BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017904
(364 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LEA0|LPXK_ARATH Probable tetraacyldisaccharide 4'-kinase, mitochondrial
OS=Arabidopsis thaliana GN=LPXK PE=2 SV=1
Length = 395
Score = 436 bits (1120), Expect = e-121, Method: Compositional matrix adjust.
Identities = 218/390 (55%), Positives = 277/390 (71%), Gaps = 26/390 (6%)
Query: 1 MEKLRRIVNEIAYAQDHAKLTPIQSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLP 60
MEKLR++VNEIAY + H + SL+P L++ASSLYG++L +R S YR+ KHRLP
Sbjct: 1 MEKLRKVVNEIAYTRVHTNSPALHRSLVPFLTIASSLYGVALQIRRSLYRYSLLQKHRLP 60
Query: 61 VPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYAGGDEVRMLERHLLERPAK 120
VPVISVGNL+WGGNGKTPMVE+++ L DS ++PLILTRGYAGGDEV+MLERHL P K
Sbjct: 61 VPVISVGNLSWGGNGKTPMVEYISQFLVDSGLTPLILTRGYAGGDEVKMLERHLRGGPVK 120
Query: 121 IG---------------KNCINP-----------KVGSHLKSGKIGAVILDDGMQHWSLR 154
IG C++ + S KIG +ILDDGMQHWSL
Sbjct: 121 IGVGANRAATAALFLDKYGCVDSSSLRSFFDLHERAQVWTISEKIGCIILDDGMQHWSLS 180
Query: 155 RDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLISEQNLKDIELEMRD 214
RDLEIVM+NGL PWGN L+P GPLREPL+AL+RAD+AVVHH DLI++Q+L+DIE ++
Sbjct: 181 RDLEIVMLNGLNPWGNGHLMPHGPLREPLLALERADVAVVHHVDLITKQSLRDIENMIQG 240
Query: 215 IKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSANAFVQSLQKLGPCS 274
KKS+ IF+++MVP YLF+V N S + L A+ A+VLCVSAIGSA+AFV+S++ G
Sbjct: 241 FKKSIPIFYSKMVPKYLFDVKNARSHVALEALRCASVLCVSAIGSADAFVKSIEMTGAHY 300
Query: 275 VNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKDYDRDPEILMHLEAYKVL 334
V+RLDF+DHH F+A D+E + ++ + LE K N KPI+VVTEKDYDRDPEIL L++Y VL
Sbjct: 301 VDRLDFSDHHLFEAEDVETMSRRAKGLEHKSNCKPIIVVTEKDYDRDPEILKCLDSYTVL 360
Query: 335 VLCSKLQIIPCRGCTEDSFKLLLKELVDVK 364
VLCS+LQI P DSF L + + K
Sbjct: 361 VLCSELQITPILETDVDSFNYTLMKALAAK 390
>sp|B8CZC3|LPXK_HALOH Tetraacyldisaccharide 4'-kinase OS=Halothermothrix orenii (strain H
168 / OCM 544 / DSM 9562) GN=lpxK PE=3 SV=1
Length = 384
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 147/295 (49%), Gaps = 45/295 (15%)
Query: 63 VISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYA-------------------- 102
VISVGN+T GG GKTP+V +LA LA+ E ++++RGY
Sbjct: 65 VISVGNITAGGTGKTPLVIYLAKKLAE-ENRVVVISRGYQSQSEGEEPSVVSDGRNILTD 123
Query: 103 ---GGDEVRMLERHLLERPAKIGKNCINPKVGSHLKSGKIGA--VILDDGMQHWSLRRDL 157
GDEV M+ L P G N + L S + A +ILDDG QHW L+RD+
Sbjct: 124 VSEAGDEVYMMATLLGGVPLITGSNRYK---AARLASRRFNAEIIILDDGFQHWQLKRDV 180
Query: 158 EIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLISEQNLKDIELEMRDIKK 217
+IVM++GL P+G +L+P G LREPL LKRAD V+ A IS + L++I+ + +
Sbjct: 181 DIVMIDGLKPFGQGRLIPRGFLREPLSGLKRADFFVISRAHHISREKLQEIKDTLCQYNQ 240
Query: 218 SLSIFFTRMVPSYLFEVGN--------INSKIPLTAVCNANVLCVSAIGSANAFVQSLQK 269
+ ++ YL E+ I+ K PL + A V+ V +G+ +F + L+
Sbjct: 241 NAVVYEATTSSVYLKELSVASLEMKSIIHKKRPLDELKGAKVIAVCGLGNPRSFYRDLEI 300
Query: 270 LGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD---YDRD 321
G + L FNDHH ++ D + I + IV+ TEKD + RD
Sbjct: 301 SGAEVIETLSFNDHHQYRPDDFDKIINLARQ-----KAIDIVITTEKDAVKFSRD 350
>sp|Q2LVL1|LPXK_SYNAS Tetraacyldisaccharide 4'-kinase OS=Syntrophus aciditrophicus
(strain SB) GN=lpxK PE=3 SV=1
Length = 374
Score = 141 bits (355), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 163/348 (46%), Gaps = 50/348 (14%)
Query: 2 EKLRRIVNEIAYAQDHAKLTPIQSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPV 61
E+ RR+ + +D +S LL + S Y + + LR+ FY F RLP
Sbjct: 5 ERCRRLWEDPGPRKD-------RSPFALLLEVFSLFYRVGVVLRNDFYDRELFRSVRLPC 57
Query: 62 PVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYA------------------- 102
VISVGN+T GG GKTPMV LA L D P +L+RGY
Sbjct: 58 RVISVGNVTAGGTGKTPMVILLARLLKDLGYRPAVLSRGYGGKGKAPVNIVSDGASILMS 117
Query: 103 ---GGDEVRMLERHLLERPAKIGKN-CINPKVGSHLKSGKIGAVILDDGMQHWSLRRDLE 158
GGDE ++ R + P G + C+ + + ++ +ILDDG QH L RD+
Sbjct: 118 PLEGGDEPVLIARSVPGIPVLTGSDRCLTGR--NAIERMGADVLILDDGFQHRRLFRDIN 175
Query: 159 IVMVNGLMPWGNRKLLPLGPLRE-PLMALKRADIAV----VHHADLISEQNLKDIELEMR 213
IV+++ PWGN LLP GPLRE P AL+RADI + +H+ + ++E
Sbjct: 176 IVLLDSDRPWGNGFLLPRGPLREPPTRALRRADIVIRTGGMHNR---TSGEAAGTQVETG 232
Query: 214 D----IKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSANAFVQSLQK 269
D + +S IF P L + + K+ L + + + IG F ++L+
Sbjct: 233 DSGAVLLRSSPIFRGIHQPCALISL-DGGRKMDLQYLAGERICAFAGIGVPEQFRKTLES 291
Query: 270 LGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 317
LG V L + DHH + + D+ I++ +E + ++V TEKD
Sbjct: 292 LGAEIVEFLAYPDHHRYDSSDLAFIERTAKEARAE-----MIVTTEKD 334
>sp|A0KLY1|LPXK_AERHH Tetraacyldisaccharide 4'-kinase OS=Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240) GN=lpxK PE=3
SV=1
Length = 333
Score = 129 bits (323), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 146/304 (48%), Gaps = 48/304 (15%)
Query: 30 LLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLAD 89
LL+ + L+ I R YR G+ +R +PVI VGN++ GGNGKTP+V +L L
Sbjct: 15 LLAPFALLFAIISGTRRYAYRHGWRKGYRSSLPVIVVGNISVGGNGKTPVVVWLVEQLQA 74
Query: 90 SEISPLILTRGYAGGD-------EVRMLERHLLERPAKIGKNC-----INPKVGSHLK-- 135
P +++RGY G + + P I + C + PK ++
Sbjct: 75 RGYRPGVVSRGYGGKAPHYPYRLDAASTTAQAGDEPVLIARRCGCPVVVAPKRADAVRLL 134
Query: 136 --SGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAV 193
SG++ +I DDG+QH++L RD+E+V+V+G +GN LLP+GPLREP+ LKR D +
Sbjct: 135 EQSGEVDIIITDDGLQHYALARDIELVVVDGARRFGNACLLPMGPLREPVTRLKRVDAII 194
Query: 194 VHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLC 253
+ + E MR + VP + + PL A + V
Sbjct: 195 CNGGEPGRG------EYPMRLVAD---------VPR------RVRDEAPLAAPLSGPVDA 233
Query: 254 VSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVV 313
++ IG F +L+ LG R+ + DHH F RD EL G+F KP+ ++
Sbjct: 234 LAGIGHPPRFFATLEGLGYQLDQRVAYGDHHPFD-RD---------ELVGRFAGKPL-LM 282
Query: 314 TEKD 317
TEKD
Sbjct: 283 TEKD 286
>sp|Q8EDF1|LPXK_SHEON Tetraacyldisaccharide 4'-kinase OS=Shewanella oneidensis (strain
MR-1) GN=lpxK PE=3 SV=1
Length = 335
Score = 122 bits (306), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 159/329 (48%), Gaps = 56/329 (17%)
Query: 4 LRRIVNEIAYAQDHAKLTPIQSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPV 63
++ +VN+I Y Q H P++ L+PL S+L+ R S +R G S+ LPVPV
Sbjct: 1 MQALVNKIWY-QGH----PLRWLLLPL----SALFAFITAFRRSLFRLGIKSQTTLPVPV 51
Query: 64 ISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYAGGDE------VRMLERHLLER 117
I VGN+T GG+GKTP V +L L + +P +++RGY + V+ + +
Sbjct: 52 IVVGNITVGGSGKTPTVIYLIELLRNQGFNPGVISRGYGAQFQGVKVVTVKDAATDVGDE 111
Query: 118 PAKI-GKNCINPKVGSH--------LKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPW 168
PA I + + VG+ L + +I DDG+QH++L RD+E+V+++G
Sbjct: 112 PAMIVARTGVPMVVGAKRVETAKALLTQFAVDVIICDDGLQHYALGRDIELVVIDGKRGL 171
Query: 169 GNRKLLPLGPLREPLMALKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVP 228
GNR LLP GPLRE L + D +V+ ++ Q E+++R ++P
Sbjct: 172 GNRNLLPAGPLREGEWRLNQVDFVIVNGGPAVANQ----YEMQLRPCA---------VLP 218
Query: 229 SYLFEVGNINSKIPLTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQA 288
+S PL A ++ IG F ++L + G F+DH ++
Sbjct: 219 VSPAVTAEFDSTQPLVA--------MAGIGHPARFFETLTQQGYQVALSHSFDDHQAYD- 269
Query: 289 RDIEMIKKKLEELEGKFNPKPIVVVTEKD 317
K++L EL +P+ ++TEKD
Sbjct: 270 ------KRQLCELAAS---RPL-MMTEKD 288
>sp|B2KC48|LPXK_ELUMP Tetraacyldisaccharide 4'-kinase OS=Elusimicrobium minutum (strain
Pei191) GN=lpxK PE=3 SV=1
Length = 374
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 158/337 (46%), Gaps = 35/337 (10%)
Query: 30 LLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLAD 89
L + S Y + + Y G+ + + V+ VGN+T GG GKT V A LA+
Sbjct: 19 FLYVLSKGYELGTIVNKFLYENGWRKSYSVNTRVVCVGNITAGGTGKTTAVLLAARTLAE 78
Query: 90 SEISPLILTRGY----------------------AGGDEVRMLERHL--LERPAKIGKNC 125
+ I I++RGY GDE M+ R L ++ P I ++
Sbjct: 79 AGIRTAIISRGYKRDKKNKNPVVLFDDELENNWVTAGDEPFMMSRALADVKVPIVIHEDR 138
Query: 126 INPKVGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMA 185
+ LK K ++LDDG QH+ L+RD IV+++ P+G +LLP G LRE L
Sbjct: 139 -HLAATEALKRFKSQVLLLDDGFQHFRLKRDANIVLIDARNPFGGGQLLPYGTLREGLSG 197
Query: 186 LKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTA 245
LKRA++ ++ H++ ++ +DI+ ++R + + I P + F++ N + K+PL
