BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017909
(364 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 338 bits (866), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 175/375 (46%), Positives = 239/375 (63%), Gaps = 19/375 (5%)
Query: 5 VEPPNGMKSRGKHYYTM-------------WQTLFEIDTKYVPIKPIGRGAYGVVCSSIN 51
EPP +K+ H + F++ +Y I+ IG GAYGVV S+
Sbjct: 16 AEPPGPVKAEPAHTAASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARR 75
Query: 52 RETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVY 110
R T ++VAIKKI N F+ +A RTLREL +L+H KHDN+IA+KD++ PT FK VY
Sbjct: 76 RLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY 135
Query: 111 LVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANC 170
+V +LM++DLHQII SSQ L+ +H +YF++QLLRGLKY+HSA ++HRDLKP NLLVN NC
Sbjct: 136 VVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENC 195
Query: 171 DLKICDFGLAR---TSRGNEQ-FMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAE 226
+LKI DFG+AR TS Q FMTEYV TRWYRAPEL+L Y +ID+WSVGCIF E
Sbjct: 196 ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGE 255
Query: 227 ILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYP 286
+L R+ +FPG ++QL+LI+ V GT A ++ + + R +I+SLP + ++YP
Sbjct: 256 MLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYP 315
Query: 287 QADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPPAQVPLSLDID-ENIGE 345
AD AL LL +ML FEPS RI+ AL+HP+++ +DP P P D E +
Sbjct: 316 GADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEPDCAPPFDFAFDREALTR 375
Query: 346 QMIRQMMWNETLHYH 360
+ I++ + E +H
Sbjct: 376 ERIKEAIVAEIEDFH 390
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 337 bits (864), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 175/375 (46%), Positives = 239/375 (63%), Gaps = 19/375 (5%)
Query: 5 VEPPNGMKSRGKHYYTM-------------WQTLFEIDTKYVPIKPIGRGAYGVVCSSIN 51
EPP +K+ H + F++ +Y I+ IG GAYGVV S+
Sbjct: 17 AEPPGPVKAEPAHTAASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARR 76
Query: 52 RETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVY 110
R T ++VAIKKI N F+ +A RTLREL +L+H KHDN+IA+KD++ PT FK VY
Sbjct: 77 RLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY 136
Query: 111 LVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANC 170
+V +LM++DLHQII SSQ L+ +H +YF++QLLRGLKY+HSA ++HRDLKP NLLVN NC
Sbjct: 137 VVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENC 196
Query: 171 DLKICDFGLAR---TSRGNEQ-FMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAE 226
+LKI DFG+AR TS Q FMTEYV TRWYRAPEL+L Y +ID+WSVGCIF E
Sbjct: 197 ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGE 256
Query: 227 ILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYP 286
+L R+ +FPG ++QL+LI+ V GT A ++ + + R +I+SLP + ++YP
Sbjct: 257 MLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYP 316
Query: 287 QADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPPAQVPLSLDID-ENIGE 345
AD AL LL +ML FEPS RI+ AL+HP+++ +DP P P D E +
Sbjct: 317 GADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEPDCAPPFDFAFDREALTR 376
Query: 346 QMIRQMMWNETLHYH 360
+ I++ + E +H
Sbjct: 377 ERIKEAIVAEIEDFH 391
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 331 bits (849), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 163/344 (47%), Positives = 233/344 (67%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 16 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 74
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 75 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 133
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ ++ DL I
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCI 253
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 254 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 314 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 357
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 331 bits (849), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 163/344 (47%), Positives = 233/344 (67%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 20 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILL 78
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 79 AFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 137
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 257
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY++
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQ 317
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 318 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 361
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 331 bits (848), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 163/344 (47%), Positives = 232/344 (67%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 26 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 84
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 85 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 143
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 144 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 203
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 204 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 263
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 264 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 323
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 324 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 367
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 331 bits (848), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 163/344 (47%), Positives = 232/344 (67%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 76
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 135
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 316 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 359
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 330 bits (847), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 163/344 (47%), Positives = 232/344 (67%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 20 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 78
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 79 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 137
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 257
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 317
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 318 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 361
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 330 bits (847), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 163/344 (47%), Positives = 232/344 (67%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 76
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 135
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 316 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 359
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 330 bits (847), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 163/344 (47%), Positives = 232/344 (67%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 38 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILL 96
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 97 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 155
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 276 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 336 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 379
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 330 bits (846), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 163/344 (47%), Positives = 232/344 (67%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 16 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 74
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 75 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 133
