVV 360 (364)
Q Consensus 324 ~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvv 360 (364)
++...+ ..+++.|+++|+++|++.+.++...+|++
T Consensus 291 l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv~ 325 (325)
T cd08264 291 IAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRIL 325 (325)
T ss_pred HHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCccccC
Confidence 986443 45678899999999999999888777753
No 94
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.3e-35 Score=273.61 Aligned_cols=302 Identities=24% Similarity=0.255 Sum_probs=237.6
Q ss_pred EEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccC-CccccCCCCCcccccceeEEEEeecCCCCCC
Q 017901 32 VVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGY-GRSIFEPLLPLILGRDISGEVAAVGASVRSL 110 (364)
Q Consensus 32 ~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~-~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 110 (364)
.++..+ ..++++ +.+.|.|.++||+|++.++++|++|++.+.+. ...+ ....|.++|+|++|+|+++|+++++|
T Consensus 2 ~~~~~~---~~~~~~-~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~g~e~~G~V~~vG~~v~~~ 76 (343)
T cd05285 2 AVLHGP---GDLRLE-ERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDF-VVKEPMVLGHESAGTVVAVGSGVTHL 76 (343)
T ss_pred ceEecC---CceeEE-ECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCccc-CCCCCcccCcceeEEEEeeCCCCCCC
Confidence 455533 458888 99999999999999999999999999876432 1111 12457789999999999999999999
Q ss_pred CCCCEEEEec------------------------CCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHH
Q 017901 111 TVGQEVFGAL------------------------HPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRAL 166 (364)
Q Consensus 111 ~~Gd~V~~~~------------------------~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l 166 (364)
++||+|++.. ......|+|++|++++.+.++++|+++++.+++.+ .++.+||+++
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~ 155 (343)
T cd05285 77 KVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC 155 (343)
T ss_pred CCCCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH
Confidence 9999998621 10013589999999999999999999999998876 5778999987
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhH---HHHhc-----C
Q 017901 167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDI---ELAIK-----G 236 (364)
Q Consensus 167 ~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~---~~~i~-----g 236 (364)
..+.+++|++++|.| +|.+|++++|+|+.+|++ |+++.+++++ +.++++|++++++++..++ .+.+. +
T Consensus 156 -~~~~~~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~ 233 (343)
T cd05285 156 -RRAGVRPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGK 233 (343)
T ss_pred -HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCC
Confidence 789999999999987 689999999999999997 8888766554 7778899999998776543 33332 2
Q ss_pred CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHH
Q 017901 237 KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAE 316 (364)
Q Consensus 237 ~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (364)
++|++|||+|+...+..++++++++|+++.+|.... ... .++.....+++.+.+++.. .+
T Consensus 234 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~~-------~~~~~~~~~~~~~~~~~~~--~~ 293 (343)
T cd05285 234 GPDVVIECTGAESCIQTAIYATRPGGTVVLVGMGKP-----------EVT-------LPLSAASLREIDIRGVFRY--AN 293 (343)
T ss_pred CCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-----------CCc-------cCHHHHhhCCcEEEEeccC--hH
Confidence 399999999986588899999999999999985411 000 0111344566677666532 36
Q ss_pred HHHHHHHHHHcCCce--eccceeeccccHHHHHHHHhcCC-CCCeEEE
Q 017901 317 GLEEIRRLSETGKLK--IPVDKTFHMTQVREAHEAKDKRL-IPGKVVL 361 (364)
Q Consensus 317 ~~~~~~~~~~~g~i~--~~~~~~~~l~~~~eA~~~~~~~~-~~gkvvi 361 (364)
.++.+++++.++.+. +.+.+.|+++++++|++.+.+++ ..+|++|
T Consensus 294 ~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 294 TYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred HHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 788899999999875 34678899999999999998875 4589987
No 95
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=4.3e-35 Score=268.69 Aligned_cols=308 Identities=31% Similarity=0.467 Sum_probs=253.4
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
||++++.+++.++.+++. +.+.|.+.+++|+||+.++++|++|+....|..+. ...+|.++|||++|+|+++|+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vg~~~~ 77 (323)
T cd05276 1 MKAIVIKEPGGPEVLELG-EVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPP--PPGASDILGLEVAGVVVAVGPGVT 77 (323)
T ss_pred CeEEEEecCCCcccceEE-ecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCC--CCCCCCcccceeEEEEEeeCCCCC
Confidence 789999988878888888 88888889999999999999999999998875432 224578999999999999999999
Q ss_pred CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHH
Q 017901 109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG 188 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G 188 (364)
.+++||+|+++.. +|+|++|+.++.+.++++|+++++.+++.++..+.++|+++.+.+.+.++++++|+|++|.+|
T Consensus 78 ~~~~Gd~V~~~~~----~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig 153 (323)
T cd05276 78 GWKVGDRVCALLA----GGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVG 153 (323)
T ss_pred CCCCCCEEEEecC----CCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHH
Confidence 9999999998753 489999999999999999999999999999999999999987778899999999999999999
Q ss_pred HHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCC
Q 017901 189 FAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGG 262 (364)
Q Consensus 189 ~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G 262 (364)
++++++++..|++|+++.++++. +.+.++|++.+++....++...+. +++|++||++|+. .+..++++++++|
T Consensus 154 ~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~~~~~g 232 (323)
T cd05276 154 TAAIQLAKALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGD-YLARNLRALAPDG 232 (323)
T ss_pred HHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchH-HHHHHHHhhccCC
Confidence 99999999999999998876554 677888988888876655544432 2399999999987 6888999999999
Q ss_pred EEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC---------HHHHHHHHHHHHcCCceec
Q 017901 263 HYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD---------AEGLEEIRRLSETGKLKIP 333 (364)
Q Consensus 263 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~i~~~ 333 (364)
+++.+|.... . .. ......++.+++++.+...... ...+.++++++.++++.+.
T Consensus 233 ~~i~~~~~~~--------~---~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (323)
T cd05276 233 RLVLIGLLGG--------A---KA------ELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPV 295 (323)
T ss_pred EEEEEecCCC--------C---CC------CCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCC
Confidence 9999986411 0 00 0011123356777776654211 1345678888889999877
Q ss_pred cceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901 334 VDKTFHMTQVREAHEAKDKRLIPGKVVL 361 (364)
Q Consensus 334 ~~~~~~l~~~~eA~~~~~~~~~~gkvvi 361 (364)
.++.|+++++++|++.+.++...+|+++
T Consensus 296 ~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 296 IDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred cceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 8899999999999999998888888874
No 96
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=6.5e-35 Score=266.08 Aligned_cols=308 Identities=39% Similarity=0.642 Sum_probs=253.8
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|+++++..++..+.+.++ +.+.|.++++||+|++.++++|++|+..+.|..........|..+|||++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~ 79 (309)
T cd05289 1 MKAVRIHEYGGPEVLELA-DVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVT 79 (309)
T ss_pred CceEEEcccCCccceeec-ccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCC
Confidence 688999887777677888 8888889999999999999999999999888643222334588999999999999999999
Q ss_pred CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHH
Q 017901 109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG 188 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G 188 (364)
.+++||+|+++... ...|+|++|+.++.+.++++|+++++.+++.+++.+.++|+++.....+.+|++++|+|++|.+|
T Consensus 80 ~~~~G~~V~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g 158 (309)
T cd05289 80 GFKVGDEVFGMTPF-TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVG 158 (309)
T ss_pred CCCCCCEEEEccCC-CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHH
Confidence 99999999998621 11389999999999999999999999999999999999999987777799999999999889999
Q ss_pred HHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCchhHHHHHhhccCCCEEEEE
Q 017901 189 FAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267 (364)
Q Consensus 189 ~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~ 267 (364)
++++++++..|++|++++++++.+.++++|++.+++....++..... +.+|+++||+|+. ....++++++++|+++.+
T Consensus 159 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~ 237 (309)
T cd05289 159 SFAVQLAKARGARVIATASAANADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGE-TLARSLALVKPGGRLVSI 237 (309)
T ss_pred HHHHHHHHHcCCEEEEEecchhHHHHHHcCCCEEEeCCCCchhhccCCCCceEEEECCchH-HHHHHHHHHhcCcEEEEE
Confidence 99999999999999998876655777889988888766554443111 2399999999998 889999999999999999
Q ss_pred ccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCceeccceeeccccHHHHH
Q 017901 268 HGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAH 347 (364)
Q Consensus 268 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~ 347 (364)
|.... .. . ....+++.+......+....+.+++++++++.+.+.+++.|+++++++|+
T Consensus 238 g~~~~------------~~----~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 295 (309)
T cd05289 238 AGPPP------------AE----Q------AAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVDRVFPLEDAAEAH 295 (309)
T ss_pred cCCCc------------ch----h------hhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHH
Confidence 86411 00 0 12334555555544333678899999999999988888999999999999
Q ss_pred HHHhcCCCCCeEEE
Q 017901 348 EAKDKRLIPGKVVL 361 (364)
Q Consensus 348 ~~~~~~~~~gkvvi 361 (364)
+.+.++...+|+++
T Consensus 296 ~~~~~~~~~~kvv~ 309 (309)
T cd05289 296 ERLESGHARGKVVL 309 (309)
T ss_pred HHHHhCCCCCcEeC
Confidence 99998888788874
No 97
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=4.2e-35 Score=271.66 Aligned_cols=309 Identities=26% Similarity=0.324 Sum_probs=240.9
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
||+++++.+++ .+++. +.+.|.|.++|++||++++++|++|+..+.+..........|.++|+|++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~--~~~~~-~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~ 77 (341)
T cd05281 1 MKAIVKTKAGP--GAELV-EVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVT 77 (341)
T ss_pred CcceEEecCCC--ceEEE-eCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCC
Confidence 68899997665 48888 9999999999999999999999999988654210011123567899999999999999999
Q ss_pred CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901 109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA 165 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~ 165 (364)
.+++||+|++.... ....|+|++|++++.+.++++|++++.+ +++++..+.+++++
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~-~a~~~~~~~~a~~~ 156 (341)
T cd05281 78 RVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPE-IASIQEPLGNAVHT 156 (341)
T ss_pred CCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHH-HhhhhhHHHHHHHH
Confidence 99999999885210 0025899999999999999999999985 44666777888887
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCc
Q 017901 166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKF 238 (364)
Q Consensus 166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~ 238 (364)
+. ....+|++|+|.| +|.+|++++|+|+.+|+ +|+++.+++++ ..++++|++++++++..++. .+. +++
T Consensus 157 ~~--~~~~~g~~vlV~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~v 232 (341)
T cd05281 157 VL--AGDVSGKSVLITG-CGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDVV-EVKSVTDGTGV 232 (341)
T ss_pred HH--hcCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccHH-HHHHHcCCCCC
Confidence 74 4567899999987 69999999999999999 68888555544 67789999888887665554 433 249
Q ss_pred cEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHH
Q 017901 239 DAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGL 318 (364)
Q Consensus 239 D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (364)
|++|||+|+......++++|+++|+++.+|.... .. .+.. ......+++.+.+.......+.+
T Consensus 233 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~----~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 295 (341)
T cd05281 233 DVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG------------PV----DIDL-NNLVIFKGLTVQGITGRKMFETW 295 (341)
T ss_pred CEEEECCCCHHHHHHHHHHhccCCEEEEEccCCC------------Cc----cccc-chhhhccceEEEEEecCCcchhH
Confidence 9999999987688999999999999999986411 10 0000 01244566677666543334667
Q ss_pred HHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 319 EEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 319 ~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
..+++++.++.+.+ .+.+.++++++++||+.+.+++ .||+|+++
T Consensus 296 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 296 YQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred HHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 88999999999863 4678899999999999999988 89999864
No 98
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.6e-35 Score=272.62 Aligned_cols=304 Identities=22% Similarity=0.250 Sum_probs=241.1
Q ss_pred eeeEEecccCCCceEEEcccccCCCC-CCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDL-KPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~-~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 107 (364)
||+++++.+ +.+++. +.|.|.| .++||+||+.++++|++|+..+.|..+. ..|.++|||++|+|+++|+++
T Consensus 1 m~~~~~~~~---~~~~~~-~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~----~~~~~~g~e~~G~V~~vG~~v 72 (345)
T cd08287 1 MRATVIHGP---GDIRVE-EVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT----RAPAPIGHEFVGVVEEVGSEV 72 (345)
T ss_pred CceeEEecC---CceeEE-eCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC----CCCcccccceEEEEEEeCCCC
Confidence 689999843 358899 9999986 8999999999999999999998886432 357899999999999999999
Q ss_pred CCCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCC--ccccCCCCCChhhhc-----cccc
Q 017901 108 RSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSED--ELTPKPVSVTHADAS-----AIPF 157 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~--~~~~ip~~~~~~~aa-----~~~~ 157 (364)
..+++||+|++.... ...+|+|++|+.++.+ .++++|+++++..+. ++..
T Consensus 73 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~ 152 (345)
T cd08287 73 TSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSD 152 (345)
T ss_pred CccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhc
Confidence 999999999872110 0134899999999975 899999999872211 2235
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc
Q 017901 158 AALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK 235 (364)
Q Consensus 158 ~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~ 235 (364)
.+.+||+++ ..+.+++|++++|.| +|.+|++++|+|+..|++ ++++.+++.+ +.++++|++.++++...++.+.+.
T Consensus 153 ~~~~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~ 230 (345)
T cd08287 153 VMGTGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVR 230 (345)
T ss_pred HHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHH
Confidence 678999998 578899999999977 899999999999999996 6676666544 778899999999987766555443
Q ss_pred -----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEE
Q 017901 236 -----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIY 310 (364)
Q Consensus 236 -----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (364)
..+|+++||+|+...+..++++++++|+++.+|.... .. . +.....+.+++++.+..
T Consensus 231 ~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~------------~~----~--~~~~~~~~~~~~~~~~~ 292 (345)
T cd08287 231 ELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG------------GV----E--LDVRELFFRNVGLAGGP 292 (345)
T ss_pred HhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC------------CC----c--cCHHHHHhcceEEEEec
Confidence 1399999999986689999999999999999986510 00 0 11112356777777654
Q ss_pred eccCHHHHHHHHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 311 MRADAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 311 ~~~~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
.. ..+.+.++++++.++.+++ .+++.|+++++++|++.+.++.. .|++|+
T Consensus 293 ~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~ 344 (345)
T cd08287 293 AP-VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRA-IKVLLR 344 (345)
T ss_pred CC-cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCc-eEEEeC
Confidence 22 4678999999999999886 36789999999999999887765 499986
No 99
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=6.8e-35 Score=270.11 Aligned_cols=300 Identities=25% Similarity=0.351 Sum_probs=237.4
Q ss_pred CCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhc-cCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCEEE
Q 017901 39 GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRS-GYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVF 117 (364)
Q Consensus 39 ~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~-g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~ 117 (364)
+.++++++ +.+.|.+.++||+||+.++++|++|+..+. |..+. ....+|.++|+|++|+|+++|+++++|++||+|+
T Consensus 5 ~~~~~~~~-~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~-~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~ 82 (339)
T cd08232 5 AAGDLRVE-ERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGT-VRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVA 82 (339)
T ss_pred cCCceEEE-EcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCc-ccccCCeecCccceEEEEeeCCCCCcCCCCCEEE
Confidence 45678999 999999999999999999999999998764 32211 1224578999999999999999999999999998
Q ss_pred EecCC----------------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHh
Q 017901 118 GALHP----------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCA 169 (364)
Q Consensus 118 ~~~~~----------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~ 169 (364)
+.... ...+|+|++|+.++.+.++++|+++++.+++. ..++.+||+++...
T Consensus 83 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~ 161 (339)
T cd08232 83 VNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRA 161 (339)
T ss_pred EccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhc
Confidence 73210 01358999999999999999999999998875 56788999998665
Q ss_pred cccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc--CCccEEEECC
Q 017901 170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK--GKFDAVLDTI 245 (364)
Q Consensus 170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~--g~~D~vid~~ 245 (364)
... ++++|+|.| +|.+|++++|+|+.+|+ +++++.+++++ ++++++|++++++++..++..... +++|+++||+
T Consensus 162 ~~~-~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~vd~vld~~ 239 (339)
T cd08232 162 GDL-AGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFDVVFEAS 239 (339)
T ss_pred CCC-CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhhhccCCCccEEEECC
Confidence 555 999999987 79999999999999999 78888776554 677889999999876654322221 2399999999
Q ss_pred CCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHH
Q 017901 246 GAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLS 325 (364)
Q Consensus 246 g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (364)
|+...+...+++|+++|+++.+|.... .. . ........+++++.+... ..+.++.+++++
T Consensus 240 g~~~~~~~~~~~L~~~G~~v~~g~~~~------------~~----~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 299 (339)
T cd08232 240 GAPAALASALRVVRPGGTVVQVGMLGG------------PV----P--LPLNALVAKELDLRGSFR--FDDEFAEAVRLL 299 (339)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEecCCC------------Cc----c--CcHHHHhhcceEEEEEec--CHHHHHHHHHHH
Confidence 975588999999999999999986410 11 0 001123456677777653 356788999999
Q ss_pred HcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 326 ETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 326 ~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
+++.+++ .+.+.|+++++++|++.+.++...||+|+++
T Consensus 300 ~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 300 AAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 9998864 3778999999999999999888889999874
No 100
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=4.7e-35 Score=270.01 Aligned_cols=310 Identities=24% Similarity=0.277 Sum_probs=243.1
Q ss_pred eeeEEecccC----CCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeec
Q 017901 29 CRAVVLPRFG----GPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVG 104 (364)
Q Consensus 29 ~~a~~~~~~g----~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG 104 (364)
.++|.++..+ +++.+.++ +.+.|.+.+++|+||+.++++|++|+....+......+...+.++|+|++|+|+++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G 80 (329)
T cd05288 2 NRQVVLAKRPEGPPPPDDFELV-EVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESR 80 (329)
T ss_pred CcEEEEeccCCCCCCccceeEE-eccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecC
Confidence 4677777655 56889999 999999999999999999999998876665532111122235678999999999999
Q ss_pred CCCCCCCCCCEEEEecCCCCCCCcceeEEeecC-CccccCCCCCC--hhhhcc-ccchHHHHHHHHHHhcccCCCCEEEE
Q 017901 105 ASVRSLTVGQEVFGALHPTAVRGTYADYAVLSE-DELTPKPVSVT--HADASA-IPFAALTAWRALKCAARMSEGQRLLV 180 (364)
Q Consensus 105 ~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~-~~~~~ip~~~~--~~~aa~-~~~~~~ta~~~l~~~~~~~~g~~vli 180 (364)
++ ++++||+|+.+ ++|++|+.++. +.++++|++++ +.+++. +++++.|||+++.....+.++++++|
T Consensus 81 ~~--~~~~Gd~V~~~-------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI 151 (329)
T cd05288 81 SP--DFKVGDLVSGF-------LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVV 151 (329)
T ss_pred CC--CCCCCCEEecc-------cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEE
Confidence 65 79999999986 57999999999 99999999985 445555 88899999999877788999999999
Q ss_pred EcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHH-cCCceeeeCCChhHHHHhc----CCccEEEECCCCchhHHHH
Q 017901 181 LGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLA-AGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLG 254 (364)
Q Consensus 181 ~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~-~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~ 254 (364)
+|++|.+|++++++|+..|++|+++++++++ +.+++ +|+++++++.+.++...+. +++|++|||+|+. .+..+
T Consensus 152 ~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d~vi~~~g~~-~~~~~ 230 (329)
T cd05288 152 SAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGIDVYFDNVGGE-ILDAA 230 (329)
T ss_pred ecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCceEEEEcchHH-HHHHH
Confidence 9999999999999999999999999876654 66777 9999899887665554433 2399999999986 89999
Q ss_pred HhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC----HHHHHHHHHHHHcCCc
Q 017901 255 LNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD----AEGLEEIRRLSETGKL 330 (364)
Q Consensus 255 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~i 330 (364)
+++++++|+++.+|.... ........ .........+++++.++..... .+.+.++++++.++.+
T Consensus 231 ~~~l~~~G~~v~~g~~~~-----------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 298 (329)
T cd05288 231 LTLLNKGGRIALCGAISQ-----------YNATEPPG-PKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKL 298 (329)
T ss_pred HHhcCCCceEEEEeeccC-----------cccccccc-cccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCc
Confidence 999999999999986411 00000000 0001123456777777664322 2467888999999999
Q ss_pred eeccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901 331 KIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361 (364)
Q Consensus 331 ~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi 361 (364)
++.....++++++++|++.+.+++..||+++
T Consensus 299 ~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 299 KYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred cccccccccHHHHHHHHHHHhcCCCccceeC
Confidence 8766667999999999999998888888874
No 101
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=1.2e-34 Score=266.18 Aligned_cols=313 Identities=32% Similarity=0.443 Sum_probs=254.9
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
||++++..++.+..+.+. +.+.|.+.+++|+|++.++++|++|+....|..+. ....|+++|||++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~ 77 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLG-DLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG--LPPLPYVPGSDGAGVVEAVGEGVD 77 (325)
T ss_pred CceEEEcccCCcccceee-ecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC--CCCCCeecccceEEEEEeeCCCCC
Confidence 688888877777778898 99999999999999999999999999988875432 225688999999999999999999
Q ss_pred CCCCCCEEEEecCCC-CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchH
Q 017901 109 SLTVGQEVFGALHPT-AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV 187 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~ 187 (364)
+|++||+|+...... ...|+|++|+.++.+.++++|+++++.+++.+++++.+||+++...+.+.+|++++|+|+++.+
T Consensus 78 ~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~ 157 (325)
T cd08253 78 GLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAV 157 (325)
T ss_pred CCCCCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchH
Confidence 999999999986211 1258999999999999999999999999999999999999998777899999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCC
Q 017901 188 GFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRG 261 (364)
Q Consensus 188 G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~ 261 (364)
|++++++++..|++|+++++++++ +.+.++|++++++....++...+. +++|+++||+|+. .....+++++++
T Consensus 158 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~ 236 (325)
T cd08253 158 GHAAVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANV-NLAKDLDVLAPG 236 (325)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchH-HHHHHHHhhCCC
Confidence 999999999999999999876654 777889998888876655544432 2399999999997 788899999999
Q ss_pred CEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-C----HHHHHHHHHHHHcCCceeccce
Q 017901 262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-D----AEGLEEIRRLSETGKLKIPVDK 336 (364)
Q Consensus 262 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~g~i~~~~~~ 336 (364)
|+++.+|.... .. . .....+..++.++.+..... . .+.++.+.+++.++.+++..++
T Consensus 237 g~~v~~~~~~~------------~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 298 (325)
T cd08253 237 GRIVVYGSGGL------------RG----T--IPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPVIAR 298 (325)
T ss_pred CEEEEEeecCC------------cC----C--CChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCcccc
Confidence 99999986410 00 0 00001234555665544321 1 2355666778888888877888
Q ss_pred eeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 337 TFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 337 ~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
.|++++++++++.+.++...||+++++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 299 EYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred EEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 999999999999999988889999864
No 102
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=1.2e-34 Score=266.66 Aligned_cols=311 Identities=23% Similarity=0.277 Sum_probs=245.6
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||++++++|+++.++++ +.|.|.|+++||+|++.++++|++|+..+.|..+. ...+|.++|||++|+|++ ++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~--~~~~ 75 (324)
T cd08288 1 FKALVLEKDDGGTSAELR-ELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGI--VRTFPLVPGIDLAGTVVE--SSSP 75 (324)
T ss_pred CeeEEEeccCCCcceEEE-ECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccc--cCCCCCccccceEEEEEe--CCCC
Confidence 789999998887789999 99999999999999999999999999988885421 123577899999999998 6777
Q ss_pred CCCCCCEEEEecCC--CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHH--HhcccC-CCCEEEEEcC
Q 017901 109 SLTVGQEVFGALHP--TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALK--CAARMS-EGQRLLVLGG 183 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~--~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~--~~~~~~-~g~~vli~g~ 183 (364)
++++||+|+++... ....|+|++|+.++.+.++++|+++++++++.++..+++|+.++. +..... ++++++|+|+
T Consensus 76 ~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga 155 (324)
T cd08288 76 RFKPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGA 155 (324)
T ss_pred CCCCCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECC
Confidence 89999999986410 012589999999999999999999999999999999999987653 123445 6789999998
Q ss_pred CchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHH-HHh-cCCccEEEECCCCchhHHHHHhhccC
Q 017901 184 GGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIE-LAI-KGKFDAVLDTIGAPETERLGLNFLKR 260 (364)
Q Consensus 184 ~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~-~~i-~g~~D~vid~~g~~~~~~~~~~~l~~ 260 (364)
+|.+|++++|+|+.+|++|++++.++++ +.++++|+++++++++.+.. ..+ .+++|.+||++|+. .+..++..++.
T Consensus 156 ~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~ 234 (324)
T cd08288 156 AGGVGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELSEPGRPLQKERWAGAVDTVGGH-TLANVLAQTRY 234 (324)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhHhhhhhccCcccEEEECCcHH-HHHHHHHHhcC
Confidence 8999999999999999999998765554 77899999999887653321 111 12388999999986 77788899999
Q ss_pred CCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-----CHHHHHHHHHHHHcCCceeccc
Q 017901 261 GGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-----DAEGLEEIRRLSETGKLKIPVD 335 (364)
Q Consensus 261 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~g~i~~~~~ 335 (364)
+|+++.+|.... .+.. .....+..+++++.+..... ..+.+..+.+++.++.+.+ +.
T Consensus 235 ~g~~~~~G~~~~-----------~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~ 296 (324)
T cd08288 235 GGAVAACGLAGG-----------ADLP------TTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA-LT 296 (324)
T ss_pred CCEEEEEEecCC-----------CCCC------cchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc-cc
Confidence 999999986410 0110 01112336677877764311 1345677778888888876 57
Q ss_pred eeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 336 KTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 336 ~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
+.|+++++++|++.+.+++..+|+++++
T Consensus 297 ~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 297 REIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred eeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 8999999999999999999999999874
No 103
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=7.7e-35 Score=268.61 Aligned_cols=302 Identities=26% Similarity=0.281 Sum_probs=245.5
Q ss_pred eeeEEecccCCC--ceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901 29 CRAVVLPRFGGP--EVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS 106 (364)
Q Consensus 29 ~~a~~~~~~g~~--~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 106 (364)
|+++++.+++.+ ..+++. +.+.|.+.++||+||+.++++|++|+..+.|..+. ...|.++|||++|+|+++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~ 76 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLT-EVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP---PKLPLIPGHEIVGRVEAVGPG 76 (329)
T ss_pred CeEEEEecCCCCCCCCceEE-eccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC---CCCCccccccccEEEEEECCC
Confidence 688999877742 357787 88888899999999999999999999999886532 245889999999999999999
Q ss_pred CCCCCCCCEEEEecC------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHH
Q 017901 107 VRSLTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTA 162 (364)
Q Consensus 107 ~~~~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta 162 (364)
++++++||+|..... ....+|+|++|+.++.+.++++|+++++.+++.+++++.||
T Consensus 77 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta 156 (329)
T cd08298 77 VTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIG 156 (329)
T ss_pred CCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHH
Confidence 999999999986310 00135899999999999999999999999999999999999
Q ss_pred HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEE
Q 017901 163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAV 241 (364)
Q Consensus 163 ~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~v 241 (364)
|+++ +.++++++++++|+| +|.+|++++++++..|++|+++++++++ +.++++|++.+++.+... -.+ +|++
T Consensus 157 ~~~~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~-vD~v 229 (329)
T cd08298 157 YRAL-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDLP----PEP-LDAA 229 (329)
T ss_pred HHHH-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCccC----CCc-ccEE
Confidence 9998 889999999999997 7999999999999999999999776654 778899998877765321 124 9999
Q ss_pred EECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHH
Q 017901 242 LDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEI 321 (364)
Q Consensus 242 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (364)
+++.+....+..++++++++|+++.+|.... ... . +++ .....+..+.+.... ..+.+..+
T Consensus 230 i~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~~----~--~~~-~~~~~~~~i~~~~~~-~~~~~~~~ 290 (329)
T cd08298 230 IIFAPVGALVPAALRAVKKGGRVVLAGIHMS-----------DIP----A--FDY-ELLWGEKTIRSVANL-TRQDGEEF 290 (329)
T ss_pred EEcCCcHHHHHHHHHHhhcCCEEEEEcCCCC-----------CCC----c--cch-hhhhCceEEEEecCC-CHHHHHHH
Confidence 9997766689999999999999998874310 000 0 011 113345556555432 46778899
Q ss_pred HHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901 322 RRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361 (364)
Q Consensus 322 ~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi 361 (364)
+++++++.+++. ++.|+++++++|++.+.+++..||+|+
T Consensus 291 ~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 291 LKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred HHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 999999988874 689999999999999999999899874
No 104
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.2e-34 Score=267.50 Aligned_cols=321 Identities=29% Similarity=0.448 Sum_probs=249.1
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
.|++.+.+.+.+..+++. +.+.|.|.+++|+|++.++++|++|+..+.|..+.. ..+|.++|||++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~~g~e~~G~v~~vG~~v~ 77 (331)
T cd08273 1 NREVVVTRRGGPEVLKVV-EADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQ--PPLPFTPGYDLVGRVDALGSGVT 77 (331)
T ss_pred CeeEEEccCCCcccEEEe-ccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCC--CCCCcccccceEEEEEEeCCCCc
Confidence 378999998888889999 999999999999999999999999999988865322 24688999999999999999999
Q ss_pred CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHH
Q 017901 109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG 188 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G 188 (364)
.|++||+|.++.. .|+|++|+.++.+.++++|+++++.+++.++.++.+||+++.+.+.+.+|++++|+|++|.+|
T Consensus 78 ~~~~Gd~V~~~~~----~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig 153 (331)
T cd08273 78 GFEVGDRVAALTR----VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVG 153 (331)
T ss_pred cCCCCCEEEEeCC----CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHH
Confidence 9999999999853 389999999999999999999999999999999999999987778899999999999889999
Q ss_pred HHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHH-hc-CCccEEEECCCCchhHHHHHhhccCCCEEEE
Q 017901 189 FAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA-IK-GKFDAVLDTIGAPETERLGLNFLKRGGHYMT 266 (364)
Q Consensus 189 ~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~-i~-g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~ 266 (364)
++++++|+..|++|+++++.++.+.++++|+.. ++....++... .. +.+|+++||+|+. .+..++++++++|+++.
T Consensus 154 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~ 231 (331)
T cd08273 154 QALLELALLAGAEVYGTASERNHAALRELGATP-IDYRTKDWLPAMLTPGGVDVVFDGVGGE-SYEESYAALAPGGTLVC 231 (331)
T ss_pred HHHHHHHHHcCCEEEEEeCHHHHHHHHHcCCeE-EcCCCcchhhhhccCCCceEEEECCchH-HHHHHHHHhcCCCEEEE
Confidence 999999999999999998733347778888753 44443333321 22 2399999999998 68899999999999999
Q ss_pred EccCchhhhhccccccccchhhH-HHHHHhhhhhhccceeEEEEEec------cCHHHHHHHHHHHHcCCceeccceeec
Q 017901 267 LHGETAALADHYGLALGLPIATT-VLLKKRMQTWYSYGIDYSYIYMR------ADAEGLEEIRRLSETGKLKIPVDKTFH 339 (364)
Q Consensus 267 ~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~g~i~~~~~~~~~ 339 (364)
+|.......... ...+..+. ............++..+.+.... ...+.+..++++++++.+.+.+.+.|+
T Consensus 232 ~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 308 (331)
T cd08273 232 YGGNSSLLQGRR---SLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLP 308 (331)
T ss_pred EccCCCCCCccc---cccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCcceEEc
Confidence 986521000000 00000000 00000000112223333332221 013578889999999999888888999
Q ss_pred cccHHHHHHHHhcCCCCCeEEE
Q 017901 340 MTQVREAHEAKDKRLIPGKVVL 361 (364)
Q Consensus 340 l~~~~eA~~~~~~~~~~gkvvi 361 (364)
++++++|++.+.++...||+|+
T Consensus 309 ~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 309 LSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHHHHHHHHHHcCCCcceEEe
Confidence 9999999999998888899886
No 105
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=2e-34 Score=269.36 Aligned_cols=309 Identities=21% Similarity=0.263 Sum_probs=236.3
Q ss_pred cceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCC
Q 017901 27 TSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGAS 106 (364)
Q Consensus 27 ~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 106 (364)
..|+++++. +++.++++ +.+.|.+.++||+||+.++++|++|++.+.+.........+|+++|||++|+|+++|++
T Consensus 16 ~~~~~~~~~---~~~~l~~~-~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~ 91 (364)
T PLN02702 16 EENMAAWLV---GVNTLKIQ-PFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSE 91 (364)
T ss_pred cccceEEEe---cCCceEEE-eccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCC
Confidence 344555555 33558888 88888899999999999999999999988763221112235789999999999999999
Q ss_pred CCCCCCCCEEEEecCC------------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHH
Q 017901 107 VRSLTVGQEVFGALHP------------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTA 162 (364)
Q Consensus 107 ~~~~~~Gd~V~~~~~~------------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta 162 (364)
++.|++||+|++.... ....|+|++|+.++.+.++++|+++++.+++.. .+..++
T Consensus 92 v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a 170 (364)
T PLN02702 92 VKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVG 170 (364)
T ss_pred CCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHH
Confidence 9999999999873210 012589999999999999999999999988753 234468
Q ss_pred HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCC--ChhHHHHh----
Q 017901 163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYS--SKDIELAI---- 234 (364)
Q Consensus 163 ~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~--~~~~~~~i---- 234 (364)
|+++ ...++.+|++++|+| +|.+|++++++|+.+|++ ++++.+++.+ +.++++|+++++++. ..++.+.+
T Consensus 171 ~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 248 (364)
T PLN02702 171 VHAC-RRANIGPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQ 248 (364)
T ss_pred HHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHh
Confidence 8887 678899999999997 799999999999999996 5555544443 778899998877643 23333322
Q ss_pred ---cCCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEe
Q 017901 235 ---KGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYM 311 (364)
Q Consensus 235 ---~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (364)
.+++|++|||+|+...+..++++++++|+++.+|... + ... ........+++++.+++.
T Consensus 249 ~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-----------~-~~~------~~~~~~~~~~~~i~~~~~ 310 (364)
T PLN02702 249 KAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGH-----------N-EMT------VPLTPAAAREVDVVGVFR 310 (364)
T ss_pred hhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCC-----------C-CCc------ccHHHHHhCccEEEEecc
Confidence 1249999999997658999999999999999998641 0 110 011134566778877664
Q ss_pred ccCHHHHHHHHHHHHcCCce--eccceeecc--ccHHHHHHHHhcCCCCCeEEEE
Q 017901 312 RADAEGLEEIRRLSETGKLK--IPVDKTFHM--TQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 312 ~~~~~~~~~~~~~~~~g~i~--~~~~~~~~l--~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
. ...+..++++++++.+. +.+++.|++ +++++|++.+.+++..+|+|+.
T Consensus 311 ~--~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 311 Y--RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred C--hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 2 45788899999999886 346778655 7999999999988888899985
No 106
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=2.3e-34 Score=263.52 Aligned_cols=307 Identities=30% Similarity=0.443 Sum_probs=250.6
Q ss_pred eeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCC
Q 017901 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS 109 (364)
Q Consensus 30 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 109 (364)
+|+.+..++.+..+.+. +.+.|.+.++||+|++.++++|++|+....+..+. .+|.++|||++|+|+.+|+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~----~~~~~~g~e~~G~v~~~g~~~~~ 75 (320)
T cd05286 1 KAVRIHKTGGPEVLEYE-DVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL----PLPFVLGVEGAGVVEAVGPGVTG 75 (320)
T ss_pred CeEEEecCCCccceEEe-ecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC----CCCccCCcceeEEEEEECCCCCC
Confidence 46777777777778888 77777889999999999999999999998885432 45778999999999999999999
Q ss_pred CCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHH
Q 017901 110 LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGF 189 (364)
Q Consensus 110 ~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~ 189 (364)
+++||+|+++. ..|+|++|+.++.+.++++|++++..+++.++...+++|+++.+...+.+|++++|+|++|.+|+
T Consensus 76 ~~~G~~V~~~~----~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~ 151 (320)
T cd05286 76 FKVGDRVAYAG----PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGL 151 (320)
T ss_pred CCCCCEEEEec----CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHH
Confidence 99999999985 13899999999999999999999999999999999999999877889999999999999999999
Q ss_pred HHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCE
Q 017901 190 AAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGH 263 (364)
Q Consensus 190 ~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~ 263 (364)
+++++++.+|++|+++++++++ +.++++|++++++....++.+.+. ..+|+++||+|+. ....++++++++|+
T Consensus 152 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~g~ 230 (320)
T cd05286 152 LLTQWAKALGATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKD-TFEGSLDSLRPRGT 230 (320)
T ss_pred HHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHHhhccCcE
Confidence 9999999999999999876654 777889998888876655544443 1399999999986 88999999999999
Q ss_pred EEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEec---cC----HHHHHHHHHHHHcCCceeccce
Q 017901 264 YMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR---AD----AEGLEEIRRLSETGKLKIPVDK 336 (364)
Q Consensus 264 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~g~i~~~~~~ 336 (364)
++.+|.... ... .+. ...+..+++++.+.... .. .+.+..+++++.++.+.+..++
T Consensus 231 ~v~~g~~~~------------~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 293 (320)
T cd05286 231 LVSFGNASG------------PVP---PFD--LLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIGK 293 (320)
T ss_pred EEEEecCCC------------CCC---ccC--HHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcccc
Confidence 999986411 000 000 00122556666543321 11 2345678889999998877888
Q ss_pred eeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 337 TFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 337 ~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
.|+++++++|++.+.++...+|+++++
T Consensus 294 ~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 294 RYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred eEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 999999999999999988889999864
No 107
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=1.2e-34 Score=268.53 Aligned_cols=303 Identities=25% Similarity=0.321 Sum_probs=235.0
Q ss_pred ccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCE
Q 017901 36 RFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQE 115 (364)
Q Consensus 36 ~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~ 115 (364)
.++.+ ++++ +.|.|.|.++||+|++.++++|++|+..+.+.........+|.++|+|++|+|+++|+++++|++||+
T Consensus 6 ~~~~~--~~l~-~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 82 (340)
T TIGR00692 6 KPGYG--AELT-EVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDY 82 (340)
T ss_pred cCCCC--cEEE-ECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCE
Confidence 34444 7888 99999999999999999999999999987553111112245778999999999999999999999999
Q ss_pred EEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhccc
Q 017901 116 VFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARM 172 (364)
Q Consensus 116 V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~ 172 (364)
|++.... ....|+|++|++++.+.++++|++++..++ +++..+.+|++++ ....
T Consensus 83 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~ 159 (340)
T TIGR00692 83 VSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGP 159 (340)
T ss_pred EEECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccC
Confidence 9884211 003589999999999999999999998644 5677788999876 3457
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECC
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTI 245 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~ 245 (364)
.+|++++|.| +|.+|++++|+|+.+|++ |+++.+++++ +.++++|++.++++...++.+.+. .++|++|||+
T Consensus 160 ~~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~ 238 (340)
T TIGR00692 160 ISGKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMS 238 (340)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECC
Confidence 8999999977 799999999999999997 7777555544 677889998888877666655442 2399999999
Q ss_pred CCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHH
Q 017901 246 GAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLS 325 (364)
Q Consensus 246 g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (364)
|+...+..++++++++|+++.+|.... ..+. .+. ..+..+++.+.+.......+.+.++++++
T Consensus 239 g~~~~~~~~~~~l~~~g~~v~~g~~~~----------~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 301 (340)
T TIGR00692 239 GAPKALEQGLQAVTPGGRVSLLGLPPG----------KVTI-DFT------NKVIFKGLTIYGITGRHMFETWYTVSRLI 301 (340)
T ss_pred CCHHHHHHHHHhhcCCCEEEEEccCCC----------Cccc-chh------hhhhhcceEEEEEecCCchhhHHHHHHHH
Confidence 976688999999999999999986410 0000 010 12344566666655332345678899999
Q ss_pred HcCCce--eccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 326 ETGKLK--IPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 326 ~~g~i~--~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
++++++ +.+.+.|++++++++++.+.+++. ||+|+++
T Consensus 302 ~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 302 QSGKLDLDPIITHKFKFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred HcCCCChHHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 999987 457889999999999999988875 9999875
No 108
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.6e-34 Score=267.02 Aligned_cols=303 Identities=24% Similarity=0.340 Sum_probs=243.7
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||+++.+++ .+++. +.+.|++.++||+||++++++|+.|+....|..+. .+|.++|+|++|+|+++|++++
T Consensus 1 ~~a~~~~~~~---~~~~~-~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~----~~p~~~g~~~~G~v~~vG~~v~ 72 (334)
T cd08234 1 MKALVYEGPG---ELEVE-EVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA----APPLVPGHEFAGVVVAVGSKVT 72 (334)
T ss_pred CeeEEecCCC---ceEEE-eccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC----CCCcccccceEEEEEEeCCCCC
Confidence 6899998655 58888 99999999999999999999999999999886532 3678999999999999999999
Q ss_pred CCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901 109 SLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA 165 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~ 165 (364)
.+++||+|++.... ....|+|++|+.++.+.++++|+++++.+++.+ ..+.+++++
T Consensus 73 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~ 151 (334)
T cd08234 73 GFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHG 151 (334)
T ss_pred CCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHH
Confidence 99999999872110 013589999999999999999999999988766 677899999
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHHH--hc-CCccE
Q 017901 166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIELA--IK-GKFDA 240 (364)
Q Consensus 166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~--i~-g~~D~ 240 (364)
+ ..+++++|++++|+| +|.+|.+++++|+..|++ |+++.+++++ +.++++|++.++++...+.... .. +++|+
T Consensus 152 l-~~~~~~~g~~vlI~g-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~ 229 (334)
T cd08234 152 L-DLLGIKPGDSVLVFG-AGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDV 229 (334)
T ss_pred H-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcE
Confidence 8 788999999999997 699999999999999997 7777666554 7778899988888765543322 11 23999
Q ss_pred EEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHH
Q 017901 241 VLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEE 320 (364)
Q Consensus 241 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (364)
+|||+|+...+..++++++++|+++.+|.... .... .........+++++.+... ....+++
T Consensus 230 v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~----------~~~~------~~~~~~~~~~~~~~~~~~~--~~~~~~~ 291 (334)
T cd08234 230 VIEATGVPKTLEQAIEYARRGGTVLVFGVYAP----------DARV------SISPFEIFQKELTIIGSFI--NPYTFPR 291 (334)
T ss_pred EEECCCChHHHHHHHHHHhcCCEEEEEecCCC----------CCCc------ccCHHHHHhCCcEEEEecc--CHHHHHH
Confidence 99999876688899999999999999986511 0000 0011122346677777654 3567889
Q ss_pred HHHHHHcCCcee--ccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901 321 IRRLSETGKLKI--PVDKTFHMTQVREAHEAKDKRLIPGKVVL 361 (364)
Q Consensus 321 ~~~~~~~g~i~~--~~~~~~~l~~~~eA~~~~~~~~~~gkvvi 361 (364)
++++++++++++ .+++.|+++++++|++.+.+ ...+|+|+
T Consensus 292 ~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 292 AIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 999999999875 36788999999999999998 77789986
No 109
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=1.8e-34 Score=271.31 Aligned_cols=310 Identities=20% Similarity=0.264 Sum_probs=237.5
Q ss_pred ccceeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCcc----ccCCCCCcccccceeEEEE
Q 017901 26 TTSCRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRS----IFEPLLPLILGRDISGEVA 101 (364)
Q Consensus 26 ~~~~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~----~~~~~~p~~~G~e~~G~V~ 101 (364)
-+.+...++.. . .++++ +.|.|.++++||+|++.++++|++|++.+.+.... .....+|.++|||++|+|+
T Consensus 26 ~~~~~~~~~~~--~--~~~~~-~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~ 100 (384)
T cd08265 26 LTNLGSKVWRY--P--ELRVE-DVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVE 100 (384)
T ss_pred hccceeEEEeC--C--CEEEE-ECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEE
Confidence 34455556662 1 38999 99999999999999999999999999988632100 0113567899999999999
Q ss_pred eecCCCCCCCCCCEEEEecCC-----------------------CCCCCcceeEEeecCCccccCCCCC-------Chhh
Q 017901 102 AVGASVRSLTVGQEVFGALHP-----------------------TAVRGTYADYAVLSEDELTPKPVSV-------THAD 151 (364)
Q Consensus 102 ~vG~~~~~~~~Gd~V~~~~~~-----------------------~~~~g~~~~~~~~~~~~~~~ip~~~-------~~~~ 151 (364)
++|++++.|++||+|++.... ...+|+|++|+.++.+.++++|+++ +..
T Consensus 101 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~- 179 (384)
T cd08265 101 KTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE- 179 (384)
T ss_pred EECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-
Confidence 999999999999999862110 0126899999999999999999864 444
Q ss_pred hccccchHHHHHHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcCCceeeeCCCh
Q 017901 152 ASAIPFAALTAWRALKCA-ARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAGAEQAVDYSSK 228 (364)
Q Consensus 152 aa~~~~~~~ta~~~l~~~-~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g~~~v~~~~~~ 228 (364)
+++++.++++||+++... +.+++|++|+|+| +|.+|++++++|+..|+ +|+++.+++++ +.++++|+++++++...
T Consensus 180 ~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~ 258 (384)
T cd08265 180 AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKM 258 (384)
T ss_pred HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEccccc
Confidence 666777888999998655 6899999999996 79999999999999999 78888766554 77899999988887632
Q ss_pred ---hHHHHhc----C-CccEEEECCCCc-hhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhh
Q 017901 229 ---DIELAIK----G-KFDAVLDTIGAP-ETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTW 299 (364)
Q Consensus 229 ---~~~~~i~----g-~~D~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (364)
++.+.+. + .+|+|+||+|+. ..+..++++|+++|+++.+|.... .. .+.....
T Consensus 259 ~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~------------~~------~~~~~~~ 320 (384)
T cd08265 259 RDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT------------TV------PLHLEVL 320 (384)
T ss_pred ccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC------------CC------cccHHHH
Confidence 4444443 1 399999999973 367899999999999999985411 00 0011134
Q ss_pred hccceeEEEEEeccCHHHHHHHHHHHHcCCceec--cceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901 300 YSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIP--VDKTFHMTQVREAHEAKDKRLIPGKVVL 361 (364)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~--~~~~~~l~~~~eA~~~~~~~~~~gkvvi 361 (364)
..+..++.+.+.......+.+++++++++.+++. +++.|+++++++|++.+.++ ..+|+|+
T Consensus 321 ~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 321 QVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred hhCceEEEEeeccCCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 4455667766543234578899999999999863 67889999999999997665 5688885
No 110
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.9e-34 Score=261.91 Aligned_cols=313 Identities=31% Similarity=0.421 Sum_probs=251.0
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|||+++.+++....++++ +.|.|.+.+++|+|++.++++|++|+....+....+ ..|.++|||++|+|+.+|++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~---~~~~~~g~e~~G~v~~~G~~~~ 76 (325)
T cd08271 1 MKAWVLPKPGAALQLTLE-EIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW---SYPHVPGVDGAGVVVAVGAKVT 76 (325)
T ss_pred CeeEEEccCCCcceeEEe-ccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC---CCCcccccceEEEEEEeCCCCC
Confidence 789999977753479999 999999999999999999999999999887754221 2367899999999999999999
Q ss_pred CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHH
Q 017901 109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG 188 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G 188 (364)
.+++||+|.++.... ..|+|++|+.++.+.++++|++++..+++.+.+.+.+||+++.+.+.+.+|++++|+|+++.+|
T Consensus 77 ~~~~Gd~V~~~~~~~-~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig 155 (325)
T cd08271 77 GWKVGDRVAYHASLA-RGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVG 155 (325)
T ss_pred cCCCCCEEEeccCCC-CCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHH
Confidence 999999999985211 2489999999999999999999999999999999999999998888999999999999889999
Q ss_pred HHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCE
Q 017901 189 FAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGH 263 (364)
Q Consensus 189 ~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~ 263 (364)
++++++++..|++|++++++++.+.+.++|++.+++....++...+. ..+|++++|+++. ....++++++++|+
T Consensus 156 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~G~ 234 (325)
T cd08271 156 SFAVQLAKRAGLRVITTCSKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFNGH 234 (325)
T ss_pred HHHHHHHHHcCCEEEEEEcHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccCCE
Confidence 99999999999999988754445777889998888876655444333 1399999999997 66789999999999
Q ss_pred EEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc-------CHHHHHHHHHHHHcCCceeccce
Q 017901 264 YMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-------DAEGLEEIRRLSETGKLKIPVDK 336 (364)
Q Consensus 264 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~i~~~~~~ 336 (364)
++.++.... .... .. .......+++.+...+... ..+.+.++++++.++.+.+..++
T Consensus 235 ~v~~~~~~~----------~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 298 (325)
T cd08271 235 LVCIQGRPD----------ASPD---PP---FTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIE 298 (325)
T ss_pred EEEEcCCCC----------Ccch---hH---HhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccce
Confidence 999975411 0000 01 0112333444444432211 12456778899999999887778
Q ss_pred eeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 337 TFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 337 ~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
.|+++++.+|++.+.++...+|+++++
T Consensus 299 ~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 299 VLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred EEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 999999999999999888889999864
No 111
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=2.1e-34 Score=263.57 Aligned_cols=294 Identities=25% Similarity=0.327 Sum_probs=235.3
Q ss_pred CceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhh-ccCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCEEEE
Q 017901 40 PEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMR-SGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFG 118 (364)
Q Consensus 40 ~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~-~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~ 118 (364)
++.++++ +++.|++.++||+|++.++++|++|+..+ .|..... ...+|.++|+|++|+|+++|++++++++||+|++
T Consensus 4 ~~~~~~~-~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~-~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 81 (312)
T cd08269 4 PGRFEVE-EHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFV-YPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG 81 (312)
T ss_pred CCeeEEE-ECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcc-cCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence 4568999 99999999999999999999999999987 6643211 1235789999999999999999999999999999
Q ss_pred ecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHc
Q 017901 119 ALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS 198 (364)
Q Consensus 119 ~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~ 198 (364)
+.. |+|++|+.++.+.++++|+++ ..++....++.++++++. ..+++++++++|+| +|.+|++++++|+..
T Consensus 82 ~~~-----g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~la~~~ 152 (312)
T cd08269 82 LSG-----GAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIG-AGFIGLLFLQLAAAA 152 (312)
T ss_pred ecC-----CcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHc
Confidence 865 899999999999999999998 222222367789999985 78899999999997 799999999999999
Q ss_pred CCe-EEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCc
Q 017901 199 GCH-VSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGET 271 (364)
Q Consensus 199 g~~-vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~ 271 (364)
|++ |+++.+.+++ +++.++|++++++.+..++.+.+. .++|+++||+|+......++++++++|+++.+|...
T Consensus 153 g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~ 232 (312)
T cd08269 153 GARRVIAIDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQ 232 (312)
T ss_pred CCcEEEEECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCC
Confidence 998 8888776654 778899998888876655555443 139999999987668899999999999999998641
Q ss_pred hhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc---CHHHHHHHHHHHHcCCcee--ccceeeccccHHHH
Q 017901 272 AALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA---DAEGLEEIRRLSETGKLKI--PVDKTFHMTQVREA 346 (364)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~i~~--~~~~~~~l~~~~eA 346 (364)
. .+. .........+++.+.++.... ..+.++.++++++++.+.+ .+.+.|+++++++|
T Consensus 233 ~-----------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a 295 (312)
T cd08269 233 D-----------GPR------PVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDA 295 (312)
T ss_pred C-----------CCc------ccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHH
Confidence 0 011 011113455666666665321 2468899999999999986 36788999999999
Q ss_pred HHHHhcCCC-CCeEEE
Q 017901 347 HEAKDKRLI-PGKVVL 361 (364)
Q Consensus 347 ~~~~~~~~~-~gkvvi 361 (364)
++.+.+++. .+|+++
T Consensus 296 ~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 296 FEAARRRPDGFIKGVI 311 (312)
T ss_pred HHHHHhCCCCceEEEe
Confidence 999998865 478886
No 112
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=3.7e-34 Score=264.18 Aligned_cols=305 Identities=29% Similarity=0.340 Sum_probs=247.3
Q ss_pred eeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCC
Q 017901 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS 109 (364)
Q Consensus 30 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 109 (364)
|++++.+.|+ .+.++ +.|.|.+.+++|+|++.++++|++|+..+.|..+ ...+|.++|||++|+|+++|+++++
T Consensus 1 ~~~~~~~~~~--~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~v~~~g~~~~~ 74 (330)
T cd08245 1 KAAVVHAAGG--PLEPE-EVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWG---GSKYPLVPGHEIVGEVVEVGAGVEG 74 (330)
T ss_pred CeEEEecCCC--CceEE-eccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCC---CCCCCcccCccceEEEEEECCCCcc
Confidence 5788887765 48888 9999999999999999999999999999988642 2246789999999999999999999
Q ss_pred CCCCCEEEEecC------------------------CCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHH
Q 017901 110 LTVGQEVFGALH------------------------PTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRA 165 (364)
Q Consensus 110 ~~~Gd~V~~~~~------------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~ 165 (364)
|++||+|+.... .....|+|++|+.++.+.++++|+++++.+++.+++.+.+||++
T Consensus 75 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~ 154 (330)
T cd08245 75 RKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSA 154 (330)
T ss_pred cccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHH
Confidence 999999985310 00135899999999999999999999999999999999999999
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEEC
Q 017901 166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDT 244 (364)
Q Consensus 166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~ 244 (364)
+. ...+.++++++|+| +|.+|++++++|+.+|++|+++.+++++ +.++++|++.+++....+......+.+|++|||
T Consensus 155 l~-~~~~~~~~~vlI~g-~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~ 232 (330)
T cd08245 155 LR-DAGPRPGERVAVLG-IGGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVT 232 (330)
T ss_pred HH-hhCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHhccCCCCEEEEC
Confidence 85 47899999999997 6779999999999999999999877665 777889988888765543332222239999999
Q ss_pred CCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHH
Q 017901 245 IGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRL 324 (364)
Q Consensus 245 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (364)
+++......++++++++|+++.+|.... ... . .....+..++.++.+.... ....++.++++
T Consensus 233 ~~~~~~~~~~~~~l~~~G~~i~~~~~~~------------~~~---~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l 294 (330)
T cd08245 233 VVSGAAAEAALGGLRRGGRIVLVGLPES------------PPF---S--PDIFPLIMKRQSIAGSTHG-GRADLQEALDF 294 (330)
T ss_pred CCcHHHHHHHHHhcccCCEEEEECCCCC------------Ccc---c--cchHHHHhCCCEEEEeccC-CHHHHHHHHHH
Confidence 8876688999999999999999986411 000 0 0011244567777776643 46788889999
Q ss_pred HHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901 325 SETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361 (364)
Q Consensus 325 ~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi 361 (364)
+.++.+.+ ..+.|+++++++||+.+.+++..+|+|+
T Consensus 295 l~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 295 AAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 99999876 5578999999999999999999899875
No 113
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=1.1e-33 Score=259.83 Aligned_cols=310 Identities=28% Similarity=0.426 Sum_probs=254.2
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
|+++.+...+.+..+++. +.+.|.+++++++|++.++++|++|+....+..+. +..+|.++|||++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~vg~~~~ 77 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLV-EVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPP--PPGASDILGLEVAGEVVAVGEGVS 77 (325)
T ss_pred CceEEEccCCCcccceEE-eCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCCCCccceeEEEEEEeCCCCC
Confidence 678888877777778887 77777789999999999999999999988775432 124578999999999999999999
Q ss_pred CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHH
Q 017901 109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVG 188 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G 188 (364)
++++||+|+++.. +|+|++|+.++.+.++++|+++++.+++.++.++.++|+++.+...+.++++++|+|++|.+|
T Consensus 78 ~~~~Gd~V~~~~~----~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g 153 (325)
T TIGR02824 78 RWKVGDRVCALVA----GGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIG 153 (325)
T ss_pred CCCCCCEEEEccC----CCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHH
Confidence 9999999999743 489999999999999999999999999999999999999987888999999999999999999
Q ss_pred HHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCC
Q 017901 189 FAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGG 262 (364)
Q Consensus 189 ~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G 262 (364)
++++++++..|++|+++.++++. +.++++|++.+++....++.+.+. +++|+++||+|+. ....++++++++|
T Consensus 154 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~g 232 (325)
T TIGR02824 154 TTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGS-YLNRNIKALALDG 232 (325)
T ss_pred HHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchH-HHHHHHHhhccCc
Confidence 99999999999999998876654 667888988888776655554443 2399999999987 8889999999999
Q ss_pred EEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC---------HHHHHHHHHHHHcCCceec
Q 017901 263 HYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD---------AEGLEEIRRLSETGKLKIP 333 (364)
Q Consensus 263 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~i~~~ 333 (364)
+++.+|.... . .. ..+...++.+++++.+...... ...+..++++++++.+.+.
T Consensus 233 ~~v~~g~~~~-----~------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 295 (325)
T TIGR02824 233 RIVQIGFQGG-----R------KA------ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPV 295 (325)
T ss_pred EEEEEecCCC-----C------cC------CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCc
Confidence 9999986411 0 00 0111123467888877664210 2345667888899998877
Q ss_pred cceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 334 VDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 334 ~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
.++.|++++++++++.+.++...+|+++++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 296 IDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred cccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 888999999999999999888889999874
No 114
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.2e-33 Score=259.12 Aligned_cols=313 Identities=36% Similarity=0.569 Sum_probs=240.2
Q ss_pred EecccCCCceE--EEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCC
Q 017901 33 VLPRFGGPEVL--EVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSL 110 (364)
Q Consensus 33 ~~~~~g~~~~~--~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 110 (364)
+++..++++++ ++. +.+.|.+.++||+|+++++++|++|+..+.|..+.......|..+|||++|+|+++|+++.++
T Consensus 2 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~ 80 (319)
T cd08267 2 VYTRYGSPEVLLLLEV-EVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRF 80 (319)
T ss_pred eeCCCCChhhhhhccc-cCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCC
Confidence 34556676665 788 889999999999999999999999999988754321122446789999999999999999999
Q ss_pred CCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHH
Q 017901 111 TVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFA 190 (364)
Q Consensus 111 ~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~ 190 (364)
++||+|+..... ...|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++.....+++|++++|+|++|.+|++
T Consensus 81 ~~Gd~V~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~ 159 (319)
T cd08267 81 KVGDEVFGRLPP-KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTF 159 (319)
T ss_pred CCCCEEEEeccC-CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHH
Confidence 999999987521 1248999999999999999999999999999999999999999777779999999999988999999
Q ss_pred HHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc--CCccEEEECCCCc-hhHHHHHhhccCCCEEEEE
Q 017901 191 AVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK--GKFDAVLDTIGAP-ETERLGLNFLKRGGHYMTL 267 (364)
Q Consensus 191 ~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~--g~~D~vid~~g~~-~~~~~~~~~l~~~G~~v~~ 267 (364)
++++|+..|++|++++++++.+.++++|++++++....++..... +.+|+++||+|+. ......+..++++|+++.+
T Consensus 160 ~~~la~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~ 239 (319)
T cd08267 160 AVQIAKALGAHVTGVCSTRNAELVRSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSV 239 (319)
T ss_pred HHHHHHHcCCEEEEEeCHHHHHHHHHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEe
Confidence 999999999999998876445778899998888766544421111 2399999999953 2333444459999999999
Q ss_pred ccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCceeccceeeccccHHHHH
Q 017901 268 HGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAH 347 (364)
Q Consensus 268 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~ 347 (364)
|..... ...... ... .......+...... .....+.+.++++++.++.+.+.+++.|+++++++|+
T Consensus 240 g~~~~~----------~~~~~~-~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~ 305 (319)
T cd08267 240 GGGPSG----------LLLVLL-LLP-LTLGGGGRRLKFFL--AKPNAEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAY 305 (319)
T ss_pred cccccc----------cccccc-ccc-hhhccccceEEEEE--ecCCHHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHH
Confidence 865110 000000 000 00011122222222 2223778999999999999988888999999999999
Q ss_pred HHHhcCCCCCeEEE
Q 017901 348 EAKDKRLIPGKVVL 361 (364)
Q Consensus 348 ~~~~~~~~~gkvvi 361 (364)
+.+.++...+|+++
T Consensus 306 ~~~~~~~~~~~vvv 319 (319)
T cd08267 306 RRLKSGRARGKVVI 319 (319)
T ss_pred HHHhcCCCCCcEeC
Confidence 99998888888874
No 115
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=3.1e-33 Score=257.20 Aligned_cols=314 Identities=30% Similarity=0.416 Sum_probs=252.8
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
||++.+.+.+.++.+.+. +.+.|.+.+++++|++.++++|++|+....+..... ..+|.++|||++|+|+.+|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~ 77 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIE-ELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP--PPLPARLGYEAAGVVEAVGAGVT 77 (328)
T ss_pred CeEEEEeccCCcceeEEe-ecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC--CCCCCCCCcceEEEEEeeCCCCC
Confidence 688889877777788888 888888999999999999999999999887764332 24577899999999999999999
Q ss_pred CCCCCCEEEEecCC-CCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchH
Q 017901 109 SLTVGQEVFGALHP-TAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV 187 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~-~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~ 187 (364)
++++||+|.++... ....|+|++|+.++.+.++++|++++..+++.+++.+.++|+++.....+.++++++|+|++|.+
T Consensus 78 ~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~ 157 (328)
T cd08268 78 GFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSV 157 (328)
T ss_pred cCCCCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHH
Confidence 99999999987431 12358999999999999999999999999999999999999998778899999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----C-CccEEEECCCCchhHHHHHhhccCC
Q 017901 188 GFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----G-KFDAVLDTIGAPETERLGLNFLKRG 261 (364)
Q Consensus 188 G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g-~~D~vid~~g~~~~~~~~~~~l~~~ 261 (364)
|++++++++..|++++++++++.. +.+.++|.+.+++....++...+. + .+|++++++|+. ....++++++++
T Consensus 158 g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~ 236 (328)
T cd08268 158 GLAAIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGP-QFAKLADALAPG 236 (328)
T ss_pred HHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchH-hHHHHHHhhccC
Confidence 999999999999999999776554 667888988888776655444332 1 399999999996 888999999999
Q ss_pred CEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc---C----HHHHHHHHHHHHcCCceecc
Q 017901 262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA---D----AEGLEEIRRLSETGKLKIPV 334 (364)
Q Consensus 262 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~g~i~~~~ 334 (364)
|+++.+|.... .+. . ......+.+++.+.+..... . ...+..+.+++.++.+.+..