Sbjct: 198 LKRANLVLLTHSNQADQRKKEDIKDQIRLQNEDIEILEAVHQPEHYFDICN-SVKVPLNH 256
Query: 246 VCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKF 305
+ SAIG F +L+ LG V + DH + D+ K +L G+
Sbjct: 257 L-KGEAGVFSAIGEPGGFEDTLKDLGLKLVKVWRYPDHRRYTEEDL----KTFVDLAGE- 310
Query: 306 NPKPIVVVTEKDYDRDPEILMHLEAYKVLVLCSKLQI 342
NP +V T KD+ + PE + V VL ++I
Sbjct: 311 NP---LVTTFKDFVKFPENWRDILKKNVYVLSVSMKI 344
>sp|Q7UNW7|LPXK_RHOBA Tetraacyldisaccharide 4'-kinase OS=Rhodopirellula baltica (strain
SH1) GN=lpxK PE=3 SV=1
Length = 365
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 144/304 (47%), Gaps = 14/304 (4%)
Query: 22 PIQSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVE 81
P S L AS Y ++ R Y G VPVISVGNLT GG GKTP+V
Sbjct: 16 PFSSMARGALWCASGFYNVAARHRRRQYDSGNREICNAGVPVISVGNLTTGGTGKTPVVA 75
Query: 82 FLAHCLADSEISPLILTRGYAGGD-----EVRMLERHLLERPAKIGKNCINPKVGSHLKS 136
L L + I++RGY D E L+ L + P + + + +
Sbjct: 76 DLCRRLRAMDFRVTIISRGYGASDGRMNDEAMELQERLPDVPHVQHPDRVE---AARIAV 132
Query: 137 GKIGA--VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVV 194
++ A +++DDG QH L+RDL+IV+++ P+G +LP G LREPL ++ RAD ++
Sbjct: 133 EELAAEVLVMDDGFQHRRLQRDLDIVVIDATCPFGYGHVLPRGTLREPLDSVTRADWVLI 192
Query: 195 HHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYL-FEVGNINSKIPLTAVCNANVLC 253
D + + + I + + T PS + VG+ + + + + V
Sbjct: 193 TRVDQVDPEEVLAIRSTIAQHAPDCPVLETEHRPSTIQSSVGDWEA---IEVLIDQPVAL 249
Query: 254 VSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVV 313
VSAIG+ +AF Q++ G V+ L DH S++ E ++ + +L+G P ++
Sbjct: 250 VSAIGNPDAFEQTVLDCGAIVVDHLRLPDHDSYERATREKLRSWVTKLKGGPQPPQRLLC 309
Query: 314 TEKD 317
T KD
Sbjct: 310 THKD 313
>sp|A5F728|LPXK_VIBC3 Tetraacyldisaccharide 4'-kinase OS=Vibrio cholerae serotype O1
(strain ATCC 39541 / Ogawa 395 / O395) GN=lpxK PE=3 SV=2
Length = 335
Score = 121 bits (304), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 149/314 (47%), Gaps = 52/314 (16%)
Query: 22 PIQSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVE 81
P+ L PLL S L+G+ R Y+ G +R P+PV+ VGN+T GGNGKTP+V
Sbjct: 11 PLGYLLWPLLWPFSVLFGVISRSRRKAYQTGDKPSYRAPLPVVVVGNITAGGNGKTPVVV 70
Query: 82 FLAHCLADSEISPLILTRGYAG------------------GDEVRMLERHLLERPAKIGK 123
+L L + P +++RGY GDE +++ A +
Sbjct: 71 WLVETLQNLGYRPGVVSRGYGAKAPSYPLVVNEQTPAQHCGDEPKLI---FQRTKAPVAV 127
Query: 124 NCINPKVGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPL 183
+ + + L + ++ DDG+QH++L+RD+EI +V+G+ +GN++L+PLGPLREP+
Sbjct: 128 DPVRSQAVKALLEHGVNVIVTDDGLQHYALQRDIEIAVVDGVRRFGNQELIPLGPLREPV 187
Query: 184 MALKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPL 243
L D + + +++ N + L+ D + + G + L
Sbjct: 188 SRLDEVDFIITNGG--VAKANEIAMRLQPTD--------------AVNLKTGERCAVSKL 231
Query: 244 TAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEG 303
T +C ++ IG + F +L++L V+ F DH +F A + + ++ + L
Sbjct: 232 TRLC-----AMAGIGHPSRFFNTLRELNADLVHCQGFADHQAFDAAQLNQLAQQGDHL-- 284
Query: 304 KFNPKPIVVVTEKD 317
++TEKD
Sbjct: 285 --------IMTEKD 290
>sp|C4L8W2|LPXK_TOLAT Tetraacyldisaccharide 4'-kinase OS=Tolumonas auensis (strain DSM
9187 / TA4) GN=lpxK PE=3 SV=1
Length = 326
Score = 121 bits (304), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 150/317 (47%), Gaps = 54/317 (17%)
Query: 19 KLTPIQSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTP 78
KL +S L L + ++L+ + +R YR G FS +R PVPVI VGN+T GGNGKTP
Sbjct: 4 KLWYQRSWLNWLFAPFAALFALLTTMRRYAYRAGIFSSYRAPVPVIVVGNITVGGNGKTP 63
Query: 79 MVEFLAHCLADSEISPLILTRGYAGG---------DEVRMLERHLLERPAKIGKNC---- 125
MV +L L + P +++RGY G E E + P I + C
Sbjct: 64 MVLWLVELLTKAGYKPGVVSRGYGGKAPHYPYLLHPETTAAEAG--DEPVLIYQRCGCPV 121
Query: 126 -INPKVGSHLK----SGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLR 180
+ PK ++ + +I DDG+QH++L+RD+E V+++G GN L+P+GPLR
Sbjct: 122 AVAPKRAKAVQLLVEQCGVDVIICDDGLQHYALQRDIEFVVMDGERRLGNGWLMPMGPLR 181
Query: 181 EPLMALKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSK 240
E L++ +AVV + Q D +I+ SL R N +
Sbjct: 182 ETASRLRQV-MAVVCNGG----QARPD------EIQMSLQPAPLR------------NVR 218
Query: 241 IPLTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEE 300
TAV + V ++ IG F SL K G ++ + DH +F A E
Sbjct: 219 TNHTAVVSGAVDAMAGIGYPPRFFNSLLKQGYAVNQQVAYADHQAFNA----------AE 268
Query: 301 LEGKFNPKPIVVVTEKD 317
L +F +P+ ++TEKD
Sbjct: 269 LHQRFAQRPL-IMTEKD 284
>sp|A1RL20|LPXK_SHESW Tetraacyldisaccharide 4'-kinase OS=Shewanella sp. (strain W3-18-1)
GN=lpxK PE=3 SV=1
Length = 337
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 153/311 (49%), Gaps = 46/311 (14%)
Query: 4 LRRIVNEIAYAQDHAKLTPIQSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPV 63
++ +VN+I Y Q H P+Q L+PL S ++G F+R ++ G ++ LPVPV
Sbjct: 1 MQTLVNKIWY-QGH----PLQWLLLPL----SFVFGFITFVRRGLFQLGLKAQTILPVPV 51
Query: 64 ISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYAGG-DEVRMLERH-----LLER 117
I VGN+T GG+GKTPMV +L L +P +++RGY D V+ + + + +
Sbjct: 52 IVVGNITVGGSGKTPMVIYLIELLRAHGFNPGVISRGYGANIDGVKQVAYNASATDVGDE 111
Query: 118 PAKI-GKNCINPKVGSH--------LKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPW 168
PA I ++ + VGS + + +I DDG+QH++L RD+E+V+++G
Sbjct: 112 PAMIVARSGVPMVVGSKRVEAANVLIAEHGVDVIICDDGLQHYALGRDIELVVIDGQRRL 171
Query: 169 GNRKLLPLGPLREPLMALKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVP 228
GN LLP GPLRE LK D V++ + + F ++ P
Sbjct: 172 GNEYLLPAGPLREGPWRLKDVDFVVINGGN------------------ADVGQFEMQLAP 213
Query: 229 SYLFEVGNINSKIPLTAVCNAN-VLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQ 287
+ +V ++ I T + ++ ++ IG+ F SLQ G V F+DH ++
Sbjct: 214 T---QVKAVDGNIITTDFDKSQPLVAMAGIGNPTRFFDSLQAQGYQVVLSHGFDDHQAYD 270
Query: 288 ARDIEMIKKKL 298
+ + + K L
Sbjct: 271 KKQLCDLAKDL 281
>sp|A4Y5Q0|LPXK_SHEPC Tetraacyldisaccharide 4'-kinase OS=Shewanella putrefaciens (strain
CN-32 / ATCC BAA-453) GN=lpxK PE=3 SV=1
Length = 337
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 153/311 (49%), Gaps = 46/311 (14%)
Query: 4 LRRIVNEIAYAQDHAKLTPIQSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPV 63
++ +VN+I Y Q H P+Q L+PL S ++G F+R ++ G ++ LPVPV
Sbjct: 1 MQTLVNKIWY-QGH----PLQWLLLPL----SFVFGFITFVRRGLFQLGLKAQTILPVPV 51
Query: 64 ISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYAGG-DEVRMLERH-----LLER 117
I VGN+T GG+GKTPMV +L L +P +++RGY D V+ + + + +
Sbjct: 52 IVVGNITVGGSGKTPMVIYLIELLRAHGFNPGVISRGYGANIDGVKQVAYNASATDVGDE 111
Query: 118 PAKI-GKNCINPKVGSH--------LKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPW 168
PA I ++ + VGS + + +I DDG+QH++L RD+E+V+++G
Sbjct: 112 PAMIVARSGVPMVVGSKRVEAANVLIAEHGVDVIICDDGLQHYALGRDIELVVIDGQRRL 171
Query: 169 GNRKLLPLGPLREPLMALKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVP 228
GN LLP GPLRE LK D V++ + + F ++ P
Sbjct: 172 GNEYLLPAGPLREGPWRLKDVDFVVINGGN------------------ADVGQFEMQLAP 213
Query: 229 SYLFEVGNINSKIPLTAVCNAN-VLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQ 287
+ +V ++ I T + ++ ++ IG+ F SLQ G V F+DH ++
Sbjct: 214 T---QVKAVDGNIITTDFDKSQPLVAMAGIGNPTRFFDSLQAQGYQVVLSHGFDDHQAYD 270
Query: 288 ARDIEMIKKKL 298
+ + + K L
Sbjct: 271 KKQLCDLAKDL 281
>sp|Q9KQX0|LPXK_VIBCH Tetraacyldisaccharide 4'-kinase OS=Vibrio cholerae serotype O1
(strain ATCC 39315 / El Tor Inaba N16961) GN=lpxK PE=3
SV=1
Length = 336
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 148/314 (47%), Gaps = 52/314 (16%)
Query: 22 PIQSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVE 81
P+ L PLL S L+G+ R Y+ G +R P+PV+ VGN+T GGNGKTP+V
Sbjct: 12 PLGYLLWPLLWPFSVLFGVISRSRRKAYQTGDKPSYRAPLPVVVVGNITAGGNGKTPVVV 71
Query: 82 FLAHCLADSEISPLILTRGYAG------------------GDEVRMLERHLLERPAKIGK 123
+L L + P +++RGY GDE +++ A +
Sbjct: 72 WLVETLQNLGYRPGVVSRGYGAKAPSYPLVVNEQTPAQHCGDEPKLI---FQRTKAPVAV 128
Query: 124 NCINPKVGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPL 183
+ + + L + ++ DDG+QH++L+RD+EI +V+G+ +GN++L+PLGPLREP+
Sbjct: 129 DPVRSQAVKALLEHGVNVIVTDDGLQHYALQRDIEIAVVDGVRRFGNQELIPLGPLREPV 188
Query: 184 MALKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPL 243
L D + + +++ N + L+ D + + G + L
Sbjct: 189 SRLDEVDFIITNGG--VAKANEIAMRLQPTD--------------AVNLKTGERCAVSKL 232
Query: 244 TAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEG 303
T +C ++ IG + F +L++L V+ F DH +F A + + ++ L
