Query 017908
Match_columns 364
No_of_seqs 242 out of 1077
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 06:51:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017908.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017908hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hks_A Heat-shock transcriptio 100.0 6E-40 2E-44 274.0 6.7 95 10-104 2-106 (106)
2 2ldu_A Heat shock factor prote 100.0 2.1E-39 7.1E-44 278.5 8.2 104 5-108 10-124 (125)
3 3hts_B Heat shock transcriptio 100.0 2.5E-33 8.4E-38 233.5 4.2 85 5-89 5-100 (102)
4 4avp_A ETS translocation varia 93.2 0.057 1.9E-06 45.0 3.4 73 14-86 13-90 (106)
5 2dao_A Transcription factor ET 90.8 0.19 6.4E-06 42.7 3.8 80 7-86 3-88 (118)
6 2ypr_A Protein FEV; transcript 89.8 0.21 7.1E-06 41.3 3.2 75 13-87 8-87 (102)
7 1fli_A FLI-1; transcription/DN 89.7 0.17 5.8E-06 41.6 2.6 62 13-74 6-68 (98)
8 1yo5_C SAM pointed domain cont 89.5 0.15 5.1E-06 41.9 2.1 72 4-75 2-76 (97)
9 1awc_A Protein (GA binding pro 89.3 0.19 6.6E-06 42.1 2.7 70 17-86 5-79 (110)
10 1bc8_C SAP-1, protein (SAP-1 E 89.1 0.11 3.8E-06 42.4 1.1 76 12-87 4-84 (93)
11 1wwx_A E74-like factor 5 ESE-2 88.6 0.29 1E-05 40.8 3.3 79 7-86 3-88 (107)
12 1gvj_A C-ETS-1 protein, P54; t 86.1 0.38 1.3E-05 42.2 2.7 78 10-87 37-119 (146)
13 2nny_A C-ETS-1 protein, P54; p 85.7 0.56 1.9E-05 42.1 3.6 76 11-86 63-143 (171)
14 3jtg_A ETS-related transcripti 84.2 0.49 1.7E-05 39.1 2.4 73 14-86 6-85 (103)
15 1hbx_G ETS-domain protein ELK- 80.8 0.87 3E-05 40.3 2.8 76 12-87 5-85 (157)
16 2jee_A YIIU; FTSZ, septum, coi 80.5 8.3 0.00029 30.6 8.1 47 133-179 25-71 (81)
17 2lf8_A Transcription factor ET 76.1 0.66 2.3E-05 39.8 0.0 58 17-74 9-68 (128)
18 1pue_E Protein (transcription 73.2 1.4 4.6E-05 35.6 1.7 69 17-86 6-83 (89)
19 3m48_A General control protein 71.4 5.6 0.00019 26.6 4.0 24 133-156 5-28 (33)
20 1kd8_B GABH BLL, GCN4 acid bas 70.2 6 0.0002 26.9 4.0 26 133-158 6-31 (36)
21 2wt7_A Proto-oncogene protein 68.4 12 0.00041 27.7 5.9 34 132-165 27-60 (63)
22 1t2k_D Cyclic-AMP-dependent tr 66.3 12 0.00042 27.3 5.6 34 132-165 26-59 (61)
23 2jee_A YIIU; FTSZ, septum, coi 66.1 18 0.00062 28.6 6.7 39 134-172 40-78 (81)
24 2yy0_A C-MYC-binding protein; 64.7 13 0.00046 26.9 5.3 31 135-165 19-49 (53)
25 3c3g_A Alpha/beta peptide with 64.2 9.6 0.00033 25.4 4.0 25 133-157 5-29 (33)
26 3c3f_A Alpha/beta peptide with 62.9 10 0.00036 25.4 4.0 25 133-157 6-30 (34)
27 1uo4_A General control protein 62.8 10 0.00036 25.4 4.0 24 133-156 6-29 (34)
28 2oxj_A Hybrid alpha/beta pepti 62.5 11 0.00037 25.3 4.0 25 133-157 6-30 (34)
29 1kd8_A GABH AIV, GCN4 acid bas 61.6 18 0.00062 24.5 5.0 28 132-159 5-32 (36)
30 2bni_A General control protein 60.3 12 0.00042 25.1 4.0 25 133-157 6-30 (34)
31 2yy0_A C-MYC-binding protein; 59.4 17 0.00059 26.3 5.1 29 143-171 20-48 (53)
32 2hy6_A General control protein 59.4 13 0.00045 24.9 4.0 25 133-157 6-30 (34)
33 1hjb_A Ccaat/enhancer binding 59.1 15 0.0005 29.4 5.1 34 133-166 41-74 (87)
34 2xdj_A Uncharacterized protein 59.1 28 0.00095 27.5 6.7 32 139-170 24-55 (83)
35 2wq1_A General control protein 57.1 15 0.00052 24.4 4.0 24 133-156 5-28 (33)
36 1deb_A APC protein, adenomatou 55.3 58 0.002 23.7 7.7 40 138-177 6-45 (54)
37 1ci6_A Transcription factor AT 53.9 24 0.00084 26.1 5.3 33 132-164 27-59 (63)
38 3hnw_A Uncharacterized protein 52.6 60 0.0021 27.6 8.3 44 134-177 81-124 (138)
39 1jnm_A Proto-oncogene C-JUN; B 51.6 12 0.00041 27.5 3.2 34 132-165 26-59 (62)
40 3efg_A Protein SLYX homolog; x 50.2 35 0.0012 26.4 5.9 45 132-176 18-62 (78)
41 4dzn_A Coiled-coil peptide CC- 50.1 24 0.00082 23.0 4.0 23 134-156 8-30 (33)
42 2wt7_B Transcription factor MA 49.8 36 0.0012 27.4 6.0 38 136-173 49-86 (90)
43 3e98_A GAF domain of unknown f 49.7 24 0.00083 32.7 5.8 68 85-171 41-111 (252)
44 2r2v_A GCN4 leucine zipper; co 49.0 24 0.00083 23.6 4.0 24 133-156 6-29 (34)
45 1gu4_A CAAT/enhancer binding p 45.3 17 0.00059 28.3 3.4 29 133-161 41-69 (78)
46 2dgc_A Protein (GCN4); basic d 44.5 19 0.00066 26.8 3.4 26 132-157 34-59 (63)
47 1nkp_A C-MYC, MYC proto-oncoge 43.0 44 0.0015 26.2 5.5 33 136-168 53-85 (88)
48 1nkp_B MAX protein, MYC proto- 42.8 27 0.00094 26.7 4.2 31 137-167 49-79 (83)
49 4dzn_A Coiled-coil peptide CC- 41.3 59 0.002 21.1 4.8 20 136-155 3-22 (33)
50 2xdj_A Uncharacterized protein 40.8 1.3E+02 0.0044 23.6 8.3 41 144-184 22-62 (83)
51 3i00_A HIP-I, huntingtin-inter 38.3 1.4E+02 0.0049 24.8 8.3 36 134-169 14-49 (120)
52 3q8t_A Beclin-1; autophagy, AT 38.2 1.5E+02 0.0051 23.6 8.3 41 133-173 9-49 (96)
53 1nlw_A MAD protein, MAX dimeri 36.8 45 0.0015 25.8 4.6 31 136-166 48-78 (80)
54 1a93_B MAX protein, coiled coi 36.0 56 0.0019 21.9 4.2 17 135-151 14-30 (34)
55 1deb_A APC protein, adenomatou 36.0 1.2E+02 0.0043 22.0 7.2 38 133-170 8-45 (54)
56 1gd2_E Transcription factor PA 34.5 47 0.0016 25.4 4.3 33 133-165 34-66 (70)
57 2aze_A Transcription factor DP 33.9 1.4E+02 0.0048 26.2 7.7 43 135-177 5-50 (155)
58 2wt7_B Transcription factor MA 33.9 62 0.0021 26.0 5.0 37 132-168 52-88 (90)
59 2dq0_A Seryl-tRNA synthetase; 33.4 1.7E+02 0.0057 29.3 9.3 65 132-196 42-117 (455)
60 1wt6_A Myotonin-protein kinase 32.9 1.7E+02 0.0057 23.1 7.2 30 143-172 25-54 (81)
61 1lwu_C Fibrinogen gamma chain; 32.8 1.2E+02 0.004 29.5 7.8 46 133-178 10-55 (323)
62 3qne_A Seryl-tRNA synthetase, 32.2 1.8E+02 0.006 29.7 9.3 65 132-196 44-119 (485)
63 3swf_A CGMP-gated cation chann 31.8 1.8E+02 0.0062 22.6 7.4 47 132-181 4-50 (74)
64 3ra3_B P2F; coiled coil domain 30.8 42 0.0014 21.1 2.8 16 139-154 4-19 (28)
65 3oja_B Anopheles plasmodium-re 30.7 1.4E+02 0.0048 29.7 8.3 19 138-156 512-530 (597)
66 1dh3_A Transcription factor CR 29.6 49 0.0017 23.8 3.5 24 133-156 27-50 (55)
67 3tnu_B Keratin, type II cytosk 29.0 2.3E+02 0.0078 23.3 8.0 36 134-169 35-70 (129)
68 1g6u_A Domain swapped dimer; d 28.3 1.5E+02 0.0052 20.6 6.1 25 150-174 21-45 (48)
69 3oja_A Leucine-rich immune mol 28.1 1.7E+02 0.0058 28.5 8.2 42 136-177 429-470 (487)
70 2v66_B Nuclear distribution pr 27.9 2.6E+02 0.0088 23.1 8.2 35 144-178 37-71 (111)
71 4aj5_K Spindle and kinetochore 27.8 2.8E+02 0.0095 23.5 8.2 50 132-181 47-96 (123)
72 3a2a_A Voltage-gated hydrogen 27.6 1.6E+02 0.0056 21.7 5.9 35 134-168 10-44 (58)
73 3m91_A Proteasome-associated A 27.5 1.7E+02 0.0059 21.0 6.1 36 133-168 14-49 (51)
74 3cue_D Transport protein parti 27.2 41 0.0014 30.2 3.3 61 14-75 88-157 (193)
75 1wle_A Seryl-tRNA synthetase; 27.1 2.7E+02 0.0091 28.4 9.6 24 132-155 81-104 (501)
76 2v66_B Nuclear distribution pr 27.0 2.7E+02 0.0091 23.0 8.1 51 133-183 40-90 (111)
77 4etp_A Kinesin-like protein KA 26.6 1.3E+02 0.0043 29.7 7.0 35 133-167 8-42 (403)
78 2w83_C C-JUN-amino-terminal ki 26.5 96 0.0033 24.3 4.8 30 133-162 35-64 (77)
79 1ses_A Seryl-tRNA synthetase; 26.1 2E+02 0.0067 28.5 8.3 65 132-196 39-112 (421)
80 3he5_B Synzip2; heterodimeric 26.0 1.8E+02 0.006 20.6 6.1 36 133-175 8-43 (52)
81 4etp_A Kinesin-like protein KA 25.7 2E+02 0.007 28.2 8.3 42 136-177 4-45 (403)
82 1fxk_C Protein (prefoldin); ar 25.7 1.8E+02 0.006 23.7 6.7 44 132-175 85-128 (133)
83 3kqg_A Langerin, C-type lectin 25.6 80 0.0027 26.3 4.7 34 133-170 4-37 (182)
84 1g6u_A Domain swapped dimer; d 25.6 1.7E+02 0.0059 20.3 6.7 19 148-166 26-44 (48)
85 3ghg_A Fibrinogen alpha chain; 25.4 1.2E+02 0.0042 31.5 6.7 13 139-151 114-126 (562)
86 2aze_B Transcription factor E2 25.0 1.5E+02 0.0051 24.1 6.0 32 145-176 9-40 (106)
87 3t97_C Nuclear pore glycoprote 24.9 1.2E+02 0.0042 22.7 5.0 23 145-167 15-37 (64)
88 1ci6_A Transcription factor AT 23.8 2.2E+02 0.0074 20.8 6.3 36 135-170 23-58 (63)
89 1go4_E MAD1 (mitotic arrest de 23.5 1.4E+02 0.0048 24.3 5.5 33 134-166 11-43 (100)
90 4gkw_A Spindle assembly abnorm 22.9 3.6E+02 0.012 23.3 8.2 35 136-170 47-81 (167)
91 3bj4_A Potassium voltage-gated 22.9 1.6E+02 0.0056 21.1 5.1 36 145-180 13-48 (49)
92 3na7_A HP0958; flagellar bioge 22.7 2.9E+02 0.0099 25.0 8.2 25 160-184 94-118 (256)
93 3tnu_A Keratin, type I cytoske 21.9 2.2E+02 0.0074 23.5 6.6 31 135-165 38-68 (131)
94 1uii_A Geminin; human, DNA rep 21.3 2.5E+02 0.0085 22.2 6.3 19 138-156 49-67 (83)
95 2xu6_A MDV1 coiled coil; prote 21.1 1.7E+02 0.0057 22.7 5.1 43 133-175 26-68 (72)
96 2v71_A Nuclear distribution pr 20.3 3.8E+02 0.013 24.0 8.2 33 144-176 90-122 (189)
No 1
>1hks_A Heat-shock transcription factor; transcription regulation; NMR {Drosophila melanogaster} SCOP: a.4.5.22 PDB: 1hkt_A
Probab=100.00 E-value=6e-40 Score=274.05 Aligned_cols=95 Identities=40% Similarity=0.827 Sum_probs=91.3
Q ss_pred CCCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhhhhcccccCCCChhhHhhhhccCceeeeC----------
Q 017908 10 NSLPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVD---------- 79 (364)
Q Consensus 10 ~~~~~Fl~KLy~mLed~~~~~IIsWs~~G~SFvI~d~~~F~k~VLP~yFkhsnfsSFvRQLN~YGFrKv~---------- 79 (364)
+++|+||.|||+||+|+++++||+|+++|++|||+|+.+|+++|||+||||+||+|||||||+|||+|+.