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 134 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 193
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 194 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 253
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 254 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 314 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 357
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 330 bits (846), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 163/344 (47%), Positives = 232/344 (67%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 23 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 81
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 82 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 140
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 200
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 261 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 321 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 364
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 330 bits (846), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 163/344 (47%), Positives = 232/344 (67%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 24 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 82
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 83 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 141
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 142 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 201
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 202 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 261
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 262 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 321
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 322 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 365
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 330 bits (846), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 163/344 (47%), Positives = 232/344 (67%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 15 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 73
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 74 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 132
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 133 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 192
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 193 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 252
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 253 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 312
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 313 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 356
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 330 bits (846), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 163/344 (47%), Positives = 232/344 (67%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 80
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 139
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 320 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 363
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 330 bits (846), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 160/340 (47%), Positives = 235/340 (69%), Gaps = 6/340 (1%)
Query: 26 FEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRH 85
F++ +Y ++ IG GAYG+V S+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 39 FDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISP-FEHQTYCQRTLREIQILLR 97
Query: 86 IKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
+H+NVI ++D++ + + +DVY+V +LM+TDL++++KS Q LSNDH YF++Q+LRG
Sbjct: 98 FRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ-LSNDHICYFLYQILRG 156
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---RGNEQFMTEYVVTRWYRAP 202
LKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR + + F+TE V TRWYRAP
Sbjct: 157 LKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAP 216
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 276
Query: 263 NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGL 322
N KAR +++SLP + L+P++D ALDLL +ML F P+KRITV EAL HPY+
Sbjct: 277 NMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQY 336
Query: 323 YDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHP 361
YDP P A+ P + ++ +++ ++ ++++++ ET + P
Sbjct: 337 YDPTDEPVAEEPFTFAMELDDLPKERLKELIFQETARFQP 376
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 329 bits (843), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/344 (47%), Positives = 232/344 (67%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAI+KI+ FE++ RTLRE+ +L
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKIS-PFEHQTYCQRTLREIKILL 80
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 139
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 320 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 363
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 329 bits (843), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 163/344 (47%), Positives = 231/344 (67%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 80
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K Q LSNDH YF++Q+LR
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKC-QHLSNDHICYFLYQILR 139
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 320 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 363
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 327 bits (839), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 162/344 (47%), Positives = 231/344 (67%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 76
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 135
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N DLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXI 255
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 316 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 359
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 327 bits (837), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 162/344 (47%), Positives = 231/344 (67%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYXQRTLREIKILL 80
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 139
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N DLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 320 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 363
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 327 bits (837), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 162/344 (47%), Positives = 231/344 (67%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 80
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 139
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N DLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 320 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 363
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 327 bits (837), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 162/344 (47%), Positives = 231/344 (67%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 76
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 135
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N DLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 316 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 359
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 325 bits (832), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 161/344 (46%), Positives = 230/344 (66%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 80
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 139
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR + + F+ E V TRWYRA
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 199