T Consensus 237 g~~v~~g~~~~-----------~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (328)
T cd08268 237 GTLVVYGALSG-----------EPT----P--FPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVV 299 (328)
T ss_pred CEEEEEEeCCC-----------CCC----C--CchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCc
Confidence 99999986411 000 0 00011355666666654321 1 23455566667788888777
Q ss_pred ceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 335 DKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 335 ~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
+..|++++++++++.+.+++..+|+++++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 300 DRVFPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred ccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 88999999999999999888889999864
No 116
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=5.5e-33 Score=253.47 Aligned_cols=274 Identities=23% Similarity=0.339 Sum_probs=222.9
Q ss_pred eeeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVR 108 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 108 (364)
||++++.+. .+..++++ +++.|++.+++|+|++.++++|++|+....|... +...|.++|+|++|+|+++|++++
T Consensus 1 ~~~~~~~~~-~~~~~~~~-~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~ 75 (306)
T cd08258 1 MKALVKTGP-GPGNVELR-EVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD---PVETPVVLGHEFSGTIVEVGPDVE 75 (306)
T ss_pred CeeEEEecC-CCCceEEe-ecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC---cCCCCeeeccceEEEEEEECCCcC
Confidence 578888763 34568999 9999999999999999999999999998888642 224578899999999999999999
Q ss_pred CCCCCCEEEEecCCC------------------------CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901 109 SLTVGQEVFGALHPT------------------------AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~~------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 164 (364)
.|++||+|++..... ...|+|++|+.++.+.++++|+++++.+++ ++....+||+
T Consensus 76 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~ 154 (306)
T cd08258 76 GWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVH 154 (306)
T ss_pred cCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHH
Confidence 999999999865210 124899999999999999999999999887 6677889999
Q ss_pred HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC-c-c-HHHHHHcCCceeeeCCChhHHHHhc-----C
Q 017901 165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-K-S-IDRVLAAGAEQAVDYSSKDIELAIK-----G 236 (364)
Q Consensus 165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~-~-~-~~~~~~~g~~~v~~~~~~~~~~~i~-----g 236 (364)
++...+.++++++|+|.| +|.+|++++|+|+..|++|+++..+ + + ...++++|++++ ++...++.+.+. +
T Consensus 155 ~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~ 232 (306)
T cd08258 155 AVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGD 232 (306)
T ss_pred HHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCC
Confidence 988888999999999977 7999999999999999999887432 2 2 366788999878 776666555443 2
Q ss_pred CccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHH
Q 017901 237 KFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAE 316 (364)
Q Consensus 237 ~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (364)
++|++|||+|+...+...+++|+++|+++.+|.... .+ ..+++..++.+++++.|++++ +++
T Consensus 233 ~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----------~~------~~~~~~~~~~~~~~i~g~~~~-~~~ 294 (306)
T cd08258 233 GADVVIECSGAVPALEQALELLRKGGRIVQVGIFGP-----------LA------ASIDVERIIQKELSVIGSRSS-TPA 294 (306)
T ss_pred CCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC-----------CC------cccCHHHHhhcCcEEEEEecC-chH
Confidence 399999999876688899999999999999987510 01 111222456789999999976 578
Q ss_pred HHHHHHHHHHcC
Q 017901 317 GLEEIRRLSETG 328 (364)
Q Consensus 317 ~~~~~~~~~~~g 328 (364)
+++++++++++|
T Consensus 295 ~~~~~~~~~~~~ 306 (306)
T cd08258 295 SWETALRLLASG 306 (306)
T ss_pred hHHHHHHHHhcC
Confidence 899999999875
No 117
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=1.5e-32 Score=251.86 Aligned_cols=308 Identities=32% Similarity=0.459 Sum_probs=250.3
Q ss_pred eeeEEecccCCCceEEEcccccCCCCC-CCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCC
Q 017901 29 CRAVVLPRFGGPEVLEVRPNVEVPDLK-PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASV 107 (364)
Q Consensus 29 ~~a~~~~~~g~~~~~~~~~~~~~p~~~-~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~ 107 (364)
|+|+++..++.+..+.+. +.+ |.+. +++++|++.++++|++|+..+.|.... ....|+++|||++|+|+.+|+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~ 76 (323)
T cd08241 1 MKAVVCKELGGPEDLVLE-EVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV--KPPLPFVPGSEVAGVVEAVGEGV 76 (323)
T ss_pred CeEEEEecCCCcceeEEe-cCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC--CCCCCCcccceeEEEEEEeCCCC
Confidence 688999877777778888 777 7666 499999999999999999988875421 12346789999999999999999
Q ss_pred CCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchH
Q 017901 108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV 187 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~ 187 (364)
..+++||+|+++.. .|+|++|+.++.+.++++|++++..+++.+...+.+||+++.....+.++++++|+|+.|.+
T Consensus 77 ~~~~~G~~V~~~~~----~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~ 152 (323)
T cd08241 77 TGFKVGDRVVALTG----QGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGV 152 (323)
T ss_pred CCCCCCCEEEEecC----CceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchH
Confidence 99999999999861 38999999999999999999999999988989999999998777889999999999988999
Q ss_pred HHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCC
Q 017901 188 GFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRG 261 (364)
Q Consensus 188 G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~ 261 (364)
|++++++|+..|++|+.+.++.++ +.+.++|++.+++....++.+.+. +.+|.++||+|+. .+..++++++++
T Consensus 153 g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~-~~~~~~~~~~~~ 231 (323)
T cd08241 153 GLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGD-VFEASLRSLAWG 231 (323)
T ss_pred HHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHH-HHHHHHHhhccC
Confidence 999999999999999999776554 777888988888776655544443 2399999999986 888999999999
Q ss_pred CEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc--------CHHHHHHHHHHHHcCCceec
Q 017901 262 GHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA--------DAEGLEEIRRLSETGKLKIP 333 (364)
Q Consensus 262 G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~g~i~~~ 333 (364)
|+++.+|.... ... . ........+++++.+..... ..+.+.++++++.++.+.+.
T Consensus 232 g~~v~~~~~~~------------~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (323)
T cd08241 232 GRLLVIGFASG------------EIP---Q--IPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPH 294 (323)
T ss_pred CEEEEEccCCC------------CcC---c--CCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccc
Confidence 99999986410 000 0 00002344667777665421 12567888999999999887
Q ss_pred cceeeccccHHHHHHHHhcCCCCCeEEEE
Q 017901 334 VDKTFHMTQVREAHEAKDKRLIPGKVVLE 362 (364)
Q Consensus 334 ~~~~~~l~~~~eA~~~~~~~~~~gkvvi~ 362 (364)
.++.|+++++++|++.+.++...+|++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 295 VSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred cceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 88999999999999999888888898864
No 118
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.8e-32 Score=253.39 Aligned_cols=325 Identities=29% Similarity=0.373 Sum_probs=248.4
Q ss_pred eeEEecccCCCceEEEcccccCCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCC
Q 017901 30 RAVVLPRFGGPEVLEVRPNVEVPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRS 109 (364)
Q Consensus 30 ~a~~~~~~g~~~~~~~~~~~~~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 109 (364)
|++.+...+.+..+.+. +.+.|.|.+++|+|++.++++|++|+..+.|..+. ....|.++|||++|+|+.+|+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~ 77 (337)
T cd08275 1 RAVVLTGFGGLDKLKVE-KEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS--APKPPFVPGFECAGTVEAVGEGVKD 77 (337)
T ss_pred CeEEEcCCCCccceEEE-ecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCCCCCcceeEEEEEEECCCCcC
Confidence 46677766666678888 88888899999999999999999999998875432 1245778999999999999999999
Q ss_pred CCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHH
Q 017901 110 LTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGF 189 (364)
Q Consensus 110 ~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~ 189 (364)
+++||+|+++.. .|+|++|+.++.+.++++|+++++.+++.+++...+||+++.+...+++|++++|+|++|.+|+
T Consensus 78 ~~~G~~V~~~~~----~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~ 153 (337)
T cd08275 78 FKVGDRVMGLTR----FGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGL 153 (337)
T ss_pred CCCCCEEEEecC----CCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHH
Confidence 999999999853 4899999999999999999999999999999999999999878889999999999998899999
Q ss_pred HHHHHHHHc-CCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc----CCccEEEECCCCchhHHHHHhhccCCCEE
Q 017901 190 AAVQFSVAS-GCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHY 264 (364)
Q Consensus 190 ~~~~~a~~~-g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~ 264 (364)
+++++|+.. +..++....+++.+.+.++|++.+++....++...+. +.+|+++||+|+. ....++++++++|++
T Consensus 154 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~-~~~~~~~~l~~~g~~ 232 (337)
T cd08275 154 AAGQLCKTVPNVTVVGTASASKHEALKENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDALGGE-DTRKSYDLLKPMGRL 232 (337)
T ss_pred HHHHHHHHccCcEEEEeCCHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECCcHH-HHHHHHHhhccCcEE
Confidence 999999998 3333322222244777889998888876655544433 2399999999987 788999999999999
Q ss_pred EEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----C---HHHHHHHHHHHHcCCceecccee
Q 017901 265 MTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA----D---AEGLEEIRRLSETGKLKIPVDKT 337 (364)
Q Consensus 265 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~g~i~~~~~~~ 337 (364)
+.+|................+. +.............+++++.++.... . ...+.++++++.++.+.+..++.
T Consensus 233 v~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (337)
T cd08275 233 VVYGAANLVTGEKRSWFKLAKK-WWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPKIDSV 311 (337)
T ss_pred EEEeecCCcCcccccccccccc-cccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCceeeE
Confidence 9998652100000000000000 00000111113456677777765421 1 23467788899999988878889
Q ss_pred eccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 338 FHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 338 ~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
|++++++++++.+.++...+|+++++
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 312 FPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred EcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 99999999999999888889999874
No 119
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=6.4e-33 Score=252.32 Aligned_cols=288 Identities=28% Similarity=0.394 Sum_probs=232.2
Q ss_pred CCCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCEEEEecCCCCCCCcce
Q 017901 51 VPDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYA 130 (364)
Q Consensus 51 ~p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~ 130 (364)
.|.+.+++|+|++.++++|++|+....+.++. ...+|.++|+|++|+|+++|++++++++||+|+++... ..|+|+
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~--~~g~~~ 77 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPT--MPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE--SMGGHA 77 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCC--CCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC--CCccee
Confidence 46789999999999999999999999886532 22568899999999999999999999999999987531 358999
Q ss_pred eEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901 131 DYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS 210 (364)
Q Consensus 131 ~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~ 210 (364)
+|+.++.+.++++|+++++.+++.++..+.+||+++ +...+++|++++|+++++.+|++++++++.+|++|+++++.++
T Consensus 78 ~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~ 156 (303)
T cd08251 78 TLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDD 156 (303)
T ss_pred eEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHH
Confidence 999999999999999999999999999999999998 5789999999999999999999999999999999999977665
Q ss_pred H-HHHHHcCCceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhcccccccc
Q 017901 211 I-DRVLAAGAEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGL 284 (364)
Q Consensus 211 ~-~~~~~~g~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 284 (364)
+ +.++++|++.+++....++...+. ..+|+++|++++. ....++++++++|+++.+|.... ....
T Consensus 157 ~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~~--------~~~~ 227 (303)
T cd08251 157 KLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGE-AIQKGLNCLAPGGRYVEIAMTAL--------KSAP 227 (303)
T ss_pred HHHHHHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHH-HHHHHHHHhccCcEEEEEeccCC--------CccC
Confidence 4 777889999898877665555443 2399999999876 88899999999999999985411 0000
Q ss_pred chhhHHHHHHhhhhhhccceeEEEEEe-----c-c--CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCC
Q 017901 285 PIATTVLLKKRMQTWYSYGIDYSYIYM-----R-A--DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIP 356 (364)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~--~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~ 356 (364)
.. .. ..+.+++.+..... . + ..+.+.++++++.++.+++..++.|++++++++++.+.+++..
T Consensus 228 ~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (303)
T cd08251 228 SV----DL-----SVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENI 298 (303)
T ss_pred cc----Ch-----hHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCc
Confidence 00 00 01122222222211 1 0 1345777889999999988788999999999999999998888
Q ss_pred CeEEE
Q 017901 357 GKVVL 361 (364)
Q Consensus 357 gkvvi 361 (364)
+|+++
T Consensus 299 ~~iv~ 303 (303)
T cd08251 299 GKVVV 303 (303)
T ss_pred ceEeC
Confidence 88874
No 120
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=100.00 E-value=6e-31 Score=237.58 Aligned_cols=277 Identities=26% Similarity=0.289 Sum_probs=226.5
Q ss_pred CeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeec
Q 017901 57 NEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLS 136 (364)
Q Consensus 57 ~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~ 136 (364)
+||+||+.++++|++|++...|..+ .+|.++|||++|+|+++|++++.+++||+|++... |+|++|+.++
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~-----~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~-----g~~~~~~~~~ 70 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP-----GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAP-----GAFATHVRVD 70 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC-----CCCCccceeeeEEEEeecCCccCCCCCCEEEEEec-----CcccceEEec
Confidence 5899999999999999999988531 35778999999999999999999999999999865 8999999999
Q ss_pred CCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH
Q 017901 137 EDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL 215 (364)
Q Consensus 137 ~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~ 215 (364)
.+.++++|+++++.+++.+++++.++|+++.+...+++|++++|+|+.|.+|++++++|+.+|++++++++++++ +.+.
T Consensus 71 ~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 150 (293)
T cd05195 71 ARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR 150 (293)
T ss_pred hhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 999999999999999999999999999998777899999999999989999999999999999999999877654 6777
Q ss_pred HcC--CceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhh
Q 017901 216 AAG--AEQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIAT 288 (364)
Q Consensus 216 ~~g--~~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 288 (364)
+++ ++.+++....++.+.+. ..+|+++||+|+. .+..++++++++|+++.+|.... .. ...
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~-----~~----~~~-- 218 (293)
T cd05195 151 ELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGE-LLRASWRCLAPFGRFVEIGKRDI-----LS----NSK-- 218 (293)
T ss_pred HhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcccCceEEEeecccc-----cc----CCc--
Confidence 787 67788776655554443 1399999999998 89999999999999999986511 00 000
Q ss_pred HHHHHHhhhhhhccceeEEEEEec------c--CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEE
Q 017901 289 TVLLKKRMQTWYSYGIDYSYIYMR------A--DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVV 360 (364)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvv 360 (364)
. . . ..+.+++.+...... . ..+.+..+++++.++.+.+..+..|+++++++|++.+.+++..+|++
T Consensus 219 ~-~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~iv 292 (293)
T cd05195 219 L-G--M---RPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVV 292 (293)
T ss_pred c-c--h---hhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceec
Confidence 0 0 0 112234444443321 0 13467788999999999888888999999999999999888888887
Q ss_pred E
Q 017901 361 L 361 (364)
Q Consensus 361 i 361 (364)
+
T Consensus 293 v 293 (293)
T cd05195 293 L 293 (293)
T ss_pred C
Confidence 4
No 121
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1.4e-31 Score=241.08 Aligned_cols=233 Identities=25% Similarity=0.330 Sum_probs=185.1
Q ss_pred ccccceeEEEEeecCCCC------CCCCCCEEEEecCCC------------------------------CCCCcceeEEe
Q 017901 91 ILGRDISGEVAAVGASVR------SLTVGQEVFGALHPT------------------------------AVRGTYADYAV 134 (364)
Q Consensus 91 ~~G~e~~G~V~~vG~~~~------~~~~Gd~V~~~~~~~------------------------------~~~g~~~~~~~ 134 (364)
++|||++|+|+++|++++ +|++||||....... ..+|+|+||++
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 479999999999999998 899999997643200 03699999999
Q ss_pred ecCC-ccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-
Q 017901 135 LSED-ELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI- 211 (364)
Q Consensus 135 ~~~~-~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~- 211 (364)
++.+ .++++|+++++++++.+++.+.|+|+++. .....+|++|+|+| +|++|++++|+|+.+|++ |+++.+++++
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G-~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVG-AGMLGLTAAAAAAAAGAARVVAADPSPDRR 158 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 9997 69999999999999999999999999984 45667999999998 699999999999999996 8887655544
Q ss_pred HHHHHcCCceeeeCCCh-hHHHHhc---CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchh
Q 017901 212 DRVLAAGAEQAVDYSSK-DIELAIK---GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIA 287 (364)
Q Consensus 212 ~~~~~~g~~~v~~~~~~-~~~~~i~---g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 287 (364)
+.++++|++.++++... .....+. + +|++|||+|++..+..++++++++|+++.+|.... ..+
T Consensus 159 ~~a~~~Ga~~~i~~~~~~~~~~~~~~~~g-~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~----------~~~-- 225 (280)
T TIGR03366 159 ELALSFGATALAEPEVLAERQGGLQNGRG-VDVALEFSGATAAVRACLESLDVGGTAVLAGSVFP----------GGP-- 225 (280)
T ss_pred HHHHHcCCcEecCchhhHHHHHHHhCCCC-CCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCC----------CCc--
Confidence 88899999988876542 1111121 4 99999999988789999999999999999996410 001
Q ss_pred hHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcC--Cce--eccceeeccccH
Q 017901 288 TTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETG--KLK--IPVDKTFHMTQV 343 (364)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~i~--~~~~~~~~l~~~ 343 (364)
.+++...+..+++++.+++.. +.++++++++++.++ ++. ++++++|+|+|+
T Consensus 226 ----~~i~~~~~~~~~~~i~g~~~~-~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 226 ----VALDPEQVVRRWLTIRGVHNY-EPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred ----eeeCHHHHHhCCcEEEecCCC-CHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 112223567789999998754 567899999999974 444 468999999874
No 122
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.98 E-value=1.6e-30 Score=234.49 Aligned_cols=272 Identities=26% Similarity=0.359 Sum_probs=221.1
Q ss_pred EEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCcc
Q 017901 61 VRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDEL 140 (364)
Q Consensus 61 V~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~ 140 (364)
||+.++++|++|++...|.++ .|.++|||++|+|+++|++++.|++||+|++... |+|++|+.++.+.+
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~------~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-----g~~~~~~~~~~~~~ 70 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP------GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAP-----GSFATYVRTDARLV 70 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC------CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcC-----CceeeEEEccHHHe
Confidence 789999999999999988532 3678999999999999999999999999999865 89999999999999
Q ss_pred ccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCC
Q 017901 141 TPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGA 219 (364)
Q Consensus 141 ~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~ 219 (364)
+++|+++++.+++.+++.+.++|+++.+...+.+|++++|+|+.|.+|++++++|+..|++|+++++++++ +.++++|+
T Consensus 71 ~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~ 150 (288)
T smart00829 71 VPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGI 150 (288)
T ss_pred EECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC
Confidence 99999999999999999999999998777899999999999999999999999999999999999876654 77788998
Q ss_pred --ceeeeCCChhHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHH
Q 017901 220 --EQAVDYSSKDIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLL 292 (364)
Q Consensus 220 --~~v~~~~~~~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 292 (364)
+.++++...++.+.+. .++|+++|++|+. .+..++++++++|+++.+|.... . .....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~-----~---~~~~~------ 215 (288)
T smart00829 151 PDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGE-FLDASLRCLAPGGRFVEIGKRDI-----R---DNSQL------ 215 (288)
T ss_pred ChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHhccCCcEEEEEcCcCC-----c---ccccc------
Confidence 6788776655554443 1399999999975 88899999999999999986410 0 00000
Q ss_pred HHhhhhhhccceeEEEEEec-----c--CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901 293 KKRMQTWYSYGIDYSYIYMR-----A--DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361 (364)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi 361 (364)
.. ..+.+++.+.+.... + ..+.+..+++++.++++.+...+.|++++++++++.+..++..+|+++
T Consensus 216 --~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 216 --GM-APFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred --ch-hhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 00 112344555444321 0 124567788899999888767788999999999999998887788774
No 123
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.97 E-value=5.2e-29 Score=212.49 Aligned_cols=287 Identities=20% Similarity=0.207 Sum_probs=227.6
Q ss_pred CCCCCCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccc----cceeEEEEeecCCCCCCCCCCEEEEecCCCCCCC
Q 017901 52 PDLKPNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILG----RDISGEVAAVGASVRSLTVGQEVFGALHPTAVRG 127 (364)
Q Consensus 52 p~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G----~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g 127 (364)
.++++++|+||.+|.+.+|..+..++...+... -.|+.+| ..++|+|++ +..+++++||.|.++.
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y--~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~~------- 101 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDY--APPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGIV------- 101 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccCCCcccc--cCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEec-------
Confidence 357899999999999999987776655333211 2234444 377999999 4567899999999984
Q ss_pred cceeEEeecCCc--cccCCC--CCChhhh-ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeE
Q 017901 128 TYADYAVLSEDE--LTPKPV--SVTHADA-SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHV 202 (364)
Q Consensus 128 ~~~~~~~~~~~~--~~~ip~--~~~~~~a-a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~v 202 (364)
+|.+|.+++... .++++. +.++.-. .++..+++|||-++.+.+..+.|++++|.||+|.+|+++.|+|+.+|++|
T Consensus 102 gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~V 181 (343)
T KOG1196|consen 102 GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGCYV 181 (343)
T ss_pred cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCCEE
Confidence 699999997753 455554 4444433 44477899999999999999999999999999999999999999999999
Q ss_pred EEeeCCccH-HH-HHHcCCceeeeCCCh-hHHHHhc-----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchhh
Q 017901 203 SATCGSKSI-DR-VLAAGAEQAVDYSSK-DIELAIK-----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAAL 274 (364)
Q Consensus 203 i~~~~~~~~-~~-~~~~g~~~v~~~~~~-~~~~~i~-----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~ 274 (364)
++++.++++ .+ ..++|.+.++||.++ +....++ | +|+.||.+|+. .++..+..|+..||++.||...
T Consensus 182 VGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~G-IDiYfeNVGG~-~lDavl~nM~~~gri~~CG~IS--- 256 (343)
T KOG1196|consen 182 VGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEG-IDIYFENVGGK-MLDAVLLNMNLHGRIAVCGMIS--- 256 (343)
T ss_pred EEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCc-ceEEEeccCcH-HHHHHHHhhhhccceEeeeeeh---
Confidence 999988886 44 577899999999988 6666665 6 99999999998 9999999999999999999652
Q ss_pred hhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc----CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHH
Q 017901 275 ADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA----DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAK 350 (364)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~ 350 (364)
.|..+...+. ..+...+.+++.+.++.... ....++.+..++++|+|...-+-.-.|+..++||.-+
T Consensus 257 --qYN~~~~~~~-------~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vgl 327 (343)
T KOG1196|consen 257 --QYNLENPEGL-------HNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGL 327 (343)
T ss_pred --hccccCCccc-------cchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHH
Confidence 2433333221 11125677888888876522 2456788899999999998766566799999999999
Q ss_pred hcCCCCCeEEEEc
Q 017901 351 DKRLIPGKVVLEF 363 (364)
Q Consensus 351 ~~~~~~gkvvi~~ 363 (364)
.+++..||.++++
T Consensus 328 f~GkNvGKqiv~v 340 (343)
T KOG1196|consen 328 FHGKNVGKQLVKV 340 (343)
T ss_pred hccCcccceEEEe
Confidence 9999999999976
No 124
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.97 E-value=5.3e-29 Score=222.89 Aligned_cols=246 Identities=33% Similarity=0.494 Sum_probs=200.6
Q ss_pred eEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCEEEEecCCC--------------
Q 017901 58 EVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPT-------------- 123 (364)
Q Consensus 58 eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~-------------- 123 (364)
||+|++.++++|++|+..+.|..+ ....+|.++|+|++|+|+++|++++.|++||+|+......
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~ 78 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYP--PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGG 78 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCC--cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCC
Confidence 689999999999999999988643 1235578999999999999999999999999999876311
Q ss_pred -----CCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHc
Q 017901 124 -----AVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS 198 (364)
Q Consensus 124 -----~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~ 198 (364)
...|+|++|+.++.+.++++|+++++.+++.++.++.+||+++.....+.++++++|+|+++ +|++++++++..
T Consensus 79 ~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~ 157 (271)
T cd05188 79 GILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAA 157 (271)
T ss_pred CEeccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHc
Confidence 13589999999999999999999999999999999999999997777779999999999766 999999999999
Q ss_pred CCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHh----cCCccEEEECCCCchhHHHHHhhccCCCEEEEEccCchh
Q 017901 199 GCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAI----KGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGETAA 273 (364)
Q Consensus 199 g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i----~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~ 273 (364)
|.+|+++.++++. +.++++|++++++....+....+ .+++|++||++|+......++++++++|+++.+|....
T Consensus 158 g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~- 236 (271)
T cd05188 158 GARVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSG- 236 (271)
T ss_pred CCeEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCC-
Confidence 9999999877554 77888998888887765555443 13499999999994488999999999999999986511
Q ss_pred hhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHH
Q 017901 274 LADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRL 324 (364)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (364)
.... . .....+.+++++.+++.. ...++++++++
T Consensus 237 ---------~~~~----~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 270 (271)
T cd05188 237 ---------GPPL----D---DLRRLLFKELTIIGSTGG-TREDFEEALDL 270 (271)
T ss_pred ---------CCCc----c---cHHHHHhcceEEEEeecC-CHHHHHHHHhh
Confidence 0000 0 011356788999988765 46677777765
No 125
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.96 E-value=1.6e-28 Score=238.75 Aligned_cols=292 Identities=23% Similarity=0.306 Sum_probs=242.4
Q ss_pred CCCceEEEcccccCC---CCCCCeEEEEEeEeecChhhhhhhccCCccc-cC---CCCCcccccceeEEEEeecCCCCCC
Q 017901 38 GGPEVLEVRPNVEVP---DLKPNEVLVRTRAVSINPLDTRMRSGYGRSI-FE---PLLPLILGRDISGEVAAVGASVRSL 110 (364)
Q Consensus 38 g~~~~~~~~~~~~~p---~~~~~eVlV~v~~~~i~~~D~~~~~g~~~~~-~~---~~~p~~~G~e~~G~V~~vG~~~~~~ 110 (364)
|+...++|. +-|.. +..++.=+.-|.|++||..|+....|+.++. .+ .....++|.|++|+ .
T Consensus 1424 GDlsSlrWi-es~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d 1492 (2376)
T KOG1202|consen 1424 GDLSSLRWI-ESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------D 1492 (2376)
T ss_pred ccccceeee-ecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------c
Confidence 556678887 66654 3456778899999999999999999986432 22 23457899999998 5
Q ss_pred CCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHH
Q 017901 111 TVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFA 190 (364)
Q Consensus 111 ~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~ 190 (364)
+-|.||+++.. .-++++.+.++.+.+|.+|+++++++|++.|+-+.|||+||..++..++|+++||++++|++|++
T Consensus 1493 ~~GrRvM~mvp----AksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQA 1568 (2376)
T KOG1202|consen 1493 ASGRRVMGMVP----AKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQA 1568 (2376)
T ss_pred CCCcEEEEeee----hhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHH
Confidence 67999999987 35889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCeEEEeeCCccH-HHHH----HcCCceeeeCCChhHHHHhc------CCccEEEECCCCchhHHHHHhhcc
Q 017901 191 AVQFSVASGCHVSATCGSKSI-DRVL----AAGAEQAVDYSSKDIELAIK------GKFDAVLDTIGAPETERLGLNFLK 259 (364)
Q Consensus 191 ~~~~a~~~g~~vi~~~~~~~~-~~~~----~~g~~~v~~~~~~~~~~~i~------g~~D~vid~~g~~~~~~~~~~~l~ 259 (364)
+|.+|.++|++||.++.++++ +++. ++...++-|+++.+|...+. | +|+|++....+ -++..++||+
T Consensus 1569 AIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrG-VdlVLNSLaeE-kLQASiRCLa 1646 (2376)
T KOG1202|consen 1569 AIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRG-VDLVLNSLAEE-KLQASIRCLA 1646 (2376)
T ss_pred HHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCC-eeeehhhhhHH-HHHHHHHHHH
Confidence 999999999999999887775 5443 34455677888888888776 5 99999999988 9999999999
Q ss_pred CCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEec----cCHHHHHHHHHHHHc----CCce
Q 017901 260 RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMR----ADAEGLEEIRRLSET----GKLK 331 (364)
Q Consensus 260 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~----g~i~ 331 (364)
-+|||..+|..+. ..+.|. .+ ..+.+|.++.|...+ .+.+.+.++..++++ |.++
T Consensus 1647 ~~GRFLEIGKfDL--------SqNspL----GM-----avfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~ 1709 (2376)
T KOG1202|consen 1647 LHGRFLEIGKFDL--------SQNSPL----GM-----AVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVR 1709 (2376)
T ss_pred hcCeeeeecceec--------ccCCcc----hh-----hhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCcee
Confidence 9999999997622 122222 11 467788898887653 245677777777765 6778
Q ss_pred eccceeeccccHHHHHHHHhcCCCCCeEEEEc
Q 017901 332 IPVDKTFHMTQVREAHEAKDKRLIPGKVVLEF 363 (364)
Q Consensus 332 ~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi~~ 363 (364)
|+.+++|+-.++++||++|.++++.||+|+++
T Consensus 1710 PL~ttvF~~~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1710 PLPTTVFHGQQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred ccccccccHHHHHHHHHHHhccCccceEEEEE
Confidence 89999999999999999999999999999975
No 126
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=3.8e-27 Score=212.01 Aligned_cols=246 Identities=26% Similarity=0.305 Sum_probs=192.7
Q ss_pred CCCCCcccccceeEEEEeecCCCCCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHH
Q 017901 85 EPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWR 164 (364)
Q Consensus 85 ~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~ 164 (364)
+.++|.++|||++|+|+++|+++++|++||+|+++ +.|++|+.++.+.++++|+++++.+++.+ .++++||+
T Consensus 17 ~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~-------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~ 88 (277)
T cd08255 17 KLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF-------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALN 88 (277)
T ss_pred cCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHH
Confidence 34678999999999999999999999999999997 45899999999999999999999998888 78999999
Q ss_pred HHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-HHHHHcC-CceeeeCCChhHHHHhcCCccEE
Q 017901 165 ALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-DRVLAAG-AEQAVDYSSKDIELAIKGKFDAV 241 (364)
Q Consensus 165 ~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~~~~~~g-~~~v~~~~~~~~~~~i~g~~D~v 241 (364)
++ ..+++++|++++|+| +|.+|++++++|+.+|++ |+++.+++++ +.++++| ++.+++...... .-.+ +|++
T Consensus 89 ~~-~~~~~~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~-~d~v 163 (277)
T cd08255 89 GV-RDAEPRLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTADEI--GGRG-ADVV 163 (277)
T ss_pred HH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccchhhh--cCCC-CCEE
Confidence 98 478999999999997 799999999999999998 9998776655 7788888 555555432111 1114 9999
Q ss_pred EECCCCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEecc--------
Q 017901 242 LDTIGAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRA-------- 313 (364)
Q Consensus 242 id~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 313 (364)
|||++....+..++++++++|+++.+|.... ... ... ..+..+.+++.+.....
T Consensus 164 l~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~-----------~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (277)
T cd08255 164 IEASGSPSALETALRLLRDRGRVVLVGWYGL-----------KPL----LLG---EEFHFKRLPIRSSQVYGIGRYDRPR 225 (277)
T ss_pred EEccCChHHHHHHHHHhcCCcEEEEEeccCC-----------Ccc----ccH---HHHHhccCeEEeecccccccccccc
Confidence 9999976688999999999999999986511 000 000 01222333444433210
Q ss_pred ---CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcC-CCCCeEEE
Q 017901 314 ---DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKR-LIPGKVVL 361 (364)
Q Consensus 314 ---~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~-~~~gkvvi 361 (364)
..+.+.++++++.++.+++.+.+.|+++++++|++.+.++ ....|+++
T Consensus 226 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 226 RWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred cccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 1256888999999999988888899999999999999877 33457653
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.76 E-value=3e-18 Score=131.48 Aligned_cols=86 Identities=37% Similarity=0.561 Sum_probs=72.2
Q ss_pred CCeEEEEEeEeecChhhhhhhccCCccccCCCCCcccccceeEEEEeecCCCCCCCCCCEEEEecCC-------------
Q 017901 56 PNEVLVRTRAVSINPLDTRMRSGYGRSIFEPLLPLILGRDISGEVAAVGASVRSLTVGQEVFGALHP------------- 122 (364)
Q Consensus 56 ~~eVlV~v~~~~i~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~------------- 122 (364)
|+||+||++++|||++|++.+.|.. ......|+++|||++|+|+++|+++++|++||+|+.....
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~--~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~ 78 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGP--PPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP 78 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSS--SSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhcc--ccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence 7999999999999999999999941 3345789999999999999999999999999999985421
Q ss_pred ----------CCCCCcceeEEeecCCccccC
Q 017901 123 ----------TAVRGTYADYAVLSEDELTPK 143 (364)
Q Consensus 123 ----------~~~~g~~~~~~~~~~~~~~~i 143 (364)
...+|+|+||+++|.++++|+
T Consensus 79 ~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 79 NLCPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GGTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred ccCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 136899999999999999885
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.63 E-value=1.7e-15 Score=120.14 Aligned_cols=124 Identities=26% Similarity=0.368 Sum_probs=103.4
Q ss_pred hHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhc----C-CccEEEECCCCchhHHHHHhhcc
Q 017901 186 AVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIK----G-KFDAVLDTIGAPETERLGLNFLK 259 (364)
Q Consensus 186 ~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~----g-~~D~vid~~g~~~~~~~~~~~l~ 259 (364)
++|++++|+|++.|++|+++++++++ +.++++|+++++++++.++.+.++ + ++|+||||+|++..++.++++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~ 80 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLLR 80 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHEE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHhc
Confidence 58999999999999999999988765 889999999999999988877776 2 49999999997779999999999
Q ss_pred CCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHc
Q 017901 260 RGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSET 327 (364)
Q Consensus 260 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (364)
++|+++.+|... +.+ ...+...++.+++++.+++.. +.++++++++++.+
T Consensus 81 ~~G~~v~vg~~~-----------~~~------~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 81 PGGRIVVVGVYG-----------GDP------ISFNLMNLMFKEITIRGSWGG-SPEDFQEALQLLAQ 130 (130)
T ss_dssp EEEEEEEESSTS-----------TSE------EEEEHHHHHHTTEEEEEESSG-GHHHHHHHHHHHH-
T ss_pred cCCEEEEEEccC-----------CCC------CCCCHHHHHhCCcEEEEEccC-CHHHHHHHHHHhcC
Confidence 999999999862 011 112223678899999999976 47889999988763
No 129
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.55 E-value=8e-15 Score=115.82 Aligned_cols=121 Identities=33% Similarity=0.564 Sum_probs=80.6
Q ss_pred cCCceeeeCCChhHHHHhcCCccEEEECCC--CchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHH
Q 017901 217 AGAEQAVDYSSKDIELAIKGKFDAVLDTIG--APETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKK 294 (364)
Q Consensus 217 ~g~~~v~~~~~~~~~~~i~g~~D~vid~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (364)
+|+++++||+..++ ..-.+ +|+||||+| ++..+..+.++| ++|++|+++.. .. ....
T Consensus 1 LGAd~vidy~~~~~-~~~~~-~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~~--------------~~----~~~~ 59 (127)
T PF13602_consen 1 LGADEVIDYRDTDF-AGPGG-VDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGGD--------------LP----SFAR 59 (127)
T ss_dssp CT-SEEEETTCSHH-HTTS--EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-SH--------------HH----HHHH
T ss_pred CCcCEEecCCCccc-cCCCC-ceEEEECCCCccHHHHHHHHHHC-CCCEEEEECCc--------------cc----chhh
Confidence 68999999997777 21224 999999999 654457888888 99999999741 00 1000
Q ss_pred hhhhhhccceeEEEEEe-cc---CHHHHHHHHHHHHcCCceeccceeeccccHHHHHHHHhcCCCCCeEEE
Q 017901 295 RMQTWYSYGIDYSYIYM-RA---DAEGLEEIRRLSETGKLKIPVDKTFHMTQVREAHEAKDKRLIPGKVVL 361 (364)
Q Consensus 295 ~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~~eA~~~~~~~~~~gkvvi 361 (364)
........+..... .+ ..+.++++.+++.+|++++.+.++|||+++++|++.+.+++..||+|+
T Consensus 60 ---~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 60 ---RLKGRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp ---HHHCHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ---hhcccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 01112222322221 11 245699999999999999999999999999999999999999999996
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.44 E-value=2e-12 Score=120.23 Aligned_cols=175 Identities=20% Similarity=0.117 Sum_probs=128.5
Q ss_pred HHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceeeeCCChhHHHHhcCCc
Q 017901 161 TAWRALKCAAR-MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKF 238 (364)
Q Consensus 161 ta~~~l~~~~~-~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~i~g~~ 238 (364)
..|.++.+..+ .-+|++|+|.| .|.+|+.+++.++.+|++|+++..++. ...+..+|++.+ + ..+.+.+ +
T Consensus 187 s~~~~i~r~t~~~l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~-----~~e~v~~-a 258 (413)
T cd00401 187 SLIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-T-----MEEAVKE-G 258 (413)
T ss_pred hhHHHHHHhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-c-----HHHHHcC-C
Confidence 34555545434 36899999999 899999999999999999998865544 477888998533 2 1234445 9
Q ss_pred cEEEECCCCchhHHHH-HhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHH
Q 017901 239 DAVLDTIGAPETERLG-LNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEG 317 (364)
Q Consensus 239 D~vid~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (364)
|+||+|+|....+... +++++++|+++.+|.. +. .++...+..+++++.+........+
T Consensus 259 DVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--------------~~------eId~~~L~~~el~i~g~~~~~~~~~ 318 (413)
T cd00401 259 DIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--------------DV------EIDVKGLKENAVEVVNIKPQVDRYE 318 (413)
T ss_pred CEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--------------CC------ccCHHHHHhhccEEEEccCCcceEE
Confidence 9999999998777765 9999999999999854 11 1122245567777777765322224
Q ss_pred HH--HHHHHHHcCCc-e--ecccee-----eccc-cHHHHHHHHhcCCCC-CeEEEEc
Q 017901 318 LE--EIRRLSETGKL-K--IPVDKT-----FHMT-QVREAHEAKDKRLIP-GKVVLEF 363 (364)
Q Consensus 318 ~~--~~~~~~~~g~i-~--~~~~~~-----~~l~-~~~eA~~~~~~~~~~-gkvvi~~ 363 (364)
+. ..+.++.+|.+ . ..+++. |+|+ |+.+++..+.++... .|+++.+
T Consensus 319 ~~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p 376 (413)
T cd00401 319 LPDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLP 376 (413)
T ss_pred cCCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECC
Confidence 45 68999999988 3 457888 9999 999999999877642 4777654
No 131
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.18 E-value=1.2e-09 Score=104.49 Aligned_cols=143 Identities=20% Similarity=0.187 Sum_probs=100.7
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCcee-eeCCCh-------------hHH-----
Q 017901 172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQA-VDYSSK-------------DIE----- 231 (364)
Q Consensus 172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v-~~~~~~-------------~~~----- 231 (364)
..++++|+|.| +|.+|+++++.|+.+|++|+++..+++ ++.++++|++.+ ++..+. ++.
T Consensus 162 ~~pg~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 35799999999 899999999999999999999966555 488999999854 554221 211
Q ss_pred ---HHhcCCccEEEECCCCch-----h-HHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhc-
Q 017901 232 ---LAIKGKFDAVLDTIGAPE-----T-ERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYS- 301 (364)
Q Consensus 232 ---~~i~g~~D~vid~~g~~~-----~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 301 (364)
+.+++ +|++|+|+|.+. . .+.+++.+++||+++.+|...+ +.-. ...+...++.
T Consensus 241 ~~~~~~~g-aDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~G----------G~~e-----~t~~~~~v~~~ 304 (509)
T PRK09424 241 LFAEQAKE-VDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENG----------GNCE-----LTVPGEVVVTD 304 (509)
T ss_pred HHHhccCC-CCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCC----------CCcc-----cccCccceEeE
Confidence 11234 999999999742 4 4999999999999999986411 1000 0111113444
Q ss_pred cceeEEEEEeccCHHHHHHHHHHHHcCCcee
Q 017901 302 YGIDYSYIYMRADAEGLEEIRRLSETGKLKI 332 (364)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~ 332 (364)
+++++.+.+..+ .+...+..+++.++.+..
T Consensus 305 ~gVti~Gv~n~P-~~~p~~As~lla~~~i~l 334 (509)
T PRK09424 305 NGVTIIGYTDLP-SRLPTQSSQLYGTNLVNL 334 (509)
T ss_pred CCEEEEEeCCCc-hhHHHHHHHHHHhCCccH
Confidence 789998876432 233345889999888765
No 132
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.42 E-value=4.3e-06 Score=78.49 Aligned_cols=103 Identities=18% Similarity=0.138 Sum_probs=78.3
Q ss_pred HHHHHHHHHhcccC-CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCC
Q 017901 160 LTAWRALKCAARMS-EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGK 237 (364)
Q Consensus 160 ~ta~~~l~~~~~~~-~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~ 237 (364)
..+|+++.+..++. .|++++|.| .|.+|..+++.++.+|++|+++..++.+ ..+...|+. +.+ +.+.+.+
T Consensus 196 ~s~~~ai~rat~~~l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~-v~~-----l~eal~~- 267 (425)
T PRK05476 196 ESLLDGIKRATNVLIAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFR-VMT-----MEEAAEL- 267 (425)
T ss_pred hhhHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCE-ecC-----HHHHHhC-
Confidence 34566665443444 899999999 8999999999999999999998766554 445555664 322 2333445
Q ss_pred ccEEEECCCCchhHH-HHHhhccCCCEEEEEccC
Q 017901 238 FDAVLDTIGAPETER-LGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 238 ~D~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~ 270 (364)
+|+||+|+|....+. ..+..+++|+.++..|..
T Consensus 268 aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~ 301 (425)
T PRK05476 268 GDIFVTATGNKDVITAEHMEAMKDGAILANIGHF 301 (425)
T ss_pred CCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCC
Confidence 999999999876665 688999999999999875
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.27 E-value=7.9e-06 Score=78.29 Aligned_cols=95 Identities=25% Similarity=0.385 Sum_probs=73.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCcee-eeCCC-------------hh--------H
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQA-VDYSS-------------KD--------I 230 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v-~~~~~-------------~~--------~ 230 (364)
++++++|.| .|.+|++++++++.+|++|+++..+.+ ++.++++|++.+ ++..+ .+ +
T Consensus 163 p~akVlViG-aG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~ 241 (511)
T TIGR00561 163 PPAKVLVIG-AGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELF 241 (511)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHHH
Confidence 568999999 899999999999999999999866654 478888998752 22211 11 2
Q ss_pred HHHhcCCccEEEECC---CCch---hHHHHHhhccCCCEEEEEccC
Q 017901 231 ELAIKGKFDAVLDTI---GAPE---TERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 231 ~~~i~g~~D~vid~~---g~~~---~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.+.+++ +|++|+|+ |.+. .....++.+++|+.+|.++..
T Consensus 242 ~e~~~~-~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d 286 (511)
T TIGR00561 242 AAQAKE-VDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAE 286 (511)
T ss_pred HHHhCC-CCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeC
Confidence 233345 99999999 6643 567889999999999999754
No 134
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.24 E-value=1.8e-05 Score=73.88 Aligned_cols=102 Identities=18% Similarity=0.127 Sum_probs=77.3
Q ss_pred HHHHHHHHhcc-cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCc
Q 017901 161 TAWRALKCAAR-MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKF 238 (364)
Q Consensus 161 ta~~~l~~~~~-~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~ 238 (364)
.++.++.+..+ ...|++|+|.| .|.+|+.+++.++.+|++|+++..+..+ ..+...|+. +.+ ..+.+.+ .
T Consensus 180 s~~~~i~r~t~~~l~Gk~VvViG-~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----leeal~~-a 251 (406)
T TIGR00936 180 STIDGILRATNLLIAGKTVVVAG-YGWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFR-VMT-----MEEAAKI-G 251 (406)
T ss_pred hHHHHHHHhcCCCCCcCEEEEEC-CCHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCE-eCC-----HHHHHhc-C
Confidence 45555544433 46899999999 8999999999999999999998655443 555666763 322 2234445 8
Q ss_pred cEEEECCCCchhHH-HHHhhccCCCEEEEEccC
Q 017901 239 DAVLDTIGAPETER-LGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 239 D~vid~~g~~~~~~-~~~~~l~~~G~~v~~g~~ 270 (364)
|++|+++|....+. ..+..+++++.++.+|..
T Consensus 252 DVVItaTG~~~vI~~~~~~~mK~GailiN~G~~ 284 (406)
T TIGR00936 252 DIFITATGNKDVIRGEHFENMKDGAIVANIGHF 284 (406)
T ss_pred CEEEECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence 99999999986676 488999999999999865
No 135
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.13 E-value=3.2e-05 Score=69.27 Aligned_cols=167 Identities=16% Similarity=0.192 Sum_probs=94.9
Q ss_pred cccCCCCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-HHHHH----cCCceeeeCCChhHHHH-h-cCCccE
Q 017901 170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-DRVLA----AGAEQAVDYSSKDIELA-I-KGKFDA 240 (364)
Q Consensus 170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-~~~~~----~g~~~v~~~~~~~~~~~-i-~g~~D~ 240 (364)
+.+++|++||..| +|. |..+.++++..|. +|+++..++.. +.+++ .+.+.+- ....++.+. . .+.+|+
T Consensus 73 ~~~~~g~~VLDiG-~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~d~~~l~~~~~~fD~ 149 (272)
T PRK11873 73 AELKPGETVLDLG-SGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLGEIEALPVADNSVDV 149 (272)
T ss_pred ccCCCCCEEEEeC-CCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEcchhhCCCCCCceeE
Confidence 5688999999999 666 8888888888775 69999776654 44443 4443221 111122110 1 134999
Q ss_pred EEECC------CCchhHHHHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccC
Q 017901 241 VLDTI------GAPETERLGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRAD 314 (364)
Q Consensus 241 vid~~------g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (364)
|+... .....+..+.+.|++||+++..+.... .+.+ .... +...+.+.... .
T Consensus 150 Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~-----------~~~~--~~~~--------~~~~~~~~~~~-~ 207 (272)
T PRK11873 150 IISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLR-----------GELP--EEIR--------NDAELYAGCVA-G 207 (272)
T ss_pred EEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeecc-----------CCCC--HHHH--------HhHHHHhcccc-C
Confidence 98643 223478999999999999998765410 0110 0110 11111111110 0
Q ss_pred HHHHHHHHHHHHcCCce---eccceeeccccHHHHHHHH--hcCCCCCeEEE
Q 017901 315 AEGLEEIRRLSETGKLK---IPVDKTFHMTQVREAHEAK--DKRLIPGKVVL 361 (364)
Q Consensus 315 ~~~~~~~~~~~~~g~i~---~~~~~~~~l~~~~eA~~~~--~~~~~~gkvvi 361 (364)
.....++.+++++..+. ....+.++++++.++++.+ ..+...++.+.
T Consensus 208 ~~~~~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 259 (272)
T PRK11873 208 ALQEEEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIV 259 (272)
T ss_pred CCCHHHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEE
Confidence 11233445555553232 3456678899999999988 55554455543
No 136
>PLN02494 adenosylhomocysteinase
Probab=98.12 E-value=3.3e-05 Score=72.85 Aligned_cols=101 Identities=18% Similarity=0.121 Sum_probs=78.0
Q ss_pred HHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCcc
Q 017901 162 AWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFD 239 (364)
Q Consensus 162 a~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D 239 (364)
.+.++.+..++ -.|++++|.| .|.+|..+++.++.+|++|+++..++.+ ..+...|+.. + ++.+.+.. .|
T Consensus 240 ~~d~i~r~t~i~LaGKtVvViG-yG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~v-v-----~leEal~~-AD 311 (477)
T PLN02494 240 LPDGLMRATDVMIAGKVAVICG-YGDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQV-L-----TLEDVVSE-AD 311 (477)
T ss_pred HHHHHHHhcCCccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCee-c-----cHHHHHhh-CC
Confidence 35555454443 6799999999 8999999999999999999998666543 5666677752 2 12334445 99
Q ss_pred EEEECCCCchhH-HHHHhhccCCCEEEEEccC
Q 017901 240 AVLDTIGAPETE-RLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 240 ~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~~ 270 (364)
++++|.|....+ ...+..|++++.++.+|..
T Consensus 312 VVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 312 IFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred EEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence 999999987554 7899999999999999974
No 137
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.07 E-value=8e-05 Score=67.32 Aligned_cols=92 Identities=20% Similarity=0.266 Sum_probs=72.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHH
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETER 252 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~ 252 (364)
.+.+++|.| .|.+|+.+++.++.+|++|+++.++.+. +.++++|+..+ .. .++.+.+.+ +|+||+|++..-...
T Consensus 151 ~g~kvlViG-~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-~~--~~l~~~l~~-aDiVI~t~p~~~i~~ 225 (296)
T PRK08306 151 HGSNVLVLG-FGRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-HL--SELAEEVGK-IDIIFNTIPALVLTK 225 (296)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-cH--HHHHHHhCC-CCEEEECCChhhhhH
Confidence 689999999 7999999999999999999999777554 66778887532 21 234455555 999999998763446
Q ss_pred HHHhhccCCCEEEEEccC
Q 017901 253 LGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 253 ~~~~~l~~~G~~v~~g~~ 270 (364)
..++.+++++.++.++..
T Consensus 226 ~~l~~~~~g~vIIDla~~ 243 (296)
T PRK08306 226 EVLSKMPPEALIIDLASK 243 (296)
T ss_pred HHHHcCCCCcEEEEEccC
Confidence 778889999999999864
No 138
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.01 E-value=0.00058 Score=61.24 Aligned_cols=164 Identities=13% Similarity=0.107 Sum_probs=105.5
Q ss_pred eEEEEeecCCCCCCCCCCEEEEecCCC-----------------------CCCCcceeEEeecCCccccCCCCCChhh-h
Q 017901 97 SGEVAAVGASVRSLTVGQEVFGALHPT-----------------------AVRGTYADYAVLSEDELTPKPVSVTHAD-A 152 (364)
Q Consensus 97 ~G~V~~vG~~~~~~~~Gd~V~~~~~~~-----------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~-a 152 (364)
-++|++ |.++++.+|.||+++.++. ...-.|.+|..+..+..+.- +.++ -
T Consensus 38 fA~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~----~~e~~~ 111 (314)
T PF11017_consen 38 FATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDP----EREDWQ 111 (314)
T ss_pred EEEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccCc----chhHHH
Confidence 367777 8889999999999987632 01122344444443332211 1111 1
Q ss_pred ccccchHHHHHHHHHHhcc---cCCCCEEEEEcCCchHHHHHHHHHH--HcCCeEEEeeCCccHHHHHHcCC-ceeeeCC
Q 017901 153 SAIPFAALTAWRALKCAAR---MSEGQRLLVLGGGGAVGFAAVQFSV--ASGCHVSATCGSKSIDRVLAAGA-EQAVDYS 226 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~---~~~g~~vli~g~~g~~G~~~~~~a~--~~g~~vi~~~~~~~~~~~~~~g~-~~v~~~~ 226 (364)
+++-.-+.|.|- |.+... .-..+.|++..|++..++.++..++ ..+.+++++++.....+.+.+|+ +.|+.|+
T Consensus 112 ~LlrPLf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N~~Fve~lg~Yd~V~~Yd 190 (314)
T PF11017_consen 112 MLLRPLFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARNVAFVESLGCYDEVLTYD 190 (314)
T ss_pred HHHHHHHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcchhhhhccCCceEEeehh
Confidence 222223456663 222221 2344678999999999999999998 33459999999999999999996 6788886
Q ss_pred ChhHHHHhcCCccEEEECCCCchhHHHHHhhccCCC-EEEEEcc
Q 017901 227 SKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGG-HYMTLHG 269 (364)
Q Consensus 227 ~~~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G-~~v~~g~ 269 (364)
+-+..+. ..--+++|..|+........+.++..= ..+.+|.
T Consensus 191 ~i~~l~~--~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~ 232 (314)
T PF11017_consen 191 DIDSLDA--PQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGA 232 (314)
T ss_pred hhhhccC--CCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEc
Confidence 5332211 236889999999877777777777653 4555554
No 139
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.90 E-value=0.00016 Score=68.49 Aligned_cols=91 Identities=19% Similarity=0.146 Sum_probs=71.1
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh
Q 017901 172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET 250 (364)
Q Consensus 172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~ 250 (364)
.-.|++++|.| .|.+|..+++.++.+|++|+++.++... ..+...|+.. . ++.+.+.. +|+|+.++|....
T Consensus 251 ~LaGKtVgVIG-~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~-~-----~leell~~-ADIVI~atGt~~i 322 (476)
T PTZ00075 251 MIAGKTVVVCG-YGDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQV-V-----TLEDVVET-ADIFVTATGNKDI 322 (476)
T ss_pred CcCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCcee-c-----cHHHHHhc-CCEEEECCCcccc
Confidence 45799999999 8999999999999999999888665444 3344456542 2 23344445 9999999998756
Q ss_pred HH-HHHhhccCCCEEEEEccC
Q 017901 251 ER-LGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 251 ~~-~~~~~l~~~G~~v~~g~~ 270 (364)
+. ..+..|++++.++.+|..
T Consensus 323 I~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 323 ITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred cCHHHHhccCCCcEEEEcCCC
Confidence 64 899999999999999865
No 140
>PRK08324 short chain dehydrogenase; Validated
Probab=97.83 E-value=0.00011 Score=74.46 Aligned_cols=133 Identities=20% Similarity=0.233 Sum_probs=85.1
Q ss_pred CcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEee
Q 017901 127 GTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC 206 (364)
Q Consensus 127 g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~ 206 (364)
.++++|..++...++++ +.++.+++..-... .....+|++++|+||+|++|..+++.+...|++|+++.
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~ 453 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLAD 453 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEe
Confidence 35567777777777777 66666655421000 11223689999999999999999999999999999998
Q ss_pred CCccH--HHHHHcCC--c---eeeeCCChh-H---HHHhc---CCccEEEECCCCc------------------------
Q 017901 207 GSKSI--DRVLAAGA--E---QAVDYSSKD-I---ELAIK---GKFDAVLDTIGAP------------------------ 248 (364)
Q Consensus 207 ~~~~~--~~~~~~g~--~---~v~~~~~~~-~---~~~i~---g~~D~vid~~g~~------------------------ 248 (364)
++... ....+++. . ...|..+.+ + .+.+. |++|++|++.|..
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~ 533 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGH 533 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence 77653 23334433 1 123444432 2 22221 4599999999831
Q ss_pred -hhHHHHHhhccC---CCEEEEEccC
Q 017901 249 -ETERLGLNFLKR---GGHYMTLHGE 270 (364)
Q Consensus 249 -~~~~~~~~~l~~---~G~~v~~g~~ 270 (364)
..++.+++.+++ +|+++.++..
T Consensus 534 ~~l~~~~~~~l~~~~~~g~iV~vsS~ 559 (681)
T PRK08324 534 FLVAREAVRIMKAQGLGGSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEECCc
Confidence 123455666665 6899998864
No 141
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.77 E-value=0.00018 Score=65.68 Aligned_cols=106 Identities=20% Similarity=0.258 Sum_probs=74.9
Q ss_pred CccccCCCCCChhhhccccchHHHHHHHHHHhccc----CCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-
Q 017901 138 DELTPKPVSVTHADASAIPFAALTAWRALKCAARM----SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI- 211 (364)
Q Consensus 138 ~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~----~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~- 211 (364)
..++++|+.+..+.++... +...++.++. .+.. .++++|+|.| +|.+|..+++.++..|+ +|+.+.++.++
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~-~a~~~~~~l~~~~V~ViG-aG~iG~~~a~~L~~~g~~~V~v~~r~~~ra 215 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVE-LAEKIFGNLKGKKVLVIG-AGEMGELAAKHLAAKGVAEITIANRTYERA 215 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHH-HHHHHhCCccCCEEEEEC-cHHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence 4578889988877666553 3446666653 3332 4789999999 79999999999998876 56666766543
Q ss_pred -HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh
Q 017901 212 -DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET 250 (364)
Q Consensus 212 -~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~ 250 (364)
+++.++|.. +++. .++.+.+.. +|+||.|++.+..
T Consensus 216 ~~la~~~g~~-~~~~--~~~~~~l~~-aDvVi~at~~~~~ 251 (311)
T cd05213 216 EELAKELGGN-AVPL--DELLELLNE-ADVVISATGAPHY 251 (311)
T ss_pred HHHHHHcCCe-EEeH--HHHHHHHhc-CCEEEECCCCCch
Confidence 667888874 3332 244555555 9999999999744
No 142
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.75 E-value=8.7e-05 Score=73.60 Aligned_cols=96 Identities=28% Similarity=0.379 Sum_probs=66.2
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc----------------------cHHHHHHcCCceeeeCCC-
Q 017901 171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK----------------------SIDRVLAAGAEQAVDYSS- 227 (364)
Q Consensus 171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~----------------------~~~~~~~~g~~~v~~~~~- 227 (364)
...+|++|+|.| +|+.|+.+++.++..|++|+++...+ +.+.++++|++..++...
T Consensus 133 ~~~~g~~V~VIG-aGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIG-GGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 367899999999 89999999999999999988875321 125578899876665432
Q ss_pred hhH-HHHhc-CCccEEEECCCCchhHHHHHhhccCCCEEEEEc
Q 017901 228 KDI-ELAIK-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 228 ~~~-~~~i~-g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g 268 (364)
.+. .+.+. + +|+||+++|........+.....+|.+..++
T Consensus 212 ~~~~~~~~~~~-~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~~ 253 (564)
T PRK12771 212 EDITLEQLEGE-FDAVFVAIGAQLGKRLPIPGEDAAGVLDAVD 253 (564)
T ss_pred CcCCHHHHHhh-CCEEEEeeCCCCCCcCCCCCCccCCcEEHHH
Confidence 221 12222 5 9999999998744444455555555554443
No 143
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.71 E-value=0.00044 Score=61.06 Aligned_cols=142 Identities=18% Similarity=0.172 Sum_probs=89.2
Q ss_pred CCCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHHHHHHHhcccCCCCEEEEEcCCchH
Q 017901 108 RSLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAV 187 (364)
Q Consensus 108 ~~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~ 187 (364)
..+++||+++..+ +|.+|.. +...++++++++.+..+.--. +. ...+.+.. .+.++++|+-.| +|.
T Consensus 65 ~p~~~g~~~~i~p-------~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~-~~l~~l~~--~~~~~~~VLDiG-cGs- 130 (250)
T PRK00517 65 HPIRIGDRLWIVP-------SWEDPPD-PDEINIELDPGMAFGTGTHPT-TR-LCLEALEK--LVLPGKTVLDVG-CGS- 130 (250)
T ss_pred CCEEEcCCEEEEC-------CCcCCCC-CCeEEEEECCCCccCCCCCHH-HH-HHHHHHHh--hcCCCCEEEEeC-CcH-
Confidence 4477898887764 3666644 677789999988877544222 21 12223321 256889999999 665
Q ss_pred HHHHHHHHHHcCC-eEEEeeCCccH-HHH----HHcCCceeeeCCChhHHHHhcCCccEEEECCCCc---hhHHHHHhhc
Q 017901 188 GFAAVQFSVASGC-HVSATCGSKSI-DRV----LAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP---ETERLGLNFL 258 (364)
Q Consensus 188 G~~~~~~a~~~g~-~vi~~~~~~~~-~~~----~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~---~~~~~~~~~l 258 (364)
|.+++.+++ .|+ +|+++..++.. +.+ ...+....+.....+ .++|+|+.+.... ..+..+.+.|
T Consensus 131 G~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~~~------~~fD~Vvani~~~~~~~l~~~~~~~L 203 (250)
T PRK00517 131 GILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQGD------LKADVIVANILANPLLELAPDLARLL 203 (250)
T ss_pred HHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEccCC------CCcCEEEEcCcHHHHHHHHHHHHHhc
Confidence 888876655 566 59999776653 333 333331111111111 1399999876654 2456788899
Q ss_pred cCCCEEEEEccC
Q 017901 259 KRGGHYMTLHGE 270 (364)
Q Consensus 259 ~~~G~~v~~g~~ 270 (364)
++||+++..|..
T Consensus 204 kpgG~lilsgi~ 215 (250)
T PRK00517 204 KPGGRLILSGIL 215 (250)
T ss_pred CCCcEEEEEECc
Confidence 999999998764
No 144
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.70 E-value=0.00025 Score=59.63 Aligned_cols=110 Identities=21% Similarity=0.282 Sum_probs=79.8
Q ss_pred ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCceeeeCCC
Q 017901 153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQAVDYSS 227 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~v~~~~~ 227 (364)
-.+.-+.+.|. + .+...+++|++||-.| .+.|+.++-+|+..| +|+.+-+.+.+ +.++.+|..+|.-...
T Consensus 53 qtis~P~~vA~-m-~~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~g 127 (209)
T COG2518 53 QTISAPHMVAR-M-LQLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHG 127 (209)
T ss_pred ceecCcHHHHH-H-HHHhCCCCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEEC
Confidence 33444455555 2 3678899999999999 347999999999988 99999887663 4477888865432211
Q ss_pred h---hHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEcc
Q 017901 228 K---DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 228 ~---~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 269 (364)
+ .+.+. +++|.|+-+.+.+..-...++.|++||++|..-+
T Consensus 128 DG~~G~~~~--aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 128 DGSKGWPEE--APYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred CcccCCCCC--CCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 1 22221 3599999988887566789999999999997765
No 145
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.60 E-value=0.00037 Score=59.68 Aligned_cols=74 Identities=23% Similarity=0.388 Sum_probs=57.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCC----ceeeeCCCh-hHHHHhc------CCccE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGA----EQAVDYSSK-DIELAIK------GKFDA 240 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~----~~v~~~~~~-~~~~~i~------g~~D~ 240 (364)
.++.++|+||++++|.++++.+...|++|+.+.|+.++ +++.+++. ...+|.++. +....+. |++|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 45789999999999999999999999999999998774 66778883 234555554 3222222 56999
Q ss_pred EEECCCC
Q 017901 241 VLDTIGA 247 (364)
Q Consensus 241 vid~~g~ 247 (364)
.+++.|-
T Consensus 85 LvNNAGl 91 (246)
T COG4221 85 LVNNAGL 91 (246)
T ss_pred EEecCCC
Confidence 9999885
No 146
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.51 E-value=0.001 Score=62.23 Aligned_cols=94 Identities=21% Similarity=0.282 Sum_probs=66.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH-HHcCCceeeeCCC-hhHHHHhcCCccEEEECCC---C-
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV-LAAGAEQAVDYSS-KDIELAIKGKFDAVLDTIG---A- 247 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~-~~~g~~~v~~~~~-~~~~~~i~g~~D~vid~~g---~- 247 (364)
+.+++|.| .|.+|+.+++.++.+|++|+++.++.++ +.+ ..++......... .++.+.+.+ +|++|+|++ .
T Consensus 167 ~~~VlViG-aG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~-aDvVI~a~~~~g~~ 244 (370)
T TIGR00518 167 PGDVTIIG-GGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKR-ADLLIGAVLIPGAK 244 (370)
T ss_pred CceEEEEc-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHcc-CCEEEEccccCCCC
Confidence 45588999 7999999999999999998888766544 433 4455432222222 345555655 999999983 3
Q ss_pred -ch-hHHHHHhhccCCCEEEEEccC
Q 017901 248 -PE-TERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 248 -~~-~~~~~~~~l~~~G~~v~~g~~ 270 (364)
+. .....++.+++++.++.++..
T Consensus 245 ~p~lit~~~l~~mk~g~vIvDva~d 269 (370)
T TIGR00518 245 APKLVSNSLVAQMKPGAVIVDVAID 269 (370)
T ss_pred CCcCcCHHHHhcCCCCCEEEEEecC
Confidence 21 136788889999999998854
No 147
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.46 E-value=0.0016 Score=58.68 Aligned_cols=92 Identities=23% Similarity=0.248 Sum_probs=68.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHH
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETER 252 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~ 252 (364)
.|++++|.| .|.+|..+++.++.+|++|++..++.++ ..+.+.|.. .+. ..++.+.+.+ +|+||+|++..-.-.
