Your job contains 1 sequence.
>017904
MEKLRRIVNEIAYAQDHAKLTPIQSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLP
VPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYAGGDEVRMLERHLLERPAK
IGKNCINPKVGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLR
EPLMALKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSK
IPLTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEE
LEGKFNPKPIVVVTEKDYDRDPEILMHLEAYKVLVLCSKLQIIPCRGCTEDSFKLLLKEL
VDVK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017904
(364 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2085765 - symbol:LpxK "AT3G20480" species:3702... 688 4.0e-106 2
UNIPROTKB|Q9KQX0 - symbol:lpxK "Tetraacyldisaccharide 4'-... 250 5.1e-26 2
TIGR_CMR|VC_1877 - symbol:VC_1877 "tetraacyldisaccharide ... 250 5.1e-26 2
TIGR_CMR|SO_2801 - symbol:SO_2801 "tetraacyldisaccharide ... 258 5.6e-25 2
TIGR_CMR|CPS_2126 - symbol:CPS_2126 "tetraacyldisaccharid... 253 1.1e-21 1
TIGR_CMR|GSU_2258 - symbol:GSU_2258 "tetraacyldisaccharid... 231 8.3e-18 1
TIGR_CMR|CBU_0857 - symbol:CBU_0857 "tetraacyldisaccharid... 227 1.2e-17 1
TIGR_CMR|SPO_3445 - symbol:SPO_3445 "tetraacyldisaccharid... 212 1.9e-15 1
UNIPROTKB|P27300 - symbol:lpxK species:83333 "Escherichia... 135 2.0e-06 2
>TAIR|locus:2085765 [details] [associations]
symbol:LpxK "AT3G20480" species:3702 "Arabidopsis
thaliana" [GO:0009029 "tetraacyldisaccharide 4'-kinase activity"
evidence=ISS;IMP] [GO:0009245 "lipid A biosynthetic process"
evidence=ISS] [GO:0016020 "membrane" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:2001289 "lipid X metabolic
process" evidence=IMP] [GO:0019243 "methylglyoxal catabolic process
to D-lactate" evidence=RCA] HAMAP:MF_00409 InterPro:IPR003758
Pfam:PF02606 GO:GO:0005739 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009245 EMBL:AP000410
UniPathway:UPA00359 EMBL:AY085541 IPI:IPI00530617
RefSeq:NP_566663.1 UniGene:At.38229 ProteinModelPortal:Q8LEA0
SMR:Q8LEA0 STRING:Q8LEA0 PaxDb:Q8LEA0 EnsemblPlants:AT3G20480.1
GeneID:821594 KEGG:ath:AT3G20480 TAIR:At3g20480 eggNOG:COG1663
HOGENOM:HOG000030676 InParanoid:Q8LEA0 OMA:GFQHRKL PhylomeDB:Q8LEA0
ProtClustDB:CLSN2688599 Genevestigator:Q8LEA0 GO:GO:0009029
TIGRFAMs:TIGR00682 Uniprot:Q8LEA0
Length = 395
Score = 688 (247.2 bits), Expect = 4.0e-106, Sum P(2) = 4.0e-106
Identities = 136/229 (59%), Positives = 171/229 (74%)
Query: 136 SGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVH 195
S KIG +ILDDGMQHWSL RDLEIVM+NGL PWGN L+P GPLREPL+AL+RAD+AVVH
Sbjct: 162 SEKIGCIILDDGMQHWSLSRDLEIVMLNGLNPWGNGHLMPHGPLREPLLALERADVAVVH 221
Query: 196 HADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVS 255
H DLI++Q+L+DIE ++ KKS+ IF+++MVP YLF+V N S + L A+ A+VLCVS
Sbjct: 222 HVDLITKQSLRDIENMIQGFKKSIPIFYSKMVPKYLFDVKNARSHVALEALRCASVLCVS 281
Query: 256 AIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIXXXXXXXXGKFNPKPIVVVTE 315
AIGSA+AFV+S++ G V+RLDF+DHH F+A D+E + K N KPI+VVTE