Sbjct: 233 TRLC-----AMAGIGHPSRFFNTLRELNADLVHCQGFADHQAFDAAQLNQLAQQGAHL-- 285
Query: 304 KFNPKPIVVVTEKD 317
++TEKD
Sbjct: 286 --------IMTEKD 291
>sp|Q3A547|LPXK_PELCD Tetraacyldisaccharide 4'-kinase OS=Pelobacter carbinolicus (strain
DSM 2380 / Gra Bd 1) GN=lpxK PE=3 SV=1
Length = 357
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 153/339 (45%), Gaps = 49/339 (14%)
Query: 21 TPIQSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMV 80
+P++ + L LYG + LR FYR G+F + VPVISVGNL+ GG GKTP+V
Sbjct: 18 SPLEWLIFAFLLPLGWLYGAVMRLRALFYRIGWFDAYCADVPVISVGNLSVGGTGKTPVV 77
Query: 81 EFLAHCLADSEISPLILTRGYAG----------------------GDEVRMLERHLLERP 118
++L + +++RGYAG GDE +L R P
Sbjct: 78 DYLIRYCRSLDKRVAVVSRGYAGGKGAALRVVCAGQGPILDVQQAGDEPWLLAR---RNP 134
Query: 119 AKIGKNCINPKVGSHLKSGKIGA--VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPL 176
A I + G +GA V+LDDG QH ++ RD ++V+++ L P+GN ++LP
Sbjct: 135 AAIVIVAPHRAQGVRHAVENLGAEVVLLDDGFQHLAVSRDFDLVLLDALRPFGNGQVLPA 194
Query: 177 GPLREPLMALKRADIAVVHHA--DLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEV 234
G LREP+ AL+R D+ V+ DL ++ + R I + ++
Sbjct: 195 GLLREPVSALRRGDLFVLTRCPEDLAGTADVPGPVVHCRHILEESAVDLD---------- 244
Query: 235 GNINSKIPLTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMI 294
G + S L + + + I F + LQ G L F+DH ++ R ++
Sbjct: 245 GEVRS---LRELAGLRGIAFAGIAEPEGFFRELQSHGLTLTRTLHFSDHAAYDERAAILL 301
Query: 295 KKKLEELEGKFNPKPIVVVTEKDYDRDPEILMHLEAYKV 333
K + G + + TEKD + + + L ++V
Sbjct: 302 KDAAK--SGDY-----FITTEKDAVKLAHMTLPLPCFQV 333
>sp|Q5QU37|LPXK_IDILO Tetraacyldisaccharide 4'-kinase OS=Idiomarina loihiensis (strain
ATCC BAA-735 / DSM 15497 / L2-TR) GN=lpxK PE=3 SV=1
Length = 329
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 133/293 (45%), Gaps = 55/293 (18%)
Query: 44 LRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYA- 102
LR SFY G +++ VPVI VGN++ GG GKTPMV L+ L D +P I++RGY
Sbjct: 32 LRRSFYALGLMPRYKADVPVIVVGNISVGGTGKTPMVVALSQWLKDEGWNPGIISRGYGA 91
Query: 103 -GGDEVRMLERHLLERPAKIGKN------------CINPKVGSHLK-----SGKIGAVIL 144
G +LE + P K G I PK K K+ +I
Sbjct: 92 KGPFPYEVLES---DSPEKAGDEPLLMRRRTGCPVVIAPKRAQAAKLMAEQHPKVDVIIC 148
Query: 145 DDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLISEQN 204
DDG+QH++L+RD+E++M++ GN LLP GPLRE LK AD + ++ ++
Sbjct: 149 DDGLQHYALKRDIELIMIDAERGTGNGWLLPAGPLREGPWRLKGADWVISNYGRHAFARH 208
Query: 205 LKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSANAFV 264
+ D+E P + V N N ++ L N V+ IG F
Sbjct: 209 VVDVE------------------PGNWYRVDN-NEQVALKTESKFN--AVAGIGYPQRFF 247
Query: 265 QSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 317
SL + G N F DHH+F +D + NP +++TEKD
Sbjct: 248 NSLIEQGIELENSQSFADHHAFSQQDFSNLAS---------NP---ILMTEKD 288
>sp|Q8A6K1|LPXK_BACTN Tetraacyldisaccharide 4'-kinase OS=Bacteroides thetaiotaomicron
(strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 /
VPI-5482) GN=lpxK PE=3 SV=1
Length = 380
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 152/318 (47%), Gaps = 43/318 (13%)
Query: 35 SSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISP 94
S +YG + +R+ + +GF VPVI +GNL+ GG GKTP E+L L D+
Sbjct: 16 SWIYGAVVTVRNKLFDWGFLRSKSFGVPVICIGNLSVGGTGKTPHTEYLIKLLRDN-YHV 74
Query: 95 LILTRGY-----------------AGGDEVRMLERHLLERPAKIGKN-CINPKVGSHLKS 136
+L+RGY + GDE + + +N C + +K
Sbjct: 75 AVLSRGYKRHSRGYVLATPQSTARSIGDEPYQMHTKFPSVTLAVDENRCHGIEQLLSIKE 134
Query: 137 GKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHH 196
I V+LDD QH ++ L I++ + + + LLP G LRE + RA I +V
Sbjct: 135 PSIEVVLLDDAFQHRYVKPGLSILLTDYHRLFCDDTLLPAGRLRESVNGKNRAQIVIVTK 194
Query: 197 ADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNI-------NSKI-------P 242
Q++K I+ + I K L+++ + + F GN+ NS+I P
Sbjct: 195 C----PQDIKPIDYNI--ITKRLNLYPYQQLYFSSFRYGNLQPVFPSANSEIDSTVNELP 248
Query: 243 LTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELE 302
L+A+ N ++L V+ I S ++ L K+ ++ L F+DHH F RDI+ IK++ +L+
Sbjct: 249 LSALTNTDILLVTGIASPAPILEEL-KMYTDQIDSLSFDDHHHFSHRDIQQIKERFGKLK 307
Query: 303 GKFNPKPIVVVTEKDYDR 320
G+ ++V TEKD R
Sbjct: 308 GEHK---LIVTTEKDATR 322
>sp|A8FX59|LPXK_SHESH Tetraacyldisaccharide 4'-kinase OS=Shewanella sediminis (strain
HAW-EB3) GN=lpxK PE=3 SV=1
Length = 337
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 142/291 (48%), Gaps = 51/291 (17%)
Query: 44 LRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYAG 103
LR S ++ G + RLPVPVI VGN+T GG+GKTP V +L L P +++RGY
Sbjct: 46 LRRSLFKIGIKKQSRLPVPVIVVGNITVGGSGKTPTVIYLVELLRRHGYQPGVISRGYGV 105
Query: 104 GDE-VR-----MLERHLLERPAK----------IGKNCINPKVGSHLKSG-KIGAVILDD 146
E VR M R + + PA IG+N I+ G HL + + +I DD
Sbjct: 106 NFEGVRSVLPSMAARDVGDEPAMIVGRTGVPMVIGRNRID--AGEHLLTHFNVDVIISDD 163
Query: 147 GMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLISEQNLK 206
G+QH++L RD+E+++++G +GN LLP GPLRE L +K+ D VV+ I ++
Sbjct: 164 GLQHYALGRDIELLILDGDRRFGNGSLLPAGPLREGLWRVKKVDAVVVNGGQSIEGEHA- 222
Query: 207 DIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSANAFVQS 266
+VPS L V + N + P N V+ ++ IG+ F S
Sbjct: 223 -----------------MSLVPSALKPVTHSNEQPP---ALNDAVVAIAGIGNPQRFFTS 262
Query: 267 LQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 317
L G F DH ++ +++L EL G PI ++TEKD
Sbjct: 263 LINAGFNLNGVKAFEDHQAY-------CEEELTELCGDL---PI-IMTEKD 302
>sp|A1WWF8|LPXK_HALHL Tetraacyldisaccharide 4'-kinase OS=Halorhodospira halophila (strain
DSM 244 / SL1) GN=lpxK PE=3 SV=1
Length = 327
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 128/298 (42%), Gaps = 56/298 (18%)
Query: 38 YGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLIL 97
YG + LR Y+ G+ + PVPVI VGNL GG GKTP+V +L L + P I+
Sbjct: 24 YGAGVVLRRGLYQRGWLHRPASPVPVIVVGNLFVGGTGKTPLVAWLVTQLREYGWHPAIV 83
Query: 98 TRGYAG------------------GDEVRMLERHLLERPAKIGKNCINPKVGSHLKSGKI 139
RGY G GDE +L R P +G + P
Sbjct: 84 ARGYGGRAGKGPVAVTADSDPADSGDEPLLLARRCAV-PVFVGSD--RPATVQAAYQAGC 140
Query: 140 GAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADL 199
V+ DDG+QH+ +RRD EIV+++ GNR+LLP GPLREP+ L DI V + D
Sbjct: 141 DVVVSDDGLQHYRMRRDAEIVVLDAHRRLGNRRLLPAGPLREPIGRLAGVDIVAV-NGDA 199
Query: 200 ISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGS 259
+ E + +F + P V P V+ IG
Sbjct: 200 VPEGD---------------CVFH--LQPGAPRAVDGSQRPWP-----GGEAHAVAGIGH 237
Query: 260 ANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 317
F SLQ++G R F DHH++ ++D+ ++ +++TEKD
Sbjct: 238 PERFFASLQEVGIGVAERHVFPDHHAYSSQDLSFADER------------PIIMTEKD 283
>sp|Q6LPK7|LPXK_PHOPR Tetraacyldisaccharide 4'-kinase OS=Photobacterium profundum GN=lpxK
PE=3 SV=1
Length = 344
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 144/309 (46%), Gaps = 56/309 (18%)
Query: 29 PLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLA 88
P+ S L+G R + Y+ G +R PVPV+ VGN+T GGNGKTP+V +L L
Sbjct: 27 PVFWPLSKLFGFISVRRRNKYQTGEKVAYRAPVPVVVVGNITAGGNGKTPVVVWLVEQLQ 86
Query: 89 DSEISPLILTRGYAG------------------GDEVRMLERHLLERPAKIGKNCINPKV 130
+ P +++RGY G GDE ++ R A + + I
Sbjct: 87 AKGLKPGVVSRGYGGKAPHYPYLVEDKTSTDLVGDEPVLIRR---RTGAPVAVSPIRSDA 143
Query: 131 GSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRAD 190
L + +I DDG+QH++L RD+E V+++G +GN++LLPLGPLRE L D
Sbjct: 144 VMMLLEHDVDVIITDDGLQHYALARDIEFVVIDGQRRFGNQQLLPLGPLRETCDRLADVD 203
Query: 191 IAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCN-- 248
+ + +++N + L+ PS L IN K N
Sbjct: 204 FLICNGGK--AQKNEAPMHLQ----------------PSAL-----INVKTGERCSINEL 240
Query: 249 ANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPK 308
N++ ++ IG F ++L++LG V+ F DH +F +++ + ++ + L
Sbjct: 241 ENIVAMAGIGHPPRFFKTLEELGVTPVHCQPFTDHQAFSETELKHLAQQGQHL------- 293
Query: 309 PIVVVTEKD 317
V+TEKD
Sbjct: 294 ---VMTEKD 299
>sp|Q3J7R7|LPXK_NITOC Tetraacyldisaccharide 4'-kinase OS=Nitrosococcus oceani (strain
ATCC 19707 / NCIMB 11848) GN=lpxK PE=3 SV=1
Length = 338
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 140/308 (45%), Gaps = 57/308 (18%)
Query: 30 LLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLAD 89
LL+ S L+ +++ +R Y G F H LP+PV+ +GNLT GG GKTP+V +LA L
Sbjct: 21 LLTPLSGLFQLAVKIRQWAYTQGLFHTHILPLPVLVIGNLTLGGTGKTPLVIWLAQFLRQ 80
Query: 90 SEISPLILTRGYAG------------------GDEVRMLERHLLERPAKIGKNCINPKVG 131
P +++RGY G GDE +L R P +G + +
