BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017902
(364 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|79325179|ref|NP_001031674.1| protein OSB2 [Arabidopsis thaliana]
gi|332658861|gb|AEE84261.1| protein OSB2 [Arabidopsis thaliana]
Length = 371
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 153/323 (47%), Positives = 202/323 (62%), Gaps = 42/323 (13%)
Query: 44 ATTKTTTSKDVVWPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAA 103
A+ TT ++ P+P+EI ++ +VAN VNLIG VD PVQF+ SSDGK WAGTVI Q +A
Sbjct: 75 ASVTATTENEL--PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSA 132
Query: 104 SHS--LWIPILFEGDLAHIASSHLKKDDHVHIAGQLTAD--PPAIE-GQANVQVMVHSLN 158
S S WIPI+FEGDLA A+ ++ KDD +H++G+L D PP + QANVQV+V +LN
Sbjct: 133 SDSSGFWIPIIFEGDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLN 192
Query: 159 LIEPTS---QKRMFFVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRS 215
I+P S M S ++E + + I+ D A SW L++NP++W D+R
Sbjct: 193 FIQPMSPSPSPFMVMSSSEKEESGIKKQPGIAKQDIVIDEASDSWNHLIENPKEWWDHRE 252
Query: 216 DKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKK 275
+K+ GLVKPR+PDFK KD + LWLN AP+WVL +LEG+ FD P
Sbjct: 253 NKVNGLVKPRHPDFKSKDSSFSLWLNKAPNWVLPKLEGLEFDVLVP-------------- 298
Query: 276 SKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHK 335
K+ VK+ K ++ WKDLV+NPDKWWDNR+DK++ K PDFKHK
Sbjct: 299 ------------------KARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHK 340
Query: 336 ETGKPLWLNYSPAWVTSQLPPVK 358
ETG+ LWLN SP WV +LPPVK
Sbjct: 341 ETGEALWLNESPTWVLPKLPPVK 363
>gi|18415421|ref|NP_567593.1| protein OSB2 [Arabidopsis thaliana]
gi|259517764|sp|Q8GXH3.2|OSB2_ARATH RecName: Full=Protein OSB2, chloroplastic; AltName: Full=Organellar
single-stranded DNA-binding protein 2; AltName:
Full=Protein FLORAL ABSCISSION ASSOCIATED; AltName:
Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 9; Flags:
Precursor
gi|2827655|emb|CAA16609.1| hypothetical protein [Arabidopsis thaliana]
gi|7268796|emb|CAB79001.1| hypothetical protein [Arabidopsis thaliana]
gi|111074390|gb|ABH04568.1| At4g20010 [Arabidopsis thaliana]
gi|332658860|gb|AEE84260.1| protein OSB2 [Arabidopsis thaliana]
Length = 371
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/326 (47%), Positives = 206/326 (63%), Gaps = 48/326 (14%)
Query: 44 ATTKTTTSKDVVWPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAA 103
A+ TT ++ P+P+EI ++ +VAN VNLIG VD PVQF+ SSDGK WAGTVI Q +A
Sbjct: 75 ASVTATTENEL--PRPNEIAYESEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSA 132
Query: 104 SHS--LWIPILFEGDLAHIASSHLKKDDHVHIAGQLTAD--PPAIE-GQANVQVMVHSLN 158
S S WIPI+FEGDLA A+ ++ KDD +H++G+L D PP + QANVQV+V +LN
Sbjct: 133 SDSSGFWIPIIFEGDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLN 192
Query: 159 LIEPTSQKRMFFV----SKKQEAATVDHSVKISSSKKDG--DSALSSWRDLLDNPEQWRD 212
I+P S F+ S+K+E+ + +K+D D A SW L++NP++W D
Sbjct: 193 FIQPMSPSPSPFMVMSSSEKEESGIKKQPAR---AKQDIVIDEASDSWNHLIENPKEWWD 249
Query: 213 YRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNY 272
+R +K+ GLVKPR+PDFK KD + LWLN AP+WVL +LEG+ FD P
Sbjct: 250 HRENKVNGLVKPRHPDFKSKDSSFSLWLNKAPNWVLPKLEGLEFDVLVP----------- 298
Query: 273 VKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDF 332
K+ VK+ K ++ WKDLV+NPDKWWDNR+DK++ K PDF
Sbjct: 299 ---------------------KARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDF 337
Query: 333 KHKETGKPLWLNYSPAWVTSQLPPVK 358
KHKETG+ LWLN SP WV +LPPVK
Sbjct: 338 KHKETGEALWLNESPTWVLPKLPPVK 363
>gi|224121612|ref|XP_002330744.1| predicted protein [Populus trichocarpa]
gi|222872520|gb|EEF09651.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 168/369 (45%), Positives = 211/369 (57%), Gaps = 58/369 (15%)
Query: 7 RVMAQIGRSQTTVKRI----ILYSPAHFTRPFSSRAHQFTKATTKTT------TSKDVVW 56
RV+A+I SQ T +RI IL + + H T K T + +
Sbjct: 9 RVLAKIATSQPTTRRISPPLILLLQQSSCYSTNEKEHNPPTTTLKKTPPLYKKSPSSTDF 68
Query: 57 PKPSEIPFQVKVANSVNLIGHVDAPVQFQTSS-DGKHWAGTVIVQHAASHS--LWIPILF 113
P+P EIPFQ KVANS+NLIG++D P+Q Q SS D K A TVI Q + HS L IPI+F
Sbjct: 69 PRPKEIPFQAKVANSINLIGYIDMPIQTQVSSPDEKFRAATVITQEPSYHSPALRIPIIF 128
Query: 114 EGDLAHIASSHLKKDDHVHIAGQLTADPP---AIEGQANVQVMVHSLNLIEPTSQKRMFF 170
EGDLAHIA+SHLKK D V+I GQL+ DPP ++ Q VQV+V+S+N IE + Q +
Sbjct: 129 EGDLAHIAASHLKKGDFVYIDGQLSTDPPPFPEMQDQTQVQVLVNSINFIEGSFQVKKSI 188
Query: 171 VSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFK 230
+ ++ E D DG+S +SW DLL+NP QW DYRS K GLVKP++PDFK
Sbjct: 189 LEQQLEVPLDD----------DGESGSNSWTDLLENPNQWWDYRSSKRSGLVKPKHPDFK 238
Query: 231 RKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDD 290
K+ +WL AP W+ S LE V FD K L QT
Sbjct: 239 HKNNNQSVWLTGAPSWIFSGLEKVKFD-VKTALPTQT----------------------- 274
Query: 291 QTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNYSPAWV 350
K+ K ++ WKDLVENP KWWDNR+DKK+ K PDFKHKETG+ LWL+ SPAWV
Sbjct: 275 --------KQQKEEECWKDLVENPHKWWDNRVDKKNPKSPDFKHKETGEGLWLDTSPAWV 326
Query: 351 TSQLPPVKS 359
+LPP K
Sbjct: 327 LPKLPPTKG 335
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 261 PVLDDQTRKS------NYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENP 314
P + DQT+ N+++ S F K +L+ Q + + W DL+ENP
Sbjct: 160 PEMQDQTQVQVLVNSINFIEGS----FQVKKSILEQQLEVPLDDDGESGSNSWTDLLENP 215
Query: 315 DKWWDNRLDKKS----EKGPDFKHKETGKPLWLNYSPAWVTSQLPPVKSTVKS 363
++WWD R K+S K PDFKHK + +WL +P+W+ S L VK VK+
Sbjct: 216 NQWWDYRSSKRSGLVKPKHPDFKHKNNNQSVWLTGAPSWIFSGLEKVKFDVKT 268
>gi|297804136|ref|XP_002869952.1| hypothetical protein ARALYDRAFT_492872 [Arabidopsis lyrata subsp.
lyrata]
gi|297315788|gb|EFH46211.1| hypothetical protein ARALYDRAFT_492872 [Arabidopsis lyrata subsp.
lyrata]
Length = 365
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 150/309 (48%), Positives = 195/309 (63%), Gaps = 40/309 (12%)
Query: 58 KPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAASHS--LWIPILFEG 115
+P+EI ++ +VAN VNLIG VD PVQF+ SSDGK WAGTVI Q +AS S WIPI+FEG
Sbjct: 82 RPNEIAYETEVANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSASDSSGFWIPIIFEG 141
Query: 116 DLAHIASSHLKKDDHVHIAGQLTAD--PPAIE-GQANVQVMVHSLNLIEPTS---QKRMF 169
DLA A+ ++ KDD +H++G+L D PP + QANVQV+V +LN I+P S M
Sbjct: 142 DLAKTAAQNINKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLNFIQPMSPSPSPLMV 201
Query: 170 FVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDF 229
S ++E + + I+ D A SW L++NP++W D+R +K+ GLVKPR+PDF
Sbjct: 202 MSSSEKEESGIKKQPGIAKKDIVIDEASDSWNHLIENPKEWWDHRENKVNGLVKPRHPDF 261
Query: 230 KRKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLD 289
K KD +L LWLN AP+WVL +LEG+ FD P
Sbjct: 262 KSKDSSLSLWLNKAPNWVLPKLEGLKFDVLVP---------------------------- 293
Query: 290 DQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNYSPAW 349
K VK+ K ++ WKDLV+NPDKWWDNR+DK++ K PDFKHKETG+ LWLN SP W
Sbjct: 294 ----KGRVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDFKHKETGEALWLNESPTW 349
Query: 350 VTSQLPPVK 358
V +LPPVK
Sbjct: 350 VLPKLPPVK 358
>gi|26451527|dbj|BAC42861.1| unknown protein [Arabidopsis thaliana]
Length = 371
Score = 280 bits (717), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 154/326 (47%), Positives = 205/326 (62%), Gaps = 48/326 (14%)
Query: 44 ATTKTTTSKDVVWPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAA 103
A+ TT ++ P+P+EI ++ + AN VNLIG VD PVQF+ SSDGK WAGTVI Q +A
Sbjct: 75 ASVTATTENEL--PRPNEIAYESEAANWVNLIGFVDQPVQFEASSDGKFWAGTVISQRSA 132
Query: 104 SHS--LWIPILFEGDLAHIASSHLKKDDHVHIAGQLTAD--PPAIE-GQANVQVMVHSLN 158
S S WIPI+FEGDLA A+ ++ KDD +H++G+L D PP + QANVQV+V +LN
Sbjct: 133 SDSSGFWIPIIFEGDLAKTAARYVSKDDQIHVSGKLFIDSPPPNMTYAQANVQVLVQNLN 192
Query: 159 LIEPTSQKRMFFV----SKKQEAATVDHSVKISSSKKDG--DSALSSWRDLLDNPEQWRD 212
I+P S F+ S+K+E+ + +K+D D A SW L++NP++W D
Sbjct: 193 FIQPMSPSPSPFMVMSSSEKEESGIKKQPAR---AKQDIVIDEASDSWNHLIENPKEWWD 249
Query: 213 YRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNY 272
+R +K+ GLVKPR+PDFK KD + LWLN AP+WVL +LEG+ FD P
Sbjct: 250 HRENKVNGLVKPRHPDFKSKDSSFSLWLNKAPNWVLPKLEGLEFDVLVP----------- 298
Query: 273 VKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDF 332
K+ VK+ K ++ WKDLV+NPDKWWDNR+DK++ K PDF
Sbjct: 299 ---------------------KARVVKQLKGEESWKDLVQNPDKWWDNRIDKRNAKAPDF 337
Query: 333 KHKETGKPLWLNYSPAWVTSQLPPVK 358
KHKETG+ LWLN SP WV +LPPVK
Sbjct: 338 KHKETGEALWLNESPTWVLPKLPPVK 363
>gi|18422482|ref|NP_568639.1| protein OSB3 [Arabidopsis thaliana]
gi|75328911|sp|Q8GWJ4.1|OSB3_ARATH RecName: Full=Protein OSB3, chloroplastic/mitochondrial; AltName:
Full=Organellar single-stranded DNA-binding protein 3;
Flags: Precursor
gi|26452626|dbj|BAC43396.1| unknown protein [Arabidopsis thaliana]
gi|28973013|gb|AAO63831.1| unknown protein [Arabidopsis thaliana]
gi|30102734|gb|AAP21285.1| At5g44785 [Arabidopsis thaliana]
gi|110743279|dbj|BAE99530.1| hypothetical protein [Arabidopsis thaliana]
gi|332007779|gb|AED95162.1| protein OSB3 [Arabidopsis thaliana]
Length = 440
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/362 (40%), Positives = 204/362 (56%), Gaps = 63/362 (17%)
Query: 59 PSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAASHS--LWIPILFEGD 116
P +I ++ +++N +NLIG V+ PVQF SDGK WAGTVI Q + S S WIPI+FEGD
Sbjct: 71 PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130
Query: 117 LAHIASSHLKKDDHVHIAGQLTAD--PPAIE-GQANVQVMVHSLNLIEPTSQKRMFFVSK 173
LA IA H+KK+D +H++G+L D PP + Q+NVQVMV +LN ++ +
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPP 190
Query: 174 KQEAATVDHSVKISSSKKDGDSALS-SWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRK 232
++E ++ S K D S SW+ L++NP++W D+R +K GLVKP +PDFK K
Sbjct: 191 EKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMK 250
Query: 233 DGTLPLWLNSAPDWVLSELEGVVFDKSKPV------------------------LDDQTR 268
G L LWL++APDW L +LE + FD P LD+++
Sbjct: 251 VGGLSLWLSTAPDWALLKLEELKFDVLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRSD 310
Query: 269 KSN---------------YVKKSKGVVFDKSKPV-----------------LDDQTQKSN 296
K+N ++ S V K P+ LD + K N
Sbjct: 311 KTNVKYPDFKHKETGEALWMTNSPIWVLSKLPPLKKNQERPFMSNKVSQLELDVEVPKGN 370
Query: 297 YVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNYSPAWVTSQLPP 356
+K+ K +++WK+LVENP KWWDNRLDK++ KGPDFKHKETG+ LW+ SP W S+LPP
Sbjct: 371 -LKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIGDSPTWALSKLPP 429
Query: 357 VK 358
+K
Sbjct: 430 LK 431
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 200 WRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKS 259
W++L++NP +W D R DK P+ PDFK K+ LW+ +P W LS+L + ++
Sbjct: 380 WKNLVENPSKWWDNRLDKRN----PKGPDFKHKETGEALWIGDSPTWALSKLPPLKKNQE 435
Query: 260 KPVL 263
+PV+
Sbjct: 436 RPVM 439
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 15/79 (18%)
Query: 287 VLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKS----EKGPDFKHKETGKPLW 342
V+D++T S WK L+ENP +W D+R +K + PDFK K G LW
Sbjct: 209 VIDEETSNS-----------WKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLW 257
Query: 343 LNYSPAWVTSQLPPVKSTV 361
L+ +P W +L +K V
Sbjct: 258 LSTAPDWALLKLEELKFDV 276
>gi|21537140|gb|AAM61481.1| unknown [Arabidopsis thaliana]
Length = 440
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/362 (40%), Positives = 203/362 (56%), Gaps = 63/362 (17%)
Query: 59 PSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAASHS--LWIPILFEGD 116
P I ++ +++N +NLIG V+ PVQF SDGK WAGTVI Q + S S WIPI+FEGD
Sbjct: 71 PKTIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130
Query: 117 LAHIASSHLKKDDHVHIAGQLTAD--PPAIE-GQANVQVMVHSLNLIEPTSQKRMFFVSK 173
LA IA H+KK+D +H++G+L D PP + Q+NVQVMV +LN ++ +
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPP 190
Query: 174 KQEAATVDHSVKISSSKKDGDSALS-SWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRK 232
++E ++ S K D S SW+ L++NP++W D+R +K GLVKP +PDFK K
Sbjct: 191 EKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMK 250
Query: 233 DGTLPLWLNSAPDWVLSELEGVVFDKSKPV------------------------LDDQTR 268
G L LWL++APDW L +LE + FD P LD+++
Sbjct: 251 VGGLSLWLSTAPDWALLKLEELKFDVLVPKGNIKLNQLKGEESWKDLVQNPDKWLDNRSD 310
Query: 269 KSN---------------YVKKSKGVVFDKSKPV-----------------LDDQTQKSN 296
K+N ++ S V K P+ LD + K N
Sbjct: 311 KTNVKYPDFKHKETGEALWMTNSPIWVLSKLPPLKKNQERPLMSNKVSQLELDVEVPKGN 370
Query: 297 YVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNYSPAWVTSQLPP 356
+K+ K +++WK+LVENP KWWDNRLDK++ KGPDFKHKETG+ LW+ SP W S+LPP
Sbjct: 371 -LKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIGDSPTWALSKLPP 429
Query: 357 VK 358
+K
Sbjct: 430 LK 431
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 200 WRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKS 259
W++L++NP +W D R DK P+ PDFK K+ LW+ +P W LS+L + ++
Sbjct: 380 WKNLVENPSKWWDNRLDKRN----PKGPDFKHKETGEALWIGDSPTWALSKLPPLKKNQE 435
Query: 260 KPVL 263
+PV+
Sbjct: 436 RPVM 439
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 15/79 (18%)
Query: 287 VLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKS----EKGPDFKHKETGKPLW 342
V+D++T S WK L+ENP +W D+R +K + PDFK K G LW
Sbjct: 209 VIDEETSNS-----------WKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLW 257
Query: 343 LNYSPAWVTSQLPPVKSTV 361
L+ +P W +L +K V
Sbjct: 258 LSTAPDWALLKLEELKFDV 276
>gi|42573577|ref|NP_974885.1| protein OSB3 [Arabidopsis thaliana]
gi|332007778|gb|AED95161.1| protein OSB3 [Arabidopsis thaliana]
Length = 442
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 146/364 (40%), Positives = 204/364 (56%), Gaps = 65/364 (17%)
Query: 59 PSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAASHS--LWIPILFEGD 116
P +I ++ +++N +NLIG V+ PVQF SDGK WAGTVI Q + S S WIPI+FEGD
Sbjct: 71 PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130
Query: 117 LAHIASSHLKKDDHVHIAGQLTAD--PPAIE-GQANVQVMVHSLNLIEPTSQKRMFFVSK 173
LA IA H+KK+D +H++G+L D PP + Q+NVQVMV +LN ++ +
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPP 190
Query: 174 KQEAATVDHSVKISSSKKDGDSALS-SWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRK 232
++E ++ S K D S SW+ L++NP++W D+R +K GLVKP +PDFK K
Sbjct: 191 EKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMK 250
Query: 233 DGTLPLWLNSAPDWVLSELEGVVFDKSKPV--------------------------LDDQ 266
G L LWL++APDW L +LE + FD P LD++
Sbjct: 251 VGGLSLWLSTAPDWALLKLEELKFDVLVPKGNIKLNQLKDIGEESWKDLVQNPDKWLDNR 310
Query: 267 TRKSN---------------YVKKSKGVVFDKSKPV-----------------LDDQTQK 294
+ K+N ++ S V K P+ LD + K
Sbjct: 311 SDKTNVKYPDFKHKETGEALWMTNSPIWVLSKLPPLKKNQERPFMSNKVSQLELDVEVPK 370
Query: 295 SNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNYSPAWVTSQL 354
N +K+ K +++WK+LVENP KWWDNRLDK++ KGPDFKHKETG+ LW+ SP W S+L
Sbjct: 371 GN-LKQLKREEIWKNLVENPSKWWDNRLDKRNPKGPDFKHKETGEALWIGDSPTWALSKL 429
Query: 355 PPVK 358
PP+K
Sbjct: 430 PPLK 433
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 200 WRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKS 259
W++L++NP +W D R DK P+ PDFK K+ LW+ +P W LS+L + ++
Sbjct: 382 WKNLVENPSKWWDNRLDKRN----PKGPDFKHKETGEALWIGDSPTWALSKLPPLKKNQE 437
Query: 260 KPVL 263
+PV+
Sbjct: 438 RPVM 441
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 15/79 (18%)
Query: 287 VLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKS----EKGPDFKHKETGKPLW 342
V+D++T S WK L+ENP +W D+R +K + PDFK K G LW
Sbjct: 209 VIDEETSNS-----------WKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLW 257
Query: 343 LNYSPAWVTSQLPPVKSTV 361
L+ +P W +L +K V
Sbjct: 258 LSTAPDWALLKLEELKFDV 276
>gi|297851580|ref|XP_002893671.1| single-stranded DNA binding protein [Arabidopsis lyrata subsp.
lyrata]
gi|297339513|gb|EFH69930.1| single-stranded DNA binding protein [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 196/386 (50%), Gaps = 68/386 (17%)
Query: 1 MMYSLRRVMAQIGRSQTTVKRIILYSPAHFTRPFSSRAHQFTKATTKTTTSKDVVWPKPS 60
M + R + I S + + + FS+ + T+ WP+P+
Sbjct: 1 MQFLARSLSKSIRPSLNSASKQSWVLSHQYLSTFSAESSSRTRGGGSRAEKSTEEWPRPT 60
Query: 61 EIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQH---------AASHSLWIPI 111
E+P+Q K+ANS++LIG+V PVQF ++ DGK WAGTVI +S + WIP+
Sbjct: 61 EVPYQPKIANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSVSDSSSNFWIPV 120
Query: 112 LFEGDLAHIASSHLKKDDHVHIAGQLTADPPAIEGQANV-----------------QVMV 154
LFEGDLAH A+S+LKK+D VHI GQ+ D I+ AN QVMV
Sbjct: 121 LFEGDLAHTANSYLKKNDRVHITGQILGD--VIQSGANSDQACVQLFKSFHGSFSHQVMV 178
Query: 155 HSLNLIEPTSQKRMFFVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYR 214
L+ IE + + Q + HS + + D + W DL+D P++W DYR
Sbjct: 179 RDLHYIEGSKALPKVMPTVNQNEGVLKHSASVQRGR---DVGTNLWFDLVDKPDEWCDYR 235
Query: 215 SDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVK 274
K G V P++PDFK+KDG+ LWLN AP +LSELE V FD K
Sbjct: 236 ESKQNGSVNPKHPDFKKKDGSQALWLNKAPTEILSELEDVKFDIPK-------------- 281
Query: 275 KSKGVVFDKSKPVLDDQTQKSNYVKKSKV-DDLWKDLVENPDKWWDNRLDKKSEKGPDFK 333
Y K K ++ WKDLVEN +KWWDNRLDK+ K PDFK
Sbjct: 282 ----------------------YAPKPKAGEESWKDLVENMNKWWDNRLDKRHPKAPDFK 319
Query: 334 HKETGKPLWLNYSPAWVTSQLPPVKS 359
HKETG LWL+ SP+WV +LPP KS
Sbjct: 320 HKETGVGLWLSDSPSWVLEKLPPPKS 345
>gi|297791323|ref|XP_002863546.1| hypothetical protein ARALYDRAFT_494502 [Arabidopsis lyrata subsp.
lyrata]
gi|297309381|gb|EFH39805.1| hypothetical protein ARALYDRAFT_494502 [Arabidopsis lyrata subsp.