T Consensus 2 ~~~p~F~~KL~~mv~d~~~~~iI~W~~~G~sFvI~d~~~F~~~vLp~yFkh~n~~SFvRQLN~YGF~Kv~~~~~~~~~~~ 81 (106)
T 1hks_A 2 SGVPAFLAKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPLNYKHNNMASFIRQLNMYGFHKITSIDNGGLRFD 81 (106)
T ss_dssp TTCCTTHHHHHHHHSSSTTTTTSEESTTTSCEECSCCSTTTTTTSTTTTSCCCHHHHHHHHHHHCCCCSSCSSSCCSSCT
T ss_pred CCcCcHHHHHHHHhcCCCCCCEEEEeCCCCEEEECCHHHHHHHHhHHhcCCCcHHHHHHhhhcCCCeEEecccccCccCC
Confidence 5678999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred CCcceecCCCcccCCcccchhhhcc
Q 017908 80 PDRYEFANEGFLRGQKHLLKSISRR 104 (364)
Q Consensus 80 ~d~~eF~H~~F~Rg~~~LL~~IkRk 104 (364)
++.|+|+||+|+||+|+||.+|+||
T Consensus 82 ~~~~ef~h~~F~Rg~~~LL~~IkRk 106 (106)
T 1hks_A 82 RDEIEFSHPFFKRNSPFLLDQIKRK 106 (106)
T ss_dssp TSTTEECCTTCCSSCTTSTTTCCCC
T ss_pred CCceEEECcCccCcCHHHHhhCcCC
Confidence 4789999999999999999999997
No 2
>2ldu_A Heat shock factor protein 1; structural genomics, northeast structural genomics consortiu DNA-binding, PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=278.54 Aligned_cols=104 Identities=48% Similarity=0.892 Sum_probs=97.9
Q ss_pred CCCCCCCCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhhhhcccccCCCChhhHhhhhccCceeeeC-----
Q 017908 5 SAANGNSLPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVD----- 79 (364)
Q Consensus 5 s~~~~~~~~~Fl~KLy~mLed~~~~~IIsWs~~G~SFvI~d~~~F~k~VLP~yFkhsnfsSFvRQLN~YGFrKv~----- 79 (364)
-+.....+++||.|||+||+||++++||+|+++|++|+|+|+.+|+++|||+||||+||+|||||||+|||+|+.
T Consensus 10 ~~~~~~~~~~F~~KL~~ml~d~~~~~iI~W~~~G~sFvV~d~~~F~~~vLp~yFkh~nfsSFvRQLN~YGF~Kv~~~~~~ 89 (125)
T 2ldu_A 10 HMAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQG 89 (125)
T ss_dssp SCCSSCCCCHHHHHHHHHHHCTTTTTTEEECTTSSEEEECCHHHHHHHHHHHHSSCCCHHHHHHHHHHTTCEEEECSCCS
T ss_pred ccccCCCCCcHHHHHHHHhhCCCCCCEEEEcCCCCEEEEeCHHHHHHHHhHHhcCCCcHHHHHHHhcccCceEEeecccc
Confidence 356778899999999999999999999999999999999999999999999999999999999999999999983
Q ss_pred ------CCcceecCCCcccCCcccchhhhccCCCc
Q 017908 80 ------PDRYEFANEGFLRGQKHLLKSISRRKPAQ 108 (364)
Q Consensus 80 ------~d~~eF~H~~F~Rg~~~LL~~IkRkk~~~ 108 (364)
++.|+|+||+|+||+++||.+|+||+++.
T Consensus 90 ~~~~~~~~~~eF~H~~F~Rg~~~LL~~IkRk~~~~ 124 (125)
T 2ldu_A 90 GLVKPERDDTEFQHPCFLRGQEQLLENIKRKVTSV 124 (125)
T ss_dssp SSSSCSSCCEEEECTTCBTTBGGGTTTSCCCTTSC
T ss_pred ccccCCCCccEEECccccCCCHHHHhhCcCCCCCC
Confidence 46899999999999999999999998753
No 3
>3hts_B Heat shock transcription factor; transcription regulation, DNA-binding protein, complex (WING helix_TURN_ helix-DNA); 1.75A {Kluyveromyces lactis} SCOP: a.4.5.22 PDB: 2hts_A 1fyk_A* 1fym_A 1fyl_A 3hsf_A 1fbu_A 1fbs_A 1fbq_A
Probab=99.97 E-value=2.5e-33 Score=233.51 Aligned_cols=85 Identities=46% Similarity=0.854 Sum_probs=77.7
Q ss_pred CCCCCCCCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhhhhcccccCCCChhhHhhhhccCceeeeC-----
Q 017908 5 SAANGNSLPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPKYFKHSNFSSFVRQLNTYGFRKVD----- 79 (364)
Q Consensus 5 s~~~~~~~~~Fl~KLy~mLed~~~~~IIsWs~~G~SFvI~d~~~F~k~VLP~yFkhsnfsSFvRQLN~YGFrKv~----- 79 (364)
.+.+.+.+|+||.|||.||+|+++++||+|+++|++|||+|+.+|+++|||+||||+||+||+||||+|||+|+.
T Consensus 5 ~s~~~~~~p~F~~KL~~ml~d~~~~~iI~W~~~G~sfiI~d~~~F~~~VLp~yFkh~nfsSFvRQLN~YGF~Kv~~~~~g 84 (102)
T 3hts_B 5 ASVGSMARPAFVNKLWSMVNDKSNEKFIHWSTSGESIVVPNRERFVQEVLPKYFKHSNFASFVRQLNMYGWHKVQDVKSG 84 (102)
T ss_dssp -----CCSCHHHHHHHHHHHCGGGTTTSEECTTSCSEEESCHHHHHHHTHHHHCSSCCHHHHHHHHHHTTEEECC-----
T ss_pred cCCCCCCCCcHHHHHHHHhcCCCCCCEEEEeCCCCEEEEcCHHHHHHHHHHHhcCCCcHHHHHHHhhcCCceEeeccccC
Confidence 356678899999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred ------CCcceecCCC
Q 017908 80 ------PDRYEFANEG 89 (364)
Q Consensus 80 ------~d~~eF~H~~ 89 (364)
+++|||+|++
T Consensus 85 ~~~~~~~~~wEF~n~~ 100 (102)
T 3hts_B 85 SMLSNNDSRWEFENER 100 (102)
T ss_dssp ----CCSCCEEEEECC
T ss_pred cccCCCcCCeEecCCC
Confidence 6899999986
No 4
>4avp_A ETS translocation variant 1; transcription, transcriptional activation and repression, DN binding protein, E twenty-SIX, erwing sarcoma; 1.82A {Homo sapiens} PDB: 4b06_A
Probab=93.21 E-value=0.057 Score=45.02 Aligned_cols=73 Identities=23% Similarity=0.464 Sum_probs=55.6
Q ss_pred cHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhhhhcc-cccCCCChhhHhhhhccC---ce-eeeCCCcceec
Q 017908 14 PFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTY---GF-RKVDPDRYEFA 86 (364)
Q Consensus 14 ~Fl~KLy~mLed~~~~~IIsWs~~G~SFvI~d~~~F~k~VLP-~yFkhsnfsSFvRQLN~Y---GF-rKv~~d~~eF~ 86 (364)
....=|.++|+|+++.++|+|...+.-|.+.|+++.++.-=. +-=+..+|..+.|-|..| |. +||...+..|.
T Consensus 13 ~LwqFL~~LL~d~~~~~~I~W~~~~~~Fkl~dp~~VA~lWG~rKnkp~M~YeKlSRaLRyYY~kgii~Kv~G~r~vYk 90 (106)
T 4avp_A 13 QLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVYK 90 (106)
T ss_dssp CHHHHHHHHHHCGGGTTTEEECSSTTEEEESSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHTSEEECTTCSSEEE
T ss_pred eHHHHHHHHHcCccCCCCCcccCCCceEEecCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCeEEecCCCeEEEE
Confidence 455667889999999999999999889999999888864322 122467899999999887 33 67776666664
No 5
>2dao_A Transcription factor ETV6; ETS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.77 E-value=0.19 Score=42.68 Aligned_cols=80 Identities=16% Similarity=0.318 Sum_probs=58.7
Q ss_pred CCCCCCCcHHHHHHHhccCCCCCCceEEcC-CCCeEEEecCchhhhhhcc-cccCCCChhhHhhhhccC---ce-eeeCC
Q 017908 7 ANGNSLPPFLSKIYDMVEDPSTNDIVSWSS-SNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTY---GF-RKVDP 80 (364)
Q Consensus 7 ~~~~~~~~Fl~KLy~mLed~~~~~IIsWs~-~G~SFvI~d~~~F~k~VLP-~yFkhsnfsSFvRQLN~Y---GF-rKv~~ 80 (364)
++.+.....-.=|.++|.|+++.++|+|.. ++.-|.+.|+++.++--=. +-=+.-||...-|-|..| |. +|+..