Sbjct: 282 AIGSADAFVKSIEMTGAHYVDRLDFSDHHLFEAEDVETMSRRAKGLEHKSNCKPIIVVTE 341
Query: 316 KDYDRDPEILMHLEAYKVLVLCSKLQIIPCRGCTEDSFKLLLKELVDVK 364
KDYDRDPEIL L++Y VLVLCS+LQI P DSF L + + K
Sbjct: 342 KDYDRDPEILKCLDSYTVLVLCSELQITPILETDVDSFNYTLMKALAAK 390
Score = 382 (139.5 bits), Expect = 4.0e-106, Sum P(2) = 4.0e-106
Identities = 82/178 (46%), Positives = 106/178 (59%)
Query: 1 MEKLRRIVNEIAYAQDHAKLTPIQXXXXXXXXXXXXXYGISLFLRHSFYRFGFFSKHRLP 60
MEKLR++VNEIAY + H + YG++L +R S YR+ KHRLP
Sbjct: 1 MEKLRKVVNEIAYTRVHTNSPALHRSLVPFLTIASSLYGVALQIRRSLYRYSLLQKHRLP 60
Query: 61 VPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYAGGDEVRMLERHLLERPAK 120
VPVISVGNL+WGGNGKTPMVE+++ L DS ++PLILTRGYAGGDEV+MLERHL P K
Sbjct: 61 VPVISVGNLSWGGNGKTPMVEYISQFLVDSGLTPLILTRGYAGGDEVKMLERHLRGGPVK 120
Query: 121 IGKNCINPKVGSHLKSGKIGAVI---------LDDGMQHWSLRRDLE-IVMVNGLMPW 168
IG N + L K G V L + Q W++ + I++ +G+ W
Sbjct: 121 IGVGA-NRAATAALFLDKYGCVDSSSLRSFFDLHERAQVWTISEKIGCIILDDGMQHW 177
>UNIPROTKB|Q9KQX0 [details] [associations]
symbol:lpxK "Tetraacyldisaccharide 4'-kinase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0009029 "tetraacyldisaccharide 4'-kinase activity"
evidence=ISS] [GO:0009245 "lipid A biosynthetic process"
evidence=ISS] HAMAP:MF_00409 InterPro:IPR003758 Pfam:PF02606
GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0009245
UniPathway:UPA00359 eggNOG:COG1663 GO:GO:0009029 TIGRFAMs:TIGR00682
KO:K00912 ProtClustDB:PRK00652 OMA:PDHYDFA PIR:C82146
RefSeq:NP_231511.1 DNASU:2613631 GeneID:2613631 KEGG:vch:VC1877
PATRIC:20082796 Uniprot:Q9KQX0
Length = 336
Score = 250 (93.1 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 59/174 (33%), Positives = 99/174 (56%)
Query: 38 YGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLIL 97
+G+ R Y+ G +R P+PV+ VGN+T GGNGKTP+V +L L + P ++
Sbjct: 28 FGVISRSRRKAYQTGDKPSYRAPLPVVVVGNITAGGNGKTPVVVWLVETLQNLGYRPGVV 87
Query: 98 TRGY-AGGDEVRML------ERHLLERPAKIGKN-----CINP----KVGSHLKSGKIGA 141
+RGY A ++ +H + P I + ++P V + L+ G +
Sbjct: 88 SRGYGAKAPSYPLVVNEQTPAQHCGDEPKLIFQRTKAPVAVDPVRSQAVKALLEHG-VNV 146
Query: 142 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVH 195
++ DDG+QH++L+RD+EI +V+G+ +GN++L+PLGPLREP+ L D + +
Sbjct: 147 IVTDDGLQHYALQRDIEIAVVDGVRRFGNQELIPLGPLREPVSRLDEVDFIITN 200
Score = 59 (25.8 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 245 AVCNANVLCVSA-IGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMI 294
AV LC A IG + F +L++L V+ F DH +F A + +
Sbjct: 228 AVSKLTRLCAMAGIGHPSRFFNTLRELNADLVHCQGFADHQAFDAAQLNQL 278
>TIGR_CMR|VC_1877 [details] [associations]
symbol:VC_1877 "tetraacyldisaccharide 4`-kinase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0009029
"tetraacyldisaccharide 4'-kinase activity" evidence=ISS]
[GO:0009245 "lipid A biosynthetic process" evidence=ISS]
HAMAP:MF_00409 InterPro:IPR003758 Pfam:PF02606 GO:GO:0005524
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0009245
UniPathway:UPA00359 eggNOG:COG1663 GO:GO:0009029 TIGRFAMs:TIGR00682