lyrata]
Length = 441
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 137/306 (44%), Positives = 187/306 (61%), Gaps = 37/306 (12%)
Query: 59 PSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAASHS--LWIPILFEGD 116
P I ++ +++N +NLIG V+ PVQF SDGK WAGTVI Q + S S WIPI+FEGD
Sbjct: 71 PKRIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130
Query: 117 LAHIASSHLKKDDHVHIAGQLTAD--PPAIE-GQANVQVMVHSLNLIEP-TSQKRMFFVS 172
LA IA H+KK+D +H++G+L D PP + Q+NVQVMV +LN ++ TS +
Sbjct: 131 LAQIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSLTKTISPP 190
Query: 173 KKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRK 232
+K+ +T V+ K + +SW+ L++NP++W D+R +K GLVKP +PDFK K
Sbjct: 191 EKEVISTKKRPVRSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMK 250
Query: 233 DGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQT 292
G L LWL++APDW L +L+ + FD P KG +
Sbjct: 251 VGGLSLWLSTAPDWALPKLKELEFDVLVP---------------KGNI------------ 283
Query: 293 QKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNYSPAWVTS 352
K N +K ++ WKDLV+NPDKW DNRLDK + K PDFKHKETG+ LW+ SP WV S
Sbjct: 284 -KLNQLKG---EESWKDLVQNPDKWLDNRLDKTNVKYPDFKHKETGEALWMTNSPIWVLS 339
Query: 353 QLPPVK 358
+LPP+K
Sbjct: 340 KLPPLK 345
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Query: 199 SWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNS-APDWVLSELEGVVFD 257
SW++L++NP +W D R DK P+ PDFK K+ LW+N+ +P W LS+L + +
Sbjct: 379 SWKNLVENPSKWWDNRLDKRN----PKAPDFKHKETGEVLWINNNSPTWALSKLPPLKKN 434
Query: 258 KSKPVL 263
+ +PV+
Sbjct: 435 QERPVM 440
>gi|359806154|ref|NP_001241452.1| uncharacterized protein LOC100788700 [Glycine max]
gi|255635066|gb|ACU17891.1| unknown [Glycine max]
Length = 309
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 154/364 (42%), Positives = 195/364 (53%), Gaps = 79/364 (21%)
Query: 1 MMYSLRRVMAQIGRSQTTVKRIILYSPAHFTRPFSSRAHQFTKATTKTTTSKDVVWPKPS 60
M YS+RRV+ + R++L S A T KP+
Sbjct: 1 MNYSVRRVLP--------MSRVVLRSYATVTA-------------------------KPN 27
Query: 61 EIPFQVKVANSVNLIGHVDAPVQFQTS-SDGKHWAGTVIV-QHAASHSLWIPILFEGDLA 118
+IPFQ K+ANSVNLIGHV +P+QF S +DG WA TVI Q ++ S IP++FEGDLA
Sbjct: 28 DIPFQPKLANSVNLIGHVQSPIQFHVSPNDGYVWASTVITRQDSSDLSFSIPVIFEGDLA 87
Query: 119 HIASSHLKKDDHVHIAGQLTADPPAIE---GQANVQVMVHSLNLIE--PTSQKRMFFVSK 173
H A HL +D +HIAG+LT D P +E Q+N+QVMV +LN ++ P K
Sbjct: 88 HTAKFHLNLNDCIHIAGKLTTDSPQLEHLHPQSNIQVMVQTLNFVQRYPQPNTTTSIDLK 147
Query: 174 KQEAATVDHSVKISSSKKDGDSALSS-WRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRK 232
Q +HS I S+KK+ DS+ S WRDLLDNP QWRD+R K GLVKP++PDFKRK
Sbjct: 148 PQPQPQPEHS--IPSAKKNPDSSSPSPWRDLLDNPMQWRDFRESKRNGLVKPKHPDFKRK 205
Query: 233 DGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQT 292
DG LWL WVL +LE + FD +
Sbjct: 206 DG-YSLWLGKDEKWVLPKLEELQFDVPTAI------------------------------ 234
Query: 293 QKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNYSPAWVTS 352
KK + W DLV+N WWDNRL+K++ K PDFKHKETGK LWL+ S WV
Sbjct: 235 -----SKKGDGGESWNDLVQNYANWWDNRLNKRNAKAPDFKHKETGKGLWLDSSSEWVLE 289
Query: 353 QLPP 356
+LPP
Sbjct: 290 KLPP 293
>gi|2660671|gb|AAC79142.1| hypothetical protein [Arabidopsis thaliana]
Length = 395
Score = 240 bits (613), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 136/306 (44%), Positives = 184/306 (60%), Gaps = 37/306 (12%)
Query: 59 PSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAASHS--LWIPILFEGD 116
P +I ++ +++N +NLIG V+ PVQF SDGK WAGTVI Q + S S WIPI+FEGD
Sbjct: 71 PKKIEYKPEISNWINLIGFVEQPVQFGPCSDGKFWAGTVISQRSGSKSSNFWIPIIFEGD 130
Query: 117 LAHIASSHLKKDDHVHIAGQLTAD--PPAIE-GQANVQVMVHSLNLIEPTSQKRMFFVSK 173
LA IA H+KK+D +H++G+L D PP + Q+NVQVMV +LN ++ +
Sbjct: 131 LAKIAVQHVKKEDRIHVSGKLFIDSPPPNVTYSQSNVQVMVQNLNFVQAATSTTKTISPP 190
Query: 174 KQEAATVDHSVKISSSKKDGDSALS-SWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRK 232
++E ++ S K D S SW+ L++NP++W D+R +K GLVKP +PDFK K
Sbjct: 191 EKEVTSIKKKPARSKKVKVIDEETSNSWKHLIENPKEWLDHRGNKANGLVKPGHPDFKMK 250
Query: 233 DGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQT 292
G L LWL++APDW L +LE + FD P KG +
Sbjct: 251 VGGLSLWLSTAPDWALLKLEELKFDVLVP---------------KGNI------------ 283
Query: 293 QKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNYSPAWVTS 352
K N +K ++ WKDLV+NPDKW DNR DK + K PDFKHKETG+ LW+ SP WV S
Sbjct: 284 -KLNQLKG---EESWKDLVQNPDKWLDNRSDKTNVKYPDFKHKETGEALWMTNSPIWVLS 339
Query: 353 QLPPVK 358
+LPP+K
Sbjct: 340 KLPPLK 345
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 15/79 (18%)
Query: 287 VLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKS----EKGPDFKHKETGKPLW 342
V+D++T S WK L+ENP +W D+R +K + PDFK K G LW
Sbjct: 209 VIDEETSNS-----------WKHLIENPKEWLDHRGNKANGLVKPGHPDFKMKVGGLSLW 257
Query: 343 LNYSPAWVTSQLPPVKSTV 361
L+ +P W +L +K V
Sbjct: 258 LSTAPDWALLKLEELKFDV 276
>gi|18397761|ref|NP_564370.1| protein OSB4 [Arabidopsis thaliana]
gi|75334520|sp|Q9FYJ2.1|OSB4_ARATH RecName: Full=Protein OSB4, chloroplastic; AltName: Full=Organellar
single-stranded DNA-binding protein 4; Flags: Precursor
gi|9755375|gb|AAF98182.1|AC000107_5 F17F8.7 [Arabidopsis thaliana]
gi|332193185|gb|AEE31306.1| protein OSB4 [Arabidopsis thaliana]
Length = 360
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 139/329 (42%), Positives = 184/329 (55%), Gaps = 64/329 (19%)
Query: 56 WPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQH---------AASHS 106
WP+P E+P+Q K+ANS++LIG+V PVQF ++ DGK WAGTVI +S +
Sbjct: 59 WPRPMEVPYQPKIANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSESDSSSN 118
Query: 107 LWIPILFEGDLAHIASSHLKKDDHVHIAGQLTAD---PPAIEGQANVQ------------ 151
WIP+LFEGDLAH A+S+LKK+D VHI GQ+ D A QA+VQ
Sbjct: 119 FWIPVLFEGDLAHTANSYLKKNDRVHITGQILGDVIQSGANSDQAHVQLFKSFHGSFSHQ 178
Query: 152 VMVHSLNLIEPTSQKRMFFVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWR 211
VMV L+ IE + + Q + HS + ++ G + W DL+D P +W
Sbjct: 179 VMVRDLHYIEGSKAMPKVLPTLDQNEGVLKHSASVQRGREFGTNL---WFDLVDKPNEWC 235
Query: 212 DYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSN 271
DYR K G V P++PDFK+KDG+ LWLN+AP +LSEL+ V FD K
Sbjct: 236 DYREMKQNGSVNPKHPDFKKKDGSQALWLNNAPTEILSELKDVKFDIPK----------- 284
Query: 272 YVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKV-DDLWKDLVENPDKWWDNRLDKKSEKGP 330
Y K+ K ++ WKDLV+N +KWWDNR+DK++ K P
Sbjct: 285 -------------------------YAKQPKAGEESWKDLVDNMNKWWDNRVDKRTPKSP 319
Query: 331 DFKHKETGKPLWLNYSPAWVTSQLPPVKS 359
DFKHKETG LWL+ SP+WV +LPP KS
Sbjct: 320 DFKHKETGVGLWLSDSPSWVLEKLPPPKS 348
>gi|21554639|gb|AAM63642.1| unknown [Arabidopsis thaliana]
Length = 360
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 139/329 (42%), Positives = 183/329 (55%), Gaps = 64/329 (19%)
Query: 56 WPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQH---------AASHS 106
WP+P E+P+Q K+ANS++LIG+V PVQF ++ DGK WAGTVI +S +
Sbjct: 59 WPRPMEVPYQPKIANSIDLIGYVHQPVQFDSTLDGKFWAGTVISHEPSSDSKSESDSSSN 118
Query: 107 LWIPILFEGDLAHIASSHLKKDDHVHIAGQLTAD---PPAIEGQANVQ------------ 151
WIP+LFEGDLAH A+S+LKK+D VHI GQ+ D A QA+VQ
Sbjct: 119 FWIPVLFEGDLAHTANSYLKKNDRVHITGQILGDVIQSGANSDQAHVQLFKSFHGSFSHQ 178
Query: 152 VMVHSLNLIEPTSQKRMFFVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWR 211
VMV L+ IE + + Q + HS + ++ G + W DL+D P +W
Sbjct: 179 VMVRDLHYIEGSKAMPKVLPTLDQNEGVLKHSASVQRGREFGTNL---WFDLVDKPNEWC 235
Query: 212 DYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSN 271
DYR K G V P++PDFK KDG+ LWLN+AP +LSEL+ V FD K
Sbjct: 236 DYREMKQNGSVNPKHPDFKMKDGSQALWLNNAPTEILSELKDVKFDIPK----------- 284
Query: 272 YVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKV-DDLWKDLVENPDKWWDNRLDKKSEKGP 330
Y K+ K ++ WKDLV+N +KWWDNR+DK++ K P
Sbjct: 285 -------------------------YAKQPKAGEESWKDLVDNMNKWWDNRVDKRTPKSP 319
Query: 331 DFKHKETGKPLWLNYSPAWVTSQLPPVKS 359
DFKHKETG LWL+ SP+WV +LPP KS
Sbjct: 320 DFKHKETGVGLWLSDSPSWVLEKLPPPKS 348
>gi|60685032|gb|AAX34397.1| mitochondrial SBP40 [Solanum tuberosum]
Length = 387
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 131/338 (38%), Positives = 182/338 (53%), Gaps = 69/338 (20%)
Query: 56 WPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAASHS--LWIPILF 113
WPKPSEIP+Q KVANSVNL+G V PV F+ SSDGK+ A TV+ + + L IP++F
Sbjct: 75 WPKPSEIPYQAKVANSVNLVGFVQTPVHFEASSDGKYCASTVVAHENSDDNSVLMIPVVF 134
Query: 114 EGDLAHIASSHLKKDDHVHIAGQLTADPPAIEG----QANVQVMVHSLNLI--------- 160
GDLAH+ + H+K++D V++ G+ + +P + E Q+ ++ ++N +
Sbjct: 135 AGDLAHVVACHVKENDCVYVYGKFSMEPLSCEFMDEYQSCFHIVAENVNFVQGLKRNVSL 194
Query: 161 -----------------EPTSQKRMFFVSKKQEAATV--DHSVKISSSK-KDGDSALSSW 200
E +Q + V +K + + D SV + SK ++G +
Sbjct: 195 KGNVKSVYPKGKNFVLDENDNQHSDYLVKQKDRLSGLEYDDSVNLGESKSEEGVTGGDDR 254
Query: 201 RDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKSK 260
RDL+ NP+QW D R KL G+VK R+PDFK+KD + LW+ + P WVL LEG+ FD
Sbjct: 255 RDLIKNPKQWWDCRKAKLDGIVKARHPDFKKKDSSTSLWIENTPRWVLEGLEGLEFDA-- 312
Query: 261 PVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDN 320
Y KSK + K D WKDL+ENPDKWWDN
Sbjct: 313 -----------YAPKSKSI---------------------GKDVDSWKDLLENPDKWWDN 340
Query: 321 RLDKKSEKGPDFKHKETGKPLWLNYSPAWVTSQLPPVK 358
R K ++K PDFKHK TG LW+ SP WV SQLPP++
Sbjct: 341 RASKLNQKAPDFKHKNTGIGLWVGSSPDWVLSQLPPLR 378
>gi|57900457|dbj|BAD87869.1| unknown protein [Oryza sativa Japonica Group]
Length = 395
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 127/331 (38%), Positives = 182/331 (54%), Gaps = 43/331 (12%)
Query: 57 PKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQ--HAASHSLWIPILFE 114
P+PS I FQ +VAN+V L+G V APVQ Q DG+ A +V+VQ HA WIPI+F+
Sbjct: 70 PRPSTIAFQPRVANAVRLVGTVGAPVQLQRLPDGRFSAVSVLVQDRHADYPKFWIPIIFQ 129
Query: 115 GDLAHIASSHLKKDDHVHIAGQLTADPPA---IEGQANVQVMVHSLNLIEPTSQKRMFFV 171
DLA +A+SHL++ DH++++GQLT D P ++GQAN+QV+ L+ + + + V
Sbjct: 130 DDLAQVAASHLQEKDHIYVSGQLTGDIPPTKLMDGQANIQVLAQMLSFVGGKAVQADSMV 189
Query: 172 SKKQEAATVDHSVKISSSKK--------------DGDSALSSWRDLLDNPEQWRDYRSDK 217
+++ + + K +KK + D W D++ NP+ W D R K
Sbjct: 190 DEEEGFMQIVEAEKKVETKKFIPKYPPRTVSGYRNKDKLNKLWNDVVANPQDWTDNRPQK 249
Query: 218 LKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFD-------KSKPVLDDQTRKS 270
G + +YPDFK LWL++AP VL +L+ +VF K +P D+ +
Sbjct: 250 KNGSINAKYPDFKNNVSKEALWLDTAPKAVLEKLDDLVFSSDFSAAKKYRPFGGDKGNGT 309
Query: 271 NYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGP 330
N+ KKS Q S+ + K K +LW+DLV+NP KWWDNR DK S K P
Sbjct: 310 NWAKKS----------------QDSSSISKQKQGELWQDLVDNPGKWWDNRSDKPSIKYP 353
Query: 331 DFKHKETGKPLWL-NYSPAWVTSQLPPVKST 360
DFKHKE G PLW+ + +P W LPP K +
Sbjct: 354 DFKHKENGTPLWIGSQTPKWAIDALPPAKPS 384
>gi|326529995|dbj|BAK08277.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 420
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 127/325 (39%), Positives = 184/325 (56%), Gaps = 29/325 (8%)
Query: 57 PKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQ--HAASHSLWIPILFE 114
P+P IPFQ +VAN+V L+G V APVQ Q DG+ A +V+VQ A WIP++F+
Sbjct: 83 PRPPTIPFQPRVANAVRLVGAVGAPVQLQRLPDGRFSAVSVLVQDRRADFPKFWIPVIFQ 142
Query: 115 GDLAHIASSHLKKDDHVHIAGQLTADPPAI---EGQANVQVMVHSLNLIEPTSQKRMFFV 171
DLA IA+SHL+++D V+++GQLT D P +GQAN+QV+ H L+ ++ + + V
Sbjct: 143 DDLAQIAASHLQENDLVYVSGQLTGDVPPFKHTDGQANIQVLAHLLSFVDSKAVETDLMV 202
Query: 172 SKKQ---EAATVDHSVK------------ISSSKKDGDSALSSWRDLLDNPEQWRDYRSD 216
+ + E A + V+ S K D + W D+L NP W D R++
Sbjct: 203 DEDEGFMEIAEAEKKVEQTKPISKYPANTFSGYKAKLDKFRTLWNDVLANPLNWTDNRAE 262
Query: 217 KLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNY---V 273
K G P+YPDFK K LWL SAP V+ +L+G+ F T + +
Sbjct: 263 KANGSKNPKYPDFKNKTSDEALWLGSAPPHVVEKLDGLTFSSGYNAAKTATTYKPFDSSM 322
Query: 274 KKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFK 333
+ + K KP +Q ++ K+ K + W++LVE+P WWDNR+DK+S K PDFK
Sbjct: 323 GRGMNTGWSKFKP-----SQAASPEKQKKEAESWQNLVESPQSWWDNRVDKRSPKAPDFK 377
Query: 334 HKETGKPLWLN-YSPAWVTSQLPPV 357
HK+TG+ LWL+ +P+WVT LPPV
Sbjct: 378 HKDTGEALWLSPRTPSWVTDALPPV 402
>gi|326506616|dbj|BAJ91349.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 420
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 126/325 (38%), Positives = 183/325 (56%), Gaps = 29/325 (8%)
Query: 57 PKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQ--HAASHSLWIPILFE 114
P+P IPFQ +VAN+V L+G V APVQ Q DG+ A +V+VQ A WIP++F+
Sbjct: 83 PRPPTIPFQPRVANAVRLVGAVGAPVQLQRLPDGRFSAVSVLVQDRRADFPKFWIPVIFQ 142
Query: 115 GDLAHIASSHLKKDDHVHIAGQLTADPPAI---EGQANVQVMVHSLNLIEPTSQKRMFFV 171
DLA IA+SHL+++D V+++GQLT D P +GQAN+QV+ H L+ ++ + + V
Sbjct: 143 DDLAQIAASHLQENDLVYVSGQLTGDVPPFKHTDGQANIQVLAHLLSFVDSKAVETDLMV 202
Query: 172 SKKQ---EAATVDHSVK------------ISSSKKDGDSALSSWRDLLDNPEQWRDYRSD 216
+ + E A + V+ S K D + W D+L NP W D R++
Sbjct: 203 DEDEGFMEIAEAEKKVEQTKPISKYPANTFSGYKAKLDKFRTLWNDVLANPLNWTDNRAE 262
Query: 217 KLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNY---V 273
K G P+YPDFK K LWL SAP V+ +L+G+ F T + +
Sbjct: 263 KANGSKNPKYPDFKNKTSDEALWLGSAPPHVVEKLDGLTFSSGYNAAKTATTYKPFDSSM 322
Query: 274 KKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFK 333
+ + K KP +Q ++ K+ K + W++LVE+P WWDNR+DK+S K DFK
Sbjct: 323 GRGMNTGWSKFKP-----SQAASPEKQKKEAESWQNLVESPQSWWDNRVDKRSPKATDFK 377
Query: 334 HKETGKPLWLN-YSPAWVTSQLPPV 357
HK+TG+ LWL+ +P+WVT LPPV
Sbjct: 378 HKDTGEALWLSPRTPSWVTDALPPV 402
>gi|357126782|ref|XP_003565066.1| PREDICTED: protein OSB3, chloroplastic/mitochondrial-like
[Brachypodium distachyon]
Length = 414
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 123/323 (38%), Positives = 178/323 (55%), Gaps = 26/323 (8%)
Query: 57 PKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAASH--SLWIPILFE 114
PKP IPFQ +VAN+V L+G V APVQ Q DG+ A +V+VQ + WIP++F+
Sbjct: 83 PKPPTIPFQPRVANAVRLVGTVGAPVQLQQLPDGRFTAVSVLVQDRRNDFPKFWIPVIFQ 142
Query: 115 GDLAHIASSHLKKDDHVHIAGQLTADPPAI---EGQANVQVMVHSLNLIEPTSQKRMFFV 171
DLA +A+SHL+++D V+++GQL+ D P +GQAN+Q++ L+ ++ ++K F V
Sbjct: 143 DDLAQVAASHLQENDLVYVSGQLSGDVPPFKDTDGQANIQILAQLLSFVDSKAEKTDFLV 202
Query: 172 SKKQ---EAATVDHSVK------------ISSSKKDGDSALSSWRDLLDNPEQWRDYRSD 216
+++ E A + V+ +S K D + W DLL +P W D R +
Sbjct: 203 DEEEGFMEIAEAEKKVEQTIVTRKYPPNTVSGYKGKQDKLNTLWNDLLVSPHDWTDCRDE 262
Query: 217 KLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKS 276
K G K YPDFK + LWLN+AP VL +L+ + F + + K
Sbjct: 263 KKNGSKKANYPDFKNNNSKEGLWLNTAPKSVLEKLDDLAFSRGYSAAKTYKPFDGSMGKG 322
Query: 277 KGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKE 336
++K K Q S+ K K DLW++LV+NP +WWDNR K+S K PDFKHKE
Sbjct: 323 TNSGWNKFK-----TNQASSPEKPKKEADLWQNLVDNPGEWWDNRSAKRSSKSPDFKHKE 377
Query: 337 TGKPLWLNY-SPAWVTSQLPPVK 358
TG+ LWLN +P+W L K
Sbjct: 378 TGEALWLNNKTPSWAMDALTSAK 400
>gi|218189730|gb|EEC72157.1| hypothetical protein OsI_05193 [Oryza sativa Indica Group]
gi|222619870|gb|EEE56002.1| hypothetical protein OsJ_04758 [Oryza sativa Japonica Group]
Length = 421
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 129/357 (36%), Positives = 184/357 (51%), Gaps = 69/357 (19%)
Query: 57 PKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQ--HAASHSLWIPILFE 114
P+PS I FQ +VAN+V L+G V APVQ Q DG+ A +V+VQ HA WIPI+F+
Sbjct: 70 PRPSTIAFQPRVANAVRLVGTVGAPVQLQRLPDGRFSAVSVLVQDRHADYPKFWIPIIFQ 129
Query: 115 GDLAHIASSHLKKDDHVHIAGQLTADPPA---IEGQANVQVMVHSLNLI----------- 160
DLA +A+SHL++ DH++++GQLT D P ++GQAN+QV+ L+ +
Sbjct: 130 DDLAQVAASHLQEKDHIYVSGQLTGDIPPTKLMDGQANIQVLAQMLSFVGGKAVQADSMV 189
Query: 161 -EPTSQKRMFFVSKKQEAA---------TVDHSVKISS-------------------SKK 191
E ++ KK E TV ++ +++ +
Sbjct: 190 DEEEGFMQIVEAEKKVETKKFIPKYPPRTVSGAMGMTNKAISFSHAPLFTCPPVSQYCYR 249
Query: 192 DGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSEL 251
+ D W D++ NP+ W D R K G + +YPDFK LWL++AP VL +L
Sbjct: 250 NKDKLNKLWNDVVANPQDWTDNRPQKKNGSINAKYPDFKNNVSKEALWLDTAPKAVLEKL 309