T Consensus 3 ~~~~g~~~LwqFLleLL~d~~~~~~I~W~~~~~g~Fklvdp~~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~G 82 (118)
T 2dao_A 3 SGSSGCRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHYYKLNIIRKEPG 82 (118)
T ss_dssp CCCCCCCCHHHHHHHHHHCGGGTTTEEEEEGGGTEEEESCHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHTSEECCSS
T ss_pred CccCcchHHHHHHHHHhCCcccCCceEeeCCCCCeEEEeCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCCEEeccC
Confidence 344455667788889999999999999987 4568999999887765322 222457899999999888 33 56665
Q ss_pred Ccceec
Q 017908 81 DRYEFA 86 (364)
Q Consensus 81 d~~eF~ 86 (364)
.+..|.
T Consensus 83 ~r~vY~ 88 (118)
T 2dao_A 83 QRLLFR 88 (118)
T ss_dssp SSSEEE
T ss_pred CeEEEE
Confidence 665654
No 6
>2ypr_A Protein FEV; transcription; 2.64A {Homo sapiens} PDB: 1fli_A
Probab=89.82 E-value=0.21 Score=41.34 Aligned_cols=75 Identities=19% Similarity=0.335 Sum_probs=55.6
Q ss_pred CcHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhhhhcc-cccCCCChhhHhhhhccCc---e-eeeCCCcceecC
Q 017908 13 PPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYG---F-RKVDPDRYEFAN 87 (364)
Q Consensus 13 ~~Fl~KLy~mLed~~~~~IIsWs~~G~SFvI~d~~~F~k~VLP-~yFkhsnfsSFvRQLN~YG---F-rKv~~d~~eF~H 87 (364)
-....=|.++|+|+++.++|+|...+.-|.+.|+++.++.-=. +-=..-||..+-|-|..|- . +||...+..|..
T Consensus 8 i~LwqFLl~LL~d~~~~~~I~W~~~~g~Fkl~dp~~VArlWG~rKnkp~MnYeKlSRaLRyYY~k~ii~Kv~Gkr~vYkF 87 (102)
T 2ypr_A 8 IQLWQFLLELLADRANAGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRYAYRF 87 (102)
T ss_dssp CCHHHHHHHHHTCGGGTTTCEECSSTTEEECSSHHHHHHHHHHHTTCTTCCHHHHHHHHTHHHHTTSEEECSSCSSEEEE
T ss_pred EeHHHHHHHHhcCCCCCCcccccCCCceEEecChHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCcEEecCCCeEEEEe
Confidence 3456667889999999999999988999999999888764211 1124678999999998873 2 566666666543
No 7
>1fli_A FLI-1; transcription/DNA; NMR {Homo sapiens} SCOP: a.4.5.21
Probab=89.74 E-value=0.17 Score=41.64 Aligned_cols=62 Identities=18% Similarity=0.325 Sum_probs=47.6
Q ss_pred CcHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhhhhcc-cccCCCChhhHhhhhccCc
Q 017908 13 PPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYG 74 (364)
Q Consensus 13 ~~Fl~KLy~mLed~~~~~IIsWs~~G~SFvI~d~~~F~k~VLP-~yFkhsnfsSFvRQLN~YG 74 (364)
-..-.=|.++|+|+++.++|+|...+.-|.+.|+++.++--=. +-=..-||...-|-|..|-
T Consensus 6 ~~LwqFL~~LL~d~~~~~~I~W~~~~g~Fklvd~e~VArlWG~rK~kp~MnYeklSRaLRyYY 68 (98)
T 1fli_A 6 IQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYY 68 (98)
T ss_dssp CCSHHHHHHHHHTCSSCSSEECTTSSSSCEECCHHHHHHHHHHHTCCTTCSSHHHHHHHHHHH
T ss_pred eeHHHHHHHHhcCcccCCCeEEeCCCCEEEEcCHHHHHHHHHhccCCCCcCHHHHHHHHHHHH
Confidence 3455567778899999999999999999999999888764321 1224678999999988773
No 8
>1yo5_C SAM pointed domain containing ETS transcription factor; protein-DNA complex, double helix, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.4.5.21
Probab=89.52 E-value=0.15 Score=41.90 Aligned_cols=72 Identities=17% Similarity=0.202 Sum_probs=51.3
Q ss_pred CCCCCCCCCCcHHHHHHHhccCCC-CCCceEEcC-CCCeEEEecCchhhhhhcc-cccCCCChhhHhhhhccCce
Q 017908 4 SSAANGNSLPPFLSKIYDMVEDPS-TNDIVSWSS-SNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYGF 75 (364)
Q Consensus 4 ~s~~~~~~~~~Fl~KLy~mLed~~-~~~IIsWs~-~G~SFvI~d~~~F~k~VLP-~yFkhsnfsSFvRQLN~YGF 75 (364)
|.++++++....-.=|.++|+||+ ..++|+|.. ++.-|.+.|+++.++--=. +-=...||...-|-|..|--
T Consensus 2 ~~~~~~~~~i~LwqFL~eLL~d~~~~~~~I~W~~~~~g~Fkl~d~~~VArlWG~rKnkp~MnYeklSRaLRyYY~ 76 (97)
T 1yo5_C 2 SLDALGSQPIHLWQFLKELLLKPHSYGRFIRWLNKEKGIFKIEDSAQVARLWGIRKNRPAMNYDKLSRSIRQYYK 76 (97)
T ss_dssp -------CCCCHHHHHHHHHHCHHHHTTTEEEEETTTTEEEESCHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTT
T ss_pred CcCCCCCCeeEHHHHHHHHhcCcccCCCceEeecCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHh
Confidence 445666677788888999999986 589999985 6789999999888765322 22246789999999988854
No 9
>1awc_A Protein (GA binding protein alpha); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: a.4.5.21
Probab=89.32 E-value=0.19 Score=42.13 Aligned_cols=70 Identities=17% Similarity=0.305 Sum_probs=51.2
Q ss_pred HHHHHhccCCCCCCceEEcCCCCeEEEecCchhhhhhccc-ccCCCChhhHhhhhccCce----eeeCCCcceec
Q 017908 17 SKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLPK-YFKHSNFSSFVRQLNTYGF----RKVDPDRYEFA 86 (364)
Q Consensus 17 ~KLy~mLed~~~~~IIsWs~~G~SFvI~d~~~F~k~VLP~-yFkhsnfsSFvRQLN~YGF----rKv~~d~~eF~ 86 (364)
.=|.++|+|+++.++|+|...+.-|.+.|+++.++.-=.+ -=..-||...-|-|..|-= +|+...+..|.
T Consensus 5 qFLleLL~d~~~~~~I~W~~~~geFkl~d~e~VArlWG~rKnkp~MnYeKlSRaLRyYY~k~ii~Kv~GkrlvY~ 79 (110)
T 1awc_A 5 QFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYK 79 (110)
T ss_dssp HHHHHHHTCTTTTTTSEECSSSSEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGGGGSSSEEECTTSTTEEE
T ss_pred HHHHHHhcCcccCCceEEeCCCCEEEecCHHHHHHHHHHccCCCCCCHHHHHHHHHHHHhcCCEeeccCCeeEEe
Confidence 3467889999999999999999999999998887653222 2235689999999988733 34444455554
No 10
>1bc8_C SAP-1, protein (SAP-1 ETS domain); DNA-binding domain, winged helix-turn-helix, DNA-binding specificity, transcription/DNA complex; HET: DNA; 1.93A {Homo sapiens} SCOP: a.4.5.21 PDB: 1bc7_C* 1k6o_A 1dux_C*
Probab=89.14 E-value=0.11 Score=42.36 Aligned_cols=76 Identities=17% Similarity=0.376 Sum_probs=56.7
Q ss_pred CCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhhhhcc-cccCCCChhhHhhhhccCc---e-eeeCCCcceec
Q 017908 12 LPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYG---F-RKVDPDRYEFA 86 (364)
Q Consensus 12 ~~~Fl~KLy~mLed~~~~~IIsWs~~G~SFvI~d~~~F~k~VLP-~yFkhsnfsSFvRQLN~YG---F-rKv~~d~~eF~ 86 (364)
.-..-.=|.++|.|++..++|+|...+.-|.+.|+++.++--=. +-=..-||...-|-|..|- . +||...+..|.
T Consensus 4 ~i~Lw~FL~~LL~d~~~~~~I~W~~~~g~Fkl~d~~~VArlWG~rKnk~~MnYeklSRaLRyYY~~~il~Kv~g~r~vY~ 83 (93)
T 1bc8_C 4 AITLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYK 83 (93)
T ss_dssp CCCHHHHHHHHTTCGGGTTTSEECSSSSEEECTTHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHTSEEECTTSTTEEE
T ss_pred cccHHHHHHHHhcCcccCCceEEeCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHhcCcEEecCCCeEEEE
Confidence 34455668899999999999999988889999999888765322 1224678999999998873 2 45665666665
Q ss_pred C
Q 017908 87 N 87 (364)
Q Consensus 87 H 87 (364)
.
T Consensus 84 F 84 (93)
T 1bc8_C 84 F 84 (93)
T ss_dssp E
T ss_pred e
Confidence 3
No 11
>1wwx_A E74-like factor 5 ESE-2B; DNA binding, transcriptional activation and repression, structural genomics; NMR {Homo sapiens} SCOP: a.4.5.21
Probab=88.64 E-value=0.29 Score=40.83 Aligned_cols=79 Identities=18% Similarity=0.317 Sum_probs=56.3
Q ss_pred CCCCCCCcHHHHHHHhccCCC-CCCceEEcC-CCCeEEEecCchhhhhhcc-cccCCCChhhHhhhhccCc----eeeeC
Q 017908 7 ANGNSLPPFLSKIYDMVEDPS-TNDIVSWSS-SNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYG----FRKVD 79 (364)
Q Consensus 7 ~~~~~~~~Fl~KLy~mLed~~-~~~IIsWs~-~G~SFvI~d~~~F~k~VLP-~yFkhsnfsSFvRQLN~YG----FrKv~ 79 (364)
+++++......=|.++|.|++ ..++|+|.. +..-|.+.|+++.++--=. +-=...||...-|-|..|- .+||.
T Consensus 3 sg~~g~i~LwqFL~eLL~d~~~~~~~I~W~~~~~g~Fkl~d~e~VArlWG~rKnkp~MnYeKlSRaLRyYY~~~ii~Kv~ 82 (107)
T 1wwx_A 3 SGSSGSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYYKTGILERVD 82 (107)
T ss_dssp CCCCSSCCHHHHHHHHHHCTTTCCSCCEEEETTTTEEECSCHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHTSEECCS
T ss_pred CCCCCcEEHHHHHHHHHcCcccCCCcEEeecCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHhcCcEEecc
Confidence 345556678888899999986 568999987 4679999999888765321 1124678999999998873 24554
Q ss_pred CCcceec
Q 017908 80 PDRYEFA 86 (364)
Q Consensus 80 ~d~~eF~ 86 (364)
.+..|.