KO:K00912 ProtClustDB:PRK00652 OMA:PDHYDFA PIR:C82146
RefSeq:NP_231511.1 DNASU:2613631 GeneID:2613631 KEGG:vch:VC1877
PATRIC:20082796 Uniprot:Q9KQX0
Length = 336
Score = 250 (93.1 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 59/174 (33%), Positives = 99/174 (56%)
Query: 38 YGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLIL 97
+G+ R Y+ G +R P+PV+ VGN+T GGNGKTP+V +L L + P ++
Sbjct: 28 FGVISRSRRKAYQTGDKPSYRAPLPVVVVGNITAGGNGKTPVVVWLVETLQNLGYRPGVV 87
Query: 98 TRGY-AGGDEVRML------ERHLLERPAKIGKN-----CINP----KVGSHLKSGKIGA 141
+RGY A ++ +H + P I + ++P V + L+ G +
Sbjct: 88 SRGYGAKAPSYPLVVNEQTPAQHCGDEPKLIFQRTKAPVAVDPVRSQAVKALLEHG-VNV 146
Query: 142 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVH 195
++ DDG+QH++L+RD+EI +V+G+ +GN++L+PLGPLREP+ L D + +
Sbjct: 147 IVTDDGLQHYALQRDIEIAVVDGVRRFGNQELIPLGPLREPVSRLDEVDFIITN 200
Score = 59 (25.8 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 245 AVCNANVLCVSA-IGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMI 294
AV LC A IG + F +L++L V+ F DH +F A + +
Sbjct: 228 AVSKLTRLCAMAGIGHPSRFFNTLRELNADLVHCQGFADHQAFDAAQLNQL 278
>TIGR_CMR|SO_2801 [details] [associations]
symbol:SO_2801 "tetraacyldisaccharide 4-kinase"
species:211586 "Shewanella oneidensis MR-1" [GO:0009029
"tetraacyldisaccharide 4'-kinase activity" evidence=ISS]
[GO:0009245 "lipid A biosynthetic process" evidence=ISS]
HAMAP:MF_00409 InterPro:IPR003758 Pfam:PF02606 GO:GO:0005524
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0009245
UniPathway:UPA00359 eggNOG:COG1663 GO:GO:0009029 TIGRFAMs:TIGR00682
KO:K00912 ProtClustDB:PRK00652 HOGENOM:HOG000004953 OMA:PDHYDFA
RefSeq:NP_718379.1 GeneID:1170501 KEGG:son:SO_2801 PATRIC:23525239
Uniprot:Q8EDF1
Length = 335
Score = 258 (95.9 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 65/179 (36%), Positives = 102/179 (56%)
Query: 40 ISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTR 99
I+ F R S +R G S+ LPVPVI VGN+T GG+GKTP V +L L + +P +++R
Sbjct: 29 ITAF-RRSLFRLGIKSQTTLPVPVIVVGNITVGGSGKTPTVIYLIELLRNQGFNPGVISR 87
Query: 100 GYAG---GDEVRMLE---RHLLERPAKI-GKNCINPKVGS-HLKSGK-------IGAVIL 144
GY G +V ++ + + PA I + + VG+ +++ K + +I
Sbjct: 88 GYGAQFQGVKVVTVKDAATDVGDEPAMIVARTGVPMVVGAKRVETAKALLTQFAVDVIIC 147
Query: 145 DDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLISEQ 203
DDG+QH++L RD+E+V+++G GNR LLP GPLRE L + D +V+ ++ Q
Sbjct: 148 DDGLQHYALGRDIELVVIDGKRGLGNRNLLPAGPLREGEWRLNQVDFVIVNGGPAVANQ 206
Score = 41 (19.5 bits), Expect = 5.6e-25, Sum P(2) = 5.6e-25
Identities = 9/41 (21%), Positives = 20/41 (48%)
Query: 251 VLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDI 291
++ ++ IG F ++L + G F+DH ++ R +
Sbjct: 233 LVAMAGIGHPARFFETLTQQGYQVALSHSFDDHQAYDKRQL 273
>TIGR_CMR|CPS_2126 [details] [associations]
symbol:CPS_2126 "tetraacyldisaccharide 4'-kinase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0009029
"tetraacyldisaccharide 4'-kinase activity" evidence=ISS]