Query: 252 EGVVFD-------KSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVD 304
+ +VF K +P D+ +N+ KKS Q S+ + K K
Sbjct: 310 DDLVFSSDFSAAKKYRPFGGDKGNGTNWAKKS----------------QDSSSISKQKQG 353
Query: 305 DLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWL-NYSPAWVTSQLPPVKST 360
+LW+DLV+NP KWWDNR DK S K PDFKHKE G PLW+ + +P W LPP K +
Sbjct: 354 ELWQDLVDNPGKWWDNRSDKPSIKYPDFKHKENGTPLWIGSQTPKWAIDALPPAKPS 410
>gi|297735427|emb|CBI17867.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 132/208 (63%), Gaps = 36/208 (17%)
Query: 152 VMVHSLNLIEPTSQKRMFFVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWR 211
VMVH++N + + QK F + +E HS SS KK GDS LS WRDL+ NP+QWR
Sbjct: 26 VMVHTVNFVMESGQK---FAHQNEEKPASKHSGN-SSLKKGGDSGLSLWRDLIMNPKQWR 81
Query: 212 DYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSN 271
D R DKL G VKP++PDFKRKD +PLWL+SAP+WV S+LEG+ FD
Sbjct: 82 DNRQDKLNGSVKPKFPDFKRKDDGVPLWLDSAPEWVSSKLEGLEFD-------------- 127
Query: 272 YVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPD 331
+QT K+ Y+K++ D+ WK+LVENPDKWWDNR K EK PD
Sbjct: 128 ------------------NQTHKTKYLKRNTGDESWKNLVENPDKWWDNRSSKTKEKAPD 169
Query: 332 FKHKETGKPLWLNYSPAWVTSQLPPVKS 359
FKHK+TG+ LWL+ SPAWV S+LPP+K+
Sbjct: 170 FKHKDTGEALWLSSSPAWVLSKLPPIKA 197
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 11/100 (11%)
Query: 170 FVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDF 229
+VS K E D+ + K ++ SW++L++NP++W D RS K K + PDF
Sbjct: 116 WVSSKLEGLEFDNQTHKTKYLKR-NTGDESWKNLVENPDKWWDNRSSK----TKEKAPDF 170
Query: 230 KRKDGTLPLWLNSAPDWVLSEL------EGVVFDKSKPVL 263
K KD LWL+S+P WVLS+L + V F K + +L
Sbjct: 171 KHKDTGEALWLSSSPAWVLSKLPPIKAGKNVTFTKRETLL 210
>gi|297598325|ref|NP_001045397.2| Os01g0949200 [Oryza sativa Japonica Group]
gi|57900456|dbj|BAD87868.1| unknown protein [Oryza sativa Japonica Group]
gi|255674072|dbj|BAF07311.2| Os01g0949200 [Oryza sativa Japonica Group]
Length = 309
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/277 (36%), Positives = 148/277 (53%), Gaps = 41/277 (14%)
Query: 109 IPILFEGDLAHIASSHLKKDDHVHIAGQLTAD-PPA--IEGQANVQVMVHSLNLIEPTSQ 165
IPI+F+ DLA +A+SHL++ DH++++GQLT D PP ++GQAN+QV+ L+ + +
Sbjct: 38 IPIIFQDDLAQVAASHLQEKDHIYVSGQLTGDIPPTKLMDGQANIQVLAQMLSFVGGKAV 97
Query: 166 KRMFFVSKKQEAATVDHSVKISSSKK--------------DGDSALSSWRDLLDNPEQWR 211
+ V +++ + + K +KK + D W D++ NP+ W
Sbjct: 98 QADSMVDEEEGFMQIVEAEKKVETKKFIPKYPPRTVSGYRNKDKLNKLWNDVVANPQDWT 157
Query: 212 DYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFD-------KSKPVLD 264
D R K G + +YPDFK LWL++AP VL +L+ +VF K +P
Sbjct: 158 DNRPQKKNGSINAKYPDFKNNVSKEALWLDTAPKAVLEKLDDLVFSSDFSAAKKYRPFGG 217
Query: 265 DQTRKSNYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDK 324
D+ +N+ KKS Q S+ + K K +LW+DLV+NP KWWDNR DK
Sbjct: 218 DKGNGTNWAKKS----------------QDSSSISKQKQGELWQDLVDNPGKWWDNRSDK 261
Query: 325 KSEKGPDFKHKETGKPLWLN-YSPAWVTSQLPPVKST 360
S K PDFKHKE G PLW+ +P W LPP K +
Sbjct: 262 PSIKYPDFKHKENGTPLWIGSQTPKWAIDALPPAKPS 298
>gi|255577289|ref|XP_002529526.1| hypothetical protein RCOM_1716690 [Ricinus communis]
gi|223531010|gb|EEF32864.1| hypothetical protein RCOM_1716690 [Ricinus communis]
Length = 281
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 114/194 (58%), Gaps = 36/194 (18%)
Query: 170 FVSKKQEAATVDHSVKISSSK----KDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPR 225
++ +K E D + K K+GDS L+SWR+L +P+QW DYRS KL GLV P+
Sbjct: 112 WIQEKLEGMAFDKKTTVEGGKGSMIKNGDSVLNSWRELASDPKQWWDYRSSKLNGLVNPK 171
Query: 226 YPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSK 285
+PDFKRKDG + LWLN AP W+LSELE + FD P
Sbjct: 172 HPDFKRKDGDVALWLNKAPRWILSELEKLEFDVQIP------------------------ 207
Query: 286 PVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNY 345
KS VK+ K D W DLV +P+KWWDNRL+KK+E+ PDFKHKETG LWL+
Sbjct: 208 --------KSKQVKQHKGDANWTDLVGHPNKWWDNRLNKKNERYPDFKHKETGVGLWLSN 259
Query: 346 SPAWVTSQLPPVKS 359
SP WV S+LPP+K
Sbjct: 260 SPTWVLSELPPMKG 273
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 87/193 (45%), Gaps = 39/193 (20%)
Query: 175 QEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDG 234
QE A + I+ K + SW+DLL +P +W D RS + P+ F+RK
Sbjct: 47 QEEANITFVAGIA---KGDEYVEQSWKDLLTSPHEWWDIRSQ----VDNPKGASFERKKN 99
Query: 235 TLPLWLNSA-PDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQTQ 293
L+++ A P W+ +LEG+ FDK V+ KG + VL+
Sbjct: 100 GELLYIDHATPKWIQEKLEGMAFDKK-----------TTVEGGKGSMIKNGDSVLNS--- 145
Query: 294 KSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSE----KGPDFKHKETGKPLWLNYSPAW 349
W++L +P +WWD R K + K PDFK K+ LWLN +P W
Sbjct: 146 -------------WRELASDPKQWWDYRSSKLNGLVNPKHPDFKRKDGDVALWLNKAPRW 192
Query: 350 VTSQLPPVKSTVK 362
+ S+L ++ V+
Sbjct: 193 ILSELEKLEFDVQ 205
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 11/88 (12%)
Query: 176 EAATVDHSVKISSSKK----DGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKR 231
E ++ V+I SK+ GD+ +W DL+ +P +W D R +K RYPDFK
Sbjct: 196 ELEKLEFDVQIPKSKQVKQHKGDA---NWTDLVGHPNKWWDNRLNK----KNERYPDFKH 248
Query: 232 KDGTLPLWLNSAPDWVLSELEGVVFDKS 259
K+ + LWL+++P WVLSEL + DK+
Sbjct: 249 KETGVGLWLSNSPTWVLSELPPMKGDKN 276
>gi|359485032|ref|XP_003633203.1| PREDICTED: protein OSB2, chloroplastic-like [Vitis vinifera]
Length = 137
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 101/154 (65%), Gaps = 32/154 (20%)
Query: 206 NPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDD 265
NP+QWRD R DKL G VKP++PDFKRKD +PLWL+SAP+WV S+LEG+ FD
Sbjct: 2 NPKQWRDNRQDKLNGSVKPKFPDFKRKDDGVPLWLDSAPEWVSSKLEGLEFD-------- 53
Query: 266 QTRKSNYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKK 325
+QT K+ Y+K++ D+ WK+LVENPDKWWDNR K
Sbjct: 54 ------------------------NQTHKTKYLKRNTGDESWKNLVENPDKWWDNRSSKT 89
Query: 326 SEKGPDFKHKETGKPLWLNYSPAWVTSQLPPVKS 359
EK PDFKHK+TG+ LWL+ SPAWV S+LPP+K+
Sbjct: 90 KEKAPDFKHKDTGEALWLSSSPAWVLSKLPPIKA 123
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 11/100 (11%)
Query: 170 FVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDF 229
+VS K E D+ + K ++ SW++L++NP++W D RS K K + PDF
Sbjct: 42 WVSSKLEGLEFDNQTHKTKYLK-RNTGDESWKNLVENPDKWWDNRSSK----TKEKAPDF 96
Query: 230 KRKDGTLPLWLNSAPDWVLSEL------EGVVFDKSKPVL 263
K KD LWL+S+P WVLS+L + V F K + +L
Sbjct: 97 KHKDTGEALWLSSSPAWVLSKLPPIKAGKNVTFTKRETLL 136
>gi|242059899|ref|XP_002459095.1| hypothetical protein SORBIDRAFT_03g045740 [Sorghum bicolor]
gi|241931070|gb|EES04215.1| hypothetical protein SORBIDRAFT_03g045740 [Sorghum bicolor]
Length = 383
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 155/313 (49%), Gaps = 27/313 (8%)
Query: 57 PKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAASH--SLWIPILFE 114
P+P IPFQ +VAN+V+L+G V APV Q DG+ A +V+V + W+PI+F+
Sbjct: 84 PRPPTIPFQPRVANAVHLVGTVCAPVHVQQLPDGRFSAVSVLVHDHGINLPKFWVPIVFK 143
Query: 115 GDLAHIASSHLKKDDHVHIAGQLTADPPAIEGQANVQVMVHSLNLIEPTSQKRMFFVSKK 174
DLA + ++ LK D A++ A + + ++E + + K
Sbjct: 144 DDLAQVLANSLK-----------FVDSKAVQTDAILDEDEGFIEIVEAEKKVEAKRPTSK 192
Query: 175 QEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDG 234
TV S + D W D++ +P+ W D R K GL P+YPDFK K
Sbjct: 193 FPPGTV------SGYRNKADKINKLWNDVISHPQDWIDNRPQKKNGLRSPKYPDFKSKVS 246
Query: 235 TLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRK-SNYVKKSKGVVFDKSKPVLDDQTQ 293
LWL+SAP V +L+ +VF + + N +K + + ++
Sbjct: 247 DEALWLDSAPASVREKLDDLVFGSGCAATGRKDKPFGNDTQKGTSTSWMNHR-----KSP 301
Query: 294 KSNYVKKSKVD-DLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNY-SPAWVT 351
+++ K K++ DLW+DLV+NP WWDNR DK + K PDFK+K +G+ LWL SP W
Sbjct: 302 DASFASKQKLEEDLWRDLVDNPANWWDNRTDKPTPKHPDFKNKNSGQGLWLGTKSPQWAR 361
Query: 352 SQLPPVKSTVKSK 364
LP +K SK
Sbjct: 362 DALPSLKFKGGSK 374
>gi|255577287|ref|XP_002529525.1| hypothetical protein RCOM_1716580 [Ricinus communis]
gi|223531009|gb|EEF32863.1| hypothetical protein RCOM_1716580 [Ricinus communis]
Length = 218
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 94/147 (63%), Gaps = 16/147 (10%)
Query: 46 TKTTTSKDVV-WPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAAS 104
K SK+ WP+P EIPFQ K +NSVNL G+V P+QFQ S D + WA TVI QH S
Sbjct: 42 NKVAVSKESCDWPRPKEIPFQAKASNSVNLTGYVSEPIQFQASPDHRFWAATVISQHHPS 101
Query: 105 HS---LWIPILFEGDLAHIASSHLKKDDHVHIAGQLTADPPAIE---GQANVQVMVHSLN 158
WIP++FEGDLA A+SHLK +DHVHIAG+L+AD P I+ GQA V++MV ++N
Sbjct: 102 SDSPHFWIPVIFEGDLARAAASHLKINDHVHIAGKLSADAPPIDVTHGQAQVRIMVQNIN 161
Query: 159 LIEPT---------SQKRMFFVSKKQE 176
I+ + QK FV ++QE
Sbjct: 162 FIQGSFPIKKSCGHQQKIEDFVPEQQE 188
>gi|357501319|ref|XP_003620948.1| Protein OSB3 [Medicago truncatula]
gi|355495963|gb|AES77166.1| Protein OSB3 [Medicago truncatula]
Length = 491
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 112/204 (54%), Gaps = 35/204 (17%)
Query: 164 SQKRMFFVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVK 223
S K F SK + +S+KK S S+W DLLD+P++W D+R K G V
Sbjct: 242 SPKNADFESKTEGELQPGLKQSTTSAKKYTGSLSSTWGDLLDDPKKWWDFRDSKRNGSVN 301
Query: 224 PRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDK 283
P+YPDFKRKDG + +WL+ A VLS L+ + FD
Sbjct: 302 PKYPDFKRKDGNVSIWLDKASKSVLSRLKELEFD-------------------------- 335
Query: 284 SKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWL 343
+ PV QT K SK D+ W DL++NP KWWDNR+DKK + PDFKHK+TG LWL
Sbjct: 336 TPPVKPKQT------KDSKGDESWNDLLQNPAKWWDNRVDKKYARAPDFKHKDTGVGLWL 389
Query: 344 NYSPAWVTSQLPPVK---STVKSK 364
SP+WV+S+L ++ ++VKSK
Sbjct: 390 RDSPSWVSSRLKELEVESTSVKSK 413
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 170 FVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDF 229
+VS + + V+ + S KD + SW DLL NP +W D R DK P+ PDF
Sbjct: 395 WVSSRLKELEVESTSVKSKQAKDSKGSDESWNDLLQNPAKWWDNRLDK----KNPKGPDF 450
Query: 230 KRKDGTLPLWLNSAPDWV 247
K KD LWL +P WV
Sbjct: 451 KHKDTGEALWLRGSPSWV 468
>gi|297735428|emb|CBI17868.3| unnamed protein product [Vitis vinifera]
Length = 263
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 79/104 (75%), Gaps = 7/104 (6%)
Query: 56 WPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQ--HAASHS--LWIPI 111
WP+PSEIP+Q KV NSVNLIG V APVQFQ SSDGK WA TVI Q AASHS LWIP+
Sbjct: 92 WPRPSEIPWQAKVCNSVNLIGKVHAPVQFQQSSDGKCWAVTVIAQDADAASHSPALWIPL 151
Query: 112 LFEGDLAHIASSHLKKDDHVHIAGQLTADPPAI---EGQANVQV 152
FEGDLA+IA HLK++D V+IAGQL DPP + +G ++ QV
Sbjct: 152 TFEGDLAYIAVCHLKENDCVYIAGQLITDPPPLDLNQGPSSFQV 195
>gi|356500150|ref|XP_003518896.1| PREDICTED: protein OSB2, chloroplastic-like [Glycine max]
Length = 284
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 117/221 (52%), Gaps = 24/221 (10%)
Query: 43 KATTKTTTSKDVVWPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGT-VIVQH 101
K + TT S +PKPSEIP+Q ++ NSVNLIG+V APV+ + GK A T + V+
Sbjct: 48 KCSMTTTPS----YPKPSEIPWQKELCNSVNLIGNVAAPVEIKHLPSGKVVAWTRLCVKK 103
Query: 102 AASHSLWIPILFEGDLAHIASSHLKKDDHVHIAGQLTADPPAIE---GQANVQVMVHSLN 158
+A+ S I + F DLAH+AS HL+K +H++G+L D E Q +V+ LN
Sbjct: 104 SATQSSSISLTFWDDLAHVASQHLQKGYQIHVSGRLIIDTVETEEGKTQTYYKVVAQQLN 163
Query: 159 LIEPTSQKRMFFVSKKQEAATVDHSV-----KISSSKKDGDSALSSWRDLLDNPEQWRDY 213
IE R F + + D ++ K+S++ S + SW NP +W D
Sbjct: 164 FIE-----RNFSSASSSQGQEFDFAMAGGGRKVSNAVNSTGSVVESWNAFFANPGEWWDN 218
Query: 214 RSDKLKGLVKPRYPDFKRKDGTLPLWLNS--APDWVLSELE 252
R++K P+ PDFK KD LW+ +P WV S+LE
Sbjct: 219 RNNKR----NPKAPDFKHKDTGEALWIEGRYSPPWVKSQLE 255
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 295 SNYVKKS-KVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLN--YSPAWVT 351
SN V + V + W NP +WWDNR +K++ K PDFKHK+TG+ LW+ YSP WV
Sbjct: 192 SNAVNSTGSVVESWNAFFANPGEWWDNRNNKRNPKAPDFKHKDTGEALWIEGRYSPPWVK 251
Query: 352 SQLPPVKSTVKS 363
SQL + S + S
Sbjct: 252 SQLEILDSRMGS 263
>gi|356536581|ref|XP_003536815.1| PREDICTED: protein OSB2, chloroplastic-like [Glycine max]
Length = 292
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 109/203 (53%), Gaps = 10/203 (4%)
Query: 56 WPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGT-VIVQHAASHSLWIPILFE 114
+PKPSEIP+Q ++ NSVNLIG+V APV+ + GK A T + V+ +A+ S I + F
Sbjct: 65 YPKPSEIPWQKELCNSVNLIGNVAAPVEIKYLPSGKVVAWTRLYVKKSATQSSPINLTFW 124
Query: 115 GDLAHIASSHLKKDDHVHIAGQLTADPPAIE---GQANVQVMVHSLNLIEPTSQKRMFFV 171
DLAH+AS HL+K +H++G+L D E Q +V+V LN IE
Sbjct: 125 DDLAHVASQHLQKGHQIHVSGRLITDTVETEEGKSQTYYKVVVQQLNFIERNFSSVSSSQ 184
Query: 172 SKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKR 231
++ + A K+S++ S + +W NP +W D R++K P+ PDFK
Sbjct: 185 GQEFDFAMAGSGRKVSNAANSTGSVVETWNAFFANPGEWWDNRNNKR----NPKAPDFKH 240
Query: 232 KDGTLPLWLNS--APDWVLSELE 252
KD LW+ P WV S+LE
Sbjct: 241 KDTGEALWIEGRYNPPWVKSQLE 263
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
Query: 263 LDDQTRKSNYVKKSKGVVFDKSKPVLDDQTQKSNYVKKS-KVDDLWKDLVENPDKWWDNR 321
L+ R + V S+G FD + + + SN + V + W NP +WWDNR
Sbjct: 170 LNFIERNFSSVSSSQGQEFDFA--MAGSGRKVSNAANSTGSVVETWNAFFANPGEWWDNR 227
Query: 322 LDKKSEKGPDFKHKETGKPLWLN--YSPAWVTSQLPPVKSTVKS 363
+K++ K PDFKHK+TG+ LW+ Y+P WV SQL + S + S
Sbjct: 228 NNKRNPKAPDFKHKDTGEALWIEGRYNPPWVKSQLEILDSRMGS 271
>gi|297735490|emb|CBI17930.3| unnamed protein product [Vitis vinifera]
Length = 286
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 120/231 (51%), Gaps = 36/231 (15%)
Query: 51 SKDVVWPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGT-VIVQHAASHSLWI 109
++ V +P+PSE+P++ ++ NSV+LIG V APV+ + S GK A T + V+ +AS + WI
Sbjct: 60 NQAVSYPRPSEVPWKKELCNSVSLIGIVGAPVEIKHLSSGKVLAWTRLAVRKSASDTTWI 119
Query: 110 PILFEGDLAHIASSHLKKDDHVHIAGQLTADPPAIEG-----QANVQVMVHSLNLIEPTS 164
+ F +LAH+AS H++K ++++G+L +D +E Q +V+V LN +E
Sbjct: 120 NLTFWDELAHVASQHVEKGQQIYVSGRLVSD--TVENDEGKQQTYYKVVVQQLNFVE--- 174
Query: 165 QKRMFFVSKKQEAATVDHSVKISSSKKDGDSALSS-------WRDLLDNPEQWRDYRSDK 217
R F ++ D S +++ +K G A +S W+ NP W D R K
Sbjct: 175 --RSF--------SSADESNSLAAGRKLGSPATNSTGSIEELWQAFFANPVDWWDNRKTK 224
Query: 218 LKGLVKPRYPDFKRKDGTLPLWLNS--APDWVLSELEGVVFDKSKPVLDDQ 266
P+YPDFK KD LW+ P WV S+L + D DQ
Sbjct: 225 ----KNPKYPDFKHKDTGEALWVEGRYNPSWVKSQL--AILDSRMESFRDQ 269
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 303 VDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLN--YSPAWVTSQLPPVKST 360
+++LW+ NP WWDNR KK+ K PDFKHK+TG+ LW+ Y+P+WV SQL + S
Sbjct: 203 IEELWQAFFANPVDWWDNRKTKKNPKYPDFKHKDTGEALWVEGRYNPSWVKSQLAILDSR 262
Query: 361 VKS 363
++S
Sbjct: 263 MES 265
>gi|449458446|ref|XP_004146958.1| PREDICTED: protein OSB2, chloroplastic-like [Cucumis sativus]
gi|449527159|ref|XP_004170580.1| PREDICTED: protein OSB2, chloroplastic-like [Cucumis sativus]
Length = 294
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 129/262 (49%), Gaps = 28/262 (10%)
Query: 24 LYSPAH--FTRPFSSRAHQFTKATTKTTTSKDVVWPKPSEIPFQVKVANSVNLIGHVDAP 81
L P H F PF A T V +PKPS+IP++ +++NSV LIG V P
Sbjct: 41 LNPPKHLRFPAPFPK-----CSAMENYTNYSAVTYPKPSQIPWKKELSNSVTLIGTVGLP 95
Query: 82 VQFQTSSDGKHWAGT-VIVQHAASHSLWIPILFEGDLAHIASSHLKKDDHVHIAGQLTAD 140
V+ + GK A T + V +++ + WI + F +LAHIAS H++K + ++++G+L AD
Sbjct: 96 VELKHLPSGKDVAWTRLAVWKSSTETSWIGLTFWDELAHIASQHVQKGNQIYVSGRLVAD 155
Query: 141 PPAIEG-----QANVQVMVHSLNLIEPTSQKRMFFVSKKQEAATVDHSVKISSSKKDGDS 195
+E Q +V+V LN IE ++ + Q++ ++ K S D
Sbjct: 156 --LVEADDGKQQTYYKVVVQQLNFIERSNSTAPHY---DQDSNSIMAGRKPGSGAVDNTG 210
Query: 196 ALSS-WRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNS--APDWVLSELE 252
+ W+ NP W D R +K P+YPDFK KD LW+ P WV S+L
Sbjct: 211 STQELWQAFFANPVDWWDNRKNK----KNPKYPDFKHKDTGEALWVEGRYNPPWVKSQL- 265
Query: 253 GVVFDKSKPVLDDQTRK-SNYV 273
+ D LDDQ K +N+V
Sbjct: 266 -ALLDMRMGSLDDQEAKMANFV 286
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 305 DLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLN--YSPAWVTSQL 354
+LW+ NP WWDNR +KK+ K PDFKHK+TG+ LW+ Y+P WV SQL
Sbjct: 214 ELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRYNPPWVKSQL 265