T Consensus 83 -~rlvY~ 88 (107)
T 1wwx_A 83 -RRLVYK 88 (107)
T ss_dssp -SSSEEE
T ss_pred -ceEEEE
Confidence 555554
No 12
>1gvj_A C-ETS-1 protein, P54; transcription, autoinhibition, ETS domain; 1.53A {Homo sapiens} SCOP: a.4.5.21 PDB: 1md0_A 1r36_A 1k78_B 1k79_A* 1k7a_A* 2stt_A* 2stw_A*
Probab=86.14 E-value=0.38 Score=42.16 Aligned_cols=78 Identities=19% Similarity=0.274 Sum_probs=59.2
Q ss_pred CCCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhhhhcc-cccCCCChhhHhhhhccCce----eeeCCCcce
Q 017908 10 NSLPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYGF----RKVDPDRYE 84 (364)
Q Consensus 10 ~~~~~Fl~KLy~mLed~~~~~IIsWs~~G~SFvI~d~~~F~k~VLP-~yFkhsnfsSFvRQLN~YGF----rKv~~d~~e 84 (364)
++....-.=|.++|+|++..++|+|...+.-|.+.|+++.++..=. +-=..-||...-|-|..|-= +||...+..
T Consensus 37 sg~i~LwqFLleLL~d~~~~~~I~Wt~~~~eFklvdpe~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~Gkrlv 116 (146)
T 1gvj_A 37 SGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYV 116 (146)
T ss_dssp CCSCCHHHHHHHHHTCGGGTTTSEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHTTSEEECTTSSSE
T ss_pred CCceeHHHHHHHHhcCcccCCceEeeCCCCEEEeCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCcEEecCCCeEE
Confidence 4566777788899999999999999999999999999888875322 12235689999999988743 466655666
Q ss_pred ecC
Q 017908 85 FAN 87 (364)
Q Consensus 85 F~H 87 (364)
|..
T Consensus 117 Y~F 119 (146)
T 1gvj_A 117 YRF 119 (146)
T ss_dssp EEE
T ss_pred EEe
Confidence 653
No 13
>2nny_A C-ETS-1 protein, P54; protein-DNA complex, transcription/DNA complex; 2.58A {Homo sapiens} PDB: 3ri4_A 3mfk_A 1mdm_B
Probab=85.69 E-value=0.56 Score=42.08 Aligned_cols=76 Identities=20% Similarity=0.299 Sum_probs=57.1
Q ss_pred CCCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhhhhcc-cccCCCChhhHhhhhccCce----eeeCCCccee
Q 017908 11 SLPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYGF----RKVDPDRYEF 85 (364)
Q Consensus 11 ~~~~Fl~KLy~mLed~~~~~IIsWs~~G~SFvI~d~~~F~k~VLP-~yFkhsnfsSFvRQLN~YGF----rKv~~d~~eF 85 (364)
+......=|.++|.|++..++|+|...+.-|.+.|+++.++..=. +-=..-||...-|-|..|-= +|+...+..|
T Consensus 63 g~i~LwqFLleLL~d~~~~~~I~Wt~~~~eFklvdpe~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~GkrlvY 142 (171)
T 2nny_A 63 GPIQLWQFLLELLTDKSSQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVY 142 (171)
T ss_dssp SSCCHHHHHHHHHTCTGGGGTCEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGGGTTTSEEECTTSTTEE
T ss_pred CceeHHHHHHHHhcCcccCCceEeeCCCCEEEeCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCcEeecCCCeEEE
Confidence 455666778899999999999999999999999999888875322 12235689999999988744 3565555555
Q ss_pred c
Q 017908 86 A 86 (364)
Q Consensus 86 ~ 86 (364)
.
T Consensus 143 ~ 143 (171)
T 2nny_A 143 R 143 (171)
T ss_dssp E
T ss_pred E
Confidence 4
No 14
>3jtg_A ETS-related transcription factor ELF-3; ELF3, protein-DNA complex, type II TGF-beta receptor, activa alternative splicing, cytoplasm; HET: DNA; 2.20A {Mus musculus} SCOP: a.4.5.21
Probab=84.23 E-value=0.49 Score=39.13 Aligned_cols=73 Identities=15% Similarity=0.306 Sum_probs=50.9
Q ss_pred cHHHHHHHhccCCC-CCCceEEcCC-CCeEEEecCchhhhhhcc-cccCCCChhhHhhhhccCc---e-eeeCCCcceec
Q 017908 14 PFLSKIYDMVEDPS-TNDIVSWSSS-NNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYG---F-RKVDPDRYEFA 86 (364)
Q Consensus 14 ~Fl~KLy~mLed~~-~~~IIsWs~~-G~SFvI~d~~~F~k~VLP-~yFkhsnfsSFvRQLN~YG---F-rKv~~d~~eF~ 86 (364)
....=|.++|.|++ ..++|+|... ..-|.+.|+++.++--=. +-=...||..+-|-|..|- . +||...+..|.
T Consensus 6 ~LwqFL~~LL~d~~~~~~~I~W~~~~~g~Fkl~dp~~VArlWG~rKnkp~MnYeKlSRaLRyYy~~~ii~Kv~G~r~vY~ 85 (103)
T 3jtg_A 6 HLWEFIRDILIHPELNEGLMKWENRHEGVFKFLRSEAVAQLWGQKKKNSNMTYEKLSRAMRYYYKREILERVDGRRLVYK 85 (103)
T ss_dssp SHHHHHHHHHTCGGGCSSCEEEEETTTTEEEESSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHTTSBCCCTTCTTEEE
T ss_pred cHHHHHHHHHcCcccCCCccccccCCCceEEecCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCcEEecCCceEEEE
Confidence 44556778899987 5789999975 569999999888764211 1114678999999998873 2 45555555543
No 15
>1hbx_G ETS-domain protein ELK-4; gene regulation, transcription complex; 3.15A {Homo sapiens} SCOP: a.4.5.21
Probab=80.80 E-value=0.87 Score=40.29 Aligned_cols=76 Identities=17% Similarity=0.376 Sum_probs=56.9
Q ss_pred CCcHHHHHHHhccCCCCCCceEEcCCCCeEEEecCchhhhhhcc-cccCCCChhhHhhhhccCc---e-eeeCCCcceec
Q 017908 12 LPPFLSKIYDMVEDPSTNDIVSWSSSNNSFIVWKVAEFSRDLLP-KYFKHSNFSSFVRQLNTYG---F-RKVDPDRYEFA 86 (364)
Q Consensus 12 ~~~Fl~KLy~mLed~~~~~IIsWs~~G~SFvI~d~~~F~k~VLP-~yFkhsnfsSFvRQLN~YG---F-rKv~~d~~eF~ 86 (364)
.-....=|.++|.|++..++|+|...+.-|.+.|+++.++-.=. +-=..-||...-|-|..|- + +||...+..|.
T Consensus 5 ~i~LWqFLleLL~d~~~~~~I~Wt~~~geFklvdpe~VArLWG~rKnkp~MnYeKLSRALRyYY~k~Ii~KV~GqrlvYk 84 (157)
T 1hbx_G 5 AITLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYK 84 (157)
T ss_dssp CCCHHHHTTTSSSCGGGTTTEEECSSSSCEEETTHHHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEEECSSCTTEEE
T ss_pred cccHHHHHHHHhcCcccCCceEEeCCCCEEEecCcHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCcEEecCCCeEEEe
Confidence 34455667889999999999999988889999999888875322 2224678999999998873 2 45665666665
Q ss_pred C
Q 017908 87 N 87 (364)
Q Consensus 87 H 87 (364)
.
T Consensus 85 F 85 (157)
T 1hbx_G 85 F 85 (157)
T ss_dssp E
T ss_pred e
Confidence 4
No 16
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=80.51 E-value=8.3 Score=30.58 Aligned_cols=47 Identities=26% Similarity=0.362 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQ 179 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~qrLq~mEqRQ 179 (364)
|..+++.||..|..|.+|...++.....+..+.+.|.+-...-..|-
T Consensus 25 LqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl 71 (81)
T 2jee_A 25 LQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERL 71 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 45678888888888777666655544444444444444444433333
No 17
>2lf8_A Transcription factor ETV6; auto-inhibition; NMR {Mus musculus}
Probab=76.12 E-value=0.66 Score=39.83 Aligned_cols=58 Identities=14% Similarity=0.318 Sum_probs=40.8
Q ss_pred HHHHHhccCCCCCCceEEcCCC-CeEEEecCchhhhhhccc-ccCCCChhhHhhhhccCc
Q 017908 17 SKIYDMVEDPSTNDIVSWSSSN-NSFIVWKVAEFSRDLLPK-YFKHSNFSSFVRQLNTYG 74 (364)
Q Consensus 17 ~KLy~mLed~~~~~IIsWs~~G-~SFvI~d~~~F~k~VLP~-yFkhsnfsSFvRQLN~YG 74 (364)
.=|.++|+|+++.++|+|...+ .-|.+.|+++.++--=.+ -=+..||...-|-|..|-
T Consensus 9 qFLleLL~d~~~~~~I~Wt~k~~geFklvdpe~VArlWG~rKnkp~MnYeKLSRALRyYY 68 (128)
T 2lf8_A 9 DYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHYY 68 (128)
Confidence 4467889999999999998754 589999998776542111 112356777777777663
No 18
>1pue_E Protein (transcription factor PU.1 (TF PU.1)); complex (transcription regulating/DNA), oncogene, transforming protein, DNA- binding, activator; HET: DNA; 2.10A {Mus musculus} SCOP: a.4.5.21
Probab=73.25 E-value=1.4 Score=35.62 Aligned_cols=69 Identities=16% Similarity=0.355 Sum_probs=48.1
Q ss_pred HHHHHhccCCCCCCceEEcCC-CCeEEEe--cCchhhhhhccc--ccCCCChhhHhhhhccCc----eeeeCCCcceec
Q 017908 17 SKIYDMVEDPSTNDIVSWSSS-NNSFIVW--KVAEFSRDLLPK--YFKHSNFSSFVRQLNTYG----FRKVDPDRYEFA 86 (364)
Q Consensus 17 ~KLy~mLed~~~~~IIsWs~~-G~SFvI~--d~~~F~k~VLP~--yFkhsnfsSFvRQLN~YG----FrKv~~d~~eF~ 86 (364)
.=|.++|+|+++.++|+|... ..-|-+. |+++.++--=.+ .=+.-||...-|-|..|- -+||. .+..|.
T Consensus 6 qFL~~LL~d~~~~~~I~W~~~~~g~Fk~~~~~~e~VArlWG~rK~Nk~~MnYeKlSRaLRyYY~~~ii~Kv~-~r~vY~ 83 (89)
T 1pue_E 6 QFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYEKMARALRNYGKTGEVKKVK-KKLTYQ 83 (89)
T ss_dssp HHHHHHHHHTCCTTTEEEEETTTTEEEECTTTHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHHSSEEECS-STTEEE
T ss_pred HHHHHHhcCcccCCceEeecCCCcEEEEecCChHHHHHHhhcccCCCCCcCHHHHHHHHHHHHHcCceeecc-ceEEEe
Confidence 446788999999999999864 4678775 677777653222 123678999999998873 24555 455554
No 19
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=71.42 E-value=5.6 Score=26.58 Aligned_cols=24 Identities=38% Similarity=0.437 Sum_probs=22.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQ 156 (364)
|+.+++.|-.++..|..|+.+|+.