Sbjct: 81 HGYRPGLISRGYGGHAQNYPQQVYPDSDPHLVGDEAVLLARR-TGCPLVVGPDRV---AA 136
Query: 132 SH--LKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRA 189
SH L ++ DDG+QH++L RD+EI++V+G+ +GN LP GPLREPL L+
Sbjct: 137 SHALLAHSDCNVLLSDDGLQHYALGRDIEILVVDGVRRFGNAHCLPAGPLREPLSRLRTV 196
Query: 190 DIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNA 249
D+ V + E + + R IK G + PL
Sbjct: 197 DLVVTNGMPQGGEFAMYSQLQDARHIKD-----------------GTLR---PLKKFRRT 236
Query: 250 NVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKP 309
+ V+ IG+ F L+ L ++ F DH+ FQ+ D+ F +
Sbjct: 237 KLHGVAGIGNPERFFSQLRAL-ELTIQPHPFPDHYGFQSEDL------------AFADQQ 283
Query: 310 IVVVTEKD 317
V++TEKD
Sbjct: 284 PVLMTEKD 291
>sp|A4SL68|LPXK_AERS4 Tetraacyldisaccharide 4'-kinase OS=Aeromonas salmonicida (strain
A449) GN=lpxK PE=3 SV=1
Length = 331
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 146/317 (46%), Gaps = 74/317 (23%)
Query: 30 LLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLAD 89
LL+ + L+ I R YR G+ +R VPV+ VGN++ GGNGKTP+V +L L
Sbjct: 15 LLAPFALLFAILSGARRFAYRRGWCKAYRATVPVVVVGNISVGGNGKTPVVIWLVEQLQA 74
Query: 90 SEISPLILTRGYAG------------------GDEVRMLERHLLERPAKIGKNC---INP 128
P +++RGY G GDE ++ R C + P
Sbjct: 75 RGFRPGVVSRGYGGKAPHYPYRLDAASTTAQAGDEPVLIARR---------SGCPVVVAP 125
Query: 129 KVGSHLK----SGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLM 184
K ++ SG++ +I DDG+QH+ L RD+E+V+V+G+ +GN LLP+GPLREP+
Sbjct: 126 KRADAVRLLEQSGEVDIIITDDGLQHYGLARDIELVVVDGVRRFGNACLLPMGPLREPVT 185
Query: 185 ALKRADIAVVHHADLISEQN----LKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSK 240
LKR D + + + + + D+ +RD + +
Sbjct: 186 RLKRVDAIICNGGEPAKGEYAMRLVADVPRRVRD---------------------DAQAT 224
Query: 241 IPLTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEE 300
PL +A ++ IG F +L LG ++ + DHH+F RD E
Sbjct: 225 EPLPRAVDA----LAGIGHPPRFFATLAGLGYELHQQVGYGDHHAFD-RD---------E 270
Query: 301 LEGKFNPKPIVVVTEKD 317
L +F +P+ ++TEKD
Sbjct: 271 LVARFGQRPL-LMTEKD 286
>sp|B8F928|LPXK_DESAA Tetraacyldisaccharide 4'-kinase OS=Desulfatibacillum alkenivorans
(strain AK-01) GN=lpxK PE=3 SV=1
Length = 368
Score = 118 bits (296), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 141/322 (43%), Gaps = 48/322 (14%)
Query: 30 LLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLAD 89
+L L S +YG+ + LR+ Y+ GFF + P V+SVGN+T GG GKTPM +LA D
Sbjct: 26 VLRLVSLVYGLVMRLRYKLYQKGFFKTGKAPCMVVSVGNITVGGTGKTPMAIYLARLFND 85
Query: 90 SEISPLILTRGYAG----------------------GDEVRMLERHLLERPAKIGKNCIN 127
++ I +RGY G GDE ++ L P +G + +
Sbjct: 86 WGLNVAIASRGYGGTMQKQGGAASDGKDILLTPAEAGDEPWLMAVKLPGVPVVVGGDRVK 145
Query: 128 PKVGSHLKSGKIGA--VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMA 185
++L + + G +ILDD ++ RDL +++V+ P+GN + P G LREP
Sbjct: 146 S---ANLCASQFGTRILILDDAFSRLAIDRDLNLLLVDSQAPFGNGHVFPRGLLREPAEF 202
Query: 186 LKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVP----SYLFEVGNINSKI 241
RAD + AD + Q + + +F P Y + G KI
Sbjct: 203 ASRADAVIRTRADRGAGQAA---------LPQGKPVFSCTHKPKGFLEYFPQKGTSGPKI 253
Query: 242 ---PLTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKL 298
L + V + I F L LG ++RL F DHH++ RD +I +
Sbjct: 254 VRHSLDDLKGKKVAAFAGIADNQGFFDGLSSLGVAVLDRLSFPDHHAYTLRDRNIIVETA 313
Query: 299 EELEGKFNPKPIVVVTEKDYDR 320
+ + K ++ TEKD R
Sbjct: 314 IKADVK-----ALITTEKDLVR 330
>sp|B4ET31|LPXK_PROMH Tetraacyldisaccharide 4'-kinase OS=Proteus mirabilis (strain
HI4320) GN=lpxK PE=3 SV=1
Length = 333
Score = 117 bits (293), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 139/300 (46%), Gaps = 49/300 (16%)
Query: 35 SSLYG-ISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEIS 93
S LYG ISLF R + Y+ G+ S + PVPV+ VGNLT GGNGKTP+V +L L
Sbjct: 20 SWLYGAISLFRRFA-YKQGWLSSWKSPVPVVVVGNLTAGGNGKTPVVIWLVEQLKAQGFK 78
Query: 94 PLILTRGYAGGDEVRMLERHLLERPAKIGKNCI----------------NPKVGSHLKSG 137
P +++RGY G + L +PA G + + V + L
Sbjct: 79 PAVVSRGYGGKSDQYPLLLSPETQPAVAGDEPVLIYHRTGVPVAVAPSRSDAVKALLAQY 138
Query: 138 KIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHA 197
+ +I DDG+QH++L+RD EIV+++G +GN LP GP+RE L + +V+
Sbjct: 139 DLDIIITDDGLQHYALQRDYEIVVIDGQRRFGNGWWLPAGPMRERAHRLDSVNAVIVNGG 198
Query: 198 DLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAI 257
D + + +E E+ K+ K +T + NA + ++ I
Sbjct: 199 DCQANEIAMSLEGEIAVNLKT-------------------GEKKAITELGNA--VAMAGI 237
Query: 258 GSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 317
G F SLQ G + FNDH + ++++++ E L ++TEKD
Sbjct: 238 GHPPRFFNSLQDKGVKLIATKAFNDHSEYTLQELQILTPHQEPL----------IMTEKD 287
>sp|Q2IL55|LPXK_ANADE Tetraacyldisaccharide 4'-kinase OS=Anaeromyxobacter dehalogenans
(strain 2CP-C) GN=lpxK PE=3 SV=1
Length = 378
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 139/305 (45%), Gaps = 44/305 (14%)
Query: 49 YRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYAG----- 103
Y G R PV+S+GNL GG GKTP +A LA IL+RGY
Sbjct: 42 YDRGLLPAARAGAPVVSIGNLAVGGAGKTPAALAVAARLAGRGRRVAILSRGYGAARADA 101
Query: 104 ----------------GDEVRMLERHL-------LERPAKIGKNCINPKVGSHLKSGKIG 140
GDE +L R L R A++ + + +G+
Sbjct: 102 RVASDGAGALLPAAEAGDEPALLARRLPGVAVLCGPRRAELARTAVE-SLGAD------- 153
Query: 141 AVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLI 200
A++LDDG QH +L RDL++V+++ P+GN LLP GP REP AL+RA + + HAD
Sbjct: 154 ALVLDDGFQHRALARDLDVVVLDASNPFGNGHLLPRGPNREPPSALRRAGLVWLSHADRA 213
Query: 201 SEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSA 260
+ + L+ + RD + +R P+ L + G + L A+ V +S +
Sbjct: 214 APERLEALRALARDATGRAPV-ESRHAPTALLD-GALREAGALEALRGRRVAALSGLARP 271
Query: 261 NAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKDYDR 320
F+++L+ LG F DHH F A +++ + + E + VV TEKD R
Sbjct: 272 AGFLRTLEALGAEVALARAFPDHHRFTAGELDAVLR-----EAAASGCAWVVTTEKDAVR 326
Query: 321 -DPEI 324
DP +
Sbjct: 327 LDPAL 331
>sp|A1K5I2|LPXK_AZOSB Tetraacyldisaccharide 4'-kinase OS=Azoarcus sp. (strain BH72)
GN=lpxK PE=3 SV=1
Length = 341
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 128/273 (46%), Gaps = 32/273 (11%)
Query: 38 YGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLIL 97
+G+ LR YR G S+ RLPV VI VGN+ GG+GKTP+V +L L + P I+
Sbjct: 32 FGLLAALRRRLYRAGLLSQVRLPVKVIVVGNIAVGGSGKTPVVAWLVEQLRAAGWHPGII 91
Query: 98 TRGYAG-----------------GDEVRMLERHLLERPAKIGKNCINPKVGSHLKSGKIG 140
+RG+ G GDE +L R L P +G++ +
Sbjct: 92 SRGHGGSARGVLEVVASGDAGVCGDEPLLLAR-LTGVPVFVGRDRPAAAAALLQAHPECD 150
Query: 141 AVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLI 200
++ DDGMQH+ L RDLE+ +V+ GNR LLP GPLREP+ L R D+ V+ H D
Sbjct: 151 VIVSDDGMQHYRLARDLELAVVDPAT-LGNRWLLPAGPLREPVGRLDRVDL-VIRHGD-- 206
Query: 201 SEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSA 260
+ EL R +++ + R+V V + + +A V V+ IG
Sbjct: 207 ------EGELPPRLGARAVPM---RLVGDGFRGVADPARRCEASAFRGRRVHAVAGIGRP 257
Query: 261 NAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEM 293
F L +G V F DHH F A D++
Sbjct: 258 QRFFDQLAAMG-LDVVPHPFPDHHRFVAADLDF 289
>sp|Q8KBV6|LPXK_CHLTE Tetraacyldisaccharide 4'-kinase OS=Chlorobium tepidum (strain ATCC
49652 / DSM 12025 / TLS) GN=lpxK PE=3 SV=2
Length = 350
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 163/367 (44%), Gaps = 61/367 (16%)
Query: 30 LLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLAD 89
LL A++LYG+ + LR+ Y G F P+PV+SVGN+T GG GKTP+V+++
Sbjct: 9 LLRPAAALYGMVMSLRNCLYDQGIFKSWHSPIPVVSVGNITTGGTGKTPLVDWIVKFYEA 68
Query: 90 SEISPLILTRGYA---------------------GGDEVRMLERHLLERPAKI----GKN 124
S I+ I++RGY GDE ML P I K
Sbjct: 69 SGIATAIVSRGYGRRTKGVQLVSDGGRLLLGSRDAGDETAMLA---ARNPRTIVVVAEKR 125
Query: 125 CINPKVGSHLKSGKI-GAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPL 183
+ H + ++ G ++LDD QH + RDL+IV+VN P +LP G LREPL
Sbjct: 126 VEGVQFLMHQFADRLPGVIVLDDAFQHRKIARDLDIVVVNAGAPEEIDAMLPAGRLREPL 185
Query: 184 MALKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPL 243
L+RA + ++ + + N + +R+ K + +++ P L V ++
Sbjct: 186 RGLRRAHLIIL--GKITDDANSATLLQTLRETGK--PVIRSKIKPGKLIHVDGSENE--- 238
Query: 244 TAVCNANV--LCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMI--KKKLE 299
N +V L + IG+ F+ SL+ G F DH + I I + K +
Sbjct: 239 ---TNESVKTLAFAGIGAPEGFLHSLKTAGIKIAATKFFRDHEPYTESAIRSIIGEAKRQ 295