>gi|255636182|gb|ACU18433.1| unknown [Glycine max]
Length = 242
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 98/182 (53%), Gaps = 8/182 (4%)
Query: 56 WPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGT-VIVQHAASHSLWIPILFE 114
+PKPSEIP+Q ++ NSVNLIG+V APV+ + GK A T + V+ +A+ S I + F
Sbjct: 65 YPKPSEIPWQKELCNSVNLIGNVAAPVEIKYLPSGKVVAWTRLYVKKSATQSSPINLTFW 124
Query: 115 GDLAHIASSHLKKDDHVHIAGQLTADPPAIE---GQANVQVMVHSLNLIEPTSQKRMFFV 171
DLAH+AS HL+K +H++G+L D E Q +V+V LN IE
Sbjct: 125 DDLAHVASQHLQKGHQIHVSGRLITDTVETEEGKSQTYYKVVVQQLNFIERNFSSVSSSQ 184
Query: 172 SKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKR 231
++ + A K+S++ S + +W NP +W D R++K P PDFK
Sbjct: 185 GQEFDFAMAGSGRKVSNAANSTGSVVETWNAFFANPGEWWDNRNNKR----NPEAPDFKH 240
Query: 232 KD 233
KD
Sbjct: 241 KD 242
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 303 VDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKE 336
V + W NP +WWDNR +K++ + PDFKHK+
Sbjct: 209 VVETWNAFFANPGEWWDNRNNKRNPEAPDFKHKD 242
>gi|359479595|ref|XP_002275197.2| PREDICTED: protein OSB2, chloroplastic [Vitis vinifera]
Length = 292
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 117/228 (51%), Gaps = 30/228 (13%)
Query: 54 VVWPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGT-VIVQHAASHSLWIPIL 112
V +P+PSE+P++ ++ NSV+LIG V APV+ + S GK A T + V+ +AS + WI +
Sbjct: 63 VSYPRPSEVPWKKELCNSVSLIGIVGAPVEIKHLSSGKVLAWTRLAVRKSASDTTWINLT 122
Query: 113 FEGDLAHIASSHLKKDDHVHIAGQLTADPPAIEG-----QANVQVMVHSLNLIEPTSQKR 167
F +LAH+AS H++K ++++G+L +D +E Q +V+V LN +E R
Sbjct: 123 FWDELAHVASQHVEKGQQIYVSGRLVSD--TVENDEGKQQTYYKVVVQQLNFVE-----R 175
Query: 168 MFFVSKKQEAATVDHSVKISSSKKDGDSALSS-------WRDLLDNPEQWRDYRSDKLKG 220
F S E+ ++ S +K G A +S W+ NP W D R K
Sbjct: 176 SF--SSADESNSLAAGNSTFSGRKLGSPATNSTGSIEELWQAFFANPVDWWDNRKTK--- 230
Query: 221 LVKPRYPDFKRKDGTLPLWLNS--APDWVLSELEGVVFDKSKPVLDDQ 266
P+YPDFK KD LW+ P WV S+L + D DQ
Sbjct: 231 -KNPKYPDFKHKDTGEALWVEGRYNPSWVKSQL--AILDSRMESFRDQ 275
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 303 VDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLN--YSPAWVTSQLPPVKST 360
+++LW+ NP WWDNR KK+ K PDFKHK+TG+ LW+ Y+P+WV SQL + S
Sbjct: 209 IEELWQAFFANPVDWWDNRKTKKNPKYPDFKHKDTGEALWVEGRYNPSWVKSQLAILDSR 268
Query: 361 VKS 363
++S
Sbjct: 269 MES 271
>gi|255559919|ref|XP_002520978.1| single-stranded DNA-binding protein, ssb, putative [Ricinus
communis]
gi|223539815|gb|EEF41395.1| single-stranded DNA-binding protein, ssb, putative [Ricinus
communis]
Length = 285
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 111/222 (50%), Gaps = 23/222 (10%)
Query: 56 WPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGT-VIVQHAASHSLWIPILFE 114
+ KP+EIP++ + NSVNLIG+V APV+ + GK A T + V+ +A+ + WI + F
Sbjct: 59 YAKPTEIPWKKDLCNSVNLIGNVGAPVEIKHLPSGKVVAWTRLAVKRSAAETTWINLTFW 118
Query: 115 GDLAHIASSHLKKDDHVHIAGQLTADPPAIE---GQANVQVMVHSLNLIEPTSQKRMFFV 171
DLA IA H++K +++AG+L +D E Q +V+V LN IE +S
Sbjct: 119 DDLAQIAFQHVEKGHQIYVAGRLVSDVVENEEGKQQTYYKVVVQQLNFIERSS------Y 172
Query: 172 SKKQEAATVDHSV-----KISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRY 226
S D + K ++ G +A W+ NP W D R +K P+Y
Sbjct: 173 SAPSSYRDSDGMIPIPGRKFGNNAASGLNATELWQAFFANPLDWWDNRKNKR----NPKY 228
Query: 227 PDFKRKDGTLPLWLNS--APDWVLSELEGVVFDKSKPVLDDQ 266
PDFK KD LW+ P WV S+L V D+ L DQ
Sbjct: 229 PDFKHKDTGEALWVEGRYNPPWVKSQL--AVLDERMGSLRDQ 268
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 305 DLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLN--YSPAWVTSQL 354
+LW+ NP WWDNR +K++ K PDFKHK+TG+ LW+ Y+P WV SQL
Sbjct: 204 ELWQAFFANPLDWWDNRKNKRNPKYPDFKHKDTGEALWVEGRYNPPWVKSQL 255
>gi|357121000|ref|XP_003562210.1| PREDICTED: protein OSB1, mitochondrial-like [Brachypodium
distachyon]
Length = 308
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 112/233 (48%), Gaps = 28/233 (12%)
Query: 58 KPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWA-GTVIVQHAASHSLWIPILFEGD 116
+P EIP+ ++NSV LIG V V+ + G A G + V +A+ + W+ + F D
Sbjct: 66 RPDEIPWSKDLSNSVRLIGTVGTDVELRQLPSGASVARGRIAVWKSATETTWVTLAFWDD 125
Query: 117 LAHIASSHLKKDDHVHIAGQLTADPPAIEG----QANVQVMVHSLNLIEPTSQKRMFFVS 172
LA +AS H+K+ D + ++G+L +D EG Q +V+V LN IE R++
Sbjct: 126 LAVMASEHVKQGDRIFVSGRLVSD-TVDEGPEKRQVYYKVVVQQLNFIESFQPVRLYESE 184
Query: 173 KKQEAATVDHSVKI-------SSSKKDGDSALSS-------WRDLLDNPEQWRDYRSDKL 218
Q H + S+ K+GD SS W+ NP W D R +K
Sbjct: 185 SNQNTQGGKHGYYVDNDSTSGSTENKNGDFLSSSSRSTEALWQAFFANPLDWWDNRQNK- 243
Query: 219 KGLVKPRYPDFKRKDGTLPLWLN--SAPDWVLSELEGVVFDKSKPVLDDQTRK 269
PRYPDFK K LW++ + P+WV+S+L V D L D+ RK
Sbjct: 244 ---KNPRYPDFKHKSTGEALWVDGRNNPNWVISQL--AVLDSRMGSLQDRERK 291
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 306 LWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLN--YSPAWVTSQLPPVKSTVKS 363
LW+ NP WWDNR +KK+ + PDFKHK TG+ LW++ +P WV SQL + S + S
Sbjct: 225 LWQAFFANPLDWWDNRQNKKNPRYPDFKHKSTGEALWVDGRNNPNWVISQLAVLDSRMGS 284
>gi|326524229|dbj|BAK00498.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 111/230 (48%), Gaps = 25/230 (10%)
Query: 58 KPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWA-GTVIVQHAASHSLWIPILFEGD 116
+P EIP+ ++ NSV LIG V ++ + G A G + V +A+ + W+ + F D
Sbjct: 67 RPDEIPWSRELCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSATETTWVTLAFWDD 126
Query: 117 LAHIASSHLKKDDHVHIAGQLTADPPAIEG----QANVQVMVHSLNLIEPTSQKRMFFVS 172
LA +AS H+K+ D + ++G+L +D EG Q +V+V N IE R++ S
Sbjct: 127 LAVVASEHVKQGDRIFVSGRLVSD-TVDEGPEKRQVYYKVVVQQFNFIESFQPVRLYSES 185
Query: 173 KKQEAATVDH----SVKISSSKKDGDSALSS-------WRDLLDNPEQWRDYRSDKLKGL 221
+ ++ S S+ K GD SS W+ NP W D R DK
Sbjct: 186 GQDGGKYGEYVGNDSTSGSTENKKGDYMSSSSRSTEALWQAFFANPLDWWDNRKDK---- 241
Query: 222 VKPRYPDFKRKDGTLPLWLN--SAPDWVLSELEGVVFDKSKPVLDDQTRK 269
PRYPDFK K LW+ + P+WV+S+L + D L D+ RK
Sbjct: 242 KNPRYPDFKHKSTGEALWVEGRNNPNWVVSQL--AILDSRMGSLQDKQRK 289
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 291 QTQKSNYVKKSK--VDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLN--YS 346
+ +K +Y+ S + LW+ NP WWDNR DKK+ + PDFKHK TG+ LW+ +
Sbjct: 206 ENKKGDYMSSSSRSTEALWQAFFANPLDWWDNRKDKKNPRYPDFKHKSTGEALWVEGRNN 265
Query: 347 PAWVTSQLPPVKSTVKS 363
P WV SQL + S + S
Sbjct: 266 PNWVVSQLAILDSRMGS 282
>gi|326489133|dbj|BAK01550.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 306
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 111/230 (48%), Gaps = 25/230 (10%)
Query: 58 KPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWA-GTVIVQHAASHSLWIPILFEGD 116
+P EIP+ ++ NSV LIG V ++ + G A G + V +A+ + W+ + F D
Sbjct: 67 RPDEIPWSRELCNSVRLIGTVGTDIELRQLPSGASVARGRIAVWKSATETTWVTLAFWDD 126
Query: 117 LAHIASSHLKKDDHVHIAGQLTADPPAIEG----QANVQVMVHSLNLIEPTSQKRMFFVS 172
LA +AS H+K+ D + ++G+L +D EG Q +V+V N IE R++ S
Sbjct: 127 LAVVASEHVKQGDRIFVSGRLVSD-TVDEGPEKRQVYYKVVVQQFNFIESFQPVRLYSES 185
Query: 173 KKQEAATVDH----SVKISSSKKDGDSALSS-------WRDLLDNPEQWRDYRSDKLKGL 221
+ ++ S S+ K GD SS W+ NP W D R DK
Sbjct: 186 GQDGGKYGEYVGNDSTSGSTENKKGDYMSSSSRSTEALWQAFFANPLDWWDNRKDK---- 241
Query: 222 VKPRYPDFKRKDGTLPLWLN--SAPDWVLSELEGVVFDKSKPVLDDQTRK 269
PRYPDFK K LW+ + P+WV+S+L + D L D+ RK
Sbjct: 242 KNPRYPDFKHKSTGEALWVEGRNNPNWVVSQL--AILDSRMGSLQDKQRK 289
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 4/77 (5%)
Query: 291 QTQKSNYVKKSK--VDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLN--YS 346
+ +K +Y+ S + LW+ NP WWDNR DKK+ + PDFKHK TG+ LW+ +
Sbjct: 206 ENKKGDYMSSSSRSTEALWQAFFANPLDWWDNRKDKKNPRYPDFKHKSTGEALWVEGRNN 265
Query: 347 PAWVTSQLPPVKSTVKS 363
P WV SQL + S + S
Sbjct: 266 PNWVVSQLAILDSRMGS 282
>gi|226529435|ref|NP_001150313.1| single-strand binding protein [Zea mays]
gi|195638310|gb|ACG38623.1| single-strand binding protein [Zea mays]
Length = 301
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 119/255 (46%), Gaps = 27/255 (10%)
Query: 33 PFSSRAHQFTKATTKTTTSKDVVWPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKH 92
P R K + S P+PSEIP+ + NSV LIG V V+ + G
Sbjct: 39 PQCRRLRCSAKYSEAAAPSASTTTPRPSEIPWSKDICNSVRLIGTVGTDVELRQLPSGSA 98
Query: 93 WA-GTVIVQHAASHSLWIPILFEGDLAHIASSHLKKDDHVHIAGQLTADPPAIEG----Q 147
A G + V +A+ + W+ + F DLA +AS H+KK D + +AG+L +D EG
Sbjct: 99 VARGRLAVWKSATETTWVTLQFWDDLAIVASEHVKKGDRIFVAGRLVSD-TVDEGPEKRH 157
Query: 148 ANVQVMVHSLNLIEPTSQKRMFFVSKKQEA-----ATVDHSVKISSSKKDGDSALSS--- 199
++ V LN IE + R++ Q+A A + S+ K+ D+ SS
Sbjct: 158 VYYKLAVQQLNFIE-SQPVRLYESDASQDAPGGRRADYFNFTSNSTDDKNRDNMSSSRST 216
Query: 200 ---WRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLN--SAPDWVLSELEGV 254
W+ L NP W D R++K PRYPDFK K LW++ + P+WV S+L
Sbjct: 217 EELWQALFANPLDWWDNRTNK-----NPRYPDFKHKHTGEALWVDGRNNPNWVTSQL--A 269
Query: 255 VFDKSKPVLDDQTRK 269
V D L D RK
Sbjct: 270 VLDSRMSSLQDNERK 284
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 290 DQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLN--YSP 347
D + N ++LW+ L NP WWDNR + K+ + PDFKHK TG+ LW++ +P
Sbjct: 203 DDKNRDNMSSSRSTEELWQALFANPLDWWDNRTN-KNPRYPDFKHKHTGEALWVDGRNNP 261
Query: 348 AWVTSQLPPVKSTVKS 363
WVTSQL + S + S
Sbjct: 262 NWVTSQLAVLDSRMSS 277
>gi|224082730|ref|XP_002306816.1| predicted protein [Populus trichocarpa]
gi|222856265|gb|EEE93812.1| predicted protein [Populus trichocarpa]
Length = 292
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 121/249 (48%), Gaps = 28/249 (11%)
Query: 28 AHFTRPFSS----RAHQFTKATTKTTTSKDVVWPKPSEIPFQVKVANSVNLIGHVDAPVQ 83
+HF R R +Q+++A T KP+EI + ++ NSV+LIG V PV+
Sbjct: 44 SHFQRSLKCSADYRDNQYSQAVTHA---------KPAEIQWNKELCNSVHLIGIVGTPVE 94
Query: 84 FQTSSDGKHWAGT-VIVQHAASHSLWIPILFEGDLAHIASSHLKKDDHVHIAGQLTADP- 141
+ GK A T + V+ +A+ + WI + F DLA ++S H++K ++++G+L D
Sbjct: 95 IKHLPSGKVVAWTRLAVKKSANDTSWINLTFWDDLAQVSSQHVEKGHQIYVSGRLITDSV 154
Query: 142 PAIEG--QANVQVMVHSLNLIEPTSQKRMFFVSKKQEAATVDHSVKISSSKKDGDSALSS 199
EG Q +V+V LN IE +S + ++ AA +++ D S
Sbjct: 155 ENDEGKLQTYYKVVVQQLNFIERSSSRGLYDSDFNNTAAGSKFG---NNTANDMGSMEER 211
Query: 200 WRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNS--APDWVLSELEGVVFD 257
W+ NP +W D R DK P+YPDFK KD LW+ P WV S+L + D
Sbjct: 212 WQAFFANPLEWWDNRKDKR----NPKYPDFKHKDTGEALWVEGRYNPPWVKSQL--AILD 265
Query: 258 KSKPVLDDQ 266
L DQ
Sbjct: 266 GQMGSLQDQ 274
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 303 VDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLN--YSPAWVTSQLPPVKST 360
+++ W+ NP +WWDNR DK++ K PDFKHK+TG+ LW+ Y+P WV SQL +
Sbjct: 208 MEERWQAFFANPLEWWDNRKDKRNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLAILDGQ 267
Query: 361 VKS 363
+ S
Sbjct: 268 MGS 270
>gi|194706792|gb|ACF87480.1| unknown [Zea mays]
gi|413933637|gb|AFW68188.1| single-strand binding protein [Zea mays]
Length = 300
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 133/265 (50%), Gaps = 30/265 (11%)
Query: 40 QFTKATTKTTTSKDVVWPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWA-GTVI 98
Q+++A + T++ +P++IP+ ++ NSV LIG V V+ + G A G +
Sbjct: 47 QYSEAAAQPTSTTTA---RPADIPWSKELCNSVRLIGTVGTDVELRQLPSGSAVARGRLA 103
Query: 99 VQHAASHSLWIPILFEGDLAHIASSHLKKDDHVHIAGQLTADPPAIEG----QANVQVMV 154
V +A+ + W+ + F DLA +AS H+KK D + ++G+L +D EG ++ V
Sbjct: 104 VWKSATETTWVTLQFWDDLAIVASEHVKKGDRIFVSGRLVSD-TVDEGPEKRHVYYKLAV 162
Query: 155 HSLNLIEPTSQKRMFFVSKKQEA-----ATVDHSVKISSSKKDGDSALSS------WRDL 203
LN IE + R++ Q+A A +S+ S+ K+ D+ SS W+
Sbjct: 163 QQLNFIE-SQPVRLYEPEASQDALGGRRADYFNSISNSTEDKNRDNMSSSRSTEELWQVF 221
Query: 204 LDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLN--SAPDWVLSELEGVVFDKSKP 261
NP W D R++K PRYPDFK K LW++ + P+WV+S+L V D
Sbjct: 222 FANPLDWWDNRTNK----KNPRYPDFKHKQTGEALWVDGRNNPNWVISQL--AVLDSRMS 275
Query: 262 VLDDQTRKS-NYVKKSKGVVFDKSK 285
L D RK +Y+ + + D ++
Sbjct: 276 SLQDNERKPVSYMYADEFMTLDGNR 300
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 294 KSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLN--YSPAWVT 351
+ N ++LW+ NP WWDNR +KK+ + PDFKHK+TG+ LW++ +P WV
Sbjct: 205 RDNMSSSRSTEELWQVFFANPLDWWDNRTNKKNPRYPDFKHKQTGEALWVDGRNNPNWVI 264
Query: 352 SQLPPVKSTVKS 363
SQL + S + S
Sbjct: 265 SQLAVLDSRMSS 276
>gi|357440511|ref|XP_003590533.1| Single-stranded DNA-binding protein [Medicago truncatula]
gi|355479581|gb|AES60784.1| Single-stranded DNA-binding protein [Medicago truncatula]
Length = 291
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 113/218 (51%), Gaps = 13/218 (5%)
Query: 43 KATTKTTTSKDVVWPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVI-VQH 101
K + T + +PKP EI + ++NSVNLIG V P++ + GK A T + V+
Sbjct: 50 KCSNSITNNGAASYPKPPEISWNKDLSNSVNLIGFVANPIEIKHLPSGKVVAWTRLSVKK 109
Query: 102 AASHSLWIPILFEGDLAHIASSHLKKDDHVHIAGQLTADP-PAIEG--QANVQVMVHSLN 158
AS WI + F +LAH+AS H++K +H++G+L D +++G Q +V+ LN
Sbjct: 110 NASQMSWIHLTFWDELAHVASQHVQKGHQIHVSGRLVTDTVDSVDGKQQTYYKVVAQQLN 169
Query: 159 LIEPTSQKRMFFVSKKQEAATVDHSVKISSSKKDG--DSALSSWRDLLDNPEQWRDYRSD 216
I+ S + + + T D + K +S +G S + W+ NP +W D R +
Sbjct: 170 FID-RSDSPVRSHDQDFDFITSDDNGKKASYATNGMTGSVVELWQAFFANPGEWWDNRRN 228
Query: 217 KLKGLVKPRYPDFKRKDGTLPLWLN--SAPDWVLSELE 252
K P+ PDFK KD LW++ S P WV S+LE
Sbjct: 229 KR----NPKAPDFKHKDTGEALWIDGRSTPPWVKSQLE 262
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 289 DDQTQKSNYVKKS---KVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLN- 344
DD +K++Y V +LW+ NP +WWDNR +K++ K PDFKHK+TG+ LW++
Sbjct: 191 DDNGKKASYATNGMTGSVVELWQAFFANPGEWWDNRRNKRNPKAPDFKHKDTGEALWIDG 250
Query: 345 -YSPAWVTSQL 354
+P WV SQL
Sbjct: 251 RSTPPWVKSQL 261
>gi|115454229|ref|NP_001050715.1| Os03g0633900 [Oryza sativa Japonica Group]
gi|41469492|gb|AAS07277.1| putative single-strand binding protein [Oryza sativa Japonica
Group]
gi|108709977|gb|ABF97772.1| single-strand binding protein, expressed [Oryza sativa Japonica
Group]
gi|113549186|dbj|BAF12629.1| Os03g0633900 [Oryza sativa Japonica Group]
gi|125587206|gb|EAZ27870.1| hypothetical protein OsJ_11823 [Oryza sativa Japonica Group]
gi|215686917|dbj|BAG90787.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765214|dbj|BAG86911.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 311
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 111/232 (47%), Gaps = 26/232 (11%)
Query: 57 PKPSEIPFQVKVANSVNLIGHVDAPVQF-QTSSDGKHWAGTVIVQHAASHSLWIPILFEG 115
P+P+EIP+ ++ NSV LIG V V+ Q S G G + + +A+ + W+ + F
Sbjct: 66 PRPTEIPWSRELCNSVRLIGTVGTEVELRQLPSGGSVARGRLAIWKSATETTWVTLAFWD 125
Query: 116 DLAHIASSHLKKDDHVHIAGQLTADPPAIEG----QANVQVMVHSLNLIEPTSQKRMFFV 171
DLA +AS H+KK D + ++G+L +D EG Q +V+V N IE Q +++
Sbjct: 126 DLAVVASEHVKKGDRIFVSGRLVSD-TVDEGPEKRQVYYKVVVQQFNFIESFQQVQLYEP 184
Query: 172 SKKQEAATVDH-----SVKISSSKKDGDSALSS-------WRDLLDNPEQWRDYRSDKLK 219
+ H S SS K D SS W+ NP W D R++K
Sbjct: 185 EAGLDTLGGKHGDYVGSTSGSSEGKSRDHVDSSSRSTEQLWQAFFANPFDWWDNRTNK-- 242
Query: 220 GLVKPRYPDFKRKDGTLPLWLN--SAPDWVLSELEGVVFDKSKPVLDDQTRK 269
PRYPDFK K LW++ + P+WV+S+L + D L RK
Sbjct: 243 --KNPRYPDFKHKHTGEALWVDGRNNPNWVISQL--AILDSRMGSLQGNDRK 290
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 268 RKSNYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSE 327
+ +YV + G KS+ +D ++ + + LW+ NP WWDNR +KK+
Sbjct: 194 KHGDYVGSTSGSSEGKSRDHVDSSSRST--------EQLWQAFFANPFDWWDNRTNKKNP 245
Query: 328 KGPDFKHKETGKPLWLN--YSPAWVTSQLPPVKSTVKS 363
+ PDFKHK TG+ LW++ +P WV SQL + S + S
Sbjct: 246 RYPDFKHKHTGEALWVDGRNNPNWVISQLAILDSRMGS 283
>gi|125544978|gb|EAY91117.1| hypothetical protein OsI_12726 [Oryza sativa Indica Group]
Length = 311
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 111/232 (47%), Gaps = 26/232 (11%)
Query: 57 PKPSEIPFQVKVANSVNLIGHVDAPVQF-QTSSDGKHWAGTVIVQHAASHSLWIPILFEG 115
P+P+EIP+ ++ NSV LIG V V+ Q S G G + + +A+ + W+ + F
Sbjct: 66 PRPTEIPWSRELCNSVRLIGTVGTEVELRQLPSGGSVARGRLAIWKSATETTWVTLAFWD 125
Query: 116 DLAHIASSHLKKDDHVHIAGQLTADPPAIEG----QANVQVMVHSLNLIEPTSQKRMFFV 171