T Consensus 5 LE~kVEeLl~~n~~Le~EV~RLk~ 28 (33)
T 3m48_A 5 LEAKVEELLSKNWNLENEVARLKK 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHH
Confidence 788999999999999999999986
No 20
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=70.17 E-value=6 Score=26.87 Aligned_cols=26 Identities=31% Similarity=0.411 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQQ 158 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQqQ 158 (364)
|+.++++|...+..|..|+.+||...
T Consensus 6 LE~KVEeLl~~~~~Le~eV~RLk~ll 31 (36)
T 1kd8_B 6 LKAKVEELKSKLWHLKNKVARLKKKN 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 78899999999999999999998753
No 21
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=68.45 E-value=12 Score=27.68 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=24.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQL 165 (364)
Q Consensus 132 ~LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qL 165 (364)
.|+.+++.|..+|..|..|+..|+++...+...|
T Consensus 27 ~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk~~l 60 (63)
T 2wt7_A 27 TLQAETDQLEDEKSALQTEIANLLKEKEKLEFIL 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677788888888888888877777666555544
No 22
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=66.27 E-value=12 Score=27.28 Aligned_cols=34 Identities=26% Similarity=0.282 Sum_probs=23.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQL 165 (364)
Q Consensus 132 ~LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qL 165 (364)
.|+.+++.|..+|..|..|+..|+.+...+..+|
T Consensus 26 ~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~~l 59 (61)
T 1t2k_D 26 SLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLL 59 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3667777788888877777777777665555443
No 23
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=66.14 E-value=18 Score=28.64 Aligned_cols=39 Identities=23% Similarity=0.314 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRV 172 (364)
Q Consensus 134 eeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~qrL 172 (364)
..+.+.++.....|.+|..+|++++..-...|..|..++
T Consensus 40 ~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~LLgk~ 78 (81)
T 2jee_A 40 SQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGRM 78 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 334444444445566666666666666666666665543
No 24
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=64.70 E-value=13 Score=26.91 Aligned_cols=31 Identities=13% Similarity=0.296 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 135 EEVEILKRDKNVLMQELVRLRQQQQATDRQL 165 (364)
Q Consensus 135 eEve~LKrD~~~L~qELv~LRQqQq~~~~qL 165 (364)
.+++.|++++..|.+++..|+++.+.+..++
T Consensus 19 ~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l 49 (53)
T 2yy0_A 19 PEIELLRLELAEMKEKYEAIVEENKKLKAKL 49 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777766666666666555555444
No 25
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=64.24 E-value=9.6 Score=25.41 Aligned_cols=25 Identities=12% Similarity=0.235 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQ 157 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQq 157 (364)
|+.++++|-..+..|..|+.+||.-
T Consensus 5 LEdKvEeLl~~~~~Le~EV~RLk~l 29 (33)
T 3c3g_A 5 IEXKLXEIXSKXYHXENXLARIKXL 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 6889999999999999999999863
No 26
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=62.88 E-value=10 Score=25.37 Aligned_cols=25 Identities=16% Similarity=0.222 Sum_probs=22.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQ 157 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQq 157 (364)
|+.+++.|-.++..|..|+.+||.-
T Consensus 6 LEdKVEeLl~~~~~Le~EV~RLk~l 30 (34)
T 3c3f_A 6 IEXKLEXILSXLYHXENEXARIXKL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 6889999999999999999999863
No 27
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=62.81 E-value=10 Score=25.41 Aligned_cols=24 Identities=21% Similarity=0.339 Sum_probs=22.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQ 156 (364)
|+++++.|-..+..|..|+.+||.
T Consensus 6 LEdKVEeLl~~n~~Le~EV~RLk~ 29 (34)
T 1uo4_A 6 IEDKGEEILSKLYHIENELARIKK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHH
Confidence 788999999999999999999986
No 28
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=62.49 E-value=11 Score=25.34 Aligned_cols=25 Identities=32% Similarity=0.382 Sum_probs=22.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQ 157 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQq 157 (364)
|+.+++.|-.+++.|..|+.+||.-
T Consensus 6 LE~kVEeLl~~n~~Le~eV~rLk~l 30 (34)
T 2oxj_A 6 LEXKVXELLXKNXHLEXEVXRLKXL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 6889999999999999999998863
No 29
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=61.64 E-value=18 Score=24.53 Aligned_cols=28 Identities=32% Similarity=0.414 Sum_probs=23.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 132 GLEEEVEILKRDKNVLMQELVRLRQQQQ 159 (364)
Q Consensus 132 ~LeeEve~LKrD~~~L~qELv~LRQqQq 159 (364)
.|+.+++.|-.++..|..|+.+||...-
T Consensus 5 QLE~kVEeLl~~~~~Le~EV~RL~~ll~ 32 (36)
T 1kd8_A 5 QLEAEVEEIESEVWHLENEVARLEKENA 32 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 3788999999999999999999987543
No 30
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=60.33 E-value=12 Score=25.07 Aligned_cols=25 Identities=20% Similarity=0.434 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQ 157 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQq 157 (364)
|+.+++.|-..+..|..|+.+||.-
T Consensus 6 LEdKvEeLl~~~~~L~~EV~RLk~l 30 (34)
T 2bni_A 6 IEDKLEEILSKGHHICNELARIKKL 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHH
Confidence 6889999999999999999999863
No 31
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=59.42 E-value=17 Score=26.30 Aligned_cols=29 Identities=14% Similarity=0.263 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 143 DKNVLMQELVRLRQQQQATDRQLHTVGQR 171 (364)
Q Consensus 143 D~~~L~qELv~LRQqQq~~~~qLq~L~qr 171 (364)
|.+.|.+|+..||++...+..++..+..+
T Consensus 20 d~eaLk~E~~eLk~k~~~L~~~~~el~~~ 48 (53)
T 2yy0_A 20 EIELLRLELAEMKEKYEAIVEENKKLKAK 48 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555554444444444443
No 32
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=59.35 E-value=13 Score=24.92 Aligned_cols=25 Identities=28% Similarity=0.359 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQ 157 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQq 157 (364)
|+.++++|-..+..|..|+.+|+.-
T Consensus 6 LEdkVEeLl~~~~~Le~eV~RL~~l 30 (34)
T 2hy6_A 6 LADAVEELASANYHLANAVARLAKA 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 6889999999999999999999863
No 33
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=59.15 E-value=15 Score=29.35 Aligned_cols=34 Identities=12% Similarity=0.186 Sum_probs=20.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLH 166 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq 166 (364)
+..+++.|.++|..|..+|..|+++...+...|.
T Consensus 41 ~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~ll~ 74 (87)
T 1hjb_A 41 TQHKVLELTAENERLQKKVEQLSRELSTLRNLFK 74 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666666666666666666655555444443
No 34
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=59.05 E-value=28 Score=27.45 Aligned_cols=32 Identities=25% Similarity=0.221 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 139 ILKRDKNVLMQELVRLRQQQQATDRQLHTVGQ 170 (364)
Q Consensus 139 ~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~q 170 (364)
.|....+.|.+||.+||-+.+...++|..|.+
T Consensus 24 ~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~ 55 (83)
T 2xdj_A 24 QLQQQLSDNQSDIDSLRGQIQENQYQLNQVVE 55 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 44555566666666666666666666665543
No 35
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=57.11 E-value=15 Score=24.45 Aligned_cols=24 Identities=21% Similarity=0.196 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQ 156 (364)
|+.++++|-..+..|..|+.+|+.
T Consensus 5 LEdKVEell~~~~~le~EV~Rl~~ 28 (33)
T 2wq1_A 5 LEDKIEENTSKIYHNTNEIARNTK 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHH
Confidence 688899999999999999999876
No 36
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=55.29 E-value=58 Score=23.73 Aligned_cols=40 Identities=20% Similarity=0.277 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 138 EILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQ 177 (364)
Q Consensus 138 e~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~qrLq~mEq 177 (364)
++|-++.+.|..|...||++.+...++|..|...-.+|+.
T Consensus 6 dQL~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~mKe 45 (54)
T 1deb_A 6 DQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKE 45 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHH
Confidence 4455555555666666666666777777777665555553
No 37
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=53.89 E-value=24 Score=26.09 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=20.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQ 164 (364)
Q Consensus 132 ~LeeEve~LKrD~~~L~qELv~LRQqQq~~~~q 164 (364)
.|+.+++.|+.+|..|..++..|+.+.+.+...
T Consensus 27 ~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~l 59 (63)
T 1ci6_A 27 ALTGECKELEKKNEALKERADSLAKEIQYLKDL 59 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666677777776666666666655444433
No 38
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=52.62 E-value=60 Score=27.61 Aligned_cols=44 Identities=9% Similarity=0.252 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQ 177 (364)
Q Consensus 134 eeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~qrLq~mEq 177 (364)
+.+++.+.++...|..|++.++-+.....+.+..+...+..++.
T Consensus 81 ~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~ 124 (138)
T 3hnw_A 81 SLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQK 124 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444445555555554555555555555555544443
No 39
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=51.57 E-value=12 Score=27.52 Aligned_cols=34 Identities=29% Similarity=0.356 Sum_probs=22.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQL 165 (364)
Q Consensus 132 ~LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qL 165 (364)
.|+.+++.|..+|..|..++..|+.+...+...|
T Consensus 26 ~Le~~v~~L~~~n~~L~~~v~~L~~e~~~Lk~~l 59 (62)
T 1jnm_A 26 RLEEKVKTLKAQNSELASTANMLREQVAQLKQKV 59 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677778888888888888777777655444433
No 40
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=50.22 E-value=35 Score=26.45 Aligned_cols=45 Identities=11% Similarity=0.133 Sum_probs=28.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (364)
Q Consensus 132 ~LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~qrLq~mE 176 (364)
.|+.++..+.+..+.|-+.|++..++...+..++..|.+|+..++
T Consensus 18 ~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~~~~ 62 (78)
T 3efg_A 18 ELETRLSFQEQALTELSEALADARLTGARNAELIRHLLEDLGKVR 62 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 355556666666677777777777777777777777777776654
No 41
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=50.13 E-value=24 Score=22.97 Aligned_cols=23 Identities=30% Similarity=0.499 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 017908 134 EEEVEILKRDKNVLMQELVRLRQ 156 (364)
Q Consensus 134 eeEve~LKrD~~~L~qELv~LRQ 156 (364)
..|+..||++...|.-|+..|+|
T Consensus 8 kqeiaalkkeiaalkfeiaalkq 30 (33)
T 4dzn_A 8 KQEIAALKKEIAALKFEIAALKQ 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc
Confidence 34444444444444444444443
No 42
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=49.79 E-value=36 Score=27.36 Aligned_cols=38 Identities=18% Similarity=0.295 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 136 EVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQ 173 (364)
Q Consensus 136 Eve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~qrLq 173 (364)
+...|..++..|+.|+..|+++...+...+..+.++++
T Consensus 49 q~~~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~ 86 (90)
T 2wt7_B 49 QKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSE 86 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666666666666666666666666666655554
No 43
>3e98_A GAF domain of unknown function; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.43A {Pseudomonas aeruginosa}
Probab=49.75 E-value=24 Score=32.67 Aligned_cols=68 Identities=12% Similarity=0.130 Sum_probs=22.9
Q ss_pred ecCCCcccCCcccchhhhccCCCcccCCCCcccccCCCcchhhccccChHHHHHHHHHHHHHHHHHHHHHHH---HHHHH
Q 017908 85 FANEGFLRGQKHLLKSISRRKPAQVHGQQQPKLQNSSVGACVEVGKYGLEEEVEILKRDKNVLMQELVRLRQ---QQQAT 161 (364)
Q Consensus 85 F~H~~F~Rg~~~LL~~IkRkk~~~~~~~~q~~~~~ss~~a~~evg~~~LeeEve~LKrD~~~L~qELv~LRQ---qQq~~ 161 (364)
-.||.|.-.+++||..++=.-+..+. -..+ +-++++|+..+..|..++..|-. +...+
T Consensus 41 ~~~PdFf~~~~~Ll~~L~lph~~~~a------------VSL~-------erQ~~~LR~r~~~Le~~L~~Li~~A~~Ne~l 101 (252)
T 3e98_A 41 SQHPEFFVEHDELIPELRIPHQPGDA------------VSLV-------ERQVRLLRERNIEMRHRLSQLMDVARENDRL 101 (252)
T ss_dssp --------------------------------------CHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCHHHhhCHHHHHhCCCCCCCCCc------------ccHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37999999999999988643322110 0111 34567777777777777655554 44455
Q ss_pred HHHHHHHHHH
Q 017908 162 DRQLHTVGQR 171 (364)
Q Consensus 162 ~~qLq~L~qr 171 (364)
-++++.+.-+
T Consensus 102 ~~~~~~l~l~ 111 (252)
T 3e98_A 102 FDKTRRLVLD 111 (252)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555555443
No 44
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=49.04 E-value=24 Score=23.64 Aligned_cols=24 Identities=17% Similarity=0.234 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQ 156 (364)
++.++++|-..+..|..|+.+|+.