T Consensus 150 ~gk~v~IiG-~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~-~~~--~~~l~~~l~~-aDiVint~P~~ii~~ 224 (287)
T TIGR02853 150 HGSNVMVLG-FGRTGMTIARTFSALGARVFVGARSSADLARITEMGLI-PFP--LNKLEEKVAE-IDIVINTIPALVLTA 224 (287)
T ss_pred CCCEEEEEc-ChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCe-eec--HHHHHHHhcc-CCEEEECCChHHhCH
Confidence 578999999 7999999999999999999988877654 455566653 222 2234445555 999999998652224
Q ss_pred HHHhhccCCCEEEEEccC
Q 017901 253 LGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 253 ~~~~~l~~~G~~v~~g~~ 270 (364)
..++.++++..++.++..
T Consensus 225 ~~l~~~k~~aliIDlas~ 242 (287)
T TIGR02853 225 DVLSKLPKHAVIIDLASK 242 (287)
T ss_pred HHHhcCCCCeEEEEeCcC
Confidence 577888999889888754
No 148
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.36 E-value=0.00063 Score=64.87 Aligned_cols=146 Identities=18% Similarity=0.246 Sum_probs=91.5
Q ss_pred cccccceeEEEEeecCCCCCCCCCCEEEEe-cC--------C----CCCCCcceeEEeecCCccccCCCCCChhhhcccc
Q 017901 90 LILGRDISGEVAAVGASVRSLTVGQEVFGA-LH--------P----TAVRGTYADYAVLSEDELTPKPVSVTHADASAIP 156 (364)
Q Consensus 90 ~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~-~~--------~----~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~ 156 (364)
..-|+|+++-+.+|++++...-.|..-+.- .. . ...++.|++. +++|+.+..+.. ...
T Consensus 90 ~~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a--------~~~~k~v~~~t~-i~~ 160 (423)
T PRK00045 90 VHEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKA--------FSVAKRVRTETG-IGA 160 (423)
T ss_pred hcCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHH--------HHHHhhHhhhcC-CCC
Confidence 345999999999999998775556543210 00 0 0122333332 455554443322 222
Q ss_pred chHHHHHHHHHHhcc---cCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH--HHHHHcCCceeeeCCChhH
Q 017901 157 FAALTAWRALKCAAR---MSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAEQAVDYSSKDI 230 (364)
Q Consensus 157 ~~~~ta~~~l~~~~~---~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~ 230 (364)
.+..+++.++..... -.++++++|.| +|.+|.++++.++..|+ +|+.+.++.++ .++.++|.+ +++. .+.
T Consensus 161 ~~~Sv~~~Av~~a~~~~~~~~~~~vlViG-aG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~--~~~ 236 (423)
T PRK00045 161 GAVSVASAAVELAKQIFGDLSGKKVLVIG-AGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL--DEL 236 (423)
T ss_pred CCcCHHHHHHHHHHHhhCCccCCEEEEEC-chHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH--HHH
Confidence 234466666632221 25789999999 79999999999999998 67777776544 467777754 3333 344
Q ss_pred HHHhcCCccEEEECCCCch
Q 017901 231 ELAIKGKFDAVLDTIGAPE 249 (364)
Q Consensus 231 ~~~i~g~~D~vid~~g~~~ 249 (364)
.+.+.+ +|+||+|+|.+.
T Consensus 237 ~~~l~~-aDvVI~aT~s~~ 254 (423)
T PRK00045 237 PEALAE-ADIVISSTGAPH 254 (423)
T ss_pred HHHhcc-CCEEEECCCCCC
Confidence 455556 999999999863
No 149
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.31 E-value=0.00098 Score=52.85 Aligned_cols=93 Identities=20% Similarity=0.264 Sum_probs=60.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH--HHHHHcCCc--eeeeCCChhHHHHhcCCccEEEECCCC
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI--DRVLAAGAE--QAVDYSSKDIELAIKGKFDAVLDTIGA 247 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~--~~~~~~g~~--~v~~~~~~~~~~~i~g~~D~vid~~g~ 247 (364)
-.+.+++|.| +|+.|.+++..+...|++ ++.+.|+.++ +++..++.. .++.++ ++.+.+.. +|+||.|++.
T Consensus 10 l~~~~vlviG-aGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~--~~~~~~~~-~DivI~aT~~ 85 (135)
T PF01488_consen 10 LKGKRVLVIG-AGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE--DLEEALQE-ADIVINATPS 85 (135)
T ss_dssp GTTSEEEEES-SSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG--GHCHHHHT-ESEEEE-SST
T ss_pred cCCCEEEEEC-CHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH--HHHHHHhh-CCeEEEecCC
Confidence 3588999999 799999999999999996 7777887665 455666332 233333 23334445 9999999988
Q ss_pred chhHHHHHhhccCC----CEEEEEccC
Q 017901 248 PETERLGLNFLKRG----GHYMTLHGE 270 (364)
Q Consensus 248 ~~~~~~~~~~l~~~----G~~v~~g~~ 270 (364)
+.. ...-..+... +.++.++.+
T Consensus 86 ~~~-~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 86 GMP-IITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp TST-SSTHHHHTTTCHHCSEEEES-SS
T ss_pred CCc-ccCHHHHHHHHhhhhceeccccC
Confidence 622 2122233333 577877654
No 150
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.26 E-value=0.004 Score=54.30 Aligned_cols=97 Identities=22% Similarity=0.385 Sum_probs=64.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH-HHc---CCceee--eCCChh-HH---HHhc---CCcc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV-LAA---GAEQAV--DYSSKD-IE---LAIK---GKFD 239 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~-~~~---g~~~v~--~~~~~~-~~---~~i~---g~~D 239 (364)
.+++++|+|++|.+|..+++.+...|++|+.++++++. ..+ .++ +..+.+ |..+.+ .. +.+. +++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 46799999999999999999999999999999887653 222 222 222222 223221 21 1211 3489
Q ss_pred EEEECCCCch-----------------------hHHHHHhhccCCCEEEEEccC
Q 017901 240 AVLDTIGAPE-----------------------TERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 240 ~vid~~g~~~-----------------------~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.++.+.|... .++...++++++|+++.++..
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 137 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM 137 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence 9999987521 144556677788999998864
No 151
>PRK12742 oxidoreductase; Provisional
Probab=97.26 E-value=0.0037 Score=54.43 Aligned_cols=97 Identities=23% Similarity=0.366 Sum_probs=63.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC-cc-H-HHHHHcCCcee-eeCCCh-hHHHHhc--CCccEEEECCC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KS-I-DRVLAAGAEQA-VDYSSK-DIELAIK--GKFDAVLDTIG 246 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~-~~-~-~~~~~~g~~~v-~~~~~~-~~~~~i~--g~~D~vid~~g 246 (364)
.+++++|+|++|.+|..+++.+...|++|+.+.++ ++ . +...+.++..+ .|..+. .+.+.+. +++|++|++.|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag 84 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG 84 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence 46899999999999999999999999998877543 22 2 33344554422 343333 2222222 45999999987
Q ss_pred Cch---h----------------------HHHHHhhccCCCEEEEEccC
Q 017901 247 APE---T----------------------ERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 247 ~~~---~----------------------~~~~~~~l~~~G~~v~~g~~ 270 (364)
... . ...+.+.++.+|+++.++..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 133 (237)
T PRK12742 85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSV 133 (237)
T ss_pred CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecc
Confidence 520 0 13444556678999988754
No 152
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.25 E-value=0.0039 Score=55.75 Aligned_cols=72 Identities=22% Similarity=0.316 Sum_probs=51.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCcee-eeCCCh-hH---HHHhc---CCccEEEECCC
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQA-VDYSSK-DI---ELAIK---GKFDAVLDTIG 246 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v-~~~~~~-~~---~~~i~---g~~D~vid~~g 246 (364)
++++|+||+|++|..+++.+...|++|+++.++.+. +.+.+.+...+ .|..+. ++ .+.+. +++|++|++.|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag 81 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG 81 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 479999999999999999999999999999887654 44444454332 355443 22 22221 45999999998
Q ss_pred C
Q 017901 247 A 247 (364)
Q Consensus 247 ~ 247 (364)
.
T Consensus 82 ~ 82 (274)
T PRK05693 82 Y 82 (274)
T ss_pred C
Confidence 4
No 153
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.0047 Score=55.40 Aligned_cols=74 Identities=22% Similarity=0.364 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCcee-eeCCChh----HHHHh----cCCccEEEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQA-VDYSSKD----IELAI----KGKFDAVLD 243 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v-~~~~~~~----~~~~i----~g~~D~vid 243 (364)
.+++++|+||+|++|..+++.+...|++|+++.++.+. +.+.+.+...+ .|..+.+ +.+.+ .|++|++|.
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~ 82 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN 82 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence 46789999999999999999998899999999887654 44555554432 3444432 22222 145899999
Q ss_pred CCCC
Q 017901 244 TIGA 247 (364)
Q Consensus 244 ~~g~ 247 (364)
+.|.
T Consensus 83 ~Ag~ 86 (277)
T PRK05993 83 NGAY 86 (277)
T ss_pred CCCc
Confidence 9873
No 154
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.20 E-value=0.0023 Score=53.42 Aligned_cols=91 Identities=29% Similarity=0.385 Sum_probs=65.4
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCcee-eeCCCh-hHHHHhcCCccEEEECCCCc----hhH
Q 017901 178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQA-VDYSSK-DIELAIKGKFDAVLDTIGAP----ETE 251 (364)
Q Consensus 178 vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v-~~~~~~-~~~~~i~g~~D~vid~~g~~----~~~ 251 (364)
|+|.||+|.+|..+++.+...|.+|++++|++.+... ..+.+.+ .|..+. ++.+.+.+ +|+||.++|.. ...
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-~~~~~~~~~d~~d~~~~~~al~~-~d~vi~~~~~~~~~~~~~ 78 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-SPGVEIIQGDLFDPDSVKAALKG-ADAVIHAAGPPPKDVDAA 78 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-CTTEEEEESCTTCHHHHHHHHTT-SSEEEECCHSTTTHHHHH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-ccccccceeeehhhhhhhhhhhh-cchhhhhhhhhccccccc
Confidence 7899999999999999999999999999998775222 3444322 233343 45566667 99999999842 245
Q ss_pred HHHHhhccCCC--EEEEEccC
Q 017901 252 RLGLNFLKRGG--HYMTLHGE 270 (364)
Q Consensus 252 ~~~~~~l~~~G--~~v~~g~~ 270 (364)
...++.++..| +++.++..
T Consensus 79 ~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 79 KNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp HHHHHHHHHTTSSEEEEEEET
T ss_pred ccccccccccccccceeeecc
Confidence 66666665544 77877754
No 155
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.17 E-value=0.0058 Score=54.47 Aligned_cols=97 Identities=21% Similarity=0.320 Sum_probs=72.2
Q ss_pred ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901 153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL 232 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 232 (364)
...||+....+..+.+..---.|.+++|.|.+..+|.-++.++...|++|+.+.+.. .++.+
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t------------------~~l~~ 197 (286)
T PRK14175 136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS------------------KDMAS 197 (286)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc------------------hhHHH
Confidence 345777666666664332234789999999777799999999999999999875432 23444
Q ss_pred HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.++. +|+||.++|.+..+.. +.+++|..++.+|..
T Consensus 198 ~~~~-ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~ 232 (286)
T PRK14175 198 YLKD-ADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNT 232 (286)
T ss_pred HHhh-CCEEEECCCCCcccCH--HHcCCCcEEEEcCCC
Confidence 5555 9999999999855544 578999999999875
No 156
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.15 E-value=0.0045 Score=60.37 Aligned_cols=102 Identities=22% Similarity=0.229 Sum_probs=67.1
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHH--------cCC------ce-eeeCCCh-h
Q 017901 168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLA--------AGA------EQ-AVDYSSK-D 229 (364)
Q Consensus 168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~--------~g~------~~-v~~~~~~-~ 229 (364)
...+.+.|++++|.||+|.+|..+++.+...|++|+++.++.+. . .+.. .|. .. ..|..+. +
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es 152 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ 152 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence 44566789999999999999999999999999999999887654 2 2221 121 11 2244443 3
Q ss_pred HHHHhcCCccEEEECCCCch---------------hHHHHHhhccC--CCEEEEEccC
Q 017901 230 IELAIKGKFDAVLDTIGAPE---------------TERLGLNFLKR--GGHYMTLHGE 270 (364)
Q Consensus 230 ~~~~i~g~~D~vid~~g~~~---------------~~~~~~~~l~~--~G~~v~~g~~ 270 (364)
+...+.+ +|+||.|.|... ....+++.+.. .++||.++..
T Consensus 153 I~~aLgg-iDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSi 209 (576)
T PLN03209 153 IGPALGN-ASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSL 209 (576)
T ss_pred HHHHhcC-CCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccc
Confidence 4444445 999999998531 12233444433 3689988764
No 157
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.08 E-value=0.014 Score=49.50 Aligned_cols=98 Identities=22% Similarity=0.329 Sum_probs=67.3
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH-H----HHHHcC-Cce--eeeCCChhHHHHhcCC
Q 017901 168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-D----RVLAAG-AEQ--AVDYSSKDIELAIKGK 237 (364)
Q Consensus 168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~-~----~~~~~g-~~~--v~~~~~~~~~~~i~g~ 237 (364)
....+.++++++-.| +|. |..++.+++..+ .+|+++..+++. + .++.++ .+. ++..+..++.....++
T Consensus 34 ~~l~~~~~~~vlDlG-~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~ 111 (198)
T PRK00377 34 SKLRLRKGDMILDIG-CGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEK 111 (198)
T ss_pred HHcCCCCcCEEEEeC-CcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCC
Confidence 456788999999999 565 999999998764 589999776553 3 345566 332 2222333333333345
Q ss_pred ccEEEECCCC---chhHHHHHhhccCCCEEEEE
Q 017901 238 FDAVLDTIGA---PETERLGLNFLKRGGHYMTL 267 (364)
Q Consensus 238 ~D~vid~~g~---~~~~~~~~~~l~~~G~~v~~ 267 (364)
+|.||...+. ...+..+.+.|+++|+++..
T Consensus 112 ~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (198)
T PRK00377 112 FDRIFIGGGSEKLKEIISASWEIIKKGGRIVID 144 (198)
T ss_pred CCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence 9999986653 23677888999999999853
No 158
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.07 E-value=0.0022 Score=54.71 Aligned_cols=106 Identities=23% Similarity=0.316 Sum_probs=69.7
Q ss_pred hHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-----HHHHHcCCcee--eeCCCh
Q 017901 158 AALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-----DRVLAAGAEQA--VDYSSK 228 (364)
Q Consensus 158 ~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-----~~~~~~g~~~v--~~~~~~ 228 (364)
+.+.|. ++ +...+++|++||-.| ++.|+.++-+++..|. +|+++...++. +.+.+++.+.+ +..+..
T Consensus 58 P~~~a~-~l-~~L~l~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~ 133 (209)
T PF01135_consen 58 PSMVAR-ML-EALDLKPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGS 133 (209)
T ss_dssp HHHHHH-HH-HHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GG
T ss_pred HHHHHH-HH-HHHhcCCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchh
Confidence 344444 33 667799999999998 3468999999988875 68888777663 34566676543 222211
Q ss_pred -hHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEcc
Q 017901 229 -DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 229 -~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~ 269 (364)
.+.+ .+++|.|+-+.+-+..-...++.|++||++|..-.
T Consensus 134 ~g~~~--~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~pi~ 173 (209)
T PF01135_consen 134 EGWPE--EAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAPIG 173 (209)
T ss_dssp GTTGG--G-SEEEEEESSBBSS--HHHHHTEEEEEEEEEEES
T ss_pred hcccc--CCCcCEEEEeeccchHHHHHHHhcCCCcEEEEEEc
Confidence 1111 13599999998887566789999999999998543
No 159
>PRK06182 short chain dehydrogenase; Validated
Probab=97.04 E-value=0.0079 Score=53.71 Aligned_cols=74 Identities=20% Similarity=0.364 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce-eeeCCChh-HHHHhc------CCccEEEEC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ-AVDYSSKD-IELAIK------GKFDAVLDT 244 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~-v~~~~~~~-~~~~i~------g~~D~vid~ 244 (364)
.+++++|+|++|.+|..+++.+...|++|+++.++.+. ..+.+.+... ..|..+.+ +...+. +++|++|.+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ 81 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN 81 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 36789999999999999999998999999999887654 3333344432 23444432 222221 459999999
Q ss_pred CCC
Q 017901 245 IGA 247 (364)
Q Consensus 245 ~g~ 247 (364)
.|.
T Consensus 82 ag~ 84 (273)
T PRK06182 82 AGY 84 (273)
T ss_pred CCc
Confidence 984
No 160
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=97.04 E-value=0.0065 Score=54.08 Aligned_cols=96 Identities=16% Similarity=0.263 Sum_probs=71.6
Q ss_pred cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHH
Q 017901 154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA 233 (364)
Q Consensus 154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 233 (364)
..||+.......|.+..---.|++++|.|.+..+|.-++.++...|++|+.+.+ .+.++.+.
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs------------------~t~~l~~~ 198 (285)
T PRK14189 137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHS------------------KTRDLAAH 198 (285)
T ss_pred CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecC------------------CCCCHHHH
Confidence 457766666666643322347999999998888899999999999999987532 22334444
Q ss_pred hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
++. +|+|+-++|.+..+.. +++++|..++.+|..
T Consensus 199 ~~~-ADIVV~avG~~~~i~~--~~ik~gavVIDVGin 232 (285)
T PRK14189 199 TRQ-ADIVVAAVGKRNVLTA--DMVKPGATVIDVGMN 232 (285)
T ss_pred hhh-CCEEEEcCCCcCccCH--HHcCCCCEEEEcccc
Confidence 544 9999999999855443 899999999999965
No 161
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=97.03 E-value=0.0084 Score=49.28 Aligned_cols=97 Identities=19% Similarity=0.252 Sum_probs=67.7
Q ss_pred ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901 153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL 232 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 232 (364)
...|+....+...+.+...--.|.+++|.|++..+|..++..++..|++|+.+.+.. +++.+
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~------------------~~l~~ 83 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT------------------KNLKE 83 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc------------------hhHHH
Confidence 444665556666554444446789999999544579999999999999877766542 23444
Q ss_pred HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.+.. +|+||.+++.+..+. .+.++++-.++.++.+
T Consensus 84 ~l~~-aDiVIsat~~~~ii~--~~~~~~~~viIDla~p 118 (168)
T cd01080 84 HTKQ-ADIVIVAVGKPGLVK--GDMVKPGAVVIDVGIN 118 (168)
T ss_pred HHhh-CCEEEEcCCCCceec--HHHccCCeEEEEccCC
Confidence 4545 999999999974333 3457777788888765
No 162
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.01 E-value=0.0034 Score=52.26 Aligned_cols=74 Identities=18% Similarity=0.325 Sum_probs=54.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCC---ceeeeCCChh----HHHHhc---CCccEEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGA---EQAVDYSSKD----IELAIK---GKFDAVL 242 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~---~~v~~~~~~~----~~~~i~---g~~D~vi 242 (364)
-|.+|||+||++++|+..++-...+|-+||.+.|++++ +.+..... ..+.|..+.+ +.+.+. ...++++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 47899999999999999999999999999999998775 55544332 2355554443 555555 2378888
Q ss_pred ECCCC
Q 017901 243 DTIGA 247 (364)
Q Consensus 243 d~~g~ 247 (364)
+|.|-
T Consensus 84 NNAGI 88 (245)
T COG3967 84 NNAGI 88 (245)
T ss_pred ecccc
Confidence 88774
No 163
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.00 E-value=0.0032 Score=55.36 Aligned_cols=76 Identities=16% Similarity=0.243 Sum_probs=54.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcC----Cc-ee--eeCCChhHH----HHhc---C
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAG----AE-QA--VDYSSKDIE----LAIK---G 236 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g----~~-~v--~~~~~~~~~----~~i~---g 236 (364)
..+.+++|+||++++|...+..+...|.+|+.+.|++++ +++.++. .. ++ +|..+.+-. +.+. +
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 457899999999999999999999999999999999874 3333333 21 12 344443322 2222 2
Q ss_pred CccEEEECCCCc
Q 017901 237 KFDAVLDTIGAP 248 (364)
Q Consensus 237 ~~D~vid~~g~~ 248 (364)
.+|+.+++.|-.
T Consensus 84 ~IdvLVNNAG~g 95 (265)
T COG0300 84 PIDVLVNNAGFG 95 (265)
T ss_pred cccEEEECCCcC
Confidence 499999999853
No 164
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=96.98 E-value=0.0054 Score=57.58 Aligned_cols=111 Identities=18% Similarity=0.166 Sum_probs=73.0
Q ss_pred ccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHH
Q 017901 155 IPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELA 233 (364)
Q Consensus 155 ~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~ 233 (364)
+..+....+..+.+...+++|++||-.| + +.|..+..+++..|++|+++..+++. +.+++......++....++.+
T Consensus 148 L~~Aq~~k~~~l~~~l~l~~g~rVLDIG-c-G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~~~- 224 (383)
T PRK11705 148 LEEAQEAKLDLICRKLQLKPGMRVLDIG-C-GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDYRD- 224 (383)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEeC-C-CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECchhh-
Confidence 3334445566566778889999999999 4 47888899999889999999877665 555443322111111112211
Q ss_pred hcCCccEEEEC-----CCC---chhHHHHHhhccCCCEEEEEc
Q 017901 234 IKGKFDAVLDT-----IGA---PETERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 234 i~g~~D~vid~-----~g~---~~~~~~~~~~l~~~G~~v~~g 268 (364)
+.+.+|.|+.. +|. ...+..+.+.|+|||.++...
T Consensus 225 l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 225 LNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred cCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 12448988753 443 236788899999999998754
No 165
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.97 E-value=0.011 Score=57.05 Aligned_cols=74 Identities=24% Similarity=0.330 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH----HHHHHcCCce-eeeCCChh----HHHHhc---CCccEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI----DRVLAAGAEQ-AVDYSSKD----IELAIK---GKFDAV 241 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~----~~~~~~g~~~-v~~~~~~~----~~~~i~---g~~D~v 241 (364)
++++++|+|++|++|..+++.+...|++|+++.+++.. +...+++... .+|..+.+ +.+.+. +++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 57899999999999999999999999999998765432 2334455432 23544432 222222 459999
Q ss_pred EECCCC
Q 017901 242 LDTIGA 247 (364)
Q Consensus 242 id~~g~ 247 (364)
|.+.|.
T Consensus 289 i~~AG~ 294 (450)
T PRK08261 289 VHNAGI 294 (450)
T ss_pred EECCCc
Confidence 999984
No 166
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.97 E-value=0.0027 Score=56.67 Aligned_cols=103 Identities=28% Similarity=0.384 Sum_probs=62.1
Q ss_pred HHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCceeeeCCChhHHHHhcCC
Q 017901 163 WRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQAVDYSSKDIELAIKGK 237 (364)
Q Consensus 163 ~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~v~~~~~~~~~~~i~g~ 237 (364)
+..+.+++++++|++||-.| +| .|..+..+|+..|++|++++.++++ + .+++.|...-+.....++.+ +.++
T Consensus 51 ~~~~~~~~~l~~G~~vLDiG-cG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~~-~~~~ 127 (273)
T PF02353_consen 51 LDLLCEKLGLKPGDRVLDIG-CG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYRD-LPGK 127 (273)
T ss_dssp HHHHHTTTT--TT-EEEEES--T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GGG----S
T ss_pred HHHHHHHhCCCCCCEEEEeC-CC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeeccc-cCCC
Confidence 33345788999999999999 45 8999999999999999999887764 3 34566643211111111111 1124
Q ss_pred ccEEEE-----CCCCc---hhHHHHHhhccCCCEEEEEc
Q 017901 238 FDAVLD-----TIGAP---ETERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 238 ~D~vid-----~~g~~---~~~~~~~~~l~~~G~~v~~g 268 (364)
+|.|+. .+|.. ..+..+.++|+|||+++.-.
T Consensus 128 fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~ 166 (273)
T PF02353_consen 128 FDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT 166 (273)
T ss_dssp -SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred CCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence 888765 46543 35788899999999997443
No 167
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=96.96 E-value=0.0091 Score=53.89 Aligned_cols=96 Identities=17% Similarity=0.127 Sum_probs=59.9
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHH----HHcCCceeeeCCChhHHHHhcCCccEEEECC
Q 017901 172 MSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRV----LAAGAEQAVDYSSKDIELAIKGKFDAVLDTI 245 (364)
Q Consensus 172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~----~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~ 245 (364)
..++++|+-.| +|. |.+++.+++ .|+ +|+++..++.. +.+ ...+....+.....+......+++|+|+...
T Consensus 157 ~~~g~~VLDvG-cGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~~~~~~~~~fDlVvan~ 233 (288)
T TIGR00406 157 DLKDKNVIDVG-CGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIYLEQPIEGKADVIVANI 233 (288)
T ss_pred cCCCCEEEEeC-CCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecccccccCCCceEEEEec
Confidence 45789999999 665 888877776 465 89999766543 333 3333321111101111111223599999866
Q ss_pred CCc---hhHHHHHhhccCCCEEEEEccC
Q 017901 246 GAP---ETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 246 g~~---~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
... ..+..+.+.|++||.++..|..
T Consensus 234 ~~~~l~~ll~~~~~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 234 LAEVIKELYPQFSRLVKPGGWLILSGIL 261 (288)
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence 543 3567788999999999988754
No 168
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.011 Score=52.49 Aligned_cols=97 Identities=20% Similarity=0.274 Sum_probs=63.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc-ee--eeCCChh-HH---HHhc---CCccEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-QA--VDYSSKD-IE---LAIK---GKFDAV 241 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~-~v--~~~~~~~-~~---~~i~---g~~D~v 241 (364)
.+++++|+|+++++|..+++.+...|++|+.+.++.+. +...+++.. .+ .|..+.+ +. +.+. +++|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46799999999999999999999999999999887653 334454432 12 2333332 22 2221 458999
Q ss_pred EECCCCch------------------------hHHHHHhhc-cCCCEEEEEccC
Q 017901 242 LDTIGAPE------------------------TERLGLNFL-KRGGHYMTLHGE 270 (364)
Q Consensus 242 id~~g~~~------------------------~~~~~~~~l-~~~G~~v~~g~~ 270 (364)
|.+.|... ..+.++..+ +.+|++|.++..
T Consensus 85 v~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~ 138 (261)
T PRK08265 85 VNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSI 138 (261)
T ss_pred EECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECch
Confidence 99987420 122334444 567899988754
No 169
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.92 E-value=0.012 Score=47.82 Aligned_cols=98 Identities=18% Similarity=0.327 Sum_probs=62.8
Q ss_pred hccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHH
Q 017901 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIE 231 (364)
Q Consensus 152 aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 231 (364)
-..+|++....+..|....---.|++++|.|.+..+|.-+..++...|++|+.+.+.. .++.
T Consensus 13 ~~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T------------------~~l~ 74 (160)
T PF02882_consen 13 PGFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT------------------KNLQ 74 (160)
T ss_dssp TSS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS------------------SSHH
T ss_pred CCCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC------------------Cccc
Confidence 3455666666666664433345789999999888999999999999999988764332 2233
Q ss_pred HHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 232 ~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
+.++. +|+|+.++|.+..+. .+++++|..++.+|..
T Consensus 75 ~~~~~-ADIVVsa~G~~~~i~--~~~ik~gavVIDvG~~ 110 (160)
T PF02882_consen 75 EITRR-ADIVVSAVGKPNLIK--ADWIKPGAVVIDVGIN 110 (160)
T ss_dssp HHHTT-SSEEEE-SSSTT-B---GGGS-TTEEEEE--CE
T ss_pred ceeee-ccEEeeeeccccccc--cccccCCcEEEecCCc
Confidence 34444 999999999984443 4688999999999865
No 170
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.92 E-value=0.016 Score=52.86 Aligned_cols=97 Identities=26% Similarity=0.356 Sum_probs=67.5
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-----HHHHHcCCceeeeCCChhHHHHhc--CCc
Q 017901 168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-----DRVLAAGAEQAVDYSSKDIELAIK--GKF 238 (364)
Q Consensus 168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-----~~~~~~g~~~v~~~~~~~~~~~i~--g~~ 238 (364)
+...++++++||..| +| .|..++.+++..+. .|+++..+++. +.+.+.|.+.+.... .+..+... +++
T Consensus 74 ~~L~i~~g~~VLDIG-~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~-gD~~~~~~~~~~f 150 (322)
T PRK13943 74 EWVGLDKGMRVLEIG-GG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC-GDGYYGVPEFAPY 150 (322)
T ss_pred HhcCCCCCCEEEEEe-CC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-CChhhcccccCCc
Confidence 456788999999999 55 69999999998764 68888776653 234556765433221 12222111 349
Q ss_pred cEEEECCCCchhHHHHHhhccCCCEEEEE
Q 017901 239 DAVLDTIGAPETERLGLNFLKRGGHYMTL 267 (364)
Q Consensus 239 D~vid~~g~~~~~~~~~~~l~~~G~~v~~ 267 (364)
|+|+.+.+.........+.|+++|+++..
T Consensus 151 D~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 151 DVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred cEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 99999988765666888999999998764
No 171
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.91 E-value=0.012 Score=54.27 Aligned_cols=74 Identities=19% Similarity=0.266 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCce---eeeCCChh-H---HHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQ---AVDYSSKD-I---ELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~---v~~~~~~~-~---~~~i~---g~~ 238 (364)
.+++++|+||+|++|..+++.+...|++|+.+.++++. + .+++.|... ..|..+.+ + .+.+. |++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 46789999999999999999999999999999887653 2 233445432 13444432 2 22221 569
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|++.|.
T Consensus 87 D~lInnAg~ 95 (334)
T PRK07109 87 DTWVNNAMV 95 (334)
T ss_pred CEEEECCCc
Confidence 999999985
No 172
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.91 E-value=0.012 Score=52.28 Aligned_cols=96 Identities=19% Similarity=0.324 Sum_probs=71.1
Q ss_pred ccccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHH
Q 017901 153 SAIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIE 231 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 231 (364)
+..||+....+..| +..++ -.|++|+|.|.+..+|.-++.++...|++|+.+.+ .+.++.
T Consensus 135 ~~~PcTp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs------------------~t~~l~ 195 (285)
T PRK14191 135 GFVPATPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHI------------------LTKDLS 195 (285)
T ss_pred CCCCCcHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeC------------------CcHHHH
Confidence 34577776666666 44444 36999999997779999999999999999887632 122334
Q ss_pred HHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 232 ~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
+.++. +|+++-++|.+..+. -+++++|..++.+|..
T Consensus 196 ~~~~~-ADIvV~AvG~p~~i~--~~~vk~GavVIDvGi~ 231 (285)
T PRK14191 196 FYTQN-ADIVCVGVGKPDLIK--ASMVKKGAVVVDIGIN 231 (285)
T ss_pred HHHHh-CCEEEEecCCCCcCC--HHHcCCCcEEEEeecc
Confidence 44444 999999999984433 5678999999999964
No 173
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=96.87 E-value=0.021 Score=47.19 Aligned_cols=99 Identities=20% Similarity=0.239 Sum_probs=70.1
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-----HHHHHcCCce--eeeCCChhHHHHhcCCcc
Q 017901 168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-----DRVLAAGAEQ--AVDYSSKDIELAIKGKFD 239 (364)
Q Consensus 168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-----~~~~~~g~~~--v~~~~~~~~~~~i~g~~D 239 (364)
....+++|+.++=.|+. .|..++++++.. ..+|+++.++++. ..++++|.+. ++..+.++....+. .+|
T Consensus 28 s~L~~~~g~~l~DIGaG--tGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~d 104 (187)
T COG2242 28 SKLRPRPGDRLWDIGAG--TGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPD 104 (187)
T ss_pred HhhCCCCCCEEEEeCCC--ccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCC
Confidence 45678999988888843 588888998544 3499999887763 3467888774 44444444333332 389
Q ss_pred EEEECCCCc--hhHHHHHhhccCCCEEEEEcc
Q 017901 240 AVLDTIGAP--ETERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 240 ~vid~~g~~--~~~~~~~~~l~~~G~~v~~g~ 269 (364)
.+|---|.. ..++.++..|+++|++|.-..
T Consensus 105 aiFIGGg~~i~~ile~~~~~l~~ggrlV~nai 136 (187)
T COG2242 105 AIFIGGGGNIEEILEAAWERLKPGGRLVANAI 136 (187)
T ss_pred EEEECCCCCHHHHHHHHHHHcCcCCeEEEEee
Confidence 998765542 478899999999999997654
No 174
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.87 E-value=0.0074 Score=50.30 Aligned_cols=89 Identities=19% Similarity=0.162 Sum_probs=64.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHH-HHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch--
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-VLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE-- 249 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~-~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~-- 249 (364)
-.|.+|.|.| .|.+|..+++.++.+|++|++..+...... ....++. +. ++.+.+.. .|+|+.+....+
T Consensus 34 l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~----~~--~l~ell~~-aDiv~~~~plt~~T 105 (178)
T PF02826_consen 34 LRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVE----YV--SLDELLAQ-ADIVSLHLPLTPET 105 (178)
T ss_dssp STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEE----ES--SHHHHHHH--SEEEE-SSSSTTT
T ss_pred cCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhcccccce----ee--ehhhhcch-hhhhhhhhcccccc
Confidence 3589999999 899999999999999999999998877643 5555542 11 23333334 899999887432
Q ss_pred ---hHHHHHhhccCCCEEEEEcc
Q 017901 250 ---TERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 250 ---~~~~~~~~l~~~G~~v~~g~ 269 (364)
.-...+..++++..+|.++-
T Consensus 106 ~~li~~~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 106 RGLINAEFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp TTSBSHHHHHTSTTTEEEEESSS
T ss_pred ceeeeeeeeeccccceEEEeccc
Confidence 12577899999999998874
No 175
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.87 E-value=0.014 Score=51.74 Aligned_cols=108 Identities=20% Similarity=0.213 Sum_probs=75.0
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCceeeeCCChhHHHHh
Q 017901 160 LTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQAVDYSSKDIELAI 234 (364)
Q Consensus 160 ~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~v~~~~~~~~~~~i 234 (364)
..++..+.++.++++|+++|=.| ++-|.+++.+|+..|++|++++-++++ +.+++.|...-+...-.++.+.-
T Consensus 58 ~~k~~~~~~kl~L~~G~~lLDiG--CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd~~ 135 (283)
T COG2230 58 RAKLDLILEKLGLKPGMTLLDIG--CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRDFE 135 (283)
T ss_pred HHHHHHHHHhcCCCCCCEEEEeC--CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccccccc
Confidence 35566666889999999999999 448999999999999999999887764 33567776521111111111111
Q ss_pred cCCccEEE-----ECCCCc---hhHHHHHhhccCCCEEEEEccC
Q 017901 235 KGKFDAVL-----DTIGAP---ETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 235 ~g~~D~vi-----d~~g~~---~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
+++|-|+ +.+|.. .-+..+-++|+++|++++....
T Consensus 136 -e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~ 178 (283)
T COG2230 136 -EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT 178 (283)
T ss_pred -cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence 2366654 456662 3577889999999999877654
No 176
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.84 E-value=0.02 Score=46.32 Aligned_cols=101 Identities=20% Similarity=0.193 Sum_probs=66.5
Q ss_pred HHHHHHHh-cccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCcc
Q 017901 162 AWRALKCA-ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFD 239 (364)
Q Consensus 162 a~~~l~~~-~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D 239 (364)
.+.++.+. ...-.|++++|.| -|.+|...++.++.+|++|+++..++.+ -.+..-|+. +. .+.+.+.. .|
T Consensus 9 ~~d~i~r~t~~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~-v~-----~~~~a~~~-ad 80 (162)
T PF00670_consen 9 LVDGIMRATNLMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFE-VM-----TLEEALRD-AD 80 (162)
T ss_dssp HHHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-E-EE------HHHHTTT--S
T ss_pred HHHHHHhcCceeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcE-ec-----CHHHHHhh-CC
Confidence 34444333 3346899999999 9999999999999999999999766554 445556664 22 23444444 89
Q ss_pred EEEECCCCchh-HHHHHhhccCCCEEEEEccC
Q 017901 240 AVLDTIGAPET-ERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 240 ~vid~~g~~~~-~~~~~~~l~~~G~~v~~g~~ 270 (364)
++|-++|.... ..+-++.|+.+..+..+|..
T Consensus 81 i~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~ 112 (162)
T PF00670_consen 81 IFVTATGNKDVITGEHFRQMKDGAILANAGHF 112 (162)
T ss_dssp EEEE-SSSSSSB-HHHHHHS-TTEEEEESSSS
T ss_pred EEEECCCCccccCHHHHHHhcCCeEEeccCcC
Confidence 99999998754 45888999999988888865
No 177
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.84 E-value=0.014 Score=51.94 Aligned_cols=95 Identities=17% Similarity=0.232 Sum_probs=72.1
Q ss_pred cccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901 154 AIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL 232 (364)
Q Consensus 154 ~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 232 (364)
..||+....+..+ +..++ -.|++++|.|.+..+|.-++.++...|++|+.+.+. +.++.+
T Consensus 138 ~~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~------------------T~~l~~ 198 (285)
T PRK10792 138 LRPCTPRGIMTLL-ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRF------------------TKNLRH 198 (285)
T ss_pred CCCCCHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECC------------------CCCHHH
Confidence 4577776677666 44444 369999999988889999999999999999887442 223444
Q ss_pred HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.++. +|++|.++|.+..+. -+.+++|..++.+|..
T Consensus 199 ~~~~-ADIvi~avG~p~~v~--~~~vk~gavVIDvGin 233 (285)
T PRK10792 199 HVRN-ADLLVVAVGKPGFIP--GEWIKPGAIVIDVGIN 233 (285)
T ss_pred HHhh-CCEEEEcCCCccccc--HHHcCCCcEEEEcccc
Confidence 4444 999999999985444 3889999999999954
No 178
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=96.83 E-value=0.022 Score=45.28 Aligned_cols=96 Identities=18% Similarity=0.201 Sum_probs=70.4
Q ss_pred cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHH
Q 017901 154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA 233 (364)
Q Consensus 154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 233 (364)
..++........+....---.|++++|.|.+..+|.-++.++...|++|+.+.+... ++.+.
T Consensus 7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~------------------~l~~~ 68 (140)
T cd05212 7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI------------------QLQSK 68 (140)
T ss_pred ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc------------------CHHHH
Confidence 445555555555544333347999999999999999999999999999988854321 23334
Q ss_pred hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
++. +|+|+-++|.+..++ -+++++|..++.+|..
T Consensus 69 v~~-ADIVvsAtg~~~~i~--~~~ikpGa~Vidvg~~ 102 (140)
T cd05212 69 VHD-ADVVVVGSPKPEKVP--TEWIKPGATVINCSPT 102 (140)
T ss_pred Hhh-CCEEEEecCCCCccC--HHHcCCCCEEEEcCCC
Confidence 444 999999999984443 6789999999988864
No 179
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.82 E-value=0.015 Score=52.21 Aligned_cols=97 Identities=19% Similarity=0.270 Sum_probs=72.0
Q ss_pred ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901 153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL 232 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 232 (364)
+..||+.......|....---.|++|.+.|.++.+|.-.+.++...|++|+...+... +..+
T Consensus 137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~------------------~l~e 198 (301)
T PRK14194 137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST------------------DAKA 198 (301)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC------------------CHHH
Confidence 3457777666666644333347999999997779999999999999999998844322 2333
Q ss_pred HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.++. +|+||-++|.+..+...+ +++|..+|.+|..
T Consensus 199 ~~~~-ADIVIsavg~~~~v~~~~--ik~GaiVIDvgin 233 (301)
T PRK14194 199 LCRQ-ADIVVAAVGRPRLIDADW--LKPGAVVIDVGIN 233 (301)
T ss_pred HHhc-CCEEEEecCChhcccHhh--ccCCcEEEEeccc
Confidence 3444 999999999986665544 9999999999864
No 180
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.022 Score=49.99 Aligned_cols=96 Identities=20% Similarity=0.351 Sum_probs=61.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H-H---HHHcCCc-e--eeeCCChh-H---HHHhc---CC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D-R---VLAAGAE-Q--AVDYSSKD-I---ELAIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~-~---~~~~g~~-~--v~~~~~~~-~---~~~i~---g~ 237 (364)
.+++++|+|++|.+|..+++.+...|.+|+++.++... + . +...+.. . ..|..+.+ + .+.+. ++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 46789999999999999999998899999988775431 1 1 2222322 1 12444332 2 22221 34
Q ss_pred ccEEEECCCCc-------------------hhHHHHHhhccCCCEEEEEcc
Q 017901 238 FDAVLDTIGAP-------------------ETERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 238 ~D~vid~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~ 269 (364)
+|++|.+.|.. ..++.+.+.+..+|+++.++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 89999888642 123455555666789988865
No 181
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.73 E-value=0.018 Score=51.69 Aligned_cols=96 Identities=18% Similarity=0.295 Sum_probs=71.5
Q ss_pred ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEee-CCccHHHHHHcCCceeeeCCChhHH
Q 017901 153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC-GSKSIDRVLAAGAEQAVDYSSKDIE 231 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~-~~~~~~~~~~~g~~~v~~~~~~~~~ 231 (364)
+..||+....+..|....---.|++|+|.|.++.+|.-++.++...|++|++.. ++.. +.
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-------------------l~ 196 (296)
T PRK14188 136 ALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-------------------LP 196 (296)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-------------------HH
Confidence 345777666666664432235799999999999999999999999999999873 3331 22
Q ss_pred HHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 232 ~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
+.++. .|+|+-++|.+..+... ++++|..++.+|..
T Consensus 197 e~~~~-ADIVIsavg~~~~v~~~--~lk~GavVIDvGin 232 (296)
T PRK14188 197 AVCRR-ADILVAAVGRPEMVKGD--WIKPGATVIDVGIN 232 (296)
T ss_pred HHHhc-CCEEEEecCChhhcchh--eecCCCEEEEcCCc
Confidence 33334 89999999998655544 39999999999865
No 182
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.72 E-value=0.02 Score=48.41 Aligned_cols=74 Identities=30% Similarity=0.326 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc----CCce-eeeCCC-hhHHHHhcCCccEEEECC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA----GAEQ-AVDYSS-KDIELAIKGKFDAVLDTI 245 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~----g~~~-v~~~~~-~~~~~~i~g~~D~vid~~ 245 (364)
.+.+++|.|++|.+|..++..+...|++|+.+.++.++ ....++ +... ..+..+ .++.+.+.+ +|+||.++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~diVi~at 105 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKG-ADVVFAAG 105 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhc-CCEEEECC
Confidence 56899999988999999998888889999988876553 223322 2221 122222 344455556 99999998
Q ss_pred CCc
Q 017901 246 GAP 248 (364)
Q Consensus 246 g~~ 248 (364)
...
T Consensus 106 ~~g 108 (194)
T cd01078 106 AAG 108 (194)
T ss_pred CCC
Confidence 876
No 183
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.71 E-value=0.0091 Score=48.88 Aligned_cols=90 Identities=21% Similarity=0.357 Sum_probs=63.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCc----eeeeCCChhHHHHhcCCccEEEECCCCch---
Q 017901 177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE----QAVDYSSKDIELAIKGKFDAVLDTIGAPE--- 249 (364)
Q Consensus 177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~----~v~~~~~~~~~~~i~g~~D~vid~~g~~~--- 249 (364)
+|.|.||+|.+|....+-|+.+|-.|++++|++.+..++ .+.+ .+++. ..+.+.+.| +|+||++.|...
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-~~~~i~q~Difd~--~~~a~~l~g-~DaVIsA~~~~~~~~ 77 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-QGVTILQKDIFDL--TSLASDLAG-HDAVISAFGAGASDN 77 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-ccceeecccccCh--hhhHhhhcC-CceEEEeccCCCCCh
Confidence 588999999999999999999999999999998763222 1111 12222 234456668 999999988651
Q ss_pred ------hHHHHHhhccCCC--EEEEEccC
Q 017901 250 ------TERLGLNFLKRGG--HYMTLHGE 270 (364)
Q Consensus 250 ------~~~~~~~~l~~~G--~~v~~g~~ 270 (364)
..+..+..|+.-| |+..+|+.
T Consensus 78 ~~~~~k~~~~li~~l~~agv~RllVVGGA 106 (211)
T COG2910 78 DELHSKSIEALIEALKGAGVPRLLVVGGA 106 (211)
T ss_pred hHHHHHHHHHHHHHHhhcCCeeEEEEcCc
Confidence 1234666777643 78888875
No 184
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.011 Score=53.60 Aligned_cols=74 Identities=16% Similarity=0.200 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCC--ce-e--eeCCChh----HHHHhc---CCcc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGA--EQ-A--VDYSSKD----IELAIK---GKFD 239 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~--~~-v--~~~~~~~----~~~~i~---g~~D 239 (364)
.|++++|+|++|++|..+++.+...|++|+.+.++.+. +...+++. .. . .|..+.+ +.+.+. |++|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 57899999999999999999999999999999876653 33455542 11 1 3444432 222221 5699
Q ss_pred EEEECCCC
Q 017901 240 AVLDTIGA 247 (364)
Q Consensus 240 ~vid~~g~ 247 (364)
++|++.|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999985
No 185
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.68 E-value=0.014 Score=55.51 Aligned_cols=144 Identities=18% Similarity=0.272 Sum_probs=92.1
Q ss_pred cccccceeEEEEeecCCCCCCCCCCEEEEecC--------------CCCCCCcceeEEeecCCcccc---C-CCCCChhh
Q 017901 90 LILGRDISGEVAAVGASVRSLTVGQEVFGALH--------------PTAVRGTYADYAVLSEDELTP---K-PVSVTHAD 151 (364)
Q Consensus 90 ~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~--------------~~~~~g~~~~~~~~~~~~~~~---i-p~~~~~~~ 151 (364)
..-|.|+++-+.+|++++...-.|+.-+ +.. +...++.|++++.++. .+.. | +..+|...
T Consensus 88 ~~~~~~a~~hl~~Va~GldS~V~GE~qI-~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~ 165 (417)
T TIGR01035 88 ILTGESAVEHLFRVASGLDSMVVGETQI-LGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISS 165 (417)
T ss_pred hcCchHHHHHHHHHHhhhhhhhcCChHH-HHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHH
Confidence 3458899999999999887755565443 110 1124567888877766 2221 3 22233221
Q ss_pred hccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH--HHHHHcCCceeeeCCCh
Q 017901 152 ASAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI--DRVLAAGAEQAVDYSSK 228 (364)
Q Consensus 152 aa~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~--~~~~~~g~~~v~~~~~~ 228 (364)
+ |.....+.....++++++|.| +|.+|..+++.++..| .+|+++.++.++ +++.++|.. .++. .
T Consensus 166 ~---------Av~la~~~~~~l~~~~VlViG-aG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~--~ 232 (417)
T TIGR01035 166 A---------AVELAERIFGSLKGKKALLIG-AGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF--E 232 (417)
T ss_pred H---------HHHHHHHHhCCccCCEEEEEC-ChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH--H
Confidence 1 111112333446789999999 7999999999999999 578888776554 466777764 3322 3
Q ss_pred hHHHHhcCCccEEEECCCCch
Q 017901 229 DIELAIKGKFDAVLDTIGAPE 249 (364)
Q Consensus 229 ~~~~~i~g~~D~vid~~g~~~ 249 (364)
++.+.+.+ +|+||+|++.+.
T Consensus 233 ~l~~~l~~-aDvVi~aT~s~~ 252 (417)
T TIGR01035 233 DLEEYLAE-ADIVISSTGAPH 252 (417)
T ss_pred HHHHHHhh-CCEEEECCCCCC
Confidence 45555556 999999999863
No 186
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.68 E-value=0.014 Score=53.54 Aligned_cols=93 Identities=20% Similarity=0.241 Sum_probs=63.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceee-eCCCh-hHHHHhcCCccEEEECCCCch----
Q 017901 177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAV-DYSSK-DIELAIKGKFDAVLDTIGAPE---- 249 (364)
Q Consensus 177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~-~~~~~-~~~~~i~g~~D~vid~~g~~~---- 249 (364)
+|+|+||+|.+|..+++.+...|.+|++++|+.+. ..+...+++.+. |..+. ++...+.| +|+||.+++...
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g-~d~Vi~~~~~~~~~~~ 80 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKG-VTAIIDASTSRPSDLY 80 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCC-CCEEEECCCCCCCCcc
Confidence 69999999999999999999999999999987554 334445654332 33333 45566667 999999876421
Q ss_pred --------hHHHHHhhccCCC--EEEEEccC
Q 017901 250 --------TERLGLNFLKRGG--HYMTLHGE 270 (364)
Q Consensus 250 --------~~~~~~~~l~~~G--~~v~~g~~ 270 (364)
.....++.++..| ++|.++..
T Consensus 81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred chhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 1134455555544 78887753
No 187
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.0081 Score=55.37 Aligned_cols=74 Identities=19% Similarity=0.369 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCce---eeeCCChh----HHHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQ---AVDYSSKD----IELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~---v~~~~~~~----~~~~i~---g~~ 238 (364)
.+++++|+|+++++|..+++.+...|++|+.+.++++. + .+++.|.+. ..|..+.+ +.+.+. |++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 46899999999999999999999999999999887653 2 234455542 23444432 222221 559
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|++.|.
T Consensus 86 D~lVnnAG~ 94 (330)
T PRK06139 86 DVWVNNVGV 94 (330)
T ss_pred CEEEECCCc
Confidence 999999984
No 188
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.63 E-value=0.022 Score=48.66 Aligned_cols=98 Identities=19% Similarity=0.118 Sum_probs=64.6
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH-H----HHHHcCCc---eeeeCCChhHHHHhcCC
Q 017901 168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-D----RVLAAGAE---QAVDYSSKDIELAIKGK 237 (364)
Q Consensus 168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~-~----~~~~~g~~---~v~~~~~~~~~~~i~g~ 237 (364)
+...++++++||-.| + +.|..++.+++..+ .+|+++..+++. + .+.+.+.. .++..+..+..... ++
T Consensus 66 ~~l~~~~~~~VLDiG-~-GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~~~-~~ 142 (205)
T PRK13944 66 ELIEPRPGMKILEVG-T-GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLEKH-AP 142 (205)
T ss_pred HhcCCCCCCEEEEEC-c-CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCccC-CC
Confidence 556778999999998 3 45888888888764 589999777653 2 33445543 22332221111111 34
Q ss_pred ccEEEECCCCchhHHHHHhhccCCCEEEEEc
Q 017901 238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 238 ~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g 268 (364)
+|+|+-+.........+.+.|++||+++..-
T Consensus 143 fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~~ 173 (205)
T PRK13944 143 FDAIIVTAAASTIPSALVRQLKDGGVLVIPV 173 (205)
T ss_pred ccEEEEccCcchhhHHHHHhcCcCcEEEEEE
Confidence 9999877665546678889999999997653
No 189
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.61 E-value=0.027 Score=50.51 Aligned_cols=94 Identities=16% Similarity=0.240 Sum_probs=63.7
Q ss_pred cchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc
Q 017901 156 PFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK 235 (364)
Q Consensus 156 ~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~ 235 (364)
+++.......|....---.|++++|.|+++.+|...+.++...|++|+.+.+. . .++.+.++
T Consensus 140 p~T~~gii~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~-t-----------------~~L~~~~~ 201 (283)
T PRK14192 140 SATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR-T-----------------QNLPELVK 201 (283)
T ss_pred CCcHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC-c-----------------hhHHHHhc
Confidence 44442233334333334578999999965569999999999999977766541 1 12233334
Q ss_pred CCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 236 GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 236 g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
+ +|++|.++|.+..+ -.+.++++..++.+|..
T Consensus 202 ~-aDIvI~AtG~~~~v--~~~~lk~gavViDvg~n 233 (283)
T PRK14192 202 Q-ADIIVGAVGKPELI--KKDWIKQGAVVVDAGFH 233 (283)
T ss_pred c-CCEEEEccCCCCcC--CHHHcCCCCEEEEEEEe
Confidence 4 99999999987433 34679999999999854
No 190
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.032 Score=48.47 Aligned_cols=74 Identities=24% Similarity=0.432 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCC---ceee--eCCCh-hHHH---Hhc---CCcc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGA---EQAV--DYSSK-DIEL---AIK---GKFD 239 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~---~~v~--~~~~~-~~~~---~i~---g~~D 239 (364)
.+.+++|+||+|.+|..+++.+...|++|+++.++... ....++.. -+.+ |..+. ++.+ .+. +++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 46889999999999999999998889999999876543 23333321 1222 33332 2222 221 3499
Q ss_pred EEEECCCC
Q 017901 240 AVLDTIGA 247 (364)
Q Consensus 240 ~vid~~g~ 247 (364)
++|.+.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99999874
No 191
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.02 Score=50.89 Aligned_cols=97 Identities=13% Similarity=0.197 Sum_probs=62.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHc----CCc-ee--eeCCChh----HHHHhc--CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAA----GAE-QA--VDYSSKD----IELAIK--GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~----g~~-~v--~~~~~~~----~~~~i~--g~~ 238 (364)
.|++++|+|+++++|.++++.+...|++|+.+.++.+. + ...++ +.. .. .|..+.+ +.+.+. |++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 47899999999999999999999999999998876543 2 22221 322 12 2333322 222222 559
Q ss_pred cEEEECCCCch-------------------------hHHHHHhhcc--CCCEEEEEccC
Q 017901 239 DAVLDTIGAPE-------------------------TERLGLNFLK--RGGHYMTLHGE 270 (364)
Q Consensus 239 D~vid~~g~~~-------------------------~~~~~~~~l~--~~G~~v~~g~~ 270 (364)
|+++.+.|... ..+.+++.++ ..|++|.++..
T Consensus 87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~ 145 (263)
T PRK08339 87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSV 145 (263)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCc
Confidence 99999988521 0244555554 34899988764
No 192
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.55 E-value=0.017 Score=50.48 Aligned_cols=74 Identities=24% Similarity=0.398 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce-eeeCCChh-HHHHhc--CCccEEEECCCC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-AVDYSSKD-IELAIK--GKFDAVLDTIGA 247 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~-v~~~~~~~-~~~~i~--g~~D~vid~~g~ 247 (364)
.+++++|+|++|.+|..+++.+...|++|+.+.++.+. +...+.+... ..|..+.+ +...+. +++|++|.+.|.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag~ 87 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAGI 87 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 46799999999999999999999999999998886543 3334444432 23444432 222222 458999999985
No 193
>PRK06128 oxidoreductase; Provisional
Probab=96.55 E-value=0.035 Score=50.40 Aligned_cols=97 Identities=15% Similarity=0.248 Sum_probs=62.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-------HHHHHcCCce-e--eeCCChh----HHHHhc---C
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-------DRVLAAGAEQ-A--VDYSSKD----IELAIK---G 236 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-------~~~~~~g~~~-v--~~~~~~~----~~~~i~---g 236 (364)
.++++||+|++|++|..+++.+...|++|+.+.++.+. +.+++.+... + .|..+.+ +.+.+. +
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 46899999999999999999999999999887554321 2233344322 1 2333322 222221 4
Q ss_pred CccEEEECCCCc---h-----------------------hHHHHHhhccCCCEEEEEccC
Q 017901 237 KFDAVLDTIGAP---E-----------------------TERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 237 ~~D~vid~~g~~---~-----------------------~~~~~~~~l~~~G~~v~~g~~ 270 (364)
++|++|.+.|.. . .++.+++.++++|++|.++..
T Consensus 134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~ 193 (300)
T PRK06128 134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSI 193 (300)
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCc
Confidence 599999998842 0 124455566778899988754
No 194
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.037 Score=49.38 Aligned_cols=71 Identities=27% Similarity=0.320 Sum_probs=48.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce----eeeCCChhH----HHHhc---CCccE
Q 017901 177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ----AVDYSSKDI----ELAIK---GKFDA 240 (364)
Q Consensus 177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~----v~~~~~~~~----~~~i~---g~~D~ 240 (364)
+++|+||+|++|..+++.+...|++|+.+.++++. +. +...+... ..|..+.+. .+.+. +++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 68999999999999999999999999888776543 22 23334321 234444322 22221 45999
Q ss_pred EEECCCC
Q 017901 241 VLDTIGA 247 (364)
Q Consensus 241 vid~~g~ 247 (364)
+|.+.|.
T Consensus 82 lv~~ag~ 88 (272)
T PRK07832 82 VMNIAGI 88 (272)
T ss_pred EEECCCC
Confidence 9999985
No 195
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.53 E-value=0.034 Score=49.81 Aligned_cols=97 Identities=19% Similarity=0.333 Sum_probs=64.3
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCcee--eeCCChh----HHHHhc---CC
Q 017901 174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQA--VDYSSKD----IELAIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~v--~~~~~~~----~~~~i~---g~ 237 (364)
.+++++|+||+ +++|.++++.+...|++|+.+.++++. +...+++.... .|..+.+ +.+.+. |+
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 46899999986 799999999999999999988776431 22244443322 3444432 222222 56
Q ss_pred ccEEEECCCCch-----------------------------hHHHHHhhccCCCEEEEEccC
Q 017901 238 FDAVLDTIGAPE-----------------------------TERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 238 ~D~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~ 270 (364)
+|++|++.|... ..+.++..++.+|+++.++..
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~ 145 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYL 145 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecC
Confidence 999999988410 024566677778999988653
No 196
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.52 E-value=0.031 Score=48.95 Aligned_cols=74 Identities=24% Similarity=0.313 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcC--Cc-ee--eeCCCh-hHHH---Hhc---CCcc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAG--AE-QA--VDYSSK-DIEL---AIK---GKFD 239 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g--~~-~v--~~~~~~-~~~~---~i~---g~~D 239 (364)
.+.+++|+||+|.+|..+++.+...|++|+++.++.+. .....+. .. .. .|..+. ++.. .+. +++|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 45789999999999999999999999999999887653 2223322 21 11 233332 2222 111 4489
Q ss_pred EEEECCCC
Q 017901 240 AVLDTIGA 247 (364)
Q Consensus 240 ~vid~~g~ 247 (364)
++|.+.|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99999885
No 197
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.51 E-value=0.029 Score=49.89 Aligned_cols=97 Identities=13% Similarity=0.216 Sum_probs=72.3
Q ss_pred ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901 153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL 232 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 232 (364)
+..||+....+..|....---.|++++|.|.+..+|.=+..++...+++|+.+.+. +.++.+
T Consensus 137 ~~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~------------------T~~l~~ 198 (284)
T PRK14177 137 TYLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSK------------------TQNLPS 198 (284)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC------------------CCCHHH
Confidence 34567666666656443333579999999999999999999999999999876432 223333
Q ss_pred HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.++. +|+++-++|.+..+ --+++++|..++.+|..
T Consensus 199 ~~~~-ADIvIsAvGk~~~i--~~~~ik~gavVIDvGin 233 (284)
T PRK14177 199 IVRQ-ADIIVGAVGKPEFI--KADWISEGAVLLDAGYN 233 (284)
T ss_pred HHhh-CCEEEEeCCCcCcc--CHHHcCCCCEEEEecCc
Confidence 4444 99999999998443 37899999999999964
No 198
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.016 Score=50.93 Aligned_cols=74 Identities=19% Similarity=0.202 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce--eeeCCChhHHHHhcCCccEEEECCCC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ--AVDYSSKDIELAIKGKFDAVLDTIGA 247 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~--v~~~~~~~~~~~i~g~~D~vid~~g~ 247 (364)
.+++++|+||+|++|..+++.+...|++|+++.++... ......+... ..|..+.+-.....+++|++|++.|.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~ 89 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGI 89 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence 36799999999999999999999999999998876522 1111111111 23444433222222459999999985
No 199
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.028 Score=49.24 Aligned_cols=74 Identities=26% Similarity=0.338 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCc-ee--eeCCChhH----HHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAE-QA--VDYSSKDI----ELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~-~v--~~~~~~~~----~~~i~---g~~ 238 (364)
.+.+++|+|++|.+|..++..+...|++|+++.++++. .. ++..+.. .+ .|..+.+. .+.+. +++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46889999999999999999999999999998776553 22 2233322 12 24443321 12221 459
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999985
No 200
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.49 E-value=0.03 Score=49.80 Aligned_cols=97 Identities=15% Similarity=0.247 Sum_probs=71.8
Q ss_pred ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901 153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL 232 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 232 (364)
+..||+....+..|....---.|++++|.|.+..+|.=++.++...+++|+.+.+. +.++.+
T Consensus 134 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~------------------T~~l~~ 195 (282)
T PRK14169 134 TVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSK------------------TRNLKQ 195 (282)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCC------------------CCCHHH
Confidence 34577766666666433323478999999999999999999999999998866322 223344
Q ss_pred HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.++. +|+++-++|.+..+ --+++++|..++.+|..
T Consensus 196 ~~~~-ADIvI~AvG~p~~i--~~~~vk~GavVIDvGin 230 (282)
T PRK14169 196 LTKE-ADILVVAVGVPHFI--GADAVKPGAVVIDVGIS 230 (282)
T ss_pred HHhh-CCEEEEccCCcCcc--CHHHcCCCcEEEEeecc
Confidence 4444 99999999998443 35789999999999965
No 201
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.48 E-value=0.028 Score=48.29 Aligned_cols=97 Identities=18% Similarity=0.241 Sum_probs=65.3
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH-H----HHHHcCCce--eeeCCChh-HHHHhcCC
Q 017901 168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-D----RVLAAGAEQ--AVDYSSKD-IELAIKGK 237 (364)
Q Consensus 168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~-~----~~~~~g~~~--v~~~~~~~-~~~~i~g~ 237 (364)
....++++++||-.| ++.|..+..+++..+ .+|+++..+++. + .+++.|.++ ++..+... +.. .++
T Consensus 70 ~~l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~~~--~~~ 145 (212)
T PRK13942 70 ELLDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGYEE--NAP 145 (212)
T ss_pred HHcCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCc--CCC
Confidence 566789999999998 346888888888765 589999777653 3 344455432 22222111 111 134
Q ss_pred ccEEEECCCCchhHHHHHhhccCCCEEEEEc
Q 017901 238 FDAVLDTIGAPETERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 238 ~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g 268 (364)
+|+|+-............+.|++||+++..-
T Consensus 146 fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~~ 176 (212)
T PRK13942 146 YDRIYVTAAGPDIPKPLIEQLKDGGIMVIPV 176 (212)
T ss_pred cCEEEECCCcccchHHHHHhhCCCcEEEEEE
Confidence 9998776555556778899999999988753
No 202
>PRK07985 oxidoreductase; Provisional
Probab=96.47 E-value=0.028 Score=50.92 Aligned_cols=97 Identities=19% Similarity=0.247 Sum_probs=61.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc---HHH----HHHcCCce---eeeCCChh-H---HHHhc---C
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS---IDR----VLAAGAEQ---AVDYSSKD-I---ELAIK---G 236 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~---~~~----~~~~g~~~---v~~~~~~~-~---~~~i~---g 236 (364)
.+++++|+||++++|..+++.+...|++|+.+.++.+ .+. +.+.+... ..|..+.+ + .+.+. |
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 5678999999999999999999999999988765432 111 22333321 22333332 2 12221 5
Q ss_pred CccEEEECCCCch--------------------------hHHHHHhhccCCCEEEEEccC
Q 017901 237 KFDAVLDTIGAPE--------------------------TERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 237 ~~D~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~ 270 (364)
++|+++.+.|... .++.+++.++.+|++|.++..