Query: 300 ELEGKFNPKPIVVVTEKDYDR---DPEILMHLEAYKVLVLCSKLQIIPCRGCTEDSFKLL 356
L + V TEKD+ R +PE+ L V C L I P D + L
Sbjct: 296 GL--------VPVTTEKDWFRIADEPELAEMLRQ----VGCRYLTITP---EFPDGTQEL 340
Query: 357 LKELVDV 363
++L+DV
Sbjct: 341 ERQLLDV 347
>sp|Q1LR05|LPXK_RALME Tetraacyldisaccharide 4'-kinase OS=Ralstonia metallidurans (strain
CH34 / ATCC 43123 / DSM 2839) GN=lpxK PE=3 SV=1
Length = 372
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 139/303 (45%), Gaps = 49/303 (16%)
Query: 35 SSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISP 94
S L+G+ +R Y+ G+F RLP+PVI VGN+T GG GKTP V LAH LA++ + P
Sbjct: 30 SLLFGLIARIRRYGYQQGWFKSTRLPMPVIVVGNVTVGGTGKTPAVIALAHALAEAGLRP 89
Query: 95 LILTRGYA-----------------GGDEVRMLERHLLERPAKIGKN---CINPKVGSHL 134
+++RGY GDE ++ R + P + + C + SH
Sbjct: 90 GVVSRGYGVKLNHPRRVKPTSKAADVGDEPLLIAR-AADVPVWVFPDRALCTQAMLVSH- 147
Query: 135 KSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVV 194
+ ++LDDG+QH+ L+RD EIVM + M GN +LP GPLREPL +
Sbjct: 148 --PGVNVLLLDDGLQHYKLQRDFEIVMFDTRMG-GNGMMLPAGPLREPLTRPR------- 197
Query: 195 HHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCV 254
A LI++ N R ++ R+ +++ + ++ + VL
Sbjct: 198 -DATLINDPNF-------RATPDKPDVYGMRLELDEAWQLNDPTMSCDVSKFADKRVLAA 249
Query: 255 SAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVT 314
+ IG F SL++ G S L DH+ F LE ++++T
Sbjct: 250 AGIGHPERFFASLRQAG-LSPATLPLPDHYDFVQDPFADNPAALE--------ADVILIT 300
Query: 315 EKD 317
EKD
Sbjct: 301 EKD 303
>sp|A8H3F7|LPXK_SHEPA Tetraacyldisaccharide 4'-kinase OS=Shewanella pealeana (strain ATCC
700345 / ANG-SQ1) GN=lpxK PE=3 SV=1
Length = 330
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 145/301 (48%), Gaps = 49/301 (16%)
Query: 4 LRRIVNEIAYAQDHAKLTPIQSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPV 63
++ VN++ Y Q H P++ +L PL + L+G +LR + G +LPVPV
Sbjct: 1 MQSWVNKLWY-QSH----PLRFALWPL----TLLFGAVSWLRRLLFSLGLKKATKLPVPV 51
Query: 64 ISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYAGGDEVRMLERHLLE-RPAKIG 122
I VGN+T GG+GKTP V +L L P +++RGY G E+ + L E +PA +G
Sbjct: 52 IIVGNITVGGSGKTPTVIYLIELLRSHGFKPGVISRGY--GVEIEGVRSVLPEDKPASVG 109
Query: 123 --------KNCINPKVGSH--------LKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLM 166
+ + VG+ L + +I DDG+QH+ L RD+E+++++G
Sbjct: 110 DEPAMIVSRTAVPMVVGAKRVDAAKHLLAEFDVDIIISDDGLQHYQLARDIELIILDGER 169
Query: 167 PWGNRKLLPLGPLREPLMALKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRM 226
GN LLP GPLRE LK D +V+ I++ + + LE
Sbjct: 170 RLGNGMLLPAGPLREAAWRLKSVDQVIVNGG--IAQSGEQAMLLE--------------- 212
Query: 227 VPSYLFEVGNI-NSKIPLTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHS 285
PS V + N +P + + ++ ++ IG+ F +LQ LG C F+DH +
Sbjct: 213 -PSKWLPVSPVHNGSLPPSQ--SQPLVAMAGIGNPQRFFDTLQALGYCVEQAQAFDDHSA 269
Query: 286 F 286
+
Sbjct: 270 Y 270
>sp|Q3B2C2|LPXK_PELLD Tetraacyldisaccharide 4'-kinase OS=Pelodictyon luteolum (strain DSM
273) GN=lpxK PE=3 SV=1
Length = 355
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 159/362 (43%), Gaps = 47/362 (12%)
Query: 30 LLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLAD 89
LL A+ LYG+ +R++ + G + P+PV+S+GNLT GG GKTP+V+++
Sbjct: 9 LLRPAALLYGLVAAVRNALFDRGMLKAWKSPIPVVSIGNLTAGGTGKTPLVDWVLKYYLS 68
Query: 90 SEISPLILTRGYA---------------------GGDEVRMLERHLLERPAKIGKNCINP 128
P +++RGY GDE ML + E + +
Sbjct: 69 IGCRPAVVSRGYGRRSKGVQLVSDGRNILLGSTRSGDETAMLAANNPEAVVVVAEQRSEG 128
Query: 129 K--VGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMAL 186
+ + + +ILDD QH L RDL+IV++N P+ K+LP G LREP +
Sbjct: 129 VQFIMERFRGERPDVIILDDAFQHRQLARDLDIVVINSREPFAAAKMLPEGRLREPKSGI 188
Query: 187 KRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFF-TRMVPSYLFEVG-NINSKIPLT 244
RAD+AV+ + + E IE E+ S+++ TR+V L G S P
Sbjct: 189 GRADVAVL--SKITDESKADAIEAEL---TGSVALVARTRVVIGELSPFGPKGRSTAPHP 243
Query: 245 AVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGK 304
L + I S +FV+SL K G V + F DH + + L +E
Sbjct: 244 DPAGLKALAFAGIASPASFVESLMKKGVHVVEQRFFRDHEPYTLNNF------LPLVEEA 297
Query: 305 FNPKPIVVVTEKDYDR---DPEILMHLEAYKVLVLCSKLQIIPCRGCTEDSFKL--LLKE 359
+V TEKD R +P +L E V C L I G T + KL +LK
Sbjct: 298 RRKGLTLVTTEKDRYRLEGEPGLLEKTEG----VGCCCLNI--ATGFTRGAEKLQEMLKA 351
Query: 360 LV 361
+V
Sbjct: 352 VV 353
>sp|A0KYE1|LPXK_SHESA Tetraacyldisaccharide 4'-kinase OS=Shewanella sp. (strain ANA-3)
GN=lpxK PE=3 SV=1
Length = 335
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 138/300 (46%), Gaps = 49/300 (16%)
Query: 4 LRRIVNEIAYAQDHAKLTPIQSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPV 63
++ +VN+I Y + H P++ L+P S L+ + +R S +R G S+ LPVPV
Sbjct: 1 MQALVNKIWY-EGH----PLRWLLLPF----SVLFALITAIRRSLFRLGLKSQTALPVPV 51
Query: 64 ISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYAG-----------------GDE 106
I VGN+T GG+GKTP V +L L +P +++RGY GDE
Sbjct: 52 IVVGNITVGGSGKTPTVIYLIELLRQHGFNPGVISRGYGADIQGVKVVTAVDSAAAVGDE 111
Query: 107 VRMLERHLLERPAKIGKNCINPKVGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLM 166
M+ P +G ++ + L + +I DDG+QH++L RD+E+V+++G
Sbjct: 112 PAMIVAR-TSVPMVVGAKRVD-TAKALLAEFAVDVIICDDGLQHYALGRDIELVVIDGKR 169
Query: 167 PWGNRKLLPLGPLREPLMALKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRM 226
GNR LLP GPLRE L + D VV+ + Q F ++
Sbjct: 170 GLGNRHLLPAGPLREGAWRLNQVDFVVVNGGPAQANQ------------------FEMQL 211
Query: 227 VPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSF 286
PS + V N K V+ ++ IG F ++L + G F+DH ++
Sbjct: 212 SPSAVLPV---NPKAEAVFNPTQPVVAMAGIGHPARFFETLTQQGIQLALSHGFDDHQAY 268
>sp|Q492T0|LPXK_BLOPB Tetraacyldisaccharide 4'-kinase OS=Blochmannia pennsylvanicus
(strain BPEN) GN=lpxK PE=3 SV=1
Length = 337
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 151/315 (47%), Gaps = 54/315 (17%)
Query: 24 QSSLIPLLSLA-SSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEF 82
+SS L L S LYG+ L Y++G+ +R VP+I +GNLT GGNGKTPMV +
Sbjct: 8 KSSFFYLFLLPFSWLYGVISTLNRISYQYGWRKVYRFSVPIIIIGNLTIGGNGKTPMVLW 67
Query: 83 LAHCLADSEISPLILTRGYAGGDE----VRMLERHLLE---RPAKIGKN-----CINPK- 129
L L +++RGY G + + H E P I K ++PK
Sbjct: 68 LVEHLKRRGWKVGVISRGYKGKSNNYPIIINMNSHSEECGDEPMLIWKRTGVSVAVSPKR 127
Query: 130 ---VGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMAL 186
V + L+ ++ +I DDG+QH++L RD+E V+VN ++ +GN LP GP+RE + L
Sbjct: 128 ADAVAALLRKQELDIIISDDGLQHYALFRDIEWVIVNSVLRFGNGCWLPAGPMRERINRL 187
Query: 187 KRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNIN----SKIP 242
A++ + SE ++ E+ M+ LF + +N + P
Sbjct: 188 HTVQ-AIIANG---SEVGIQSGEVLMQ-----------------LFPIAVVNILTGERKP 226
Query: 243 LTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELE 302
L + NV+ ++ IG F +L+ G + + F+DHH + + + + KK E
Sbjct: 227 LYFL--NNVVAIAGIGYPTQFFDTLRSYGIIPIRSISFSDHHVYSEKMLTSLTKKDE--- 281
Query: 303 GKFNPKPIVVVTEKD 317
I+++TEKD
Sbjct: 282 -------ILLMTEKD 289
>sp|Q6MMX4|LPXK_BDEBA Tetraacyldisaccharide 4'-kinase OS=Bdellovibrio bacteriovorus
(strain ATCC 15356 / DSM 50701 / NCIB 9529 / HD100)
GN=lpxK PE=3 SV=1
Length = 339
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 139/303 (45%), Gaps = 31/303 (10%)
Query: 35 SSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISP 94
S LY + ++++ Y G F + PVPV+S+GNLT GG GKTP+ +F L
Sbjct: 9 SFLYDQVVGVKNNLYDRGVFGVFKAPVPVVSIGNLTVGGTGKTPITDFCLKSLVADGKKV 68
Query: 95 LILTRGYAGGDEVRML--------ERHLLERPAKIGKNCINPKVGSHL------------ 134
+++R Y L R+ + P + + NP+V ++
Sbjct: 69 AVISRSYRADASAPCLVDVDHPFAARYFGDEPVLLAQ--ANPQVSVYVGPSKWRTARYAV 126
Query: 135 KSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVV 194
+ K +I+DDG QH L RDL IV+++ N ++LP G RE ++RAD+ ++
Sbjct: 127 EKHKYDLLIVDDGFQHRRLHRDLNIVILDATESLSNYEVLPEGRARESWAGIERADVLIL 186
Query: 195 HHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCV 254
+L E LK +E + K+ L F + + G + + L + V
Sbjct: 187 SKCNLAPEDELKALEARLPKNKEVL-YFGYEIQQCQNVKTGQVLHRDELKG---KKLFLV 242
Query: 255 SAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVT 314
SAI + F + ++++G S L F DHH + A D++ I+ ++ + + +V T
Sbjct: 243 SAIARPDVFEKMMREIGEVSNQSLHFRDHHQYTADDVKNIENAFKKSQADY-----LVTT 297
Query: 315 EKD 317
KD
Sbjct: 298 GKD 300
>sp|A6L0S5|LPXK_BACV8 Tetraacyldisaccharide 4'-kinase OS=Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154) GN=lpxK PE=3 SV=1