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 320 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 363
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 325 bits (832), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 161/344 (46%), Positives = 230/344 (66%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 23 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 81
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 82 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 140
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N CDLKICDFGLAR + + F+ E V TRWYRA
Sbjct: 141 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRA 200
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 201 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 261 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 321 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 364
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 325 bits (832), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 161/344 (46%), Positives = 231/344 (67%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 20 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 78
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 79 AFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 137
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N DLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 138 GLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 197
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL
Sbjct: 198 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCG 257
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY++
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLAQ 317
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 318 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 361
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 324 bits (831), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 162/344 (47%), Positives = 228/344 (66%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 38 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILL 96
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVYLV LM DL++++K+ Q LSNDH YF++Q+LR
Sbjct: 97 RFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT-QHLSNDHICYFLYQILR 155
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N DLKICDFGLAR + + F+TEYV TRWYRA
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 215
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 276 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 336 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 379
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 324 bits (830), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 161/344 (46%), Positives = 230/344 (66%), Gaps = 6/344 (1%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+F++ +Y + IG GAYG+VCS+ + +VAIKKI+ FE++ RTLRE+ +L
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILL 76
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLR 144
+H+N+I + D++ KDVY+V +LM+TDL++++K+ Q LSNDH YF++Q+LR
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILR 135
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ---FMTEYVVTRWYRA 201
GLKY+HSAN+LHRDLKP NLL+N DLKI DFGLAR + + F+TEYV TRWYRA
Sbjct: 136 GLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRA 195
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y SID+WSVGCI AE+L +PIFPG L+QL I+ + G+ + DL I
Sbjct: 196 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXI 255
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
N KAR ++ SLP+ + L+P AD ALDLL KML F P KRI V +AL HPY+
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
Query: 322 LYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHPEAR 364
YDP P A+ P D++ +++ ++ ++++++ ET + P R
Sbjct: 316 YYDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYR 359
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 324 bits (830), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 158/336 (47%), Positives = 226/336 (67%), Gaps = 18/336 (5%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G GAYGVVCS+ ++ T E VAIKKI F+ + ALRTLRE+ +L+H KH+N+I + ++
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEP-FDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 98 MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHR 157
P +F +VY++ ELM TDLH++I S+Q LS+DH +YF++Q LR +K LH +N++HR
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 158 DLKPGNLLVNANCDLKICDFGLART----------SRGNEQFMTEYVVTRWYRAPELLLC 207
DLKP NLL+N+NCDLK+CDFGLAR G + MTEYV TRWYRAPE++L
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLT 196
Query: 208 CDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGT-QQEADLEFIDNPKA 266
Y ++DVWS GCI AE+ R+PIFPG + +QL LI + GT + DL I++P+A
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRA 256
Query: 267 RRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQ 326
R +IKSLP + ++P+ +P +DLLQ+MLVF+P+KRIT EAL+HPY+ +DP
Sbjct: 257 REYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN 316
Query: 327 CNPPAQ--VPLSLDID---ENIGEQMIRQMMWNETL 357
P + P + D E + + +++++WNE
Sbjct: 317 DEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEIF 352
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 321 bits (822), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 156/336 (46%), Positives = 225/336 (66%), Gaps = 18/336 (5%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G GAYGVVCS+ ++ T E VAIKKI F+ + ALRTLRE+ +L+H KH+N+I + ++
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEP-FDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 98 MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHR 157
P +F +VY++ ELM TDLH++I S+Q LS+DH +YF++Q LR +K LH +N++HR
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 158 DLKPGNLLVNANCDLKICDFGLART----------SRGNEQFMTEYVVTRWYRAPELLLC 207
DLKP NLL+N+NCDLK+CDFGLAR G + M E+V TRWYRAPE++L
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT 196
Query: 208 CDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGT-QQEADLEFIDNPKA 266
Y ++DVWS GCI AE+ R+PIFPG + +QL LI + GT + DL I++P+A
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRA 256
Query: 267 RRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQ 326
R +IKSLP + ++P+ +P +DLLQ+MLVF+P+KRIT EAL+HPY+ +DP
Sbjct: 257 REYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN 316
Query: 327 CNPPAQ--VPLSLDID---ENIGEQMIRQMMWNETL 357
P + P + D E + + +++++WNE
Sbjct: 317 DEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEIF 352
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 321 bits (822), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 157/334 (47%), Positives = 225/334 (67%), Gaps = 18/334 (5%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G GAYGVVCS+ ++ T E VAIKKI F+ + ALRTLRE+ +L+H KH+N+I + ++
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEP-FDKPLFALRTLREIKILKHFKHENIITIFNI 77
Query: 98 MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHR 157
P +F +VY++ ELM TDLH++I S+Q LS+DH +YF++Q LR +K LH +N++HR
Sbjct: 78 QRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRAVKVLHGSNVIHR 136
Query: 158 DLKPGNLLVNANCDLKICDFGLART----------SRGNEQFMTEYVVTRWYRAPELLLC 207
DLKP NLL+N+NCDLK+CDFGLAR G + MTE V TRWYRAPE++L
Sbjct: 137 DLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLT 196
Query: 208 CDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGT-QQEADLEFIDNPKA 266
Y ++DVWS GCI AE+ R+PIFPG + +QL LI + GT + DL I++P+A
Sbjct: 197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRA 256
Query: 267 RRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQ 326
R +IKSLP + ++P+ +P +DLLQ+MLVF+P+KRIT EAL+HPY+ +DP
Sbjct: 257 REYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPN 316
Query: 327 CNPPAQ--VPLSLDID---ENIGEQMIRQMMWNE 355
P + P + D E + + +++++WNE