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~ 187 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSI 187 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCc
Confidence 5899999887420 123455556678999988754
No 203
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.022 Score=50.24 Aligned_cols=74 Identities=20% Similarity=0.300 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce-eeeCCChh----HHHHhc---CCccEEEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-AVDYSSKD----IELAIK---GKFDAVLD 243 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~-v~~~~~~~----~~~~i~---g~~D~vid 243 (364)
.|++++|+||+|.+|..+++.+...|++|+++.+++.. ....+++... ..|..+.+ +.+.+. +++|++|.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 47899999999999999999999999999999877653 2334444321 23444432 222221 45899999
Q ss_pred CCCC
Q 017901 244 TIGA 247 (364)
Q Consensus 244 ~~g~ 247 (364)
+.|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9874
No 204
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.47 E-value=0.032 Score=49.64 Aligned_cols=97 Identities=15% Similarity=0.196 Sum_probs=72.4
Q ss_pred ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901 153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL 232 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 232 (364)
+..||+....+..|....---.|++++|.|.+..+|.=++.++...+++|+.+-+. +.++.+
T Consensus 136 ~~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~------------------T~dl~~ 197 (282)
T PRK14180 136 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF------------------TTDLKS 197 (282)
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCC------------------CCCHHH
Confidence 34577776667666444333579999999999999999999999999999776332 122333
Q ss_pred HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.++. +|+++-++|.+..+. -+++++|..++.+|..
T Consensus 198 ~~k~-ADIvIsAvGkp~~i~--~~~vk~gavVIDvGin 232 (282)
T PRK14180 198 HTTK-ADILIVAVGKPNFIT--ADMVKEGAVVIDVGIN 232 (282)
T ss_pred Hhhh-cCEEEEccCCcCcCC--HHHcCCCcEEEEeccc
Confidence 3334 999999999984443 4889999999999964
No 205
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.45 E-value=0.035 Score=49.45 Aligned_cols=96 Identities=17% Similarity=0.197 Sum_probs=71.9
Q ss_pred ccccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHH
Q 017901 153 SAIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIE 231 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 231 (364)
+..||+....+..+ +..++ -.|++++|.|.+..+|.-++.++...|++|+.+.+. +.++.
T Consensus 142 ~~~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~------------------T~~l~ 202 (287)
T PRK14176 142 GLVPCTPHGVIRAL-EEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVF------------------TDDLK 202 (287)
T ss_pred CCCCCcHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEecc------------------CCCHH
Confidence 34577766666666 44444 479999999988889999999999999999777432 12333
Q ss_pred HHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 232 ~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
+.++. +|+++.++|.+..+ --+++++|..++.+|..
T Consensus 203 ~~~~~-ADIvv~AvG~p~~i--~~~~vk~gavVIDvGin 238 (287)
T PRK14176 203 KYTLD-ADILVVATGVKHLI--KADMVKEGAVIFDVGIT 238 (287)
T ss_pred HHHhh-CCEEEEccCCcccc--CHHHcCCCcEEEEeccc
Confidence 44444 99999999998544 35689999999999964
No 206
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.43 E-value=0.031 Score=49.79 Aligned_cols=95 Identities=15% Similarity=0.233 Sum_probs=71.7
Q ss_pred cccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901 154 AIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL 232 (364)
Q Consensus 154 ~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 232 (364)
..||+....+..| +..++ -.|++++|.|.+..+|.=++.++...+++|+.+.+. +.++.+
T Consensus 134 ~~PcTp~avi~lL-~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~------------------T~~l~~ 194 (287)
T PRK14173 134 LEPCTPAGVVRLL-KHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSK------------------TQDLPA 194 (287)
T ss_pred CCCCCHHHHHHHH-HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCC------------------CCCHHH
Confidence 4577766666666 44444 479999999999999999999999999998866332 223344
Q ss_pred HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.++. +|+++-++|.+..+ --+++++|..++.+|..
T Consensus 195 ~~~~-ADIvIsAvGkp~~i--~~~~vk~GavVIDVGin 229 (287)
T PRK14173 195 VTRR-ADVLVVAVGRPHLI--TPEMVRPGAVVVDVGIN 229 (287)
T ss_pred HHhh-CCEEEEecCCcCcc--CHHHcCCCCEEEEccCc
Confidence 4444 99999999998444 46889999999999965
No 207
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.42 E-value=0.032 Score=49.68 Aligned_cols=96 Identities=18% Similarity=0.248 Sum_probs=70.8
Q ss_pred cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHH
Q 017901 154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA 233 (364)
Q Consensus 154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 233 (364)
..||+.......|....---.|+++.+.|.++.+|.-++.++...|++|+..-+. +.++.+.
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~------------------t~~l~~~ 198 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSR------------------TRNLAEV 198 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCC------------------CCCHHHH
Confidence 4567666666666433333579999999988999999999999999999876211 1123344
Q ss_pred hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
++. +|+||-++|.+..+.. .++++|..+|.+|..
T Consensus 199 ~~~-ADIVI~avg~~~~v~~--~~ik~GavVIDvgin 232 (284)
T PRK14179 199 ARK-ADILVVAIGRGHFVTK--EFVKEGAVVIDVGMN 232 (284)
T ss_pred Hhh-CCEEEEecCccccCCH--HHccCCcEEEEecce
Confidence 444 9999999999866554 359999999999865
No 208
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.016 Score=50.72 Aligned_cols=74 Identities=23% Similarity=0.386 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce-e--eeCCChh----HHHHhc---CCccEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-A--VDYSSKD----IELAIK---GKFDAV 241 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~-v--~~~~~~~----~~~~i~---g~~D~v 241 (364)
++++++|+||+|.+|...++.+...|++|+.+.++++. +...+++... . .|..+.+ +.+.+. +++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46799999999999999999999999999999877543 3344555432 2 2332221 222222 459999
Q ss_pred EECCCC
Q 017901 242 LDTIGA 247 (364)
Q Consensus 242 id~~g~ 247 (364)
|.+.|.
T Consensus 85 i~~ag~ 90 (249)
T PRK06500 85 FINAGV 90 (249)
T ss_pred EECCCC
Confidence 999874
No 209
>PRK06484 short chain dehydrogenase; Validated
Probab=96.42 E-value=0.03 Score=55.03 Aligned_cols=97 Identities=20% Similarity=0.287 Sum_probs=65.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHcCCce---eeeCCChh----HHHHhc---CCccEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGAEQ---AVDYSSKD----IELAIK---GKFDAV 241 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~g~~~---v~~~~~~~----~~~~i~---g~~D~v 241 (364)
.|++++|+|+++++|...++.+...|++|+.+.++.+. + ...+++... ..|..+.+ +.+.+. |++|++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 57889999999999999999999999999999886553 2 334444332 23443332 222222 569999
Q ss_pred EECCCCch---h-----------------------HHHHHhhccCCCEEEEEccC
Q 017901 242 LDTIGAPE---T-----------------------ERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 242 id~~g~~~---~-----------------------~~~~~~~l~~~G~~v~~g~~ 270 (364)
|.+.|... . .+.++..++.+|++|.++..
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~ 402 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSI 402 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECch
Confidence 99988420 0 24445566677999988754
No 210
>PRK09186 flagellin modification protein A; Provisional
Probab=96.42 E-value=0.048 Score=47.98 Aligned_cols=73 Identities=22% Similarity=0.345 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc----CCce----eeeCCChh-H---HHHhc---C
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA----GAEQ----AVDYSSKD-I---ELAIK---G 236 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~----g~~~----v~~~~~~~-~---~~~i~---g 236 (364)
.+++++|+|++|.+|..++..+...|++|+.+.++.+. +...++ +... ..|..+.+ + .+.+. +
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999876543 222222 2211 22444332 2 22221 4
Q ss_pred CccEEEECCC
Q 017901 237 KFDAVLDTIG 246 (364)
Q Consensus 237 ~~D~vid~~g 246 (364)
++|++|.+.|
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 5899999986
No 211
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.42 E-value=0.015 Score=51.69 Aligned_cols=97 Identities=16% Similarity=0.290 Sum_probs=66.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCce-ee----eCCCh-hHH---HHhc---C
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQ-AV----DYSSK-DIE---LAIK---G 236 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~-v~----~~~~~-~~~---~~i~---g 236 (364)
.|+.|+|+||++++|..++.-.-..|++++.+++..++ +.+++.+... ++ |.++. +.. +.+. |
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 57899999999999999998888899998888766543 4456666554 22 33332 222 2222 5
Q ss_pred CccEEEECCCCchh-------------------------HHHHHhhccCC--CEEEEEccC
Q 017901 237 KFDAVLDTIGAPET-------------------------ERLGLNFLKRG--GHYMTLHGE 270 (364)
Q Consensus 237 ~~D~vid~~g~~~~-------------------------~~~~~~~l~~~--G~~v~~g~~ 270 (364)
++|+.+++.|-... ...++..|++. |++|.++..
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSi 151 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSI 151 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecc
Confidence 69999998884311 25666666644 999988754
No 212
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.40 E-value=0.039 Score=49.16 Aligned_cols=96 Identities=18% Similarity=0.300 Sum_probs=72.2
Q ss_pred ccccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHH
Q 017901 153 SAIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIE 231 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 231 (364)
...||+.......|. ..++ -.|++++|.|.+..+|.-++.++...+++|+.+.+ .+.++.
T Consensus 136 ~~~PcTp~av~~lL~-~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs------------------~t~~l~ 196 (284)
T PRK14190 136 TFLPCTPHGILELLK-EYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHS------------------KTKNLA 196 (284)
T ss_pred CCCCCCHHHHHHHHH-HcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeC------------------CchhHH
Confidence 345777666666664 3343 47999999999999999999999999999987632 222344
Q ss_pred HHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 232 ~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
+.++. +|+++-++|.+.. ---+++++|..++.+|..
T Consensus 197 ~~~~~-ADIvI~AvG~p~~--i~~~~ik~gavVIDvGi~ 232 (284)
T PRK14190 197 ELTKQ-ADILIVAVGKPKL--ITADMVKEGAVVIDVGVN 232 (284)
T ss_pred HHHHh-CCEEEEecCCCCc--CCHHHcCCCCEEEEeecc
Confidence 44444 9999999999843 336778999999999975
No 213
>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)
Probab=96.40 E-value=0.04 Score=49.39 Aligned_cols=97 Identities=15% Similarity=0.253 Sum_probs=72.5
Q ss_pred ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901 153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL 232 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 232 (364)
+..||+....+..|....---.|++++|.|.+..+|.=+..++...|++|+.+-+. +.++.+
T Consensus 145 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~------------------T~nl~~ 206 (299)
T PLN02516 145 LFLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSR------------------TPDPES 206 (299)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC------------------CCCHHH
Confidence 45677776667666443323469999999999999999999999999999887432 223344
Q ss_pred HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.++. +|+++-++|.+..+. -+++++|..++.+|..
T Consensus 207 ~~~~-ADIvv~AvGk~~~i~--~~~vk~gavVIDvGin 241 (299)
T PLN02516 207 IVRE-ADIVIAAAGQAMMIK--GDWIKPGAAVIDVGTN 241 (299)
T ss_pred HHhh-CCEEEEcCCCcCccC--HHHcCCCCEEEEeecc
Confidence 4444 999999999974333 5789999999999965
No 214
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.028 Score=49.75 Aligned_cols=77 Identities=19% Similarity=0.265 Sum_probs=51.5
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH-HHcCCc----eeeeCCChh-H---HHHhc---CCc
Q 017901 172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV-LAAGAE----QAVDYSSKD-I---ELAIK---GKF 238 (364)
Q Consensus 172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~-~~~g~~----~v~~~~~~~-~---~~~i~---g~~ 238 (364)
.-++.+++|.|++|.+|..+++.+...|++|+.+.++.+. ..+ ....-. ...|..+.+ + .+.+. +++
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 3567899999999999999999999999999999886553 222 222211 122333332 2 12221 349
Q ss_pred cEEEECCCCc
Q 017901 239 DAVLDTIGAP 248 (364)
Q Consensus 239 D~vid~~g~~ 248 (364)
|+||.+.|..
T Consensus 88 d~vi~~ag~~ 97 (264)
T PRK12829 88 DVLVNNAGIA 97 (264)
T ss_pred CEEEECCCCC
Confidence 9999998853
No 215
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.34 E-value=0.019 Score=50.98 Aligned_cols=74 Identities=27% Similarity=0.291 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH-HHHcCCc-ee--eeCCChh-H---HHHhc---CCccEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAE-QA--VDYSSKD-I---ELAIK---GKFDAV 241 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~-~~~~g~~-~v--~~~~~~~-~---~~~i~---g~~D~v 241 (364)
.+++++|+|+++++|..+++.+...|++|+.+.++++. +. ..+++.. .. .|..+.+ . .+.+. |++|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 46899999999999999999999999999999887654 32 3333321 12 2333322 2 22221 559999
Q ss_pred EECCCC
Q 017901 242 LDTIGA 247 (364)
Q Consensus 242 id~~g~ 247 (364)
|.+.|.
T Consensus 85 i~~ag~ 90 (263)
T PRK06200 85 VGNAGI 90 (263)
T ss_pred EECCCC
Confidence 999884
No 216
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.023 Score=50.64 Aligned_cols=73 Identities=19% Similarity=0.358 Sum_probs=50.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcC-Cce-eeeCCChh-H---HHHhc---CCccEEEE
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAG-AEQ-AVDYSSKD-I---ELAIK---GKFDAVLD 243 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g-~~~-v~~~~~~~-~---~~~i~---g~~D~vid 243 (364)
+.+++|+||+|++|..+++.+...|++|+.+.++++. +...+++ ... ..|..+.+ + .+.+. +++|++|.
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN 84 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5789999999999999999888899999988876654 2334444 221 23444432 2 22221 45999999
Q ss_pred CCCC
Q 017901 244 TIGA 247 (364)
Q Consensus 244 ~~g~ 247 (364)
+.|.
T Consensus 85 ~ag~ 88 (273)
T PRK07825 85 NAGV 88 (273)
T ss_pred CCCc
Confidence 9884
No 217
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=96.29 E-value=0.046 Score=45.63 Aligned_cols=115 Identities=13% Similarity=0.141 Sum_probs=75.7
Q ss_pred ccccchHHHHHHHHHHhccc----------CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCcee
Q 017901 153 SAIPFAALTAWRALKCAARM----------SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQA 222 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~----------~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v 222 (364)
+.+||+....+..|. ..++ -.|++++|.|.+..+|.=++.++...||+|+.+..+.-..+.+.-.-.+-
T Consensus 31 ~~~PCTp~avi~lL~-~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs 109 (197)
T cd01079 31 SILPCTPLAIVKILE-FLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHE 109 (197)
T ss_pred CccCCCHHHHHHHHH-HhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccccccccccccc
Confidence 445777766666664 3333 57999999999999999999999999999997743322111000000000
Q ss_pred ee--CC-ChhHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 223 VD--YS-SKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 223 ~~--~~-~~~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
-. .+ ..++.+.++. +|+|+-++|.+ .+.---+++++|..+|.+|..
T Consensus 110 ~t~~~~~~~~l~~~~~~-ADIVIsAvG~~-~~~i~~d~ik~GavVIDVGi~ 158 (197)
T cd01079 110 KHHVTDEEAMTLDCLSQ-SDVVITGVPSP-NYKVPTELLKDGAICINFASI 158 (197)
T ss_pred cccccchhhHHHHHhhh-CCEEEEccCCC-CCccCHHHcCCCcEEEEcCCC
Confidence 00 00 1124555555 99999999998 332347899999999999965
No 218
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.052 Score=48.00 Aligned_cols=72 Identities=18% Similarity=0.314 Sum_probs=48.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHcC-Cc-e--eeeCCChh-HH---HHh----cCCccEE
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAG-AE-Q--AVDYSSKD-IE---LAI----KGKFDAV 241 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~g-~~-~--v~~~~~~~-~~---~~i----~g~~D~v 241 (364)
++++|+||+|.+|..+++.+...|++|+.+.++.+. + .....+ .. . ..|..+.+ +. ..+ .+++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 479999999999999999998899999999876654 3 233332 11 1 23433322 22 122 2458999
Q ss_pred EECCCC
Q 017901 242 LDTIGA 247 (364)
Q Consensus 242 id~~g~ 247 (364)
+.|.|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 999985
No 219
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.28 E-value=0.033 Score=49.31 Aligned_cols=75 Identities=21% Similarity=0.328 Sum_probs=49.8
Q ss_pred CCCCEEEEEcCCc-hHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHH-cCCcee----eeCCChh-H---HHHhc--
Q 017901 173 SEGQRLLVLGGGG-AVGFAAVQFSVASGCHVSATCGSKSI-DR----VLA-AGAEQA----VDYSSKD-I---ELAIK-- 235 (364)
Q Consensus 173 ~~g~~vli~g~~g-~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~-~g~~~v----~~~~~~~-~---~~~i~-- 235 (364)
..+++++|+|++| ++|.++++.+...|++|+.+.++++. +. +++ .+...+ .|..+.+ + .+.+.
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4578999999886 89999999999999999988776543 21 222 343222 2443332 2 22221
Q ss_pred -CCccEEEECCCC
Q 017901 236 -GKFDAVLDTIGA 247 (364)
Q Consensus 236 -g~~D~vid~~g~ 247 (364)
|++|++|.+.|.
T Consensus 95 ~g~id~li~~ag~ 107 (262)
T PRK07831 95 LGRLDVLVNNAGL 107 (262)
T ss_pred cCCCCEEEECCCC
Confidence 558999999984
No 220
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.27 E-value=0.048 Score=48.53 Aligned_cols=97 Identities=21% Similarity=0.282 Sum_probs=71.8
Q ss_pred ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901 153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL 232 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 232 (364)
...||+....+..|....---.|++++|.|.+..+|.=++.++...+++|+.+-+. +.++.+
T Consensus 135 ~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~------------------T~nl~~ 196 (282)
T PRK14166 135 GFLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK------------------TKDLSL 196 (282)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC------------------CCCHHH
Confidence 34577766666666443323479999999999999999999999999999866332 122333
Q ss_pred HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.++. +|+++-++|.+..+. -+++++|..++.+|..
T Consensus 197 ~~~~-ADIvIsAvGkp~~i~--~~~vk~GavVIDvGin 231 (282)
T PRK14166 197 YTRQ-ADLIIVAAGCVNLLR--SDMVKEGVIVVDVGIN 231 (282)
T ss_pred HHhh-CCEEEEcCCCcCccC--HHHcCCCCEEEEeccc
Confidence 4444 999999999984433 5689999999999965
No 221
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.27 E-value=0.043 Score=48.80 Aligned_cols=96 Identities=19% Similarity=0.304 Sum_probs=71.4
Q ss_pred cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHH
Q 017901 154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA 233 (364)
Q Consensus 154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 233 (364)
..||+.......|....---.|++++|.|.+..+|.=+..++...+++|+.+.+ .+.++.+.
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs------------------~T~~l~~~ 197 (284)
T PRK14170 136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHS------------------RTKDLPQV 197 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCC------------------CCCCHHHH
Confidence 457776666666643332346999999999999999999999999999886632 22234444
Q ss_pred hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
++. +|+++-++|.+.. ---+++++|..++.+|..
T Consensus 198 ~~~-ADIvI~AvG~~~~--i~~~~vk~GavVIDvGin 231 (284)
T PRK14170 198 AKE-ADILVVATGLAKF--VKKDYIKPGAIVIDVGMD 231 (284)
T ss_pred Hhh-CCEEEEecCCcCc--cCHHHcCCCCEEEEccCc
Confidence 444 9999999999844 335789999999999965
No 222
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.27 E-value=0.047 Score=48.44 Aligned_cols=95 Identities=19% Similarity=0.326 Sum_probs=71.2
Q ss_pred cccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901 154 AIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL 232 (364)
Q Consensus 154 ~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 232 (364)
..||+....+..|.. -++ -.|++++|.|.+..+|.=+..++...|++|+.+.+. +.++.+
T Consensus 137 ~~PcTp~av~~lL~~-~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~------------------T~~l~~ 197 (278)
T PRK14172 137 FLPCTPNSVITLIKS-LNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSK------------------TKNLKE 197 (278)
T ss_pred CcCCCHHHHHHHHHH-hCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC------------------CCCHHH
Confidence 457766666666643 343 479999999999999999999999999998776432 223334
Q ss_pred HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.++. +|+++-++|.+..+ --+++++|..+|.+|..
T Consensus 198 ~~~~-ADIvIsAvGkp~~i--~~~~ik~gavVIDvGin 232 (278)
T PRK14172 198 VCKK-ADILVVAIGRPKFI--DEEYVKEGAIVIDVGTS 232 (278)
T ss_pred HHhh-CCEEEEcCCCcCcc--CHHHcCCCcEEEEeecc
Confidence 4444 99999999998443 35779999999999865
No 223
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.27 E-value=0.05 Score=48.78 Aligned_cols=95 Identities=17% Similarity=0.266 Sum_probs=70.6
Q ss_pred cccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901 154 AIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL 232 (364)
Q Consensus 154 ~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 232 (364)
..||+....+..|. .-++ -.|++++|.|.+..+|.=+..++...|++|+.+.+. +.++.+
T Consensus 137 ~~PcTp~aii~lL~-~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~------------------T~~l~~ 197 (297)
T PRK14186 137 LRSCTPAGVMRLLR-SQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSR------------------TQDLAS 197 (297)
T ss_pred CCCCCHHHHHHHHH-HhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCC------------------CCCHHH
Confidence 44666666666563 3343 478999999999999999999999999999777332 223333
Q ss_pred HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.++. +|+++-++|.+..+ --+++++|..+|.+|..
T Consensus 198 ~~~~-ADIvIsAvGkp~~i--~~~~ik~gavVIDvGin 232 (297)
T PRK14186 198 ITRE-ADILVAAAGRPNLI--GAEMVKPGAVVVDVGIH 232 (297)
T ss_pred HHhh-CCEEEEccCCcCcc--CHHHcCCCCEEEEeccc
Confidence 4444 99999999998443 36789999999999965
No 224
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.26 E-value=0.089 Score=40.42 Aligned_cols=99 Identities=16% Similarity=0.084 Sum_probs=63.9
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH-HH----HHHcCCce--eeeCCChhHHHHhcCCcc
Q 017901 168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-DR----VLAAGAEQ--AVDYSSKDIELAIKGKFD 239 (364)
Q Consensus 168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~-~~----~~~~g~~~--v~~~~~~~~~~~i~g~~D 239 (364)
....+.++++++-.| +|. |..+..+++..+ .+|+++..++.. +. +...+... ++..+.........+++|
T Consensus 13 ~~~~~~~~~~vldlG-~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D 90 (124)
T TIGR02469 13 SKLRLRPGDVLWDIG-AGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPD 90 (124)
T ss_pred HHcCCCCCCEEEEeC-CCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCC
Confidence 445667788999998 554 999999998864 689999776553 33 34444432 222221111111123499
Q ss_pred EEEECCCCc---hhHHHHHhhccCCCEEEEEc
Q 017901 240 AVLDTIGAP---ETERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 240 ~vid~~g~~---~~~~~~~~~l~~~G~~v~~g 268 (364)
+|+...+.. ..++.+.+.|+++|+++...
T Consensus 91 ~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 91 RVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred EEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 999765432 36789999999999998754
No 225
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.26 E-value=0.029 Score=48.79 Aligned_cols=87 Identities=30% Similarity=0.457 Sum_probs=62.7
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HHHHHcCCcee-eeCCC-hhHHHHhcCCccEEEECCCC---c-
Q 017901 178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAEQA-VDYSS-KDIELAIKGKFDAVLDTIGA---P- 248 (364)
Q Consensus 178 vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~~~~g~~~v-~~~~~-~~~~~~i~g~~D~vid~~g~---~- 248 (364)
|+|.||+|.+|...++.+...+.+|.+++|+... ..++..|+..+ .|+.+ +++.+.++| +|.||.+++. .
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g-~d~v~~~~~~~~~~~ 79 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKG-VDAVFSVTPPSHPSE 79 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTT-CSEEEEESSCSCCCH
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcC-CceEEeecCcchhhh
Confidence 6899999999999999999999999999998753 45677888644 24433 356666778 9999999993 2
Q ss_pred -hhHHHHHhhccCCC--EEE
Q 017901 249 -ETERLGLNFLKRGG--HYM 265 (364)
Q Consensus 249 -~~~~~~~~~l~~~G--~~v 265 (364)
......+++.+.-| ++|
T Consensus 80 ~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 80 LEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHHHHHHHHHT-SEEE
T ss_pred hhhhhhHHHhhhccccceEE
Confidence 12345555555544 555
No 226
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.24 E-value=0.031 Score=49.20 Aligned_cols=74 Identities=22% Similarity=0.377 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce----eeeCCChh-H---HHHhc---CCccEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ----AVDYSSKD-I---ELAIK---GKFDAV 241 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~----v~~~~~~~-~---~~~i~---g~~D~v 241 (364)
.+++++|+||+|.+|..+++.+...|++|+.+.++.+. ....++.... ..|..+.+ + .+.+. +++|++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v 93 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDIL 93 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46799999999999999999999999999999887654 3333322111 22333321 2 22221 358999
Q ss_pred EECCCC
Q 017901 242 LDTIGA 247 (364)
Q Consensus 242 id~~g~ 247 (364)
|.+.|.
T Consensus 94 i~~ag~ 99 (255)
T PRK06841 94 VNSAGV 99 (255)
T ss_pred EECCCC
Confidence 999985
No 227
>PRK06196 oxidoreductase; Provisional
Probab=96.24 E-value=0.026 Score=51.67 Aligned_cols=74 Identities=16% Similarity=0.349 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcC-Cc-eeeeCCChh----HHHHhc---CCccEEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAG-AE-QAVDYSSKD----IELAIK---GKFDAVL 242 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g-~~-~v~~~~~~~----~~~~i~---g~~D~vi 242 (364)
.+.+++|+||+|++|..+++.+...|++|+.+.++.+. +.+.++. .. ...|..+.+ +.+.+. +++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 46899999999999999999999999999999887653 2223322 21 122333332 222222 4599999
Q ss_pred ECCCC
Q 017901 243 DTIGA 247 (364)
Q Consensus 243 d~~g~ 247 (364)
.+.|.
T Consensus 105 ~nAg~ 109 (315)
T PRK06196 105 NNAGV 109 (315)
T ss_pred ECCCC
Confidence 99884
No 228
>PRK08589 short chain dehydrogenase; Validated
Probab=96.23 E-value=0.024 Score=50.58 Aligned_cols=74 Identities=23% Similarity=0.376 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH---HHcCCc-e--eeeCCChh----HHHHhc---CCcc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV---LAAGAE-Q--AVDYSSKD----IELAIK---GKFD 239 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~---~~~g~~-~--v~~~~~~~----~~~~i~---g~~D 239 (364)
.++++||+|+++++|..+++.+...|++|+.+.++++. +.+ .+.+.. . ..|..+.+ +.+.+. |++|
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 84 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVD 84 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcC
Confidence 47899999999999999999999999999999887443 222 222322 1 23433332 222222 5599
Q ss_pred EEEECCCC
Q 017901 240 AVLDTIGA 247 (364)
Q Consensus 240 ~vid~~g~ 247 (364)
++|.+.|.
T Consensus 85 ~li~~Ag~ 92 (272)
T PRK08589 85 VLFNNAGV 92 (272)
T ss_pred EEEECCCC
Confidence 99999874
No 229
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.22 E-value=0.022 Score=43.11 Aligned_cols=92 Identities=21% Similarity=0.252 Sum_probs=58.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHH-HcCCeEEEeeCCccH-HHHHH----cCCceeeeCCChhH--HHHhcCCccEEEECC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSV-ASGCHVSATCGSKSI-DRVLA----AGAEQAVDYSSKDI--ELAIKGKFDAVLDTI 245 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~-~~g~~vi~~~~~~~~-~~~~~----~g~~~v~~~~~~~~--~~~i~g~~D~vid~~ 245 (364)
|+.+||-.| +| .|..+..+++ ..+++|+++..+++. +.+++ .+...-+.....++ .....+++|+|+...
T Consensus 1 p~~~vLDlG-cG-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~ 78 (112)
T PF12847_consen 1 PGGRVLDLG-CG-TGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSG 78 (112)
T ss_dssp TTCEEEEET-TT-TSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECS
T ss_pred CCCEEEEEc-Cc-CCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECC
Confidence 678999998 33 5888888888 578899999777653 43322 23222111111222 111113499999877
Q ss_pred -CCc---------hhHHHHHhhccCCCEEEEE
Q 017901 246 -GAP---------ETERLGLNFLKRGGHYMTL 267 (364)
Q Consensus 246 -g~~---------~~~~~~~~~l~~~G~~v~~ 267 (364)
... ..+..+.+.|+|||+++.-
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 79 FTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp GSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 221 1278899999999999853
No 230
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.22 E-value=0.068 Score=47.86 Aligned_cols=146 Identities=18% Similarity=0.174 Sum_probs=85.8
Q ss_pred CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHHH--HHHHHhcccCCCCEEEEEcCCch
Q 017901 109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTAW--RALKCAARMSEGQRLLVLGGGGA 186 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~--~~l~~~~~~~~g~~vli~g~~g~ 186 (364)
-++.|++.+..++ |.+|..-....++++.+++-+- ......|++ .+|. ..+++|++++=.| + +
T Consensus 108 P~rig~~f~I~Ps-------w~~~~~~~~~~~i~lDPGlAFG----TG~HpTT~lcL~~Le--~~~~~g~~vlDvG-c-G 172 (300)
T COG2264 108 PVRIGERFVIVPS-------WREYPEPSDELNIELDPGLAFG----TGTHPTTSLCLEALE--KLLKKGKTVLDVG-C-G 172 (300)
T ss_pred cEEeeeeEEECCC-------CccCCCCCCceEEEEccccccC----CCCChhHHHHHHHHH--HhhcCCCEEEEec-C-C
Confidence 3667887776654 5554322234566676665332 222233333 2332 2356999999998 3 3
Q ss_pred HHHHHHHHHHHcCC-eEEEeeCCccH-----HHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCc---hhHHHHHh
Q 017901 187 VGFAAVQFSVASGC-HVSATCGSKSI-----DRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAP---ETERLGLN 256 (364)
Q Consensus 187 ~G~~~~~~a~~~g~-~vi~~~~~~~~-----~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~---~~~~~~~~ 256 (364)
.|.+++..++. |+ +|+++..++-. +.++..+.+............... +++|+|+.++=.. ...+...+
T Consensus 173 SGILaIAa~kL-GA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~ 251 (300)
T COG2264 173 SGILAIAAAKL-GAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIKR 251 (300)
T ss_pred hhHHHHHHHHc-CCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHHHHH
Confidence 68888877775 66 69998665532 345555554211111111111222 4699999876443 24578888
Q ss_pred hccCCCEEEEEccC
Q 017901 257 FLKRGGHYMTLHGE 270 (364)
Q Consensus 257 ~l~~~G~~v~~g~~ 270 (364)
.++|+|++++-|..
T Consensus 252 ~lkpgg~lIlSGIl 265 (300)
T COG2264 252 LLKPGGRLILSGIL 265 (300)
T ss_pred HcCCCceEEEEeeh
Confidence 99999999999975
No 231
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.20 E-value=0.025 Score=49.89 Aligned_cols=74 Identities=16% Similarity=0.240 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HHHHHcCCce---eeeCCChh-H---HHHhc---CCccE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAEQ---AVDYSSKD-I---ELAIK---GKFDA 240 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~~~~g~~~---v~~~~~~~-~---~~~i~---g~~D~ 240 (364)
.+++++|+|+++++|.++++.+...|++|+.+.+++.. +.+.+.+... ..|..+.+ . .+.+. |++|+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47899999999999999999999999999988664322 2344444331 22443332 2 22221 56999
Q ss_pred EEECCCC
Q 017901 241 VLDTIGA 247 (364)
Q Consensus 241 vid~~g~ 247 (364)
++.+.|.
T Consensus 87 lv~~ag~ 93 (251)
T PRK12481 87 LINNAGI 93 (251)
T ss_pred EEECCCc
Confidence 9999884
No 232
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.20 E-value=0.0084 Score=57.83 Aligned_cols=92 Identities=21% Similarity=0.152 Sum_probs=61.3
Q ss_pred hcccCCCCEEE----EEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCc-eeeeCCChhHHHHhcCCccEEE
Q 017901 169 AARMSEGQRLL----VLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAE-QAVDYSSKDIELAIKGKFDAVL 242 (364)
Q Consensus 169 ~~~~~~g~~vl----i~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~-~v~~~~~~~~~~~i~g~~D~vi 242 (364)
..++++|+.++ ++||.|++|.+++|+++..|++|+++.+.... ...+..+.+ .++|.+.....+.+.. .
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~-~---- 102 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGITDPADLKA-L---- 102 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCCCCHHHHHH-H----
Confidence 45678888888 88889999999999999999999998655442 222223333 2444433222222221 0
Q ss_pred ECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 243 DTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 243 d~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
...+...++.|.++|+++.++..
T Consensus 103 -----~~~~~~~l~~l~~~griv~i~s~ 125 (450)
T PRK08261 103 -----YEFFHPVLRSLAPCGRVVVLGRP 125 (450)
T ss_pred -----HHHHHHHHHhccCCCEEEEEccc
Confidence 02456778888999999998865
No 233
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.20 E-value=0.032 Score=49.41 Aligned_cols=74 Identities=30% Similarity=0.339 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHH-cCCc-ee--eeCCCh-hH---HHHhc---CCccEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLA-AGAE-QA--VDYSSK-DI---ELAIK---GKFDAV 241 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~-~g~~-~v--~~~~~~-~~---~~~i~---g~~D~v 241 (364)
.+++++|+||+|++|..+++.+...|++|+.+.++.+. +.+.+ .+.. .. .|..+. +. .+.+. +++|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46899999999999999999999999999998876553 33322 2321 11 233332 12 22221 458999
Q ss_pred EECCCC
Q 017901 242 LDTIGA 247 (364)
Q Consensus 242 id~~g~ 247 (364)
|.+.|.
T Consensus 84 i~~Ag~ 89 (262)
T TIGR03325 84 IPNAGI 89 (262)
T ss_pred EECCCC
Confidence 999873
No 234
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.029 Score=48.70 Aligned_cols=74 Identities=22% Similarity=0.358 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHH---HcCCce-eeeCCCh-hH---HHHhc---CCccE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVL---AAGAEQ-AVDYSSK-DI---ELAIK---GKFDA 240 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~---~~g~~~-v~~~~~~-~~---~~~i~---g~~D~ 240 (364)
++++++|+|++|.+|..+++.+...|++|+++.++... +.+. ..+... ..|..+. ++ .+.+. +++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 47899999999999999999998889999999886543 2222 223321 1233332 22 22221 45999
Q ss_pred EEECCCC
Q 017901 241 VLDTIGA 247 (364)
Q Consensus 241 vid~~g~ 247 (364)
+|.+.|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9999874
No 235
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.17 E-value=0.029 Score=49.47 Aligned_cols=97 Identities=21% Similarity=0.304 Sum_probs=63.3
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce--e--eeCCCh----hHHHHhc---CCcc
Q 017901 174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ--A--VDYSSK----DIELAIK---GKFD 239 (364)
Q Consensus 174 ~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~--v--~~~~~~----~~~~~i~---g~~D 239 (364)
.|++++|+||+ +++|.++++.+...|++|+.+.++++. +.+.++.... . .|..+. .+.+.+. |++|
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 85 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID 85 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 57899999988 799999999999999999998776543 3333332211 1 233332 2222332 5699
Q ss_pred EEEECCCCch-----------------------------hHHHHHhhccCCCEEEEEccC
Q 017901 240 AVLDTIGAPE-----------------------------TERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 240 ~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~~ 270 (364)
+++.+.|... ..+.++..++.+|+++.++..
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~ 145 (252)
T PRK06079 86 GIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYF 145 (252)
T ss_pred EEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEecc
Confidence 9999987420 023445667778998887754
No 236
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.022 Score=50.71 Aligned_cols=73 Identities=21% Similarity=0.366 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCce-eeeCCCh-hHHHHhc------CCccEEEECC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQ-AVDYSSK-DIELAIK------GKFDAVLDTI 245 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~-v~~~~~~-~~~~~i~------g~~D~vid~~ 245 (364)
.+++++|+||+|.+|..+++.+...|++|+++.++...... ..+... ..|..+. ++...+. |++|++|.+.
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~a 81 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-IPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNA 81 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 35689999999999999999998999999999886543111 112221 2344333 2222221 4589999999
Q ss_pred CC
Q 017901 246 GA 247 (364)
Q Consensus 246 g~ 247 (364)
|.
T Consensus 82 g~ 83 (270)
T PRK06179 82 GV 83 (270)
T ss_pred CC
Confidence 85
No 237
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.15 E-value=0.055 Score=48.37 Aligned_cols=97 Identities=18% Similarity=0.311 Sum_probs=72.0
Q ss_pred ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901 153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL 232 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 232 (364)
+..||+....+..|....---.|++++|.|.+..+|.=+..++...+++|+.+.+. +.++.+
T Consensus 138 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~------------------T~~l~~ 199 (294)
T PRK14187 138 CLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSA------------------TRDLAD 199 (294)
T ss_pred CccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCC------------------CCCHHH
Confidence 34567666666666443333579999999999999999999999999999876432 122333
Q ss_pred HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.++. +|+++-++|.+..+ --+++++|..+|.+|..
T Consensus 200 ~~~~-ADIvVsAvGkp~~i--~~~~ik~gaiVIDVGin 234 (294)
T PRK14187 200 YCSK-ADILVAAVGIPNFV--KYSWIKKGAIVIDVGIN 234 (294)
T ss_pred HHhh-CCEEEEccCCcCcc--CHHHcCCCCEEEEeccc
Confidence 4444 99999999998443 36789999999999965
No 238
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.029 Score=49.61 Aligned_cols=74 Identities=22% Similarity=0.318 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc-----CCc-e--eeeCCCh-hH---HHHhc---C
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA-----GAE-Q--AVDYSSK-DI---ELAIK---G 236 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~-----g~~-~--v~~~~~~-~~---~~~i~---g 236 (364)
.+++++|+|+++++|..+++.+...|++|+.+.++++. +...++ +.. . ..|..+. ++ .+.+. |
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 46889999999999999999999999999998876553 222222 221 1 1233333 22 22221 4
Q ss_pred CccEEEECCCC
Q 017901 237 KFDAVLDTIGA 247 (364)
Q Consensus 237 ~~D~vid~~g~ 247 (364)
++|++|.+.|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 59999999884
No 239
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.15 E-value=0.012 Score=44.14 Aligned_cols=88 Identities=20% Similarity=0.359 Sum_probs=58.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHH
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERL 253 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~ 253 (364)
.|.+|+|.| +|.+|..-++.+...|++|+.+.... .... +- +......+.+.+.+ +|+||.+++.+..-..
T Consensus 6 ~~~~vlVvG-gG~va~~k~~~Ll~~gA~v~vis~~~--~~~~--~~---i~~~~~~~~~~l~~-~~lV~~at~d~~~n~~ 76 (103)
T PF13241_consen 6 KGKRVLVVG-GGPVAARKARLLLEAGAKVTVISPEI--EFSE--GL---IQLIRREFEEDLDG-ADLVFAATDDPELNEA 76 (103)
T ss_dssp TT-EEEEEE-ESHHHHHHHHHHCCCTBEEEEEESSE--HHHH--TS---CEEEESS-GGGCTT-ESEEEE-SS-HHHHHH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCch--hhhh--hH---HHHHhhhHHHHHhh-heEEEecCCCHHHHHH
Confidence 578899999 79999999999999999999997775 1111 11 11112233334446 9999999999855556
Q ss_pred HHhhccCCCEEEEEccC
Q 017901 254 GLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 254 ~~~~l~~~G~~v~~g~~ 270 (364)
.....+..|.++.....
T Consensus 77 i~~~a~~~~i~vn~~D~ 93 (103)
T PF13241_consen 77 IYADARARGILVNVVDD 93 (103)
T ss_dssp HHHHHHHTTSEEEETT-
T ss_pred HHHHHhhCCEEEEECCC
Confidence 66666668888887653
No 240
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.14 E-value=0.067 Score=47.35 Aligned_cols=97 Identities=21% Similarity=0.297 Sum_probs=61.7
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCcc----H-HHHHHc-CCc-e--eeeCCChh----HHHHhc---
Q 017901 174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKS----I-DRVLAA-GAE-Q--AVDYSSKD----IELAIK--- 235 (364)
Q Consensus 174 ~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~----~-~~~~~~-g~~-~--v~~~~~~~----~~~~i~--- 235 (364)
.|++++|+||+ +++|.++++.+...|++|+.+.++++ . +...++ +.. . ..|..+.+ +.+.+.
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 47899999986 79999999999999999998865432 1 222333 211 1 23433332 222222
Q ss_pred CCccEEEECCCCch------h-----------------------HHHHHhhccCCCEEEEEccC
Q 017901 236 GKFDAVLDTIGAPE------T-----------------------ERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 236 g~~D~vid~~g~~~------~-----------------------~~~~~~~l~~~G~~v~~g~~ 270 (364)
|++|+++.|.|... . .+.+++.++++|++|.++..
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~ 149 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYL 149 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEccc
Confidence 66999999887310 0 13445566778999988754
No 241
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.031 Score=49.56 Aligned_cols=74 Identities=24% Similarity=0.357 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HH---HHcCCc-ee--eeCCChhHH----HHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RV---LAAGAE-QA--VDYSSKDIE----LAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~---~~~g~~-~v--~~~~~~~~~----~~i~---g~~ 238 (364)
++.+++|+|++|.+|..+++.+...|++|+.+.++.+. + .. ...+.. .+ .|.++.+.. +.+. +++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999999886543 2 22 222322 12 344443222 2221 459
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 89 d~vi~~Ag~ 97 (263)
T PRK07814 89 DIVVNNVGG 97 (263)
T ss_pred CEEEECCCC
Confidence 999999874
No 242
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.12 E-value=0.041 Score=47.85 Aligned_cols=73 Identities=22% Similarity=0.323 Sum_probs=50.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce-eeeCCCh-h---HHHHhc---CCccEEEEC
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-AVDYSSK-D---IELAIK---GKFDAVLDT 244 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~-v~~~~~~-~---~~~~i~---g~~D~vid~ 244 (364)
+++++|+|+++++|..+++.+...|++|+.+.++... +.++..++.. ..|..+. + +.+.+. +++|+++.+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 4689999999999999999999999999999876543 3444555421 1233332 1 222222 459999999
Q ss_pred CCC
Q 017901 245 IGA 247 (364)
Q Consensus 245 ~g~ 247 (364)
.|.
T Consensus 82 ag~ 84 (236)
T PRK06483 82 ASD 84 (236)
T ss_pred Ccc
Confidence 874
No 243
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.11 E-value=0.071 Score=47.38 Aligned_cols=96 Identities=14% Similarity=0.209 Sum_probs=71.0
Q ss_pred ccccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHH
Q 017901 153 SAIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIE 231 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 231 (364)
...||+....+..|.. .++ -.|.+++|.|.+..+|.-+..++...|++|+...+.. .++.
T Consensus 130 ~~~PcTp~av~~ll~~-~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t------------------~~L~ 190 (279)
T PRK14178 130 GFAPCTPNGIMTLLHE-YKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKT------------------ENLK 190 (279)
T ss_pred CCCCCCHHHHHHHHHH-cCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecCh------------------hHHH
Confidence 3457766666666643 343 4789999999888999999999999999988875432 2344
Q ss_pred HHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 232 ~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
+.++. +|++|.++|.+..+. -+++++|..++.+|..
T Consensus 191 ~~~~~-ADIvI~Avgk~~lv~--~~~vk~GavVIDVgi~ 226 (279)
T PRK14178 191 AELRQ-ADILVSAAGKAGFIT--PDMVKPGATVIDVGIN 226 (279)
T ss_pred HHHhh-CCEEEECCCcccccC--HHHcCCCcEEEEeecc
Confidence 45555 999999999764443 3458999999999965
No 244
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.039 Score=49.39 Aligned_cols=74 Identities=23% Similarity=0.298 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHc-CCc-e--eeeCCChh-HHHHhc------CCccEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAA-GAE-Q--AVDYSSKD-IELAIK------GKFDAV 241 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~-g~~-~--v~~~~~~~-~~~~i~------g~~D~v 241 (364)
.+++++|+|++|.+|..+++.+...|++|+++.++.+. +.+.+. +.. . ..|..+.+ +...+. +++|++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 35789999999999999999999999999999887654 333332 211 1 22443332 222111 458999
Q ss_pred EECCCC
Q 017901 242 LDTIGA 247 (364)
Q Consensus 242 id~~g~ 247 (364)
|.+.|.
T Consensus 83 v~~ag~ 88 (277)
T PRK06180 83 VNNAGY 88 (277)
T ss_pred EECCCc
Confidence 999886
No 245
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.029 Score=49.89 Aligned_cols=74 Identities=22% Similarity=0.387 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce---eeeCCChh-HH---HHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ---AVDYSSKD-IE---LAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~---v~~~~~~~-~~---~~i~---g~~ 238 (364)
++++++|+|++|.+|..+++.+...|++|+.+.++.+. .. +.+.+... .+|..+.+ +. +.+. +++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999999876543 21 22233221 23443332 22 2221 448
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 88 D~vi~~ag~ 96 (264)
T PRK07576 88 DVLVSGAAG 96 (264)
T ss_pred CEEEECCCC
Confidence 999998863
No 246
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.028 Score=50.87 Aligned_cols=74 Identities=27% Similarity=0.474 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCc-ee--eeCCChh-H---HHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QA--VDYSSKD-I---ELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~-~v--~~~~~~~-~---~~~i~---g~~ 238 (364)
.+++++|+||+|++|...++.+...|++|+++.++.+. +. +.+.+.. .. .|..+.+ + .+.+. |++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 35789999999999999999998899999999887643 22 2223322 12 2333332 2 22221 459
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.|.|.
T Consensus 119 d~li~~AG~ 127 (293)
T PRK05866 119 DILINNAGR 127 (293)
T ss_pred CEEEECCCC
Confidence 999999885
No 247
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.035 Score=48.93 Aligned_cols=75 Identities=24% Similarity=0.359 Sum_probs=50.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH----HHcCCc-eee--eCCCh-hHHHHhc------CC
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAE-QAV--DYSSK-DIELAIK------GK 237 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~----~~~g~~-~v~--~~~~~-~~~~~i~------g~ 237 (364)
-.+++++|+|++|.+|..+++.+...|++|+++.++.+. +.+ +..+.. +++ |..+. ++...+. ++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 357899999999999999999999999999999887553 222 222221 222 33332 2222211 45
Q ss_pred ccEEEECCCC
Q 017901 238 FDAVLDTIGA 247 (364)
Q Consensus 238 ~D~vid~~g~ 247 (364)
+|++|.+.|.
T Consensus 87 ~d~li~~ag~ 96 (258)
T PRK06949 87 IDILVNNSGV 96 (258)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 248
>PRK05717 oxidoreductase; Validated
Probab=96.08 E-value=0.044 Score=48.30 Aligned_cols=74 Identities=20% Similarity=0.323 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc-e--eeeCCChh-H---HHHhc---CCccEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-Q--AVDYSSKD-I---ELAIK---GKFDAV 241 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~-~--v~~~~~~~-~---~~~i~---g~~D~v 241 (364)
.|++++|+|++|.+|..++..+...|++|+.+.++... +...+++.. . ..|..+.+ + .+.+. |++|++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 88 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL 88 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 46889999999999999999999999999998765443 333444422 1 22333322 2 22222 558999
Q ss_pred EECCCC
Q 017901 242 LDTIGA 247 (364)
Q Consensus 242 id~~g~ 247 (364)
|.+.|.
T Consensus 89 i~~ag~ 94 (255)
T PRK05717 89 VCNAAI 94 (255)
T ss_pred EECCCc
Confidence 999884
No 249
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.07 E-value=0.069 Score=47.29 Aligned_cols=74 Identities=16% Similarity=0.299 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHc--CCc-ee--eeCCChh----HHHHhc--CCccE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAA--GAE-QA--VDYSSKD----IELAIK--GKFDA 240 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~--g~~-~v--~~~~~~~----~~~~i~--g~~D~ 240 (364)
++.+++|+||+|.+|..+++.+...|++|+++.++++. + ...++ +.. .. .|..+.+ +.+.+. +++|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 46789999999999999999999999999999887653 2 22222 111 12 2333321 112221 45899
Q ss_pred EEECCCC
Q 017901 241 VLDTIGA 247 (364)
Q Consensus 241 vid~~g~ 247 (364)
+|.+.|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9999885
No 250
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.07 E-value=0.054 Score=43.76 Aligned_cols=94 Identities=18% Similarity=0.189 Sum_probs=59.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE 249 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~ 249 (364)
..+.+++|.| .|.+|...++.+...| .+|+.+.++.+. +.+.+++... +.....+..+.+.+ +|+|+.|++...
T Consensus 17 ~~~~~i~iiG-~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~Dvvi~~~~~~~ 93 (155)
T cd01065 17 LKGKKVLILG-AGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAYLDLEELLAE-ADLIINTTPVGM 93 (155)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceeecchhhcccc-CCEEEeCcCCCC
Confidence 4578899999 6999999999988886 577777766543 3455555421 00111122223445 999999998863
Q ss_pred h----HHHHHhhccCCCEEEEEcc
Q 017901 250 T----ERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 250 ~----~~~~~~~l~~~G~~v~~g~ 269 (364)
. .......++++..++.++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~v~D~~~ 117 (155)
T cd01065 94 KPGDELPLPPSLLKPGGVVYDVVY 117 (155)
T ss_pred CCCCCCCCCHHHcCCCCEEEEcCc
Confidence 2 1222345677777777754
No 251
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.06 E-value=0.043 Score=48.64 Aligned_cols=74 Identities=20% Similarity=0.326 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCc--eeeeCCCh-h---HHHHhc---CCcc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAE--QAVDYSSK-D---IELAIK---GKFD 239 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~--~v~~~~~~-~---~~~~i~---g~~D 239 (364)
.|+.|||+||++++|.+.++-...+|++++....+.+- +..++.|-. .+.|.++. + .++.++ |.+|
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ 116 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVD 116 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCce
Confidence 58999999999999999888888889987777554431 445665522 23444443 2 333343 6699
Q ss_pred EEEECCCC
Q 017901 240 AVLDTIGA 247 (364)
Q Consensus 240 ~vid~~g~ 247 (364)
+++++.|-
T Consensus 117 ILVNNAGI 124 (300)
T KOG1201|consen 117 ILVNNAGI 124 (300)
T ss_pred EEEecccc
Confidence 99999884
No 252
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.06 E-value=0.093 Score=46.12 Aligned_cols=74 Identities=20% Similarity=0.303 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCc-e--eeeCCChh-HH---HHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAE-Q--AVDYSSKD-IE---LAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~-~--v~~~~~~~-~~---~~i~---g~~ 238 (364)
.+++++|+|++|.+|..+++.+...|++|+.+.++... .. +...+.. + ..|..+.+ +. +.+. +++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 35789999999999999999999999999999886553 22 2222322 1 22333332 21 2221 349
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999999874
No 253
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.06 E-value=0.034 Score=49.29 Aligned_cols=74 Identities=23% Similarity=0.424 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-H---HHHc--CCc---eeeeCCChh----HHHHhc---C
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAA--GAE---QAVDYSSKD----IELAIK---G 236 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~---~~~~--g~~---~v~~~~~~~----~~~~i~---g 236 (364)
.+++++|+||++++|...++.+...|++|+.+.++.+. + . +.+. +.. ...|..+.+ +.+.+. |
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 47899999999999999999999999999999886543 2 1 2222 111 122443332 222222 5
Q ss_pred CccEEEECCCC
Q 017901 237 KFDAVLDTIGA 247 (364)
Q Consensus 237 ~~D~vid~~g~ 247 (364)
++|++|.+.|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 59999999984
No 254
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.06 E-value=0.046 Score=47.93 Aligned_cols=74 Identities=18% Similarity=0.366 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H---HHHHcCCce---eeeCCCh-hH---HHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D---RVLAAGAEQ---AVDYSSK-DI---ELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~---~~~~~g~~~---v~~~~~~-~~---~~~i~---g~~ 238 (364)
++++++|+|++|.+|..+++.+...|++|+.+.++... . .++..+... ..|..+. +. .+.+. +++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999988876543 2 223334331 2233332 21 22221 448
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 84 d~vi~~ag~ 92 (253)
T PRK08217 84 NGLINNAGI 92 (253)
T ss_pred CEEEECCCc
Confidence 999999883
No 255
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.06 E-value=0.072 Score=47.50 Aligned_cols=96 Identities=17% Similarity=0.277 Sum_probs=70.3
Q ss_pred cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHH
Q 017901 154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA 233 (364)
Q Consensus 154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 233 (364)
..||+....+..|....---.|++++|.|.+..+|.=+..++...+++|+.+-+. +.++.+.
T Consensus 138 ~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~------------------T~~L~~~ 199 (288)
T PRK14171 138 FIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSK------------------THNLSSI 199 (288)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC------------------CCCHHHH
Confidence 4566666666656433223478999999999999999999999999998865321 2233444
Q ss_pred hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
++. +|+++-++|.+..+. -+++++|..++.+|..
T Consensus 200 ~~~-ADIvV~AvGkp~~i~--~~~vk~GavVIDvGin 233 (288)
T PRK14171 200 TSK-ADIVVAAIGSPLKLT--AEYFNPESIVIDVGIN 233 (288)
T ss_pred Hhh-CCEEEEccCCCCccC--HHHcCCCCEEEEeecc
Confidence 444 999999999874333 5789999999999965
No 256
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.04 E-value=0.078 Score=47.14 Aligned_cols=96 Identities=20% Similarity=0.247 Sum_probs=70.8
Q ss_pred cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHH
Q 017901 154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA 233 (364)
Q Consensus 154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 233 (364)
..||+.......|....---.|++++|.|.+..+|.=+..++...+++|+.+.+. +.++.+.
T Consensus 136 ~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~------------------T~nl~~~ 197 (282)
T PRK14182 136 PRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSR------------------TADLAGE 197 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC------------------CCCHHHH
Confidence 4577666666666433223479999999999999999999999999988876322 2233444
Q ss_pred hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
++. +|+++-++|.+..+ --+++++|..++.+|..
T Consensus 198 ~~~-ADIvI~AvGk~~~i--~~~~ik~gaiVIDvGin 231 (282)
T PRK14182 198 VGR-ADILVAAIGKAELV--KGAWVKEGAVVIDVGMN 231 (282)
T ss_pred Hhh-CCEEEEecCCcCcc--CHHHcCCCCEEEEeece
Confidence 444 99999999987443 35789999999999965
No 257
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.068 Score=47.74 Aligned_cols=73 Identities=18% Similarity=0.272 Sum_probs=48.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH-HHcCCc-ee--eeCCCh-hH---HHHhc---CCccEEE
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV-LAAGAE-QA--VDYSSK-DI---ELAIK---GKFDAVL 242 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~-~~~g~~-~v--~~~~~~-~~---~~~i~---g~~D~vi 242 (364)
+.+++|+|++|.+|..+++.+...|++|+.+.++.+. +.+ ..++.. .. .|..+. ++ .+.+. +++|++|
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999999999999999998889999999887654 322 222221 12 233332 22 12221 4589999
Q ss_pred ECCCC
Q 017901 243 DTIGA 247 (364)
Q Consensus 243 d~~g~ 247 (364)
.|.|.
T Consensus 83 ~~ag~ 87 (275)
T PRK08263 83 NNAGY 87 (275)
T ss_pred ECCCC
Confidence 99885
No 258
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.01 E-value=0.049 Score=46.34 Aligned_cols=89 Identities=13% Similarity=0.159 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHH--HHHHcCCceeeeCCChhH-HHHhcCCccEEEECCCCchh
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSID--RVLAAGAEQAVDYSSKDI-ELAIKGKFDAVLDTIGAPET 250 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~--~~~~~g~~~v~~~~~~~~-~~~i~g~~D~vid~~g~~~~ 250 (364)
.|.+|+|.| +|.+|...++.+...|++|+.+...-..+ .+.+.+.- .+.. ..+ ...+.+ +|+||-|++.+ .
T Consensus 9 ~~k~vLVIG-gG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i-~~~~--~~~~~~~l~~-adlViaaT~d~-e 82 (202)
T PRK06718 9 SNKRVVIVG-GGKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKI-RWKQ--KEFEPSDIVD-AFLVIAATNDP-R 82 (202)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCE-EEEe--cCCChhhcCC-ceEEEEcCCCH-H
Confidence 568999999 79999999998888999988885432222 22222211 1111 111 122335 99999999998 5
Q ss_pred HHHHHhhccCCCEEEEEc
Q 017901 251 ERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 251 ~~~~~~~l~~~G~~v~~g 268 (364)
++..+...+..+.++...
T Consensus 83 lN~~i~~~a~~~~lvn~~ 100 (202)
T PRK06718 83 VNEQVKEDLPENALFNVI 100 (202)
T ss_pred HHHHHHHHHHhCCcEEEC
Confidence 555554444445565554
No 259
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.01 E-value=0.073 Score=47.60 Aligned_cols=97 Identities=20% Similarity=0.307 Sum_probs=70.7
Q ss_pred ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHc----CCeEEEeeCCccHHHHHHcCCceeeeCCCh
Q 017901 153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS----GCHVSATCGSKSIDRVLAAGAEQAVDYSSK 228 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~----g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~ 228 (364)
+..||+....+..|....---.|++++|.|.+..+|.=+..++... +++|+.+-+. +.
T Consensus 135 ~~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~------------------T~ 196 (293)
T PRK14185 135 CFVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSR------------------SK 196 (293)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCC------------------CC
Confidence 3457776666666643322347999999999999999999999887 5777765322 22
Q ss_pred hHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 229 DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 229 ~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
++.+.++. +|+++-++|.+..+. -+++++|..++.+|..
T Consensus 197 nl~~~~~~-ADIvIsAvGkp~~i~--~~~vk~gavVIDvGin 235 (293)
T PRK14185 197 NLKKECLE-ADIIIAALGQPEFVK--ADMVKEGAVVIDVGTT 235 (293)
T ss_pred CHHHHHhh-CCEEEEccCCcCccC--HHHcCCCCEEEEecCc
Confidence 34444444 999999999985543 5899999999999965
No 260
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.00 E-value=0.044 Score=48.97 Aligned_cols=74 Identities=22% Similarity=0.371 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCcee--eeCCChh----HHHHhc---CC
Q 017901 174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQA--VDYSSKD----IELAIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~~g--~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~v--~~~~~~~----~~~~i~---g~ 237 (364)
.++++||+|+++ ++|.++++.+...|++|+.+.++++. +...+.|.... .|..+.+ +.+.+. |+
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 468899999876 99999999999999999988765432 22234453322 2433332 222222 56
Q ss_pred ccEEEECCCC
Q 017901 238 FDAVLDTIGA 247 (364)
Q Consensus 238 ~D~vid~~g~ 247 (364)
+|+++++.|.
T Consensus 86 iD~lVnnAG~ 95 (271)
T PRK06505 86 LDFVVHAIGF 95 (271)
T ss_pred CCEEEECCcc
Confidence 9999999884
No 261
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.98 E-value=0.041 Score=48.18 Aligned_cols=74 Identities=23% Similarity=0.306 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HHHHHcCCc-ee--eeCCCh-hHH---HHhc---CCccE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAE-QA--VDYSSK-DIE---LAIK---GKFDA 240 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~~~~g~~-~v--~~~~~~-~~~---~~i~---g~~D~ 240 (364)
.+++++|+|++|.+|..+++.+...|++|+.+.++... +.+.+.+.. .. .|..+. ++. +.+. +++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47899999999999999999999999999999876422 333444432 12 233333 222 2221 45999
Q ss_pred EEECCCC
Q 017901 241 VLDTIGA 247 (364)
Q Consensus 241 vid~~g~ 247 (364)
+|.+.|.
T Consensus 84 li~~ag~ 90 (248)
T TIGR01832 84 LVNNAGI 90 (248)
T ss_pred EEECCCC
Confidence 9999875
No 262
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.033 Score=50.93 Aligned_cols=74 Identities=20% Similarity=0.338 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHH---Hc--CCc-ee--eeCCCh----hHHHHhc---C
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVL---AA--GAE-QA--VDYSSK----DIELAIK---G 236 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~---~~--g~~-~v--~~~~~~----~~~~~i~---g 236 (364)
.|++++|+||++++|..+++.+...|++|+.++++.+. +.+. +. +.. .. +|..+. .+.+.+. +
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999999999999887653 2222 21 111 11 233332 2233332 4
Q ss_pred CccEEEECCCC
Q 017901 237 KFDAVLDTIGA 247 (364)
Q Consensus 237 ~~D~vid~~g~ 247 (364)
++|++|.+.|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 59999998874
No 263
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.98 E-value=0.077 Score=47.16 Aligned_cols=96 Identities=19% Similarity=0.286 Sum_probs=69.7
Q ss_pred ccccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHH
Q 017901 153 SAIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIE 231 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~ 231 (364)
...||+....+..|. ..++ -.|++++|.|.+..+|.=.+.++...|++|+.+ .+.. .++.
T Consensus 135 ~~~PcTp~avi~lL~-~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~-hs~T-----------------~~l~ 195 (281)
T PRK14183 135 GFVPCTPLGVMELLE-EYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDIC-HIFT-----------------KDLK 195 (281)
T ss_pred CCCCCcHHHHHHHHH-HcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEe-CCCC-----------------cCHH
Confidence 345666666666553 3343 479999999988899999999999999999754 2211 1223
Q ss_pred HHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 232 LAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 232 ~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
+.++. +|+++-++|.+..+ --+++++|..++.+|..
T Consensus 196 ~~~~~-ADIvV~AvGkp~~i--~~~~vk~gavvIDvGin 231 (281)
T PRK14183 196 AHTKK-ADIVIVGVGKPNLI--TEDMVKEGAIVIDIGIN 231 (281)
T ss_pred HHHhh-CCEEEEecCccccc--CHHHcCCCcEEEEeecc
Confidence 33444 99999999998443 36789999999999964
No 264
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.039 Score=48.58 Aligned_cols=74 Identities=19% Similarity=0.297 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HH---HHcCCce---eeeCCChh-H---HHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RV---LAAGAEQ---AVDYSSKD-I---ELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~---~~~g~~~---v~~~~~~~-~---~~~i~---g~~ 238 (364)
.+++++|+|+++++|..+++.+...|++|+.+.++.+. + .. ...+... ..|..+.+ + .+.+. |++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 47899999999999999999999999999998876543 2 22 2223221 23333332 2 22221 569
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|+++.+.|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999999874
No 265
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=95.95 E-value=0.069 Score=48.91 Aligned_cols=96 Identities=19% Similarity=0.277 Sum_probs=70.8
Q ss_pred cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHH
Q 017901 154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELA 233 (364)
Q Consensus 154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 233 (364)
..||+.......|....---.|++++|.|.+..+|.=+..++...+++|+.+.+. +.++.+.