T Consensus 6 ledKvEel~~~~~~l~nEv~Rl~~ 29 (34)
T 2r2v_A 6 VADKLEEVASKLYHNANELARVAK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHH
Confidence 678899999999999999999876
No 45
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=45.26 E-value=17 Score=28.34 Aligned_cols=29 Identities=14% Similarity=0.206 Sum_probs=15.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQQQAT 161 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQqQq~~ 161 (364)
+..+++.|.++|..|..+|..|+++...+
T Consensus 41 ~~~r~~~L~~eN~~L~~~v~~L~~E~~~L 69 (78)
T 1gu4_A 41 TQHKVLELTAENERLQKKVEQLSRELSTL 69 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566666665555555555444333
No 46
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=44.48 E-value=19 Score=26.79 Aligned_cols=26 Identities=35% Similarity=0.436 Sum_probs=20.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 132 GLEEEVEILKRDKNVLMQELVRLRQQ 157 (364)
Q Consensus 132 ~LeeEve~LKrD~~~L~qELv~LRQq 157 (364)
.|+.+++.|+.+|..|..|+..|+++
T Consensus 34 ~Le~~v~~L~~eN~~L~~ev~~Lr~~ 59 (63)
T 2dgc_A 34 QLEDKVEELLSKNYHLENEVARLKKL 59 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777888888888888888887764
No 47
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=43.03 E-value=44 Score=26.23 Aligned_cols=33 Identities=15% Similarity=0.264 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 136 EVEILKRDKNVLMQELVRLRQQQQATDRQLHTV 168 (364)
Q Consensus 136 Eve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L 168 (364)
-+..|+..+..+..|+..|+++++.+..+|+.|
T Consensus 53 YI~~L~~~~~~l~~~~~~L~~~n~~L~~rl~~L 85 (88)
T 1nkp_A 53 YILSVQAEEQKLISEEDLLRKRREQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 467777788888888888888888887777765
No 48
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=42.79 E-value=27 Score=26.72 Aligned_cols=31 Identities=16% Similarity=0.407 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 137 VEILKRDKNVLMQELVRLRQQQQATDRQLHT 167 (364)
Q Consensus 137 ve~LKrD~~~L~qELv~LRQqQq~~~~qLq~ 167 (364)
+..|+..+..|..|+..|+++...+..+|..
T Consensus 49 I~~L~~~~~~l~~e~~~L~~~~~~L~~~l~~ 79 (83)
T 1nkp_B 49 IQYMRRKNHTHQQDIDDLKRQNALLEQQVRA 79 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666666777777777766666666553
No 49
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=41.35 E-value=59 Score=21.13 Aligned_cols=20 Identities=30% Similarity=0.529 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 017908 136 EVEILKRDKNVLMQELVRLR 155 (364)
Q Consensus 136 Eve~LKrD~~~L~qELv~LR 155 (364)
|+..||++...|..|+..|+
T Consensus 3 eiaalkqeiaalkkeiaalk 22 (33)
T 4dzn_A 3 EIAALKQEIAALKKEIAALK 22 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 34455555555544444443
No 50
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=40.81 E-value=1.3e+02 Score=23.56 Aligned_cols=41 Identities=17% Similarity=0.194 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 017908 144 KNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMIN 184 (364)
Q Consensus 144 ~~~L~qELv~LRQqQq~~~~qLq~L~qrLq~mEqRQqqmms 184 (364)
.-.|.+.+..|+++...+..++..+.-.+..+.+||+.+..
T Consensus 22 ~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQrd~Y~ 62 (83)
T 2xdj_A 22 LTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILL 62 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 34566677777777777888888888888889999987764
No 51
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=38.28 E-value=1.4e+02 Score=24.82 Aligned_cols=36 Identities=22% Similarity=0.198 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVG 169 (364)
Q Consensus 134 eeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~ 169 (364)
+..++.|+++.+.|..|+.+++.+.+....+|..=+
T Consensus 14 D~~Ie~Lkreie~lk~ele~l~~E~q~~v~ql~~~i 49 (120)
T 3i00_A 14 DHLIERLYREISGLKAQLENMKTESQRVVLQLKGHV 49 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456889999999999999999887776666665433
No 52
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=38.18 E-value=1.5e+02 Score=23.56 Aligned_cols=41 Identities=22% Similarity=0.375 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQ 173 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~qrLq 173 (364)
+..++..|+.+-..|.+||..|.++...+...|..+..-..
T Consensus 9 l~~eL~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~ 49 (96)
T 3q8t_A 9 LQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAE 49 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 56677788888888888888888777777777776655333
No 53
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=36.82 E-value=45 Score=25.80 Aligned_cols=31 Identities=19% Similarity=0.377 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 136 EVEILKRDKNVLMQELVRLRQQQQATDRQLH 166 (364)
Q Consensus 136 Eve~LKrD~~~L~qELv~LRQqQq~~~~qLq 166 (364)
-|..|+.+...|..|...|+.++..+..+|.
T Consensus 48 yI~~L~~~~~~l~~e~~~L~~e~~~L~~~L~ 78 (80)
T 1nlw_A 48 HIKKLEDSDRKAVHQIDQLQREQRHLKRQLE 78 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3567777777777787788777777766665
No 54
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=35.97 E-value=56 Score=21.90 Aligned_cols=17 Identities=29% Similarity=0.583 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHHHH
Q 017908 135 EEVEILKRDKNVLMQEL 151 (364)
Q Consensus 135 eEve~LKrD~~~L~qEL 151 (364)
.+++.||+.|..|.+++
T Consensus 14 qDIddlkrQN~~Le~Qi 30 (34)
T 1a93_B 14 QDIDDLKRQNALLEQQV 30 (34)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH
Confidence 34455555555444443
No 55
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=35.97 E-value=1.2e+02 Score=21.98 Aligned_cols=38 Identities=24% Similarity=0.259 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQ 170 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~q 170 (364)
|-.+++.||++|..|.+|+..--.+...+++.--.|..
T Consensus 8 L~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~mKe 45 (54)
T 1deb_A 8 LLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKE 45 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHH
Confidence 45688999999999999998777766666665544443
No 56
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=34.54 E-value=47 Score=25.35 Aligned_cols=33 Identities=30% Similarity=0.306 Sum_probs=19.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQL 165 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qL 165 (364)
|+.++..|...+..|..|...|+++...+...+
T Consensus 34 LE~~v~~le~~~~~l~~en~~Lr~~i~~L~~El 66 (70)
T 1gd2_E 34 LETQVVTLKELHSSTTLENDQLRQKVRQLEEEL 66 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555666666666666666666666555544444
No 57
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=33.90 E-value=1.4e+02 Score=26.20 Aligned_cols=43 Identities=21% Similarity=0.187 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Q 017908 135 EEVEILKRDKNVLMQELVRLRQQQQATDRQL---HTVGQRVQVMEQ 177 (364)
Q Consensus 135 eEve~LKrD~~~L~qELv~LRQqQq~~~~qL---q~L~qrLq~mEq 177 (364)
.++++|+.++..++..+.+-+++.|.+..|. ++|++|.+.+++
T Consensus 5 qe~~~Le~Ek~~~~~rI~~K~~~LqeL~~Q~vafknLv~RN~~~e~ 50 (155)
T 2aze_A 5 QECQNLEVERQRRLERIKQKQSQLQELILQQIAFKNLVQRNRHAEQ 50 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5677888887777766666555555444443 455666655554
No 58
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=33.86 E-value=62 Score=25.96 Aligned_cols=37 Identities=27% Similarity=0.300 Sum_probs=23.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTV 168 (364)
Q Consensus 132 ~LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L 168 (364)
.|+.++..|..+.+.|.+|+.++.+....+...++.|
T Consensus 52 ~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~L 88 (90)
T 2wt7_B 52 HLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEKL 88 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4666666666666666666666666666655555443
No 59
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=33.37 E-value=1.7e+02 Score=29.35 Aligned_cols=65 Identities=12% Similarity=0.253 Sum_probs=40.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHH-HHHhhcccccccccCCCCc
Q 017908 132 GLEEEVEILKRDKNVLMQELVRLR----------QQQQATDRQLHTVGQRVQVMEQ-RQQQMINLSTFLIDNIPSA 196 (364)
Q Consensus 132 ~LeeEve~LKrD~~~L~qELv~LR----------QqQq~~~~qLq~L~qrLq~mEq-RQqqmms~~~~ll~~~~~~ 196 (364)
.+..+++.|+.+.+.+-+++..++ .+-..+..++..|...+..++. .+..+++.++++-..+|-+
T Consensus 42 ~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipN~~~~~vP~g 117 (455)
T 2dq0_A 42 TKLKEINRLRHERNKIAVEIGKRRKKGEPVDELLAKSREIVKRIGELENEVEELKKKIDYYLWRLPNITHPSVPVG 117 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCTTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccCCCC
Confidence 355677888888888888876543 3444555556666666665553 3444455666666666655
No 60
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=32.90 E-value=1.7e+02 Score=23.12 Aligned_cols=30 Identities=23% Similarity=0.313 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 143 DKNVLMQELVRLRQQQQATDRQLHTVGQRV 172 (364)
Q Consensus 143 D~~~L~qELv~LRQqQq~~~~qLq~L~qrL 172 (364)
-++.+..||.+.|--++.++.+|+.-..+.