Length = 366
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 151/308 (49%), Gaps = 33/308 (10%)
Query: 34 ASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLA-DSEI 92
S +YG ++LR+ + +G + + + +PVISVGN+T GG GKTP E+L L D ++
Sbjct: 15 VSWIYGTGVWLRNKLFDWGIYKERKFDIPVISVGNITVGGTGKTPHTEYLIRLLQKDYKV 74
Query: 93 SPLILTRGYAG-----------------GDEVRMLERHLLERPAKIGKN-C--INPKVGS 132
+ +L+RGY GDE +++ + + ++ C I S
Sbjct: 75 A--VLSRGYKRKSKGFVLARPDTSVQMIGDEPFQMKQKFPDIHMAVDRDRCHGIEQLCNS 132
Query: 133 HLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIA 192
H+ G +ILDD QH ++ + I++V+ LLP G +REP RA I
Sbjct: 133 HIAPG-TEVIILDDAFQHRYVKPGINILLVDYHRLICEDTLLPAGRMREPENGKSRAHIV 191
Query: 193 VVHHA-DLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAV-CNAN 250
+V I+ +L+ + +M ++ ++FT + L + + + L + + +
Sbjct: 192 IVTKCPKDITPMDLRVLSKQM-ELYPYQQLYFTTLTYGKLHPLFTAGNAVSLKEIEKDKH 250
Query: 251 VLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEEL-EGKFNPKP 309
+L V+ I S +Q L + L F+DHH F ARD+E+IKK+ +L EG K
Sbjct: 251 ILLVTGIASPAKLIQDLSPYNE-HIESLAFSDHHDFTARDMELIKKRFMKLPEG----KR 305
Query: 310 IVVVTEKD 317
+++ TEKD
Sbjct: 306 MIITTEKD 313
>sp|B8JE66|LPXK_ANAD2 Tetraacyldisaccharide 4'-kinase OS=Anaeromyxobacter dehalogenans
(strain 2CP-1 / ATCC BAA-258) GN=lpxK PE=3 SV=1
Length = 379
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 137/303 (45%), Gaps = 44/303 (14%)
Query: 49 YRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYAG----- 103
Y G R PV+S+GNL GG GKTP +A LA IL+RGY
Sbjct: 42 YDRGVLPAVRAGAPVVSIGNLAVGGAGKTPAALAVAARLAGRGRRVAILSRGYGAARADA 101
Query: 104 ----------------GDEVRMLERHL-------LERPAKIGKNCINPKVGSHLKSGKIG 140
GDE +L R L R A++ + + +G+
Sbjct: 102 RVASDGAGALLPAAEAGDEPALLARRLPGVAVLCGPRRAELARTAVE-ALGAD------- 153
Query: 141 AVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLI 200
A++LDDG QH +L RDL++V+++ P+GN LLP GP REP AL+RA + + HAD
Sbjct: 154 ALVLDDGFQHRALARDLDVVVLDASNPFGNGHLLPRGPNREPRTALRRAGLVWLSHADRA 213
Query: 201 SEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSA 260
+ + L+ + RD + +R + L + G + L A+ V +S +
Sbjct: 214 APERLEALRALARDATGRAPV-ESRHAATALLD-GALREAGSLEALRGRRVAALSGLARP 271
Query: 261 NAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKDYDR 320
F+++L+ LG F DHH F A ++E + + +G VV TEKD R
Sbjct: 272 AGFLRTLEALGAEVALARAFPDHHRFTAGELEAVLR-----DGDAAGCAWVVTTEKDAVR 326
Query: 321 -DP 322
DP
Sbjct: 327 LDP 329
>sp|Q475F8|LPXK_CUPPJ Tetraacyldisaccharide 4'-kinase OS=Cupriavidus pinatubonensis
(strain JMP134 / LMG 1197) GN=lpxK PE=3 SV=1
Length = 366
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 140/303 (46%), Gaps = 49/303 (16%)
Query: 35 SSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISP 94
S L+G+ +R Y G+F RLP+PVI VGN+T GG GKTP V LA L ++ + P
Sbjct: 30 SLLFGLIARVRRYGYLHGWFKSTRLPMPVIVVGNVTVGGTGKTPAVIALAQALTEAGLRP 89
Query: 95 LILTRGYA-----------------GGDEVRMLERHLLERPAKIGKN---CINPKVGSHL 134
+++RGY GDE ++ R + P + + C + SH
Sbjct: 90 GVVSRGYGVTLKHPRRVKPTSKASDVGDEPLLIARA-ADVPVWVFPDRALCAQTMLVSHP 148
Query: 135 KSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVV 194
+ ++LDDG+QH+ L+RD EIVM + M GN +LP GPLREPL +
Sbjct: 149 ---GVNVLLLDDGLQHYRLQRDFEIVMFDSRM-GGNGLMLPAGPLREPLSRPR------- 197
Query: 195 HHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCV 254
A LI++ N R + ++ R+ +++ + P++A VL
Sbjct: 198 -DATLINDPNF-------RATPERPDVYGMRLDLDEAWQLNDPTMARPVSAFAGRRVLAA 249
Query: 255 SAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVT 314
+ IG+ F SL+ G S L DH+ F + + L+ ++++T
Sbjct: 250 AGIGNPERFFASLRGAG-LSPKTLPLPDHYDFAE---DPFAGNPDALDAD-----VILIT 300
Query: 315 EKD 317
EKD
Sbjct: 301 EKD 303
>sp|B4UHQ4|LPXK_ANASK Tetraacyldisaccharide 4'-kinase OS=Anaeromyxobacter sp. (strain K)
GN=lpxK PE=3 SV=1
Length = 378
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 134/297 (45%), Gaps = 43/297 (14%)
Query: 49 YRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYAG----- 103
Y G R PV+S+GNL GG GKTP +A LA IL+RGY
Sbjct: 42 YDRGVLPAVRAGAPVVSIGNLAVGGAGKTPAALAVAARLAGRGRRVAILSRGYGAARADA 101
Query: 104 ----------------GDEVRMLERHL-------LERPAKIGKNCINPKVGSHLKSGKIG 140
GDE +L R L R A++ + + +G+
Sbjct: 102 RVASDGAGALLPAAEAGDEPALLARRLPGVAVLCGPRRAELARTAVE-ALGAD------- 153
Query: 141 AVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLI 200
A++LDDG QH +L RDL++V+++ P+GN LLP GP REP AL+RA + + HAD
Sbjct: 154 ALVLDDGFQHRALARDLDVVVLDASNPFGNGHLLPRGPNREPRTALRRAGLVWLSHADRA 213
Query: 201 SEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSA 260
+ + L+ + RD + +R P+ L + G + L A+ V +S +
Sbjct: 214 APERLEALRRLARDATGRAPV-ESRHAPTALLD-GALREAGSLEALRGRRVAALSGLARP 271
Query: 261 NAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 317
F+++L+ LG F DHH F ++E + + + + VV TEKD
Sbjct: 272 AGFLRTLEALGAEVALARAFPDHHRFTGGELEAVLRDADAAGCAW-----VVTTEKD 323
>sp|Q6ALV8|LPXK_DESPS Tetraacyldisaccharide 4'-kinase OS=Desulfotalea psychrophila
(strain LSv54 / DSM 12343) GN=lpxK PE=3 SV=1
Length = 348
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 136/309 (44%), Gaps = 40/309 (12%)
Query: 35 SSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISP 94
SSLY + LR YR G F +H PVPVISVGNLT GG GKTP+ ++A L + + P
Sbjct: 15 SSLYAGIMKLRCLLYRRGLFRQHHFPVPVISVGNLTMGGTGKTPVTHYIAKLLLEHGLQP 74
Query: 95 LILTRGYAG----------------------GDEVRMLERHLLERPAKIGKN-CINPKVG 131
I++RGY+G GDE ML L GK ++ K
Sbjct: 75 AIISRGYSGKSGGEVNIVSDGQRILLSAEQAGDEPYMLASMLAGVIVITGKKRYLSCKYA 134
Query: 132 SHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRAD- 190
++ +ILDDG QH ++ R+L++V+ + GN ++ P G LRE AL RAD
Sbjct: 135 VEKMQAEV--IILDDGFQHLAVARNLDLVLFDAQTGMGNNRVFPGGDLREARFALDRADA 192
Query: 191 IAVVHHADLISEQNLKDIELEMRDIKKS--LSIFFTRMVPSYLFEVGNINSKIPLTAVCN 248
+ E+ L ++ + S++ T V Y + + + +P
Sbjct: 193 FLITGKCPREEEELLAIELELQHELPQCPLFSVYRTEGV-FYSAKQEKVVTHLP------ 245
Query: 249 ANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPK 308
V I + F L+K G V F+DH + + IE I K E K
Sbjct: 246 KKVFAFCGIANPERFHHDLEKQGFSLVGFKAFSDHQQYTGQCIEEIVK-----EAKKGGA 300
Query: 309 PIVVVTEKD 317
++ T+KD
Sbjct: 301 QAIITTDKD 309
>sp|Q1GZI1|LPXK_METFK Tetraacyldisaccharide 4'-kinase OS=Methylobacillus flagellatus
(strain KT / ATCC 51484 / DSM 6875) GN=lpxK PE=3 SV=1
Length = 335
Score = 112 bits (280), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 55/284 (19%)
Query: 54 FSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYAG---------- 103
F +L VPVI VGN+ GG GKTP V +L L + P I++RGY G
Sbjct: 46 FKSLKLSVPVIIVGNINVGGTGKTPFVIWLVQQLRQNGWYPGIISRGYGGKSIHTHQVTK 105
Query: 104 -------GDE-VRMLERHLLERPAKIGKNCINPKVGSHL--KSGKIGAVILDDGMQHWSL 153
GDE V +++R L P +G+ + HL + +I DDG+QH++L
Sbjct: 106 DSLPQEVGDEPVLLVQRTGL--PLYVGRK--RTRAARHLLRDYPECNLIISDDGLQHYAL 161
Query: 154 RRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLISEQNLKDIELEMR 213
RD+EIV+++G +GN +LLP GPLREP L+ D V +
Sbjct: 162 ERDMEIVIIDGERIFGNGQLLPAGPLREPSSRLEDVDAVVFNGG---------------- 205
Query: 214 DIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSANAFVQSLQKLGPC 273
+ + +++P L +V ++ L + +V V+ IG+ F L++LG
Sbjct: 206 --PPAAGGYLMQLIPEDLRKVSAPQERMALNELIGQHVHAVAGIGNPQRFFGQLEQLG-L 262
Query: 274 SVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 317
V F DHH++ D E K IV++TEKD
Sbjct: 263 VVEAHPFPDHHAYTEDDFEFAKDD------------IVLMTEKD 294
>sp|B3EG23|LPXK_CHLL2 Tetraacyldisaccharide 4'-kinase OS=Chlorobium limicola (strain DSM
245 / NBRC 103803) GN=lpxK PE=3 SV=1
Length = 350
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 160/357 (44%), Gaps = 67/357 (18%)
Query: 23 IQSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEF 82
+ + L PLL A++LY + +R+ + F + P+PV+S+GN++ GG GKTP+ ++
Sbjct: 1 MSNPLSPLLKPAAALYRTVVRMRNLGFEKKLFKTWKAPLPVVSIGNISAGGTGKTPLADW 60
Query: 83 LA-HCLADSEISPLILTRGYA---------------------GGDEVRMLERH------L 114
+ +CL+ P +L+RGY GDE ML +
Sbjct: 61 IINYCLSVGS-EPALLSRGYGRTTKGVQLVSDGQRILLDSREAGDETSMLAARNPGIIVV 119
Query: 115 LERPAKIGKNCINPKVGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLL 174
+ K G I + G+ + S +ILDD QH + RDL+IV++N P+ N ++L
Sbjct: 120 VAEKRKEGVEFILKRFGTRMPS----LIILDDAFQHRQIARDLDIVIINAAEPYCNARML 175
Query: 175 PLGPLREPLMALKRADIAVVHHADLISEQNLKD-IELEMRDIKKSLSIFFTRMVPSYLFE 233