Sbjct: 317 DEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNE 350
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 305 bits (782), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/341 (45%), Positives = 229/341 (67%), Gaps = 7/341 (2%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ + ++P+G GAYG VCS+ + +KVA+KK++ F++ I A RT REL L
Sbjct: 13 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRL 72
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P I F +VYLV LM DL+ I+K Q+LS++H ++ V+Q
Sbjct: 73 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC-QALSDEHVQFLVYQ 131
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
LLRGLKY+HSA I+HRDLKP N+ VN +C+L+I DFGLAR + ++ MT YV TRWYRA
Sbjct: 132 LLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA---DEEMTGYVATRWYRA 188
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L K +FPG++ ++QLK I+ V GT L I
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 248
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SLP +SS++ A+PLA+DLL +MLV + +R++ EAL H Y S
Sbjct: 249 SSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 308
Query: 322 LYDPQCNPPAQ-VPLSLDIDENIGEQMIRQMMWNETLHYHP 361
+DP+ P A+ S++ E E+ +++ + E L + P
Sbjct: 309 YHDPEDEPEAEPYDESVEAKERTLEEW-KELTYQEVLSFKP 348
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 304 bits (779), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 149/311 (47%), Positives = 217/311 (69%), Gaps = 5/311 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VCSS + ++ K+A+KK++ F++ I A RT REL L
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRL 103
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 162
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 163 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 219
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ +NQL+ I+ + GT + + +
Sbjct: 220 PEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRM 279
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ +AR +I SLP + + ++ A+PLA+DLL+KMLV + KRIT +EAL HPY S
Sbjct: 280 PSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQ 339
Query: 322 LYDPQCNPPAQ 332
+DP P ++
Sbjct: 340 YHDPDDEPESE 350
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 303 bits (776), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 154/335 (45%), Positives = 221/335 (65%), Gaps = 17/335 (5%)
Query: 10 GMKSRGKHYYTMWQ------------TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEK 57
G+ RG H M Q T++E+ +Y + P+G GAYG VC++ + +T +
Sbjct: 13 GLVPRGSHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLR 72
Query: 58 VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELM 116
VA+KK++ F++ I A RT REL LL+H+KH+NVI L DV P + F DVYLV LM
Sbjct: 73 VAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM 132
Query: 117 DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICD 176
DL+ I+K Q L++DH ++ ++Q+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI D
Sbjct: 133 GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 191
Query: 177 FGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPG 236
FGLAR + + MT YV TRWYRAPE++L +Y ++D+WSVGCI AE+L + +FPG
Sbjct: 192 FGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 248
Query: 237 TECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLL 296
T+ ++QLKLI+ + GT L+ I + AR +I+SL + ++++ A+PLA+DLL
Sbjct: 249 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLL 308
Query: 297 QKMLVFEPSKRITVTEALQHPYISGLYDPQCNPPA 331
+KMLV + KRIT +AL H Y + +DP P A
Sbjct: 309 EKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 343
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 303 bits (775), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 223/332 (67%), Gaps = 14/332 (4%)
Query: 10 GMKSRGKH-------YY--TMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAI 60
G+ RG H +Y + +T++E+ +Y + P+G GAYG VC++ + +T +VA+
Sbjct: 13 GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAV 72
Query: 61 KKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTD 119
KK++ F++ I A RT REL LL+H+KH+NVI L DV P + F DVYLV LM D
Sbjct: 73 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 132
Query: 120 LHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGL 179
L+ I+K Q L++DH ++ ++Q+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGL
Sbjct: 133 LNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGL 191
Query: 180 ARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTEC 239
AR + + MT YV TRWYRAPE++L +Y ++D+WSVGCI AE+L + +FPGT+
Sbjct: 192 ARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
Query: 240 LNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKM 299
++QLKLI+ + GT L+ I + AR +I+SL + ++++ A+PLA+DLL+KM
Sbjct: 249 IDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKM 308
Query: 300 LVFEPSKRITVTEALQHPYISGLYDPQCNPPA 331
LV + KRIT +AL H Y + +DP P A
Sbjct: 309 LVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 340
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 303 bits (775), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 149/311 (47%), Positives = 215/311 (69%), Gaps = 5/311 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ + ++P+G GAYG VCS+ + +KVA+KK++ F++ I A RT REL L
Sbjct: 21 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRL 80
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P I F +VYLV LM DL+ I+KS Q+LS++H ++ V+Q
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS-QALSDEHVQFLVYQ 139
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
LLRGLKY+HSA I+HRDLKP N+ VN + +L+I DFGLAR + ++ MT YV TRWYRA
Sbjct: 140 LLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA---DEEMTGYVATRWYRA 196
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L K +FPG++ ++QLK I+ V GT L I
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 256
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SLP +SS++ A+PLA+DLL +MLV + +R++ EAL H Y S
Sbjct: 257 SSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
Query: 322 LYDPQCNPPAQ 332
+DP+ P A+
Sbjct: 317 YHDPEDEPEAE 327
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 303 bits (775), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 223/332 (67%), Gaps = 14/332 (4%)
Query: 10 GMKSRGKH-------YY--TMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAI 60
G+ RG H +Y + +T++E+ +Y + P+G GAYG VC++ + +T +VA+
Sbjct: 12 GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAV 71
Query: 61 KKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTD 119
KK++ F++ I A RT REL LL+H+KH+NVI L DV P + F DVYLV LM D
Sbjct: 72 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 131
Query: 120 LHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGL 179
L+ I+K Q L++DH ++ ++Q+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGL
Sbjct: 132 LNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGL 190
Query: 180 ARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTEC 239
AR + + MT YV TRWYRAPE++L +Y ++D+WSVGCI AE+L + +FPGT+
Sbjct: 191 ARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 247
Query: 240 LNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKM 299
++QLKLI+ + GT L+ I + AR +I+SL + ++++ A+PLA+DLL+KM
Sbjct: 248 IDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKM 307
Query: 300 LVFEPSKRITVTEALQHPYISGLYDPQCNPPA 331
LV + KRIT +AL H Y + +DP P A
Sbjct: 308 LVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 339
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 302 bits (774), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 302 bits (774), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 139
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 196
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 257 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 317 YHDPDDEPVA 326