[GO:0009245 "lipid A biosynthetic process" evidence=ISS]
HAMAP:MF_00409 InterPro:IPR003758 Pfam:PF02606 GO:GO:0005524
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0009245
UniPathway:UPA00359 eggNOG:COG1663 GO:GO:0009029 TIGRFAMs:TIGR00682
KO:K00912 RefSeq:YP_268852.1 STRING:Q483B5 GeneID:3519196
KEGG:cps:CPS_2126 PATRIC:21467367 HOGENOM:HOG000004953 OMA:PDHYDFA
BioCyc:CPSY167879:GI48-2196-MONOMER Uniprot:Q483B5
Length = 343
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 85/265 (32%), Positives = 131/265 (49%)
Query: 44 LRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYAG 103
LR Y+ G +L PVI VGN+ GGNGKTP+V +L ++P +++RGY G
Sbjct: 35 LRRLSYKIGLSRSCQLSKPVIVVGNIGVGGNGKTPIVLYLVELTRLLGLTPGVISRGYGG 94
Query: 104 G--------DEVRMLERHLLERPAKIGKNCINP-KVGS-HLKSGKI----GA--VILDDG 147
DE + + P I + C P VGS + S K+ G +I DDG
Sbjct: 95 KAPHYPYLLDE-KSTSIEAGDEPILIQQRCQVPIAVGSDRIASAKLLIAQGCDIIISDDG 153
Query: 148 MQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLISEQNLKD 207
+QH+ L RDLE+V+V+G +GN LLP GPLRE L L ++D+ V+++ +N +D
Sbjct: 154 LQHYRLARDLELVVVDGKRLFGNGLLLPAGPLREGLWRLPKSDL-VIYNG-----KNDQD 207
Query: 208 IELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNAN--VLCVSAIGSANAFVQ 265
+ +K+ + + L + +I LT N V ++ IG+ F
Sbjct: 208 YQ------EKNYPCMHMTLAATELCNLLT-GERIYLTDFIRLNDSVNAIAGIGAPQRFFD 260
Query: 266 SLQKLGPCSVNRLDFNDHHSFQARD 290
+L++ +N+ F DHH+F D
Sbjct: 261 TLKEHQFKVINQQSFVDHHAFVLAD 285
>TIGR_CMR|GSU_2258 [details] [associations]
symbol:GSU_2258 "tetraacyldisaccharide 4'-kinase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0009029
"tetraacyldisaccharide 4'-kinase activity" evidence=ISS]
[GO:0009245 "lipid A biosynthetic process" evidence=ISS]
HAMAP:MF_00409 InterPro:IPR003758 Pfam:PF02606 GO:GO:0005524
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009245
UniPathway:UPA00359 eggNOG:COG1663 GO:GO:0009029 TIGRFAMs:TIGR00682
KO:K00912 RefSeq:NP_953307.1 GeneID:2685771 KEGG:gsu:GSU2258
PATRIC:22027371 HOGENOM:HOG000004954 OMA:KYYLSIG
ProtClustDB:CLSK828780 BioCyc:GSUL243231:GH27-2253-MONOMER
Uniprot:Q74AU2
Length = 353
Score = 231 (86.4 bits), Expect = 8.3e-18, P = 8.3e-18
Identities = 81/278 (29%), Positives = 128/278 (46%)
Query: 38 YGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLIL 97
YG+ + LR Y G + L PVISVGNLT GG GKTPMV +LA L ++
Sbjct: 34 YGLVVRLRALAYARGLSTVRHLDRPVISVGNLTVGGTGKTPMVAYLARRLMARGKRVAVI 93
Query: 98 TRGYAGG--DEVRMLE--RHLLERPAKIGKNCIN-----PK----VGSHLKSGKIGAV-- 142
+RGY G E R++ R ++ A+ G ++ P +G+ + + A+
Sbjct: 94 SRGYGGSLEGETRIVSDGRTIVLSAAEAGDEPVHLATSVPGLMTVIGTDRYTAGLLALEQ 153
Query: 143 ------ILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHH 196
ILDDG QH L RDL I++++ P GN + LP G LREP A++RAD+ V
Sbjct: 154 LDPDVFILDDGYQHLRLHRDLNILLMDCNRPLGNGRTLPAGLLREPQTAVRRADLVVYTR 213
Query: 197 ADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSA 256
+ + + + ++ ++P G + PL A+ + +
Sbjct: 214 C---TGGKAPAVHGMIPSCRAGHALTGAALLPD-----GEVQ---PLAALRGLRGVACAG 262