P G LREPL ++RA + V++ I+++N D I +++ K + + + L
Sbjct: 176 PEGRLREPLGNIRRAGLIVLNK---ITDRNAADAIACDLK--KTGIPVVLAKTEAGELVP 230
Query: 234 VGNINSKIPLTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARD--- 290
G + + + + IGS F+ SL++ G F DH +
Sbjct: 231 FGEDAGERNMNGI---RAFAFAGIGSPEGFLGSLKEKGIQVEAHRFFRDHEPYSGDKLLP 287
Query: 291 --IEMIKKKLEELEGKFNPKPIVVVTEKDYDRDPEILMHLEAYKVLVLCSKLQIIPC 345
+E KK L +V TEKDY R +L E L + L ++PC
Sbjct: 288 ILLEAEKKGLS-----------LVTTEKDYFR---LLGEHE------LTATLSVLPC 324
>sp|Q0HTS9|LPXK_SHESR Tetraacyldisaccharide 4'-kinase OS=Shewanella sp. (strain MR-7)
GN=lpxK PE=3 SV=1
Length = 335
Score = 112 bits (279), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 60/331 (18%)
Query: 4 LRRIVNEIAYAQDHAKLTPIQSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPV 63
++ +VN+I Y + H P++ L+P S L+ + +R S +R G S+ LPVPV
Sbjct: 1 MQVLVNKIWY-EGH----PLRWLLLPF----SVLFALITAIRRSLFRLGLKSQTPLPVPV 51
Query: 64 ISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYAG-----------------GDE 106
I VGN+T GG+GKTP V +L L +P +++RGY GDE
Sbjct: 52 IVVGNITVGGSGKTPTVIYLIELLRQQGFNPGVISRGYGADIQGVKVVTAADSAASVGDE 111
Query: 107 VRMLERHLLERPAKIGKNCINPKVGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLM 166
M+ P +G ++ + L + +I DDG+QH++L RD+E+V+++G
Sbjct: 112 PAMIVAR-TGVPMVVGAKRVD-TAKALLAQFAVDVIICDDGLQHYALGRDIELVVIDGKR 169
Query: 167 PWGNRKLLPLGPLREPLMALKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRM 226
GNR LLP GPLRE L + D VV+ ++ N +++L
Sbjct: 170 GLGNRHLLPAGPLREGAWRLNQVDFVVVNGGP--AQANQYEMQLS--------------- 212
Query: 227 VPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSF 286
PS + V N K V+ ++ IG F ++L + G F+DH ++
Sbjct: 213 -PSAVLPV---NPKAVAVFDPTQPVVAMAGIGHPARFFETLTQQGFQLALSHGFDDHQAY 268
Query: 287 QARDIEMIKKKLEELEGKFNPKPIVVVTEKD 317
K+ L EL +P+ ++TEKD
Sbjct: 269 D-------KEVLCELAAS---RPL-MMTEKD 288
>sp|Q0HHH5|LPXK_SHESM Tetraacyldisaccharide 4'-kinase OS=Shewanella sp. (strain MR-4)
GN=lpxK PE=3 SV=1
Length = 335
Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 154/331 (46%), Gaps = 60/331 (18%)
Query: 4 LRRIVNEIAYAQDHAKLTPIQSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPV 63
++ +VN+I Y + H P++ L+P S L+ + +R S +R G S+ LPVPV
Sbjct: 1 MQVLVNKIWY-EGH----PLRWLLLPF----SVLFALITAIRRSLFRLGLKSQTPLPVPV 51
Query: 64 ISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYAG-----------------GDE 106
I VGN+T GG+GKTP V +L L +P +++RGY GDE
Sbjct: 52 IVVGNITVGGSGKTPTVIYLIELLRQQGFNPGVISRGYGADMQGVKVVTAADSAASVGDE 111
Query: 107 VRMLERHLLERPAKIGKNCINPKVGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLM 166
M+ P +G ++ + L + +I DDG+QH++L RD+E+V+++G
Sbjct: 112 PAMIVAR-TGVPMVVGAKRVD-TAKALLAQFAVDVIICDDGLQHYALGRDIELVVIDGKR 169
Query: 167 PWGNRKLLPLGPLREPLMALKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRM 226
GNR LLP GPLRE L + D VV+ ++ N +++L
Sbjct: 170 GLGNRHLLPAGPLREGAWRLNQVDFVVVNGGP--AQANQYEMQLS--------------- 212
Query: 227 VPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSF 286
PS + V N K V+ ++ IG F ++L + G F+DH ++
Sbjct: 213 -PSAVLPV---NPKAVAVFDPTQPVVAMAGIGHPARFFETLTQQGFQLALSHGFDDHQAY 268
Query: 287 QARDIEMIKKKLEELEGKFNPKPIVVVTEKD 317
K+ L EL +P+ ++TEKD
Sbjct: 269 D-------KEVLCELAAS---RPL-MMTEKD 288
>sp|A9ND59|LPXK_COXBR Tetraacyldisaccharide 4'-kinase OS=Coxiella burnetii (strain RSA
331 / Henzerling II) GN=lpxK PE=3 SV=1
Length = 325
Score = 111 bits (278), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 142/312 (45%), Gaps = 63/312 (20%)
Query: 24 QSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFL 83
+S L +LS S LY I + +R Y G + PVP++ VGN+T GG+GKTP V +L
Sbjct: 12 RSLLGGILSPFSFLYQIIVRIRRGLYAVGLKKISKFPVPIVIVGNITVGGSGKTPFVIWL 71
Query: 84 AHCLADSEISPLILTRGYAG------------------GDEVRMLERHLLERPAKIGKNC 125
A+ L + P +++RGY G GDE +L + ++ P + ++
Sbjct: 72 ANELKNRGFRPGVVSRGYGGKANRFPQTVTENSDPLQVGDEAVLLMKK-IDCPMVVCRDR 130
Query: 126 INPKVGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMA 185
V L++ + VI DDG+QH+SL RDLEI +++ GN + LP GPLREP
Sbjct: 131 -GAAVKHLLRNFQCDVVIGDDGLQHYSLGRDLEIALIDDRH-LGNGRCLPAGPLREPKSR 188
Query: 186 LKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTA 245
L D V ++ P+ ++++ N KI
Sbjct: 189 LNTVDFVVP-----------------------------KQLRPNEIYQLKNPAKKIDFNE 219
Query: 246 VCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKF 305
+ V V+ IG+ F + L+ LG +V F DH+ +++ D F
Sbjct: 220 LKELTVHAVAGIGNPGYFFKQLETLG-ANVIAHPFRDHYFYRSEDFN------------F 266
Query: 306 NPKPIVVVTEKD 317
+ ++++TEKD
Sbjct: 267 DDDHLIILTEKD 278
>sp|A8GCH7|LPXK_SERP5 Tetraacyldisaccharide 4'-kinase OS=Serratia proteamaculans (strain
568) GN=lpxK PE=3 SV=1
Length = 326
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 122/266 (45%), Gaps = 37/266 (13%)
Query: 38 YGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLIL 97
YG+ L YR G R PVPV+ VGNLT GGNGKTPMV +L L ++
Sbjct: 23 YGLVSGLIRLSYRCGLRKSWRAPVPVVVVGNLTAGGNGKTPMVIWLVEQLQQRGYRVGVV 82
Query: 98 TRGYAGGDEVRML-------ERHLLERPAKIGKN-----CINPK----VGSHLKSGKIGA 141
+RGY G E L + + P I + I+PK V + LK +
Sbjct: 83 SRGYGGKAEAYPLLLNAGTTTQQAGDEPVLIYQRTAAPVAISPKRSEAVQALLKQQPLDV 142
Query: 142 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLIS 201
VI DDG+QH++L+RD E+V+++G+ +GN LP GP+RE L D + + ++
Sbjct: 143 VITDDGLQHYALQRDFELVVIDGVRRFGNGWWLPAGPMRERASRLNSVDALIANGG--VA 200
Query: 202 EQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSAN 261
+ + L+ RD N+ S AV +V+ ++ IG
Sbjct: 201 QPGEIAMRLQARDAV-------------------NVASGERRPAVELPHVVAMAGIGHPP 241
Query: 262 AFVQSLQKLGPCSVNRLDFNDHHSFQ 287
F +L+KLG + F DH +Q
Sbjct: 242 RFFATLEKLGVAVEKEVAFADHQEYQ 267
>sp|Q21J10|LPXK_SACD2 Tetraacyldisaccharide 4'-kinase OS=Saccharophagus degradans (strain
2-40 / ATCC 43961 / DSM 17024) GN=lpxK PE=3 SV=1
Length = 361
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 142/305 (46%), Gaps = 44/305 (14%)
Query: 40 ISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTR 99
+S F R S + S + VPV VGN+ GG GKTP + L H LA+ I+ ++ R
Sbjct: 33 LSYFRRRSQTQ----SSVKFAVPVCIVGNIAIGGTGKTPTIIALVHALAEQGITAGVVAR 88
Query: 100 GYAGG---DEVRMLERHLL-----ERPAKIGK--NCINPKVGSH--------LKSGKIGA 141
GY DEVR+L+ + + P I K C+ VGS+ LKS +
Sbjct: 89 GYGASLAKDEVRVLDANATAAMVGDEPLLIYKRTGCV-VAVGSNRVAACETLLKSHAVDV 147
Query: 142 VILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVH------ 195
++ DDGMQH+ L RDLE+ +V+G +GN +LLP+GPLRE L+ + +V+
Sbjct: 148 ILSDDGMQHYKLGRDLELALVDGERVFGNGQLLPVGPLREHPKRLQSVNWLLVNGGSAEH 207
Query: 196 -HADLISEQNLKDIELEMR--DIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVL 252
+A L + + + EL + + K+ + F ++ L + + + +
Sbjct: 208 VNARLQALEAINAAELSSKPNKLNKTPAPVFAQLEAVKLVNLATGKTLLLQNITELGAFV 267
Query: 253 CVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVV 312
V+ IG+ F ++LQ G + + DHH F + D K +V
Sbjct: 268 AVAGIGNPARFFKTLQSTGITGFDTFSYPDHHKFTSADFRQFDNK------------AIV 315
Query: 313 VTEKD 317
+TEKD
Sbjct: 316 MTEKD 320
>sp|Q080T3|LPXK_SHEFN Tetraacyldisaccharide 4'-kinase OS=Shewanella frigidimarina (strain
NCIMB 400) GN=lpxK PE=3 SV=1
Length = 335
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 152/332 (45%), Gaps = 62/332 (18%)
Query: 4 LRRIVNEIAYAQDHAKLTPIQSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPV 63
++++++ I Y AK L+PL S ++ ++R + FGF LPVPV
Sbjct: 1 MQQLIHRIWYQGHQAKWL-----LLPL----SGIFWFISYIRRLLFSFGFKQAQVLPVPV 51
Query: 64 ISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYA-----------------GGDE 106
I VGN+T GG+GKTP V +L L P +++RGY GDE
Sbjct: 52 IVVGNITAGGSGKTPTVIYLIELLRQHGYKPGVISRGYGVNVDGVVAVTPNAKASDVGDE 111
Query: 107 VRMLERHLLERPAKIGKNCINPKVGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLM 166
M+ + P +G ++ + L + +I DDG+QH++L RD+EI +V+G
Sbjct: 112 PAMIVAR-TQVPMVVGAKRVS-AAQTLLTDFDVDVIISDDGLQHYALGRDIEIALVDGER 169
Query: 167 PWGNRKLLPLGPLREPLMALKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRM 226
+GN LLP GPLRE L L D + + + + L +E
Sbjct: 170 RYGNHCLLPAGPLREGLWRLNSVDFVINNGGPAQNGEVLMALE----------------- 212
Query: 227 VPSYLFEV-GNINSKIPLTAVCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHS 285
P+ L V N+ K +V+ ++ IG+ F S+ +LG V ++F DH +
Sbjct: 213 -PAPLCLVDNNLQDKFN----QQNSVVAMAGIGNPQRFFNSISQLGYKVVKTVEFADHQA 267