T Consensus 210 f~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~------------------T~nl~~~ 271 (364)
T PLN02616 210 FVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSR------------------TKNPEEI 271 (364)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCC------------------CCCHHHH
Confidence 4566666666655433222479999999999999999999999999988876322 2233444
Q ss_pred hcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 234 IKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 234 i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
++. +|+++-++|.+.. ---+++++|..+|.+|..
T Consensus 272 ~r~-ADIVIsAvGkp~~--i~~d~vK~GAvVIDVGIn 305 (364)
T PLN02616 272 TRE-ADIIISAVGQPNM--VRGSWIKPGAVVIDVGIN 305 (364)
T ss_pred Hhh-CCEEEEcCCCcCc--CCHHHcCCCCEEEecccc
Confidence 444 9999999999844 336789999999999965
No 266
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=95.94 E-value=0.075 Score=50.41 Aligned_cols=73 Identities=15% Similarity=0.162 Sum_probs=51.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE 249 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~ 249 (364)
-.+.+++|.| +|.+|.+++..+...|+ +++.+.|+.++ .++.+++...++.+ .++.+.+.. +|+||.|++.+.
T Consensus 179 l~~kkvlviG-aG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~--~~l~~~l~~-aDiVI~aT~a~~ 254 (414)
T PRK13940 179 ISSKNVLIIG-AGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL--SELPQLIKK-ADIIIAAVNVLE 254 (414)
T ss_pred ccCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH--HHHHHHhcc-CCEEEECcCCCC
Confidence 4678999999 79999999999999997 56666666554 45566652223322 234444545 999999999973
No 267
>PRK06194 hypothetical protein; Provisional
Probab=95.92 E-value=0.044 Score=49.26 Aligned_cols=73 Identities=25% Similarity=0.361 Sum_probs=48.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHH---HcCCce-ee--eCCCh-hHHH---Hhc---CCcc
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVL---AAGAEQ-AV--DYSSK-DIEL---AIK---GKFD 239 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~---~~g~~~-v~--~~~~~-~~~~---~i~---g~~D 239 (364)
+.++||+||+|.+|..+++.+...|++|+.+.++.+. +... ..+... ++ |..+. ++.. .+. |++|
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id 85 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH 85 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999999999999999999999988776442 2222 223321 12 33332 2222 221 4589
Q ss_pred EEEECCCC
Q 017901 240 AVLDTIGA 247 (364)
Q Consensus 240 ~vid~~g~ 247 (364)
++|.+.|.
T Consensus 86 ~vi~~Ag~ 93 (287)
T PRK06194 86 LLFNNAGV 93 (287)
T ss_pred EEEECCCC
Confidence 99999986
No 268
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=95.91 E-value=0.076 Score=45.68 Aligned_cols=98 Identities=16% Similarity=0.231 Sum_probs=63.6
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-H----HHHHcCCce--eeeCCChhHHHHhcCCc
Q 017901 168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-D----RVLAAGAEQ--AVDYSSKDIELAIKGKF 238 (364)
Q Consensus 168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-~----~~~~~g~~~--v~~~~~~~~~~~i~g~~ 238 (364)
+...++++++||-.| ++.|..++.+++..+. +|+++..+++. + .+.+.|.+. ++..+..+..... +++
T Consensus 71 ~~l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~~~~-~~f 147 (215)
T TIGR00080 71 ELLELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGWEPL-APY 147 (215)
T ss_pred HHhCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCCccc-CCC
Confidence 556789999999998 3468888888887654 69999776553 2 345556543 2222211111111 249
Q ss_pred cEEEECCCCchhHHHHHhhccCCCEEEEEc
Q 017901 239 DAVLDTIGAPETERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 239 D~vid~~g~~~~~~~~~~~l~~~G~~v~~g 268 (364)
|+|+-............+.|++||+++..-
T Consensus 148 D~Ii~~~~~~~~~~~~~~~L~~gG~lv~~~ 177 (215)
T TIGR00080 148 DRIYVTAAGPKIPEALIDQLKEGGILVMPV 177 (215)
T ss_pred CEEEEcCCcccccHHHHHhcCcCcEEEEEE
Confidence 998865554446678889999999988653
No 269
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.045 Score=48.19 Aligned_cols=74 Identities=22% Similarity=0.351 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-H---HHHcCCce-e--eeCCChh----HHHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAAGAEQ-A--VDYSSKD----IELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~---~~~~g~~~-v--~~~~~~~----~~~~i~---g~~ 238 (364)
.+++++|+|+++++|..+++.+...|++|+.+.++++. + . +++.+.+. . .|..+.+ +.+.+. +++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 46789999999999999999999999999999876543 2 2 23334321 2 2333322 222221 459
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999999884
No 270
>PRK08017 oxidoreductase; Provisional
Probab=95.90 E-value=0.055 Score=47.61 Aligned_cols=72 Identities=17% Similarity=0.282 Sum_probs=50.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCcee-eeCCChh----HHHHhc----CCccEEEECC
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQA-VDYSSKD----IELAIK----GKFDAVLDTI 245 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v-~~~~~~~----~~~~i~----g~~D~vid~~ 245 (364)
++++|+|++|.+|..+++.+...|++|+++.++.+. +.+++.++..+ .|..+.+ ..+.+. +++|.++.+.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a 82 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 579999999999999999999999999999887654 55566665432 3443322 122221 3478999887
Q ss_pred CC
Q 017901 246 GA 247 (364)
Q Consensus 246 g~ 247 (364)
|.
T Consensus 83 g~ 84 (256)
T PRK08017 83 GF 84 (256)
T ss_pred CC
Confidence 74
No 271
>PLN02253 xanthoxin dehydrogenase
Probab=95.90 E-value=0.056 Score=48.36 Aligned_cols=74 Identities=20% Similarity=0.301 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCC--c-e--eeeCCChh-HHH---Hhc---CCcc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGA--E-Q--AVDYSSKD-IEL---AIK---GKFD 239 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~--~-~--v~~~~~~~-~~~---~i~---g~~D 239 (364)
.+++++|+|++|.+|..+++.+...|++|+.+.+.++. +...+++. . . ..|..+.+ +.. .+. |++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 36789999999999999999988899999998776543 23333322 1 1 23443332 222 221 4599
Q ss_pred EEEECCCC
Q 017901 240 AVLDTIGA 247 (364)
Q Consensus 240 ~vid~~g~ 247 (364)
++|.+.|.
T Consensus 97 ~li~~Ag~ 104 (280)
T PLN02253 97 IMVNNAGL 104 (280)
T ss_pred EEEECCCc
Confidence 99999874
No 272
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.13 Score=44.76 Aligned_cols=97 Identities=22% Similarity=0.338 Sum_probs=61.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH------HHHHHcCCc-ee--eeCCCh-hHHH---Hhc---CC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI------DRVLAAGAE-QA--VDYSSK-DIEL---AIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~------~~~~~~g~~-~v--~~~~~~-~~~~---~i~---g~ 237 (364)
++.+++|+|++|.+|..+++.+...|++++.+.++... +.+...+.. .. .|..+. ++.+ .+. ++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999999999998887654321 122333322 12 233332 2222 221 45
Q ss_pred ccEEEECCCCch-------------------------hHHHHHhhccCCCEEEEEccC
Q 017901 238 FDAVLDTIGAPE-------------------------TERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 238 ~D~vid~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~ 270 (364)
+|++|.+.|... .++.+++.++.+|+++.++..
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~ 141 (245)
T PRK12937 84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTS 141 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeec
Confidence 999999988421 023445556677899988753
No 273
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.02 Score=50.67 Aligned_cols=72 Identities=31% Similarity=0.484 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCc-eeeeCCChh----HHHHhc---CCccEEEECC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSKD----IELAIK---GKFDAVLDTI 245 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~-~v~~~~~~~----~~~~i~---g~~D~vid~~ 245 (364)
.|++++|+|++|++|..+++.+...|++|+++.++...... .... ...|..+.+ +.+.+. +++|++|.+.
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a 85 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLP--EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVL 85 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhcC--CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 47899999999999999999999999999999876543210 0111 112333332 122221 4599999998
Q ss_pred CC
Q 017901 246 GA 247 (364)
Q Consensus 246 g~ 247 (364)
|.
T Consensus 86 g~ 87 (260)
T PRK06523 86 GG 87 (260)
T ss_pred cc
Confidence 83
No 274
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.89 E-value=0.037 Score=44.72 Aligned_cols=76 Identities=25% Similarity=0.361 Sum_probs=57.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCceeeeCCC----hhHHHHhc------CCccE
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQAVDYSS----KDIELAIK------GKFDA 240 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~v~~~~~----~~~~~~i~------g~~D~ 240 (364)
.+|-..+|+|+++++|.+++..+...|+.|+...-+..+ +.++++|-..++..-+ ++....+. |+.|+
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 356677999999999999999999999999988665554 7789999876665432 23322222 67999
Q ss_pred EEECCCCc
Q 017901 241 VLDTIGAP 248 (364)
Q Consensus 241 vid~~g~~ 248 (364)
.++|.|-.
T Consensus 87 ~vncagia 94 (260)
T KOG1199|consen 87 LVNCAGIA 94 (260)
T ss_pred eeecccee
Confidence 99999964
No 275
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.042 Score=49.24 Aligned_cols=74 Identities=20% Similarity=0.284 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce---eeeCCChh-H---HHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ---AVDYSSKD-I---ELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~---v~~~~~~~-~---~~~i~---g~~ 238 (364)
.+++++|+|++|++|..+++.+...|++|+.+.++... +. ++..+... ..|..+.+ + .+.+. |++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 47889999999999999999999999999988776542 22 22334321 12333322 2 22221 558
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 85 d~li~nAg~ 93 (275)
T PRK05876 85 DVVFSNAGI 93 (275)
T ss_pred CEEEECCCc
Confidence 999999884
No 276
>PRK08177 short chain dehydrogenase; Provisional
Probab=95.88 E-value=0.053 Score=46.81 Aligned_cols=72 Identities=18% Similarity=0.310 Sum_probs=48.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCcee--eeCCChh----HHHHhc-CCccEEEECCCC
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQA--VDYSSKD----IELAIK-GKFDAVLDTIGA 247 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v--~~~~~~~----~~~~i~-g~~D~vid~~g~ 247 (364)
++++|+|++|.+|...++.+...|++|+++.++... ..+.+++.... .|..+.+ +.+.+. +++|++|.+.|.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~ 81 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI 81 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence 479999999999999999998899999999887653 33444332222 2333322 233332 348999998864
No 277
>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.87 E-value=0.096 Score=46.70 Aligned_cols=97 Identities=15% Similarity=0.222 Sum_probs=70.7
Q ss_pred ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHc----CCeEEEeeCCccHHHHHHcCCceeeeCCCh
Q 017901 153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS----GCHVSATCGSKSIDRVLAAGAEQAVDYSSK 228 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~----g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~ 228 (364)
+..||+....+..|....---.|++++|.|.+..+|.=+..++... +++|+.+-+ .+.
T Consensus 131 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs------------------~T~ 192 (287)
T PRK14181 131 GFIPCTPAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHS------------------QSE 192 (287)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCC------------------CCC
Confidence 3457776666666644332346999999999999999999999887 677775422 222
Q ss_pred hHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 229 DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 229 ~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
++.+.++. +|+++-++|.+.. ---+++++|..++.+|..
T Consensus 193 ~l~~~~~~-ADIvV~AvG~p~~--i~~~~ik~GavVIDvGin 231 (287)
T PRK14181 193 NLTEILKT-ADIIIAAIGVPLF--IKEEMIAEKAVIVDVGTS 231 (287)
T ss_pred CHHHHHhh-CCEEEEccCCcCc--cCHHHcCCCCEEEEeccc
Confidence 34444444 9999999999843 346889999999999965
No 278
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=95.86 E-value=0.056 Score=51.14 Aligned_cols=73 Identities=16% Similarity=0.241 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHcCCc-ee--eeCCChh-HHHHhcCCccEEEECCCC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGAE-QA--VDYSSKD-IELAIKGKFDAVLDTIGA 247 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~g~~-~v--~~~~~~~-~~~~i~g~~D~vid~~g~ 247 (364)
.+++++|+||+|++|.+.++.+...|++|+++.++++. . .....+.. .. .|..+.+ +.+.+ +++|++|.+.|.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l-~~IDiLInnAGi 255 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELL-EKVDILIINHGI 255 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHh-CCCCEEEECCCc
Confidence 46899999999999999999998899999999876543 2 12211111 12 2434432 33333 349999998874
No 279
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.86 E-value=0.087 Score=46.94 Aligned_cols=95 Identities=15% Similarity=0.260 Sum_probs=70.7
Q ss_pred cccchHHHHHHHHHHhcccC-CCCEEEEEcCCchHHHHHHHHHHH--cCCeEEEeeCCccHHHHHHcCCceeeeCCChhH
Q 017901 154 AIPFAALTAWRALKCAARMS-EGQRLLVLGGGGAVGFAAVQFSVA--SGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDI 230 (364)
Q Consensus 154 ~~~~~~~ta~~~l~~~~~~~-~g~~vli~g~~g~~G~~~~~~a~~--~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~ 230 (364)
..||+....+..|. .-++. .|++++|.|.+..+|.=++.++.. .+++|+.+-+ .+.++
T Consensus 137 ~~PcTp~av~~ll~-~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs------------------~T~~l 197 (284)
T PRK14193 137 PLPCTPRGIVHLLR-RYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHT------------------GTRDL 197 (284)
T ss_pred CCCCCHHHHHHHHH-HhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCC------------------CCCCH
Confidence 45777766666663 44443 699999999999999999999987 6888876633 22334
Q ss_pred HHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 231 ELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 231 ~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.+.++. +|+++-++|.+.. ---+++++|..++.+|..
T Consensus 198 ~~~~k~-ADIvV~AvGkp~~--i~~~~ik~GavVIDvGin 234 (284)
T PRK14193 198 AAHTRR-ADIIVAAAGVAHL--VTADMVKPGAAVLDVGVS 234 (284)
T ss_pred HHHHHh-CCEEEEecCCcCc--cCHHHcCCCCEEEEcccc
Confidence 445554 9999999999843 336789999999999965
No 280
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.032 Score=49.11 Aligned_cols=73 Identities=26% Similarity=0.364 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCc-eeeeCCCh-hH---HHHhc---CCccEEEECC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSK-DI---ELAIK---GKFDAVLDTI 245 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~-~v~~~~~~-~~---~~~i~---g~~D~vid~~ 245 (364)
.+++++|+|++|++|..+++.+...|++|+.+.++.... .....+. ...|..+. ++ .+.+. +++|++|.+.
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~a 83 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNA 83 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 478999999999999999999999999999998765431 1111111 12233332 22 22221 4589999998
Q ss_pred CC
Q 017901 246 GA 247 (364)
Q Consensus 246 g~ 247 (364)
|.
T Consensus 84 g~ 85 (252)
T PRK07856 84 GG 85 (252)
T ss_pred CC
Confidence 74
No 281
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.85 E-value=0.058 Score=47.72 Aligned_cols=97 Identities=21% Similarity=0.266 Sum_probs=62.4
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCceee--eCCCh-h---HHHHhc---CC
Q 017901 174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQAV--DYSSK-D---IELAIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~v~--~~~~~-~---~~~~i~---g~ 237 (364)
.|++++|+||+ +++|.++++.+...|++|+.+.++++. +...+++....+ |..+. + +.+.+. |+
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 47899999987 489999999999999999888776432 222333432222 33332 2 222222 56
Q ss_pred ccEEEECCCCch--------------h---------------HHHHHhhccCCCEEEEEccC
Q 017901 238 FDAVLDTIGAPE--------------T---------------ERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 238 ~D~vid~~g~~~--------------~---------------~~~~~~~l~~~G~~v~~g~~ 270 (364)
+|+++.+.|... . .+.++..++.+|+++.++..
T Consensus 89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~ 150 (258)
T PRK07533 89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYY 150 (258)
T ss_pred CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecc
Confidence 999999987420 0 24556667778898877643
No 282
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.84 E-value=0.05 Score=47.93 Aligned_cols=74 Identities=23% Similarity=0.368 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce-e--eeCCChh-H---HHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ-A--VDYSSKD-I---ELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~-v--~~~~~~~-~---~~~i~---g~~ 238 (364)
.+++++|+|++|.+|..+++.+...|++|+.+.++++. +. +++.|... . .|..+.+ + .+.+. +++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 47899999999999999999998899999988876543 22 23333221 1 2433322 2 22221 458
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999985
No 283
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.84 E-value=0.04 Score=48.54 Aligned_cols=74 Identities=18% Similarity=0.231 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHH---HHcCCc---eeeeCCChh-HHH---Hhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRV---LAAGAE---QAVDYSSKD-IEL---AIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~---~~~g~~---~v~~~~~~~-~~~---~i~---g~~ 238 (364)
.+++++|+||+|.+|..+++.+...|++|+.+.+++.. +.. .+.+.. ...|..+.+ +.. .+. +++
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 56889999999999999999999999999999876543 222 222322 123333332 221 221 458
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 84 d~vi~~ag~ 92 (258)
T PRK07890 84 DALVNNAFR 92 (258)
T ss_pred cEEEECCcc
Confidence 999999874
No 284
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.84 E-value=0.052 Score=49.82 Aligned_cols=73 Identities=18% Similarity=0.281 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCC---c-ee--eeCCChh----HHHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGA---E-QA--VDYSSKD----IELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~---~-~v--~~~~~~~----~~~~i~---g~~ 238 (364)
.+++++|+||+|++|..+++.+...|++|+.++++.+. +...++.. . .. .|..+.+ +.+.+. +++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 46789999999999999999998899999999887653 23333321 1 11 2333322 222221 359
Q ss_pred cEEEECCC
Q 017901 239 DAVLDTIG 246 (364)
Q Consensus 239 D~vid~~g 246 (364)
|++|.+.|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999988
No 285
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.83 E-value=0.045 Score=48.34 Aligned_cols=74 Identities=20% Similarity=0.351 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHH----HHHHcCCc-e--eeeCCChh----HHHHhc---CCcc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSID----RVLAAGAE-Q--AVDYSSKD----IELAIK---GKFD 239 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~----~~~~~g~~-~--v~~~~~~~----~~~~i~---g~~D 239 (364)
.++++||+||++.+|...++.+...|++|+.+.++++.+ .+.+.+.. . ..|..+.+ +.+.+. |++|
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id 93 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKID 93 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 478999999999999999999999999999988764322 23333432 1 22333332 222221 4589
Q ss_pred EEEECCCC
Q 017901 240 AVLDTIGA 247 (364)
Q Consensus 240 ~vid~~g~ 247 (364)
++|.+.|.
T Consensus 94 ~li~~ag~ 101 (258)
T PRK06935 94 ILVNNAGT 101 (258)
T ss_pred EEEECCCC
Confidence 99999884
No 286
>PRK09291 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.056 Score=47.60 Aligned_cols=73 Identities=19% Similarity=0.266 Sum_probs=49.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH----HHcCCc-e--eeeCCCh-hHHHHhcCCccEEEECC
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAE-Q--AVDYSSK-DIELAIKGKFDAVLDTI 245 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~----~~~g~~-~--v~~~~~~-~~~~~i~g~~D~vid~~ 245 (364)
+.+++|+|++|.+|..+++.+...|++|++++++... ..+ ...+.. . ..|..+. ++.....+++|++|.+.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 4689999999999999999999999999999886543 222 223322 1 2244443 33333333499999998
Q ss_pred CC
Q 017901 246 GA 247 (364)
Q Consensus 246 g~ 247 (364)
|.
T Consensus 82 g~ 83 (257)
T PRK09291 82 GI 83 (257)
T ss_pred Cc
Confidence 83
No 287
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.81 E-value=0.072 Score=46.94 Aligned_cols=74 Identities=20% Similarity=0.389 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-H-HHHHHcCCce-eeeCCChh-H---HHHhc---CCccEEEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-I-DRVLAAGAEQ-AVDYSSKD-I---ELAIK---GKFDAVLD 243 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~-~~~~~~g~~~-v~~~~~~~-~---~~~i~---g~~D~vid 243 (364)
.+++++|+|++|++|..+++.+...|++|+.+.+..+ . +.+.+.+... ..|..+.+ . .+.+. +++|++|.
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4688999999999999999999999999988755432 2 3333333322 23443332 2 22221 45999999
Q ss_pred CCCC
Q 017901 244 TIGA 247 (364)
Q Consensus 244 ~~g~ 247 (364)
|.|.
T Consensus 86 ~ag~ 89 (255)
T PRK06463 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 9875
No 288
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.79 E-value=0.086 Score=48.59 Aligned_cols=88 Identities=17% Similarity=0.211 Sum_probs=63.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH--
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE-- 251 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~-- 251 (364)
.|+++.|.| .|.+|...++.++.+|.+|++..+..+.......+.. + .++.+.+.. .|+|+-++......
T Consensus 149 ~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~----~--~~l~ell~~-aDiV~l~lP~t~~T~~ 220 (333)
T PRK13243 149 YGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPEAEKELGAE----Y--RPLEELLRE-SDFVSLHVPLTKETYH 220 (333)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChhhHHHcCCE----e--cCHHHHHhh-CCEEEEeCCCChHHhh
Confidence 578999999 8999999999999999999988765544333444432 1 133444444 89999988764221
Q ss_pred ---HHHHhhccCCCEEEEEcc
Q 017901 252 ---RLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 252 ---~~~~~~l~~~G~~v~~g~ 269 (364)
...+..++++..+|.++-
T Consensus 221 ~i~~~~~~~mk~ga~lIN~aR 241 (333)
T PRK13243 221 MINEERLKLMKPTAILVNTAR 241 (333)
T ss_pred ccCHHHHhcCCCCeEEEECcC
Confidence 366788899988888763
No 289
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.79 E-value=0.059 Score=47.48 Aligned_cols=74 Identities=19% Similarity=0.281 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HHHHHcCCc-ee--eeCCCh-h---HHHHhc---CCccE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAGAE-QA--VDYSSK-D---IELAIK---GKFDA 240 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~~~~g~~-~v--~~~~~~-~---~~~~i~---g~~D~ 240 (364)
.|++++|+|+++++|..+++.+...|++|+.+.+.+.. +.+.+.+.. .. .|..+. + +.+.+. +++|+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~ 88 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI 88 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 46799999999999999999999999999987554322 233444432 11 233332 2 222222 55999
Q ss_pred EEECCCC
Q 017901 241 VLDTIGA 247 (364)
Q Consensus 241 vid~~g~ 247 (364)
+|.+.|.
T Consensus 89 li~~Ag~ 95 (253)
T PRK08993 89 LVNNAGL 95 (253)
T ss_pred EEECCCC
Confidence 9999885
No 290
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.78 E-value=0.07 Score=47.10 Aligned_cols=74 Identities=23% Similarity=0.377 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH---HHHcCCce---eeeCCCh-h---HHHHhc---CCcc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR---VLAAGAEQ---AVDYSSK-D---IELAIK---GKFD 239 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~---~~~~g~~~---v~~~~~~-~---~~~~i~---g~~D 239 (364)
.+++++|+|++|.+|..+++.+...|++|+.+.+++.. +. +...+.+. ..|..+. + +.+.+. +++|
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence 46789999999999999999999999999988876543 22 22334321 2344432 1 222221 4599
Q ss_pred EEEECCCC
Q 017901 240 AVLDTIGA 247 (364)
Q Consensus 240 ~vid~~g~ 247 (364)
++|.+.|.
T Consensus 87 ~lv~nAg~ 94 (260)
T PRK12823 87 VLINNVGG 94 (260)
T ss_pred EEEECCcc
Confidence 99999873
No 291
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.77 E-value=0.1 Score=46.86 Aligned_cols=96 Identities=19% Similarity=0.266 Sum_probs=69.4
Q ss_pred cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHc----CCeEEEeeCCccHHHHHHcCCceeeeCCChh
Q 017901 154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS----GCHVSATCGSKSIDRVLAAGAEQAVDYSSKD 229 (364)
Q Consensus 154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~----g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~ 229 (364)
..||+....+..|....---.|++++|.|.+..+|.=++.++... +++|+.+-+. +.+
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~------------------T~~ 197 (297)
T PRK14167 136 FKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSR------------------TDD 197 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCC------------------CCC
Confidence 456766666666643322357999999999999999999999876 7888775221 122
Q ss_pred HHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 230 IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 230 ~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
+.+.++. +|+++-++|.+..+. -+++++|..++.+|..
T Consensus 198 l~~~~~~-ADIvIsAvGkp~~i~--~~~ik~gaiVIDvGin 235 (297)
T PRK14167 198 LAAKTRR-ADIVVAAAGVPELID--GSMLSEGATVIDVGIN 235 (297)
T ss_pred HHHHHhh-CCEEEEccCCcCccC--HHHcCCCCEEEEcccc
Confidence 3334444 999999999985443 4889999999999965
No 292
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.76 E-value=0.056 Score=47.73 Aligned_cols=74 Identities=18% Similarity=0.287 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H---HHHHcCCce-e--eeCCChh-H---HHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D---RVLAAGAEQ-A--VDYSSKD-I---ELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~---~~~~~g~~~-v--~~~~~~~-~---~~~i~---g~~ 238 (364)
.+++++|+|++|.+|..+++.+...|++|+.+.++++. + .+++.+... . .|.++.+ + .+.+. +++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999988877642 2 233444432 1 2333332 1 22221 458
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.|.|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999999885
No 293
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.074 Score=46.95 Aligned_cols=77 Identities=22% Similarity=0.298 Sum_probs=49.9
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH---HH---HHHcCC-c-ee--eeCCCh-h---HHHHhc
Q 017901 171 RMSEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI---DR---VLAAGA-E-QA--VDYSSK-D---IELAIK 235 (364)
Q Consensus 171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~---~~---~~~~g~-~-~v--~~~~~~-~---~~~~i~ 235 (364)
.+.++.+++|+||+|++|...++.+...| ++|+++.++.+. +. +...+. + ++ .|..+. + +.+.+.
T Consensus 4 ~~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 4 AVGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred ccCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 35678899999999999999998877774 899999876542 22 333332 1 12 233332 2 222222
Q ss_pred --CCccEEEECCCC
Q 017901 236 --GKFDAVLDTIGA 247 (364)
Q Consensus 236 --g~~D~vid~~g~ 247 (364)
|++|+++.+.|.
T Consensus 84 ~~g~id~li~~ag~ 97 (253)
T PRK07904 84 AGGDVDVAIVAFGL 97 (253)
T ss_pred hcCCCCEEEEeeec
Confidence 459999988765
No 294
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=95.74 E-value=0.09 Score=47.93 Aligned_cols=97 Identities=19% Similarity=0.212 Sum_probs=70.9
Q ss_pred ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901 153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL 232 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 232 (364)
...||+.......|....---.|++++|.|.+..+|.=+..++...+++|+.+.+. +.++.+
T Consensus 192 ~~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~------------------T~nl~~ 253 (345)
T PLN02897 192 LFVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAF------------------TKDPEQ 253 (345)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCC------------------CCCHHH
Confidence 34566666666666433223479999999999999999999999999998766332 122333
Q ss_pred HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.++. +|+++-++|.+.. ---+++++|..+|.+|..
T Consensus 254 ~~~~-ADIvIsAvGkp~~--v~~d~vk~GavVIDVGin 288 (345)
T PLN02897 254 ITRK-ADIVIAAAGIPNL--VRGSWLKPGAVVIDVGTT 288 (345)
T ss_pred HHhh-CCEEEEccCCcCc--cCHHHcCCCCEEEEcccc
Confidence 3444 9999999999844 346889999999999965
No 295
>PRK06484 short chain dehydrogenase; Validated
Probab=95.73 E-value=0.058 Score=53.07 Aligned_cols=74 Identities=26% Similarity=0.396 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce---eeeCCCh-hH---HHHhc---CCccEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ---AVDYSSK-DI---ELAIK---GKFDAV 241 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~---v~~~~~~-~~---~~~i~---g~~D~v 241 (364)
.+++++|+|+++++|..+++.+...|++|+.+.++... +...+++... .+|..+. ++ .+.+. |++|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 57899999999999999999999999999999776553 3445555432 2344433 22 22222 559999
Q ss_pred EECCCC
Q 017901 242 LDTIGA 247 (364)
Q Consensus 242 id~~g~ 247 (364)
|.+.|.
T Consensus 84 i~nag~ 89 (520)
T PRK06484 84 VNNAGV 89 (520)
T ss_pred EECCCc
Confidence 999874
No 296
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=95.72 E-value=0.024 Score=51.01 Aligned_cols=143 Identities=20% Similarity=0.232 Sum_probs=78.9
Q ss_pred CCCCCCEEEEecCCCCCCCcceeEEeecCCccccCCCCCChhhhccccchHHHH--HHHHHHhcccCCCCEEEEEcCCch
Q 017901 109 SLTVGQEVFGALHPTAVRGTYADYAVLSEDELTPKPVSVTHADASAIPFAALTA--WRALKCAARMSEGQRLLVLGGGGA 186 (364)
Q Consensus 109 ~~~~Gd~V~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta--~~~l~~~~~~~~g~~vli~g~~g~ 186 (364)
.+++|++.+..+. |.+|-.-+.+.++.+.+++.+-.. ....|. ...|.+ ...+|++||=.| .+
T Consensus 107 P~~vg~~~~I~P~-------w~~~~~~~~~~~I~idPg~AFGTG----~H~TT~lcl~~l~~--~~~~g~~vLDvG--~G 171 (295)
T PF06325_consen 107 PIRVGDRLVIVPS-------WEEYPEPPDEIVIEIDPGMAFGTG----HHPTTRLCLELLEK--YVKPGKRVLDVG--CG 171 (295)
T ss_dssp -EEECTTEEEEET-------T----SSTTSEEEEESTTSSS-SS----HCHHHHHHHHHHHH--HSSTTSEEEEES---T
T ss_pred cEEECCcEEEECC-------CcccCCCCCcEEEEECCCCcccCC----CCHHHHHHHHHHHH--hccCCCEEEEeC--Cc
Confidence 3667886666543 555522234455666666543322 111121 222322 257889999998 33
Q ss_pred HHHHHHHHHHHcCC-eEEEeeCCccH-----HHHHHcCCceeee-CCChhHHHHhcCCccEEEECCCCch---hHHHHHh
Q 017901 187 VGFAAVQFSVASGC-HVSATCGSKSI-----DRVLAAGAEQAVD-YSSKDIELAIKGKFDAVLDTIGAPE---TERLGLN 256 (364)
Q Consensus 187 ~G~~~~~~a~~~g~-~vi~~~~~~~~-----~~~~~~g~~~v~~-~~~~~~~~~i~g~~D~vid~~g~~~---~~~~~~~ 256 (364)
.|.+++..++. |+ +|+++..++.. +.+...|...-+. ....+.. .+++|+|+-+.-... ......+
T Consensus 172 SGILaiaA~kl-GA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~~~---~~~~dlvvANI~~~vL~~l~~~~~~ 247 (295)
T PF06325_consen 172 SGILAIAAAKL-GAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSEDLV---EGKFDLVVANILADVLLELAPDIAS 247 (295)
T ss_dssp TSHHHHHHHHT-TBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSCTC---CS-EEEEEEES-HHHHHHHHHHCHH
T ss_pred HHHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecccc---cccCCEEEECCCHHHHHHHHHHHHH
Confidence 57888777775 77 79999665542 3344455432221 1111111 245999999888752 3456677
Q ss_pred hccCCCEEEEEccC
Q 017901 257 FLKRGGHYMTLHGE 270 (364)
Q Consensus 257 ~l~~~G~~v~~g~~ 270 (364)
+++++|.+++-|..
T Consensus 248 ~l~~~G~lIlSGIl 261 (295)
T PF06325_consen 248 LLKPGGYLILSGIL 261 (295)
T ss_dssp HEEEEEEEEEEEEE
T ss_pred hhCCCCEEEEcccc
Confidence 89999999999976
No 297
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.71 E-value=0.053 Score=48.36 Aligned_cols=76 Identities=25% Similarity=0.275 Sum_probs=52.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHH---HHcCCc------eeeeCCChhHHHHh-------
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRV---LAAGAE------QAVDYSSKDIELAI------- 234 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~---~~~g~~------~v~~~~~~~~~~~i------- 234 (364)
-.|+.++|+|++.++|.+.+..+...|++|+.+.++++. +.. ...+.. .+.|....+..+.+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999887764 222 233332 12333332211111
Q ss_pred -cCCccEEEECCCCc
Q 017901 235 -KGKFDAVLDTIGAP 248 (364)
Q Consensus 235 -~g~~D~vid~~g~~ 248 (364)
.|+.|+.+++.|..
T Consensus 86 ~~GkidiLvnnag~~ 100 (270)
T KOG0725|consen 86 FFGKIDILVNNAGAL 100 (270)
T ss_pred hCCCCCEEEEcCCcC
Confidence 16799999988853
No 298
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.70 E-value=0.1 Score=46.83 Aligned_cols=97 Identities=15% Similarity=0.230 Sum_probs=71.3
Q ss_pred ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHc----CCeEEEeeCCccHHHHHHcCCceeeeCCCh
Q 017901 153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS----GCHVSATCGSKSIDRVLAAGAEQAVDYSSK 228 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~----g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~ 228 (364)
+..||+.......|....---.|++++|.|.+..+|.=++.++... +++|+.+-+. +.
T Consensus 139 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~------------------T~ 200 (297)
T PRK14168 139 KFLPCTPAGIQEMLVRSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTR------------------SK 200 (297)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCC------------------Cc
Confidence 3457777666666644333357999999999999999999999887 6788765322 22
Q ss_pred hHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 229 DIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 229 ~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
++.+.++. +|+++-++|.+..+ --+++++|..++.+|..
T Consensus 201 ~l~~~~~~-ADIvVsAvGkp~~i--~~~~ik~gavVIDvGin 239 (297)
T PRK14168 201 NLARHCQR-ADILIVAAGVPNLV--KPEWIKPGATVIDVGVN 239 (297)
T ss_pred CHHHHHhh-CCEEEEecCCcCcc--CHHHcCCCCEEEecCCC
Confidence 34444444 99999999998443 36789999999999965
No 299
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.70 E-value=0.11 Score=46.32 Aligned_cols=96 Identities=17% Similarity=0.202 Sum_probs=70.8
Q ss_pred cccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHH----cCCeEEEeeCCccHHHHHHcCCceeeeCCChh
Q 017901 154 AIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVA----SGCHVSATCGSKSIDRVLAAGAEQAVDYSSKD 229 (364)
Q Consensus 154 ~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~----~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~ 229 (364)
..||+....+..|....---.|++++|.|.+..+|.=+..++.. .+++|+.+.+. +.+
T Consensus 136 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~------------------t~~ 197 (286)
T PRK14184 136 FRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSR------------------TPD 197 (286)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCC------------------chh
Confidence 45777766666664433234789999999999999999999987 78888776432 223
Q ss_pred HHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 230 IELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 230 ~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
+.+.++. +|+++-++|.+..+. -+++++|..++.+|..
T Consensus 198 l~~~~~~-ADIVI~AvG~p~li~--~~~vk~GavVIDVGi~ 235 (286)
T PRK14184 198 LAEECRE-ADFLFVAIGRPRFVT--ADMVKPGAVVVDVGIN 235 (286)
T ss_pred HHHHHHh-CCEEEEecCCCCcCC--HHHcCCCCEEEEeeee
Confidence 4444444 999999999984443 4778999999999965
No 300
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.69 E-value=0.13 Score=45.10 Aligned_cols=70 Identities=19% Similarity=0.316 Sum_probs=47.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCc-ee--eeCCCh-hHH---HHhc---CCccEEEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QA--VDYSSK-DIE---LAIK---GKFDAVLD 243 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~-~v--~~~~~~-~~~---~~i~---g~~D~vid 243 (364)
.+++++|+|++|.+|..+++.+...|++|+++.++. ....+.. .. .|..+. ++. +.+. +++|++|.
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVN 82 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 467899999999999999999989999999998765 1111211 11 233332 222 2221 45899999
Q ss_pred CCCC
Q 017901 244 TIGA 247 (364)
Q Consensus 244 ~~g~ 247 (364)
+.|.
T Consensus 83 ~ag~ 86 (252)
T PRK08220 83 AAGI 86 (252)
T ss_pred CCCc
Confidence 9885
No 301
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.66 E-value=0.11 Score=44.21 Aligned_cols=91 Identities=18% Similarity=0.248 Sum_probs=59.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE 251 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~ 251 (364)
.|.+|+|.| +|.+|..-++.+...|++|+++..... ...+.+.|--..+.. ... ...+.+ +|+||-+++.+..-
T Consensus 8 ~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~-~~~-~~dl~~-~~lVi~at~d~~ln 83 (205)
T TIGR01470 8 EGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLAR-CFD-ADILEG-AFLVIAATDDEELN 83 (205)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeC-CCC-HHHhCC-cEEEEECCCCHHHH
Confidence 467999999 799999999999999999988865433 233333332112211 111 223446 99999999997444
Q ss_pred HHHHhhccCCCEEEEEc
Q 017901 252 RLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 252 ~~~~~~l~~~G~~v~~g 268 (364)
.......+..|.+|.+.
T Consensus 84 ~~i~~~a~~~~ilvn~~ 100 (205)
T TIGR01470 84 RRVAHAARARGVPVNVV 100 (205)
T ss_pred HHHHHHHHHcCCEEEEC
Confidence 55666666777777554
No 302
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.63 E-value=0.074 Score=47.18 Aligned_cols=74 Identities=18% Similarity=0.361 Sum_probs=47.8
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHcCCeEEEeeCCccH-HHH----HHcCCcee--eeCCCh-h---HHHHhc---CC
Q 017901 174 EGQRLLVLGG--GGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAEQA--VDYSSK-D---IELAIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~--~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~----~~~g~~~v--~~~~~~-~---~~~~i~---g~ 237 (364)
.+++++|+|| ++++|.+.++.+...|++|+.+.+.++. +.+ .+.+.... .|..+. + +.+.+. |+
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 5689999996 5699999999999999999887654432 222 23332222 233332 2 222222 56
Q ss_pred ccEEEECCCC
Q 017901 238 FDAVLDTIGA 247 (364)
Q Consensus 238 ~D~vid~~g~ 247 (364)
+|+++++.|.
T Consensus 85 iD~lVnnAG~ 94 (261)
T PRK08690 85 LDGLVHSIGF 94 (261)
T ss_pred CcEEEECCcc
Confidence 9999999875
No 303
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.60 E-value=0.082 Score=46.56 Aligned_cols=74 Identities=23% Similarity=0.314 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---H---HHHHcCCc-ee--eeCCCh-hHHH---Hhc---CC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---D---RVLAAGAE-QA--VDYSSK-DIEL---AIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~---~~~~~g~~-~v--~~~~~~-~~~~---~i~---g~ 237 (364)
.+++++|+|+++++|..+++.+...|++|+.+.++... + .+...+.. .. .|..+. ++.+ .+. |+
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46799999999999999999999999999998765431 2 22333422 12 233332 2222 221 55
Q ss_pred ccEEEECCCC
Q 017901 238 FDAVLDTIGA 247 (364)
Q Consensus 238 ~D~vid~~g~ 247 (364)
+|++|.+.|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 8999999985
No 304
>PRK06398 aldose dehydrogenase; Validated
Probab=95.59 E-value=0.049 Score=48.17 Aligned_cols=70 Identities=21% Similarity=0.265 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCc-eeeeCCCh-hH---HHHhc---CCccEEEECC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSK-DI---ELAIK---GKFDAVLDTI 245 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~-~v~~~~~~-~~---~~~i~---g~~D~vid~~ 245 (364)
.|++++|+|+++++|..+++.+...|++|+.+.+++.... ... ...|..+. ++ .+.+. +++|++|.+.
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~----~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~A 80 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN----DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNA 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC----ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4689999999999999999999999999999877654311 111 12233333 22 22222 4599999998
Q ss_pred CC
Q 017901 246 GA 247 (364)
Q Consensus 246 g~ 247 (364)
|.
T Consensus 81 g~ 82 (258)
T PRK06398 81 GI 82 (258)
T ss_pred CC
Confidence 74
No 305
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.59 E-value=0.074 Score=47.13 Aligned_cols=74 Identities=22% Similarity=0.325 Sum_probs=48.1
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCcee--eeCCChh----HHHHhc---CC
Q 017901 174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQA--VDYSSKD----IELAIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~~g--~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~v--~~~~~~~----~~~~i~---g~ 237 (364)
.|++++|+||++ ++|.++++.+...|++|+...++++. + +..+.|.... .|..+.+ +.+.+. |+
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 568899999886 89999998888889999888765421 1 2233343322 3444332 222221 56
Q ss_pred ccEEEECCCC
Q 017901 238 FDAVLDTIGA 247 (364)
Q Consensus 238 ~D~vid~~g~ 247 (364)
+|+++++.|.
T Consensus 87 iDilVnnag~ 96 (260)
T PRK06603 87 FDFLLHGMAF 96 (260)
T ss_pred ccEEEEcccc
Confidence 9999998874
No 306
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.58 E-value=0.077 Score=46.67 Aligned_cols=73 Identities=19% Similarity=0.327 Sum_probs=48.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-H---HHHcCCc-eee--eCCChh-H---HHHhc---CCcc
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAAGAE-QAV--DYSSKD-I---ELAIK---GKFD 239 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~---~~~~g~~-~v~--~~~~~~-~---~~~i~---g~~D 239 (364)
|++++|.|+++++|...++.+...|++|+++.++... + . +.+.+.. ..+ |..+.+ + .+.+. +++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 4689999999999999999999999999999876542 2 2 2222322 122 333332 2 22221 4589
Q ss_pred EEEECCCC
Q 017901 240 AVLDTIGA 247 (364)
Q Consensus 240 ~vid~~g~ 247 (364)
++|.+.|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999874
No 307
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.58 E-value=0.069 Score=47.09 Aligned_cols=74 Identities=22% Similarity=0.290 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc-ee--eeCCCh-hHHH---Hhc---CCccEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-QA--VDYSSK-DIEL---AIK---GKFDAV 241 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~-~v--~~~~~~-~~~~---~i~---g~~D~v 241 (364)
.+++++|+|++|.+|..+++.+...|++|+.+.++.+. ....+++.. .. .|..+. +... .+. +++|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 35789999999999999999999999999999877654 233333322 11 233332 2222 221 458999
Q ss_pred EECCCC
Q 017901 242 LDTIGA 247 (364)
Q Consensus 242 id~~g~ 247 (364)
+.+.|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 998874
No 308
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.064 Score=47.01 Aligned_cols=74 Identities=23% Similarity=0.355 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHc--CCc-eee--eCCCh-hHH---HHhc---CCcc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAA--GAE-QAV--DYSSK-DIE---LAIK---GKFD 239 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~--g~~-~v~--~~~~~-~~~---~~i~---g~~D 239 (364)
.+.+++|.|++|.+|..+++.+...|++|+.+.++.+. ....++ +.. ..+ |..+. ++. +.+. +++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46789999999999999999888889999999887653 222222 221 122 33332 222 2221 4599
Q ss_pred EEEECCCC
Q 017901 240 AVLDTIGA 247 (364)
Q Consensus 240 ~vid~~g~ 247 (364)
++|.+.|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99999985
No 309
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.56 E-value=0.096 Score=47.02 Aligned_cols=93 Identities=18% Similarity=0.304 Sum_probs=59.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE 249 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~ 249 (364)
..+.+++|.| +|++|.+++..+...| .+|+.+.|+.++ +++.+++....+.. ..+..+.+.+ +|+||+|++...
T Consensus 121 ~~~k~vlVlG-aGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~~~~~~~~-~DivInaTp~g~ 197 (278)
T PRK00258 121 LKGKRILILG-AGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLELQEELAD-FDLIINATSAGM 197 (278)
T ss_pred CCCCEEEEEc-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cccchhcccc-CCEEEECCcCCC
Confidence 4567899999 6999999999999999 588888887654 33444432110111 1122233334 999999988641
Q ss_pred h-----HHHHHhhccCCCEEEEEc
Q 017901 250 T-----ERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 250 ~-----~~~~~~~l~~~G~~v~~g 268 (364)
. ......+++++..++.+-
T Consensus 198 ~~~~~~~~~~~~~l~~~~~v~Div 221 (278)
T PRK00258 198 SGELPLPPLPLSLLRPGTIVYDMI 221 (278)
T ss_pred CCCCCCCCCCHHHcCCCCEEEEee
Confidence 1 122345677777777664
No 310
>PRK04148 hypothetical protein; Provisional
Probab=95.56 E-value=0.13 Score=40.38 Aligned_cols=89 Identities=15% Similarity=0.130 Sum_probs=58.0
Q ss_pred cccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeC-CChhHHHHhcCCccEEEECCCC
Q 017901 170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDY-SSKDIELAIKGKFDAVLDTIGA 247 (364)
Q Consensus 170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~-~~~~~~~~i~g~~D~vid~~g~ 247 (364)
....++.++++.| .| .|...+..+...|..|+++..+++. +.+++.+.+.+.+. .+.++ +.-.+ +|+++.+-..
T Consensus 12 ~~~~~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~-~~y~~-a~liysirpp 87 (134)
T PRK04148 12 YEKGKNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL-EIYKN-AKLIYSIRPP 87 (134)
T ss_pred cccccCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH-HHHhc-CCEEEEeCCC
Confidence 3334568899999 77 8876666666789999999877765 77777776544331 11111 11114 8999998888
Q ss_pred chhHHHHHhhccCCC
Q 017901 248 PETERLGLNFLKRGG 262 (364)
Q Consensus 248 ~~~~~~~~~~l~~~G 262 (364)
++.....++..+.-|
T Consensus 88 ~el~~~~~~la~~~~ 102 (134)
T PRK04148 88 RDLQPFILELAKKIN 102 (134)
T ss_pred HHHHHHHHHHHHHcC
Confidence 755555555554433
No 311
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.075 Score=46.72 Aligned_cols=74 Identities=22% Similarity=0.302 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCc-ee--eeCCCh-hH---HHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAE-QA--VDYSSK-DI---ELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~-~v--~~~~~~-~~---~~~i~---g~~ 238 (364)
.+++++|.|++|.+|..+++.+...|++|+.+.++++. +.+.+.+.. .. .|..+. ++ .+.+. |++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999998899999999887543 122333332 12 233332 22 22221 558
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999999884
No 312
>PLN02928 oxidoreductase family protein
Probab=95.55 E-value=0.12 Score=47.99 Aligned_cols=94 Identities=20% Similarity=0.155 Sum_probs=63.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcC----C-ceeee--CCChhHHHHhcCCccEEEECCC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAG----A-EQAVD--YSSKDIELAIKGKFDAVLDTIG 246 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g----~-~~v~~--~~~~~~~~~i~g~~D~vid~~g 246 (364)
.|+++.|.| .|.+|..+++.++.+|++|++..++........++ . ....+ ....++.+.+.. .|+|+.++.
T Consensus 158 ~gktvGIiG-~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~-aDiVvl~lP 235 (347)
T PLN02928 158 FGKTVFILG-YGAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGE-ADIVVLCCT 235 (347)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhh-CCEEEECCC
Confidence 578999999 89999999999999999999987653322111110 0 00000 112244555545 899999887
Q ss_pred Cchh-----HHHHHhhccCCCEEEEEcc
Q 017901 247 APET-----ERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 247 ~~~~-----~~~~~~~l~~~G~~v~~g~ 269 (364)
.... -...+..|+++..+|.++-
T Consensus 236 lt~~T~~li~~~~l~~Mk~ga~lINvaR 263 (347)
T PLN02928 236 LTKETAGIVNDEFLSSMKKGALLVNIAR 263 (347)
T ss_pred CChHhhcccCHHHHhcCCCCeEEEECCC
Confidence 5322 1477889999999998873
No 313
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.55 E-value=0.16 Score=44.43 Aligned_cols=96 Identities=19% Similarity=0.285 Sum_probs=61.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--H-H---HHHHcCCce-e--eeCCChh-H---HHHhc---CCc
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--I-D---RVLAAGAEQ-A--VDYSSKD-I---ELAIK---GKF 238 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--~-~---~~~~~g~~~-v--~~~~~~~-~---~~~i~---g~~ 238 (364)
+.+++|.|++|.+|..+++.+...|++|+.+.++.. . . .+++.+... . .|.++.+ + .+.+. +++
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA 85 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999988889999887765432 1 1 223334321 2 2333322 2 22221 348
Q ss_pred cEEEECCCCc----------h---------------hHHHHHhhccCCCEEEEEccC
Q 017901 239 DAVLDTIGAP----------E---------------TERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 239 D~vid~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~ 270 (364)
|++|.+.|.. + ..+.+.+.++..|+++.++..
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~ 142 (252)
T PRK06077 86 DILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASV 142 (252)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcch
Confidence 9999999841 0 023455666778899998864
No 314
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.097 Score=45.61 Aligned_cols=75 Identities=20% Similarity=0.288 Sum_probs=49.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHH---HHcCCc-ee--eeCCCh-hH---HHHhc---CC
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRV---LAAGAE-QA--VDYSSK-DI---ELAIK---GK 237 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~---~~~g~~-~v--~~~~~~-~~---~~~i~---g~ 237 (364)
..+++++|.|++|.+|..++..+...|++|+++.++.+. +.. .+.+.. .. .|.++. ++ .+.+. ++
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 346789999999999999999999999999999887653 222 222222 12 233332 22 22221 45
Q ss_pred ccEEEECCCC
Q 017901 238 FDAVLDTIGA 247 (364)
Q Consensus 238 ~D~vid~~g~ 247 (364)
+|++|.+.|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 9999999985
No 315
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.54 E-value=0.076 Score=46.88 Aligned_cols=73 Identities=14% Similarity=0.186 Sum_probs=48.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHcCC--c-e--eeeCCCh-hHHH---Hhc---CCccE
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGA--E-Q--AVDYSSK-DIEL---AIK---GKFDA 240 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~g~--~-~--v~~~~~~-~~~~---~i~---g~~D~ 240 (364)
+.+++|+|++|++|..+++.+...|++|+.+.++.+. + ...++.. . . ..|..+. ++.+ .+. |++|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 4689999999999999999999899999999876543 2 2232221 1 1 1233333 2222 221 45899
Q ss_pred EEECCCC
Q 017901 241 VLDTIGA 247 (364)
Q Consensus 241 vid~~g~ 247 (364)
+|.+.|.
T Consensus 82 lv~~ag~ 88 (257)
T PRK07024 82 VIANAGI 88 (257)
T ss_pred EEECCCc
Confidence 9999874
No 316
>PRK09242 tropinone reductase; Provisional
Probab=95.52 E-value=0.074 Score=46.90 Aligned_cols=74 Identities=19% Similarity=0.259 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHH---c--CCce---eeeCCChh----HHHHhc---C
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLA---A--GAEQ---AVDYSSKD----IELAIK---G 236 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~---~--g~~~---v~~~~~~~----~~~~i~---g 236 (364)
.+++++|+|++|.+|..+++.+...|++|+.+.++.+. +...+ . +... ..|..+.+ +.+.+. +
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999999999876543 22222 2 2211 12333322 222221 5
Q ss_pred CccEEEECCCC
Q 017901 237 KFDAVLDTIGA 247 (364)
Q Consensus 237 ~~D~vid~~g~ 247 (364)
++|+++.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 59999999985
No 317
>PRK08628 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.072 Score=46.99 Aligned_cols=74 Identities=18% Similarity=0.228 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH---HHHcCCc-e--eeeCCChh-HHH---Hhc---CCcc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR---VLAAGAE-Q--AVDYSSKD-IEL---AIK---GKFD 239 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~---~~~~g~~-~--v~~~~~~~-~~~---~i~---g~~D 239 (364)
.+.+++|+||+|.+|..+++.+...|++|+.+.+++.. +. +++.+.. . ..|..+.+ +.. .+. +++|
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 46789999999999999999999999999888776543 22 2333432 1 22333322 222 221 4599
Q ss_pred EEEECCCC
Q 017901 240 AVLDTIGA 247 (364)
Q Consensus 240 ~vid~~g~ 247 (364)
++|.+.|.
T Consensus 86 ~vi~~ag~ 93 (258)
T PRK08628 86 GLVNNAGV 93 (258)
T ss_pred EEEECCcc
Confidence 99999984
No 318
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.081 Score=46.67 Aligned_cols=74 Identities=24% Similarity=0.360 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH-H----HHHHcCCce---eeeCCChh-H---HHHhc---CC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI-D----RVLAAGAEQ---AVDYSSKD-I---ELAIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~-~----~~~~~g~~~---v~~~~~~~-~---~~~i~---g~ 237 (364)
.+++++|.|++|.+|..+++.+...|++ |+.+.++.+. . .+.+.+... ..|..+.+ + .+.+. ++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5688999999999999999999999998 8888776432 2 223334321 23444332 2 12221 45
Q ss_pred ccEEEECCCC
Q 017901 238 FDAVLDTIGA 247 (364)
Q Consensus 238 ~D~vid~~g~ 247 (364)
+|++|.+.|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 9999999985
No 319
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.074 Score=48.37 Aligned_cols=37 Identities=22% Similarity=0.373 Sum_probs=33.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS 210 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~ 210 (364)
.+++++|+||+|++|..+++.+...|++|+.+.++.+
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~ 51 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLD 51 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5689999999999999999988888999999888654
No 320
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.07 Score=48.60 Aligned_cols=35 Identities=29% Similarity=0.222 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~ 208 (364)
.|++++|+||++++|.++++.+...|++|+.+.++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 47899999999999999999999999999998775
No 321
>PRK08643 acetoin reductase; Validated
Probab=95.50 E-value=0.072 Score=46.90 Aligned_cols=73 Identities=23% Similarity=0.394 Sum_probs=49.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce---eeeCCChh-H---HHHhc---CCcc
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ---AVDYSSKD-I---ELAIK---GKFD 239 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~---v~~~~~~~-~---~~~i~---g~~D 239 (364)
+++++|+|++|.+|..+++.+...|++|+.+.++.+. .. +.+.+... ..|..+.+ + .+.+. +++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5689999999999999999999999999999876543 22 22333221 12333332 1 22221 4599
Q ss_pred EEEECCCC
Q 017901 240 AVLDTIGA 247 (364)
Q Consensus 240 ~vid~~g~ 247 (364)
++|.+.|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999875
No 322
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=95.50 E-value=0.11 Score=45.79 Aligned_cols=97 Identities=18% Similarity=0.244 Sum_probs=72.0
Q ss_pred ccccchHHHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHH
Q 017901 153 SAIPFAALTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIEL 232 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~ 232 (364)
...||+.......+.+..---.|.+++|.|.+.-+|.=..+++...+++|..+-+.. .++.+
T Consensus 134 ~~~PCTp~gi~~ll~~~~i~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T------------------~~l~~ 195 (283)
T COG0190 134 GFLPCTPAGIMTLLEEYGIDLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRT------------------KDLAS 195 (283)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCC------------------CCHHH
Confidence 345677666666664433335789999999999999999999999999988764322 22333
Q ss_pred HhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 233 AIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 233 ~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.++. +|+++-++|.+..+. .+++++|..++.+|..
T Consensus 196 ~~k~-ADIvv~AvG~p~~i~--~d~vk~gavVIDVGin 230 (283)
T COG0190 196 ITKN-ADIVVVAVGKPHFIK--ADMVKPGAVVIDVGIN 230 (283)
T ss_pred Hhhh-CCEEEEecCCccccc--cccccCCCEEEecCCc
Confidence 3334 999999999984444 6899999999999975
No 323
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.48 E-value=0.077 Score=46.94 Aligned_cols=73 Identities=19% Similarity=0.299 Sum_probs=48.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-H---HHHcCCce---eeeCCCh-hHH---HHhc---CCcc
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAAGAEQ---AVDYSSK-DIE---LAIK---GKFD 239 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~---~~~~g~~~---v~~~~~~-~~~---~~i~---g~~D 239 (364)
+.+++|.|++|.+|..+++.+...|++|+++.+++.. + . +...+... ..|..+. .+. +.+. +++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 3579999999999999999999999999999887543 2 1 22333321 1233332 221 2221 3489
Q ss_pred EEEECCCC
Q 017901 240 AVLDTIGA 247 (364)
Q Consensus 240 ~vid~~g~ 247 (364)
++|.|.|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999875
No 324
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.47 E-value=0.13 Score=47.02 Aligned_cols=88 Identities=15% Similarity=0.178 Sum_probs=63.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH--
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE-- 251 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~-- 251 (364)
.|+++.|.| .|.+|...++.++.+|.+|++..+..+.. .+..... ...++.+.+.+ .|+|+.++...+..
T Consensus 135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~----~~~~~~~--~~~~l~e~l~~-aDvvv~~lPlt~~T~~ 206 (312)
T PRK15469 135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSW----PGVQSFA--GREELSAFLSQ-TRVLINLLPNTPETVG 206 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCC----CCceeec--ccccHHHHHhc-CCEEEECCCCCHHHHH
Confidence 578999999 99999999999999999999986643321 1222121 22345555555 99999998865332
Q ss_pred ---HHHHhhccCCCEEEEEcc
Q 017901 252 ---RLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 252 ---~~~~~~l~~~G~~v~~g~ 269 (364)
...++.|+++..+|.+|-
T Consensus 207 li~~~~l~~mk~ga~lIN~aR 227 (312)
T PRK15469 207 IINQQLLEQLPDGAYLLNLAR 227 (312)
T ss_pred HhHHHHHhcCCCCcEEEECCC
Confidence 356788999999998874
No 325
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.47 E-value=0.098 Score=46.26 Aligned_cols=74 Identities=18% Similarity=0.246 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH---HHHcCCce---eeeCCChh-H---HHHhc---CCcc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR---VLAAGAEQ---AVDYSSKD-I---ELAIK---GKFD 239 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~---~~~~g~~~---v~~~~~~~-~---~~~i~---g~~D 239 (364)
.+.+++|+|++|.+|..+++.+...|++|+.+.++++. +. +.+.+... ..|..+.+ + .+.+. +++|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46789999999999999999999999999998877643 22 22223221 22333322 1 22221 4589
Q ss_pred EEEECCCC
Q 017901 240 AVLDTIGA 247 (364)
Q Consensus 240 ~vid~~g~ 247 (364)
++|.+.|.
T Consensus 85 ~vi~~ag~ 92 (263)
T PRK08226 85 ILVNNAGV 92 (263)
T ss_pred EEEECCCc
Confidence 99999884
No 326
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.47 E-value=0.082 Score=45.86 Aligned_cols=74 Identities=15% Similarity=0.128 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce-e--eeCCCh-h---HHHHhc---C-C
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ-A--VDYSSK-D---IELAIK---G-K 237 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~-v--~~~~~~-~---~~~~i~---g-~ 237 (364)
.|++++|.|+++++|.+.+..+...|++|+.+.++.+. +. +.+.+.+. . .|..+. + +.+.+. | +
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999999999998776553 22 23334331 1 233332 2 222221 5 6
Q ss_pred ccEEEECCCC
Q 017901 238 FDAVLDTIGA 247 (364)
Q Consensus 238 ~D~vid~~g~ 247 (364)
+|++|.+.|.
T Consensus 84 iD~li~nag~ 93 (227)
T PRK08862 84 PDVLVNNWTS 93 (227)
T ss_pred CCEEEECCcc
Confidence 9999999873
No 327
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=95.46 E-value=0.24 Score=46.15 Aligned_cols=110 Identities=26% Similarity=0.194 Sum_probs=67.1
Q ss_pred hccccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-------------------H
Q 017901 152 ASAIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-------------------I 211 (364)
Q Consensus 152 aa~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-------------------~ 211 (364)
|-...+.+++- .++ +.... -.|.+|.|.| .|.+|+.+++.+...|++|+++..+.. .
T Consensus 185 aTg~Gv~~~~~-~a~-~~~g~~l~G~rVaVQG-~GNVg~~aa~~l~~~GAkvva~sds~g~i~~~~Gld~~~l~~~~~~~ 261 (411)
T COG0334 185 ATGYGVFYAIR-EAL-KALGDDLEGARVAVQG-FGNVGQYAAEKLHELGAKVVAVSDSKGGIYDEDGLDVEALLELKERR 261 (411)
T ss_pred ccceehHHHHH-HHH-HHcCCCcCCCEEEEEC-ccHHHHHHHHHHHHcCCEEEEEEcCCCceecCCCCCHHHHHHHhhhh
Confidence 33333333333 444 33343 4899999999 999999999999999999999965443 1
Q ss_pred -HHHHHcCCceeee-----CC-------------ChhHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEE
Q 017901 212 -DRVLAAGAEQAVD-----YS-------------SKDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267 (364)
Q Consensus 212 -~~~~~~g~~~v~~-----~~-------------~~~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~ 267 (364)
......|+..+-+ .+ +.+-.+.+ ++++|.+...++ +...+.+.+...|.++.-
T Consensus 262 ~~v~~~~ga~~i~~~e~~~~~cDIl~PcA~~n~I~~~na~~l--~ak~V~EgAN~P-~t~eA~~i~~erGIl~~P 333 (411)
T COG0334 262 GSVAEYAGAEYITNEELLEVDCDILIPCALENVITEDNADQL--KAKIVVEGANGP-TTPEADEILLERGILVVP 333 (411)
T ss_pred hhHHhhcCceEccccccccccCcEEcccccccccchhhHHHh--hhcEEEeccCCC-CCHHHHHHHHHCCCEEcC
Confidence 1222234322211 00 01112222 277888888887 667777777777765543
No 328
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.081 Score=46.32 Aligned_cols=74 Identities=22% Similarity=0.256 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCc-e--eeeCCChh-H---HHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAE-Q--AVDYSSKD-I---ELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~-~--v~~~~~~~-~---~~~i~---g~~ 238 (364)
.+.+++|+|++|.+|..+++.+...|++|+.+.+++.. .. +.+.+.. . ..|..+.+ + ...+. +++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 46789999999999999999998899999999887542 22 2222221 1 23333322 1 12221 459
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999999984
No 329
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.46 E-value=0.092 Score=46.41 Aligned_cols=96 Identities=20% Similarity=0.320 Sum_probs=61.7
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHcCCeEEEeeCCc--c-H-HHHHHcCCc---eeeeCCChh----HHHHhc---CC
Q 017901 174 EGQRLLVLGG--GGAVGFAAVQFSVASGCHVSATCGSK--S-I-DRVLAAGAE---QAVDYSSKD----IELAIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~--~g~~G~~~~~~a~~~g~~vi~~~~~~--~-~-~~~~~~g~~---~v~~~~~~~----~~~~i~---g~ 237 (364)
.+++++|+|+ ++++|.++++.+...|++|+.+.++. + . +...+++.. ...|..+.+ +.+.+. |+
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4679999998 79999999999988999999887653 2 1 223334321 123333332 222222 56
Q ss_pred ccEEEECCCCch-----------------------------hHHHHHhhccCCCEEEEEcc
Q 017901 238 FDAVLDTIGAPE-----------------------------TERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 238 ~D~vid~~g~~~-----------------------------~~~~~~~~l~~~G~~v~~g~ 269 (364)
+|++|.+.|... ..+.++..++++|+++.++.