Query: 257 IGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMI 294
I F +L++ G V + F DH S+ R++ +
Sbjct: 263 IAEPEGFFDALRREGLDIVAAIPFADHASYGEREVSTL 300
>TIGR_CMR|CBU_0857 [details] [associations]
symbol:CBU_0857 "tetraacyldisaccharide 4'-kinase"
species:227377 "Coxiella burnetii RSA 493" [GO:0009029
"tetraacyldisaccharide 4'-kinase activity" evidence=ISS]
[GO:0009245 "lipid A biosynthetic process" evidence=ISS]
HAMAP:MF_00409 InterPro:IPR003758 Pfam:PF02606 GO:GO:0005524
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0009245
UniPathway:UPA00359 eggNOG:COG1663 GO:GO:0009029 TIGRFAMs:TIGR00682
KO:K00912 ProtClustDB:PRK00652 HOGENOM:HOG000004953 OMA:PDHYDFA
RefSeq:NP_819876.1 GeneID:1208750 KEGG:cbu:CBU_0857 PATRIC:17930413
BioCyc:CBUR227377:GJ7S-852-MONOMER Uniprot:Q83D83
Length = 325
Score = 227 (85.0 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 81/271 (29%), Positives = 125/271 (46%)
Query: 38 YGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLIL 97
Y I + +R Y G + PVP++ VGN+T GG+GKTP V +LA+ L + P ++
Sbjct: 26 YQIIVRIRRGLYAVGLKKISKFPVPIVIVGNITVGGSGKTPFVIWLANELKNRGFRPGVV 85
Query: 98 TRGYAGGDEVRMLERHLLER--PAKIGKNCIN-------PKV-----GS---HL-KSGKI 139
+RGY G + + + E P ++G + P V G+ HL ++ +
Sbjct: 86 SRGYGG--KANRFPQTVTENSDPLQVGDEAVLLMKKIDCPMVVCRDRGAAVKHLLRNFQC 143
Query: 140 GAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADL 199
VI DDG+QH+SL RDLEI +++ GN + LP GPLREP L D V
Sbjct: 144 DVVIGDDGLQHYSLGRDLEIALLDD-RHLGNGRCLPAGPLREPKSRLNTVDFVV------ 196
Query: 200 ISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGS 259
K L P+ ++++ N KI + V V+ IG+
Sbjct: 197 ----------------PKQLR-------PNEIYQLKNPAKKIDFNELKELTVHAVAGIGN 233
Query: 260 ANAFVQSLQKLGPCSVNRLDFNDHHSFQARD 290
F + L+ LG +V F DH+ +++ D
Sbjct: 234 PGYFFKQLETLG-ANVIAHPFRDHYFYRSED 263
>TIGR_CMR|SPO_3445 [details] [associations]
symbol:SPO_3445 "tetraacyldisaccharide 4'-kinase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0009029
"tetraacyldisaccharide 4'-kinase activity" evidence=ISS]
[GO:0009245 "lipid A biosynthetic process" evidence=ISS]
HAMAP:MF_00409 InterPro:IPR003758 Pfam:PF02606 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0009245
UniPathway:UPA00359 eggNOG:COG1663 GO:GO:0009029 TIGRFAMs:TIGR00682
KO:K00912 ProtClustDB:PRK00652 OMA:DEPVLIH HOGENOM:HOG000004954
RefSeq:YP_168641.1 GeneID:3194962 KEGG:sil:SPO3445 PATRIC:23380351
Uniprot:Q5LMW7
Length = 333
Score = 212 (79.7 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 63/181 (34%), Positives = 96/181 (53%)
Query: 41 SLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRG 100
+L+ R + R +PVPVI +GNL GG GKTP ++A L D+ P ++TRG
Sbjct: 26 ALYARATARRLAKGDPVSVPVPVICIGNLNAGGTGKTPSAIWVAERLRDAGHEPHVVTRG 85
Query: 101 YAGGDE--VRM-LERHLLER----P---AKIGKNCI-NPKVGSHLKSGKIGA--VILDDG 147
Y G E V++ RH E+ P A + + + + GA +ILDDG
Sbjct: 86 YGGTLEGPVQVDPRRHRAEQVGDEPLLLAAFAEVWVAKDRAAGTRAAAAAGASVIILDDG 145