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 302 bits (773), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 25 KTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 84
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 85 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 143
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 144 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 200
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 260
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 261 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 320
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 321 YHDPDDEPVA 330
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 302 bits (773), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 301 bits (772), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 129
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 186
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 307 YHDPDDEPVA 316
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 301 bits (772), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 301 bits (772), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 140
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + MT YV TRWYRA
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRA 197
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 318 YHDPDDEPVA 327
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 301 bits (771), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 223/332 (67%), Gaps = 14/332 (4%)
Query: 10 GMKSRGKH-------YY--TMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAI 60
G+ RG H +Y + +T++E+ +Y + P+G GAYG VC++ + +T +VA+
Sbjct: 13 GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAV 72
Query: 61 KKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTD 119
KK++ F++ I A RT REL LL+H+KH+NVI L DV P + F DVYLV LM D
Sbjct: 73 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 132
Query: 120 LHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGL 179
L+ I+K Q L++DH ++ ++Q+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGL
Sbjct: 133 LNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGL 191
Query: 180 ARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTEC 239
AR + + MT YV TRWYRAPE++L +Y ++D+WSVGCI AE+L + +FPGT+
Sbjct: 192 ARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
Query: 240 LNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKM 299
++QLKLI+ + GT L+ I + AR +I+SL + ++++ A+PLA+DLL+KM
Sbjct: 249 IDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKM 308
Query: 300 LVFEPSKRITVTEALQHPYISGLYDPQCNPPA 331
LV + KRIT +AL H Y + +DP P A
Sbjct: 309 LVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 340
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 301 bits (771), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 140
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 197
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 318 YHDPDDEPVA 327
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 301 bits (771), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 139
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 196
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 257 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 317 YHDPDDEPVA 326
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 301 bits (771), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 223/332 (67%), Gaps = 14/332 (4%)
Query: 10 GMKSRGKH-------YY--TMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAI 60
G+ RG H +Y + +T++E+ +Y + P+G GAYG VC++ + +T +VA+
Sbjct: 12 GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAV 71
Query: 61 KKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTD 119
KK++ F++ I A RT REL LL+H+KH+NVI L DV P + F DVYLV LM D
Sbjct: 72 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 131
Query: 120 LHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGL 179
L+ I+K Q L++DH ++ ++Q+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGL
Sbjct: 132 LNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGL 190
Query: 180 ARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTEC 239
AR + + MT YV TRWYRAPE++L +Y ++D+WSVGCI AE+L + +FPGT+
Sbjct: 191 ARHT---DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 247
Query: 240 LNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKM 299
++QLKLI+ + GT L+ I + AR +I+SL + ++++ A+PLA+DLL+KM
Sbjct: 248 IDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKM 307
Query: 300 LVFEPSKRITVTEALQHPYISGLYDPQCNPPA 331
LV + KRIT +AL H Y + +DP P A
Sbjct: 308 LVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 339
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 301 bits (771), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 140
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + MT YV TRWYRA
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRA 197
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 318 YHDPDDEPVA 327
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 301 bits (771), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 22 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 81
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 82 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 140
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + MT YV TRWYRA
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE---MTGYVATRWYRA 197
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 257
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 258 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 318 YHDPDDEPVA 327
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 301 bits (771), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 139
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 196
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 257 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 317 YHDPDDEPVA 326
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 301 bits (771), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRL 86
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 145
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 202
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 262
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 263 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 323 YHDPDDEPVA 332
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 301 bits (771), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 301 bits (770), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 145
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 202
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 262
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 263 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 323 YHDPDDEPVA 332
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 301 bits (770), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 135
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 192
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 313 YHDPDDEPVA 322
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 301 bits (770), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 27 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 86
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 87 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 145
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 202
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 262
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 263 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 323 YHDPDDEPVA 332
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 301 bits (770), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 151/325 (46%), Positives = 220/325 (67%), Gaps = 7/325 (2%)