T Consensus 86 iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~ 146 (256)
T PRK07889 86 LDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDF 146 (256)
T ss_pred CcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEee
Confidence 999999887420 01345666777889887753
No 330
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.45 E-value=0.075 Score=46.48 Aligned_cols=74 Identities=27% Similarity=0.298 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H---HHHHcCCc-eee--eCCCh-hHHH---Hhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D---RVLAAGAE-QAV--DYSSK-DIEL---AIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~---~~~~~g~~-~v~--~~~~~-~~~~---~i~---g~~ 238 (364)
.+.+++|+||+|.+|...+..+...|++|+++.++... . .+.+.+.. .++ |..+. ++.+ .+. +++
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 46789999999999999999998899999999887442 1 22333322 122 33332 2222 221 458
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999999865
No 331
>PRK12743 oxidoreductase; Provisional
Probab=95.45 E-value=0.091 Score=46.35 Aligned_cols=73 Identities=21% Similarity=0.291 Sum_probs=48.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-cH-----HHHHHcCCc-ee--eeCCChh----HHHHhc---CCc
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SI-----DRVLAAGAE-QA--VDYSSKD----IELAIK---GKF 238 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-~~-----~~~~~~g~~-~v--~~~~~~~----~~~~i~---g~~ 238 (364)
+++++|+||++.+|..+++.+...|++|+.+.++. +. +.+...+.. +. .|..+.+ +.+.+. +++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999998875433 22 123334432 12 2333322 222222 559
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 82 d~li~~ag~ 90 (256)
T PRK12743 82 DVLVNNAGA 90 (256)
T ss_pred CEEEECCCC
Confidence 999999884
No 332
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.43 E-value=0.16 Score=44.13 Aligned_cols=100 Identities=22% Similarity=0.242 Sum_probs=69.6
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCcc-H----HHHHHcCCceeeeCCChhHHHHhc-CCcc
Q 017901 168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKS-I----DRVLAAGAEQAVDYSSKDIELAIK-GKFD 239 (364)
Q Consensus 168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~-~----~~~~~~g~~~v~~~~~~~~~~~i~-g~~D 239 (364)
.+.++.+|++|+=.|. +.|.+++-+|+..|. +|+.....++ . +.++++|....+.....|..+.+- ..+|
T Consensus 88 ~~~gi~pg~rVlEAGt--GSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~~vD 165 (256)
T COG2519 88 ARLGISPGSRVLEAGT--GSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEEDVD 165 (256)
T ss_pred HHcCCCCCCEEEEccc--CchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEeccccccccccccC
Confidence 5688999999998883 368899999998876 7888855443 2 335566655433332233333222 1399
Q ss_pred EEEECCCCc-hhHHHHHhhccCCCEEEEEcc
Q 017901 240 AVLDTIGAP-ETERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 240 ~vid~~g~~-~~~~~~~~~l~~~G~~v~~g~ 269 (364)
++|-=...+ +.+..+.+.|++||.++++-.
T Consensus 166 av~LDmp~PW~~le~~~~~Lkpgg~~~~y~P 196 (256)
T COG2519 166 AVFLDLPDPWNVLEHVSDALKPGGVVVVYSP 196 (256)
T ss_pred EEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence 877666655 688999999999999999864
No 333
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.42 E-value=0.09 Score=46.97 Aligned_cols=97 Identities=23% Similarity=0.354 Sum_probs=62.1
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCccH-----HHHHHcCCcee--eeCCCh----hHHHHhc---CC
Q 017901 174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKSI-----DRVLAAGAEQA--VDYSSK----DIELAIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~~-----~~~~~~g~~~v--~~~~~~----~~~~~i~---g~ 237 (364)
.+++++|+|++ +++|.+.++.+...|++|+.+.++++. +...+++.... .|..+. .+.+.+. |+
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 88 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGK 88 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 56889999986 799999999999999999887665321 22334453222 233332 2222222 56
Q ss_pred ccEEEECCCCch--------------h---------------HHHHHhhccCCCEEEEEccC
Q 017901 238 FDAVLDTIGAPE--------------T---------------ERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 238 ~D~vid~~g~~~--------------~---------------~~~~~~~l~~~G~~v~~g~~ 270 (364)
+|+++.+.|... . .+.++..++.+|+++.++..
T Consensus 89 iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~ 150 (272)
T PRK08159 89 LDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYY 150 (272)
T ss_pred CcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecc
Confidence 999999987420 0 13445566778999887653
No 334
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.41 E-value=0.13 Score=44.80 Aligned_cols=74 Identities=26% Similarity=0.375 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCce-e--eeCCCh-hHHH---Hhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQ-A--VDYSSK-DIEL---AIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~-v--~~~~~~-~~~~---~i~---g~~ 238 (364)
++++++|+|++|.+|...++.+...|.+|+.+.++... + .+...+... . .|..+. ++.+ .+. +++
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 35789999999999999999999999999888887543 2 123334322 1 233332 2222 211 448
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|.+|.+.|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999999875
No 335
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.41 E-value=0.066 Score=52.20 Aligned_cols=73 Identities=19% Similarity=0.231 Sum_probs=53.2
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCc
Q 017901 171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP 248 (364)
Q Consensus 171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~ 248 (364)
.+.+|++|+|.| .|..|++++++++..|++|++...... ...+++.|+.. +.... ..+.+.+ +|+|+.+.|-+
T Consensus 8 ~~~~~~~v~V~G-~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~-~~~~~--~~~~l~~-~D~VV~SpGi~ 81 (488)
T PRK03369 8 PLLPGAPVLVAG-AGVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVAT-VSTSD--AVQQIAD-YALVVTSPGFR 81 (488)
T ss_pred cccCCCeEEEEc-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEE-EcCcc--hHhHhhc-CCEEEECCCCC
Confidence 355789999999 899999999999999999999765433 24466677743 32211 2233445 89999999976
No 336
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.39 E-value=0.091 Score=46.69 Aligned_cols=73 Identities=23% Similarity=0.416 Sum_probs=46.9
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHcCCeEEEeeCCccH-HHHHH----cCCcee--eeCCChh----HHHHhc---CC
Q 017901 174 EGQRLLVLGGGG--AVGFAAVQFSVASGCHVSATCGSKSI-DRVLA----AGAEQA--VDYSSKD----IELAIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~~g--~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~----~g~~~v--~~~~~~~----~~~~i~---g~ 237 (364)
.|++++|+||++ ++|.++++.+...|++|+.+.++++. +.+.+ .+.... .|..+.+ +.+.+. |+
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 478999999875 89999999998899999887765432 22222 221112 2333332 222221 56
Q ss_pred ccEEEECCC
Q 017901 238 FDAVLDTIG 246 (364)
Q Consensus 238 ~D~vid~~g 246 (364)
+|++|++.|
T Consensus 85 iD~linnAg 93 (262)
T PRK07984 85 FDGFVHSIG 93 (262)
T ss_pred CCEEEECCc
Confidence 999999997
No 337
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.38 E-value=0.11 Score=46.79 Aligned_cols=36 Identities=28% Similarity=0.388 Sum_probs=31.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~ 208 (364)
-.+++++|+||++++|...++.+...|++|+.+.++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~ 39 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIG 39 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCC
Confidence 357899999999999999999998899999888654
No 338
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.35 E-value=0.1 Score=46.16 Aligned_cols=71 Identities=23% Similarity=0.296 Sum_probs=47.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHH---HHcCCcee--eeCCChh-H---HHHhc---CCccEEE
Q 017901 177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRV---LAAGAEQA--VDYSSKD-I---ELAIK---GKFDAVL 242 (364)
Q Consensus 177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~---~~~g~~~v--~~~~~~~-~---~~~i~---g~~D~vi 242 (364)
+++|+|+++++|..+++.+...|++|+.+.++++. +.. .+.+..+. .|..+.+ . .+.+. |++|++|
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 68999999999999999999999999998876543 222 22232222 2333322 2 22221 5599999
Q ss_pred ECCCC
Q 017901 243 DTIGA 247 (364)
Q Consensus 243 d~~g~ 247 (364)
.+.|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 99884
No 339
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.33 E-value=0.092 Score=46.38 Aligned_cols=74 Identities=30% Similarity=0.486 Sum_probs=49.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHc-CCc-ee--eeCCCh-hHHHHhc--CCccEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAA-GAE-QA--VDYSSK-DIELAIK--GKFDAV 241 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~-g~~-~v--~~~~~~-~~~~~i~--g~~D~v 241 (364)
.+++++|.|+++++|..+++.+...|++|+++.++.+. +. +.+. +.. .. .|..+. ++...+. +++|++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 46899999999999999999999999999999876543 22 2221 221 12 233332 2222222 459999
Q ss_pred EECCCC
Q 017901 242 LDTIGA 247 (364)
Q Consensus 242 id~~g~ 247 (364)
|.+.|.
T Consensus 86 v~~ag~ 91 (259)
T PRK06125 86 VNNAGA 91 (259)
T ss_pred EECCCC
Confidence 999885
No 340
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=95.33 E-value=0.14 Score=44.68 Aligned_cols=74 Identities=23% Similarity=0.294 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-c-H-HH---HHHcCCcee---eeCCCh-hH---HHHhc---CC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-S-I-DR---VLAAGAEQA---VDYSSK-DI---ELAIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-~-~-~~---~~~~g~~~v---~~~~~~-~~---~~~i~---g~ 237 (364)
.+++++|+|++|.+|..+++.+...|++|++..+.. . . +. +.+.+.... .|..+. ++ .+.+. ++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 367899999999999999999999999988864322 2 1 22 233344322 233332 22 22221 45
Q ss_pred ccEEEECCCC
Q 017901 238 FDAVLDTIGA 247 (364)
Q Consensus 238 ~D~vid~~g~ 247 (364)
+|++|.+.|.
T Consensus 82 id~li~~ag~ 91 (246)
T PRK12938 82 IDVLVNNAGI 91 (246)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 341
>PRK06720 hypothetical protein; Provisional
Probab=95.30 E-value=0.13 Score=42.49 Aligned_cols=37 Identities=24% Similarity=0.336 Sum_probs=32.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS 210 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~ 210 (364)
.+..++|.|+++++|..++..+...|++|+.+.++..
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~ 51 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQE 51 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHH
Confidence 5789999999999999999999889999998876544
No 342
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.29 E-value=0.1 Score=45.86 Aligned_cols=74 Identities=19% Similarity=0.305 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHH---HHcCCce-e--eeCCChh-H---HHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRV---LAAGAEQ-A--VDYSSKD-I---ELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~---~~~g~~~-v--~~~~~~~-~---~~~i~---g~~ 238 (364)
.++++||+||++++|..+++.+...|++|+.+.++.+. +.. +..+... . .|..+.+ + .+.+. +++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 46789999999999999999999999999998876543 222 2223221 2 2333322 2 22222 459
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|+++.+.|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999984
No 343
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.25 E-value=0.19 Score=42.99 Aligned_cols=96 Identities=26% Similarity=0.289 Sum_probs=59.7
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCce--eeeCCCh-hHHHHhcCCcc
Q 017901 168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQ--AVDYSSK-DIELAIKGKFD 239 (364)
Q Consensus 168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~--v~~~~~~-~~~~~i~g~~D 239 (364)
....++++++||-.|+ | .|..+..+++.. .+|+++..+++. + .+.+.+.+. +...+.. .+. . .+++|
T Consensus 72 ~~l~~~~~~~VLeiG~-G-sG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~-~~~fD 146 (212)
T PRK00312 72 ELLELKPGDRVLEIGT-G-SGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWP-A-YAPFD 146 (212)
T ss_pred HhcCCCCCCEEEEECC-C-ccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCCC-c-CCCcC
Confidence 5577889999999983 3 466666666653 589998766553 2 234445432 2222111 111 1 13499
Q ss_pred EEEECCCCchhHHHHHhhccCCCEEEEEc
Q 017901 240 AVLDTIGAPETERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 240 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g 268 (364)
+|+....-........+.|++||+++..-
T Consensus 147 ~I~~~~~~~~~~~~l~~~L~~gG~lv~~~ 175 (212)
T PRK00312 147 RILVTAAAPEIPRALLEQLKEGGILVAPV 175 (212)
T ss_pred EEEEccCchhhhHHHHHhcCCCcEEEEEE
Confidence 98876554446678889999999987654
No 344
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=95.23 E-value=0.14 Score=42.57 Aligned_cols=73 Identities=19% Similarity=0.211 Sum_probs=51.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--HHHHHHcCC--cee---eeCCChhHH-----HHhc--CCccE
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAGA--EQA---VDYSSKDIE-----LAIK--GKFDA 240 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--~~~~~~~g~--~~v---~~~~~~~~~-----~~i~--g~~D~ 240 (364)
.+.++|.|+++++|.+.+|.+...|++|.+...+.. ++.+..++. +|. .|.++.+.. +..+ |.+++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv 93 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV 93 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence 356799999999999999999999999999865443 355677775 331 233333222 2222 67999
Q ss_pred EEECCCC
Q 017901 241 VLDTIGA 247 (364)
Q Consensus 241 vid~~g~ 247 (364)
+++|.|-
T Consensus 94 lVncAGI 100 (256)
T KOG1200|consen 94 LVNCAGI 100 (256)
T ss_pred EEEcCcc
Confidence 9999995
No 345
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.22 E-value=0.11 Score=45.72 Aligned_cols=74 Identities=27% Similarity=0.476 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCc-ee--eeCCChh-H---HHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAE-QA--VDYSSKD-I---ELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~-~v--~~~~~~~-~---~~~i~---g~~ 238 (364)
.+++++|.|+++.+|..+++.+...|++|+.+.++.+. .. +++.+.. .. .|..+.+ + .+.+. +++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999888899999999887542 22 2333422 12 2333332 2 22222 558
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|.+|.+.|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999999885
No 346
>PRK08278 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.12 Score=46.18 Aligned_cols=36 Identities=17% Similarity=0.402 Sum_probs=31.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK 209 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~ 209 (364)
.+++++|+||+|.+|...++.+...|++|+++.++.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTA 40 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeccc
Confidence 457899999999999999999988999999988754
No 347
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.20 E-value=0.12 Score=45.11 Aligned_cols=74 Identities=19% Similarity=0.314 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc-ee--eeCCChh-HH---HHhc---CCccEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-QA--VDYSSKD-IE---LAIK---GKFDAV 241 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~-~v--~~~~~~~-~~---~~i~---g~~D~v 241 (364)
++.+++|.|++|.+|..+++.+...|+.|+...++.+. +....++.. .+ .|..+.+ +. +.+. +++|++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46789999999999999999998899988877665443 233333322 12 2333322 21 2221 459999
Q ss_pred EECCCC
Q 017901 242 LDTIGA 247 (364)
Q Consensus 242 id~~g~ 247 (364)
|.+.|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 999884
No 348
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=95.18 E-value=0.13 Score=48.04 Aligned_cols=93 Identities=24% Similarity=0.254 Sum_probs=64.2
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH-HHHHHcC---Cc-eeeeCCCh-hHHHHhcCCccEEEECCCCc
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI-DRVLAAG---AE-QAVDYSSK-DIELAIKGKFDAVLDTIGAP 248 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~-~~~~~~g---~~-~v~~~~~~-~~~~~i~g~~D~vid~~g~~ 248 (364)
.+|||.| +|.+|+.+++.+...+ .+|+..+++.+. ..+.... .. ..+|-.+. .+.+.+.+ .|+||+|.+..
T Consensus 2 ~~ilviG-aG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~-~d~VIn~~p~~ 79 (389)
T COG1748 2 MKILVIG-AGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKD-FDLVINAAPPF 79 (389)
T ss_pred CcEEEEC-CchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhc-CCEEEEeCCch
Confidence 4789999 6999999999987777 799999988654 4443332 21 24455444 45566667 89999999987
Q ss_pred hhHHHHHhhccCCCEEEEEccC
Q 017901 249 ETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 249 ~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
-....+-.|++.|=.++.....
T Consensus 80 ~~~~i~ka~i~~gv~yvDts~~ 101 (389)
T COG1748 80 VDLTILKACIKTGVDYVDTSYY 101 (389)
T ss_pred hhHHHHHHHHHhCCCEEEcccC
Confidence 4444444566666666666543
No 349
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.17 E-value=0.11 Score=45.64 Aligned_cols=97 Identities=16% Similarity=0.158 Sum_probs=62.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH-HH-cCCcee-eeCCC--hhHHHHh-cCCccEEEECC
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV-LA-AGAEQA-VDYSS--KDIELAI-KGKFDAVLDTI 245 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~-~~-~g~~~v-~~~~~--~~~~~~i-~g~~D~vid~~ 245 (364)
..+.+++|+||+|.+|..+++.+...|.+|+++.++.+. ... .. .++..+ .|..+ .++.+.+ .+ +|+||.+.
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~-~d~vi~~~ 93 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDD-SDAVICAT 93 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcC-CCEEEECC
Confidence 446789999999999999999998889999999887654 211 11 122211 24433 2455555 35 99999987
Q ss_pred CCch-------------hHHHHHhhccC--CCEEEEEccC
Q 017901 246 GAPE-------------TERLGLNFLKR--GGHYMTLHGE 270 (364)
Q Consensus 246 g~~~-------------~~~~~~~~l~~--~G~~v~~g~~ 270 (364)
|... .....++.++. .+++|.++..
T Consensus 94 g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 94 GFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 7421 12344444443 3588887754
No 350
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.17 E-value=0.1 Score=45.79 Aligned_cols=71 Identities=20% Similarity=0.252 Sum_probs=47.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHHcCCce-e--eeCCCh-hHH---HHhc---CCccEEEEC
Q 017901 177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLAAGAEQ-A--VDYSSK-DIE---LAIK---GKFDAVLDT 244 (364)
Q Consensus 177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~~g~~~-v--~~~~~~-~~~---~~i~---g~~D~vid~ 244 (364)
+++|.|++|.+|...+..+...|++|+.+.++.+. . ....++... . .|..+. ++. +.+. +++|+++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 68999999999999999999999999999887653 2 233344321 1 233332 222 2221 349999999
Q ss_pred CCC
Q 017901 245 IGA 247 (364)
Q Consensus 245 ~g~ 247 (364)
.|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 874
No 351
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.11 Score=45.62 Aligned_cols=74 Identities=24% Similarity=0.395 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCc-eee--eCCChh-H---HHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAE-QAV--DYSSKD-I---ELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~-~v~--~~~~~~-~---~~~i~---g~~ 238 (364)
.+.+++|+|++|.+|..+++.+...|++|+.+.++.+. .. +.+.+.. ..+ |..+.+ . .+.+. +++
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 35789999999999999999999999999999876542 22 2223322 122 333322 2 22222 459
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|+++.+.|.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999999874
No 352
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=95.13 E-value=0.092 Score=48.78 Aligned_cols=85 Identities=19% Similarity=0.145 Sum_probs=54.6
Q ss_pred HHHHHHHHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHH----HHcC------Ccee-eeCC
Q 017901 160 LTAWRALKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRV----LAAG------AEQA-VDYS 226 (364)
Q Consensus 160 ~ta~~~l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~----~~~g------~~~v-~~~~ 226 (364)
+|||.-|+.+..+ .+++|+|+||+|-+|..++..+...|.+|+++.+.... ... ...+ ...+ .|..
T Consensus 1 ~~~~~~~~~~~~~-~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~ 79 (348)
T PRK15181 1 MTAYEELRTKLVL-APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIR 79 (348)
T ss_pred Cchhhhhhhcccc-cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCC
Confidence 3678776444444 44789999999999999999999999999999764321 111 1111 1111 1333
Q ss_pred Ch-hHHHHhcCCccEEEECCC
Q 017901 227 SK-DIELAIKGKFDAVLDTIG 246 (364)
Q Consensus 227 ~~-~~~~~i~g~~D~vid~~g 246 (364)
+. .+...+.+ +|+||.+.+
T Consensus 80 d~~~l~~~~~~-~d~ViHlAa 99 (348)
T PRK15181 80 KFTDCQKACKN-VDYVLHQAA 99 (348)
T ss_pred CHHHHHHHhhC-CCEEEECcc
Confidence 32 33344446 999999876
No 353
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.13 E-value=0.13 Score=44.44 Aligned_cols=70 Identities=14% Similarity=0.189 Sum_probs=47.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCce-eeeCCChh-HHH---HhcCCccEEEECCC
Q 017901 177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQ-AVDYSSKD-IEL---AIKGKFDAVLDTIG 246 (364)
Q Consensus 177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~-v~~~~~~~-~~~---~i~g~~D~vid~~g 246 (364)
+++|+||++++|...++.+...|++|+.+.++++. +...+++... ..|..+.+ +.+ .+.+++|+++.+.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence 58999999999999999998899999999876554 2334444432 23444432 222 22224899999865
No 354
>PRK06953 short chain dehydrogenase; Provisional
Probab=95.13 E-value=0.14 Score=44.14 Aligned_cols=72 Identities=25% Similarity=0.310 Sum_probs=49.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCc-eeeeCCChhH-HH---Hhc-CCccEEEECCCC
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAE-QAVDYSSKDI-EL---AIK-GKFDAVLDTIGA 247 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~-~v~~~~~~~~-~~---~i~-g~~D~vid~~g~ 247 (364)
++++|+|++|.+|..+++.+...|++|+.+.++.+. +.+...+.. ...|..+.+. .. .+. +++|++|.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 468999999999999999888889999999876553 444444443 2234444322 22 222 348999998875
No 355
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.13 E-value=0.11 Score=46.32 Aligned_cols=73 Identities=16% Similarity=0.260 Sum_probs=48.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCc---ee--eeCCChh-HHH--Hhc---CCc
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE---QA--VDYSSKD-IEL--AIK---GKF 238 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~---~v--~~~~~~~-~~~--~i~---g~~ 238 (364)
+.+++|+||+|.+|...+..+...|++|+++.++.+. +. ....+.+ ++ .|..+.+ +.. .+. +++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 5689999999999999999998999999999876543 22 2222221 12 2443332 221 111 458
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|+++.|.|.
T Consensus 83 d~vv~~ag~ 91 (280)
T PRK06914 83 DLLVNNAGY 91 (280)
T ss_pred eEEEECCcc
Confidence 999999875
No 356
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=95.13 E-value=0.051 Score=48.23 Aligned_cols=72 Identities=24% Similarity=0.390 Sum_probs=47.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCc-eeeeCCCh-hH---HHHhc---CCccEEEECC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSK-DI---ELAIK---GKFDAVLDTI 245 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~-~v~~~~~~-~~---~~~i~---g~~D~vid~~ 245 (364)
.+++++|+|++|.+|..+++.+...|++|+.+.++..... ..... ...|..+. ++ .+.+. +++|++|.+.
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~A 85 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNA 85 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 4678999999999999999999999999998876554311 01111 12233333 22 22221 5599999998
Q ss_pred CC
Q 017901 246 GA 247 (364)
Q Consensus 246 g~ 247 (364)
|.
T Consensus 86 g~ 87 (266)
T PRK06171 86 GI 87 (266)
T ss_pred cc
Confidence 84
No 357
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.12 E-value=0.14 Score=45.82 Aligned_cols=74 Identities=27% Similarity=0.412 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCc-ee--eeCCChh-H---HHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAE-QA--VDYSSKD-I---ELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~-~v--~~~~~~~-~---~~~i~---g~~ 238 (364)
.+++++|+|++|++|..+++.+...|++|+.+.++++. .. +.+.+.. .. .|..+.+ . .+.+. +++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 46889999999999999999999999999998876542 22 2223322 11 2333322 2 22221 459
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 89 d~li~~ag~ 97 (278)
T PRK08277 89 DILINGAGG 97 (278)
T ss_pred CEEEECCCC
Confidence 999999883
No 358
>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=95.11 E-value=0.2 Score=49.29 Aligned_cols=88 Identities=19% Similarity=0.134 Sum_probs=64.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET--- 250 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~--- 250 (364)
.|+++.|.| .|.+|...++.++.+|.+|++..+....+...+.|+..+ ++.+.+.. .|+|+-++.....
T Consensus 139 ~gktvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~------~l~ell~~-aDiV~l~lP~t~~t~~ 210 (526)
T PRK13581 139 YGKTLGIIG-LGRIGSEVAKRAKAFGMKVIAYDPYISPERAAQLGVELV------SLDELLAR-ADFITLHTPLTPETRG 210 (526)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEE------cHHHHHhh-CCEEEEccCCChHhhc
Confidence 478999999 899999999999999999999876544444455565422 23334444 8999998886422
Q ss_pred -H-HHHHhhccCCCEEEEEcc
Q 017901 251 -E-RLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 251 -~-~~~~~~l~~~G~~v~~g~ 269 (364)
+ ...+..|+++..+|.++-
T Consensus 211 li~~~~l~~mk~ga~lIN~aR 231 (526)
T PRK13581 211 LIGAEELAKMKPGVRIINCAR 231 (526)
T ss_pred CcCHHHHhcCCCCeEEEECCC
Confidence 2 456788899988887763
No 359
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=95.11 E-value=0.22 Score=42.88 Aligned_cols=92 Identities=26% Similarity=0.381 Sum_probs=62.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH----HcCCceeeeCCChhHHHHhc--CCccEEEE--
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL----AAGAEQAVDYSSKDIELAIK--GKFDAVLD-- 243 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~----~~g~~~v~~~~~~~~~~~i~--g~~D~vid-- 243 (364)
-+|.+||=.|++| |++..-+|+ .|++|+++.-+++. +.++ +-|.. ++|......+... ++||+|+.
T Consensus 58 l~g~~vLDvGCGg--G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~~~FDvV~cmE 132 (243)
T COG2227 58 LPGLRVLDVGCGG--GILSEPLAR-LGASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLASAGGQFDVVTCME 132 (243)
T ss_pred CCCCeEEEecCCc--cHhhHHHHH-CCCeeEEecCChHHHHHHHHhhhhcccc--ccchhhhHHHHHhcCCCccEEEEhh
Confidence 4788999999554 566666665 48999999777664 4433 33332 5566554444333 46999876
Q ss_pred ---CCCCch-hHHHHHhhccCCCEEEEEcc
Q 017901 244 ---TIGAPE-TERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 244 ---~~g~~~-~~~~~~~~l~~~G~~v~~g~ 269 (364)
-+..+. .+..+.++++|+|.++.--.
T Consensus 133 VlEHv~dp~~~~~~c~~lvkP~G~lf~STi 162 (243)
T COG2227 133 VLEHVPDPESFLRACAKLVKPGGILFLSTI 162 (243)
T ss_pred HHHccCCHHHHHHHHHHHcCCCcEEEEecc
Confidence 466553 57789999999999876643
No 360
>PRK07574 formate dehydrogenase; Provisional
Probab=95.08 E-value=0.24 Score=46.46 Aligned_cols=89 Identities=16% Similarity=0.118 Sum_probs=63.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH-
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE- 251 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~- 251 (364)
.|.+|.|.| .|.+|..+++.++.+|.+|++..+... .+.....|.... .++.+.+.. .|+|+-++......
T Consensus 191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~-----~~l~ell~~-aDvV~l~lPlt~~T~ 263 (385)
T PRK07574 191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYH-----VSFDSLVSV-CDVVTIHCPLHPETE 263 (385)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceec-----CCHHHHhhc-CCEEEEcCCCCHHHH
Confidence 568899999 899999999999999999999877653 233344553211 134444445 89999988854322
Q ss_pred ----HHHHhhccCCCEEEEEcc
Q 017901 252 ----RLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 252 ----~~~~~~l~~~G~~v~~g~ 269 (364)
...+..|+++..+|.++-
T Consensus 264 ~li~~~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 264 HLFDADVLSRMKRGSYLVNTAR 285 (385)
T ss_pred HHhCHHHHhcCCCCcEEEECCC
Confidence 356788999988887763
No 361
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.08 E-value=0.1 Score=42.51 Aligned_cols=73 Identities=22% Similarity=0.313 Sum_probs=45.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCC--cc-H-HH---HHHcCCce-ee--eCCCh-h---HHHHhc---CC
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGS--KS-I-DR---VLAAGAEQ-AV--DYSSK-D---IELAIK---GK 237 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~--~~-~-~~---~~~~g~~~-v~--~~~~~-~---~~~~i~---g~ 237 (364)
++++|+||++++|...++.+...|+ +|+.+.++ .. . +. +...+... ++ |..+. + +.+.+. ++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4789999999999999999988877 55666666 22 2 22 33344321 22 32332 2 222222 56
Q ss_pred ccEEEECCCCc
Q 017901 238 FDAVLDTIGAP 248 (364)
Q Consensus 238 ~D~vid~~g~~ 248 (364)
+|++|.|.|..
T Consensus 81 ld~li~~ag~~ 91 (167)
T PF00106_consen 81 LDILINNAGIF 91 (167)
T ss_dssp ESEEEEECSCT
T ss_pred ccccccccccc
Confidence 99999998864
No 362
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.07 E-value=0.12 Score=45.71 Aligned_cols=35 Identities=31% Similarity=0.448 Sum_probs=31.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~ 208 (364)
.+++++|+||++++|..++..+...|++|+.+.++
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~ 41 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNS 41 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 57899999999999999999999999999887553
No 363
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.14 Score=45.58 Aligned_cols=37 Identities=27% Similarity=0.377 Sum_probs=33.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS 210 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~ 210 (364)
.+++++|+|++|.+|..+++.+...|++|+.+.++.+
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~ 42 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPD 42 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3679999999999999999999999999999987654
No 364
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.14 Score=45.59 Aligned_cols=72 Identities=19% Similarity=0.291 Sum_probs=48.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH-HcCCc-e--eeeCCChh-HHH---Hhc---CCccEEEE
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL-AAGAE-Q--AVDYSSKD-IEL---AIK---GKFDAVLD 243 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~-~~g~~-~--v~~~~~~~-~~~---~i~---g~~D~vid 243 (364)
+++||+||+|.+|..+++.+...|.+|+++.++.+. +.+. ..+.. . ..|..+.+ +.. .+. +++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 579999999999999999998899999999887653 3332 22221 1 22333332 221 111 44899999
Q ss_pred CCCC
Q 017901 244 TIGA 247 (364)
Q Consensus 244 ~~g~ 247 (364)
+.|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 9874
No 365
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=95.04 E-value=0.12 Score=40.02 Aligned_cols=90 Identities=19% Similarity=0.221 Sum_probs=55.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCcc-H--HHHHHcC----Cc-eeeeCCChhHHHHhcCCccEEEECCCC
Q 017901 177 RLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKS-I--DRVLAAG----AE-QAVDYSSKDIELAIKGKFDAVLDTIGA 247 (364)
Q Consensus 177 ~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~-~--~~~~~~g----~~-~v~~~~~~~~~~~i~g~~D~vid~~g~ 247 (364)
+|.|.|++|.+|..+++++..+- ++++.+..++. . .+..... .. ..+... ..+.+.+ +|+||.|++.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~Dvvf~a~~~ 76 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDA---DPEELSD-VDVVFLALPH 76 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEET---SGHHHTT-ESEEEE-SCH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeec---chhHhhc-CCEEEecCch
Confidence 58899999999999999998764 46666644333 2 2222211 11 112111 1122234 9999999999
Q ss_pred chhHHHHHhhccCCCEEEEEccC
Q 017901 248 PETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 248 ~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.......-.+++.|-++|..+..
T Consensus 77 ~~~~~~~~~~~~~g~~ViD~s~~ 99 (121)
T PF01118_consen 77 GASKELAPKLLKAGIKVIDLSGD 99 (121)
T ss_dssp HHHHHHHHHHHHTTSEEEESSST
T ss_pred hHHHHHHHHHhhCCcEEEeCCHH
Confidence 84555555566777788888754
No 366
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=95.03 E-value=0.46 Score=37.00 Aligned_cols=90 Identities=16% Similarity=0.213 Sum_probs=60.6
Q ss_pred EEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCcc---H-HHHHHcCCceeeeCCCh---hHHHHh--------------
Q 017901 178 LLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKS---I-DRVLAAGAEQAVDYSSK---DIELAI-------------- 234 (364)
Q Consensus 178 vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~---~-~~~~~~g~~~v~~~~~~---~~~~~i-------------- 234 (364)
|.|.|++|.+|.-+.++.+.+. ++|++.+-..+ . +.++++.+..+.-.+.. .+.+..
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~~ 80 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGPE 80 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeChH
Confidence 5789999999999999999997 68888854333 2 55788887766544432 122211
Q ss_pred ------c-CCccEEEECCCCchhHHHHHhhccCCCEEEEE
Q 017901 235 ------K-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTL 267 (364)
Q Consensus 235 ------~-g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~ 267 (364)
. .++|+++.++-+...+.-.+.+++.|=++.+.
T Consensus 81 ~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaLA 120 (129)
T PF02670_consen 81 GLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIALA 120 (129)
T ss_dssp HHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE-
T ss_pred HHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEEe
Confidence 1 24999999888777888888888877666544
No 367
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.01 E-value=0.13 Score=45.28 Aligned_cols=74 Identities=24% Similarity=0.382 Sum_probs=49.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCc-e--eeeCCChh-HH---HHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-Q--AVDYSSKD-IE---LAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~-~--v~~~~~~~-~~---~~i~---g~~ 238 (364)
.+.+++|+|++|.+|..+++.+...|++|+.+.++.+. +. +...+.. . ..|..+.+ +. +.+. +++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 46899999999999999999999999999998876543 22 2233322 1 22333332 21 2221 448
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|.+|.+.|.
T Consensus 91 d~vi~~ag~ 99 (259)
T PRK08213 91 DILVNNAGA 99 (259)
T ss_pred CEEEECCCC
Confidence 999999874
No 368
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.99 E-value=0.13 Score=44.79 Aligned_cols=74 Identities=24% Similarity=0.378 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce-e--eeCCCh-hHHHHhc------CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ-A--VDYSSK-DIELAIK------GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~-v--~~~~~~-~~~~~i~------g~~ 238 (364)
.+.+++|.|++|.+|..++..+...|++|+.+.++... +. +...+... + .|..+. ++...+. +++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 35789999999999999999988899999999887543 22 22223221 1 233332 2222221 349
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999999875
No 369
>PLN00016 RNA-binding protein; Provisional
Probab=94.97 E-value=0.18 Score=47.47 Aligned_cols=95 Identities=23% Similarity=0.373 Sum_probs=62.1
Q ss_pred CCCEEEEE----cCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-----------HHHHcCCceeeeCCChhHHHHhc--
Q 017901 174 EGQRLLVL----GGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-----------RVLAAGAEQAVDYSSKDIELAIK-- 235 (364)
Q Consensus 174 ~g~~vli~----g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-----------~~~~~g~~~v~~~~~~~~~~~i~-- 235 (364)
...+|||+ ||+|.+|..+++.+...|.+|++++++... . .+...+... +..+-.++...+.
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~-v~~D~~d~~~~~~~~ 129 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKT-VWGDPADVKSKVAGA 129 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceE-EEecHHHHHhhhccC
Confidence 34679999 999999999999999999999999887542 1 112234432 2222223333333
Q ss_pred CCccEEEECCCCc-hhHHHHHhhccCCC--EEEEEccC
Q 017901 236 GKFDAVLDTIGAP-ETERLGLNFLKRGG--HYMTLHGE 270 (364)
Q Consensus 236 g~~D~vid~~g~~-~~~~~~~~~l~~~G--~~v~~g~~ 270 (364)
+ +|+||++.+.. ......++.++..| ++|.++..
T Consensus 130 ~-~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~ 166 (378)
T PLN00016 130 G-FDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA 166 (378)
T ss_pred C-ccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 4 99999998754 23455566665443 78877753
No 370
>PRK08264 short chain dehydrogenase; Validated
Probab=94.97 E-value=0.12 Score=45.00 Aligned_cols=72 Identities=21% Similarity=0.305 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccHHHHHHcCCc-ee--eeCCCh-hHHHHhc--CCccEEEECCC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSIDRVLAAGAE-QA--VDYSSK-DIELAIK--GKFDAVLDTIG 246 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~~~~~~~g~~-~v--~~~~~~-~~~~~i~--g~~D~vid~~g 246 (364)
.+.+++|+||+|.+|..+++.+...|+ +|+++.++.+.... .+.. .+ .|..+. ++...+. +++|++|.+.|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 82 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAG 82 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 467899999999999999999999999 99888876554211 2221 12 233332 2222222 34899999998
Q ss_pred C
Q 017901 247 A 247 (364)
Q Consensus 247 ~ 247 (364)
.
T Consensus 83 ~ 83 (238)
T PRK08264 83 I 83 (238)
T ss_pred c
Confidence 7
No 371
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.94 E-value=0.16 Score=44.68 Aligned_cols=36 Identities=22% Similarity=0.275 Sum_probs=31.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS 210 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~ 210 (364)
+++++|+|++|.+|..+++.+...|++|+.+.++..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~ 37 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSE 37 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHH
Confidence 568999999999999999999889999999887654
No 372
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=94.92 E-value=0.16 Score=46.03 Aligned_cols=73 Identities=23% Similarity=0.361 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH----HHHHHcCC-c---eee--eCCC-hhHHHHhcCCccEEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI----DRVLAAGA-E---QAV--DYSS-KDIELAIKGKFDAVL 242 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~----~~~~~~g~-~---~v~--~~~~-~~~~~~i~g~~D~vi 242 (364)
.+.+|+|+||+|-+|...+..+...|++|.+++|+.+. +.++++.. . .++ |-.+ .++.+.+.| +|.||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~g-cdgVf 83 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDG-CDGVF 83 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhC-CCEEE
Confidence 57899999999999999999999999999999987653 24555552 2 122 2222 356777778 99999
Q ss_pred ECCCC
Q 017901 243 DTIGA 247 (364)
Q Consensus 243 d~~g~ 247 (364)
-+...
T Consensus 84 H~Asp 88 (327)
T KOG1502|consen 84 HTASP 88 (327)
T ss_pred EeCcc
Confidence 87653
No 373
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=94.92 E-value=0.19 Score=45.76 Aligned_cols=90 Identities=19% Similarity=0.175 Sum_probs=61.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch---
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE--- 249 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~--- 249 (364)
.+|.|.| .|.+|...+..++..|. +|++..++++. +.+.+.|...... .+..+.+.+ +|+||.|+....
T Consensus 7 ~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~~~~~~~~-aDvViiavp~~~~~~ 81 (307)
T PRK07502 7 DRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT---TSAAEAVKG-ADLVILCVPVGASGA 81 (307)
T ss_pred cEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec---CCHHHHhcC-CCEEEECCCHHHHHH
Confidence 5799999 89999999999888885 78877776554 6666777532111 122333445 999999999752
Q ss_pred hHHHHHhhccCCCEEEEEccC
Q 017901 250 TERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 250 ~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.+......++++..++.+|..
T Consensus 82 v~~~l~~~l~~~~iv~dvgs~ 102 (307)
T PRK07502 82 VAAEIAPHLKPGAIVTDVGSV 102 (307)
T ss_pred HHHHHHhhCCCCCEEEeCccc
Confidence 233444567788877777653
No 374
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=94.91 E-value=0.36 Score=40.42 Aligned_cols=96 Identities=17% Similarity=0.170 Sum_probs=56.2
Q ss_pred hcccCCCCEEEEEcCCchHHHHHHHHHHHc-C-CeEEEeeCCccHHHHHHcCCcee-eeCCChhHHHH----hc-CCccE
Q 017901 169 AARMSEGQRLLVLGGGGAVGFAAVQFSVAS-G-CHVSATCGSKSIDRVLAAGAEQA-VDYSSKDIELA----IK-GKFDA 240 (364)
Q Consensus 169 ~~~~~~g~~vli~g~~g~~G~~~~~~a~~~-g-~~vi~~~~~~~~~~~~~~g~~~v-~~~~~~~~~~~----i~-g~~D~ 240 (364)
...+++|++||..| +|.-++ +..+++.. + .+|+++..++.. ...+...+ .|..+....+. .. +++|+
T Consensus 27 ~~~i~~g~~VLDiG-~GtG~~-~~~l~~~~~~~~~v~~vDis~~~---~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D~ 101 (188)
T TIGR00438 27 FKLIKPGDTVLDLG-AAPGGW-SQVAVEQVGGKGRVIAVDLQPMK---PIENVDFIRGDFTDEEVLNKIRERVGDDKVDV 101 (188)
T ss_pred hcccCCCCEEEEec-CCCCHH-HHHHHHHhCCCceEEEEeccccc---cCCCceEEEeeCCChhHHHHHHHHhCCCCccE
Confidence 34568999999999 555454 44444443 3 479999666543 11233211 13322222221 22 34999
Q ss_pred EEE-C----CCC------------chhHHHHHhhccCCCEEEEEcc
Q 017901 241 VLD-T----IGA------------PETERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 241 vid-~----~g~------------~~~~~~~~~~l~~~G~~v~~g~ 269 (364)
|+. . .|. ...+..+.++|++||+++....
T Consensus 102 V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~~ 147 (188)
T TIGR00438 102 VMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKVF 147 (188)
T ss_pred EEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 995 2 222 2367788999999999998653
No 375
>PRK07069 short chain dehydrogenase; Validated
Probab=94.91 E-value=0.31 Score=42.58 Aligned_cols=31 Identities=23% Similarity=0.262 Sum_probs=28.6
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCeEEEeeCC
Q 017901 178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGS 208 (364)
Q Consensus 178 vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~ 208 (364)
++|+|++|.+|...++.+...|++|+.+.++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~ 32 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDIN 32 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 7999999999999999998899999999876
No 376
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=94.89 E-value=0.18 Score=40.97 Aligned_cols=87 Identities=9% Similarity=0.145 Sum_probs=54.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhH-HHHhcCCccEEEECCCCchhHH
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDI-ELAIKGKFDAVLDTIGAPETER 252 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~-~~~i~g~~D~vid~~g~~~~~~ 252 (364)
.|.+|+|.| +|.+|.--++.+...|++|+.+. ++..+.+.+++.-. +.. ..+ ...+.+ +|+||-+++.+ .++
T Consensus 12 ~~~~vlVvG-GG~va~rka~~Ll~~ga~V~VIs-p~~~~~l~~l~~i~-~~~--~~~~~~dl~~-a~lViaaT~d~-e~N 84 (157)
T PRK06719 12 HNKVVVIIG-GGKIAYRKASGLKDTGAFVTVVS-PEICKEMKELPYIT-WKQ--KTFSNDDIKD-AHLIYAATNQH-AVN 84 (157)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEc-CccCHHHHhccCcE-EEe--cccChhcCCC-ceEEEECCCCH-HHH
Confidence 578899999 79999999998888999998773 33334444454211 111 111 112335 99999999998 555
Q ss_pred HHHhhccCCCEEEEE
Q 017901 253 LGLNFLKRGGHYMTL 267 (364)
Q Consensus 253 ~~~~~l~~~G~~v~~ 267 (364)
..+...+..+.++..
T Consensus 85 ~~i~~~a~~~~~vn~ 99 (157)
T PRK06719 85 MMVKQAAHDFQWVNV 99 (157)
T ss_pred HHHHHHHHHCCcEEE
Confidence 544444433334443
No 377
>PLN03075 nicotianamine synthase; Provisional
Probab=94.89 E-value=0.25 Score=44.36 Aligned_cols=95 Identities=9% Similarity=0.067 Sum_probs=62.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCccH-HHHHH-----cCCceeeeCCChhHHHHh--cCCccEEE
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKSI-DRVLA-----AGAEQAVDYSSKDIELAI--KGKFDAVL 242 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~~-~~~~~-----~g~~~v~~~~~~~~~~~i--~g~~D~vi 242 (364)
.++++|+-.| +|+.|+.++-+++.+ +.+++.+..+++. +.+++ .|...-+.....+..+.. .+++|+||
T Consensus 122 ~~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l~~FDlVF 200 (296)
T PLN03075 122 GVPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESLKEYDVVF 200 (296)
T ss_pred CCCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhcccccCCcCEEE
Confidence 3779999999 899999888888655 3478888777654 44433 332222222222222211 13499998
Q ss_pred ECC------CC-chhHHHHHhhccCCCEEEEEc
Q 017901 243 DTI------GA-PETERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 243 d~~------g~-~~~~~~~~~~l~~~G~~v~~g 268 (364)
-.+ .. ...+....+.|++||.++.-.
T Consensus 201 ~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 201 LAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred EecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 874 22 247889999999999998775
No 378
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.87 E-value=0.16 Score=44.99 Aligned_cols=74 Identities=20% Similarity=0.351 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H---HHHHcCCce---eeeCCChh----HHHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D---RVLAAGAEQ---AVDYSSKD----IELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~---~~~~~g~~~---v~~~~~~~----~~~~i~---g~~ 238 (364)
.+++++|+|+++.+|..++..+...|++|+.+.++.+. + .+.+.+... ..|..+.+ +.+.+. +++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 56789999999999999999888899999888776543 2 223334321 12333321 222222 458
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999885
No 379
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=94.87 E-value=0.24 Score=44.28 Aligned_cols=93 Identities=17% Similarity=0.156 Sum_probs=58.5
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcC---CceeeeCCChhHHHHhcCCccEEEECC
Q 017901 171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAG---AEQAVDYSSKDIELAIKGKFDAVLDTI 245 (364)
Q Consensus 171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g---~~~v~~~~~~~~~~~i~g~~D~vid~~ 245 (364)
....+++++|.| +|++|.+++..+...|++|+.+.++.++ +++.++. ....... .+.....+|+||+|+
T Consensus 113 ~~~~~k~vliiG-aGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~-----~~~~~~~~DivInat 186 (270)
T TIGR00507 113 PLRPNQRVLIIG-AGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSM-----DELPLHRVDLIINAT 186 (270)
T ss_pred CCccCCEEEEEc-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEech-----hhhcccCccEEEECC
Confidence 345578999999 5899999999888889988888776543 3333332 2122211 111112389999999
Q ss_pred CCc--hhH---HHHHhhccCCCEEEEEcc
Q 017901 246 GAP--ETE---RLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 246 g~~--~~~---~~~~~~l~~~G~~v~~g~ 269 (364)
+.. ... ......++++..++.+..
T Consensus 187 p~gm~~~~~~~~~~~~~l~~~~~v~D~~y 215 (270)
T TIGR00507 187 SAGMSGNIDEPPVPAEKLKEGMVVYDMVY 215 (270)
T ss_pred CCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence 864 111 112456778877777753
No 380
>PRK09135 pteridine reductase; Provisional
Probab=94.86 E-value=0.22 Score=43.39 Aligned_cols=36 Identities=22% Similarity=0.305 Sum_probs=32.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK 209 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~ 209 (364)
.+.+++|+|++|.+|..+++.+...|++|+++.++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~ 40 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRS 40 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence 457899999999999999999988999999998753
No 381
>PLN03139 formate dehydrogenase; Provisional
Probab=94.85 E-value=0.25 Score=46.32 Aligned_cols=89 Identities=18% Similarity=0.198 Sum_probs=63.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH-
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE- 251 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~- 251 (364)
.|++|.|.| .|.+|...++.++.+|.+|++..+... .+...+.|+..+ .++.+.+.. .|+|+-++......
T Consensus 198 ~gktVGIVG-~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~-----~~l~ell~~-sDvV~l~lPlt~~T~ 270 (386)
T PLN03139 198 EGKTVGTVG-AGRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFE-----EDLDAMLPK-CDVVVINTPLTEKTR 270 (386)
T ss_pred CCCEEEEEe-ecHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceec-----CCHHHHHhh-CCEEEEeCCCCHHHH
Confidence 578999999 899999999999999999988766543 234445554321 134444444 89999888854222
Q ss_pred ----HHHHhhccCCCEEEEEcc
Q 017901 252 ----RLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 252 ----~~~~~~l~~~G~~v~~g~ 269 (364)
...+..|+++..+|.++-
T Consensus 271 ~li~~~~l~~mk~ga~lIN~aR 292 (386)
T PLN03139 271 GMFNKERIAKMKKGVLIVNNAR 292 (386)
T ss_pred HHhCHHHHhhCCCCeEEEECCC
Confidence 356788899988888773
No 382
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.84 E-value=0.1 Score=52.65 Aligned_cols=73 Identities=16% Similarity=0.271 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc----------------------HHHHHHcCCceeeeCCC---h
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS----------------------IDRVLAAGAEQAVDYSS---K 228 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~----------------------~~~~~~~g~~~v~~~~~---~ 228 (364)
.+++|+|.| +|+.|+.++..++..|.+|+.+.+.+. .+.+.++|++..++... .
T Consensus 309 ~~kkVaIIG-~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIG-AGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 489999999 899999999999999999888765432 24567788776555421 1
Q ss_pred hHHHHhcCCccEEEECCCCc
Q 017901 229 DIELAIKGKFDAVLDTIGAP 248 (364)
Q Consensus 229 ~~~~~i~g~~D~vid~~g~~ 248 (364)
++.+...+ +|.||.++|..
T Consensus 388 ~~~~l~~~-~DaV~latGa~ 406 (639)
T PRK12809 388 TFSDLTSE-YDAVFIGVGTY 406 (639)
T ss_pred CHHHHHhc-CCEEEEeCCCC
Confidence 23222235 99999999975
No 383
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.83 E-value=0.16 Score=44.39 Aligned_cols=39 Identities=21% Similarity=0.281 Sum_probs=34.3
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901 172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS 210 (364)
Q Consensus 172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~ 210 (364)
..++.+++|.|++|.+|..+++.+...|++|+++.++..
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~ 47 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEE 47 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHH
Confidence 457889999999999999999999889999999987654
No 384
>PRK08703 short chain dehydrogenase; Provisional
Probab=94.81 E-value=0.12 Score=45.03 Aligned_cols=38 Identities=18% Similarity=0.255 Sum_probs=33.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI 211 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~ 211 (364)
.+++++|+|++|++|..+++.+...|++|+.+.+++..
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~ 42 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKK 42 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHH
Confidence 45789999999999999999999999999999887653
No 385
>PRK08251 short chain dehydrogenase; Provisional
Probab=94.80 E-value=0.16 Score=44.36 Aligned_cols=36 Identities=17% Similarity=0.286 Sum_probs=31.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS 210 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~ 210 (364)
+++++|+|++|++|...++.+...|++|+.+.++..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~ 37 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTD 37 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHH
Confidence 468999999999999999988888999999887654
No 386
>PRK11579 putative oxidoreductase; Provisional
Probab=94.80 E-value=1.2 Score=41.34 Aligned_cols=136 Identities=14% Similarity=0.047 Sum_probs=78.9
Q ss_pred CEEEEEcCCchHHH-HHHH-HHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc-CCccEEEECCCCchhHH
Q 017901 176 QRLLVLGGGGAVGF-AAVQ-FSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK-GKFDAVLDTIGAPETER 252 (364)
Q Consensus 176 ~~vli~g~~g~~G~-~~~~-~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~-g~~D~vid~~g~~~~~~ 252 (364)
-++.|.| .|.+|. .... +.+.-++++.++++........+.+...++ .++.+.+. ..+|+|+.|+.......
T Consensus 5 irvgiiG-~G~i~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~~~~ell~~~~vD~V~I~tp~~~H~~ 79 (346)
T PRK11579 5 IRVGLIG-YGYASKTFHAPLIAGTPGLELAAVSSSDATKVKADWPTVTVV----SEPQHLFNDPNIDLIVIPTPNDTHFP 79 (346)
T ss_pred ceEEEEC-CCHHHHHHHHHHHhhCCCCEEEEEECCCHHHHHhhCCCCcee----CCHHHHhcCCCCCEEEEcCCcHHHHH
Confidence 3689999 788886 3444 344457899999776543322333222222 23444443 23999999999887788
Q ss_pred HHHhhccCCCEEEEEccCchhhhhccccccccchhhHHHHHHhhhhhhccceeEEEEEeccCHHHHHHHHHHHHcCCce
Q 017901 253 LGLNFLKRGGHYMTLHGETAALADHYGLALGLPIATTVLLKKRMQTWYSYGIDYSYIYMRADAEGLEEIRRLSETGKLK 331 (364)
Q Consensus 253 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~ 331 (364)
.+..+++.|= =|++-.+.. .+......-......+++.+.-.+..+....+..+.+++++|.|-
T Consensus 80 ~~~~al~aGk-hVl~EKPla--------------~t~~ea~~l~~~a~~~g~~l~v~~~~R~~p~~~~~k~~i~~g~iG 143 (346)
T PRK11579 80 LAKAALEAGK-HVVVDKPFT--------------VTLSQARELDALAKSAGRVLSVFHNRRWDSDFLTLKALLAEGVLG 143 (346)
T ss_pred HHHHHHHCCC-eEEEeCCCC--------------CCHHHHHHHHHHHHHhCCEEEEEeeccCCHHHHHHHHHHhcCCCC
Confidence 8888887764 456665411 001111111112233455554444343456788888999998764
No 387
>PLN02780 ketoreductase/ oxidoreductase
Probab=94.80 E-value=0.12 Score=47.42 Aligned_cols=38 Identities=16% Similarity=0.116 Sum_probs=34.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI 211 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~ 211 (364)
.|++++|+||++++|...++.+...|++|+.+.++++.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~ 89 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDK 89 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHH
Confidence 58899999999999999999888899999999887653
No 388
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=94.79 E-value=0.043 Score=49.27 Aligned_cols=66 Identities=26% Similarity=0.321 Sum_probs=45.3
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCC
Q 017901 178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGA 247 (364)
Q Consensus 178 vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~ 247 (364)
|||+||+|.+|..+++.+...|.+|+++.++... ......+ +.+.........+.+ +|+||.+.+.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~D~Vvh~a~~ 67 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEG---YKPWAPLAESEALEG-ADAVINLAGE 67 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccccee---eecccccchhhhcCC-CCEEEECCCC
Confidence 6899999999999999998899999999886553 2111111 111112233344446 9999999975
No 389
>PRK12747 short chain dehydrogenase; Provisional
Probab=94.78 E-value=0.42 Score=41.90 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=29.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEee
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATC 206 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~ 206 (364)
.+++++|+|+++++|..+++.+...|++|+...
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~ 35 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHY 35 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEc
Confidence 467999999999999999999999999988764
No 390
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=94.77 E-value=0.26 Score=45.18 Aligned_cols=87 Identities=13% Similarity=0.103 Sum_probs=61.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHH-HcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH-
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSV-ASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE- 251 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~-~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~- 251 (364)
.|+++.|.| .|.+|...++.++ .+|.+|++..+....+.....+... .++.+.+.. .|+|+-++.-.+..
T Consensus 144 ~gktvGIiG-~G~IG~~va~~l~~~fgm~V~~~~~~~~~~~~~~~~~~~------~~l~ell~~-sDvv~lh~plt~~T~ 215 (323)
T PRK15409 144 HHKTLGIVG-MGRIGMALAQRAHFGFNMPILYNARRHHKEAEERFNARY------CDLDTLLQE-SDFVCIILPLTDETH 215 (323)
T ss_pred CCCEEEEEc-ccHHHHHHHHHHHhcCCCEEEEECCCCchhhHHhcCcEe------cCHHHHHHh-CCEEEEeCCCChHHh
Confidence 578999999 8999999999998 8999999876553333333444321 134444444 89988877753221
Q ss_pred ----HHHHhhccCCCEEEEEc
Q 017901 252 ----RLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 252 ----~~~~~~l~~~G~~v~~g 268 (364)
...+..|+++..+|.++
T Consensus 216 ~li~~~~l~~mk~ga~lIN~a 236 (323)
T PRK15409 216 HLFGAEQFAKMKSSAIFINAG 236 (323)
T ss_pred hccCHHHHhcCCCCeEEEECC
Confidence 36778899998888776
No 391
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=94.76 E-value=0.18 Score=46.03 Aligned_cols=73 Identities=19% Similarity=0.303 Sum_probs=49.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcC-CeEEEeeCCccH--HHHHHcCC---c-ee--eeCCChh----HHHHhc---CCc
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASG-CHVSATCGSKSI--DRVLAAGA---E-QA--VDYSSKD----IELAIK---GKF 238 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g-~~vi~~~~~~~~--~~~~~~g~---~-~v--~~~~~~~----~~~~i~---g~~ 238 (364)
+.+++|+|+++++|..+++.+...| ++|+.++++++. +...+++. . .+ .|..+.+ +.+.+. +++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5689999999999999999888889 899998877653 23333331 1 11 2433322 223322 459
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999999874
No 392
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=94.74 E-value=0.22 Score=46.34 Aligned_cols=75 Identities=24% Similarity=0.317 Sum_probs=48.7
Q ss_pred CCCCEEEEEcCCchHHHH--HHHHHHHcCCeEEEeeCCc---c--------------HHHHHHcCCc-eee--eCCCh--
Q 017901 173 SEGQRLLVLGGGGAVGFA--AVQFSVASGCHVSATCGSK---S--------------IDRVLAAGAE-QAV--DYSSK-- 228 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~--~~~~a~~~g~~vi~~~~~~---~--------------~~~~~~~g~~-~v~--~~~~~-- 228 (364)
..|+++||+|+++++|++ .++.+ ..|++++++.... + .+.+.+.|.. ..+ |..+.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 456899999999999999 56666 7899988886321 1 1234555643 222 33332
Q ss_pred --hHHHHhc---CCccEEEECCCCc
Q 017901 229 --DIELAIK---GKFDAVLDTIGAP 248 (364)
Q Consensus 229 --~~~~~i~---g~~D~vid~~g~~ 248 (364)
.+.+.+. |++|+++.+++.+
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccC
Confidence 2223332 6699999999876
No 393
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.74 E-value=0.23 Score=43.66 Aligned_cols=73 Identities=25% Similarity=0.286 Sum_probs=48.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc--ee--eeCCChh-HHHHhc------CCccEE
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE--QA--VDYSSKD-IELAIK------GKFDAV 241 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~--~v--~~~~~~~-~~~~i~------g~~D~v 241 (364)
+++++|+|++|.+|..++..+...|++|+++.++... ....++... +. .|..+.+ +...+. +++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4689999999999999999988899999999876553 223333211 12 2333322 212111 348999
Q ss_pred EECCCC
Q 017901 242 LDTIGA 247 (364)
Q Consensus 242 id~~g~ 247 (364)
|.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999985
No 394
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.73 E-value=0.21 Score=43.69 Aligned_cols=74 Identities=24% Similarity=0.466 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCc-eee--eCCCh-hHHHHh---c---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAE-QAV--DYSSK-DIELAI---K---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~-~v~--~~~~~-~~~~~i---~---g~~ 238 (364)
++.++||+||+|.+|..+++.+...|++|+.+.++... .. +.+.+.. .++ |..+. ++...+ . +++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46789999999999999999999999999998776543 21 2222322 122 33332 222222 1 458
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 82 d~vi~~ag~ 90 (250)
T TIGR03206 82 DVLVNNAGW 90 (250)
T ss_pred CEEEECCCC
Confidence 999999973
No 395
>PRK07023 short chain dehydrogenase; Provisional
Probab=94.71 E-value=0.3 Score=42.61 Aligned_cols=71 Identities=20% Similarity=0.239 Sum_probs=46.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCce---eeeCCChh-HHH---H-h----c--CCccEEE
Q 017901 177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQ---AVDYSSKD-IEL---A-I----K--GKFDAVL 242 (364)
Q Consensus 177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~---v~~~~~~~-~~~---~-i----~--g~~D~vi 242 (364)
+++|+|++|.+|..+++.+...|++|+.+.++.........+... ..|..+.+ +.. . + . ++.|++|
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 82 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLI 82 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEE
Confidence 689999999999999999988999999988765543333333221 22333322 221 1 1 1 2478999
Q ss_pred ECCCC
Q 017901 243 DTIGA 247 (364)
Q Consensus 243 d~~g~ 247 (364)
.+.|.
T Consensus 83 ~~ag~ 87 (243)
T PRK07023 83 NNAGT 87 (243)
T ss_pred EcCcc
Confidence 98774
No 396
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.71 E-value=0.37 Score=43.33 Aligned_cols=96 Identities=18% Similarity=0.298 Sum_probs=67.9
Q ss_pred ccccchHHHHHHHHHHhccc-CCCCEEEEEcCCchHHHHHHHHHHH----cCCeEEEeeCCccHHHHHHcCCceeeeCCC
Q 017901 153 SAIPFAALTAWRALKCAARM-SEGQRLLVLGGGGAVGFAAVQFSVA----SGCHVSATCGSKSIDRVLAAGAEQAVDYSS 227 (364)
Q Consensus 153 a~~~~~~~ta~~~l~~~~~~-~~g~~vli~g~~g~~G~~~~~~a~~----~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~ 227 (364)
+..||+....+..|.. -++ -.|++++|.|.+..+|.=+..++.. .+++|+.+.+. +
T Consensus 137 ~~~PcTp~ail~ll~~-y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~------------------t 197 (295)
T PRK14174 137 CFVSCTPYGILELLGR-YNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSA------------------T 197 (295)
T ss_pred CcCCCCHHHHHHHHHH-hCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCC------------------c
Confidence 3456666666665643 343 4799999999999999988888765 57777765432 2
Q ss_pred hhHHHHhcCCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 228 KDIELAIKGKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 228 ~~~~~~i~g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.++.+.++. +|+++-++|.+.. -.-+++++|..+|.+|..
T Consensus 198 ~~l~~~~~~-ADIvI~Avg~~~l--i~~~~vk~GavVIDVgi~ 237 (295)
T PRK14174 198 KDIPSYTRQ-ADILIAAIGKARF--ITADMVKPGAVVIDVGIN 237 (295)
T ss_pred hhHHHHHHh-CCEEEEecCccCc--cCHHHcCCCCEEEEeecc
Confidence 233444444 9999999998833 335677999999999865
No 397
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=94.65 E-value=0.86 Score=39.47 Aligned_cols=90 Identities=16% Similarity=0.252 Sum_probs=59.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCe---EEEeeCC----ccH---------HHHHHcCCceeeeCCChhHHHHhcC
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCH---VSATCGS----KSI---------DRVLAAGAEQAVDYSSKDIELAIKG 236 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~---vi~~~~~----~~~---------~~~~~~g~~~v~~~~~~~~~~~i~g 236 (364)
-.+.+++|.| +|..|..++..+...|++ ++.+.++ .++ .++++.+... .+ .++.+.+.+
T Consensus 23 l~~~rvlvlG-AGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~---~~l~~~l~~ 97 (226)
T cd05311 23 IEEVKIVING-AGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG---GTLKEALKG 97 (226)
T ss_pred ccCCEEEEEC-chHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc---CCHHHHHhc
Confidence 4567999999 799999999999888985 6666665 221 2334443211 11 245556656
Q ss_pred CccEEEECCCCchhH-HHHHhhccCCCEEEEEcc
Q 017901 237 KFDAVLDTIGAPETE-RLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 237 ~~D~vid~~g~~~~~-~~~~~~l~~~G~~v~~g~ 269 (364)
+|++|.+++.. .+ ...++.++++..++....
T Consensus 98 -~dvlIgaT~~G-~~~~~~l~~m~~~~ivf~lsn 129 (226)
T cd05311 98 -ADVFIGVSRPG-VVKKEMIKKMAKDPIVFALAN 129 (226)
T ss_pred -CCEEEeCCCCC-CCCHHHHHhhCCCCEEEEeCC
Confidence 99999999843 33 467777778777665544
No 398
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.64 E-value=0.22 Score=45.38 Aligned_cols=74 Identities=24% Similarity=0.302 Sum_probs=48.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--H-H---HHHHcCCcee---eeCCChh----HHHHh--cCCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--I-D---RVLAAGAEQA---VDYSSKD----IELAI--KGKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--~-~---~~~~~g~~~v---~~~~~~~----~~~~i--~g~~ 238 (364)
.+++++|+|+++++|...++.+...|++|+...+... . + .++..|.... .|..+.+ +.+.+ .|++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999999988865322 1 2 2333343221 1333321 11111 1569
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 91 D~li~nAG~ 99 (306)
T PRK07792 91 DIVVNNAGI 99 (306)
T ss_pred CEEEECCCC
Confidence 999999885
No 399
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.63 E-value=0.19 Score=46.57 Aligned_cols=74 Identities=19% Similarity=0.169 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcC----Cce-eeeCCCh-hHHHHhcC-CccEEEEC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAG----AEQ-AVDYSSK-DIELAIKG-KFDAVLDT 244 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g----~~~-v~~~~~~-~~~~~i~g-~~D~vid~ 244 (364)
.|.++||+||+|.+|..+++.+...|.+|+++.++... .....++ ... ..|..+. ++.+.+.+ ++|+||.+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence 46889999999999999999999999999998765442 2212222 111 1233332 33333332 27999999
Q ss_pred CCC
Q 017901 245 IGA 247 (364)
Q Consensus 245 ~g~ 247 (364)
.+.