Query: 148 MQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMA-LKRADIAVVHHADLISEQNLK 206
Q+ S+ +DL IV+V+ +GN + +P GPLREP+ L RAD+ V+ D +++ +
Sbjct: 146 FQNPSVAKDLSIVVVDAAQGFGNGRCIPAGPLREPVATGLARADL-VLALGDAQAQEQFR 204
Query: 207 D 207
D
Sbjct: 205 D 205
>UNIPROTKB|P27300 [details] [associations]
symbol:lpxK species:83333 "Escherichia coli K-12"
[GO:0016020 "membrane" evidence=IDA] [GO:0009029
"tetraacyldisaccharide 4'-kinase activity" evidence=IEA;IMP;IDA]
[GO:0009245 "lipid A biosynthetic process" evidence=IEA;IMP;IDA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0009244
"lipopolysaccharide core region biosynthetic process" evidence=IMP]
HAMAP:MF_00409 InterPro:IPR003758 Pfam:PF02606 GO:GO:0005524
GO:GO:0016020 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009245 GO:GO:0009244
UniPathway:UPA00359 eggNOG:COG1663 GO:GO:0009029 TIGRFAMs:TIGR00682
KO:K00912 ProtClustDB:PRK00652 HOGENOM:HOG000004953 EMBL:Z11796
PIR:B64831 RefSeq:NP_415435.1 RefSeq:YP_489187.1
ProteinModelPortal:P27300 SMR:P27300 DIP:DIP-10126N IntAct:P27300
PRIDE:P27300 EnsemblBacteria:EBESCT00000003674
EnsemblBacteria:EBESCT00000018286 GeneID:12931020 GeneID:945526
KEGG:ecj:Y75_p0887 KEGG:eco:b0915 PATRIC:32117043 EchoBASE:EB1381
EcoGene:EG11409 OMA:DEPVLIH
BioCyc:EcoCyc:TETRAACYLDISACC4KIN-MONOMER
BioCyc:ECOL316407:JW0898-MONOMER
BioCyc:MetaCyc:TETRAACYLDISACC4KIN-MONOMER Genevestigator:P27300
Uniprot:P27300
Length = 328
Score = 135 (52.6 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 35/113 (30%), Positives = 59/113 (52%)
Query: 90 SEISPLIL----TRGYAGGDEVRMLERHLLERPAKIG---KNCINPKVGSHLKSGKIGAV 142
+E PL+L T AG + V + +R + P + + + + H + +
Sbjct: 90 AESYPLLLSADTTTAQAGDEPVLIYQR--TDAPVAVSPVRSDAVKAILAQH---PDVQII 144
Query: 143 ILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVH 195
+ DDG+QH+ L RD+EIV+++G+ +GN LP GP+RE LK D +V+
Sbjct: 145 VTDDGLQHYRLARDVEIVVIDGVRRFGNGWWLPAGPMRERAGRLKSVDAVIVN 197
Score = 122 (48.0 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 26/49 (53%), Positives = 32/49 (65%)
Query: 58 RLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYAGGDE 106
R PVPV+ VGNLT GGNGKTP+V +L L I +++RGY G E
Sbjct: 43 RAPVPVVVVGNLTAGGNGKTPVVVWLVEQLQQRGIRVGVVSRGYGGKAE 91
Score = 39 (18.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 10/45 (22%), Positives = 19/45 (42%)
Query: 250 NVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMI 294
+V+ ++ IG F +L+ G + DH S D+ +
Sbjct: 231 HVVAMAGIGHPPRFFATLKMCGVQPEKCVPLADHQSLNHADVSAL 275
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.141 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 364 343 0.00096 116 3 11 22 0.49 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 608 (65 KB)
Total size of DFA: 224 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.46u 0.08s 27.54t Elapsed: 00:00:05
Total cpu time: 27.46u 0.08s 27.54t Elapsed: 00:00:05
Start: Fri May 10 04:29:23 2013 End: Fri May 10 04:29:28 2013