Query: 10 GMKSRGKHYY--TMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVF 67
GM +Y + +T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F
Sbjct: 11 GMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 70
Query: 68 ENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKS 126
++ I A RT REL LL+H+KH+NVI L DV P + F DVYLV LM DL+ I+K
Sbjct: 71 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 130
Query: 127 SQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGN 186
Q L++DH ++ ++Q+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR +
Sbjct: 131 -QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT--- 186
Query: 187 EQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLI 246
+ MT YV TRWYRAPE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI
Sbjct: 187 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
Query: 247 ISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSK 306
+ + GT L+ I + AR +I+SL + ++++ A+PLA+DLL+KMLV + K
Sbjct: 247 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 306
Query: 307 RITVTEALQHPYISGLYDPQCNPPA 331
RIT +AL H Y + +DP P A
Sbjct: 307 RITAAQALAHAYFAQYHDPDDEPVA 331
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 301 bits (770), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 138
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 195
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 316 YHDPDDEPVA 325
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 301 bits (770), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 14 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 73
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 74 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 132
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 133 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 189
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 249
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 250 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 309
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 310 YHDPDDEPVA 319
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 301 bits (770), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 301 bits (770), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 301 bits (770), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 301 bits (770), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 301 bits (770), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 147/310 (47%), Positives = 216/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K ++ L++DH ++ ++Q
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK-LTDDHVQFLIYQ 129
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 186
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 307 YHDPDDEPVA 316
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 301 bits (770), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 138
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 195
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 316 YHDPDDEPVA 325
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 301 bits (770), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 135
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 192
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 313 YHDPDDEPVA 322
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 301 bits (770), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 300 bits (769), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 135
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 192
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 313 YHDPDDEPVA 322
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 300 bits (769), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 13 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 72
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 73 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 131
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 132 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 188
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 248
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 249 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 308
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 309 YHDPDDEPVA 318
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 300 bits (769), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 130
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 187
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 247
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 248 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 308 YHDPDDEPVA 317
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 300 bits (769), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 129
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 186
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 247 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 307 YHDPDDEPVA 316
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 300 bits (769), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 300 bits (769), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 12 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 71
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 72 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 130
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT YV TRWYRA
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRA 187
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 247
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 248 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 308 YHDPDDEPVA 317
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 300 bits (768), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 148/311 (47%), Positives = 214/311 (68%), Gaps = 5/311 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ + ++P+G GAYG VCS+ + +KVA+KK++ F++ I A RT REL L
Sbjct: 21 KTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRL 80
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P I F +VYLV LM DL+ I+K Q+LS++H ++ V+Q
Sbjct: 81 LKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC-QALSDEHVQFLVYQ 139
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
LLRGLKY+HSA I+HRDLKP N+ VN + +L+I DFGLAR + ++ MT YV TRWYRA
Sbjct: 140 LLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA---DEEMTGYVATRWYRA 196
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L K +FPG++ ++QLK I+ V GT L I
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 256
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SLP +SS++ A+PLA+DLL +MLV + +R++ EAL H Y S
Sbjct: 257 SSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
Query: 322 LYDPQCNPPAQ 332
+DP+ P A+
Sbjct: 317 YHDPEDEPEAE 327
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 300 bits (767), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 147/310 (47%), Positives = 215/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI D+GLAR + + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHT---DDEMTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 299 bits (766), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + M +V TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMAGFVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 299 bits (765), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 38 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 97
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 98 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 156
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + M YV TRWYRA
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMXGYVATRWYRA 213