Query: 286 FQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 317
F +K+L +L + + +++TEKD
Sbjct: 268 FD-------QKQLSDLSVQHS----LLMTEKD 288
>sp|B6J6T1|LPXK_COXB1 Tetraacyldisaccharide 4'-kinase OS=Coxiella burnetii (strain
CbuK_Q154) GN=lpxK PE=3 SV=1
Length = 325
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 139/311 (44%), Gaps = 61/311 (19%)
Query: 24 QSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFL 83
+S L +LS S LY I + +R Y G + PVP++ VGN+T GG+GKTP V +L
Sbjct: 12 RSLLGGILSPFSFLYQIIVRIRRGLYAVGLKKISKFPVPIVIVGNITVGGSGKTPFVIWL 71
Query: 84 AHCLADSEISPLILTRGYAGGDEVRMLERHLLER-PAKIGKNCI---------------- 126
A+ L + P +++RGY GG R L+ P ++G +
Sbjct: 72 ANELKNRGFRPGVVSRGY-GGKANRFLQTVTENSDPLQVGDEAVLLMKKIDCPMVVCRDR 130
Query: 127 NPKVGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMAL 186
V L++ + VI DDG+QH+SL RDLEI +++ GN + LP GPLREP L
Sbjct: 131 GAAVKHLLRNFQCDVVIGDDGLQHYSLGRDLEIALLDDRH-LGNGRCLPAGPLREPKSRL 189
Query: 187 KRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAV 246
D V ++ P+ ++++ N KI +
Sbjct: 190 NTVDFVVP-----------------------------KQLRPNEIYQLKNPAKKIDFNEL 220
Query: 247 CNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFN 306
V V+ IG+ F + L+ LG +V F DH+ +++ D F+
Sbjct: 221 KELTVHAVAGIGNPGYFFKQLETLG-ANVIAHPFRDHYFYRSEDFN------------FD 267
Query: 307 PKPIVVVTEKD 317
++++TEKD
Sbjct: 268 DDHLIILTEKD 278
>sp|A6VQ32|LPXK_ACTSZ Tetraacyldisaccharide 4'-kinase OS=Actinobacillus succinogenes
(strain ATCC 55618 / 130Z) GN=lpxK PE=3 SV=1
Length = 325
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 142/310 (45%), Gaps = 48/310 (15%)
Query: 24 QSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFL 83
+S + LL S L+ + +R ++ G S ++ PVPVI VGNL+ GGNGKTP+V +L
Sbjct: 7 RSKIAYLLLPFSLLFWLISTIRRFLFQSGILSAYKAPVPVIVVGNLSVGGNGKTPVVIWL 66
Query: 84 AHCLADSEISPLILTRGYAGGDEVRMLERHLLERPAKIGKN------------CINPK-- 129
L ++ +++RGY EV L + P + G CI+P
Sbjct: 67 VQQLQMRGLNCGVISRGYGSQSEVYPLLVNAETDPVRGGDEPVLIAKRAGVPVCISPNRQ 126
Query: 130 --VGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALK 187
+ L S ++ DDG+QH+ L+RD+EIV+++ + GN +LP GPLRE L
Sbjct: 127 QAIELLLSSYPCDVIVSDDGLQHYKLQRDIEIVVMDAVRGLGNGWVLPAGPLRELPSRLA 186
Query: 188 RADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVC 247
AD + + E D + R+VP Y + N K L A
Sbjct: 187 DADFIIGNGG----ENVYTDTAM--------------RLVPHYAINLVT-NEKRELNAFE 227
Query: 248 NANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNP 307
A + ++ IG+ + F + LQ G V+ F DH F A +L +F P
Sbjct: 228 QA--IAIAGIGNPDRFFKMLQDEGIRLVSSQAFQDHQKFSA-----------DLFARFAP 274
Query: 308 KPIVVVTEKD 317
+++TEKD
Sbjct: 275 NVPLLMTEKD 284
>sp|Q83D83|LPXK_COXBU Tetraacyldisaccharide 4'-kinase OS=Coxiella burnetii (strain RSA
493 / Nine Mile phase I) GN=lpxK PE=3 SV=1
Length = 325
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 142/312 (45%), Gaps = 63/312 (20%)
Query: 24 QSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFL 83
+S L +LS S LY I + +R Y G + PVP++ VGN+T GG+GKTP V +L
Sbjct: 12 RSLLGGILSPFSFLYQIIVRIRRGLYAVGLKKISKFPVPIVIVGNITVGGSGKTPFVIWL 71
Query: 84 AHCLADSEISPLILTRGYAG------------------GDEVRMLERHLLERPAKIGKNC 125
A+ L + P +++RGY G GDE +L + ++ P + ++
Sbjct: 72 ANELKNRGFRPGVVSRGYGGKANRFPQTVTENSDPLQVGDEAVLLMKK-IDCPMVVCRDR 130
Query: 126 INPKVGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMA 185
V L++ + VI DDG+QH+SL RDLEI +++ GN + LP GPLREP
Sbjct: 131 -GAAVKHLLRNFQCDVVIGDDGLQHYSLGRDLEIALLDDRH-LGNGRCLPAGPLREPKSR 188
Query: 186 LKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTA 245
L D V ++ P+ ++++ N KI
Sbjct: 189 LNTVDFVVP-----------------------------KQLRPNEIYQLKNPAKKIDFNE 219
Query: 246 VCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKF 305
+ V V+ IG+ F + L+ LG +V F DH+ +++ D F
Sbjct: 220 LKELTVHAVAGIGNPGYFFKQLETLG-ANVIAHPFRDHYFYRSEDFN------------F 266
Query: 306 NPKPIVVVTEKD 317
+ ++++TEKD
Sbjct: 267 DDDHLIILTEKD 278
>sp|A9KFL0|LPXK_COXBN Tetraacyldisaccharide 4'-kinase OS=Coxiella burnetii (strain Dugway
5J108-111) GN=lpxK PE=3 SV=1
Length = 325
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 142/312 (45%), Gaps = 63/312 (20%)
Query: 24 QSSLIPLLSLASSLYGISLFLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFL 83
+S L +LS S LY I + +R Y G + PVP++ VGN+T GG+GKTP V +L
Sbjct: 12 RSLLGGILSPFSFLYQIIVRIRRGLYAVGLKKISKFPVPIVIVGNITVGGSGKTPFVIWL 71
Query: 84 AHCLADSEISPLILTRGYAG------------------GDEVRMLERHLLERPAKIGKNC 125
A+ L + P +++RGY G GDE +L + ++ P + ++
Sbjct: 72 ANELKNRGFRPGVVSRGYGGKANRFPQTVTENSDPLQVGDEAVLLMKK-IDCPMVVCRDR 130
Query: 126 INPKVGSHLKSGKIGAVILDDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMA 185
V L++ + VI DDG+QH+SL RDLEI +++ GN + LP GPLREP
Sbjct: 131 -GAAVKHLLRNFQCDVVIGDDGLQHYSLGRDLEIALLDDRH-LGNGRCLPAGPLREPKSR 188
Query: 186 LKRADIAVVHHADLISEQNLKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTA 245
L D V ++ P+ ++++ N KI
Sbjct: 189 LNTVDFVVP-----------------------------KQLRPNEIYQLKNPAKKIDFNE 219
Query: 246 VCNANVLCVSAIGSANAFVQSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKF 305
+ V V+ IG+ F + L+ LG +V F DH+ +++ D F
Sbjct: 220 LKELTVHAVAGIGNPGYFFKQLETLG-ANVIAHPFRDHYFYRSEDFN------------F 266
Query: 306 NPKPIVVVTEKD 317
+ ++++TEKD
Sbjct: 267 DDDHLIILTEKD 278
>sp|A1STC8|LPXK_PSYIN Tetraacyldisaccharide 4'-kinase OS=Psychromonas ingrahamii (strain
37) GN=lpxK PE=3 SV=1
Length = 320
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 128/274 (46%), Gaps = 43/274 (15%)
Query: 43 FLRHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYA 102
F R Y+ GFF +++ +PVI VGN++ GGNGKTP V +L L P +++RGY
Sbjct: 26 FCRRLAYQKGFFKRYKSKLPVIIVGNISVGGNGKTPFVIWLCEMLITVGYKPAVISRGYG 85
Query: 103 G---------GDEVRMLERHLLERPAKIGKNCINPKVGSHLKSGKI---------GAVIL 144
G GD ++ E + P I K P V + + +I
Sbjct: 86 GKSNHYPLLVGDHIKGHEAG--DEPVLIHKRLGIPVVVDPNRKNAVKYIEQHFLADIIIS 143
Query: 145 DDGMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLISEQN 204
DDG+QH++L+RD+EIV+V+G +GN+ L+P+GPLRE L L D V + ++E
Sbjct: 144 DDGLQHYALQRDIEIVIVDGKRRFGNQHLMPIGPLRENLSRLNSVDFVVNNGGQQVNEIT 203
Query: 205 LKDIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSANAFV 264
+ L+ ++ ++ E ++S + + A +AIG F
Sbjct: 204 ML---LKAQNCQRVDG------------ETAQLSSGVQVNA--------CAAIGYPQRFF 240
Query: 265 QSLQKLGPCSVNRLDFNDHHSFQARDIEMIKKKL 298
+L + + + FNDHH+F D + +
Sbjct: 241 DTLNQQQFEILKAVGFNDHHAFSKDDFTQFEASI 274
>sp|Q5E0F1|LPXK_VIBF1 Tetraacyldisaccharide 4'-kinase OS=Vibrio fischeri (strain ATCC
700601 / ES114) GN=lpxK PE=3 SV=1
Length = 328
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 139/291 (47%), Gaps = 52/291 (17%)
Query: 45 RHSFYRFGFFSKHRLPVPVISVGNLTWGGNGKTPMVEFLAHCLADSEISPLILTRGYAG- 103
R S Y+ G +R VPV+ VGN+T GGNGKTP+V +L L + +RGY G
Sbjct: 34 RKSDYQSGKKQSYRSSVPVVVVGNITAGGNGKTPVVVWLVEQLQSKGYKVGVASRGYGGK 93
Query: 104 -----------------GDEVRMLERHLLERPAKIGKNCINPKVGSHLKSGKIGAVILDD 146
GDE ++++ A++ + + L+ + +I DD
Sbjct: 94 APHYPYLLTETTTPDISGDEPVLIKQRT---KAEVAVAPVRSEAVKMLEQQGVDFIITDD 150
Query: 147 GMQHWSLRRDLEIVMVNGLMPWGNRKLLPLGPLREPLMALKRADIAVVHHADLISEQNLK 206
G+QH++L+RD+E ++++G +GN+ +PLGPLRE + L D + + + S++N
Sbjct: 151 GLQHYALQRDIEFIVIDGKRRFGNQHYIPLGPLREGVERLSSVDFLICNGGE--SQEN-- 206
Query: 207 DIELEMRDIKKSLSIFFTRMVPSYLFEVGNINSKIPLTAVCNANVLCVSAIGSANAFVQS 266
E+ M R+ PS E N+ + + +N++ + IG F ++
Sbjct: 207 --EVSM------------RLQPS---EAINLVTGERRSVSSLSNLVAFAGIGHPPRFFET 249
Query: 267 LQKLGPCSVNRLDFNDHHSFQARDIEMIKKKLEELEGKFNPKPIVVVTEKD 317
L +L V+ F DH +F+ +IE + + E+L ++TEKD
Sbjct: 250 LNQLKANVVHTQGFEDHKAFEPTEIEQLMQYGEQL----------IMTEKD 290
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,131,835
Number of Sequences: 539616
Number of extensions: 5922853
Number of successful extensions: 15808
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 381
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 14781
Number of HSP's gapped (non-prelim): 526
length of query: 364
length of database: 191,569,459
effective HSP length: 119
effective length of query: 245
effective length of database: 127,355,155
effective search space: 31202012975
effective search space used: 31202012975
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)