DLA +AS H+KK D + ++G+L +D EG Q +V+V N IE Q +++
Sbjct: 126 DLAVVASEHVKKGDRIFVSGRLVSD-TVDEGPEKRQVYYKVVVQQFNFIESFQQVQLYEP 184
Query: 172 SKKQEAATVDH-----SVKISSSKKDGDSALSS-------WRDLLDNPEQWRDYRSDKLK 219
+ H S SS K D SS W+ NP W D R++K
Sbjct: 185 EAGLDTLGGKHGDYVGSTSGSSEGKSRDHVDSSSRSTEQLWQAFFANPLDWWDNRTNK-- 242
Query: 220 GLVKPRYPDFKRKDGTLPLWLN--SAPDWVLSELEGVVFDKSKPVLDDQTRK 269
PRYPDFK K LW++ + P+WV+S+L + D L RK
Sbjct: 243 --KNPRYPDFKHKHTGEALWVDGRNNPNWVISQL--AILDSRMGSLQGNDRK 290
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Query: 268 RKSNYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSE 327
+ +YV + G KS+ +D ++ + + LW+ NP WWDNR +KK+
Sbjct: 194 KHGDYVGSTSGSSEGKSRDHVDSSSRST--------EQLWQAFFANPLDWWDNRTNKKNP 245
Query: 328 KGPDFKHKETGKPLWLN--YSPAWVTSQLPPVKSTVKS 363
+ PDFKHK TG+ LW++ +P WV SQL + S + S
Sbjct: 246 RYPDFKHKHTGEALWVDGRNNPNWVISQLAILDSRMGS 283
>gi|116783984|gb|ABK23169.1| unknown [Picea sitchensis]
Length = 390
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 115/222 (51%), Gaps = 31/222 (13%)
Query: 58 KPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAASH--SLWIPILFEG 115
+P E+P+Q ++AN+V+ IG + +PVQF+ + GK A T + + S+ ++W ++F
Sbjct: 140 RPQEVPWQKELANTVHFIGTIGSPVQFKHTQSGKALAWTRLAVRSGSNGETMWFTLMFWN 199
Query: 116 DLAHIASSHLKKDDHVHIAGQLTADPPAIEGQA--NVQVMVHSLNLIEPTSQK--RMFFV 171
+LA A+ HLKK+D V+++G L A E +V+ +LN +E TS + + V
Sbjct: 200 ELAETAAQHLKKNDKVYVSGFLALQTTAGENDQPKTYKVIAKTLNFVERTSPEFSQQVVV 259
Query: 172 SKKQEA-ATVDHS--------------VKISSSKK----DGDSALSSWRDLLDNPEQWRD 212
+K + A + S VK SSS K D + S W+ +P +W D
Sbjct: 260 NKNNPSLALYEQSVIHKDTPLQYQKSPVKSSSSGKNTQEDAATIESLWQAFFASPLEWWD 319
Query: 213 YRSDKLKGLVKPRYPDFKRKDGTLPLWLNS--APDWVLSELE 252
R++K PR PDFK KD LW+ S P WV S+L+
Sbjct: 320 NRNNKR----NPRAPDFKHKDTGEALWIGSRYNPLWVKSQLD 357
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 254 VVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVEN 313
VV +K+ P L + + + K + + KS PV + K+ + ++ LW+ +
Sbjct: 257 VVVNKNNPSL--ALYEQSVIHKDTPLQYQKS-PVKSSSSGKNTQEDAATIESLWQAFFAS 313
Query: 314 PDKWWDNRLDKKSEKGPDFKHKETGKPLWLN--YSPAWVTSQLPPVKSTVK 362
P +WWDNR +K++ + PDFKHK+TG+ LW+ Y+P WV SQL + S +K
Sbjct: 314 PLEWWDNRNNKRNPRAPDFKHKDTGEALWIGSRYNPLWVKSQLDVLDSRMK 364
>gi|238013788|gb|ACR37929.1| unknown [Zea mays]
gi|414871826|tpg|DAA50383.1| TPA: single-strand binding protein [Zea mays]
Length = 302
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 119/255 (46%), Gaps = 26/255 (10%)
Query: 33 PFSSRAHQFTKATTKTTTSKDVVWPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKH 92
P R K + S P+PSEIP+ + NSV LIG V V+ + G
Sbjct: 39 PRCRRLRCSAKYSEAAAPSASTTTPRPSEIPWSKDICNSVRLIGTVGTDVELRQLPSGSA 98
Query: 93 WA-GTVIVQHAASHSLWIPILFEGDLAHIASSHLKKDDHVHIAGQLTADPPAIEG----Q 147
A G + V +A+ + W+ + F D+A ++S H+KK D + +AG+L +D EG
Sbjct: 99 VARGRLAVWKSATETTWVTLQFWDDMAIVSSEHVKKGDRIFVAGRLVSD-TVDEGPEKRH 157
Query: 148 ANVQVMVHSLNLIEPTSQKRMFFVSKKQEA-----ATVDHSVKISSSKKDGDSALSS--- 199
++ V LN IE + R++ Q+A A + S+ +K+ D+ SS
Sbjct: 158 VYYKLAVQQLNFIE-SQPVRLYESDASQDAPGGRRADYFNFTSNSTDEKNRDNMSSSRST 216
Query: 200 ---WRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLN--SAPDWVLSELEGV 254
W+ NP W D R++K PRYPDFK K LW++ + P+WV S+L
Sbjct: 217 EELWQAFFANPLDWWDNRTNK----KNPRYPDFKHKHTGEALWVDGRNNPNWVTSQL--A 270
Query: 255 VFDKSKPVLDDQTRK 269
V D L D RK
Sbjct: 271 VLDSRMSSLQDNERK 285
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 290 DQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLN--YSP 347
D+ + N ++LW+ NP WWDNR +KK+ + PDFKHK TG+ LW++ +P
Sbjct: 203 DEKNRDNMSSSRSTEELWQAFFANPLDWWDNRTNKKNPRYPDFKHKHTGEALWVDGRNNP 262
Query: 348 AWVTSQLPPVKSTVKS 363
WVTSQL + S + S
Sbjct: 263 NWVTSQLAVLDSRMSS 278
>gi|226496844|ref|NP_001148836.1| single-strand binding protein [Zea mays]
gi|195622496|gb|ACG33078.1| single-strand binding protein [Zea mays]
Length = 300
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 132/265 (49%), Gaps = 30/265 (11%)
Query: 40 QFTKATTKTTTSKDVVWPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWA-GTVI 98
Q+++A + T++ +P++IP+ ++ NSV LIG V V+ + G A G +
Sbjct: 47 QYSEAAAQPTSTTTA---RPADIPWSKELCNSVRLIGTVGTDVELRQLPSGSAVARGRLA 103
Query: 99 VQHAASHSLWIPILFEGDLAHIASSHLKKDDHVHIAGQLTADPPAIEG----QANVQVMV 154
V +A+ + W+ + F DLA +AS H+KK D + ++G+L +D EG ++ V
Sbjct: 104 VWKSATETTWVTLQFWDDLAIVASEHVKKGDRIFVSGRLVSD-TVDEGPEKRHVYYKLAV 162
Query: 155 HSLNLIEPTSQKRMFFVSKKQEA-----ATVDHSVKISSSKKDGDSALSS------WRDL 203
LN IE + R++ Q+A A +S S+ K+ D+ SS W+
Sbjct: 163 QQLNFIE-SQPVRLYEPEASQDALGGRRADYFNSTSNSTEDKNRDNMSSSRSTEELWQVF 221
Query: 204 LDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLN--SAPDWVLSELEGVVFDKSKP 261
NP W D R++K PRYPDFK K LW++ + P+WV+S+L V D
Sbjct: 222 FANPLDWWDNRTNK----KNPRYPDFKHKQTGEALWVDGRNNPNWVISQL--AVLDSRMS 275
Query: 262 VLDDQTRKS-NYVKKSKGVVFDKSK 285
L D RK +Y+ + + D ++
Sbjct: 276 SLQDNERKPVSYMYADEFMTLDGNR 300
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 268 RKSNYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSE 327
R+++Y + DK++ N ++LW+ NP WWDNR +KK+
Sbjct: 188 RRADYFNSTSNSTEDKNR---------DNMSSSRSTEELWQVFFANPLDWWDNRTNKKNP 238
Query: 328 KGPDFKHKETGKPLWLN--YSPAWVTSQLPPVKSTVKS 363
+ PDFKHK+TG+ LW++ +P WV SQL + S + S
Sbjct: 239 RYPDFKHKQTGEALWVDGRNNPNWVISQLAVLDSRMSS 276
>gi|255538426|ref|XP_002510278.1| conserved hypothetical protein [Ricinus communis]
gi|223550979|gb|EEF52465.1| conserved hypothetical protein [Ricinus communis]
Length = 378
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 142/319 (44%), Gaps = 54/319 (16%)
Query: 58 KPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAAS---HSLWIPILFE 114
+P+ I + ++ NSV+ IG VD P++ + A T I S + + +
Sbjct: 63 RPASIRCKPELYNSVSFIGRVDRPLEIYKTKGDTFGAYTFIEVRNPSDPNRTFRMRVEMW 122
Query: 115 GDLAHIASSHLKKDDHVHIAGQLTA-DPPAIEGQANVQVMVHSLNLIEPT--SQKRMFFV 171
D+A HLK++D ++++G L + + P G V ++ +N+ E +Q
Sbjct: 123 NDVAKTGIQHLKQNDDIYVSGCLGSYEMPDKNGNL---VSIYKVNVKELCYVAQHDQHST 179
Query: 172 SKKQE--AATVDHSVKISSSKK------DGDSA------LSSWRDLLDNPEQWRDYRSDK 217
++K E A V +++ +SKK DG++ L W+ P +W D R K
Sbjct: 180 AQKTESKACQVSDELQLKASKKSEEQSGDGNNMENYKNRLDLWQLFFCKPCEWWDKRKSK 239
Query: 218 LKGLVKPRYPDFKRKDGTLPLWLN-SAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKS 276
P PDFK K LWL P WV L+ +LD + K +++
Sbjct: 240 ----QNPELPDFKHKYNGENLWLRPDDPPWVKRHLQ---------LLDMEIAKQ---RQA 283
Query: 277 KGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKE 336
GV KS ++ S LW+ NP +WWDNR +K + + PDFKHK+
Sbjct: 284 NGV-------------GKSGMMRYSNRHHLWQVFFSNPHEWWDNRKNKTNRRSPDFKHKD 330
Query: 337 TGKPLW-LNYSPAWVTSQL 354
TG+ LW + P WV QL
Sbjct: 331 TGEALWIMRDDPPWVKRQL 349
>gi|356497542|ref|XP_003517619.1| PREDICTED: protein OSB2, chloroplastic-like [Glycine max]
Length = 147
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 89/175 (50%), Gaps = 42/175 (24%)
Query: 153 MVHSLNLIE--PTSQKRMFFVSKKQEAATVDHSVKISSSKKDGDSALSS-WRDLLDNPEQ 209
MV +LN ++ P + K + HS I S+K++ DS+ SS WRDL+DNP
Sbjct: 1 MVQTLNFVQGYPQPNNSISINLKPEPEPEPKHS--IPSAKRNRDSSSSSPWRDLVDNPMH 58
Query: 210 WRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRK 269
WRD+R K GLVKPR+PDFKRKDG LWL+ + VL +L+G+ FD V D ++K
Sbjct: 59 WRDFRESKRNGLVKPRHPDFKRKDGHS-LWLSKDNERVLPKLKGLQFD----VPDSISKK 113
Query: 270 SNYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDK 324
+ W DLV+NPD WWDNRL+K
Sbjct: 114 GG--------------------------------GESWNDLVQNPDNWWDNRLNK 136
>gi|413951327|gb|AFW83976.1| hypothetical protein ZEAMMB73_371709, partial [Zea mays]
Length = 233
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 75/111 (67%), Gaps = 5/111 (4%)
Query: 56 WPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAASHS--LWIPILF 113
P+P +PFQ +VAN+V+L+G + APV Q DG+ A +V+V +S W+PI+F
Sbjct: 80 LPRPPTVPFQPRVANAVHLVGTICAPVHMQRLPDGRFSAVSVLVHDRGINSPKFWVPIVF 139
Query: 114 EGDLAHIASSHLKKDDHVHIAGQLTADPPAI---EGQANVQVMVHSLNLIE 161
+ + A IA+SHLK++D V+++G+LT D P +G+AN+QV+ +SL ++
Sbjct: 140 KDNWAQIAASHLKENDLVYVSGKLTCDGPPFKLADGEANIQVLANSLKFVD 190
>gi|242033625|ref|XP_002464207.1| hypothetical protein SORBIDRAFT_01g014110 [Sorghum bicolor]
gi|241918061|gb|EER91205.1| hypothetical protein SORBIDRAFT_01g014110 [Sorghum bicolor]
Length = 301
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 119/243 (48%), Gaps = 25/243 (10%)
Query: 61 EIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWA-GTVIVQHAASHSLWIPILFEGDLAH 119
EIP+ ++ NSV LIG V V+ + G A G + V +A+ + W+ + F DLA
Sbjct: 66 EIPWSKELCNSVRLIGTVGTEVELRQLPSGSAVARGRLAVWKSATETTWVTLQFWDDLAI 125
Query: 120 IASSHLKKDDHVHIAGQL---TADPPAIEGQANVQVMVHSLNLIEPTSQKRMFFVSKKQE 176
+AS H+KK D + ++G+L T D + ++ V LN IE + R++ Q+
Sbjct: 126 VASEHVKKGDRIFVSGRLVSDTVDEGPEKRHVYYKLAVQQLNFIE-SQPVRLYEPEASQD 184
Query: 177 A-----ATVDHSVKISSSKKDGDSALSS------WRDLLDNPEQWRDYRSDKLKGLVKPR 225
A A +S S+ K+ D+ SS W+ NP W D R++K PR
Sbjct: 185 APGGRRADYFNSTSNSTEDKNRDNMSSSRSTEELWQAFFANPLDWWDNRTNK----KNPR 240
Query: 226 YPDFKRKDGTLPLWLN--SAPDWVLSELEGVVFDKSKPVLDDQTRKS-NYVKKSKGVVFD 282
YPDFK K LW++ + P+WV+S+L V D L D RK +Y+ + + D
Sbjct: 241 YPDFKHKHTGEALWVDGRNNPNWVISQL--AVLDSRMSSLQDNGRKPVSYMYADEFMTLD 298
Query: 283 KSK 285
++
Sbjct: 299 GNR 301
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 268 RKSNYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSE 327
R+++Y + DK++ N ++LW+ NP WWDNR +KK+
Sbjct: 189 RRADYFNSTSNSTEDKNR---------DNMSSSRSTEELWQAFFANPLDWWDNRTNKKNP 239
Query: 328 KGPDFKHKETGKPLWLN--YSPAWVTSQLPPVKSTVKS 363
+ PDFKHK TG+ LW++ +P WV SQL + S + S
Sbjct: 240 RYPDFKHKHTGEALWVDGRNNPNWVISQLAVLDSRMSS 277
>gi|224066309|ref|XP_002302076.1| predicted protein [Populus trichocarpa]
gi|222843802|gb|EEE81349.1| predicted protein [Populus trichocarpa]
Length = 292
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 113/227 (49%), Gaps = 19/227 (8%)
Query: 51 SKDVVWPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGT-VIVQHAASHSLWI 109
S+ V KP+EI + ++ NSV+LIG V PV+ + GK A T + V+ +A+ + WI
Sbjct: 62 SQTVTHAKPAEIQWNKELCNSVHLIGIVGIPVEIKHLPSGKVVAWTRLAVKKSATDTSWI 121
Query: 110 PILFEGDLAHIASSHLKKDDHVHIAGQLTADPPAIEG-----QANVQVMVHSLNLIEPTS 164
+ F +LA + S H++K ++++G+L +D ++E Q +V+V LN IE +S
Sbjct: 122 NLTFWDELAQVVSQHVEKGQQIYVSGRLISD--SVENDDGKLQTYYKVVVQQLNFIERSS 179
Query: 165 QKRMFFVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKP 224
++ A +++ D S W+ +P +W D R DK P
Sbjct: 180 PTGLYDRGFNNMEAGRKFG---NNTANDMGSTEERWQAFFASPLEWWDNRKDKR----NP 232
Query: 225 RYPDFKRKDGTLPLWLNS--APDWVLSELEGVVFDKSKPVLDDQTRK 269
+YPDFK KD LW+ P WV S+L + D+ L DQ K
Sbjct: 233 KYPDFKHKDTGEALWVEGRYNPSWVKSQL--AILDERMGSLRDQDSK 277
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
Query: 303 VDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLN--YSPAWVTSQL 354
++ W+ +P +WWDNR DK++ K PDFKHK+TG+ LW+ Y+P+WV SQL
Sbjct: 208 TEERWQAFFASPLEWWDNRKDKRNPKYPDFKHKDTGEALWVEGRYNPSWVKSQL 261
>gi|224137350|ref|XP_002327104.1| predicted protein [Populus trichocarpa]
gi|222835419|gb|EEE73854.1| predicted protein [Populus trichocarpa]
Length = 371
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 135/321 (42%), Gaps = 62/321 (19%)
Query: 58 KPSEIPFQVKVANSVNLIGHVD-APVQFQTSSDGKHWAGTVIVQHAASHSLWIPILFE-- 114
+PS + ++ + N V IG VD +PV ++T G + + + W IL E
Sbjct: 62 RPSTVEWKPSLVNLVRFIGTVDRSPVIYKTKGGGFGCYTLLYARDPHDSNRWFRILVETW 121
Query: 115 GDLAHIASSHLKKDDHVHIAGQL--------TADPPA---IEGQANVQVMVH-----SLN 158
++A + H+K +D ++++G L T +P + I + H +
Sbjct: 122 CEMAKMCIQHVKPNDIIYVSGHLESYLSFDRTGNPSSSYKIIANELCYIAQHNQRSDCQS 181
Query: 159 LIEPTSQKRMFFVSKKQEAA---TVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRS 215
L EP S+ + F + A T +S + +KD + L W+ +P +W D R
Sbjct: 182 LEEPESETCLKFKEPESSACQKYTEPYSGAGTGMEKDKNH-LCLWKAFFSSPHEWWDNRK 240
Query: 216 DKLKGLVKPRYPDFKRKDGTLPLWLN-SAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVK 274
K + PDFK K LWL P W+ ++L+ + + + +++ + Y
Sbjct: 241 FKKNS----KLPDFKHKISGDALWLRPDDPLWIKTKLQLLDWKAGEHCEEERHKNHLY-- 294
Query: 275 KSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKH 334
LW+ +P +WWDNR +KK+ PDFKH
Sbjct: 295 -------------------------------LWQVFFASPHEWWDNRKNKKNSASPDFKH 323
Query: 335 KETGKPLWLN-YSPAWVTSQL 354
K+TG+ LWL+ P WV Q+
Sbjct: 324 KDTGEALWLSPNDPPWVKRQI 344
>gi|116778994|gb|ABK21090.1| unknown [Picea sitchensis]
Length = 392
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 4/113 (3%)
Query: 56 WPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAASHS--LWIPILF 113
+P+P E+P+Q +AN V+ IG + PVQF+ + GK A T + S +W ++F
Sbjct: 88 YPRPQEVPWQQMLANRVHFIGTIGQPVQFKHTRSGKASASTRLGVKIGSQGEIMWFTLVF 147
Query: 114 EGDLAHIASSHLKKDDHVHIAGQLTADPPAIEGQ--ANVQVMVHSLNLIEPTS 164
+LA A+ HLK +D V+++G L A E QV+ +LN IE TS
Sbjct: 148 WNELAETAAQHLKINDKVYVSGFLGLQSTAGEDDKLQIYQVIARTLNFIEKTS 200
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 303 VDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWL--NYSPAWVTSQLPPVKST 360
++ LW++ +P +WWDNR +KK+ K PDFKHK+TG+ LW+ +P WV SQL + S
Sbjct: 305 IESLWQEFFSSPLEWWDNRTNKKNLKAPDFKHKDTGEVLWIWNKSTPPWVKSQLAVLDSR 364
Query: 361 VK 362
+K
Sbjct: 365 MK 366
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 184 VKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWL--N 241
VK SSS +D D S W++ +P +W D R++K K L + PDFK KD LW+
Sbjct: 293 VKSSSSSRDADFIESLWQEFFSSPLEWWDNRTNK-KNL---KAPDFKHKDTGEVLWIWNK 348
Query: 242 SAPDWVLSELEGVVFDKSKPVLDD 265
S P WV S+L V D VL++
Sbjct: 349 STPPWVKSQL--AVLDSRMKVLEE 370
>gi|357437947|ref|XP_003589249.1| Protein OSB1 [Medicago truncatula]
gi|355478297|gb|AES59500.1| Protein OSB1 [Medicago truncatula]
Length = 268
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 116/256 (45%), Gaps = 24/256 (9%)
Query: 3 YSLRRVMAQIGRSQTTVKRIILYSPAHFTRPFSSRAHQFTKATTKTTTSKD--VVWPKPS 60
+ R + A+ ++ + + + +S + P S +H F T++ + + + +P+
Sbjct: 6 FIFRSLFAKPIQTPSILHKCFSFSTTN--HPTKSSSHYFDDVVPGTSSVYNHALKFQRPA 63
Query: 61 EIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVI-VQHAASHSLWIPILFEGDLAH 119
I ++ ++ NS + IG V V+ S G T + VQ W+ ++ ++A
Sbjct: 64 TIRWKPRLENSASFIGSVAREVKHVNSKFGDFGVYTTLRVQKPDRSPFWVLLMMWNNVAE 123
Query: 120 IASSHLKKDDHVHIAGQLTADPPAIEGQANV--QVMVHSLNLIEPTSQKRMFFVSKKQEA 177
IA HLK +D + ++G L + +G +++ ++MV LN + + K E
Sbjct: 124 IAYEHLKPNDLICVSGYLDS----FDGNSDLGYKLMVKELNFVARSLGYEDHEKEHKFEG 179
Query: 178 ATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLP 237
A + ++ + L W+ NP +W D R +KL P+ PDFK KD
Sbjct: 180 A--------KAGNQNYGNPLHLWQVFFANPNEWWDQRKNKLN----PKQPDFKHKDTGEA 227
Query: 238 LWLNS-APDWVLSELE 252
LWL+ P WV +L+
Sbjct: 228 LWLSKHNPPWVTKQLK 243
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 306 LWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLN-YSPAWVTSQL 354
LW+ NP++WWD R +K + K PDFKHK+TG+ LWL+ ++P WVT QL
Sbjct: 193 LWQVFFANPNEWWDQRKNKLNPKQPDFKHKDTGEALWLSKHNPPWVTKQL 242
>gi|297852370|ref|XP_002894066.1| organellar single-stranded [Arabidopsis lyrata subsp. lyrata]
gi|297339908|gb|EFH70325.1| organellar single-stranded [Arabidopsis lyrata subsp. lyrata]
Length = 261
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 21/226 (9%)
Query: 55 VWPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQH---AASHSLWIPI 111
++ KP + + NSV+L+G VD P++ + T++ + S I +
Sbjct: 41 LFKKPLSTKLKFNLVNSVSLMGFVDRPIRVMDTGPDNFGVFTMLRVKDPLIPNRSFRISL 100
Query: 112 LFEGDLAHIASSHLKKDDHVHIAGQLTA--DPPAIEGQA---NVQVMVHSLNLIEPTSQK 166
G +A S+LK +DH+ ++G+L + P E + QV V +N + +
Sbjct: 101 TMWGTMARTCISYLKPNDHILVSGRLVSHSKSPRDENSGLDLDYQVRVTEVNYV--AAPP 158
Query: 167 RMFFVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRY 226
+ S+ E + I SK D + W+ NP W D R +K P
Sbjct: 159 NLVLDSQNSEKPVSEAEDGIEESKID---KIYLWQVFFSNPYDWWDNRRNK----KNPMQ 211