T Consensus 83 A~~ 85 (349)
T TIGR02622 83 AAQ 85 (349)
T ss_pred Ccc
Confidence 874
No 400
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=94.60 E-value=0.31 Score=43.87 Aligned_cols=92 Identities=16% Similarity=0.164 Sum_probs=55.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH--HHHHHcCC----ceeeeCCChhHHHHhcCCccEEEECC
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGA----EQAVDYSSKDIELAIKGKFDAVLDTI 245 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~--~~~~~~g~----~~v~~~~~~~~~~~i~g~~D~vid~~ 245 (364)
..+.+++|.| +|+.|.+++..+...|+ +++.+.++.++ .++..++. ..+... .++.+.+.+ +|+||+|+
T Consensus 125 ~~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~--~~~~~~~~~-aDiVInaT 200 (284)
T PRK12549 125 ASLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAG--SDLAAALAA-ADGLVHAT 200 (284)
T ss_pred ccCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEec--cchHhhhCC-CCEEEECC
Confidence 3568899999 79999999999999998 67777776554 33444321 122221 123333445 99999996
Q ss_pred CCc--h--hHHHHHhhccCCCEEEEEc
Q 017901 246 GAP--E--TERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 246 g~~--~--~~~~~~~~l~~~G~~v~~g 268 (364)
... . ........++++..++.+-
T Consensus 201 p~Gm~~~~~~~~~~~~l~~~~~v~Div 227 (284)
T PRK12549 201 PTGMAKHPGLPLPAELLRPGLWVADIV 227 (284)
T ss_pred cCCCCCCCCCCCCHHHcCCCcEEEEee
Confidence 432 0 1111234566666555554
No 401
>PRK09134 short chain dehydrogenase; Provisional
Probab=94.60 E-value=0.3 Score=43.03 Aligned_cols=74 Identities=16% Similarity=0.194 Sum_probs=47.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc-cH--HH---HHHcCCce---eeeCCChh-H---HHHhc---CC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK-SI--DR---VLAAGAEQ---AVDYSSKD-I---ELAIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~-~~--~~---~~~~g~~~---v~~~~~~~-~---~~~i~---g~ 237 (364)
.+.+++|+|++|.+|..+++.+...|++|+.+.+.. .. .. +...+... ..|..+.+ + .+.+. ++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 467899999999999999999988999998876533 22 12 22234321 22333322 1 22221 45
Q ss_pred ccEEEECCCC
Q 017901 238 FDAVLDTIGA 247 (364)
Q Consensus 238 ~D~vid~~g~ 247 (364)
+|++|.+.|.
T Consensus 88 iD~vi~~ag~ 97 (258)
T PRK09134 88 ITLLVNNASL 97 (258)
T ss_pred CCEEEECCcC
Confidence 8999999874
No 402
>PRK07775 short chain dehydrogenase; Provisional
Probab=94.58 E-value=0.28 Score=43.80 Aligned_cols=74 Identities=22% Similarity=0.329 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce-e--eeCCChh-H---HHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ-A--VDYSSKD-I---ELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~-v--~~~~~~~-~---~~~i~---g~~ 238 (364)
...+++|+||+|.+|..+++.+...|++|+++.++... +. +...+... . .|..+.+ + .+.+. +++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 34689999999999999999999999999988775432 11 23334321 1 2333322 2 22221 458
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 89 d~vi~~Ag~ 97 (274)
T PRK07775 89 EVLVSGAGD 97 (274)
T ss_pred CEEEECCCc
Confidence 999999875
No 403
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=94.57 E-value=0.22 Score=44.04 Aligned_cols=74 Identities=20% Similarity=0.297 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc-H-H----HHHHcCCce---eeeCCChh-H---HHHhc---CC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS-I-D----RVLAAGAEQ---AVDYSSKD-I---ELAIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~-~-~----~~~~~g~~~---v~~~~~~~-~---~~~i~---g~ 237 (364)
.+++++|+||+|.+|..+++.+...|++|+.+.++.. . . .++..+... ..|..+.+ + .+.+. ++
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999888766432 1 1 223334321 22333332 1 22221 45
Q ss_pred ccEEEECCCC
Q 017901 238 FDAVLDTIGA 247 (364)
Q Consensus 238 ~D~vid~~g~ 247 (364)
+|+++.+.|.
T Consensus 86 id~lv~~ag~ 95 (261)
T PRK08936 86 LDVMINNAGI 95 (261)
T ss_pred CCEEEECCCC
Confidence 9999999885
No 404
>TIGR01327 PGDH D-3-phosphoglycerate dehydrogenase. This model represents a long form of D-3-phosphoglycerate dehydrogenase, the serA gene of one pathway of serine biosynthesis. Shorter forms, scoring between trusted and noise cutoff, include SerA from E. coli.
Probab=94.56 E-value=0.32 Score=47.82 Aligned_cols=88 Identities=22% Similarity=0.150 Sum_probs=62.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET--- 250 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~--- 250 (364)
.|+++.|.| .|.+|...++.++.+|.+|++..+....+...++|...+ .++.+.+.. .|+|+-++...+.
T Consensus 137 ~gktvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~g~~~~-----~~l~ell~~-aDvV~l~lPlt~~T~~ 209 (525)
T TIGR01327 137 YGKTLGVIG-LGRIGSIVAKRAKAFGMKVLAYDPYISPERAEQLGVELV-----DDLDELLAR-ADFITVHTPLTPETRG 209 (525)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCChhHHHhcCCEEc-----CCHHHHHhh-CCEEEEccCCChhhcc
Confidence 568999999 999999999999999999999876433344455564311 123444444 8999988875422
Q ss_pred -H-HHHHhhccCCCEEEEEc
Q 017901 251 -E-RLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 251 -~-~~~~~~l~~~G~~v~~g 268 (364)
+ ...+..|+++..+|.++
T Consensus 210 li~~~~l~~mk~ga~lIN~a 229 (525)
T TIGR01327 210 LIGAEELAKMKKGVIIVNCA 229 (525)
T ss_pred CcCHHHHhcCCCCeEEEEcC
Confidence 1 35677888988888776
No 405
>PRK08655 prephenate dehydrogenase; Provisional
Probab=94.56 E-value=0.29 Score=47.00 Aligned_cols=87 Identities=21% Similarity=0.218 Sum_probs=60.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch---hH
Q 017901 177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE---TE 251 (364)
Q Consensus 177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~---~~ 251 (364)
+|.|.||.|.+|.+.+..++..|.+|++..++.+. +.+.+.|+. +. .+..+.+.+ +|+||-|+.... .+
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~-~~----~~~~e~~~~-aDvVIlavp~~~~~~vl 75 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVE-YA----NDNIDAAKD-ADIVIISVPINVTEDVI 75 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCe-ec----cCHHHHhcc-CCEEEEecCHHHHHHHH
Confidence 58899878999999999999999999888776554 455666753 11 123333444 899999988652 23
Q ss_pred HHHHhhccCCCEEEEEcc
Q 017901 252 RLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 252 ~~~~~~l~~~G~~v~~g~ 269 (364)
......++++..++.++.
T Consensus 76 ~~l~~~l~~~~iViDvsS 93 (437)
T PRK08655 76 KEVAPHVKEGSLLMDVTS 93 (437)
T ss_pred HHHHhhCCCCCEEEEccc
Confidence 344445667777777774
No 406
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.55 E-value=0.21 Score=43.88 Aligned_cols=74 Identities=18% Similarity=0.325 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-H---HHHcCCce---eeeCCChh-HHH---Hhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAAGAEQ---AVDYSSKD-IEL---AIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~---~~~~g~~~---v~~~~~~~-~~~---~i~---g~~ 238 (364)
.+++++|.|+++.+|..+++.+...|++++.+.++.+. + . +++.+... ..|..+.+ ..+ .+. +++
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999999999999999999999999988776543 2 1 22333321 23444332 222 111 458
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|+++.+.|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999999884
No 407
>PRK06701 short chain dehydrogenase; Provisional
Probab=94.53 E-value=0.23 Score=44.87 Aligned_cols=97 Identities=19% Similarity=0.283 Sum_probs=61.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--H-H---HHHHcCCce-e--eeCCChh-H---HHHhc---CC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--I-D---RVLAAGAEQ-A--VDYSSKD-I---ELAIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--~-~---~~~~~g~~~-v--~~~~~~~-~---~~~i~---g~ 237 (364)
.+.+++|+|++|.+|..+++.+...|++|+.+.++.. . . .+...+... + .|..+.+ + .+.+. ++
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~ 124 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR 124 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4688999999999999999999889999998876542 1 1 122333321 1 2333322 1 22221 45
Q ss_pred ccEEEECCCCch---h-----------------------HHHHHhhccCCCEEEEEccC
Q 017901 238 FDAVLDTIGAPE---T-----------------------ERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 238 ~D~vid~~g~~~---~-----------------------~~~~~~~l~~~G~~v~~g~~ 270 (364)
+|++|.+.|... . +..+.+.++++|++|.++..
T Consensus 125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~ 183 (290)
T PRK06701 125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSI 183 (290)
T ss_pred CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecc
Confidence 899999887420 0 12334555677899988754
No 408
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.52 E-value=0.24 Score=43.31 Aligned_cols=74 Identities=20% Similarity=0.346 Sum_probs=47.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEe-eCCccH--H---HHHHcCCce-e--eeCCChh-H---HHHhc---CC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSI--D---RVLAAGAEQ-A--VDYSSKD-I---ELAIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~-~~~~~~--~---~~~~~g~~~-v--~~~~~~~-~---~~~i~---g~ 237 (364)
++.+++|+||+|.+|..+++.+...|++|+.+ .++... + .+++.+... . .|..+.+ . .+.+. ++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999999999998775 444432 2 223334321 2 2333322 2 22221 45
Q ss_pred ccEEEECCCC
Q 017901 238 FDAVLDTIGA 247 (364)
Q Consensus 238 ~D~vid~~g~ 247 (364)
+|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (250)
T PRK08063 83 LDVFVNNAAS 92 (250)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 409
>PRK07402 precorrin-6B methylase; Provisional
Probab=94.51 E-value=1 Score=37.90 Aligned_cols=102 Identities=16% Similarity=0.174 Sum_probs=60.8
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HH----HHHcCCce--eeeCCChhHHHHhcCC
Q 017901 166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DR----VLAAGAEQ--AVDYSSKDIELAIKGK 237 (364)
Q Consensus 166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~----~~~~g~~~--v~~~~~~~~~~~i~g~ 237 (364)
+.....++++++|+=.|+ +.|..++.+++.. +.+|+++..+++. +. +.+++.+. ++..+..+..+.+...
T Consensus 32 l~~~l~~~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~ 109 (196)
T PRK07402 32 LISQLRLEPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPA 109 (196)
T ss_pred HHHhcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCC
Confidence 335567788898888773 3566666777654 5799999776653 33 34455432 3332222222222222
Q ss_pred ccE-EEECCCC-chhHHHHHhhccCCCEEEEEcc
Q 017901 238 FDA-VLDTIGA-PETERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 238 ~D~-vid~~g~-~~~~~~~~~~l~~~G~~v~~g~ 269 (364)
+|. +++.... ...+..+.+.|++||+++....
T Consensus 110 ~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 143 (196)
T PRK07402 110 PDRVCIEGGRPIKEILQAVWQYLKPGGRLVATAS 143 (196)
T ss_pred CCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence 455 4443222 2467899999999999988854
No 410
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.50 E-value=0.33 Score=42.15 Aligned_cols=74 Identities=28% Similarity=0.368 Sum_probs=47.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HH---HHHcCCce-ee--eCCChh-H---HHHhc---CC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DR---VLAAGAEQ-AV--DYSSKD-I---ELAIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~---~~~~g~~~-v~--~~~~~~-~---~~~i~---g~ 237 (364)
.+.+++|+|++|.+|..++..+...|++|+.+.++... .. +...+... .+ |..+.+ + .+.+. ++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35689999999999999999999999999777654431 11 22233221 22 333332 2 12221 34
Q ss_pred ccEEEECCCC
Q 017901 238 FDAVLDTIGA 247 (364)
Q Consensus 238 ~D~vid~~g~ 247 (364)
+|.+|.+.|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999999875
No 411
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.48 E-value=0.3 Score=41.23 Aligned_cols=75 Identities=21% Similarity=0.365 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-CchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCc-eeeeCCCh----hHHHHhc----CCccEE
Q 017901 174 EGQRLLVLGG-GGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAE-QAVDYSSK----DIELAIK----GKFDAV 241 (364)
Q Consensus 174 ~g~~vli~g~-~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~-~v~~~~~~----~~~~~i~----g~~D~v 241 (364)
..+.|+|.|+ .|++|.+++.-....|+.|+++.|.-+. ++..+.|.. .=+|.+++ .+..+++ |+.|+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 3467888875 7899999998888899999999887664 555577743 22344333 2333443 779999
Q ss_pred EECCCCc
Q 017901 242 LDTIGAP 248 (364)
Q Consensus 242 id~~g~~ 248 (364)
++..|.+
T Consensus 86 ~NNAG~~ 92 (289)
T KOG1209|consen 86 YNNAGQS 92 (289)
T ss_pred EcCCCCC
Confidence 9988864
No 412
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=94.47 E-value=0.16 Score=45.73 Aligned_cols=73 Identities=19% Similarity=0.119 Sum_probs=47.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH--HHHHHcCCce-eeeCCC-hhHHHHhcCCccEEEECCCCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAEQ-AVDYSS-KDIELAIKGKFDAVLDTIGAP 248 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~--~~~~~~g~~~-v~~~~~-~~~~~~i~g~~D~vid~~g~~ 248 (364)
.+++++|.| +|+.+.+++..+..+|+ +++.+.|+.++ +++.+++... +..... .++...+.. +|+||+|++..
T Consensus 124 ~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~-~DiVInaTp~g 201 (282)
T TIGR01809 124 AGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKA-AEVLVSTVPAD 201 (282)
T ss_pred CCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccC-CCEEEECCCCC
Confidence 578899999 79999999999999998 57777777554 4445443211 111111 122223334 99999998864
No 413
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=94.45 E-value=0.11 Score=46.65 Aligned_cols=56 Identities=18% Similarity=0.179 Sum_probs=47.0
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC----CccHHHHHHcCCceee
Q 017901 168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG----SKSIDRVLAAGAEQAV 223 (364)
Q Consensus 168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~----~~~~~~~~~~g~~~v~ 223 (364)
..+.+.||.++||-..+|..|...+.++...|+++|++.. .++...++.+|+.-+.
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~ 155 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIIL 155 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEe
Confidence 5578999999999999999999999999999999998843 2334778999987554
No 414
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.45 E-value=0.21 Score=45.66 Aligned_cols=73 Identities=29% Similarity=0.361 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH---H-cCC--c-eee--eCCCh-hHHHHhcCCccEEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL---A-AGA--E-QAV--DYSSK-DIELAIKGKFDAVL 242 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~---~-~g~--~-~v~--~~~~~-~~~~~i~g~~D~vi 242 (364)
.|++|+|+||+|.+|..+++.+...|.+|+++.++... +... . .+. . ..+ |..+. .+.+.+.+ +|+||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~-~d~vi 82 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEG-CDAVF 82 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhC-CCEEE
Confidence 47899999999999999999988899999988776542 2211 1 111 1 122 22222 34444556 99999
Q ss_pred ECCCC
Q 017901 243 DTIGA 247 (364)
Q Consensus 243 d~~g~ 247 (364)
.+.+.
T Consensus 83 h~A~~ 87 (322)
T PLN02986 83 HTASP 87 (322)
T ss_pred EeCCC
Confidence 98873
No 415
>PRK14967 putative methyltransferase; Provisional
Probab=94.41 E-value=0.52 Score=40.74 Aligned_cols=94 Identities=27% Similarity=0.317 Sum_probs=59.5
Q ss_pred hcccCCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HH----HHHcCCc-eeeeCCChhHHHHhc-CCccE
Q 017901 169 AARMSEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DR----VLAAGAE-QAVDYSSKDIELAIK-GKFDA 240 (364)
Q Consensus 169 ~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~----~~~~g~~-~v~~~~~~~~~~~i~-g~~D~ 240 (364)
...++++++||-.| +|. |..+..+++. ++ +|+++..++.. +. +...+.. .+++. ++.+... +++|+
T Consensus 31 ~~~~~~~~~vLDlG-cG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~---d~~~~~~~~~fD~ 104 (223)
T PRK14967 31 AEGLGPGRRVLDLC-TGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG---DWARAVEFRPFDV 104 (223)
T ss_pred hcccCCCCeEEEec-CCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC---chhhhccCCCeeE
Confidence 34578889999999 565 8888888875 55 89999776653 32 2334432 12222 2222222 34999
Q ss_pred EEECCCC---------------------------chhHHHHHhhccCCCEEEEEc
Q 017901 241 VLDTIGA---------------------------PETERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 241 vid~~g~---------------------------~~~~~~~~~~l~~~G~~v~~g 268 (364)
|+...+- ...+..+.+.|++||+++.+-
T Consensus 105 Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~ 159 (223)
T PRK14967 105 VVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ 159 (223)
T ss_pred EEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9875321 012456789999999998764
No 416
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=94.41 E-value=0.52 Score=42.80 Aligned_cols=90 Identities=21% Similarity=0.207 Sum_probs=64.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch--
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE-- 249 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~-- 249 (364)
-.|++|.|.| .|.+|...++.++..|.+|++..++... +.+...|+. +. ++.+.+.. .|+|+-++..+.
T Consensus 14 LkgKtVGIIG-~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~-v~-----sl~Eaak~-ADVV~llLPd~~t~ 85 (335)
T PRK13403 14 LQGKTVAVIG-YGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFE-VM-----SVSEAVRT-AQVVQMLLPDEQQA 85 (335)
T ss_pred hCcCEEEEEe-EcHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCE-EC-----CHHHHHhc-CCEEEEeCCChHHH
Confidence 3678999999 9999999999999999999887655332 455666763 21 34445545 999999988642
Q ss_pred -hH-HHHHhhccCCCEEEEEccC
Q 017901 250 -TE-RLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 250 -~~-~~~~~~l~~~G~~v~~g~~ 270 (364)
.+ ...+..|+++..+++..+.
T Consensus 86 ~V~~~eil~~MK~GaiL~f~hgf 108 (335)
T PRK13403 86 HVYKAEVEENLREGQMLLFSHGF 108 (335)
T ss_pred HHHHHHHHhcCCCCCEEEECCCc
Confidence 22 3467778888877665543
No 417
>PRK08317 hypothetical protein; Provisional
Probab=94.39 E-value=0.25 Score=42.81 Aligned_cols=98 Identities=21% Similarity=0.251 Sum_probs=62.4
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH-HHHHHc----CCc-eeeeCCChhHHHHhcCCcc
Q 017901 168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-DRVLAA----GAE-QAVDYSSKDIELAIKGKFD 239 (364)
Q Consensus 168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~-~~~~~~----g~~-~v~~~~~~~~~~~i~g~~D 239 (364)
+...+.++++||-.| +|. |..+..+++..+ .+++++..++.. +.+++. +.. .+...+..++. ...+.+|
T Consensus 13 ~~~~~~~~~~vLdiG-~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-~~~~~~D 89 (241)
T PRK08317 13 ELLAVQPGDRVLDVG-CGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLP-FPDGSFD 89 (241)
T ss_pred HHcCCCCCCEEEEeC-CCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCC-CCCCCce
Confidence 567888999999999 554 889999998873 589999776654 544443 111 11111111110 0113488
Q ss_pred EEEECC-----CC-chhHHHHHhhccCCCEEEEEc
Q 017901 240 AVLDTI-----GA-PETERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 240 ~vid~~-----g~-~~~~~~~~~~l~~~G~~v~~g 268 (364)
+|+... .. ...+..+.++|++||.++...
T Consensus 90 ~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 90 AVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred EEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 887632 22 246789999999999998765
No 418
>PRK07577 short chain dehydrogenase; Provisional
Probab=94.37 E-value=0.22 Score=43.11 Aligned_cols=69 Identities=22% Similarity=0.263 Sum_probs=46.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCc-eeeeCCCh-hHHHHhc-----CCccEEEECCCC
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAE-QAVDYSSK-DIELAIK-----GKFDAVLDTIGA 247 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~-~v~~~~~~-~~~~~i~-----g~~D~vid~~g~ 247 (364)
+++++|.|++|.+|..+++.+...|++|+++.++.... .... ...|..+. ++.+.+. .++|++|.+.|.
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~ 78 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNVGI 78 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCCC
Confidence 57899999999999999999999999999998765431 1111 12333333 2222221 238999999885
No 419
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=94.37 E-value=0.21 Score=43.32 Aligned_cols=32 Identities=41% Similarity=0.622 Sum_probs=29.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCG 207 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~ 207 (364)
++++|+|++|.+|..+++.+...|++|+++.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r 32 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCG 32 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 46899999999999999999999999999877
No 420
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.36 E-value=0.2 Score=44.43 Aligned_cols=74 Identities=18% Similarity=0.340 Sum_probs=47.3
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHcCCeEEEeeCCcc----H-HHHHHcCCcee--eeCCCh-h---HHHHhc---CC
Q 017901 174 EGQRLLVLGG--GGAVGFAAVQFSVASGCHVSATCGSKS----I-DRVLAAGAEQA--VDYSSK-D---IELAIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~--~g~~G~~~~~~a~~~g~~vi~~~~~~~----~-~~~~~~g~~~v--~~~~~~-~---~~~~i~---g~ 237 (364)
.+++++|+|| ++++|.++++.+...|++|+.+.+.++ . +...+++.... .|..+. + +.+.+. |+
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 4789999996 579999999999889999988754322 1 22233443222 233332 2 222222 56
Q ss_pred ccEEEECCCC
Q 017901 238 FDAVLDTIGA 247 (364)
Q Consensus 238 ~D~vid~~g~ 247 (364)
+|+++++.|.
T Consensus 85 iD~lvnnAG~ 94 (260)
T PRK06997 85 LDGLVHSIGF 94 (260)
T ss_pred CcEEEEcccc
Confidence 9999999874
No 421
>PLN02256 arogenate dehydrogenase
Probab=94.35 E-value=0.66 Score=42.17 Aligned_cols=95 Identities=21% Similarity=0.146 Sum_probs=63.8
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCC
Q 017901 168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGA 247 (364)
Q Consensus 168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~ 247 (364)
+..+-..+.+|.|.| .|.+|...+..++..|.+|+++.+++..+.+.+.|+.. .+ +..+.+...+|+||-|+..
T Consensus 29 ~~~~~~~~~kI~IIG-~G~mG~slA~~L~~~G~~V~~~d~~~~~~~a~~~gv~~---~~--~~~e~~~~~aDvVilavp~ 102 (304)
T PLN02256 29 EELEKSRKLKIGIVG-FGNFGQFLAKTFVKQGHTVLATSRSDYSDIAAELGVSF---FR--DPDDFCEEHPDVVLLCTSI 102 (304)
T ss_pred HhhccCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECccHHHHHHHcCCee---eC--CHHHHhhCCCCEEEEecCH
Confidence 334445667899999 89999999999888898999887776545566677632 11 2222222128999999987
Q ss_pred chhHHHHHh-----hccCCCEEEEEcc
Q 017901 248 PETERLGLN-----FLKRGGHYMTLHG 269 (364)
Q Consensus 248 ~~~~~~~~~-----~l~~~G~~v~~g~ 269 (364)
. .+...+. .++++..++.++.
T Consensus 103 ~-~~~~vl~~l~~~~l~~~~iviDv~S 128 (304)
T PLN02256 103 L-STEAVLRSLPLQRLKRSTLFVDVLS 128 (304)
T ss_pred H-HHHHHHHhhhhhccCCCCEEEecCC
Confidence 6 4443333 3557777777775
No 422
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=94.34 E-value=0.41 Score=43.83 Aligned_cols=89 Identities=19% Similarity=0.133 Sum_probs=63.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCc-hhH
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP-ETE 251 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~-~~~ 251 (364)
-.|+++.|.| .|.||.+.++.++.+|.+|+...+....+...+.++.++ . +.+.+.. .|++.-+.+.. ++.
T Consensus 144 l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~----~--l~ell~~-sDii~l~~Plt~~T~ 215 (324)
T COG1052 144 LRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYV----D--LDELLAE-SDIISLHCPLTPETR 215 (324)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCceec----c--HHHHHHh-CCEEEEeCCCChHHh
Confidence 3589999999 999999999999999999999987765333344444322 1 3333334 88887766643 222
Q ss_pred ----HHHHhhccCCCEEEEEcc
Q 017901 252 ----RLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 252 ----~~~~~~l~~~G~~v~~g~ 269 (364)
...+..|++++.+|.++-
T Consensus 216 hLin~~~l~~mk~ga~lVNtaR 237 (324)
T COG1052 216 HLINAEELAKMKPGAILVNTAR 237 (324)
T ss_pred hhcCHHHHHhCCCCeEEEECCC
Confidence 467788999999988873
No 423
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=94.32 E-value=0.91 Score=38.50 Aligned_cols=80 Identities=20% Similarity=0.162 Sum_probs=48.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH-HHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET 250 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~-~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~ 250 (364)
-.|.+++|.| .|.+|..+++.+...|++|++..++.+. .. ...+|+. .++. .++.. .++|+++-|..+...
T Consensus 26 l~gk~v~I~G-~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~--~~l~~---~~~Dv~vp~A~~~~I 98 (200)
T cd01075 26 LEGKTVAVQG-LGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAP--EEIYS---VDADVFAPCALGGVI 98 (200)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcc--hhhcc---ccCCEEEeccccccc
Confidence 3578999999 7999999999999999999977665543 33 3444543 2222 11111 126777655433323
Q ss_pred HHHHHhhcc
Q 017901 251 ERLGLNFLK 259 (364)
Q Consensus 251 ~~~~~~~l~ 259 (364)
....++.++
T Consensus 99 ~~~~~~~l~ 107 (200)
T cd01075 99 NDDTIPQLK 107 (200)
T ss_pred CHHHHHHcC
Confidence 334444443
No 424
>PRK06436 glycerate dehydrogenase; Provisional
Probab=94.30 E-value=0.29 Score=44.41 Aligned_cols=85 Identities=20% Similarity=0.198 Sum_probs=59.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH--
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE-- 251 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~-- 251 (364)
.|+++.|.| .|.+|...++.++.+|.+|++..++... .+..... .++.+.+.. .|+|+.++...+..
T Consensus 121 ~gktvgIiG-~G~IG~~vA~~l~afG~~V~~~~r~~~~-----~~~~~~~----~~l~ell~~-aDiv~~~lp~t~~T~~ 189 (303)
T PRK06436 121 YNKSLGILG-YGGIGRRVALLAKAFGMNIYAYTRSYVN-----DGISSIY----MEPEDIMKK-SDFVLISLPLTDETRG 189 (303)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcc-----cCccccc----CCHHHHHhh-CCEEEECCCCCchhhc
Confidence 579999999 9999999999999999999998765321 1221111 133333334 89999988864222
Q ss_pred ---HHHHhhccCCCEEEEEcc
Q 017901 252 ---RLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 252 ---~~~~~~l~~~G~~v~~g~ 269 (364)
...++.|+++..+|.++-
T Consensus 190 li~~~~l~~mk~ga~lIN~sR 210 (303)
T PRK06436 190 MINSKMLSLFRKGLAIINVAR 210 (303)
T ss_pred CcCHHHHhcCCCCeEEEECCC
Confidence 356788899888887763
No 425
>PRK14982 acyl-ACP reductase; Provisional
Probab=94.30 E-value=0.25 Score=45.38 Aligned_cols=92 Identities=16% Similarity=0.163 Sum_probs=61.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHH-cCC-eEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCc
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVA-SGC-HVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP 248 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~-~g~-~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~ 248 (364)
-.+.+|+|+||+|.+|..+++.+.. .|. +++.+.++.++ .+..+++...+ .++.+.+.+ +|+|+-+++.+
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i-----~~l~~~l~~-aDiVv~~ts~~ 226 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI-----LSLEEALPE-ADIVVWVASMP 226 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH-----HhHHHHHcc-CCEEEECCcCC
Confidence 4678999999999999999988864 464 77777776543 33444432222 134445556 99999999985
Q ss_pred hhHHHHHhhccCCCEEEEEccC
Q 017901 249 ETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 249 ~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
..+..-...++++-.++..+.+
T Consensus 227 ~~~~I~~~~l~~~~~viDiAvP 248 (340)
T PRK14982 227 KGVEIDPETLKKPCLMIDGGYP 248 (340)
T ss_pred cCCcCCHHHhCCCeEEEEecCC
Confidence 3322222456777788888766
No 426
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.29 E-value=0.18 Score=44.58 Aligned_cols=97 Identities=20% Similarity=0.234 Sum_probs=60.6
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEeeCCcc----HHHH---HHcCC-cee--eeCCChh----HHHHhc--
Q 017901 174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATCGSKS----IDRV---LAAGA-EQA--VDYSSKD----IELAIK-- 235 (364)
Q Consensus 174 ~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~~~~~----~~~~---~~~g~-~~v--~~~~~~~----~~~~i~-- 235 (364)
.|++++|+|++ +++|.++++.+...|++|+.+.++.+ .+.+ .+.+. ... .|..+.+ +.+.+.
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 46889999975 79999999999999999987754321 1222 22221 112 2333322 222222
Q ss_pred -CCccEEEECCCCc-------hh----------------------HHHHHhhccCCCEEEEEccC
Q 017901 236 -GKFDAVLDTIGAP-------ET----------------------ERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 236 -g~~D~vid~~g~~-------~~----------------------~~~~~~~l~~~G~~v~~g~~ 270 (364)
|++|+++.+.|.. .. .+.++..++++|+++.++..
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~ 149 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYL 149 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecc
Confidence 5699999998842 01 24566677778999888754
No 427
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.28 E-value=0.26 Score=44.11 Aligned_cols=78 Identities=19% Similarity=0.316 Sum_probs=54.5
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HHHHHcCCcee-----------eeCCC-hhHHHHhc-
Q 017901 171 RMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DRVLAAGAEQA-----------VDYSS-KDIELAIK- 235 (364)
Q Consensus 171 ~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~~~~~g~~~v-----------~~~~~-~~~~~~i~- 235 (364)
..++...++|.|++.++|++.+..++..|+.|..+.++.++ +..++++.... .+|+. ....++++
T Consensus 29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~ 108 (331)
T KOG1210|consen 29 KPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRD 108 (331)
T ss_pred ccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhh
Confidence 33455789999999999999999999999999999999875 33444443211 11111 12233333
Q ss_pred --CCccEEEECCCCc
Q 017901 236 --GKFDAVLDTIGAP 248 (364)
Q Consensus 236 --g~~D~vid~~g~~ 248 (364)
+.+|.+|.|.|..
T Consensus 109 ~~~~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 109 LEGPIDNLFCCAGVA 123 (331)
T ss_pred ccCCcceEEEecCcc
Confidence 5689999999974
No 428
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=94.28 E-value=0.51 Score=43.94 Aligned_cols=93 Identities=15% Similarity=0.201 Sum_probs=65.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHc--CCeEEEeeCCcc--H--HHHHHcCCceeeeCCCh---hHH---------------
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVAS--GCHVSATCGSKS--I--DRVLAAGAEQAVDYSSK---DIE--------------- 231 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~--g~~vi~~~~~~~--~--~~~~~~g~~~v~~~~~~---~~~--------------- 231 (364)
++|.|.|++|.+|..+..+.+.. .++|++++-+.. + +.+++++...+.-.+.. .+.
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~~ 81 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGEE 81 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEEChh
Confidence 47899999999999999998776 568888863322 2 56788887765433321 111
Q ss_pred ---HHhc-CCccEEEECCCCchhHHHHHhhccCCCEEEEEc
Q 017901 232 ---LAIK-GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 232 ---~~i~-g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g 268 (364)
+.+. ..+|+|+.++++...+.-.+.+++.|-++.+..
T Consensus 82 ~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLAN 122 (385)
T PRK05447 82 GLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALAN 122 (385)
T ss_pred HHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEeC
Confidence 1111 138999999998767888889998887776643
No 429
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=94.26 E-value=0.14 Score=39.98 Aligned_cols=79 Identities=20% Similarity=0.211 Sum_probs=47.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC-CccH-HH-HHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG-SKSI-DR-VLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE 251 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~-~~~~-~~-~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~ 251 (364)
.-+|-|.| +|.+|..+...++..|..|..+.+ +.+. +. ...++...+.+. .+.+.. +|++|-++.+. .+
T Consensus 10 ~l~I~iIG-aGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~-----~~~~~~-aDlv~iavpDd-aI 81 (127)
T PF10727_consen 10 RLKIGIIG-AGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDL-----EEILRD-ADLVFIAVPDD-AI 81 (127)
T ss_dssp --EEEEEC-TSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----T-----TGGGCC--SEEEE-S-CC-HH
T ss_pred ccEEEEEC-CCHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccc-----cccccc-CCEEEEEechH-HH
Confidence 35789999 799999999999999999999854 4332 33 333444333332 222334 99999999998 77
Q ss_pred HHHHhhccCC
Q 017901 252 RLGLNFLKRG 261 (364)
Q Consensus 252 ~~~~~~l~~~ 261 (364)
....+.|+..
T Consensus 82 ~~va~~La~~ 91 (127)
T PF10727_consen 82 AEVAEQLAQY 91 (127)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHHHHHh
Confidence 7666666543
No 430
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=94.26 E-value=0.17 Score=47.79 Aligned_cols=89 Identities=25% Similarity=0.360 Sum_probs=57.7
Q ss_pred EEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-H-HHHH-cCC--c-eeeeCCCh-hHHHHhcCCccEEEECCCCc
Q 017901 178 LLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-D-RVLA-AGA--E-QAVDYSSK-DIELAIKGKFDAVLDTIGAP 248 (364)
Q Consensus 178 vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-~-~~~~-~g~--~-~v~~~~~~-~~~~~i~g~~D~vid~~g~~ 248 (364)
|+|.|+ |.+|..+++.+...+. +|++..++.++ + .+.+ .+. . ..+|.++. ++.+.+++ .|+|++|+|..
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~-~dvVin~~gp~ 78 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRG-CDVVINCAGPF 78 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTT-SSEEEE-SSGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhc-CCEEEECCccc
Confidence 689997 9999999999988764 78888887765 3 3333 222 1 23444443 45555556 99999999987
Q ss_pred hhHHHHHhhccCCCEEEEEc
Q 017901 249 ETERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 249 ~~~~~~~~~l~~~G~~v~~g 268 (364)
.....+-.|++.|-.++...
T Consensus 79 ~~~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 79 FGEPVARACIEAGVHYVDTS 98 (386)
T ss_dssp GHHHHHHHHHHHT-EEEESS
T ss_pred hhHHHHHHHHHhCCCeeccc
Confidence 55666677778888888854
No 431
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.25 E-value=0.27 Score=46.49 Aligned_cols=101 Identities=22% Similarity=0.267 Sum_probs=63.1
Q ss_pred cccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--------HHHHHc-CCcee-eeCCCh-hHHHHhcC--
Q 017901 170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--------DRVLAA-GAEQA-VDYSSK-DIELAIKG-- 236 (364)
Q Consensus 170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--------~~~~~~-g~~~v-~~~~~~-~~~~~i~g-- 236 (364)
.+-..+.+|+|.||+|.+|..+++.+...|.+|+++.++... +..... ++..+ .|..+. ++...+.+
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~ 134 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG 134 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC
Confidence 344567899999999999999999999899999999886532 111111 23222 244443 33333432
Q ss_pred -CccEEEECCCCch------------hHHHHHhhccCC--CEEEEEccC
Q 017901 237 -KFDAVLDTIGAPE------------TERLGLNFLKRG--GHYMTLHGE 270 (364)
Q Consensus 237 -~~D~vid~~g~~~------------~~~~~~~~l~~~--G~~v~~g~~ 270 (364)
++|+||.|.+... ....+++.++.. +++|.++..
T Consensus 135 ~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 135 DPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred CCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 4999999987421 122344444433 478877643
No 432
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.23 E-value=0.25 Score=43.96 Aligned_cols=71 Identities=17% Similarity=0.277 Sum_probs=46.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-H---HHHcCCce-ee--eCCCh-h---HHHHhc---CCccEE
Q 017901 177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-R---VLAAGAEQ-AV--DYSSK-D---IELAIK---GKFDAV 241 (364)
Q Consensus 177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~---~~~~g~~~-v~--~~~~~-~---~~~~i~---g~~D~v 241 (364)
+++|+|++|.+|..+++.+...|++|+.+.++.+. + . +...+.+. .+ |..+. + +.+.+. +++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 68999999999999999998899999998876543 2 2 22333221 12 33332 1 222221 459999
Q ss_pred EECCCC
Q 017901 242 LDTIGA 247 (364)
Q Consensus 242 id~~g~ 247 (364)
|.+.|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999885
No 433
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=94.23 E-value=0.48 Score=38.11 Aligned_cols=90 Identities=30% Similarity=0.313 Sum_probs=59.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhH-------HHHhc-----CCccEEEE
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDI-------ELAIK-----GKFDAVLD 243 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~-------~~~i~-----g~~D~vid 243 (364)
.+|+|+|+-|.+|.++++..|..++-|..+.-.+..+ .....+++.+ .++ .+++. .++|.||.
T Consensus 4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~----Ad~sI~V~~~-~swtEQe~~v~~~vg~sL~gekvDav~C 78 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQ----ADSSILVDGN-KSWTEQEQSVLEQVGSSLQGEKVDAVFC 78 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccc----ccceEEecCC-cchhHHHHHHHHHHHHhhcccccceEEE
Confidence 4799999999999999999999999888875443321 1122233322 222 22222 35999998
Q ss_pred CCCCch--------h------------------HHHHHhhccCCCEEEEEccC
Q 017901 244 TIGAPE--------T------------------ERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 244 ~~g~~~--------~------------------~~~~~~~l~~~G~~v~~g~~ 270 (364)
..|+-. . ...+...|++||.+-+.|..
T Consensus 79 VAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAk 131 (236)
T KOG4022|consen 79 VAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAK 131 (236)
T ss_pred eeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccc
Confidence 777531 0 24556689999999888753
No 434
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=94.23 E-value=0.23 Score=45.50 Aligned_cols=92 Identities=21% Similarity=0.237 Sum_probs=58.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHcC----CeEEEeeCCccH---HHHHHcCCc--------------eeeeCCC-----hhH
Q 017901 177 RLLVLGGGGAVGFAAVQFSVASG----CHVSATCGSKSI---DRVLAAGAE--------------QAVDYSS-----KDI 230 (364)
Q Consensus 177 ~vli~g~~g~~G~~~~~~a~~~g----~~vi~~~~~~~~---~~~~~~g~~--------------~v~~~~~-----~~~ 230 (364)
+|.|+| .|.+|..+.+++...+ ..|.++..-... ..+.+.+.. -.++.+. +.-
T Consensus 1 ~IaInG-fGrIGR~vlr~l~e~~~~~~~~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAING-FGRIGRNVLRALYESGERLGIEVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEEC-CCHHHHHHHHHHHhcCCCCCeEEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 478999 5999999999987653 678887442222 233332210 0111100 000
Q ss_pred HHHhc----CCccEEEECCCCchhHHHHHhhccCCCEEEEEccC
Q 017901 231 ELAIK----GKFDAVLDTIGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 231 ~~~i~----g~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.+.+. | +|+||+|+|.......+...++.|++.|.++.+
T Consensus 80 p~~~~w~~~g-vDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP 122 (325)
T TIGR01532 80 PEALPWRALG-VDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP 122 (325)
T ss_pred hhhccccccC-CCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence 11111 5 999999999987778888999999899988865
No 435
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=94.20 E-value=0.28 Score=44.74 Aligned_cols=85 Identities=20% Similarity=0.212 Sum_probs=57.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET--- 250 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~--- 250 (364)
.|+++.|.| .|.+|..++++++.+|.+|++..+..... ..+.. ..++.+.+.. .|+|+-++...+.
T Consensus 144 ~gktvGIiG-~G~IG~~vA~~~~~fgm~V~~~d~~~~~~---~~~~~------~~~l~ell~~-sDvv~lh~Plt~~T~~ 212 (311)
T PRK08410 144 KGKKWGIIG-LGTIGKRVAKIAQAFGAKVVYYSTSGKNK---NEEYE------RVSLEELLKT-SDIISIHAPLNEKTKN 212 (311)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhcCCEEEEECCCcccc---ccCce------eecHHHHhhc-CCEEEEeCCCCchhhc
Confidence 578999999 99999999999999999999987643211 11111 1133444434 7887777664311
Q ss_pred --HHHHHhhccCCCEEEEEcc
Q 017901 251 --ERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 251 --~~~~~~~l~~~G~~v~~g~ 269 (364)
-...+..|+++..+|.++-
T Consensus 213 li~~~~~~~Mk~~a~lIN~aR 233 (311)
T PRK08410 213 LIAYKELKLLKDGAILINVGR 233 (311)
T ss_pred ccCHHHHHhCCCCeEEEECCC
Confidence 1466778888888887763
No 436
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=94.17 E-value=0.52 Score=40.41 Aligned_cols=95 Identities=18% Similarity=0.170 Sum_probs=58.7
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH-HHHcCCcee--------------eeCCChhH---HH
Q 017901 172 MSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAEQA--------------VDYSSKDI---EL 232 (364)
Q Consensus 172 ~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~-~~~~g~~~v--------------~~~~~~~~---~~ 232 (364)
+.++.+||+.| .+.|.-++-+|. .|.+|+++.-++.. +. +.+.+.... ++....|+ ..
T Consensus 32 ~~~~~rvLd~G--CG~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 32 LPAGARVFVPL--CGKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCCeEEEeC--CCchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 35778999998 346888888875 69999999776653 43 333332210 00000111 11
Q ss_pred HhcCCccEEEECCCC--------chhHHHHHhhccCCCEEEEEcc
Q 017901 233 AIKGKFDAVLDTIGA--------PETERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 233 ~i~g~~D~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g~ 269 (364)
...+++|.|+|+..- ...+..+.++|+|||+++..+.
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 111348999997531 2257799999999998776654
No 437
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=94.16 E-value=0.21 Score=43.69 Aligned_cols=102 Identities=21% Similarity=0.226 Sum_probs=65.2
Q ss_pred HHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCC--eEEEeeCCccH-----HHHHHcCCceeeeCCC-----hhHHHHh
Q 017901 167 KCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGC--HVSATCGSKSI-----DRVLAAGAEQAVDYSS-----KDIELAI 234 (364)
Q Consensus 167 ~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~--~vi~~~~~~~~-----~~~~~~g~~~v~~~~~-----~~~~~~i 234 (364)
....++.||++|+=.| .+.|.++..+++..|. +|+....+++. +.++..|....+.... ..+...+
T Consensus 33 ~~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~~~ 110 (247)
T PF08704_consen 33 LMRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDEEL 110 (247)
T ss_dssp HHHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--STT-
T ss_pred HHHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccccccc
Confidence 3568999999999988 3358888889988774 89988665543 3456677653222211 1221122
Q ss_pred cCCccEEEECCCCc-hhHHHHHhhc-cCCCEEEEEccC
Q 017901 235 KGKFDAVLDTIGAP-ETERLGLNFL-KRGGHYMTLHGE 270 (364)
Q Consensus 235 ~g~~D~vid~~g~~-~~~~~~~~~l-~~~G~~v~~g~~ 270 (364)
.+.+|.||-=...+ ..+..+.+.| ++||+++++.-.
T Consensus 111 ~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP~ 148 (247)
T PF08704_consen 111 ESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSPC 148 (247)
T ss_dssp TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEESS
T ss_pred cCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCC
Confidence 22389877666665 5899999999 899999999643
No 438
>PRK06487 glycerate dehydrogenase; Provisional
Probab=94.12 E-value=0.27 Score=45.02 Aligned_cols=82 Identities=21% Similarity=0.201 Sum_probs=56.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET--- 250 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~--- 250 (364)
.|+++.|.| .|.+|..+++.++.+|.+|++..+..... ... ..++.+.+.. .|+|+.+..-...
T Consensus 147 ~gktvgIiG-~G~IG~~vA~~l~~fgm~V~~~~~~~~~~-----~~~------~~~l~ell~~-sDiv~l~lPlt~~T~~ 213 (317)
T PRK06487 147 EGKTLGLLG-HGELGGAVARLAEAFGMRVLIGQLPGRPA-----RPD------RLPLDELLPQ-VDALTLHCPLTEHTRH 213 (317)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhhCCCEEEEECCCCCcc-----ccc------ccCHHHHHHh-CCEEEECCCCChHHhc
Confidence 578999999 99999999999999999999886542211 111 1133333433 7888877764321
Q ss_pred --HHHHHhhccCCCEEEEEc
Q 017901 251 --ERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 251 --~~~~~~~l~~~G~~v~~g 268 (364)
-...+..|+++..+|.++
T Consensus 214 li~~~~~~~mk~ga~lIN~a 233 (317)
T PRK06487 214 LIGARELALMKPGALLINTA 233 (317)
T ss_pred CcCHHHHhcCCCCeEEEECC
Confidence 146677888888888776
No 439
>PLN02214 cinnamoyl-CoA reductase
Probab=94.11 E-value=0.2 Score=46.37 Aligned_cols=96 Identities=19% Similarity=0.243 Sum_probs=60.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HHHHHcC--Cc--eee--eCCCh-hHHHHhcCCccEEE
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DRVLAAG--AE--QAV--DYSSK-DIELAIKGKFDAVL 242 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~~~~~g--~~--~v~--~~~~~-~~~~~i~g~~D~vi 242 (364)
..+.+|+|+||+|.+|..+++.+...|.+|+++.++.+. ..+..+. .. ..+ |..+. ++.+.+.+ +|+||
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~d~Vi 86 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDG-CDGVF 86 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhc-CCEEE
Confidence 356789999999999999999999999999999876442 1122221 11 122 33332 34445556 99999
Q ss_pred ECCCCch------------hHHHHHhhccCCC--EEEEEcc
Q 017901 243 DTIGAPE------------TERLGLNFLKRGG--HYMTLHG 269 (364)
Q Consensus 243 d~~g~~~------------~~~~~~~~l~~~G--~~v~~g~ 269 (364)
.+.+... .....+++++..| ++|.++.
T Consensus 87 h~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS 127 (342)
T PLN02214 87 HTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSS 127 (342)
T ss_pred EecCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecc
Confidence 9987420 1233444444433 7887664
No 440
>PRK06932 glycerate dehydrogenase; Provisional
Probab=94.09 E-value=0.39 Score=43.86 Aligned_cols=84 Identities=20% Similarity=0.156 Sum_probs=58.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH--
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE-- 251 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~-- 251 (364)
.|+++.|.| .|.+|...+++++.+|++|++..+..... ... .-.++.+.+.. .|+|+-++.-....
T Consensus 146 ~gktvgIiG-~G~IG~~va~~l~~fg~~V~~~~~~~~~~----~~~------~~~~l~ell~~-sDiv~l~~Plt~~T~~ 213 (314)
T PRK06932 146 RGSTLGVFG-KGCLGTEVGRLAQALGMKVLYAEHKGASV----CRE------GYTPFEEVLKQ-ADIVTLHCPLTETTQN 213 (314)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCcccc----ccc------ccCCHHHHHHh-CCEEEEcCCCChHHhc
Confidence 478999999 99999999999999999999875432111 010 01134444444 89988887743221
Q ss_pred ---HHHHhhccCCCEEEEEcc
Q 017901 252 ---RLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 252 ---~~~~~~l~~~G~~v~~g~ 269 (364)
...+..|+++..+|.++-
T Consensus 214 li~~~~l~~mk~ga~lIN~aR 234 (314)
T PRK06932 214 LINAETLALMKPTAFLINTGR 234 (314)
T ss_pred ccCHHHHHhCCCCeEEEECCC
Confidence 477788899988888873
No 441
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=94.07 E-value=0.35 Score=44.82 Aligned_cols=93 Identities=15% Similarity=0.187 Sum_probs=58.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHH-HHcC-Cce--eeeCCChhHHHHhcCCccEEEECCCCch
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRV-LAAG-AEQ--AVDYSSKDIELAIKGKFDAVLDTIGAPE 249 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~-~~~g-~~~--v~~~~~~~~~~~i~g~~D~vid~~g~~~ 249 (364)
.+|+|.|++|.+|...++++..+ +.++++++++... +.+ ...+ ... ...+++.+.. ...+ +|+||-|++...
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~-~~~~-vD~Vf~alP~~~ 80 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE-ILAG-ADVVFLALPHGV 80 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH-HhcC-CCEEEECCCcHH
Confidence 37899999999999888888766 6788888764332 222 2211 110 0111111111 2235 999999999985
Q ss_pred hHHHHHhhccCCCEEEEEccC
Q 017901 250 TERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 250 ~~~~~~~~l~~~G~~v~~g~~ 270 (364)
..+.+..+++.|-.+|..+..
T Consensus 81 ~~~~v~~a~~aG~~VID~S~~ 101 (343)
T PRK00436 81 SMDLAPQLLEAGVKVIDLSAD 101 (343)
T ss_pred HHHHHHHHHhCCCEEEECCcc
Confidence 566666666666678888754
No 442
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=94.03 E-value=0.51 Score=40.65 Aligned_cols=96 Identities=17% Similarity=0.116 Sum_probs=57.6
Q ss_pred cccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH-HHHcCCcee--------------eeCCChhHHH-
Q 017901 170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR-VLAAGAEQA--------------VDYSSKDIEL- 232 (364)
Q Consensus 170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~-~~~~g~~~v--------------~~~~~~~~~~- 232 (364)
..+.++.+||+.| ++.|.-+.-+|. .|++|+++.-++.. +. .++.+.... ++....++.+
T Consensus 33 ~~~~~~~rvL~~g--CG~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l 109 (218)
T PRK13255 33 LALPAGSRVLVPL--CGKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFAL 109 (218)
T ss_pred hCCCCCCeEEEeC--CCChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCC
Confidence 3456778999998 346888888876 69999999766553 33 334432210 0000011111
Q ss_pred --HhcCCccEEEECCCC--------chhHHHHHhhccCCCEEEEEc
Q 017901 233 --AIKGKFDAVLDTIGA--------PETERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 233 --~i~g~~D~vid~~g~--------~~~~~~~~~~l~~~G~~v~~g 268 (364)
...+.+|.|+|..-- ...+..+.++|+|||+++.+.
T Consensus 110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~~ 155 (218)
T PRK13255 110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLVT 155 (218)
T ss_pred CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 111348999996531 125788999999999755543
No 443
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.01 E-value=0.22 Score=43.58 Aligned_cols=73 Identities=25% Similarity=0.371 Sum_probs=47.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHH----HHcCCce---eeeCCChh-HH---HHhc---CCcc
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRV----LAAGAEQ---AVDYSSKD-IE---LAIK---GKFD 239 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~----~~~g~~~---v~~~~~~~-~~---~~i~---g~~D 239 (364)
++++||+|++|.+|..++..+...|++|+++.++.+. +.+ ...+... ..|..+.+ +. +.+. +++|
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 3579999999999999999998999999999887553 222 2223221 12444332 21 1221 3489
Q ss_pred EEEECCCC
Q 017901 240 AVLDTIGA 247 (364)
Q Consensus 240 ~vid~~g~ 247 (364)
++|.+.|.
T Consensus 81 ~vi~~a~~ 88 (255)
T TIGR01963 81 ILVNNAGI 88 (255)
T ss_pred EEEECCCC
Confidence 99998874
No 444
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=94.00 E-value=0.61 Score=39.97 Aligned_cols=99 Identities=24% Similarity=0.353 Sum_probs=67.5
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH-----HHHHHcCCcee---eeC-CChhHHHH-hc
Q 017901 168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI-----DRVLAAGAEQA---VDY-SSKDIELA-IK 235 (364)
Q Consensus 168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~-----~~~~~~g~~~v---~~~-~~~~~~~~-i~ 235 (364)
..+.....+++|=.| ..+|+.++.+|..+. .+++.+..++++ +.+++.|.+.. +.. +.-+..+. ..
T Consensus 53 ~L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~~~~ 130 (219)
T COG4122 53 LLARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSRLLD 130 (219)
T ss_pred HHHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHhccC
Confidence 445667888999998 568999999998876 478888777653 34577787652 221 22233332 22
Q ss_pred CCccEEEE-CCCC--chhHHHHHhhccCCCEEEEEc
Q 017901 236 GKFDAVLD-TIGA--PETERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 236 g~~D~vid-~~g~--~~~~~~~~~~l~~~G~~v~~g 268 (364)
+.+|+||- +--. +..++.++++|++||.+|.=.
T Consensus 131 ~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN 166 (219)
T COG4122 131 GSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN 166 (219)
T ss_pred CCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence 56999764 4333 357899999999999988653
No 445
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=93.99 E-value=1.1 Score=40.21 Aligned_cols=93 Identities=17% Similarity=0.148 Sum_probs=63.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhc--CCccEEEECCCCchhH
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIK--GKFDAVLDTIGAPETE 251 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~--g~~D~vid~~g~~~~~ 251 (364)
...+|+..| +|-+|.-.+--++.+|..|+++.+=...-..+-....+|+|..+.+....+- .+.|+++--+-.- ..
T Consensus 11 ~a~kvmLLG-SGELGKEvaIe~QRLG~eViAVDrY~~APAmqVAhrs~Vi~MlD~~al~avv~rekPd~IVpEiEAI-~t 88 (394)
T COG0027 11 QATKVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAHRSYVIDMLDGDALRAVVEREKPDYIVPEIEAI-AT 88 (394)
T ss_pred CCeEEEEec-CCccchHHHHHHHhcCCEEEEecCcCCChhhhhhhheeeeeccCHHHHHHHHHhhCCCeeeehhhhh-hH
Confidence 346788888 8999999999999999999999875543222222344688887765444332 3489887544443 44
Q ss_pred HHHHhhccCCCEEEEEc
Q 017901 252 RLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 252 ~~~~~~l~~~G~~v~~g 268 (364)
+...++=..|.++|-..
T Consensus 89 d~L~elE~~G~~VVP~A 105 (394)
T COG0027 89 DALVELEEEGYTVVPNA 105 (394)
T ss_pred HHHHHHHhCCceEccch
Confidence 56666667777777554
No 446
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=93.99 E-value=0.36 Score=42.09 Aligned_cols=74 Identities=27% Similarity=0.358 Sum_probs=47.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC-cc-H-HH---HHHcCCce-ee--eCCCh-hHH---HHhc---CC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KS-I-DR---VLAAGAEQ-AV--DYSSK-DIE---LAIK---GK 237 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~-~~-~-~~---~~~~g~~~-v~--~~~~~-~~~---~~i~---g~ 237 (364)
.+++++|+|++|.+|..+++.+...|++|+++.+. ++ . +. +...+... .+ |..+. ++. +.+. ++
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 36899999999999999999888899999876443 22 1 22 22333321 22 33332 222 2221 45
Q ss_pred ccEEEECCCC
Q 017901 238 FDAVLDTIGA 247 (364)
Q Consensus 238 ~D~vid~~g~ 247 (364)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (247)
T PRK12935 85 VDILVNNAGI 94 (247)
T ss_pred CCEEEECCCC
Confidence 8999999886
No 447
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=93.98 E-value=0.29 Score=47.47 Aligned_cols=73 Identities=22% Similarity=0.363 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc----------------------cHHHHHHcCCceeeeCCCh---
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK----------------------SIDRVLAAGAEQAVDYSSK--- 228 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~----------------------~~~~~~~~g~~~v~~~~~~--- 228 (364)
.+++|+|.| +|+.|+.++..++..|.+|+.+...+ ..+.++++|++..++..-.
T Consensus 140 ~~~~V~IIG-~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 218 (467)
T TIGR01318 140 TGKRVAVIG-AGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDI 218 (467)
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCcc
Confidence 578999999 89999999999999999988775432 1245678888755543211
Q ss_pred hHHHHhcCCccEEEECCCCc
Q 017901 229 DIELAIKGKFDAVLDTIGAP 248 (364)
Q Consensus 229 ~~~~~i~g~~D~vid~~g~~ 248 (364)
.+.+...+ +|.||.++|..
T Consensus 219 ~~~~~~~~-~D~vilAtGa~ 237 (467)
T TIGR01318 219 SLDDLLED-YDAVFLGVGTY 237 (467)
T ss_pred CHHHHHhc-CCEEEEEeCCC
Confidence 11121124 99999999985
No 448
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=93.95 E-value=0.23 Score=46.54 Aligned_cols=73 Identities=23% Similarity=0.165 Sum_probs=48.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHH-HHHcCCce-eeeCCCh-hHHHHhcCCccEEEECCC
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-VLAAGAEQ-AVDYSSK-DIELAIKGKFDAVLDTIG 246 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~-~~~~g~~~-v~~~~~~-~~~~~i~g~~D~vid~~g 246 (364)
..+++|+|+|++|.+|..++..+...|.+|+++.+...... ...++... ..|..+. .+...+.+ +|+||.+.+
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~D~Vih~Aa 94 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKG-VDHVFNLAA 94 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhC-CCEEEEccc
Confidence 35689999999999999999999999999999986533111 01111111 1233332 23333345 999999985
No 449
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=93.93 E-value=0.44 Score=43.01 Aligned_cols=94 Identities=12% Similarity=0.152 Sum_probs=54.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCc----cH-HHHHHcC---Cc---eeeeCCCh-hHHHHhcCCcc
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSK----SI-DRVLAAG---AE---QAVDYSSK-DIELAIKGKFD 239 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~----~~-~~~~~~g---~~---~v~~~~~~-~~~~~i~g~~D 239 (364)
..+++++|.|+ |++|.+++..+...|++ |+.+.++. +. +.+.++. .. ...+..+. ++...+.. +|
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~-~D 201 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIAS-SD 201 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhcc-CC
Confidence 35788999995 89999999888889996 87777764 22 3333332 11 11233222 23333334 89
Q ss_pred EEEECCCCc-----hhHHH-HHhhccCCCEEEEEc
Q 017901 240 AVLDTIGAP-----ETERL-GLNFLKRGGHYMTLH 268 (364)
Q Consensus 240 ~vid~~g~~-----~~~~~-~~~~l~~~G~~v~~g 268 (364)
++|+|+.-. +.... ....+.++..++.+-
T Consensus 202 ilINaTp~Gm~~~~~~~~~~~~~~l~~~~~v~D~v 236 (289)
T PRK12548 202 ILVNATLVGMKPNDGETNIKDTSVFRKDLVVADTV 236 (289)
T ss_pred EEEEeCCCCCCCCCCCCCCCcHHhcCCCCEEEEec
Confidence 999988532 01111 124566666666554
No 450
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=93.92 E-value=0.32 Score=44.57 Aligned_cols=73 Identities=26% Similarity=0.346 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH---H-cCC---ceee--eCCCh-hHHHHhcCCccEEE
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL---A-AGA---EQAV--DYSSK-DIELAIKGKFDAVL 242 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~---~-~g~---~~v~--~~~~~-~~~~~i~g~~D~vi 242 (364)
.++++||+||+|.+|..+++.+...|++|+++.++... .... . .+. .+.+ |..+. ++.+.+.+ +|+||
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~-~d~vi 82 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDG-CETVF 82 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcC-CCEEE
Confidence 47899999999999999999999999999887665432 1111 1 111 1122 33333 34444445 99999
Q ss_pred ECCCC
Q 017901 243 DTIGA 247 (364)
Q Consensus 243 d~~g~ 247 (364)
.+.|.
T Consensus 83 h~A~~ 87 (325)
T PLN02989 83 HTASP 87 (325)
T ss_pred EeCCC
Confidence 99873
No 451
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=93.91 E-value=0.33 Score=42.54 Aligned_cols=72 Identities=25% Similarity=0.376 Sum_probs=47.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCce-e--eeCCChh-HHH---Hhc---CCccE
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAEQ-A--VDYSSKD-IEL---AIK---GKFDA 240 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~~-v--~~~~~~~-~~~---~i~---g~~D~ 240 (364)
++++|.|++|.+|...++.+...|++|+.+.++++. +. +...+... . .|..+.+ +.+ .+. +++|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 368999999999999999999999999998876542 22 23334221 1 2333332 222 221 45899
Q ss_pred EEECCCC
Q 017901 241 VLDTIGA 247 (364)
Q Consensus 241 vid~~g~ 247 (364)
+|.+.|.
T Consensus 81 vi~~ag~ 87 (254)
T TIGR02415 81 MVNNAGV 87 (254)
T ss_pred EEECCCc
Confidence 9999875
No 452
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=93.90 E-value=0.53 Score=40.50 Aligned_cols=37 Identities=27% Similarity=0.335 Sum_probs=32.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS 210 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~ 210 (364)
-.|.+|+|.| .|.+|+.+++.+...|+++++++..+.
T Consensus 21 l~g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vsD~~g 57 (217)
T cd05211 21 LEGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVSDPDG 57 (217)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence 3688999999 999999999999999999888865443
No 453
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=93.89 E-value=0.52 Score=42.34 Aligned_cols=73 Identities=21% Similarity=0.209 Sum_probs=44.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH--HHHHHcC----CceeeeCCChhHHHHhcCCccEEEECC
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAG----AEQAVDYSSKDIELAIKGKFDAVLDTI 245 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~--~~~~~~g----~~~v~~~~~~~~~~~i~g~~D~vid~~ 245 (364)
..+++++|.| +|+.+.+++..+...|+ +++.+.|+.++ +++.++. ...+......++...+.. +|+|++|+
T Consensus 125 ~~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~-~divINaT 202 (283)
T PRK14027 125 AKLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAA-ADGVVNAT 202 (283)
T ss_pred cCCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhh-cCEEEEcC
Confidence 3478899999 79999999988888998 56666666544 3333332 111111111112222334 89999997
Q ss_pred CC
Q 017901 246 GA 247 (364)
Q Consensus 246 g~ 247 (364)
.-
T Consensus 203 p~ 204 (283)
T PRK14027 203 PM 204 (283)
T ss_pred CC
Confidence 64
No 454
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=93.89 E-value=0.3 Score=45.11 Aligned_cols=89 Identities=17% Similarity=0.256 Sum_probs=55.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCC---eEEEeeCCccH-HHHHHcCCceeee-CCChhHHHHhcCCccEEEECCCCchh
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASGC---HVSATCGSKSI-DRVLAAGAEQAVD-YSSKDIELAIKGKFDAVLDTIGAPET 250 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g~---~vi~~~~~~~~-~~~~~~g~~~v~~-~~~~~~~~~i~g~~D~vid~~g~~~~ 250 (364)
.+|+|.||+|.+|..+++++...+. ++.++++.... +.+.-.+.+..+. ... ..+.+ +|+||.|+|...+
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~----~~~~~-vDvVf~A~g~g~s 76 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTT----FDFSG-VDIALFSAGGSVS 76 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCH----HHHcC-CCEEEECCChHHH
Confidence 4799999999999999999988654 55666554332 2221112222222 111 12235 9999999999844
Q ss_pred HHHHHhhccCCCEEEEEcc
Q 017901 251 ERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 251 ~~~~~~~l~~~G~~v~~g~ 269 (364)
...+-+.+..|..+|..+.