T Consensus 25 AKQ~i~EELs~vr~~ni~~eskL~eae~rn 54 (81)
T 1wt6_A 25 TRQSLSREMEAIRTDNQNFASQLREAEARN 54 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555566555555555555555444333
No 61
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=32.82 E-value=1.2e+02 Score=29.45 Aligned_cols=46 Identities=17% Similarity=0.181 Sum_probs=26.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQR 178 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~qrLq~mEqR 178 (364)
|.+++.+|.........++..|+.+...++.+|+.|.+.|..++.+
T Consensus 10 ~~~~~~~~e~~i~~~~~~i~~L~~~l~~~~~~i~~l~~~i~~l~~~ 55 (323)
T 1lwu_C 10 ILEEVRILEQIGVSHDAQIQELSEMWRVNQQFVTRLQQQLVDIRQT 55 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555444445556666666666666666666666555544
No 62
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=32.21 E-value=1.8e+02 Score=29.71 Aligned_cols=65 Identities=5% Similarity=0.162 Sum_probs=39.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHH-HHhhcccccccccCCCCc
Q 017908 132 GLEEEVEILKRDKNVLMQELVRLRQ----------QQQATDRQLHTVGQRVQVMEQR-QQQMINLSTFLIDNIPSA 196 (364)
Q Consensus 132 ~LeeEve~LKrD~~~L~qELv~LRQ----------qQq~~~~qLq~L~qrLq~mEqR-Qqqmms~~~~ll~~~~~~ 196 (364)
.+..+++.|+.+.+.+-+++..+++ +...+..+|..|...+..++.. +..+++.++++-..+|-+
T Consensus 44 ~~~~~~~~l~~~rn~~sk~i~~~k~~~~~~~~l~~~~~~l~~~i~~le~~~~~~~~~~~~~l~~iPN~~~~~vP~g 119 (485)
T 3qne_A 44 KLRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRSKINQVGNIVHESVVDS 119 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCTTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccCCCC
Confidence 3556778888888888888765443 4445555555666666655543 344444556655666644
No 63
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=31.78 E-value=1.8e+02 Score=22.56 Aligned_cols=47 Identities=21% Similarity=0.388 Sum_probs=35.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017908 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQ 181 (364)
Q Consensus 132 ~LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~qrLq~mEqRQqq 181 (364)
.+++.+++|....+.|.--+++|--++...+.. |.+|+..+|.+=+.
T Consensus 4 dlEEKv~~LE~sld~LQTrfARLLaEy~ssQ~K---LKqRit~LE~~~~~ 50 (74)
T 3swf_A 4 GLEEKVTRMESSVDLLQTRFARILAEYESMQQK---LKQRLTKVEKFLKP 50 (74)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhcc
Confidence 578899999999998888888887766655554 45788888876544
No 64
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=30.83 E-value=42 Score=21.11 Aligned_cols=16 Identities=38% Similarity=0.428 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHHH
Q 017908 139 ILKRDKNVLMQELVRL 154 (364)
Q Consensus 139 ~LKrD~~~L~qELv~L 154 (364)
+||+.+.-|.||+..|
T Consensus 4 rlkqknarlkqeiaal 19 (28)
T 3ra3_B 4 RLKQKNARLKQEIAAL 19 (28)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHH
Confidence 4555555444444443
No 65
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=30.72 E-value=1.4e+02 Score=29.70 Aligned_cols=19 Identities=21% Similarity=0.198 Sum_probs=7.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 017908 138 EILKRDKNVLMQELVRLRQ 156 (364)
Q Consensus 138 e~LKrD~~~L~qELv~LRQ 156 (364)
..++.+.+.+..++.+.++
T Consensus 512 ~~~~~~~~~~~~~~~~~~~ 530 (597)
T 3oja_B 512 THLKERQAFKLRETQARRT 530 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhhhHHHHHHHHH
Confidence 3333333333333333333
No 66
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=29.58 E-value=49 Score=23.85 Aligned_cols=24 Identities=33% Similarity=0.619 Sum_probs=14.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQ 156 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQ 156 (364)
|+.++..|..+|..|..++..|++
T Consensus 27 LE~~v~~L~~eN~~L~~~~~~L~~ 50 (55)
T 1dh3_A 27 LENRVAVLENQNKTLIEELKALKD 50 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555666666666666666555544
No 67
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=29.01 E-value=2.3e+02 Score=23.27 Aligned_cols=36 Identities=14% Similarity=0.191 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVG 169 (364)
Q Consensus 134 eeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~ 169 (364)
..++.+|++..+.|.-|+..++.+...++..|..+.
T Consensus 35 k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e 70 (129)
T 3tnu_B 35 KHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAE 70 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 466777777777777777776666555555555443
No 68
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=28.33 E-value=1.5e+02 Score=20.61 Aligned_cols=25 Identities=28% Similarity=0.461 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 150 ELVRLRQQQQATDRQLHTVGQRVQV 174 (364)
Q Consensus 150 ELv~LRQqQq~~~~qLq~L~qrLq~ 174 (364)
|+..|.-+.|.+++.+..|...++.
T Consensus 21 elaaleselqalekklaalksklqa 45 (48)
T 1g6u_A 21 ELAALESELQALEKKLAALKSKLQA 45 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555556666655555554
No 69
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=28.08 E-value=1.7e+02 Score=28.54 Aligned_cols=42 Identities=7% Similarity=0.021 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 136 EVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQ 177 (364)
Q Consensus 136 Eve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~qrLq~mEq 177 (364)
+.++++++.+....|+.+++++...++..+..+...+..+.+
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (487)
T 3oja_A 429 VQNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALASANA 470 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhcchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhccc
Confidence 334445555555555555555555555555555544444443
No 70
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=27.92 E-value=2.6e+02 Score=23.13 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 144 KNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQR 178 (364)
Q Consensus 144 ~~~L~qELv~LRQqQq~~~~qLq~L~qrLq~mEqR 178 (364)
.+.|..|+..||.....+...|..|.+....+|..
T Consensus 37 ~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~ 71 (111)
T 2v66_B 37 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERA 71 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHH
Confidence 34566677777777777777777666655555543
No 71
>4aj5_K Spindle and kinetochore-associated protein 2; cell cycle, SKA complex, mitosis, cell division, kinetochore microtubule attachment; 3.32A {Homo sapiens}
Probab=27.79 E-value=2.8e+02 Score=23.46 Aligned_cols=50 Identities=16% Similarity=0.240 Sum_probs=37.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017908 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQ 181 (364)
Q Consensus 132 ~LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~qrLq~mEqRQqq 181 (364)
.|-+++..+|.++..|.-++..+--+|+.+...+.+......+|-||-|+
T Consensus 47 ~Ll~~LsaIk~ry~~L~~q~~~iaaeQke~~d~ir~tL~~tm~miQ~LQ~ 96 (123)
T 4aj5_K 47 TLLKELSVIKSRYQTLYARFKPVAVEQKESKSRICATVKKTMNMIQKLQK 96 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36678899999999999888888778888888887666555555555443
No 72
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=27.64 E-value=1.6e+02 Score=21.71 Aligned_cols=35 Identities=14% Similarity=0.210 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTV 168 (364)
Q Consensus 134 eeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L 168 (364)
+.++.+||.-|..|...+..|..+.-..+..+..|
T Consensus 10 e~q~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL 44 (58)
T 3a2a_A 10 ERQLLRLKQMNVQLAAKIQHLEFSCSEKEQEIERL 44 (58)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888888777777766655555555433
No 73
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=27.49 E-value=1.7e+02 Score=20.97 Aligned_cols=36 Identities=28% Similarity=0.369 Sum_probs=19.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTV 168 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L 168 (364)
+..++..|...|..|..-+...|++...+..+|..|
T Consensus 14 l~~~l~~L~~rN~rL~~~L~~AR~el~~Lkeele~L 49 (51)
T 3m91_A 14 LEARIDSLAARNSKLMETLKEARQQLLALREEVDRL 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344455555555555655566666555555555443
No 74
>3cue_D Transport protein particle 22 kDa subunit; membrane traffic, GEF, tethering complex, RAB activation, GU nucleotide exchange factor; HET: PLM; 3.70A {Saccharomyces cerevisiae}
Probab=27.16 E-value=41 Score=30.20 Aligned_cols=61 Identities=18% Similarity=0.309 Sum_probs=45.1
Q ss_pred cHHH-HHHHhccCCCCCCceEEcCCCCeEEE-ecCchhhhhh-ccccc-CCCChhhHhh-----hhccCce
Q 017908 14 PFLS-KIYDMVEDPSTNDIVSWSSSNNSFIV-WKVAEFSRDL-LPKYF-KHSNFSSFVR-----QLNTYGF 75 (364)
Q Consensus 14 ~Fl~-KLy~mLed~~~~~IIsWs~~G~SFvI-~d~~~F~k~V-LP~yF-khsnfsSFvR-----QLN~YGF 75 (364)
.|+. .+|.++=.-. .+...|+++++.|+| .|..-+..-| +|... ..-+|+.|+- -|.+-||
T Consensus 88 ~fI~k~~Wk~lfgk~-~d~L~~t~~~~~y~L~~d~nPl~~fv~lP~~~~~~l~y~~f~cGIIrGaL~~~g~ 157 (193)
T 3cue_D 88 EVLSKCAFKIFLNIT-PNITNWSHNKDTFSLILDENPLADFVELPMDAMKSLWYSNILCGVLKGSLEMVQL 157 (193)
T ss_dssp HHHHHHHHHHHSSCC-CCCBCCCTTSCCCBCCBSCCGGGSSCCCCTTTTTSCCTTHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCC-CccceecCCCCEEEEEECCchhhhheeCcHhHHhCcchhhhHHHHHHHHHHhCCC
Confidence 5664 4787777654 456789999999999 7776655544 78776 6778999984 4678888
No 75
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=27.11 E-value=2.7e+02 Score=28.39 Aligned_cols=24 Identities=21% Similarity=0.376 Sum_probs=16.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHH
Q 017908 132 GLEEEVEILKRDKNVLMQELVRLR 155 (364)
Q Consensus 132 ~LeeEve~LKrD~~~L~qELv~LR 155 (364)
.+..+++.|+.+.+.+-+++..++
T Consensus 81 ~~~~~~~~l~~~rn~~sk~i~~~~ 104 (501)
T 1wle_A 81 QLREQIRSLEEEKEAVTEAVRALV 104 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345567777777777777776554
No 76
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=27.00 E-value=2.7e+02 Score=23.02 Aligned_cols=51 Identities=24% Similarity=0.261 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQQMI 183 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~qrLq~mEqRQqqmm 183 (364)
|..++..|+..+..|..-+..|.|....++..-......|..+|.|-.+.|
T Consensus 40 Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~ai 90 (111)
T 2v66_B 40 LEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAI 90 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 556666666666666666666666666666666655556666666554444
No 77
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=26.56 E-value=1.3e+02 Score=29.71 Aligned_cols=35 Identities=17% Similarity=0.218 Sum_probs=21.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHT 167 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~ 167 (364)
++++++.|+++.+.|.+++..++.+.+.+..++..