Query: 227 PDFKRKDGTLPLWLNS-APDWVLSELEGVVFDKSKPVLDDQ-TRKS 270
PDFK KD LWL+S PDW+ LE +FD+ D++ TR+
Sbjct: 212 PDFKHKDTGEALWLDSDIPDWINRRLE--LFDQRNRCYDEEKTRRG 255
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 12/100 (12%)
Query: 263 LDDQTR--KSNYVKKSKGVVFDK---SKPVLDDQTQKSNYVKKSKVDD--LWKDLVENPD 315
LD Q R + NYV +V D KPV ++ + +++SK+D LW+ NP
Sbjct: 142 LDYQVRVTEVNYVAAPPNLVLDSQNSEKPV----SEAEDGIEESKIDKIYLWQVFFSNPY 197
Query: 316 KWWDNRLDKKSEKGPDFKHKETGKPLWLNYS-PAWVTSQL 354
WWDNR +KK+ PDFKHK+TG+ LWL+ P W+ +L
Sbjct: 198 DWWDNRRNKKNPMQPDFKHKDTGEALWLDSDIPDWINRRL 237
>gi|30694139|ref|NP_175203.2| protein OSB1 [Arabidopsis thaliana]
gi|75337810|sp|Q9SX99.1|OSB1_ARATH RecName: Full=Protein OSB1, mitochondrial; AltName: Full=Organellar
single-stranded DNA-binding protein 1; Flags: Precursor
gi|5668791|gb|AAD46017.1|AC007519_2 F16N3.2 [Arabidopsis thaliana]
gi|26453224|dbj|BAC43686.1| unknown protein [Arabidopsis thaliana]
gi|28950819|gb|AAO63333.1| At1g47720 [Arabidopsis thaliana]
gi|332194083|gb|AEE32204.1| protein OSB1 [Arabidopsis thaliana]
Length = 261
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 105/233 (45%), Gaps = 26/233 (11%)
Query: 55 VWPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQH---AASHSLWIPI 111
++ KP + + NSV+L+G VD +Q + + T++ + S I +
Sbjct: 41 LFKKPLSTKLKFNLVNSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISL 100
Query: 112 LFEGDLAHIASSHLKKDDHVHIAGQLTADPPA---IEGQANV--QVMVHSLNLIE-PTSQ 165
+A +HLK +DH+ ++G+L + + + N+ QV V +N + P S
Sbjct: 101 RMWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYVAAPPSH 160
Query: 166 KRMFFVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPR 225
+SK + T D I SKKD + W+ NP W D R +K P+
Sbjct: 161 VLDSQISKNPKTKTED---DIEESKKD---EIYLWQVFFSNPYDWWDNRRNK----KNPK 210
Query: 226 YPDFKRKDGTLPLWLNS-APDWVLSELEGVVFDKSKPVLDDQT----RKSNYV 273
PDFK KD LWL S PDW+ LE +FD+ D++ R S+Y+
Sbjct: 211 QPDFKHKDTGEALWLCSDLPDWITRRLE--LFDQKNRFYDEEKTRRDRLSDYI 261
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 271 NYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDD--LWKDLVENPDKWWDNRLDKKSEK 328
NYV V D S+ + +T+ + +++SK D+ LW+ NP WWDNR +KK+ K
Sbjct: 152 NYVAAPPSHVLD-SQISKNPKTKTEDDIEESKKDEIYLWQVFFSNPYDWWDNRRNKKNPK 210
Query: 329 GPDFKHKETGKPLWLNYS-PAWVTSQL 354
PDFKHK+TG+ LWL P W+T +L
Sbjct: 211 QPDFKHKDTGEALWLCSDLPDWITRRL 237
>gi|168045969|ref|XP_001775448.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673251|gb|EDQ59777.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 344
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 103/243 (42%), Gaps = 31/243 (12%)
Query: 56 WPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAASHSL-------W 108
+P+PS + + ++AN+V LIG+V ++ + GK A T + + L W
Sbjct: 100 FPRPSSVRWSKEMANTVQLIGNVGRDMEIKYLDTGKVVAKTSLAVQ--KYGLKKDEPPSW 157
Query: 109 IPILFEGDLAHIASSHLKKDDHVHIAGQLTADPPAIEGQ---------ANVQVMVHSLNL 159
+ + F LA IA HLKK D V++ G+LT D G +V + S
Sbjct: 158 LEMEFWDSLAEIAGHHLKKGDQVYVVGKLTVDQFTTNGVVKKTVKVVATDVHFVEGSRAS 217
Query: 160 IEPTSQKRMFFVSKKQEAATVDHSVKISSSKKDGDSALSS-----WRDLLDNPEQWRDYR 214
+Q F S A S S S D +A ++ W + +P QW D R
Sbjct: 218 ATGNAQSGRSFSSPSWTQAPPAPSQSQSRSGADMYAAANAETEKLWNEYFSDPNQWWDNR 277
Query: 215 SDKLKGLVKPRYPDFKRKDGTLPLWLNS--APDWVLSELEGVVFDKSKPVLDDQT--RKS 270
+ K P+ PDFK K LW+ S P WV +LE + K K + R+S
Sbjct: 278 AKK----PSPKTPDFKHKSTNEALWIVSKKTPSWVPGQLEKLEAAKQKFIASGGGMPRQS 333
Query: 271 NYV 273
N +
Sbjct: 334 NSI 336
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 301 SKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWL--NYSPAWVTSQL 354
++ + LW + +P++WWDNR K S K PDFKHK T + LW+ +P+WV QL
Sbjct: 257 AETEKLWNEYFSDPNQWWDNRAKKPSPKTPDFKHKSTNEALWIVSKKTPSWVPGQL 312
>gi|9802592|gb|AAF99794.1|AC012463_11 T2E6.21 [Arabidopsis thaliana]
Length = 272
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 105/238 (44%), Gaps = 25/238 (10%)
Query: 55 VWPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQH---AASHSLWIPI 111
++ KP + + NSV+L+G VD +Q + + T++ + S I +
Sbjct: 41 LFKKPLSTKLKFNLVNSVSLMGFVDRSIQVMNTGPDRFGVFTILRVKDPLNPNRSFRISL 100
Query: 112 LFEGDLAHIASSHLKKDDHVHIAGQLTADPPA---IEGQANV--QVMVHSLNLIE-PTSQ 165
+A +HLK +DH+ ++G+L + + + N+ QV V +N + P S
Sbjct: 101 RMWDAMARTCIAHLKLNDHILVSGRLESYSKSSSDVYSGLNLDYQVKVAEVNYVAAPPSH 160
Query: 166 KRMFFVSKKQEAATVDHSVKISSSKKDG-----DSALSSWRDLLDNPEQWRDYRSDKLKG 220
+SK + T + +SSS D + W+ NP W D R +K
Sbjct: 161 VLDSQISKNPKTKTGYYLFYVSSSLLDDIEESKKDEIYLWQVFFSNPYDWWDNRRNK--- 217
Query: 221 LVKPRYPDFKRKDGTLPLWLNS-APDWVLSELEGVVFDKSKPVLDDQT----RKSNYV 273
P+ PDFK KD LWL S PDW+ LE +FD+ D++ R S+Y+
Sbjct: 218 -KNPKQPDFKHKDTGEALWLCSDLPDWITRRLE--LFDQKNRFYDEEKTRRDRLSDYI 272
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 262 VLDDQTRKSNYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDD--LWKDLVENPDKWWD 319
VLD Q K N K+ +F S +LDD +++SK D+ LW+ NP WWD
Sbjct: 161 VLDSQISK-NPKTKTGYYLFYVSSSLLDD-------IEESKKDEIYLWQVFFSNPYDWWD 212
Query: 320 NRLDKKSEKGPDFKHKETGKPLWLNYS-PAWVTSQL 354
NR +KK+ K PDFKHK+TG+ LWL P W+T +L
Sbjct: 213 NRRNKKNPKQPDFKHKDTGEALWLCSDLPDWITRRL 248
>gi|356553917|ref|XP_003545297.1| PREDICTED: protein OSB1, mitochondrial-like [Glycine max]
Length = 270
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 266 QTRKSNYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKK 325
+ ++ +V +S G + DK ++D N + LW+ NP++WWD R K+
Sbjct: 160 EVKEFEFVAQSSGYLGDKKLESVEDAGMHKNQNRL----HLWQVFFSNPNEWWDQRKSKR 215
Query: 326 SEKGPDFKHKETGKPLWLN-YSPAWVTSQL 354
+ K PDFKHK+TG+ LWL+ Y P WV QL
Sbjct: 216 NPKQPDFKHKDTGEALWLSEYDPPWVKRQL 245
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 36/251 (14%)
Query: 27 PAHFTRPFSSRAHQFTKATTKTTTSKDVV------------WPKPSEIPFQVKVANSVNL 74
P F+ PFS + +F +T + + V + +P I + + N+ +
Sbjct: 15 PLLFSFPFSPQQQRFLFSTHNRHSFDEAVPGCSAVYQHVLKFQRPPTIRWSPHLENTASF 74
Query: 75 IGHVDAPVQFQTSSDGKHWAGTVI----VQHAASHSLWIPILFEGDLAHIASSHLKKDDH 130
IG V S+ GK TV+ + S + ++ ++A +AS HLK +D
Sbjct: 75 IGTVAREPTRVNSTTGKFGVYTVLKVPKSNQSNSSFFRLLLMMRNNVAKLASEHLKSNDL 134
Query: 131 VHIAGQLTA-DPPAIEG--QANVQVMVHSLNLIEPTSQKRMFFVSKKQEAATVDHSVKIS 187
+H+ G L + P G + N ++ V + +Q + KK E SV+ +
Sbjct: 135 IHVLGSLGSFTKPDANGILRLNYKLEVKEFEFV---AQSSGYLGDKKLE------SVEDA 185
Query: 188 SSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSA-PDW 246
K+ + L W+ NP +W D R K P+ PDFK KD LWL+ P W
Sbjct: 186 GMHKN-QNRLHLWQVFFSNPNEWWDQRKSKR----NPKQPDFKHKDTGEALWLSEYDPPW 240
Query: 247 VLSELEGVVFD 257
V +L+ +FD
Sbjct: 241 VKRQLQ--LFD 249
>gi|125587107|gb|EAZ27771.1| hypothetical protein OsJ_11719 [Oryza sativa Japonica Group]
Length = 296
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 18/207 (8%)
Query: 59 PSEIPFQVKVANSVNLIGHVDAPVQ-FQTSSDGKHWAGTVIVQHAASH--------SLWI 109
P +P + NS +LIG +D PV+ SSD + A T + ++ + +
Sbjct: 45 PPVVPRRGLPRNSCSLIGRLDGPVRPCGGSSDERPMAYTFLSVSSSPSSPPSSSPSNFRV 104
Query: 110 PILFEGDLAHIASSHLKKDDHVHIAGQLTAD---PPAIEGQANVQVMVHSLNLIEPTSQK 166
+ +G+LAH++ HLK++D V+++G L + P+ E ++ V LN + +Q+
Sbjct: 105 TLNLQGELAHVSLKHLKQNDLVYVSGLLNSYHKVDPSGEKHTFYKIHVTDLNYVLDQNQR 164
Query: 167 RMFFVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRY 226
+ +++ + + +I + KK D L W+ +P +W D R K Y
Sbjct: 165 PQNDENSSDKSSMLSTTDEILTEKKYIDR-LRLWQVFFASPYEWWDNRQSKPYSY----Y 219
Query: 227 PDFKRKDGTLPLWLNS-APDWVLSELE 252
PDFK KD LWL + P WV +LE
Sbjct: 220 PDFKHKDTGEKLWLRADDPPWVRRQLE 246
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 306 LWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNY-SPAWVTSQL 354
LW+ +P +WWDNR K PDFKHK+TG+ LWL P WV QL
Sbjct: 196 LWQVFFASPYEWWDNRQSKPYSYYPDFKHKDTGEKLWLRADDPPWVRRQL 245
>gi|356553921|ref|XP_003545299.1| PREDICTED: protein OSB1, mitochondrial-like [Glycine max]
Length = 271
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 26/244 (10%)
Query: 25 YSPAHFTRPFSS-RAHQFTKATTKTTTSKDVV--WPKPSEIPFQVKVANSVNLIGHVDAP 81
+SP PFS+ H F +A + V + +P I + + N+ + IG V
Sbjct: 22 FSPQQQRFPFSTHNRHSFDEAVPGCSAVYQHVLKFQRPPTIRWSPHLENTASFIGTVARE 81
Query: 82 VQFQTSSDGKHWAGTVI----VQHAASHSLWIPILFEGDLAHIASSHLKKDDHVHIAGQL 137
S+ GK TV+ + S + ++ ++A +AS HLK +D + + G L
Sbjct: 82 PTRVNSTTGKCGVYTVLKVPKSNQSNSSFFRLLLMMRNNVAKLASEHLKLNDFIQVLGSL 141
Query: 138 TA-DPPAIEG--QANVQVMVHSLNLIEPTSQKRMFFVSKKQEAATVDHSVKISSSKKDGD 194
+ P G + N ++ V + +Q+ + KK E+ D ++ + ++
Sbjct: 142 GSFTKPDANGILRLNYKLEVKEFEFV---AQRSGYLGDKKLESVEADAGMQKNQNR---- 194
Query: 195 SALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSA-PDWVLSELEG 253
L W+ NP +W D R K P+ PDFK KD LWL+ P WV +L+
Sbjct: 195 --LHLWQVFFSNPNEWWDQRKSKRN----PKQPDFKHKDTGEALWLSEYDPPWVKRQLQ- 247
Query: 254 VVFD 257
+FD
Sbjct: 248 -LFD 250
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 266 QTRKSNYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKK 325
+ ++ +V + G + DK L+ + K LW+ NP++WWD R K+
Sbjct: 160 EVKEFEFVAQRSGYLGDKK---LESVEADAGMQKNQNRLHLWQVFFSNPNEWWDQRKSKR 216
Query: 326 SEKGPDFKHKETGKPLWLN-YSPAWVTSQL 354
+ K PDFKHK+TG+ LWL+ Y P WV QL
Sbjct: 217 NPKQPDFKHKDTGEALWLSEYDPPWVKRQL 246
>gi|226508264|ref|NP_001145065.1| uncharacterized protein LOC100278261 [Zea mays]
gi|195650571|gb|ACG44753.1| hypothetical protein [Zea mays]
Length = 110
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 304 DDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNY-SPAWVTSQLPPV 357
+DLW+DLV NP WWDNR DK + K PDFK+K++G+ LW+ SP W LP +
Sbjct: 40 EDLWRDLVNNPANWWDNRSDKPTLKHPDFKNKDSGQALWIGTKSPRWAVDALPSL 94
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 200 WRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNS-APDWVLSELEGVVF 256
WRDL++NP W D RSDK ++PDFK KD LW+ + +P W + L + F
Sbjct: 43 WRDLVNNPANWWDNRSDK----PTLKHPDFKNKDSGQALWIGTKSPRWAVDALPSLNF 96
>gi|125544849|gb|EAY90988.1| hypothetical protein OsI_12598 [Oryza sativa Indica Group]
Length = 296
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 18/207 (8%)
Query: 59 PSEIPFQVKVANSVNLIGHVDAPVQ-FQTSSDGKHWAGTVIVQHAASH--------SLWI 109
P +P + NS +LIG + PV+ SSD + A T + ++ + +
Sbjct: 45 PPVVPRRGLPRNSCSLIGRLGGPVRPCGGSSDERPMAYTFLSVSSSPSSPPSSSPSNFRV 104
Query: 110 PILFEGDLAHIASSHLKKDDHVHIAGQLTAD---PPAIEGQANVQVMVHSLNLIEPTSQK 166
+ +G+LAH++ HLK++D V+++G L + P+ E ++ V LN + +Q+
Sbjct: 105 TLNLQGELAHVSLKHLKQNDLVYVSGLLNSYHKVDPSGEKHTFYKIHVTDLNYVLDQNQR 164
Query: 167 RMFFVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRY 226
+ +++ + + +I + KK D L W+ +P +W D R K Y
Sbjct: 165 PQNDENSSDKSSMLSTTDEILTEKKYIDR-LRLWQVFFASPYEWWDNRQSKPYSY----Y 219
Query: 227 PDFKRKDGTLPLWLNS-APDWVLSELE 252
PDFK KD LWL + P WV +LE
Sbjct: 220 PDFKHKDTGEKLWLRADDPPWVRRQLE 246
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 306 LWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNY-SPAWVTSQL 354
LW+ +P +WWDNR K PDFKHK+TG+ LWL P WV QL
Sbjct: 196 LWQVFFASPYEWWDNRQSKPYSYYPDFKHKDTGEKLWLRADDPPWVRRQL 245
>gi|302768735|ref|XP_002967787.1| hypothetical protein SELMODRAFT_409075 [Selaginella moellendorffii]
gi|300164525|gb|EFJ31134.1| hypothetical protein SELMODRAFT_409075 [Selaginella moellendorffii]
Length = 1477
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 306 LWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNYS--PAWVTSQLPPVKS 359
LW + P++WWDNR K++ + PDFKHKET + LWLN P+W+ SQ+ ++S
Sbjct: 145 LWLEFFAAPNEWWDNRAIKRNARAPDFKHKETREALWLNSQDLPSWIPSQIQALES 200
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 99/248 (39%), Gaps = 43/248 (17%)
Query: 39 HQFTKATTKTTTSKDVVWPKPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVI 98
HQ T S + +P I + +AN+V+LIG + + S G+ G++
Sbjct: 19 HQCRALVAATDLSGG--FQRPETIKWDRDLANNVSLIGFLGKDPAWGYSEQGRIVYGSIK 76
Query: 99 VQHAASHSLWIPILFEGDLAHIASSHLKKDDHVHIAGQLTADPPAIEGQANVQVMVHSLN 158
H+ W + F ++ IA H KK D V + G+L P + +V+V
Sbjct: 77 TPHS-----WFLLDFCDPVSEIAVEHAKKGDWVQVQGELLVPKPG-DKIVTPKVLVKDFK 130
Query: 159 LIEPTSQKRMFFVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKL 218
+E ++ ++ E A + W + P +W D R+ K
Sbjct: 131 FVEKSNDSKI-------ETARL-------------------WLEFFAAPNEWWDNRAIKR 164
Query: 219 KGLVKPRYPDFKRKDGTLPLWLNS--APDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKS 276
R PDFK K+ LWLNS P W+ S+++ + +SK +L + +
Sbjct: 165 NA----RAPDFKHKETREALWLNSQDLPSWIPSQIQAL---ESKGILKSLLESTKLHSRP 217
Query: 277 KGVVFDKS 284
+ FD S
Sbjct: 218 ATIGFDPS 225
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 273 VKKSKGVVFDKSKPVL-----DDQTQKSNYVKKSKVDD---LWKDLVENPDKWWDNRLDK 324
V S V +S P+ D Q + + +S+ D+ LW++ P +WDNR DK
Sbjct: 287 VSGSVSVEMQRSAPIAKIRVRDFQLVEGDVPGRSEQDEHSRLWQNFFAAPHDYWDNRHDK 346
Query: 325 KSEKGPDFKHKETGKPLWLNYS--PAWVTSQ 353
++ K PDF+HK T + LWL+ S P WV +Q
Sbjct: 347 ENSKRPDFRHKSTKEALWLDDSRNPPWVYAQ 377
>gi|302142377|emb|CBI19580.3| unnamed protein product [Vitis vinifera]
Length = 273
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 18/202 (8%)
Query: 58 KPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQ---HAASHSLWIPILFE 114
+P+ I + + NSV+ IG VD P++ + + +G + TV+ A + I +
Sbjct: 58 RPTTIKWCDRFHNSVSFIGSVDRPLERRYTINGDLYVYTVLHVKPFREARRDVRIFLQMW 117
Query: 115 GDLAHIASSHLKKDDHVHIAGQLTADPPAIE-GQANV--QVMVHSLNLIEPTSQKRMFFV 171
+A I+ HLK++D +H++G L A + GQ +V+V LN + Q +
Sbjct: 118 DRMAEISFKHLKQNDLIHVSGHLGFYTKADDNGQLRPYHKVIVKELNYVTQFGQPPTY-- 175
Query: 172 SKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKR 231
KK E + + K S L W+ NP++W D R K KP PDF+
Sbjct: 176 -KKIENLESEGGTGLIKPK----SRLYLWQVFFYNPDEWWDNRKRK----KKPSQPDFEH 226
Query: 232 KDGTLPLWLNSA-PDWVLSELE 252
K LWL+ P WV +L+
Sbjct: 227 KHTGEALWLHKGDPVWVRKQLQ 248
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 306 LWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNYS-PAWVTSQL 354
LW+ NPD+WWDNR KK PDF+HK TG+ LWL+ P WV QL
Sbjct: 198 LWQVFFYNPDEWWDNRKRKKKPSQPDFEHKHTGEALWLHKGDPVWVRKQL 247
>gi|412992142|emb|CCO19855.1| single-strand binding protein [Bathycoccus prasinos]
Length = 412
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 300 KSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNY--SPAWV 350
+S D LW+ + + PD+WWDNR +K++ + PDFKHK+TG+ LWL +P WV
Sbjct: 285 QSPKDALWRSVFDAPDRWWDNRENKRNPRAPDFKHKDTGEGLWLTGRDTPPWV 337
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 88/240 (36%), Gaps = 54/240 (22%)
Query: 59 PSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIV---------------QHAA 103
P+ + + +ANSV LIG+ + + GK I +
Sbjct: 103 PATVEWDSTLANSVTLIGNCGGDPELRVLPSGKMVCEVSIAVSQGRKAQQQQQQNDEEND 162
Query: 104 SHSLWIPILFEGDLAHIASSHLKKDDHVHIAGQLTADP----PAIEGQANVQVMVHSLNL 159
+ W ++ + A + H++K + V + G+LT D + ++ +V+++ +
Sbjct: 163 GKTAWYTVVAWDEEAVRLNEHVRKGNSVCVQGRLTTDTWVCKQTGQNRSKAKVVLNQFSF 222
Query: 160 I----------------EPT---------SQKRMFFVSKKQEAATVDHSVKISSSKKDGD 194
+ EP SQ + ++Q+ + GD
Sbjct: 223 VARGESMVSNNTNGVGYEPMRQQQQQQQFSQGGYEPMQQQQQQQQQQQQQRSPPPPPSGD 282
Query: 195 SALSS----WRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNS--APDWVL 248
S WR + D P++W D R +K PR PDFK KD LWL P WV+
Sbjct: 283 GFQSPKDALWRSVFDAPDRWWDNRENKRN----PRAPDFKHKDTGEGLWLTGRDTPPWVM 338
>gi|308799583|ref|XP_003074572.1| Single-strand binding protein (ISS) [Ostreococcus tauri]
gi|116000743|emb|CAL50423.1| Single-strand binding protein (ISS) [Ostreococcus tauri]
Length = 380
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 306 LWKDLVENPDKWWDNRLDKKSEKG-----PDFKHKETGKPLWLNY--SPAWVTSQL 354
LW+ L E+PD WWDNR ++KS+ G PDFKHKE+G+ LW+ +PAWV L
Sbjct: 254 LWRSLAEDPDTWWDNR-ERKSQPGSNPRQPDFKHKESGEALWIESRDTPAWVLETL 308
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 200 WRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNS--APDWVLSELEG 253
WR L ++P+ W D R K + PR PDFK K+ LW+ S P WVL L G
Sbjct: 255 WRSLAEDPDTWWDNRERKSQPGSNPRQPDFKHKESGEALWIESRDTPAWVLETLGG 310
>gi|305377020|dbj|BAJ15873.1| pentatricopeptide repeat protein [Physcomitrella patens subsp.