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 273
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 274 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 334 YHDPDDEPVA 343
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 299 bits (765), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 146/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + M +V TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMAGFVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 299 bits (765), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 146/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 11 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 70
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 71 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 129
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + M +V TRWYRA
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMAGFVATRWYRA 186
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 247 SSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 307 YHDPDDEPVA 316
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 298 bits (764), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 21 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 80
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 81 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 139
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN + +LKI DFGLAR + + MT YV TRWYRA
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHT---DDEMTGYVATRWYRA 196
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 256
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 257 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 317 YHDPDDEPVA 326
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 298 bits (763), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DF LAR + + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHT---DDEMTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 298 bits (763), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI FGLAR + + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHT---DDEMTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 298 bits (763), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN + +LKI DFGLAR + + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 298 bits (762), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 147/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+KS Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKS-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN + +LKI DFGL R + + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHT---DDEMTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 298 bits (762), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 147/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 17 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 76
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 77 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 135
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN + +LKI DFGLAR + + MT YV TRWYRA
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHT---DDEMTGYVATRWYRA 192
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 252
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 253 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 313 YHDPDDEPVA 322
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 298 bits (762), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 147/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI D GLAR + + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHT---DDEMTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 298 bits (762), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 148/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + PIG GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 20 KTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 138
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN + +LKI DFGLAR + + MT YV TRWYRA
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATRWYRA 195
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 316 YHDPDDEPVA 325
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 297 bits (761), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 151/332 (45%), Positives = 221/332 (66%), Gaps = 14/332 (4%)
Query: 10 GMKSRGKH-------YY--TMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAI 60
G+ RG H +Y + +T++E+ +Y + P+G GAYG VC++ + +T +VA+
Sbjct: 13 GLVPRGSHMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAV 72
Query: 61 KKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTD 119
KK++ F++ I A RT REL LL+H+KH+NVI L DV P + F DVYLV LM D
Sbjct: 73 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 132
Query: 120 LHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGL 179
L+ I+K Q L++DH ++ ++Q+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGL
Sbjct: 133 LNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGL 191
Query: 180 ARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTEC 239
AR + + M V TRWYRAPE++L +Y ++D+WSVGCI AE+L + +FPGT+
Sbjct: 192 ARHT---DDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH 248
Query: 240 LNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKM 299
++QLKLI+ + GT L+ I + AR +I+SL + ++++ A+PLA+DLL+KM
Sbjct: 249 IDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKM 308
Query: 300 LVFEPSKRITVTEALQHPYISGLYDPQCNPPA 331
LV + KRIT +AL H Y + +DP P A
Sbjct: 309 LVLDSDKRITAAQALAHAYFAQYHDPDDEPVA 340
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 297 bits (761), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 147/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI D GLAR + + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHT---DDEMTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 297 bits (761), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 150/325 (46%), Positives = 219/325 (67%), Gaps = 7/325 (2%)
Query: 10 GMKSRGKHYY--TMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVF 67
GM +Y + +T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F
Sbjct: 11 GMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 70
Query: 68 ENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKS 126
++ I A RT REL LL+H+KH+NVI L DV P + F DVYLV LM DL+ I+K
Sbjct: 71 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 130
Query: 127 SQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGN 186
Q L++DH ++ ++Q+LRGLKY+HSA+I+HRDLKP NL VN + +LKI DFGLAR +
Sbjct: 131 -QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT--- 186
Query: 187 EQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLI 246
+ MT YV TRWYRAPE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI
Sbjct: 187 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 246
Query: 247 ISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSK 306
+ + GT L+ I + AR +I+SL + ++++ A+PLA+DLL+KMLV + K
Sbjct: 247 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK 306
Query: 307 RITVTEALQHPYISGLYDPQCNPPA 331
RIT +AL H Y + +DP P A
Sbjct: 307 RITAAQALAHAYFAQYHDPDDEPVA 331
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 297 bits (761), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 147/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI DFGLAR + + MT V TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGXVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 297 bits (761), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 147/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 15 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 74
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 75 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 133
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN +C+LKI D GLAR + + MT YV TRWYRA