T Consensus 8 ~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 42 (403)
T 4etp_A 8 LKEKIAALKEKIAALKEKIKDTELGMKELNEILIK 42 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666666666666666666655555555543
No 78
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=26.46 E-value=96 Score=24.28 Aligned_cols=30 Identities=30% Similarity=0.382 Sum_probs=14.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQQQATD 162 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQqQq~~~ 162 (364)
|-.++++|--++.+|..|+..+++-...++
T Consensus 35 LI~rvdELt~E~e~l~~El~s~~~~~~r~~ 64 (77)
T 2w83_C 35 LIAKVDELTCEKDVLQGELEAVKQAKLKLE 64 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 444455555555555555555544333333
No 79
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=26.06 E-value=2e+02 Score=28.45 Aligned_cols=65 Identities=11% Similarity=0.214 Sum_probs=37.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcccccccccCCCCc
Q 017908 132 GLEEEVEILKRDKNVLMQELV--------RLRQQQQATDRQLHTVGQRVQVMEQR-QQQMINLSTFLIDNIPSA 196 (364)
Q Consensus 132 ~LeeEve~LKrD~~~L~qELv--------~LRQqQq~~~~qLq~L~qrLq~mEqR-Qqqmms~~~~ll~~~~~~ 196 (364)
.+..+++.|+.+.+.+-+++. .|+.+-..+..++..+...+..++.. +..+++.++++-..+|-+
T Consensus 39 ~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipN~~~~~vp~g 112 (421)
T 1ses_A 39 ELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEALREKEARLEALLLQVPLPPWPGAPVG 112 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCTTSCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 345567777777777766553 34445555555666666666655543 334444556655666654
No 80
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=25.97 E-value=1.8e+02 Score=20.58 Aligned_cols=36 Identities=17% Similarity=0.348 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVM 175 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~qrLq~m 175 (364)
+..++.+||+|+-.|. ..-|.+++.+.+|...+..+
T Consensus 8 lrkkiarlkkdnlqle-------rdeqnlekiianlrdeiarl 43 (52)
T 3he5_B 8 LRKKIARLKKDNLQLE-------RDEQNLEKIIANLRDEIARL 43 (52)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhhh-------hhHhhHHHHHHHHHHHHHHH
Confidence 3456667777765433 33344555555554444333
No 81
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=25.71 E-value=2e+02 Score=28.19 Aligned_cols=42 Identities=14% Similarity=0.263 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 136 EVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQ 177 (364)
Q Consensus 136 Eve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~qrLq~mEq 177 (364)
+++.|+.+...|.++...+.+..+.++..+..+.+++...+.
T Consensus 4 ~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 45 (403)
T 4etp_A 4 KIAALKEKIAALKEKIAALKEKIKDTELGMKELNEILIKEET 45 (403)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555556666666655555566666555555555443
No 82
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=25.66 E-value=1.8e+02 Score=23.65 Aligned_cols=44 Identities=18% Similarity=0.325 Sum_probs=27.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 132 GLEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVM 175 (364)
Q Consensus 132 ~LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~qrLq~m 175 (364)
.+++-++.|++..+.|...+..+.++...+..++..+...++.+
T Consensus 85 ~~~eA~~~l~~r~~~l~~~~~~l~~~l~~l~~~i~~~~~~l~~~ 128 (133)
T 1fxk_C 85 NFEDAMESIKSQKNELESTLQKMGENLRAITDIMMKLSPQAEEL 128 (133)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666667777777666666666666666666666655555443
No 83
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=25.61 E-value=80 Score=26.34 Aligned_cols=34 Identities=21% Similarity=0.271 Sum_probs=13.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQ 170 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~q 170 (364)
|..+++.||++.+.+ ..|+.+.+.++.+|..+.+
T Consensus 4 l~~~~~~l~~~~~~~----~~l~~~~~~l~~~l~~~~~ 37 (182)
T 3kqg_A 4 LNAQIPELKSDLEKA----SALNTKIRALQGSLENMSK 37 (182)
T ss_dssp ---------CHHHHH----HHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHH
Confidence 456677777776633 4555555555555555444
No 84
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=25.55 E-value=1.7e+02 Score=20.33 Aligned_cols=19 Identities=26% Similarity=0.307 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 017908 148 MQELVRLRQQQQATDRQLH 166 (364)
Q Consensus 148 ~qELv~LRQqQq~~~~qLq 166 (364)
..|+..|.++.-.+...+|
T Consensus 26 eselqalekklaalksklq 44 (48)
T 1g6u_A 26 ESELQALEKKLAALKSKLQ 44 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333
No 85
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=25.41 E-value=1.2e+02 Score=31.53 Aligned_cols=13 Identities=23% Similarity=0.301 Sum_probs=5.3
Q ss_pred HHHHHHHHHHHHH
Q 017908 139 ILKRDKNVLMQEL 151 (364)
Q Consensus 139 ~LKrD~~~L~qEL 151 (364)
+|+|.++.|..+|
T Consensus 114 ELRRrIqyLKekV 126 (562)
T 3ghg_A 114 DLRSRIEVLKRKV 126 (562)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444443
No 86
>2aze_B Transcription factor E2F1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.2
Probab=25.02 E-value=1.5e+02 Score=24.10 Aligned_cols=32 Identities=19% Similarity=0.374 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 145 NVLMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (364)
Q Consensus 145 ~~L~qELv~LRQqQq~~~~qLq~L~qrLq~mE 176 (364)
..|.+|+..|.++-+.++..+..+.+.|+.+.
T Consensus 9 ~~Lk~El~~L~~~E~~LD~~i~~~~~~l~~lt 40 (106)
T 2aze_B 9 EGLTQDLRQLQESEQQLDHLMNICTTQLRLLS 40 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35566666777777777777777777777665
No 87
>3t97_C Nuclear pore glycoprotein P62; nucleoporin, coiled-coil, nuclear pore complex, central TRAN channel, alpha helical proteins, triple helix; 2.80A {Rattus norvegicus}
Probab=24.92 E-value=1.2e+02 Score=22.66 Aligned_cols=23 Identities=22% Similarity=0.379 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 017908 145 NVLMQELVRLRQQQQATDRQLHT 167 (364)
Q Consensus 145 ~~L~qELv~LRQqQq~~~~qLq~ 167 (364)
..|..++.++.+.|+.++++|.+
T Consensus 15 ~~L~~~v~~~e~~Q~~ldq~Ld~ 37 (64)
T 3t97_C 15 TSLHREVEKVKLDQKRLDQELDF 37 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555544
No 88
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=23.76 E-value=2.2e+02 Score=20.83 Aligned_cols=36 Identities=14% Similarity=0.226 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 135 EEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQ 170 (364)
Q Consensus 135 eEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~q 170 (364)
.+...|....+.|.++...|+.+...+...++.|.+
T Consensus 23 ~~~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ 58 (63)
T 1ci6_A 23 AEQEALTGECKELEKKNEALKERADSLAKEIQYLKD 58 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555666666666666666666666666555544
No 89
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=23.46 E-value=1.4e+02 Score=24.32 Aligned_cols=33 Identities=27% Similarity=0.367 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 134 EEEVEILKRDKNVLMQELVRLRQQQQATDRQLH 166 (364)
Q Consensus 134 eeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq 166 (364)
.+++..|++..+.|..|..+|+++...++-+|.
T Consensus 11 ~e~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le 43 (100)
T 1go4_E 11 REEADTLRLKVEELEGERSRLEEEKRMLEAQLE 43 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356777777777777777777777666666654
No 90
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=22.94 E-value=3.6e+02 Score=23.27 Aligned_cols=35 Identities=23% Similarity=0.372 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 136 EVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQ 170 (364)
Q Consensus 136 Eve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~q 170 (364)
++..|++.+..-..|+.+||.....++..+...-+
T Consensus 47 KVDQlqKRn~~HQKEi~~Lrae~~~~QRn~~K~~~ 81 (167)
T 4gkw_A 47 KVDQLQKRNVAHQKEIGKLRAELGTAQRNLEKADQ 81 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHhccHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 56778887777778888888766655555554433
No 91
>3bj4_A Potassium voltage-gated channel subfamily KQT member 1; coiled coil, alternative splicing, deafness, disease mutation, glycoprotein, ION transport; 2.00A {Homo sapiens}
Probab=22.93 E-value=1.6e+02 Score=21.13 Aligned_cols=36 Identities=14% Similarity=0.205 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 145 NVLMQELVRLRQQQQATDRQLHTVGQRVQVMEQRQQ 180 (364)
Q Consensus 145 ~~L~qELv~LRQqQq~~~~qLq~L~qrLq~mEqRQq 180 (364)
..+..-++++.+|...+++.|..|..-+..+-++||
T Consensus 13 ~S~~~Rl~rVE~qV~~md~KLd~l~~~~~~~l~~~~ 48 (49)
T 3bj4_A 13 NTIGARLNRVEDKVTQLDQRLALITDMLHQLLSLHG 48 (49)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 346667788888888999999988887777666654
No 92
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=22.70 E-value=2.9e+02 Score=25.04 Aligned_cols=25 Identities=8% Similarity=0.125 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc
Q 017908 160 ATDRQLHTVGQRVQVMEQRQQQMIN 184 (364)
Q Consensus 160 ~~~~qLq~L~qrLq~mEqRQqqmms 184 (364)
.+.+.|..+..++..+|.+...+|.
T Consensus 94 aL~kEie~~~~~i~~lE~eile~~e 118 (256)
T 3na7_A 94 SLNIEEDIAKERSNQANREIENLQN 118 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444444444444444443
No 93
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=21.86 E-value=2.2e+02 Score=23.52 Aligned_cols=31 Identities=23% Similarity=0.245 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 135 EEVEILKRDKNVLMQELVRLRQQQQATDRQL 165 (364)
Q Consensus 135 eEve~LKrD~~~L~qELv~LRQqQq~~~~qL 165 (364)
.++.+|++..+.|.-|+..++.+...++..|
T Consensus 38 ~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l 68 (131)
T 3tnu_A 38 SEISELRRTMQNLEIELQSQLSMKASLENSL 68 (131)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 3444555555555555554444433333333
No 94
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=21.30 E-value=2.5e+02 Score=22.22 Aligned_cols=19 Identities=26% Similarity=0.419 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 017908 138 EILKRDKNVLMQELVRLRQ 156 (364)
Q Consensus 138 e~LKrD~~~L~qELv~LRQ 156 (364)
+.|....+.|..|+..|++
T Consensus 49 ~~Lh~~ie~l~eEi~~lk~ 67 (83)
T 1uii_A 49 EKLHKEIEQKDNEIARLKK 67 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444
No 95
>2xu6_A MDV1 coiled coil; protein binding, mitochondrial outer membrane, adapter prote organelle division; 2.70A {Saccharomyces cerevisiae}
Probab=21.05 E-value=1.7e+02 Score=22.67 Aligned_cols=43 Identities=26% Similarity=0.477 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 133 LEEEVEILKRDKNVLMQELVRLRQQQQATDRQLHTVGQRVQVM 175 (364)
Q Consensus 133 LeeEve~LKrD~~~L~qELv~LRQqQq~~~~qLq~L~qrLq~m 175 (364)
+..+++.|+.-.+.+..-++.+.|..-.+++.|..+..|+..+
T Consensus 26 ID~Ki~nL~~mR~ivldRlA~lEqdE~~LE~~l~~i~~rle~~ 68 (72)
T 2xu6_A 26 IEVEVENLRQKKEKLLGKIANIEQNQLMLEDNLKQIDDRLDFL 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 4445666666666666666666666666666666665555443
No 96
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=20.26 E-value=3.8e+02 Score=24.00 Aligned_cols=33 Identities=18% Similarity=0.251 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017908 144 KNVLMQELVRLRQQQQATDRQLHTVGQRVQVME 176 (364)
Q Consensus 144 ~~~L~qELv~LRQqQq~~~~qLq~L~qrLq~mE 176 (364)
.+.|..|+..|+.....+..+|..|.+....+|
T Consensus 90 ~~~Lq~el~~l~~~~~~l~~~ireLEq~NDdlE 122 (189)
T 2v71_A 90 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLE 122 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 334444444444444444444444444433333
Done!