patens]
Length = 221
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 289 DDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLN--YS 346
DD + + + +D+LW + P +WWDNR+ K++ + PD KHK TGK LW++ ++
Sbjct: 33 DDPSSRQSEENSQTIDELW-EYFAGPSQWWDNRIHKRNPRSPDLKHKVTGKALWIDGCFT 91
Query: 347 PAWVTSQ 353
P WV Q
Sbjct: 92 PEWVKFQ 98
>gi|255089659|ref|XP_002506751.1| predicted protein [Micromonas sp. RCC299]
gi|226522024|gb|ACO68009.1| predicted protein [Micromonas sp. RCC299]
Length = 431
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 6/57 (10%)
Query: 304 DDLWKDLVENPDKWWDNRLDKKSEKG----PDFKHKETGKPLWLNY--SPAWVTSQL 354
DDLW+++++NPD WWDNR K + G PDFKHK+T PLW+ +P W L
Sbjct: 295 DDLWREVLDNPDAWWDNRERKSAPGGNPRYPDFKHKDTQTPLWIESRDTPRWAIDAL 351
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 200 WRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNS--APDWVLSEL 251
WR++LDNP+ W D R K PRYPDFK KD PLW+ S P W + L
Sbjct: 298 WREVLDNPDAWWDNRERKSAPGGNPRYPDFKHKDTQTPLWIESRDTPRWAIDAL 351
>gi|147795684|emb|CAN72175.1| hypothetical protein VITISV_012535 [Vitis vinifera]
Length = 273
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 306 LWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNYS-PAWVTSQL 354
LW+ NPD+WWDNR KK PDF+HK TG+ LWL+ P WV QL
Sbjct: 198 LWQVFFYNPDEWWDNRKRKKKPSQPDFEHKHTGEALWLHKGDPVWVRKQL 247
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 58 KPSEIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQ---HAASHSLWIPILFE 114
+P+ I + + NSV+ IG VD P++ + + G T + A + I +
Sbjct: 58 RPTTIKWCDRFHNSVSFIGSVDRPLERRYTIXGDLXVYTXLHVKPFREARRDVRIFLQMW 117
Query: 115 GDLAHIASSHLKKDDHVHIAGQLTADPPAIE-GQANV--QVMVHSLNLIEPTSQKRMFFV 171
+A I+ HLK++D +H++G L A + GQ +V+V LN + Q +
Sbjct: 118 DRMAEISFKHLKQNDLIHVSGHLGFYTKADDNGQLRPYHKVIVKELNYVTQFGQPPTY-- 175
Query: 172 SKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKR 231
KK E + + K S L W+ NP++W D R K KP PDF+
Sbjct: 176 -KKIENLESEGGTGLIKPK----SRLXLWQVFFYNPDEWWDNRKRK----KKPSQPDFEH 226
Query: 232 KDGTLPLWLNSA-PDWVLSELE 252
K LWL+ P WV +L+
Sbjct: 227 KHTGEALWLHKGDPVWVRKQLQ 248
>gi|449470037|ref|XP_004152725.1| PREDICTED: protein OSB1, mitochondrial-like [Cucumis sativus]
Length = 263
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 306 LWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNYS-PAWVTSQLPPVKSTVKSK 364
LW+ +P +WWDNR K + GPDF HK TG+ LWL + P W+ QL + + +K K
Sbjct: 187 LWQVFFSSPHEWWDNRNKKSNPNGPDFSHKSTGEALWLRSTDPPWIRKQLELLDTQMKKK 246
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 90/213 (42%), Gaps = 40/213 (18%)
Query: 71 SVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAA---SHSLWIPILFEGDLAHIASSHLKK 127
S N G V+ P++ T + A T++ A+ S S I + E ++A LK
Sbjct: 59 SANFFGTVERPLKVTTRNCRTVRAWTILRAKASPDSSSSFRIFLKLEKEMAESWIERLKP 118
Query: 128 DDHVHIAGQLTADP---PAIEGQANVQVMVHSLNLIEPTSQKRMFFVSKKQEAATVDHSV 184
+D+V++AG L + + + + Q+ V LN I Q SK Q + + H
Sbjct: 119 NDYVNVAGPLESYKKVGKSGKSYLSYQLTVSELNCIAHNDQG-----SKSQNSVGMLH-- 171
Query: 185 KISSSKKDGDSALSSWRDLL-------DNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLP 237
++G SS+R+ L +P +W D R+ K P PDF K
Sbjct: 172 ------EEGHDCRSSYRERLYLWQVFFSSPHEWWDNRNKK----SNPNGPDFSHKSTGEA 221
Query: 238 LWLNSA-PDWVLSELEGVVFDKSKPVLDDQTRK 269
LWL S P W+ +LE +LD Q +K
Sbjct: 222 LWLRSTDPPWIRKQLE---------LLDTQMKK 245
>gi|357115813|ref|XP_003559680.1| PREDICTED: protein OSB1, mitochondrial-like [Brachypodium
distachyon]
Length = 295
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 91/196 (46%), Gaps = 17/196 (8%)
Query: 69 ANSVNLIGHVDAPVQ-FQTSSDGKHWAGTVI-VQHAASHS------LWIPILFEGDLAHI 120
NS +LIG +DAPV+ + S+ A T + V+H++S S + + F GDLA++
Sbjct: 59 CNSCSLIGRLDAPVRPCKGRSEEDPLAYTFLSVRHSSSSSSSRSSDFQVTLNFSGDLANV 118
Query: 121 ASSHLKKDDHVHIAGQLTAD---PPAIEGQANVQVMVHSLNLIEPTSQKRMFFVSKKQEA 177
+LK DD V++ G L++ P E ++ V LN + ++K A
Sbjct: 119 GLKYLKHDDLVYVYGFLSSYHKVSPRGERHIFYKIHVKELNYVLDHNKKSRNSDDSVDPA 178
Query: 178 ATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLP 237
+T ++ K D L W+ +P +W D R K +Y DFK +D
Sbjct: 179 STPSADTQVLEEDKYKDR-LRLWQVFFASPYEWWDNRQSK----PHVKYADFKHRDTREK 233
Query: 238 LWLN-SAPDWVLSELE 252
LWL+ P WV +LE
Sbjct: 234 LWLHPDDPPWVRRQLE 249
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 306 LWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLN-YSPAWVTSQL 354
LW+ +P +WWDNR K K DFKH++T + LWL+ P WV QL
Sbjct: 199 LWQVFFASPYEWWDNRQSKPHVKYADFKHRDTREKLWLHPDDPPWVRRQL 248
>gi|159490399|ref|XP_001703164.1| chloroplast-targeted RNA-binding protein [Chlamydomonas
reinhardtii]
gi|37545634|gb|AAM76787.1| RNA-binding protein RB38 [Chlamydomonas reinhardtii]
gi|37723144|gb|AAP30010.1| 38 kDa RNA-binding protein [Chlamydomonas reinhardtii]
gi|158270704|gb|EDO96540.1| chloroplast-targeted RNA-binding protein [Chlamydomonas
reinhardtii]
Length = 382
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 84/180 (46%), Gaps = 26/180 (14%)
Query: 182 HSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDG-TLPLWL 240
V++ SK+D L++W L NP++W D R+ K P+ PDF RKD + LW+
Sbjct: 31 REVRVMWSKRD--ETLANWEQLRSNPDEWYDNRTRK----TNPKAPDFVRKDDRAVALWI 84
Query: 241 NS--APDWVLSELEGVVFD-KSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQTQKSNY 297
+ P WV E ++ D S+ V Q R S + G +S P Q ++
Sbjct: 85 DGRDVPTWV----EELLHDLDSRQVNRRQQRDSESGDERGGRGERRSGPGGGRQAAEAAN 140
Query: 298 VKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDF-KHKETGKPLWLNYS--PAWVTSQL 354
W+ L NPD+W+DNR K S++ PDF + + LWL+ P WV L
Sbjct: 141 ---------WEALRSNPDEWYDNRNRKTSDRQPDFVRRDDRNSALWLDSRGVPEWVDELL 191
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 72/164 (43%), Gaps = 41/164 (25%)
Query: 197 LSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDF-KRKDGTLPLWLNS--APDWV---LSE 250
L++W L NP +W D RS K R PDF +R D LWL+S AP WV L+E
Sbjct: 230 LANWESLRANPIEWYDNRSRK----TSDRQPDFVRRDDRRAALWLDSRGAPPWVGDLLAE 285
Query: 251 LEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDL 310
L D ++ ++ S P L+ K++ W+ L
Sbjct: 286 L-------------DAAAQARRQQRQAERSAAPSTPELE--------AKRAAEAANWESL 324
Query: 311 VENPDKWWDNRLDKKSEKGPDFKHKET----------GKPLWLN 344
NP+ W+DNR +K++ K PDF+ K+ G P WLN
Sbjct: 325 RANPEAWFDNRNNKQTPKSPDFRKKDDRTQALWVTSYGAPEWLN 368
>gi|297722343|ref|NP_001173535.1| Os03g0611700 [Oryza sativa Japonica Group]
gi|108709798|gb|ABF97593.1| Single-strand binding protein family protein, expressed [Oryza
sativa Japonica Group]
gi|215693302|dbj|BAG88684.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255674699|dbj|BAH92263.1| Os03g0611700 [Oryza sativa Japonica Group]
Length = 141
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 286 PVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNY 345
P LD+ + Y+ + + LW+ +P +WWDNR K PDFKHK+TG+ LWL
Sbjct: 24 PQLDEILTEKKYIDRLR---LWQVFFASPYEWWDNRQSKPYSYYPDFKHKDTGEKLWLRA 80
Query: 346 -SPAWVTSQL 354
P WV QL
Sbjct: 81 DDPPWVRRQL 90
>gi|326527599|dbj|BAK08074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 42/222 (18%)
Query: 69 ANSVNLIGHVDAPVQFQTSS---DGKHWAGTVIV------QHAASHSLWIPILFEGDLAH 119
+NS +LIG ++APV+ +S D K + + + S + + + +GDLA+
Sbjct: 57 SNSCSLIGRLNAPVRLHLNSSEEDPKAYTFLCVTPSSSSSSSSTSSNFQVTLQMKGDLAN 116
Query: 120 IASSHLKKDDHVHIAGQLTADPPAIE-GQANVQVMVHSLNLIEPTSQKRMFFVSKKQEAA 178
+ HLK D VH++G L + E G+ V +H K + +V ++A
Sbjct: 117 VCLKHLKYKDLVHVSGFLNSYHKVSETGELYVYYKIHV---------KELNYVYDPKKAR 167
Query: 179 TVDHSVKISSSKKDGDSALSS---------WRDLLDNPEQWRDYRSDKLKGLVKPRYPDF 229
+ SV +S+ L W+ +P +W D R K PDF
Sbjct: 168 NDNDSVDPASTPSADTQTLEETKCRERLRLWQVFFASPYEWWDNRQYKPYAGC----PDF 223
Query: 230 KRKDGTLPLWLN-SAPDWVLSELEGVVFDKSKPVLDDQTRKS 270
K KD LWL+ P WV+ +L+ ++D QT +S
Sbjct: 224 KHKDTREQLWLHPDDPPWVIKQLK---------LIDQQTAES 256
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 284 SKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWL 343
S P D QT + ++ LW+ +P +WWDNR K PDFKHK+T + LWL
Sbjct: 177 STPSADTQTLEETKCRERL--RLWQVFFASPYEWWDNRQYKPYAGCPDFKHKDTREQLWL 234
Query: 344 N-YSPAWVTSQL 354
+ P WV QL
Sbjct: 235 HPDDPPWVIKQL 246
>gi|293334287|ref|NP_001168932.1| uncharacterized protein LOC100382744 [Zea mays]
gi|223973799|gb|ACN31087.1| unknown [Zea mays]
Length = 249
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 58 KPSEIPFQVKVANSVNLIGHVDAPVQ-FQTSSDGKHWAGTVI-------VQHAASHSLWI 109
+PS + + N +LIG + APV+ F TS A T + ++S ++ +
Sbjct: 6 RPSTVRKKGLTWNCCSLIGRLAAPVRPFDTSFLEVPSAYTFLSVTFSSPATSSSSSNINV 65
Query: 110 PILFEGDLAHIASSHLKKDDHVHIAGQLTAD---PPAIEGQANVQVMVHSLNLIEPTSQK 166
+ G+LA++ HLK DD V+++G L + P+ E ++ V LN + ++K
Sbjct: 66 TLQLTGELANVGLKHLKHDDLVYVSGHLGSYHKVSPSGERHIVYKIYVRELNYVVDQNKK 125
Query: 167 RMFFVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRY 226
+ + ++ + + L W+ NP +W D R K Y
Sbjct: 126 PQNDADSTSPPSMTSVTPQM-LKENECIGRLRLWQVFFANPYEWWDNRQSKTWA----NY 180
Query: 227 PDFKRKDGTLPLWLN-SAPDWVLSELE 252
PDFK KD +WL P WV +LE
Sbjct: 181 PDFKHKDTREKIWLRPDDPPWVRKQLE 207
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 306 LWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLN-YSPAWVTSQL 354
LW+ NP +WWDNR K PDFKHK+T + +WL P WV QL
Sbjct: 157 LWQVFFANPYEWWDNRQSKTWANYPDFKHKDTREKIWLRPDDPPWVRKQL 206
>gi|384248029|gb|EIE21514.1| nucleic acid-binding protein [Coccomyxa subellipsoidea C-169]
Length = 318
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 307 WKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNY--SPAWVTSQLPPVKSTVKSK 364
W D NP +WDNR +K++ K PDFK K+ LWL+ +P WV QL +KS + ++
Sbjct: 253 WADFFANPGGYWDNRFNKRNPKAPDFKAKDGDSALWLDSRDTPPWVPDQL--IKSGLGAR 310
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 86/224 (38%), Gaps = 39/224 (17%)
Query: 61 EIPFQVKVANSVNLIGHVDAPVQFQTSSDGKHWAG-TVIVQHAASHSLWIPILFEGDLAH 119
E+ F ++ NSV ++G++ P + +G A TV V++A + W + LA
Sbjct: 85 EVDFDPRLVNSVGILGNLGQPFDLRRLRNGMSVASSTVAVKNAKKETEWFNLEVWNKLAE 144
Query: 120 IASSHLKKDDHVHIAGQLTADP-PAIEGQA--NVQVMVHSLNLIEPTSQKRMFFVSKKQE 176
A+ K + + G+L + EGQ + +++ +N + P + + S E
Sbjct: 145 QAAEQFSKGSQIQVVGRLKTETWTDREGQTRKSFKIVADQVNRVRPYTMG--YQSSPPPE 202
Query: 177 A-----------ATVDHSVKISSSKKDG----------------DSALSSWRDLLDNPEQ 209
A + G D A W D NP
Sbjct: 203 AWSPAPQQQQQPQPQAPPTPVQDDFAGGSPQPFFGEMPPPGSAMDPASQKWADFFANPGG 262
Query: 210 WRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNS--APDWVLSEL 251
+ D R +K P+ PDFK KDG LWL+S P WV +L
Sbjct: 263 YWDNRFNKRN----PKAPDFKAKDGDSALWLDSRDTPPWVPDQL 302
>gi|302843830|ref|XP_002953456.1| hypothetical protein VOLCADRAFT_82305 [Volvox carteri f.
nagariensis]
gi|300261215|gb|EFJ45429.1| hypothetical protein VOLCADRAFT_82305 [Volvox carteri f.
nagariensis]
Length = 413
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 30/167 (17%)
Query: 194 DSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDG-TLPLWLNS--APDWVLSE 250
D LS+W L NP +W D R K P+ PDF RKD ++ +W++ P W
Sbjct: 38 DEVLSNWDALRANPNEWYDNRKRK----TNPKAPDFVRKDDRSVAIWIDGRDTPGWYEEF 93
Query: 251 LEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQTQKSNYVKKSKVDDLWKDL 310
L+ + S + +G F +P D +++ + W+ L
Sbjct: 94 LDEL--------------DSRQGGQQRGDRFGGDRPGGDRNDRRAAEMAN------WESL 133
Query: 311 VENPDKWWDNRLDKKSEKGPDFKHK-ETGKPLWLNY--SPAWVTSQL 354
NP++W+DNR K + + PDF+ K + LW++ +P W+ L
Sbjct: 134 RNNPEEWFDNRSRKTNPRAPDFRRKDDRAVALWIDSYGAPEWLDDLL 180
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 18/184 (9%)
Query: 195 SALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRK-DGTLPLWLNS--APDWV---L 248
+ ++ W L NPE W D R K P+ PDFK K D ++ LWL+S PD++ L
Sbjct: 216 AEMAKWDSLRSNPELWFDNRRTK----TNPKAPDFKLKSDRSVALWLSSYQLPDYLDDLL 271
Query: 249 SELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQTQK-----SNYVKKSKV 303
+EL+ + ++ +Y + Q S K ++
Sbjct: 272 AELDARYDQRMNGQQQYYQQQQDYQPYPEQQQGYADYQQQQQPQQSYQQSDSREAKIAQE 331
Query: 304 DDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGK-PLWL--NYSPAWVTSQLPPVKST 360
W+ L NP++W+DNR K++ K PDF++K+ LWL +P W+ LP + +
Sbjct: 332 QANWESLRNNPEQWFDNRYTKQNPKAPDFRNKDDRSLVLWLTSRSAPEWINELLPELDAR 391
Query: 361 VKSK 364
+ +
Sbjct: 392 YQQR 395
>gi|159490401|ref|XP_001703165.1| hypothetical protein CHLREDRAFT_154571 [Chlamydomonas reinhardtii]
gi|158270705|gb|EDO96541.1| predicted protein [Chlamydomonas reinhardtii]
Length = 167
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 58/144 (40%), Gaps = 32/144 (22%)
Query: 186 ISSSKKDGDSA---LSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRK-DGTLPLWL- 240
+ S+ + G+ A ++ W DL NP W D R DK G P PDF+ K D +W+
Sbjct: 45 LGSASRGGERAQQVVAFWEDLRANPGDWWDNREDKASGRGNPNIPDFRNKMDRGKAVWIV 104
Query: 241 -NSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQTQKSNYVK 299
AP WV L+ Q + + G Q +
Sbjct: 105 DRCAPAWVREWLQ-------------QHPPGSLASSTAGAA------------QGGTQAQ 139
Query: 300 KSKVDD-LWKDLVENPDKWWDNRL 322
S D+ LW+DL NP+KWW+ +
Sbjct: 140 ASSADEALWEDLQANPEKWWEQCM 163
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
Query: 299 KKSKVDDLWKDLVENPDKWWDNRLDKKSEKG----PDFKHK-ETGKPLWL--NYSPAWVT 351
+ +V W+DL NP WWDNR DK S +G PDF++K + GK +W+ +PAWV
Sbjct: 54 RAQQVVAFWEDLRANPGDWWDNREDKASGRGNPNIPDFRNKMDRGKAVWIVDRCAPAWVR 113
Query: 352 SQL---PP 356
L PP
Sbjct: 114 EWLQQHPP 121
>gi|226507188|ref|NP_001143553.1| uncharacterized protein LOC100276246 [Zea mays]
gi|195622390|gb|ACG33025.1| hypothetical protein [Zea mays]
Length = 293
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 58 KPSEIPFQVKVANSVNLIGHVDAPVQ-FQTSSDGKHWAGTVI-------VQHAASHSLWI 109
+PS + + N +LIG + APV+ TS A T + ++S ++ +
Sbjct: 50 RPSTVSKKGLTWNWCSLIGRLAAPVRPIDTSFLEVPRAYTFLSVTLSSPAPSSSSSNINV 109
Query: 110 PILFEGDLAHIASSHLKKDDHVHIAGQLTAD---PPAIEGQANVQVMVHSLNLIEPTSQK 166
+ G+LA++ HLK DD V+++G L + P+ E ++ V LN + ++K
Sbjct: 110 TLQLNGELANVGLKHLKHDDLVYVSGHLGSYHKVSPSGERHIVYKIYVRELNYVVDQNKK 169
Query: 167 RMFFVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRY 226
+ ++++ + + L W+ NP +W D R K Y
Sbjct: 170 PQNDADSTSPPSMTSVTLQM-LKENECIGRLRLWQVFFANPYEWWDNRRSKPCA----NY 224
Query: 227 PDFKRKDGTLPLWLN-SAPDWVLSELE 252
PDFK KD +WL P WV +LE
Sbjct: 225 PDFKHKDTREKIWLRPDDPPWVRKQLE 251
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 306 LWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNY-SPAWVTSQL 354
LW+ NP +WWDNR K PDFKHK+T + +WL P WV QL
Sbjct: 201 LWQVFFANPYEWWDNRRSKPCANYPDFKHKDTREKIWLRPDDPPWVRKQL 250
>gi|238012668|gb|ACR37369.1| unknown [Zea mays]
Length = 73
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 85 QTSSDGKHWAGTVIVQHAASHS--LWIPILFEGDLAHIASSHLKKDDHVHIAGQLTADPP 142
Q DG+ A +V+V +S W+PI+F+ + A IA+SHLK++D V+++G+LT D P
Sbjct: 2 QRLPDGRFSAVSVLVHDRGINSPKFWVPIVFKDNWAQIAASHLKENDLVYVSGKLTCDGP 61
>gi|414871883|tpg|DAA50440.1| TPA: hypothetical protein ZEAMMB73_618566 [Zea mays]
Length = 293
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 17/207 (8%)
Query: 58 KPSEIPFQVKVANSVNLIGHVDAPVQ-FQTSSDGKHWAGTVI-------VQHAASHSLWI 109
+PS + + N +LIG + APV+ TS A T + ++S ++ +
Sbjct: 50 RPSTVSKKGLTWNWCSLIGRLAAPVRPIDTSFLEVPRAYTFLSVTLSSPAPSSSSSNINV 109
Query: 110 PILFEGDLAHIASSHLKKDDHVHIAGQLTAD---PPAIEGQANVQVMVHSLNLIEPTSQK 166
+ G+LA++ HLK DD V+++G L + P+ E ++ V LN + ++K
Sbjct: 110 TLQLNGELANVGLKHLKHDDLVYVSGHLGSYHKVSPSGERHIVYKIYVRELNYVVDQNKK 169
Query: 167 RMFFVSKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRY 226
+ ++++ + + L W+ NP +W D R K Y
Sbjct: 170 PQNDADSTSPPSMTSVTLQM-LKENECIGRLRLWQVFFANPYEWWDNRRSKPWA----NY 224
Query: 227 PDFKRKDGTLPLWLN-SAPDWVLSELE 252
PDFK KD +WL P WV +LE
Sbjct: 225 PDFKHKDTREKIWLRPDDPPWVRKQLE 251
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 306 LWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLNY-SPAWVTSQL 354
LW+ NP +WWDNR K PDFKHK+T + +WL P WV QL
Sbjct: 201 LWQVFFANPYEWWDNRRSKPWANYPDFKHKDTREKIWLRPDDPPWVRKQL 250
>gi|168048334|ref|XP_001776622.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672067|gb|EDQ58610.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 142
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 18/82 (21%)
Query: 289 DDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDK---------------KSEKGPDFK 333
DD + + + +D+LW + P +WWDNR+ K ++ + PD K
Sbjct: 37 DDPSSRQSEENSQTIDELW-EYFAGPSQWWDNRIHKLERCTPGLSTVEERLRNPRSPDLK 95
Query: 334 HKETGKPLWLN--YSPAWVTSQ 353
HK TGK LW++ ++P WV Q
Sbjct: 96 HKVTGKALWIDGCFTPEWVKFQ 117
>gi|384252371|gb|EIE25847.1| hypothetical protein COCSUDRAFT_40099 [Coccomyxa subellipsoidea
C-169]
Length = 749
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 299 KKSKVDDLWKDLVENPDKWWDNRLDKKS-EKGPDFKHKETGKPLWLNYSPAWV 350
KK V+ LW+ P + D R K+ K PDFKH E+G LWLN +P WV
Sbjct: 10 KKPSVEALWRQFFAEPGSFQDLRPKKEGIAKRPDFKHSESGLVLWLNTAPDWV 62
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 184 VKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSA 243
V + KK AL WR P ++D R K +G+ K PDFK + L LWLN+A
Sbjct: 4 VDLQPKKKPSVEAL--WRQFFAEPGSFQDLRPKK-EGIAK--RPDFKHSESGLVLWLNTA 58
Query: 244 PDWVL 248
PDWVL
Sbjct: 59 PDWVL 63
>gi|315123598|ref|YP_004065603.1| ssb1 [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
gi|419696095|ref|ZP_14223969.1| single-strand binding protein family [Campylobacter jejuni subsp.
jejuni LMG 23210]
gi|315018853|gb|ADT66945.1| ssb1 [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
gi|380675617|gb|EIB90515.1| single-strand binding protein family [Campylobacter jejuni subsp.
jejuni LMG 23210]
Length = 140
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 70 NSVNLIGHVDAPVQFQTSSDGKHWAGTVIV---------QHAASHSLWIPILFEGDLAHI 120
N+VNLIG++ + T++ G+ +A + + S + WIPI+ G A
Sbjct: 2 NNVNLIGYLGKDFEIGTTNSGRVYAKNSLAITKRWKNERGNEESSTTWIPIVLFGKSAES 61
Query: 121 ASSHLKKDDHVHIAGQLTAD 140
AS+H+KK +G+L+++
Sbjct: 62 ASTHIKKGSQFACSGELSSN 81
>gi|419559325|ref|ZP_14097111.1| single-strand binding protein family [Campylobacter coli 80352]
gi|380536770|gb|EIA61373.1| single-strand binding protein family [Campylobacter coli 80352]
Length = 140
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 70 NSVNLIGHVDAPVQFQTSSDGKHWAGTVIV---------QHAASHSLWIPILFEGDLAHI 120
N+VNLIG++ + T++ G+ +A + + S + WIPI+ G A
Sbjct: 2 NNVNLIGYLGKDFEIGTTNSGRVYAKNSLAITKRWKNERGNEESSTTWIPIVLFGKSAES 61
Query: 121 ASSHLKKDDHVHIAGQLTAD 140
AS+H+KK +G+L+++
Sbjct: 62 ASTHIKKGSQFACSGELSSN 81
>gi|261885233|ref|ZP_06009272.1| hypothetical protein CfetvA_08635 [Campylobacter fetus subsp.
venerealis str. Azul-94]
gi|283954286|ref|ZP_06371808.1| hypothetical protein C414_000160008 [Campylobacter jejuni subsp.
jejuni 414]
gi|283794191|gb|EFC32938.1| hypothetical protein C414_000160008 [Campylobacter jejuni subsp.
jejuni 414]
Length = 140
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 70 NSVNLIGHVDAPVQFQTSSDGKHWAGTVIV---------QHAASHSLWIPILFEGDLAHI 120
N+VNLIG++ + T++ G+ +A + + S + WIPI+ G A
Sbjct: 2 NNVNLIGYLGKDFEIGTTNSGRVYAKNSLAITKRWKNERGNEESSTTWIPIVLFGKSAES 61
Query: 121 ASSHLKKDDHVHIAGQLTADPPAIEGQANVQVMV 154
AS+H+KK +G+L+++ E N + M+
Sbjct: 62 ASTHIKKGSQFACSGELSSNQYQDE-DGNTRTML 94
>gi|51209546|ref|YP_063478.1| ssb1 [Campylobacter jejuni subsp. jejuni 81-176]
gi|68164413|ref|YP_247547.1| pTet19 [Campylobacter jejuni subsp. jejuni 81-176]
gi|121999282|ref|YP_001004035.1| single-strand binding protein family [Campylobacter jejuni subsp.
jejuni 81-176]
gi|419610294|ref|ZP_14144363.1| hypothetical protein cco93_02943 [Campylobacter coli H8]
gi|419618786|ref|ZP_14152314.1| single-strand binding protein family [Campylobacter jejuni subsp.
jejuni 129-258]
gi|39979724|gb|AAR29567.1| ssb1 [Campylobacter jejuni subsp. jejuni 81-176]
gi|60617819|gb|AAX31300.1| pTet19 [Campylobacter jejuni subsp. jejuni 81-176]
gi|87248852|gb|EAQ71816.1| Single-strand binding protein family [Campylobacter jejuni subsp.
jejuni 81-176]
gi|380590393|gb|EIB11407.1| hypothetical protein cco93_02943 [Campylobacter coli H8]
gi|380594303|gb|EIB15106.1| single-strand binding protein family [Campylobacter jejuni subsp.