T Consensus 77 ~~~~~~~~~~G~~VIDlS~ 95 (334)
T PRK14874 77 KKYAPKAAAAGAVVIDNSS 95 (334)
T ss_pred HHHHHHHHhCCCEEEECCc
Confidence 4455555566666775553
No 455
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=93.89 E-value=0.76 Score=41.26 Aligned_cols=56 Identities=21% Similarity=0.231 Sum_probs=42.6
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC---Cc-cHHHHHHcCCceeee
Q 017901 168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG---SK-SIDRVLAAGAEQAVD 224 (364)
Q Consensus 168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~---~~-~~~~~~~~g~~~v~~ 224 (364)
..+.+++|+ .+|-+.+|..|++.+.+|+.+|++++.+.. +. ++..++.+|+.-++.
T Consensus 55 ~~G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t 114 (300)
T COG0031 55 KRGLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILT 114 (300)
T ss_pred HcCCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEc
Confidence 557799998 566677999999999999999998887732 22 336778888875543
No 456
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=93.88 E-value=0.4 Score=44.05 Aligned_cols=73 Identities=18% Similarity=0.206 Sum_probs=47.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcC--CeEEEeeCCccH--HHHHHcCCc--ee--eeCCCh-hHHHHhcCCccEEEEC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASG--CHVSATCGSKSI--DRVLAAGAE--QA--VDYSSK-DIELAIKGKFDAVLDT 244 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g--~~vi~~~~~~~~--~~~~~~g~~--~v--~~~~~~-~~~~~i~g~~D~vid~ 244 (364)
.|.++||+||+|.+|..+++.+...| .+|+++.++... .....+... .+ .|..+. .+.+.+.+ +|+||.+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~-iD~Vih~ 81 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRG-VDYVVHA 81 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhc-CCEEEEC
Confidence 36789999999999999998887775 688888765443 222222211 12 243443 33344445 9999998
Q ss_pred CCC
Q 017901 245 IGA 247 (364)
Q Consensus 245 ~g~ 247 (364)
.|.
T Consensus 82 Ag~ 84 (324)
T TIGR03589 82 AAL 84 (324)
T ss_pred ccc
Confidence 874
No 457
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=93.86 E-value=0.31 Score=43.53 Aligned_cols=208 Identities=22% Similarity=0.229 Sum_probs=114.5
Q ss_pred CCCeEEEEEeEeecCh-hhhh-hhccCCccccCCCCCcccc-cceeEEEEeec-CCCCCCCCCCEEEEecCCCCC-----
Q 017901 55 KPNEVLVRTRAVSINP-LDTR-MRSGYGRSIFEPLLPLILG-RDISGEVAAVG-ASVRSLTVGQEVFGALHPTAV----- 125 (364)
Q Consensus 55 ~~~eVlV~v~~~~i~~-~D~~-~~~g~~~~~~~~~~p~~~G-~e~~G~V~~vG-~~~~~~~~Gd~V~~~~~~~~~----- 125 (364)
..+||+|+.-+..-.+ +|-. .-.|.. ..+ +.--+.+ .|.+=.|.+-- ++..-|+.|+..+.+.+....
T Consensus 29 ~GheVlVe~gAG~gsg~~D~~Y~~aGA~--Iv~-ta~~vw~~~dmvvKvKEP~~~EY~ylregqiLftyLHLA~~~~lt~ 105 (371)
T COG0686 29 HGHEVLVETGAGAGSGFDDDDYEAAGAK--IVA-TAAEVWAEADMVVKVKEPLPSEYPYLREGQILFTYLHLAASPELTE 105 (371)
T ss_pred CCcEEEEecCCcCCCCCChHHHHHcCCE--Eec-CHHHhhcccceEEEecCCChhhhhhhcCCcEEEEEeeecCChHHHH
Confidence 5689999988765543 3332 223321 110 1112334 56666666532 234569999999887663210
Q ss_pred ----CCcc-eeEEee-cCCccccCCCCCChhhhccccchHHHHHHHHHHhc----------ccCCCCEEEEEcCCchHHH
Q 017901 126 ----RGTY-ADYAVL-SEDELTPKPVSVTHADASAIPFAALTAWRALKCAA----------RMSEGQRLLVLGGGGAVGF 189 (364)
Q Consensus 126 ----~g~~-~~~~~~-~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~----------~~~~g~~vli~g~~g~~G~ 189 (364)
.|.- -.|-.+ ..+.-.|+-- ++.+.|.-.....-|++.-+..+ .+.+ -+|.|.| .|.+|.
T Consensus 106 ~l~~~gvtaIayETV~~~~g~lPlLa--PMSeVAGrla~q~Ga~~lek~~GG~GvllgGvpGV~~-~kv~iiG-GGvvgt 181 (371)
T COG0686 106 ALLKSGVTAIAYETVQLPDGNLPLLA--PMSEVAGRLAAQAGAYYLEKTNGGKGVLLGGVPGVLP-AKVVVLG-GGVVGT 181 (371)
T ss_pred HHHHcCcceEEEEEEEcCCCCCcccc--hHHHHhhhHHHHHHHHHHHhccCCceeEecCCCCCCC-ccEEEEC-Cccccc
Confidence 0100 012222 1111222211 12222222222334454221111 1233 3467778 699999
Q ss_pred HHHHHHHHcCCeEEEeeCCcc-HHHHHH-cCCc-eeeeCCChhHHHHhcCCccEEEECC--CCc---h-hHHHHHhhccC
Q 017901 190 AAVQFSVASGCHVSATCGSKS-IDRVLA-AGAE-QAVDYSSKDIELAIKGKFDAVLDTI--GAP---E-TERLGLNFLKR 260 (364)
Q Consensus 190 ~~~~~a~~~g~~vi~~~~~~~-~~~~~~-~g~~-~v~~~~~~~~~~~i~g~~D~vid~~--g~~---~-~~~~~~~~l~~ 260 (364)
-++++|.-+|++|+....+.+ +..+.. ++-. ++.-.+...+.+.+.. .|++|.++ ++. . ..++.++.|+|
T Consensus 182 naAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~-aDlvIgaVLIpgakaPkLvt~e~vk~Mkp 260 (371)
T COG0686 182 NAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKK-ADLVIGAVLIPGAKAPKLVTREMVKQMKP 260 (371)
T ss_pred hHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhh-ccEEEEEEEecCCCCceehhHHHHHhcCC
Confidence 999999999999999976644 444433 3333 3344455577777776 99999863 221 1 45788999999
Q ss_pred CCEEEEEccC
Q 017901 261 GGHYMTLHGE 270 (364)
Q Consensus 261 ~G~~v~~g~~ 270 (364)
|+.+|.+...
T Consensus 261 GsVivDVAiD 270 (371)
T COG0686 261 GSVIVDVAID 270 (371)
T ss_pred CcEEEEEEEc
Confidence 9999998765
No 458
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.86 E-value=0.32 Score=42.31 Aligned_cols=73 Identities=26% Similarity=0.422 Sum_probs=46.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEe-eCCccH--HHH---HHcCCc-ee--eeCCChh-HHH---Hhc---CCc
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSAT-CGSKSI--DRV---LAAGAE-QA--VDYSSKD-IEL---AIK---GKF 238 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~-~~~~~~--~~~---~~~g~~-~v--~~~~~~~-~~~---~i~---g~~ 238 (364)
+++++|.|++|.+|..++..+...|++|+.+ .++.+. ... ...+.. .+ .|..+.+ +.. .+. +++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999888889999888 665443 222 222221 12 2333322 211 111 359
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (247)
T PRK05565 85 DILVNNAGI 93 (247)
T ss_pred CEEEECCCc
Confidence 999998875
No 459
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=93.85 E-value=1.4 Score=33.38 Aligned_cols=90 Identities=16% Similarity=0.123 Sum_probs=61.5
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeC--CChhHHHHhc-CCccEEEECCCCchhH--
Q 017901 178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDY--SSKDIELAIK-GKFDAVLDTIGAPETE-- 251 (364)
Q Consensus 178 vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~--~~~~~~~~i~-g~~D~vid~~g~~~~~-- 251 (364)
|+|.| .|.+|...++.++..+.+|+.+..+++. +.+++.|.. ++.. .+.+...... .+++.++-+++.+..-
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~~ 78 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVE-VIYGDATDPEVLERAGIEKADAVVILTDDDEENLL 78 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSHHHHHHTTGGCESEEEEESSSHHHHHH
T ss_pred eEEEc-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccc-cccccchhhhHHhhcCccccCEEEEccCCHHHHHH
Confidence 57888 7999999999999977689999888776 778888865 4433 3334444433 2399999999886322
Q ss_pred -HHHHhhccCCCEEEEEcc
Q 017901 252 -RLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 252 -~~~~~~l~~~G~~v~~g~ 269 (364)
...++.+.+..+++....
T Consensus 79 ~~~~~r~~~~~~~ii~~~~ 97 (116)
T PF02254_consen 79 IALLARELNPDIRIIARVN 97 (116)
T ss_dssp HHHHHHHHTTTSEEEEEES
T ss_pred HHHHHHHHCCCCeEEEEEC
Confidence 234444556677776654
No 460
>PLN00203 glutamyl-tRNA reductase
Probab=93.85 E-value=0.6 Score=45.65 Aligned_cols=72 Identities=18% Similarity=0.242 Sum_probs=49.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCc
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP 248 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~ 248 (364)
+.+|+|.| +|.+|.++++.+...|+ +|+++.++.++ .++.+++...+....-.+..+.+.+ +|+||.|++.+
T Consensus 266 ~kkVlVIG-AG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~dl~~al~~-aDVVIsAT~s~ 340 (519)
T PLN00203 266 SARVLVIG-AGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLDEMLACAAE-ADVVFTSTSSE 340 (519)
T ss_pred CCEEEEEe-CHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHhhHHHHHhc-CCEEEEccCCC
Confidence 68899999 69999999999999997 68777777554 3444553111111111234444555 99999999875
No 461
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.84 E-value=0.38 Score=42.10 Aligned_cols=73 Identities=22% Similarity=0.275 Sum_probs=46.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCC-ccH--HHHHHcCCc-ee--eeCCCh-hH---HHHhc---CC-ccE
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGS-KSI--DRVLAAGAE-QA--VDYSSK-DI---ELAIK---GK-FDA 240 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~-~~~--~~~~~~g~~-~v--~~~~~~-~~---~~~i~---g~-~D~ 240 (364)
+++++|+||+|.+|..++..+...|++|+.+.++ ... ....+++.. .+ .|..+. ++ .+.+. |+ +|+
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~ 84 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT 84 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence 5789999999999999999998899999877543 222 223333322 11 233332 22 22221 43 899
Q ss_pred EEECCCC
Q 017901 241 VLDTIGA 247 (364)
Q Consensus 241 vid~~g~ 247 (364)
+|.+.|.
T Consensus 85 li~~ag~ 91 (253)
T PRK08642 85 VVNNALA 91 (253)
T ss_pred EEECCCc
Confidence 9998763
No 462
>PRK07340 ornithine cyclodeaminase; Validated
Probab=93.84 E-value=0.49 Score=43.05 Aligned_cols=93 Identities=15% Similarity=0.026 Sum_probs=60.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHH-cCC-eEEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCc
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVA-SGC-HVSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP 248 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~-~g~-~vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~ 248 (364)
....+++|.| +|..|...+..+.. .+. +|....++.++ .++.++.... +.....+..+.+.+ +|+|+.|+.+.
T Consensus 123 ~~~~~v~IiG-aG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~-~~~~~~~~~~av~~-aDiVitaT~s~ 199 (304)
T PRK07340 123 APPGDLLLIG-TGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALG-PTAEPLDGEAIPEA-VDLVVTATTSR 199 (304)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcC-CeeEECCHHHHhhc-CCEEEEccCCC
Confidence 4667899999 89999999888865 565 45555665543 4444443210 01001234445556 99999999986
Q ss_pred hhHHHHHhhccCCCEEEEEccC
Q 017901 249 ETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 249 ~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
..+-.. .+++|-++..+|..
T Consensus 200 ~Pl~~~--~~~~g~hi~~iGs~ 219 (304)
T PRK07340 200 TPVYPE--AARAGRLVVAVGAF 219 (304)
T ss_pred CceeCc--cCCCCCEEEecCCC
Confidence 433333 47999999999865
No 463
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=93.82 E-value=0.38 Score=39.08 Aligned_cols=81 Identities=17% Similarity=0.243 Sum_probs=53.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCc------eeeeCC---ChhHHHHhcCCccEEEECCC
Q 017901 177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAE------QAVDYS---SKDIELAIKGKFDAVLDTIG 246 (364)
Q Consensus 177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~------~v~~~~---~~~~~~~i~g~~D~vid~~g 246 (364)
+|.|.| +|..|.+++..+...|.+|....++++. +.+++.+.. ..+..+ ..++.+.+.+ .|+++-++.
T Consensus 1 KI~ViG-aG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~-ad~IiiavP 78 (157)
T PF01210_consen 1 KIAVIG-AGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALED-ADIIIIAVP 78 (157)
T ss_dssp EEEEES-SSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT--SEEEE-S-
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCc-ccEEEeccc
Confidence 578999 8999999999999999999999888764 444443321 111111 2356666767 999999999
Q ss_pred CchhHHHHHhhccC
Q 017901 247 APETERLGLNFLKR 260 (364)
Q Consensus 247 ~~~~~~~~~~~l~~ 260 (364)
+. ..+..++.+++
T Consensus 79 s~-~~~~~~~~l~~ 91 (157)
T PF01210_consen 79 SQ-AHREVLEQLAP 91 (157)
T ss_dssp GG-GHHHHHHHHTT
T ss_pred HH-HHHHHHHHHhh
Confidence 87 55555555554
No 464
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=93.80 E-value=0.87 Score=38.17 Aligned_cols=95 Identities=24% Similarity=0.417 Sum_probs=59.8
Q ss_pred ccCCCCEEEEEcCCchHHHHHHHHHHH-cCCeEEEeeCCccH-----HHHHHcCCce--eeeCCChhHHHHhcCCccEEE
Q 017901 171 RMSEGQRLLVLGGGGAVGFAAVQFSVA-SGCHVSATCGSKSI-----DRVLAAGAEQ--AVDYSSKDIELAIKGKFDAVL 242 (364)
Q Consensus 171 ~~~~g~~vli~g~~g~~G~~~~~~a~~-~g~~vi~~~~~~~~-----~~~~~~g~~~--v~~~~~~~~~~~i~g~~D~vi 242 (364)
.++++.+|+-.|+ +.|..+..+++. .+++|+++..+++. +.+++.+.+. ++..+..++.. .+++|+|+
T Consensus 42 ~l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~--~~~fDlV~ 117 (187)
T PRK00107 42 YLPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ--EEKFDVVT 117 (187)
T ss_pred hcCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC--CCCccEEE
Confidence 3556889999984 246666666654 36799999776653 3345566543 22222222221 23599998
Q ss_pred ECCCC--chhHHHHHhhccCCCEEEEEcc
Q 017901 243 DTIGA--PETERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 243 d~~g~--~~~~~~~~~~l~~~G~~v~~g~ 269 (364)
-.... +..+..+.+.|++||+++.+-.
T Consensus 118 ~~~~~~~~~~l~~~~~~LkpGG~lv~~~~ 146 (187)
T PRK00107 118 SRAVASLSDLVELCLPLLKPGGRFLALKG 146 (187)
T ss_pred EccccCHHHHHHHHHHhcCCCeEEEEEeC
Confidence 75332 2467788999999999998854
No 465
>PRK06940 short chain dehydrogenase; Provisional
Probab=93.79 E-value=0.67 Score=41.40 Aligned_cols=94 Identities=19% Similarity=0.266 Sum_probs=57.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCc-ee--eeCCChh----HHHHhc--CCccE
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAE-QA--VDYSSKD----IELAIK--GKFDA 240 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~-~v--~~~~~~~----~~~~i~--g~~D~ 240 (364)
+++++|.|+ |++|..++..+. .|++|+.+.++++. +. +...+.. .. .|..+.+ +.+.+. +++|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 357899995 799999999885 79999999876542 22 2223332 12 2333322 222222 55999
Q ss_pred EEECCCCch---h---------------HHHHHhhccCCCEEEEEccC
Q 017901 241 VLDTIGAPE---T---------------ERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 241 vid~~g~~~---~---------------~~~~~~~l~~~G~~v~~g~~ 270 (364)
+|.+.|... . ++.+.+.++.+|+++.++..
T Consensus 80 li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~ 127 (275)
T PRK06940 80 LVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ 127 (275)
T ss_pred EEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence 999998531 1 23444555666777766543
No 466
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=93.77 E-value=0.29 Score=43.91 Aligned_cols=91 Identities=14% Similarity=0.185 Sum_probs=59.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCce-eeeCCCh-hHHHHhc-----CC-ccEEEECCCCc
Q 017901 177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQ-AVDYSSK-DIELAIK-----GK-FDAVLDTIGAP 248 (364)
Q Consensus 177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~-v~~~~~~-~~~~~i~-----g~-~D~vid~~g~~ 248 (364)
+|+|+||+|.+|..+++.+...|.+|.+++|+.+... ..+... ..|..+. ++...+. .. +|.+|-+.+..
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~--~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~ 78 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA--GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPI 78 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc--CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCC
Confidence 4899999999999999999989999999998765421 123322 2455554 3444441 23 89998877642
Q ss_pred ----hhHHHHHhhccCCC--EEEEEcc
Q 017901 249 ----ETERLGLNFLKRGG--HYMTLHG 269 (364)
Q Consensus 249 ----~~~~~~~~~l~~~G--~~v~~g~ 269 (364)
......++.++..| ++|..+.
T Consensus 79 ~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 79 PDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred CChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 13445556555554 6777754
No 467
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=93.77 E-value=0.31 Score=42.06 Aligned_cols=70 Identities=21% Similarity=0.275 Sum_probs=48.3
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHH-H-HHcCCce-eeeCCChh-HHHHhcC-CccEEEECCCC
Q 017901 178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDR-V-LAAGAEQ-AVDYSSKD-IELAIKG-KFDAVLDTIGA 247 (364)
Q Consensus 178 vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~-~-~~~g~~~-v~~~~~~~-~~~~i~g-~~D~vid~~g~ 247 (364)
|||.||+|-+|..++..+...|..|+++.+...... . .+..... ..|..+.+ +.+.+.+ ++|.||.+.+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeecc
Confidence 799999999999999999999999998887766532 2 2223221 23444443 3333331 27999999886
No 468
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.77 E-value=0.32 Score=42.10 Aligned_cols=70 Identities=20% Similarity=0.282 Sum_probs=45.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceee--eCCChhHHHHhc--CCccEEEECCCC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAV--DYSSKDIELAIK--GKFDAVLDTIGA 247 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~--~~~~~~~~~~i~--g~~D~vid~~g~ 247 (364)
.+++++|+|++|.+|...+..+...|++|+.+.++...... ... ..+ |..+. +.+... +++|+++.+.|.
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~--~~~-~~~~~D~~~~-~~~~~~~~~~id~lv~~ag~ 77 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLS--GNF-HFLQLDLSDD-LEPLFDWVPSVDILCNTAGI 77 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccC--CcE-EEEECChHHH-HHHHHHhhCCCCEEEECCCC
Confidence 46789999999999999999988889999998776432210 011 122 22221 121111 459999999883
No 469
>PRK05855 short chain dehydrogenase; Validated
Probab=93.70 E-value=0.29 Score=48.61 Aligned_cols=74 Identities=28% Similarity=0.373 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H----HHHHcCCce-e--eeCCChh----HHHHhc---CCc
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D----RVLAAGAEQ-A--VDYSSKD----IELAIK---GKF 238 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~----~~~~~g~~~-v--~~~~~~~----~~~~i~---g~~ 238 (364)
.+.+++|+||+|++|..+++.+...|++|+.+.++.+. + .+++.|... + .|..+.+ +.+.+. |++
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 45789999999999999999999999999998887543 2 223334321 1 2333332 222222 559
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|++|++.|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999885
No 470
>PRK12744 short chain dehydrogenase; Provisional
Probab=93.67 E-value=0.44 Score=41.91 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=29.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeC
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCG 207 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~ 207 (364)
.+++++|+|++|++|..+++.+...|++|+.+.+
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~ 40 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHY 40 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEec
Confidence 4678999999999999999999999999777643
No 471
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=93.67 E-value=1.1 Score=36.46 Aligned_cols=87 Identities=20% Similarity=0.179 Sum_probs=58.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHH--
Q 017901 177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERL-- 253 (364)
Q Consensus 177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~-- 253 (364)
+|-+.| .|.+|...++-+...|.+|++..++.++ +.+.+.|+. .. .+..++.+ . .|+||-|+........
T Consensus 3 ~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~-~~-~s~~e~~~---~-~dvvi~~v~~~~~v~~v~ 75 (163)
T PF03446_consen 3 KIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAE-VA-DSPAEAAE---Q-ADVVILCVPDDDAVEAVL 75 (163)
T ss_dssp EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEE-EE-SSHHHHHH---H-BSEEEE-SSSHHHHHHHH
T ss_pred EEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhh-hh-hhhhhHhh---c-ccceEeecccchhhhhhh
Confidence 688899 8999999999999999999998877665 666767743 22 22233333 3 8999999998645444
Q ss_pred ----HHhhccCCCEEEEEccC
Q 017901 254 ----GLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 254 ----~~~~l~~~G~~v~~g~~ 270 (364)
.+..++++..+|.++..
T Consensus 76 ~~~~i~~~l~~g~iiid~sT~ 96 (163)
T PF03446_consen 76 FGENILAGLRPGKIIIDMSTI 96 (163)
T ss_dssp HCTTHGGGS-TTEEEEE-SS-
T ss_pred hhhHHhhccccceEEEecCCc
Confidence 45556778888888654
No 472
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=93.66 E-value=0.58 Score=44.02 Aligned_cols=93 Identities=19% Similarity=0.268 Sum_probs=62.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCCe-EEEeeCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCch
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGCH-VSATCGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPE 249 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~~-vi~~~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~ 249 (364)
-.+.++++.| +|-+|.+++..+...|.+ ++.+.|+.++ +++.++|+. ++.. +++.+.+.. +|+||.++|.+.
T Consensus 176 L~~~~vlvIG-AGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l--~el~~~l~~-~DvVissTsa~~ 250 (414)
T COG0373 176 LKDKKVLVIG-AGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVAL--EELLEALAE-ADVVISSTSAPH 250 (414)
T ss_pred cccCeEEEEc-ccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecH--HHHHHhhhh-CCEEEEecCCCc
Confidence 4678999999 899999999999999974 5555666554 678999954 3322 234444445 999999999873
Q ss_pred h---HHHHHhhccCCC--EEEEEccC
Q 017901 250 T---ERLGLNFLKRGG--HYMTLHGE 270 (364)
Q Consensus 250 ~---~~~~~~~l~~~G--~~v~~g~~ 270 (364)
. .....+.++..- -+|.++.+
T Consensus 251 ~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 251 PIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred cccCHHHHHHHHhcccCeEEEEecCC
Confidence 2 234444444433 35555554
No 473
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=93.65 E-value=0.31 Score=40.06 Aligned_cols=94 Identities=18% Similarity=0.200 Sum_probs=62.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceeeeC-------------------C--ChhHHH
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAVDY-------------------S--SKDIEL 232 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~~~-------------------~--~~~~~~ 232 (364)
.-+|+|.| +|.+|..|+++++.+|++|+........ +.....++..+... . ...+.+
T Consensus 20 p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 36789999 8999999999999999999999766554 56667776543321 0 113444
Q ss_pred HhcCCccEEEECC---CC--ch-hHHHHHhhccCCCEEEEEccC
Q 017901 233 AIKGKFDAVLDTI---GA--PE-TERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 233 ~i~g~~D~vid~~---g~--~~-~~~~~~~~l~~~G~~v~~g~~ 270 (364)
.+.. +|++|-+. +. +. .....++.|+++..++.+...
T Consensus 99 ~i~~-~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D 141 (168)
T PF01262_consen 99 FIAP-ADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCD 141 (168)
T ss_dssp HHHH--SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGG
T ss_pred HHhh-CcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEec
Confidence 4445 89988532 21 11 236888999999999988654
No 474
>PRK08618 ornithine cyclodeaminase; Validated
Probab=93.64 E-value=0.62 Score=42.85 Aligned_cols=91 Identities=14% Similarity=0.132 Sum_probs=58.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHH-HHcCCe-EEEeeCCccH--HHHHH----cCCceeeeCCChhHHHHhcCCccEEEEC
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFS-VASGCH-VSATCGSKSI--DRVLA----AGAEQAVDYSSKDIELAIKGKFDAVLDT 244 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a-~~~g~~-vi~~~~~~~~--~~~~~----~g~~~v~~~~~~~~~~~i~g~~D~vid~ 244 (364)
+..++++|.| +|..|...+..+ ...+++ |....++.++ +++.+ .+.. +..++ +..+.+.+ .|+|+.|
T Consensus 125 ~~~~~v~iiG-aG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~--~~~~~~~~-aDiVi~a 199 (325)
T PRK08618 125 EDAKTLCLIG-TGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN--SADEAIEE-ADIIVTV 199 (325)
T ss_pred CCCcEEEEEC-CcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC--CHHHHHhc-CCEEEEc
Confidence 4567899999 899998777554 455775 4444555443 33333 3433 22222 23444445 9999999
Q ss_pred CCCchhHHHHHhhccCCCEEEEEccC
Q 017901 245 IGAPETERLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 245 ~g~~~~~~~~~~~l~~~G~~v~~g~~ 270 (364)
+++...+ .. +++++|-+++.+|..
T Consensus 200 T~s~~p~-i~-~~l~~G~hV~~iGs~ 223 (325)
T PRK08618 200 TNAKTPV-FS-EKLKKGVHINAVGSF 223 (325)
T ss_pred cCCCCcc-hH-HhcCCCcEEEecCCC
Confidence 9987333 34 899999999999865
No 475
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=93.63 E-value=0.4 Score=42.92 Aligned_cols=91 Identities=14% Similarity=0.175 Sum_probs=56.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH--HHHHHcCCce----eeeCCChhHHHHhcCCccEEEECC
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI--DRVLAAGAEQ----AVDYSSKDIELAIKGKFDAVLDTI 245 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~--~~~~~~g~~~----v~~~~~~~~~~~i~g~~D~vid~~ 245 (364)
.+|++++|.| +|+.+.+++..++..|+ +++.+.|+.++ +++..++... .....+.+..+ . +|++|+|+
T Consensus 124 ~~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~---~-~dliINaT 198 (283)
T COG0169 124 VTGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE---E-ADLLINAT 198 (283)
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc---c-cCEEEECC
Confidence 4589999999 79999999999999996 67777776654 3444444211 11111111111 2 89999998
Q ss_pred CCchhHH-----HHHhhccCCCEEEEEc
Q 017901 246 GAPETER-----LGLNFLKRGGHYMTLH 268 (364)
Q Consensus 246 g~~~~~~-----~~~~~l~~~G~~v~~g 268 (364)
+..-.-. ....++++.-.+..+-
T Consensus 199 p~Gm~~~~~~~~~~~~~l~~~~~v~D~v 226 (283)
T COG0169 199 PVGMAGPEGDSPVPAELLPKGAIVYDVV 226 (283)
T ss_pred CCCCCCCCCCCCCcHHhcCcCCEEEEec
Confidence 7531110 1145666766666664
No 476
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=93.60 E-value=0.6 Score=42.97 Aligned_cols=91 Identities=25% Similarity=0.285 Sum_probs=63.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCce------eee---CCChhHHHHhcCCccEEEECC
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQ------AVD---YSSKDIELAIKGKFDAVLDTI 245 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~------v~~---~~~~~~~~~i~g~~D~vid~~ 245 (364)
.+|.|.| .|.+|.+.+..+...|.+|....+++++ +.+.+.+.+. .+. ....+..+.+.. +|+||-|+
T Consensus 5 m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~-aD~Vi~~v 82 (328)
T PRK14618 5 MRVAVLG-AGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAG-ADFAVVAV 82 (328)
T ss_pred CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcC-CCEEEEEC
Confidence 4689999 8999999999998889999988886554 4444432110 000 011233444445 99999999
Q ss_pred CCchhHHHHHhhccCCCEEEEEcc
Q 017901 246 GAPETERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 246 g~~~~~~~~~~~l~~~G~~v~~g~ 269 (364)
... .+...++.++++-.++.+..
T Consensus 83 ~~~-~~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 83 PSK-ALRETLAGLPRALGYVSCAK 105 (328)
T ss_pred chH-HHHHHHHhcCcCCEEEEEee
Confidence 998 67888888888877776653
No 477
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=93.58 E-value=0.37 Score=49.06 Aligned_cols=74 Identities=22% Similarity=0.351 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-H-HHHH----cCCce----eeeCCChh-HH---HHhc---C
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-D-RVLA----AGAEQ----AVDYSSKD-IE---LAIK---G 236 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~-~~~~----~g~~~----v~~~~~~~-~~---~~i~---g 236 (364)
.+++++|+|++|++|..+++.+...|++|+.+.++.+. + ...+ .+... ..|..+.+ +. +.+. |
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 47899999999999999999999999999999876543 2 1222 22211 22333332 22 2221 4
Q ss_pred CccEEEECCCC
Q 017901 237 KFDAVLDTIGA 247 (364)
Q Consensus 237 ~~D~vid~~g~ 247 (364)
++|++|.+.|.
T Consensus 493 ~iDilV~nAG~ 503 (676)
T TIGR02632 493 GVDIVVNNAGI 503 (676)
T ss_pred CCcEEEECCCC
Confidence 59999999985
No 478
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=93.47 E-value=0.26 Score=39.51 Aligned_cols=90 Identities=17% Similarity=0.228 Sum_probs=58.4
Q ss_pred EEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeC-------CC-hhHH-HHhcCCccEEEECCCCc
Q 017901 178 LLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDY-------SS-KDIE-LAIKGKFDAVLDTIGAP 248 (364)
Q Consensus 178 vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~-------~~-~~~~-~~i~g~~D~vid~~g~~ 248 (364)
|+|.| +|.+|...+..++..|.+|..+.+++..+..++.|....... .. .... ... +++|++|-|+-+.
T Consensus 1 I~I~G-~GaiG~~~a~~L~~~g~~V~l~~r~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~D~viv~vKa~ 78 (151)
T PF02558_consen 1 ILIIG-AGAIGSLYAARLAQAGHDVTLVSRSPRLEAIKEQGLTITGPDGDETVQPPIVISAPSADA-GPYDLVIVAVKAY 78 (151)
T ss_dssp EEEES-TSHHHHHHHHHHHHTTCEEEEEESHHHHHHHHHHCEEEEETTEEEEEEEEEEESSHGHHH-STESEEEE-SSGG
T ss_pred CEEEC-cCHHHHHHHHHHHHCCCceEEEEccccHHhhhheeEEEEecccceecccccccCcchhcc-CCCcEEEEEeccc
Confidence 67889 899999998888889999999999884465666664311111 00 0011 122 3499999999875
Q ss_pred ---hhHHHHHhhccCCCEEEEEcc
Q 017901 249 ---ETERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 249 ---~~~~~~~~~l~~~G~~v~~g~ 269 (364)
..++.+...+.++..++++.+
T Consensus 79 ~~~~~l~~l~~~~~~~t~iv~~qN 102 (151)
T PF02558_consen 79 QLEQALQSLKPYLDPNTTIVSLQN 102 (151)
T ss_dssp GHHHHHHHHCTGEETTEEEEEESS
T ss_pred chHHHHHHHhhccCCCcEEEEEeC
Confidence 234455556666777777754
No 479
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=93.45 E-value=0.21 Score=46.19 Aligned_cols=88 Identities=18% Similarity=0.248 Sum_probs=53.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCeE---EEeeCCccH-HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHH
Q 017901 177 RLLVLGGGGAVGFAAVQFSVASGCHV---SATCGSKSI-DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETER 252 (364)
Q Consensus 177 ~vli~g~~g~~G~~~~~~a~~~g~~v---i~~~~~~~~-~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~ 252 (364)
+|.|.||+|.+|..+++++...+..+ ..+.+.... ..+...|.+.++..-+ ...+.+ +|++|.|+|...+..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~---~~~~~~-~D~v~~a~g~~~s~~ 76 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK---IESFEG-IDIALFSAGGSVSKE 76 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCCeeEEEEeCC---hHHhcC-CCEEEECCCHHHHHH
Confidence 47899999999999999998865543 333343322 2222223332332111 122345 999999999985555
Q ss_pred HHHhhccCCCEEEEEc
Q 017901 253 LGLNFLKRGGHYMTLH 268 (364)
Q Consensus 253 ~~~~~l~~~G~~v~~g 268 (364)
.+-++++.|-++|...
T Consensus 77 ~a~~~~~~G~~VID~s 92 (339)
T TIGR01296 77 FAPKAAKCGAIVIDNT 92 (339)
T ss_pred HHHHHHHCCCEEEECC
Confidence 5555556666676555
No 480
>PF03447 NAD_binding_3: Homoserine dehydrogenase, NAD binding domain; InterPro: IPR005106 Bacteria, plants and fungi metabolise aspartic acid to produce four amino acids - lysine, threonine, methionine and isoleucine - in a series of reactions known as the aspartate pathway. Additionally, several important metabolic intermediates are produced by these reactions, such as diaminopimelic acid, an essential component of bacterial cell wall biosynthesis, and dipicolinic acid, which is involved in sporulation in Gram-positive bacteria. Members of the animal kingdom do not posses this pathway and must therefore acquire these essential amino acids through their diet. Research into improving the metabolic flux through this pathway has the potential to increase the yield of the essential amino acids in important crops, thus improving their nutritional value. Additionally, since the enzymes are not present in animals, inhibitors of them are promising targets for the development of novel antibiotics and herbicides. For more information see []. Homoserine dehydrogenase (1.1.1.3 from EC) catalyses the third step in the aspartate pathway; theNAD(P)-dependent reduction of aspartate beta-semialdehyde into homoserine [, ]. Homoserine is an intermediate in the biosynthesis of threonine, isoleucine, and methionine. The enzyme can be found in a monofunctional form, in some bacteria and yeast, or a bifunctional form consisting of an N-terminal aspartokinase domain and a C-terminal homoserine dehydrogenase domain, as found in bacteria such as Escherichia coli and in plants. Structural analysis of the yeast monofunctional enzyme (P31116 from SWISSPROT) indicates that the enzyme is a dimer composed of three distinct regions; an N-terminal nucleotide-binding domain, a short central dimerisation region, and a C-terminal catalytic domain []. The N-terminal domain forms a modified Rossman fold, while the catalytic domain forms a novel alpha-beta mixed sheet. This entry represents the NAD(P)-binding domain of aspartate and homoserine dehydrogenase. Asparate dehydrogenase (1.4.1.21 from EC) is strictly specific for L-aspartate as substrate and catalyses the first step in NAD biosynthesis from aspartate. The enzyme has a higher affinity for NAD+ than NADP+ []. Note that the C terminus of the protein contributes a helix to this domain that is not covered by this model.; GO: 0016491 oxidoreductase activity, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 3ING_A 3MTJ_A 3DO5_A 3JSA_A 3C8M_A 1J5P_A 1H2H_A 2EJW_E 1TVE_A 1EBU_D ....
Probab=93.43 E-value=0.17 Score=38.71 Aligned_cols=83 Identities=16% Similarity=0.107 Sum_probs=50.4
Q ss_pred CchHHHHHHHHHHHc----CCeEEEeeCCcc---HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhHHHHHh
Q 017901 184 GGAVGFAAVQFSVAS----GCHVSATCGSKS---IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETERLGLN 256 (364)
Q Consensus 184 ~g~~G~~~~~~a~~~----g~~vi~~~~~~~---~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~~~~~~ 256 (364)
.|.+|...+...+.. +.++.+++.+.. ............. .+-+++.+.. . .|+|+||.+.......+.+
T Consensus 2 ~G~VG~~l~~~l~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~-~dvvVE~t~~~~~~~~~~~ 78 (117)
T PF03447_consen 2 FGNVGRGLLEQLKEQQERIDLEVVGVADRSMLISKDWAASFPDEAFT-TDLEELIDDP-D-IDVVVECTSSEAVAEYYEK 78 (117)
T ss_dssp -SHHHHHHHHHHHHTHHHCEEEEEEEEESSEEEETTHHHHHTHSCEE-SSHHHHHTHT-T--SEEEE-SSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCcccCCEEEEEEEECCchhhhhhhhhccccccc-CCHHHHhcCc-C-CCEEEECCCchHHHHHHHH
Confidence 799999998888765 568888865541 1222222221121 2222333322 3 9999999877766677889
Q ss_pred hccCCCEEEEEcc
Q 017901 257 FLKRGGHYMTLHG 269 (364)
Q Consensus 257 ~l~~~G~~v~~g~ 269 (364)
+|+.|=.+|+...
T Consensus 79 ~L~~G~~VVt~nk 91 (117)
T PF03447_consen 79 ALERGKHVVTANK 91 (117)
T ss_dssp HHHTTCEEEES-H
T ss_pred HHHCCCeEEEECH
Confidence 9999989988853
No 481
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=93.43 E-value=1.3 Score=32.38 Aligned_cols=84 Identities=20% Similarity=0.223 Sum_probs=53.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHcC---CeEEEe-eCCccH--HHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh
Q 017901 177 RLLVLGGGGAVGFAAVQFSVASG---CHVSAT-CGSKSI--DRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET 250 (364)
Q Consensus 177 ~vli~g~~g~~G~~~~~~a~~~g---~~vi~~-~~~~~~--~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~ 250 (364)
++.+.| .|.+|.+.++-+...| .+|+.+ .++.++ ++.++.+.... ..+. .+.+.. .|+||-|+... .
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~-~~~~---~~~~~~-advvilav~p~-~ 73 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQAT-ADDN---EEAAQE-ADVVILAVKPQ-Q 73 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEE-SEEH---HHHHHH-TSEEEE-S-GG-G
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccc-cCCh---HHhhcc-CCEEEEEECHH-H
Confidence 466778 8999999999999999 788855 666654 45567775422 2122 333333 89999999987 4
Q ss_pred HHHHHh---hccCCCEEEEE
Q 017901 251 ERLGLN---FLKRGGHYMTL 267 (364)
Q Consensus 251 ~~~~~~---~l~~~G~~v~~ 267 (364)
+...++ ...++..+|.+
T Consensus 74 ~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 74 LPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp HHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHhhccCCCEEEEe
Confidence 444443 34566666665
No 482
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=93.42 E-value=1.2 Score=36.04 Aligned_cols=89 Identities=26% Similarity=0.258 Sum_probs=61.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCc---
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAP--- 248 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~--- 248 (364)
.+++|.|.| -|..|.+.++-+|..|.+|+...++.. .+.+++-|.. +. +..+.++. .|+|+-.+...
T Consensus 3 ~~k~IAViG-yGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~-v~-----~~~eAv~~-aDvV~~L~PD~~q~ 74 (165)
T PF07991_consen 3 KGKTIAVIG-YGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFE-VM-----SVAEAVKK-ADVVMLLLPDEVQP 74 (165)
T ss_dssp CTSEEEEES--SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-E-CC-----EHHHHHHC--SEEEE-S-HHHHH
T ss_pred CCCEEEEEC-CChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCe-ec-----cHHHHHhh-CCEEEEeCChHHHH
Confidence 478999999 789999999999999999998877665 3778888875 32 35556655 99999999875
Q ss_pred hhH-HHHHhhccCCCEEEEEccC
Q 017901 249 ETE-RLGLNFLKRGGHYMTLHGE 270 (364)
Q Consensus 249 ~~~-~~~~~~l~~~G~~v~~g~~ 270 (364)
..+ ......|++|-.+++..+.
T Consensus 75 ~vy~~~I~p~l~~G~~L~fahGf 97 (165)
T PF07991_consen 75 EVYEEEIAPNLKPGATLVFAHGF 97 (165)
T ss_dssp HHHHHHHHHHS-TT-EEEESSSH
T ss_pred HHHHHHHHhhCCCCCEEEeCCcc
Confidence 233 4555688999888776554
No 483
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=93.40 E-value=2.9 Score=36.67 Aligned_cols=96 Identities=15% Similarity=0.149 Sum_probs=58.7
Q ss_pred cccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCC-ceeeeCCChhHHHHhcCCccEEEECCCC
Q 017901 170 ARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGA-EQAVDYSSKDIELAIKGKFDAVLDTIGA 247 (364)
Q Consensus 170 ~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~-~~v~~~~~~~~~~~i~g~~D~vid~~g~ 247 (364)
....++.+||-.| +|. |..+..+++ .|.+|+++..+++. +.+++... ...+..+..++. .-.+.+|+|+....-
T Consensus 38 l~~~~~~~vLDiG-cG~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~~~~~-~~~~~fD~V~s~~~l 113 (251)
T PRK10258 38 LPQRKFTHVLDAG-CGP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDIESLP-LATATFDLAWSNLAV 113 (251)
T ss_pred cCccCCCeEEEee-CCC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCcccCc-CCCCcEEEEEECchh
Confidence 3344678899998 453 666655554 58899999777664 55555432 122222211111 001349999875431
Q ss_pred ------chhHHHHHhhccCCCEEEEEcc
Q 017901 248 ------PETERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 248 ------~~~~~~~~~~l~~~G~~v~~g~ 269 (364)
...+..+.+.|++||.++....
T Consensus 114 ~~~~d~~~~l~~~~~~Lk~gG~l~~~~~ 141 (251)
T PRK10258 114 QWCGNLSTALRELYRVVRPGGVVAFTTL 141 (251)
T ss_pred hhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 2367889999999999987653
No 484
>PRK08219 short chain dehydrogenase; Provisional
Probab=93.39 E-value=0.48 Score=40.63 Aligned_cols=71 Identities=15% Similarity=0.255 Sum_probs=46.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHH-HcCCceee--eCCCh-hHHHHhc--CCccEEEECCCC
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVL-AAGAEQAV--DYSSK-DIELAIK--GKFDAVLDTIGA 247 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~-~~g~~~v~--~~~~~-~~~~~i~--g~~D~vid~~g~ 247 (364)
++++|.||+|.+|..++..+... .+|+++.++... +.+. +....+++ |..+. ++...+. +++|.+|.+.|.
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence 57999999999999999888777 899999887543 2222 22111222 33332 2223222 249999999885
No 485
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=93.39 E-value=0.86 Score=41.97 Aligned_cols=86 Identities=17% Similarity=0.270 Sum_probs=61.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh---
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET--- 250 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~--- 250 (364)
.|.+|.|.| .|.+|..+++.++.+|.+|++..+..+... ... .+ ..++.+.+.. .|+|+.++.....
T Consensus 145 ~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~----~~~---~~-~~~l~ell~~-aDiVil~lP~t~~t~~ 214 (330)
T PRK12480 145 KNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDL----DFL---TY-KDSVKEAIKD-ADIISLHVPANKESYH 214 (330)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhh----hhh---hc-cCCHHHHHhc-CCEEEEeCCCcHHHHH
Confidence 567899999 899999999999999999999876654321 000 01 1234444445 8999999886521
Q ss_pred --HHHHHhhccCCCEEEEEcc
Q 017901 251 --ERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 251 --~~~~~~~l~~~G~~v~~g~ 269 (364)
....+..++++..+|.++-
T Consensus 215 li~~~~l~~mk~gavlIN~aR 235 (330)
T PRK12480 215 LFDKAMFDHVKKGAILVNAAR 235 (330)
T ss_pred HHhHHHHhcCCCCcEEEEcCC
Confidence 2456678899998888874
No 486
>PRK05599 hypothetical protein; Provisional
Probab=93.39 E-value=0.38 Score=42.18 Aligned_cols=70 Identities=16% Similarity=0.249 Sum_probs=45.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--HH---HHHcCCc--ee--eeCCCh----hHHHHhc---CCccE
Q 017901 177 RLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--DR---VLAAGAE--QA--VDYSSK----DIELAIK---GKFDA 240 (364)
Q Consensus 177 ~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~~---~~~~g~~--~v--~~~~~~----~~~~~i~---g~~D~ 240 (364)
+++|+|+++++|...++.+. .|++|+.+.++++. +. +++.|.+ .. .|..+. .+.+.+. |++|+
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 80 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL 80 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence 68999999999999988776 59999998876543 22 3334432 12 233332 2222222 56999
Q ss_pred EEECCCC
Q 017901 241 VLDTIGA 247 (364)
Q Consensus 241 vid~~g~ 247 (364)
++.+.|.
T Consensus 81 lv~nag~ 87 (246)
T PRK05599 81 AVVAFGI 87 (246)
T ss_pred EEEecCc
Confidence 9998875
No 487
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=93.38 E-value=0.68 Score=46.03 Aligned_cols=92 Identities=15% Similarity=0.070 Sum_probs=64.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCceee-eCCChhHHHHhc-CCccEEEECCCCchh--
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAEQAV-DYSSKDIELAIK-GKFDAVLDTIGAPET-- 250 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~~v~-~~~~~~~~~~i~-g~~D~vid~~g~~~~-- 250 (364)
++++|.| .|.+|+..++.++..|.+++++..++++ +.+++.|...+. |..+++..++.. .++|.++-+++++..
T Consensus 418 ~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~~~~~~ 496 (558)
T PRK10669 418 NHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPNGYEAG 496 (558)
T ss_pred CCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCChHHHH
Confidence 6789999 8999999999999999999999887776 777888876443 333444444443 349988888877522
Q ss_pred -HHHHHhhccCCCEEEEEc
Q 017901 251 -ERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 251 -~~~~~~~l~~~G~~v~~g 268 (364)
+-.+.+...+.-+++...
T Consensus 497 ~iv~~~~~~~~~~~iiar~ 515 (558)
T PRK10669 497 EIVASAREKRPDIEIIARA 515 (558)
T ss_pred HHHHHHHHHCCCCeEEEEE
Confidence 223445556666777654
No 488
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=93.35 E-value=0.62 Score=39.41 Aligned_cols=97 Identities=20% Similarity=0.218 Sum_probs=58.1
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH----HHHcCCceeeeCCChhHHHH-hcCCccEE
Q 017901 168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR----VLAAGAEQAVDYSSKDIELA-IKGKFDAV 241 (364)
Q Consensus 168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~----~~~~g~~~v~~~~~~~~~~~-i~g~~D~v 241 (364)
+.....++.+||-.| +| .|..+..+++. |.+|+++..++.. +. +...+...+ +....++.+. ..+++|+|
T Consensus 24 ~~l~~~~~~~vLDiG-cG-~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d~~~~~~~~~fD~I 99 (197)
T PRK11207 24 EAVKVVKPGKTLDLG-CG-NGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNL-HTAVVDLNNLTFDGEYDFI 99 (197)
T ss_pred HhcccCCCCcEEEEC-CC-CCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecChhhCCcCCCcCEE
Confidence 334456778899998 33 47788888875 8899999776543 32 333333211 1111111111 12349999
Q ss_pred EECCC----C----chhHHHHHhhccCCCEEEEEc
Q 017901 242 LDTIG----A----PETERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 242 id~~g----~----~~~~~~~~~~l~~~G~~v~~g 268 (364)
+.+.. . ...+..+.++|++||.++.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~ 134 (197)
T PRK11207 100 LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 134 (197)
T ss_pred EEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 87543 1 135778889999999965543
No 489
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.35 E-value=0.49 Score=41.48 Aligned_cols=72 Identities=21% Similarity=0.309 Sum_probs=47.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH---HH---HHHcCCc-ee--eeCCChh----HHHHhc---CCcc
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI---DR---VLAAGAE-QA--VDYSSKD----IELAIK---GKFD 239 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~---~~---~~~~g~~-~v--~~~~~~~----~~~~i~---g~~D 239 (364)
++++|+|++|.+|..+++.+...|++|+.+.+.... .. ++..+.. .+ .|..+.+ +.+.+. +++|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999999999999998765321 11 2222322 12 2333322 222332 4599
Q ss_pred EEEECCCC
Q 017901 240 AVLDTIGA 247 (364)
Q Consensus 240 ~vid~~g~ 247 (364)
++|.+.|.
T Consensus 83 ~vi~~ag~ 90 (256)
T PRK12745 83 CLVNNAGV 90 (256)
T ss_pred EEEECCcc
Confidence 99999874
No 490
>PRK06101 short chain dehydrogenase; Provisional
Probab=93.34 E-value=0.35 Score=42.10 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=31.6
Q ss_pred CEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH
Q 017901 176 QRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI 211 (364)
Q Consensus 176 ~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~ 211 (364)
.+++|+||+|++|...+..+...|++|+++.++++.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~ 37 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSV 37 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 468999999999999888888899999999887654
No 491
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=93.33 E-value=0.91 Score=39.09 Aligned_cols=90 Identities=14% Similarity=0.134 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCc--cHHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchhH
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSK--SIDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPETE 251 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~--~~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~~ 251 (364)
.+.+|||.| +|.++.-=++.+...|++|++++..- +...+.+.|.-..+. ..-+ ...+.| +++||.|++.+ .+
T Consensus 24 ~~~~VLVVG-GG~VA~RK~~~Ll~~gA~VtVVap~i~~el~~l~~~~~i~~~~-r~~~-~~dl~g-~~LViaATdD~-~v 98 (223)
T PRK05562 24 NKIKVLIIG-GGKAAFIKGKTFLKKGCYVYILSKKFSKEFLDLKKYGNLKLIK-GNYD-KEFIKD-KHLIVIATDDE-KL 98 (223)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCCCHHHHHHHhCCCEEEEe-CCCC-hHHhCC-CcEEEECCCCH-HH
Confidence 477899999 79999888888888999988885432 322232333222221 1101 122346 99999999998 55
Q ss_pred HHHH-hhccCCCEEEEEc
Q 017901 252 RLGL-NFLKRGGHYMTLH 268 (364)
Q Consensus 252 ~~~~-~~l~~~G~~v~~g 268 (364)
+..+ ...+..+.++...
T Consensus 99 N~~I~~~a~~~~~lvn~v 116 (223)
T PRK05562 99 NNKIRKHCDRLYKLYIDC 116 (223)
T ss_pred HHHHHHHHHHcCCeEEEc
Confidence 5444 4444546666554
No 492
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.33 E-value=0.55 Score=40.73 Aligned_cols=73 Identities=29% Similarity=0.367 Sum_probs=46.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH--H-H---HHHcCCc-ee--eeCCChh-HHH---Hhc---CCc
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI--D-R---VLAAGAE-QA--VDYSSKD-IEL---AIK---GKF 238 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~--~-~---~~~~g~~-~v--~~~~~~~-~~~---~i~---g~~ 238 (364)
..+++|.|++|.+|..+++.+...|.+|+.+.++... + . ....+.. +. .|..+.+ +.+ .+. +++
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 85 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRI 85 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999998877655432 1 1 2223322 12 2333322 222 221 348
Q ss_pred cEEEECCCC
Q 017901 239 DAVLDTIGA 247 (364)
Q Consensus 239 D~vid~~g~ 247 (364)
|.+|.+.|.
T Consensus 86 d~vi~~ag~ 94 (249)
T PRK12825 86 DILVNNAGI 94 (249)
T ss_pred CEEEECCcc
Confidence 999999883
No 493
>PLN02366 spermidine synthase
Probab=93.32 E-value=2.8 Score=38.11 Aligned_cols=95 Identities=18% Similarity=0.160 Sum_probs=56.1
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHcCC-eEEEeeCCccH-HHHHHcC------C-c---eeeeCCChhHHHHh-cCCcc
Q 017901 173 SEGQRLLVLGGGGAVGFAAVQFSVASGC-HVSATCGSKSI-DRVLAAG------A-E---QAVDYSSKDIELAI-KGKFD 239 (364)
Q Consensus 173 ~~g~~vli~g~~g~~G~~~~~~a~~~g~-~vi~~~~~~~~-~~~~~~g------~-~---~v~~~~~~~~~~~i-~g~~D 239 (364)
.+.++||+.|+ |. |.++..++++.+. +|..+.-+++. +.+++.- . + .++..+...+.+.. .+++|
T Consensus 90 ~~pkrVLiIGg-G~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yD 167 (308)
T PLN02366 90 PNPKKVLVVGG-GD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYD 167 (308)
T ss_pred CCCCeEEEEcC-Cc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCC
Confidence 56789999994 33 6677788887654 67777555542 4443321 1 1 12222222333333 24599
Q ss_pred EEEECCCCc----------hhHHHHHhhccCCCEEEEEcc
Q 017901 240 AVLDTIGAP----------ETERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 240 ~vid~~g~~----------~~~~~~~~~l~~~G~~v~~g~ 269 (364)
+||--...+ ..+..+.++|+++|.++.-..
T Consensus 168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q~~ 207 (308)
T PLN02366 168 AIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQAE 207 (308)
T ss_pred EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEECcC
Confidence 987643321 246788999999999986543
No 494
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=93.30 E-value=1.2 Score=37.19 Aligned_cols=96 Identities=16% Similarity=0.231 Sum_probs=60.2
Q ss_pred HhcccCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHH----HHcCCce--eeeCCChhHHHHhcCCcc
Q 017901 168 CAARMSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRV----LAAGAEQ--AVDYSSKDIELAIKGKFD 239 (364)
Q Consensus 168 ~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~----~~~g~~~--v~~~~~~~~~~~i~g~~D 239 (364)
....+.+++++|=.| +| .|..++.+++.. +.+|+++..+++. +.+ ...+... ++..+ ......+++|
T Consensus 25 ~~l~~~~~~~vLDiG-~G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d---~~~~~~~~~D 99 (187)
T PRK08287 25 SKLELHRAKHLIDVG-AG-TGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGE---APIELPGKAD 99 (187)
T ss_pred HhcCCCCCCEEEEEC-Cc-CCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecC---chhhcCcCCC
Confidence 455677889998888 33 477777778765 4689999776653 332 3444332 22221 1112223499
Q ss_pred EEEECCCC---chhHHHHHhhccCCCEEEEEc
Q 017901 240 AVLDTIGA---PETERLGLNFLKRGGHYMTLH 268 (364)
Q Consensus 240 ~vid~~g~---~~~~~~~~~~l~~~G~~v~~g 268 (364)
+|+..... ...+..+.+.|+++|+++...
T Consensus 100 ~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~~ 131 (187)
T PRK08287 100 AIFIGGSGGNLTAIIDWSLAHLHPGGRLVLTF 131 (187)
T ss_pred EEEECCCccCHHHHHHHHHHhcCCCeEEEEEE
Confidence 99864321 235678899999999997753
No 495
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=93.28 E-value=0.33 Score=49.31 Aligned_cols=73 Identities=25% Similarity=0.253 Sum_probs=48.0
Q ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHc-CCeEEEeeCCccH-HHHHHc-CCceee--eCCC-hhH-HHHhcCCccEEEEC
Q 017901 172 MSEGQRLLVLGGGGAVGFAAVQFSVAS-GCHVSATCGSKSI-DRVLAA-GAEQAV--DYSS-KDI-ELAIKGKFDAVLDT 244 (364)
Q Consensus 172 ~~~g~~vli~g~~g~~G~~~~~~a~~~-g~~vi~~~~~~~~-~~~~~~-g~~~v~--~~~~-~~~-~~~i~g~~D~vid~ 244 (364)
.+++.+|||+||+|.+|..+++.+... |.+|+++.+.... ...... +.. .+ |..+ ..+ .+.+.+ +|+||.+
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~gDl~d~~~~l~~~l~~-~D~ViHl 389 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFH-FVEGDISIHSEWIEYHIKK-CDVVLPL 389 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceE-EEeccccCcHHHHHHHhcC-CCEEEEC
Confidence 356788999999999999999988875 7899999875542 111111 222 22 2222 222 333456 9999998
Q ss_pred CC
Q 017901 245 IG 246 (364)
Q Consensus 245 ~g 246 (364)
++
T Consensus 390 Aa 391 (660)
T PRK08125 390 VA 391 (660)
T ss_pred cc
Confidence 76
No 496
>PLN00198 anthocyanidin reductase; Provisional
Probab=93.28 E-value=0.45 Score=43.87 Aligned_cols=71 Identities=21% Similarity=0.328 Sum_probs=47.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HH---HHHc---CCceee--eCCCh-hHHHHhcCCccEEEEC
Q 017901 175 GQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DR---VLAA---GAEQAV--DYSSK-DIELAIKGKFDAVLDT 244 (364)
Q Consensus 175 g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~---~~~~---g~~~v~--~~~~~-~~~~~i~g~~D~vid~ 244 (364)
+.+|+|+||+|.+|..+++.+...|++|++++++... .. ...+ +.-.++ |..+. .+...+.+ +|+||.+
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~d~vih~ 87 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAG-CDLVFHV 87 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhc-CCEEEEe
Confidence 6789999999999999999999999999888765432 11 1111 111222 33333 33444445 9999998
Q ss_pred CC
Q 017901 245 IG 246 (364)
Q Consensus 245 ~g 246 (364)
.+
T Consensus 88 A~ 89 (338)
T PLN00198 88 AT 89 (338)
T ss_pred CC
Confidence 87
No 497
>PRK05479 ketol-acid reductoisomerase; Provisional
Probab=93.26 E-value=1 Score=41.22 Aligned_cols=88 Identities=23% Similarity=0.211 Sum_probs=59.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCcc--HHHHHHcCCceeeeCCChhHHHHhcCCccEEEECCCCchh-
Q 017901 174 EGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKS--IDRVLAAGAEQAVDYSSKDIELAIKGKFDAVLDTIGAPET- 250 (364)
Q Consensus 174 ~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~--~~~~~~~g~~~v~~~~~~~~~~~i~g~~D~vid~~g~~~~- 250 (364)
.+++|.|.| .|.+|.+.++-++..|.+|++..++.. ...+.+.|.. +. +..+.+.. .|+|+-++.....
T Consensus 16 ~gktIgIIG-~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~-~~-----s~~eaa~~-ADVVvLaVPd~~~~ 87 (330)
T PRK05479 16 KGKKVAIIG-YGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFE-VL-----TVAEAAKW-ADVIMILLPDEVQA 87 (330)
T ss_pred CCCEEEEEe-eHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCe-eC-----CHHHHHhc-CCEEEEcCCHHHHH
Confidence 578899999 899999999999999999887655433 2556666653 21 33444444 8999999997522
Q ss_pred --H-HHHHhhccCCCEEEEEcc
Q 017901 251 --E-RLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 251 --~-~~~~~~l~~~G~~v~~g~ 269 (364)
+ ......++++..++...+
T Consensus 88 ~V~~~~I~~~Lk~g~iL~~a~G 109 (330)
T PRK05479 88 EVYEEEIEPNLKEGAALAFAHG 109 (330)
T ss_pred HHHHHHHHhcCCCCCEEEECCC
Confidence 2 234445667766654443
No 498
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.25 E-value=0.45 Score=41.93 Aligned_cols=33 Identities=18% Similarity=0.217 Sum_probs=28.9
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHcCCeEEEee
Q 017901 174 EGQRLLVLGGG--GAVGFAAVQFSVASGCHVSATC 206 (364)
Q Consensus 174 ~g~~vli~g~~--g~~G~~~~~~a~~~g~~vi~~~ 206 (364)
.|++++|+|++ +++|..+++.+...|++|+.+.
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~ 39 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTY 39 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEe
Confidence 57899999987 4899999999999999998864
No 499
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=93.24 E-value=1.4 Score=34.21 Aligned_cols=89 Identities=19% Similarity=0.201 Sum_probs=50.7
Q ss_pred EEEEEcCCchHHHHHHHHHHH-cCCeEEEe-eCCcc----HHHHHHcCCc--eeeeCCChhHHHHhcCCccEEEECCCCc
Q 017901 177 RLLVLGGGGAVGFAAVQFSVA-SGCHVSAT-CGSKS----IDRVLAAGAE--QAVDYSSKDIELAIKGKFDAVLDTIGAP 248 (364)
Q Consensus 177 ~vli~g~~g~~G~~~~~~a~~-~g~~vi~~-~~~~~----~~~~~~~g~~--~v~~~~~~~~~~~i~g~~D~vid~~g~~ 248 (364)
+|.|+|++|.+|...++.+.. .+.++.+. .++.. ++.-.-.|.. .+.-+ .++.+.+.. +|++||++..+
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~--~~l~~~~~~-~DVvIDfT~p~ 78 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT--DDLEELLEE-ADVVIDFTNPD 78 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB--S-HHHHTTH--SEEEEES-HH
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc--hhHHHhccc-CCEEEEcCChH
Confidence 589999779999999999988 57787776 44431 1111112211 11111 234444434 99999999554
Q ss_pred hhHHHHHhhccCCCEEEEEcc
Q 017901 249 ETERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 249 ~~~~~~~~~l~~~G~~v~~g~ 269 (364)
.....++.+...|.-+.+|-
T Consensus 79 -~~~~~~~~~~~~g~~~ViGT 98 (124)
T PF01113_consen 79 -AVYDNLEYALKHGVPLVIGT 98 (124)
T ss_dssp -HHHHHHHHHHHHT-EEEEE-
T ss_pred -HhHHHHHHHHhCCCCEEEEC
Confidence 55555555555566666654
No 500
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=93.22 E-value=0.52 Score=41.89 Aligned_cols=102 Identities=15% Similarity=0.267 Sum_probs=63.1
Q ss_pred HHHhcccCCCCEEEEEcCCchHHHHHHHHHHHcCCeEEEeeCCccH-HHHHHcCCc-eeeeCCChhHHH-Hhc-CCccEE
Q 017901 166 LKCAARMSEGQRLLVLGGGGAVGFAAVQFSVASGCHVSATCGSKSI-DRVLAAGAE-QAVDYSSKDIEL-AIK-GKFDAV 241 (364)
Q Consensus 166 l~~~~~~~~g~~vli~g~~g~~G~~~~~~a~~~g~~vi~~~~~~~~-~~~~~~g~~-~v~~~~~~~~~~-~i~-g~~D~v 241 (364)
+.....+.++.+||=.| +| .|..+..+++..+++|+++..++.. +.+++.... .-+.....++.+ ... +.+|+|
T Consensus 44 ~l~~l~l~~~~~VLDiG-cG-~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~~~~~~~FD~V 121 (263)
T PTZ00098 44 ILSDIELNENSKVLDIG-SG-LGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKKDFPENTFDMI 121 (263)
T ss_pred HHHhCCCCCCCEEEEEc-CC-CChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccCCCCCCCeEEE
Confidence 33667889999999998 44 4666777777778999999776654 444432211 111111111111 011 349999
Q ss_pred EEC-----CC--C-chhHHHHHhhccCCCEEEEEcc
Q 017901 242 LDT-----IG--A-PETERLGLNFLKRGGHYMTLHG 269 (364)
Q Consensus 242 id~-----~g--~-~~~~~~~~~~l~~~G~~v~~g~ 269 (364)
+.. .+ . ...+..+.+.|+|||+++....
T Consensus 122 ~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 122 YSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred EEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 862 12 1 2367888999999999998754
Done!