jejuni 129-258]
Length = 141
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 70 NSVNLIGHVDAPVQFQTSSDGKHWAGTVIV---------QHAASHSLWIPILFEGDLAHI 120
N+VNLIG++ + T++ G+ +A + + S + WIPI+ G A
Sbjct: 2 NNVNLIGYLGKDFEVGTTNSGRVYAKNSLAITKRWKNERGNEESSTTWIPIVLFGKSAES 61
Query: 121 ASSHLKKDDHVHIAGQLTAD 140
AS+H+KK +G+L+++
Sbjct: 62 ASTHIKKGSQFACSGELSSN 81
>gi|419601649|ref|ZP_14136330.1| single-strand binding protein family [Campylobacter coli LMG 23344]
gi|380579583|gb|EIB01372.1| single-strand binding protein family [Campylobacter coli LMG 23344]
Length = 141
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 70 NSVNLIGHVDAPVQFQTSSDGKHWAGTVIV---------QHAASHSLWIPILFEGDLAHI 120
N+VNLIG++ + T++ G+ +A + + S + WIPI+ G A
Sbjct: 2 NNVNLIGYLGKDFEVGTTNSGRVYAKNSLAITKRWKNERGNEESSTTWIPIVLFGKSAES 61
Query: 121 ASSHLKKDDHVHIAGQLTAD 140
AS+H+KK +G+L+++
Sbjct: 62 ASTHIKKGSQFACSGELSSN 81
>gi|51209465|ref|YP_063428.1| ssb1 [Campylobacter coli]
gi|57505004|ref|ZP_00370955.1| single-strand binding protein, putative [Campylobacter coli RM2228]
gi|86154110|ref|ZP_01072310.1| single-strand binding protein family [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|317511378|ref|ZP_07968710.1| single-strand binding family protein [Campylobacter jejuni subsp.
jejuni 305]
gi|419542976|ref|ZP_14082079.1| single-strand binding protein family [Campylobacter coli 2548]
gi|419544719|ref|ZP_14083667.1| hypothetical protein cco106_05126 [Campylobacter coli 2553]
gi|419576459|ref|ZP_14113070.1| single-strand binding protein family [Campylobacter coli 1909]
gi|419585867|ref|ZP_14121907.1| single-strand binding protein family [Campylobacter coli 202/04]
gi|419589219|ref|ZP_14125024.1| single-strand binding protein family [Campylobacter coli 317/04]
gi|419594040|ref|ZP_14129227.1| single-strand binding protein family [Campylobacter coli LMG 9854]
gi|419607755|ref|ZP_14142005.1| single-strand binding protein family [Campylobacter coli LMG 9860]
gi|419619792|ref|ZP_14153252.1| single-strand binding protein family [Campylobacter jejuni subsp.
jejuni 51494]
gi|419623637|ref|ZP_14156762.1| single-strand binding protein family [Campylobacter jejuni subsp.
jejuni LMG 23218]
gi|419655075|ref|ZP_14185936.1| single-strand binding protein family [Campylobacter jejuni subsp.
jejuni 2008-988]
gi|39979673|gb|AAR29517.1| ssb1 [Campylobacter coli]
gi|57019214|gb|EAL55921.1| single-strand binding protein, putative [Campylobacter coli RM2228]
gi|85842412|gb|EAQ59627.1| single-strand binding protein family [Campylobacter jejuni subsp.
jejuni HB93-13]
gi|315929119|gb|EFV08347.1| single-strand binding family protein [Campylobacter jejuni subsp.
jejuni 305]
gi|380521451|gb|EIA47180.1| single-strand binding protein family [Campylobacter coli 2548]
gi|380524868|gb|EIA50446.1| hypothetical protein cco106_05126 [Campylobacter coli 2553]
gi|380549925|gb|EIA73651.1| single-strand binding protein family [Campylobacter coli 1909]
gi|380561322|gb|EIA84264.1| single-strand binding protein family [Campylobacter coli 202/04]
gi|380567761|gb|EIA90260.1| single-strand binding protein family [Campylobacter coli LMG 9854]
gi|380568030|gb|EIA90516.1| single-strand binding protein family [Campylobacter coli 317/04]
gi|380582885|gb|EIB04483.1| single-strand binding protein family [Campylobacter coli LMG 9860]
gi|380600488|gb|EIB20823.1| single-strand binding protein family [Campylobacter jejuni subsp.
jejuni LMG 23218]
gi|380602224|gb|EIB22512.1| single-strand binding protein family [Campylobacter jejuni subsp.
jejuni 51494]
gi|380637595|gb|EIB55216.1| single-strand binding protein family [Campylobacter jejuni subsp.
jejuni 2008-988]
Length = 140
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 70 NSVNLIGHVDAPVQFQTSSDGKHWAGTVIV---------QHAASHSLWIPILFEGDLAHI 120
N+VNLIG++ + T++ G+ +A + + S + WIPI+ G A
Sbjct: 2 NNVNLIGYLGKDFEVGTTNSGRVYAKNSLAITKRWKNERGNEESSTTWIPIVLFGKSAES 61
Query: 121 ASSHLKKDDHVHIAGQLTAD 140
AS+H+KK +G+L+++
Sbjct: 62 ASTHIKKGSQFACSGELSSN 81
>gi|242033677|ref|XP_002464233.1| hypothetical protein SORBIDRAFT_01g014670 [Sorghum bicolor]
gi|241918087|gb|EER91231.1| hypothetical protein SORBIDRAFT_01g014670 [Sorghum bicolor]
Length = 166
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 284 SKPVLDDQTQKSNYVKKSKVDDLWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWL 343
S P + Q QK N LW+ NP +WWDNR K DFKHK+T + +WL
Sbjct: 55 SMPSVTPQMQKENECIGRL--RLWQVFFANPYEWWDNRQSKPWPTYADFKHKDTREKIWL 112
Query: 344 N-YSPAWVTSQL 354
P WV QL
Sbjct: 113 RPDDPPWVRKQL 124
>gi|56388384|gb|AAV86971.1| preprotein translocase subunit [Anaplasma marginale str. St.
Maries]
Length = 896
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 172 SKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKR 231
+++ E+ +D+ ++ S + GD LS + L++ + R + SDK+KG++K KR
Sbjct: 577 TERHESRRIDNQLR-GRSGRQGDPGLSKFFLSLED-DLLRIFGSDKVKGMLKK--LGMKR 632
Query: 232 KDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQ 291
+ W++ A + ++E +D K +L R + + + + VVF++ VLD+
Sbjct: 633 GEAIQHKWISKAIERAQKKVEARNYDIRKSLL----RFDDVINEQRQVVFEQRNQVLDND 688
Query: 292 TQKSNYVKKSKVDDLWKDLVENPDKWWD 319
T ++ S DL +V+ DK++D
Sbjct: 689 TYDFAFMYHSVNQDLVSRVVK--DKYYD 714
>gi|222475517|ref|YP_002563934.1| preprotein translocase subunit SecA [Anaplasma marginale str.
Florida]
gi|222419655|gb|ACM49678.1| preprotein translocase subunit (secA) [Anaplasma marginale str.
Florida]
Length = 896
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 172 SKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKR 231
+++ E+ +D+ ++ S + GD LS + L++ + R + SDK+KG++K KR
Sbjct: 577 TERHESRRIDNQLR-GRSGRQGDPGLSKFFLSLED-DLLRIFGSDKVKGMLKK--LGMKR 632
Query: 232 KDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQ 291
+ W++ A + ++E +D K +L R + + + + VVF++ VLD+
Sbjct: 633 GEAIQHKWISKAIERAQKKVEARNYDIRKSLL----RFDDVINEQRQVVFEQRNQVLDND 688
Query: 292 TQKSNYVKKSKVDDLWKDLVENPDKWWD 319
T ++ S DL +V+ DK++D
Sbjct: 689 TYDFAFMYHSVNQDLVSRVVK--DKYYD 714
>gi|254995322|ref|ZP_05277512.1| preprotein translocase subunit SecA [Anaplasma marginale str.
Mississippi]
Length = 871
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 172 SKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKR 231
+++ E+ +D+ ++ S + GD LS + L++ + R + SDK+KG++K KR
Sbjct: 552 TERHESRRIDNQLR-GRSGRQGDPGLSKFFLSLED-DLLRIFGSDKVKGMLKK--LGMKR 607
Query: 232 KDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQ 291
+ W++ A + ++E +D K +L R + + + + VVF++ VLD+
Sbjct: 608 GEAIQHKWISKAIERAQKKVEARNYDIRKSLL----RFDDVINEQRQVVFEQRNQVLDND 663
Query: 292 TQKSNYVKKSKVDDLWKDLVENPDKWWD 319
T ++ S DL +V+ DK++D
Sbjct: 664 TYDFAFMYHSVNQDLVSRVVK--DKYYD 689
>gi|255003504|ref|ZP_05278468.1| preprotein translocase subunit SecA [Anaplasma marginale str.
Puerto Rico]
gi|255004626|ref|ZP_05279427.1| preprotein translocase subunit SecA [Anaplasma marginale str.
Virginia]
Length = 872
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 172 SKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKR 231
+++ E+ +D+ ++ S + GD LS + L++ + R + SDK+KG++K KR
Sbjct: 553 TERHESRRIDNQLR-GRSGRQGDPGLSKFFLSLED-DLLRIFGSDKVKGMLKK--LGMKR 608
Query: 232 KDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQ 291
+ W++ A + ++E +D K +L R + + + + VVF++ VLD+
Sbjct: 609 GEAIQHKWISKAIERAQKKVEARNYDIRKSLL----RFDDVINEQRQVVFEQRNQVLDND 664
Query: 292 TQKSNYVKKSKVDDLWKDLVENPDKWWD 319
T ++ S DL +V+ DK++D
Sbjct: 665 TYDFAFMYHSVNQDLVSRVVK--DKYYD 690
>gi|419561579|ref|ZP_14099155.1| single-strand binding protein family [Campylobacter coli 86119]
gi|380534676|gb|EIA59440.1| single-strand binding protein family [Campylobacter coli 86119]
Length = 141
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 70 NSVNLIGHVDAPVQFQTSSDGKHWAGTVIV---------QHAASHSLWIPILFEGDLAHI 120
N+VNLIG++ + T++ G+ +A + + S + WIPI+ G A
Sbjct: 2 NNVNLIGYLGKDFEVGTTNSGRVYAKNSLAITKRWKNERGNEESSTTWIPIVLFGKSAES 61
Query: 121 ASSHLKKDDHVHIAGQLTA 139
AS+H+KK +G+L++
Sbjct: 62 ASTHIKKGSQFACSGELSS 80
>gi|161544980|ref|YP_154226.2| preprotein translocase subunit SecA [Anaplasma marginale str. St.
Maries]
gi|172045889|sp|Q5P9Q9.2|SECA_ANAMM RecName: Full=Protein translocase subunit SecA
Length = 872
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 76/148 (51%), Gaps = 10/148 (6%)
Query: 172 SKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKR 231
+++ E+ +D+ ++ S + GD LS + L++ + R + SDK+KG++K KR
Sbjct: 553 TERHESRRIDNQLR-GRSGRQGDPGLSKFFLSLED-DLLRIFGSDKVKGMLKK--LGMKR 608
Query: 232 KDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQ 291
+ W++ A + ++E +D K +L R + + + + VVF++ VLD+
Sbjct: 609 GEAIQHKWISKAIERAQKKVEARNYDIRKSLL----RFDDVINEQRQVVFEQRNQVLDND 664
Query: 292 TQKSNYVKKSKVDDLWKDLVENPDKWWD 319
T ++ S DL +V+ DK++D
Sbjct: 665 TYDFAFMYHSVNQDLVSRVVK--DKYYD 690
>gi|384442332|ref|YP_005660368.1| single-strand binding protein family [Campylobacter jejuni subsp.
jejuni S3]
gi|315059203|gb|ADT73531.1| single-strand binding protein family [Campylobacter jejuni subsp.
jejuni S3]
Length = 141
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 70 NSVNLIGHVDAPVQFQTSSDGKHWAGTVIV---------QHAASHSLWIPILFEGDLAHI 120
N+VNLIG++ + T++ G+ +A + + S ++WIPI+ G A
Sbjct: 2 NNVNLIGYLGKDFEIGTTNSGRIFAKNSLAITKRWKNERGNEESSTVWIPIVLFGKSAES 61
Query: 121 ASSHLKKDDHVHIAGQLTA 139
AS+H++K +G+L++
Sbjct: 62 ASTHIRKGSQFACSGELSS 80
>gi|224063555|ref|XP_002301202.1| predicted protein [Populus trichocarpa]
gi|222842928|gb|EEE80475.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 306 LWKDLVENPDKWWDNRLDKKSEKGPDFKHKETGKPLWLN 344
LW+ + +WWD R +KK+ + PDFKH++TG+ L LN
Sbjct: 178 LWQGFFTSHHEWWDYRNNKKNSRSPDFKHRDTGEALRLN 216
>gi|419567273|ref|ZP_14104489.1| single-strand binding protein family [Campylobacter coli 1148]
gi|419668362|ref|ZP_14198245.1| single-strand binding protein family [Campylobacter jejuni subsp.
jejuni 1997-10]
gi|380544053|gb|EIA68135.1| single-strand binding protein family [Campylobacter coli 1148]
gi|380642912|gb|EIB60160.1| single-strand binding protein family [Campylobacter jejuni subsp.
jejuni 1997-10]
Length = 141
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 70 NSVNLIGHVDAPVQFQTSSDGKHWAGTVIV---------QHAASHSLWIPILFEGDLAHI 120
N+VNLIG++ + ++ G+ +A + + S + WIPI+ G A
Sbjct: 2 NNVNLIGYLGKDFEVGATNSGRVYAKNSLAITKRWKNERGNEESSTTWIPIVLFGKSAES 61
Query: 121 ASSHLKKDDHVHIAGQLTAD 140
AS+H+KK +G+L+++
Sbjct: 62 ASTHIKKGSQFACSGELSSN 81
>gi|237751890|ref|ZP_04582370.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229376723|gb|EEO26814.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 140
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 70 NSVNLIGHVDAPVQFQTSSDGKHWAGTVIV---------QHAASHSLWIPILFEGDLAHI 120
N+VNLIG++ + +S GK +A + + S + WIPI+ G A
Sbjct: 2 NNVNLIGYLGKDFEVGNTSGGKLYAKNSLAITKRWKNEKGNDESSTTWIPIVLFGKSAES 61
Query: 121 ASSHLKKDDHVHIAGQLTADPPAIEGQANVQVMV 154
AS ++KK +G+L++ E Q NV+ +
Sbjct: 62 ASMYIKKGSQFACSGELSSSQYTDE-QGNVKTTL 94
>gi|37700323|gb|AAR00613.1| unknown protein [Oryza sativa Japonica Group]
gi|108709797|gb|ABF97592.1| Single-strand binding protein family protein, expressed [Oryza
sativa Japonica Group]
Length = 183
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 14/121 (11%)
Query: 59 PSEIPFQVKVANSVNLIGHVDAPVQ-FQTSSDGKHWAGTVIVQHAASH--------SLWI 109
P +P + NS +LIG +D PV+ SSD + A T + ++ + +
Sbjct: 45 PPVVPRRGLPRNSCSLIGRLDGPVRPCGGSSDERPMAYTFLSVSSSPSSPPSSSPSNFRV 104
Query: 110 PILFEGDLAHIASSHLKKDDHVHIAGQLTA----DPPAIEGQANVQVMVHSLNLIEPTSQ 165
+ +G+LAH++ HLK++D V+++G L + DP E ++ V LN + +Q
Sbjct: 105 TLNLQGELAHVSLKHLKQNDLVYVSGLLNSYHKVDPSG-EKHTFYKIHVTDLNYVLDQNQ 163
Query: 166 K 166
+
Sbjct: 164 R 164
>gi|419572828|ref|ZP_14109683.1| hypothetical protein cco5_08310 [Campylobacter coli 132-6]
gi|380549491|gb|EIA73300.1| hypothetical protein cco5_08310 [Campylobacter coli 132-6]
Length = 152
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 14/119 (11%)
Query: 70 NSVNLIGHVDAPVQFQTSSDGKHWAGTVIV---------QHAASHSLWIPILFEGDLAHI 120
N VNL G++ +T+ G +A T + +++ WIPI+ G A +
Sbjct: 2 NQVNLCGYLGKDFDMKTTPSGSAFAKTTLAVSENRRNEKGEYETYTSWIPIILFGRKAEV 61
Query: 121 ASSHLKKDDHVHIAGQLTADPPAIEGQANV----QVMVHSLNLIEPTSQKRMFFVSKKQ 175
A+ ++KK D G++ + N+ QV++ S IE +++ + K Q
Sbjct: 62 ANQYIKKGDRFLGTGKIVTS-SYTDQYGNMRYGWQVVISSFEFIEKKAEQNQDYKGKPQ 119
>gi|108709796|gb|ABF97591.1| Single-strand binding protein family protein, expressed [Oryza
sativa Japonica Group]
gi|215717048|dbj|BAG95411.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 152
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 39 HQFTKATTKTTTSKDVVWPKPSEIPFQVKVANSVNLIGHVDAPVQ-FQTSSDGKHWAGTV 97
H + ++ + + P +P + NS +LIG +D PV+ SSD + A T
Sbjct: 25 HAGGREEVESVAYRMSMLRPPPVVPRRGLPRNSCSLIGRLDGPVRPCGGSSDERPMAYTF 84
Query: 98 IVQHAASH--------SLWIPILFEGDLAHIASSHLKKDDHVHIAGQLTA 139
+ ++ + + + +G+LAH++ HLK++D V+++G L +
Sbjct: 85 LSVSSSPSSPPSSSPSNFRVTLNLQGELAHVSLKHLKQNDLVYVSGLLNS 134
>gi|38098416|gb|AAR10949.1| secA [Ehrlichia ruminantium]
Length = 730
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 77/150 (51%), Gaps = 14/150 (9%)
Query: 172 SKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKR 231
+++ E+ +D+ ++ S + GD LS + L++ + R + SDK+KG++K K+
Sbjct: 552 TERHESRRIDNQLR-GRSGRQGDPGLSKFFLSLED-DLLRIFGSDKIKGMLKK--LGMKK 607
Query: 232 KDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQ 291
+ W++ A + ++E +D K +L + N + + + VVFD+ +LD+
Sbjct: 608 GEAIQHTWISRAIEKAQHKVELRNYDIRKSLL----KFDNVINEQRKVVFDQRNRILDND 663
Query: 292 TQKSNYVKKSKVDDLWKDLVENP--DKWWD 319
+ + + + D+ D+V N DK+++
Sbjct: 664 SYNISLIYR----DINSDIVNNIIHDKYYN 689
>gi|307102634|gb|EFN50904.1| hypothetical protein CHLNCDRAFT_55453 [Chlorella variabilis]
Length = 293
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Query: 312 ENPDKWWDNRLDKKSEKGPDFKHKETGK---PLWLN--YSPAWVTSQL 354
+ P WWDNR+ K++ K PDFK K G LW+ +P WV ++L
Sbjct: 238 DEPPLWWDNRVGKRNPKAPDFKKKVGGSDAPALWVEGRNTPGWVKAEL 285
>gi|57239604|ref|YP_180740.1| preprotein translocase subunit SecA [Ehrlichia ruminantium str.
Welgevonden]
gi|58579593|ref|YP_197805.1| preprotein translocase subunit SecA [Ehrlichia ruminantium str.
Welgevonden]
gi|58617647|ref|YP_196846.1| preprotein translocase subunit SecA [Ehrlichia ruminantium str.
Gardel]
gi|75507494|sp|Q5FGQ3.1|SECA_EHRRG RecName: Full=Protein translocase subunit SecA
gi|81672766|sp|Q5HA05.1|SECA_EHRRW RecName: Full=Protein translocase subunit SecA
gi|57161683|emb|CAH58613.1| preprotein translocase SecA subunit [Ehrlichia ruminantium str.
Welgevonden]
gi|58417259|emb|CAI28372.1| Preprotein translocase secA subunit [Ehrlichia ruminantium str.
Gardel]
gi|58418219|emb|CAI27423.1| Preprotein translocase secA subunit [Ehrlichia ruminantium str.
Welgevonden]
Length = 870
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 77/150 (51%), Gaps = 14/150 (9%)
Query: 172 SKKQEAATVDHSVKISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKR 231
+++ E+ +D+ ++ S + GD LS + L++ + R + SDK+KG++K K+
Sbjct: 552 TERHESRRIDNQLR-GRSGRQGDPGLSKFFLSLED-DLLRIFGSDKIKGMLKK--LGMKK 607
Query: 232 KDGTLPLWLNSAPDWVLSELEGVVFDKSKPVLDDQTRKSNYVKKSKGVVFDKSKPVLDDQ 291
+ W++ A + ++E +D K +L + N + + + VVFD+ +LD+
Sbjct: 608 GEAIQHTWISRAIEKAQHKVELRNYDIRKSLL----KFDNVINEQRKVVFDQRNRILDND 663
Query: 292 TQKSNYVKKSKVDDLWKDLVENP--DKWWD 319
+ + + + D+ D+V N DK+++
Sbjct: 664 SYNISLIYR----DINSDIVNNIIHDKYYN 689
>gi|413933636|gb|AFW68187.1| hypothetical protein ZEAMMB73_594975, partial [Zea mays]
Length = 83
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 324 KKSEKGPDFKHKETGKPLWLN--YSPAWVTSQLPPVKSTVKS 363
+K+ + PDFKHK+TG+ LW++ +P WV SQL + S + S
Sbjct: 18 QKNPRYPDFKHKQTGEALWVDGRNNPNWVISQLAVLDSRMSS 59
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 224 PRYPDFKRKDGTLPLWLN--SAPDWVLSELEGVVFDKSKPVLDDQTRK 269
PRYPDFK K LW++ + P+WV+S+L V D L D RK
Sbjct: 21 PRYPDFKHKQTGEALWVDGRNNPNWVISQL--AVLDSRMSSLQDNERK 66
>gi|258569987|ref|XP_002543797.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904067|gb|EEP78468.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1504
Score = 38.5 bits (88), Expect = 4.6, Method: Composition-based stats.
Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 39/134 (29%)
Query: 185 KISSSKKDGDSALSSWRDLLDNPEQWRDYRSDKLKGLVKPRYPDFKRKDGTLPLWLNSAP 244
++SSS KD DSA +S R D + R YR+ + GL K S
Sbjct: 234 EVSSSNKDDDSAFASERT--DTLKGVRTYRASRSYGLAK-----------------KSFT 274
Query: 245 DWVLSELE--GVVFDKS----KPVLDDQTRKSNYVKKSKGVVFD--KSKPVLDDQTQK-- 294
W+LS LE GVVF + KP+ K + + D +++P++D++T K
Sbjct: 275 QWILSLLESIGVVFREHVLRIKPIPPS--------KDGRHIDLDAHRTEPLIDERTGKHY 326
Query: 295 -SNYVKKSKVDDLW 307
SNY++ S+ LW
Sbjct: 327 ISNYIRSSRY-SLW 339
>gi|256372630|ref|YP_003110454.1| single-strand binding protein [Acidimicrobium ferrooxidans DSM
10331]
gi|256009214|gb|ACU54781.1| single-strand binding protein [Acidimicrobium ferrooxidans DSM
10331]
Length = 129
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%)
Query: 70 NSVNLIGHVDAPVQFQTSSDGKHWAGTVIVQHAASHSLWIPILFEGDLAHIASSHLKKDD 129
N V LIG + + + + GKH I A HS + ++ G A A+ +L K
Sbjct: 25 NQVTLIGRLISSPDLRETPSGKHVTTVRIAVQAGYHSGFFDVVLWGQAAEFATRYLTKGR 84
Query: 130 HVHIAGQL 137
V++AG+L
Sbjct: 85 LVYVAGRL 92
>gi|297826069|ref|XP_002880917.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297326756|gb|EFH57176.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 154
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 323 DKKSEKGPDFKHKETGKPLWLNYS-PAWVTSQL 354
DKKS + DFKHK+TG+ LWL+ P W+T +L
Sbjct: 98 DKKSPRQHDFKHKDTGEALWLDSDIPDWITRRL 130
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.129 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,023,542,680
Number of Sequences: 23463169
Number of extensions: 259771211
Number of successful extensions: 510925
Number of sequences better than 100.0: 141
Number of HSP's better than 100.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 510372
Number of HSP's gapped (non-prelim): 252
length of query: 364
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 220
effective length of database: 8,980,499,031
effective search space: 1975709786820
effective search space used: 1975709786820
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 77 (34.3 bits)