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHT---DDEMTGYVATRWYRA 190
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 250
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 251 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 311 YHDPDDEPVA 320
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 297 bits (760), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 147/310 (47%), Positives = 214/310 (69%), Gaps = 5/310 (1%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T++E+ +Y + P+G GAYG VC++ + +T +VA+KK++ F++ I A RT REL L
Sbjct: 20 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRL 79
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H+KH+NVI L DV P + F DVYLV LM DL+ I+K Q L++DH ++ ++Q
Sbjct: 80 LKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQ 138
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+LRGLKY+HSA+I+HRDLKP NL VN + +LKI DFGLAR + + MT YV TRWYRA
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHT---DDEMTGYVATRWYRA 195
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L +Y ++D+WSVGCI AE+L + +FPGT+ ++QLKLI+ + GT L+ I
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 255
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ AR +I+SL + ++++ A+PLA+DLL+KMLV + KRIT +AL H Y +
Sbjct: 256 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
Query: 322 LYDPQCNPPA 331
+DP P A
Sbjct: 316 YHDPDDEPVA 325
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 292 bits (747), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 223/353 (63%), Gaps = 7/353 (1%)
Query: 11 MKSRGKHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENR 70
++ +G + + +T +E+ YV +G GAYG VCS+I++ + EKVAIKK++ F++
Sbjct: 23 IRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE 82
Query: 71 IDALRTLRELVLLRHIKHDNVIALKDVMMPTHRI-SFKDVYLVYELMDTDLHQIIKSSQS 129
I A R REL+LL+H++H+NVI L DV P + +F D YLV M TDL +I+
Sbjct: 83 IFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM--GME 140
Query: 130 LSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF 189
S + +Y V+Q+L+GLKY+HSA ++HRDLKPGNL VN +C+LKI DFGLAR +
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--- 197
Query: 190 MTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISV 249
MT YVVTRWYRAPE++L +Y ++D+WSVGCI AE+L K +F G + L+QL I+ V
Sbjct: 198 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 257
Query: 250 FGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRIT 309
G ++ +++ A+ +I+SLP + + L+P+A P A DLL+KML + KR+T
Sbjct: 258 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT 317
Query: 310 VTEALQHPYISGLYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHP 361
+AL HP+ DP+ AQ P ++ E + +Q ++ E +++ P
Sbjct: 318 AAQALTHPFFEPFRDPEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEIVNFSP 370
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 291 bits (746), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 223/353 (63%), Gaps = 7/353 (1%)
Query: 11 MKSRGKHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENR 70
++ +G + + +T +E+ YV +G GAYG VCS+I++ + EKVAIKK++ F++
Sbjct: 5 IRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSE 64
Query: 71 IDALRTLRELVLLRHIKHDNVIALKDVMMPTHRI-SFKDVYLVYELMDTDLHQIIKSSQS 129
I A R REL+LL+H++H+NVI L DV P + +F D YLV M TDL +I+
Sbjct: 65 IFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM--GLK 122
Query: 130 LSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF 189
S + +Y V+Q+L+GLKY+HSA ++HRDLKPGNL VN +C+LKI DFGLAR +
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--- 179
Query: 190 MTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISV 249
MT YVVTRWYRAPE++L +Y ++D+WSVGCI AE+L K +F G + L+QL I+ V
Sbjct: 180 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKV 239
Query: 250 FGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRIT 309
G ++ +++ A+ +I+SLP + + L+P+A P A DLL+KML + KR+T
Sbjct: 240 TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT 299
Query: 310 VTEALQHPYISGLYDPQCNPPAQVPLSLDID-ENIGEQMIRQMMWNETLHYHP 361
+AL HP+ DP+ AQ P ++ E + +Q ++ E +++ P
Sbjct: 300 AAQALTHPFFEPFRDPEEETEAQQPFDDSLEHEKLTVDEWKQHIYKEIVNFSP 352
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 282 bits (722), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/342 (42%), Positives = 215/342 (62%), Gaps = 9/342 (2%)
Query: 23 QTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+T +E+ Y ++P+G GAYG VCS+++ T KVAIKK+ F++ + A R REL L
Sbjct: 18 KTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRL 77
Query: 83 LRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L+H++H+NVI L DV P + F D YLV M TDL +++K + L D ++ V+Q
Sbjct: 78 LKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH-EKLGEDRIQFLVYQ 136
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
+L+GL+Y+H+A I+HRDLKPGNL VN +C+LKI DFGLAR + M VVTRWYRA
Sbjct: 137 MLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE---MXGXVVTRWYRA 193
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE++L Y ++D+WSVGCI AE++ K +F G++ L+QLK I+ V GT ++ +
Sbjct: 194 PEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL 253
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
+ +A+ ++K LP +S+ A PLA++LL+KMLV + +R+T EAL HPY
Sbjct: 254 QSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFES 313
Query: 322 LYDPQCNPPAQVPLSL--DIDENIGEQMIRQMMWNETLHYHP 361
L+D + P Q D+D + E +++ + E L + P
Sbjct: 314 LHDTEDEPQVQKYDDSFDDVDRTLDEW--KRVTYKEVLSFKP 353
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 267 bits (683), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 149/404 (36%), Positives = 219/404 (54%), Gaps = 64/404 (15%)
Query: 19 YTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR 78
++ WQ I +Y IG G+YG VC + ++ VAIKKI VFE+ ID R LR
Sbjct: 46 HSDWQ----IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR 101
Query: 79 ELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYF 138
E+ +L + HD+V+ + D+++P F ++Y+V E+ D+D ++ ++ L+ H K
Sbjct: 102 EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTL 161
Query: 139 VFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART----SRGNEQF----- 189
++ LL G+KY+HSA ILHRDLKP N LVN +C +K+CDFGLART GN Q
Sbjct: 162 LYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPR 221
Query: 190 ------------------MTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILG-- 229
+T +VVTRWYRAPEL+L +NY +IDVWS+GCIFAE+L
Sbjct: 222 EDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMI 281
Query: 230 ---------RKPIFPGTECL--------------------NQLKLIISVFGTQQEADLEF 260
R P+FPG+ C +QL +I ++ GT E D+E
Sbjct: 282 KENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEA 341
Query: 261 IDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS 320
++ A+R+I+ P GT ++ +P + A+ LL++MLVF P+KRIT+ E L HP+
Sbjct: 342 LEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFK 401
Query: 321 G--LYDPQCNPPAQVPLSLDIDENIGEQMIRQMMWNETLHYHPE 362
+ + + N +V L + N+ E +R E YHPE
Sbjct: 402 EVRIAEVETNATEKVRLPFNDWMNMDEPQLRYAFVKEIQRYHPE 445
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 259 bits (662), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/365 (39%), Positives = 221/365 (60%), Gaps = 44/365 (12%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIK-HD 89
KY +K +G+GAYG+V SI+R T E VA+KKI + F+N DA RT RE+++L + H+
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 90 NVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
N++ L +V+ + +DVYLV++ M+TDLH +I+++ L H +Y V+QL++ +KYL
Sbjct: 70 NIVNLLNVLRADND---RDVYLVFDYMETDLHAVIRAN-ILEPVHKQYVVYQLIKVIKYL 125
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLART---------------SRGNEQF----- 189
HS +LHRD+KP N+L+NA C +K+ DFGL+R+ + E F
Sbjct: 126 HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 190 -MTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
+T+YV TRWYRAPE+LL Y ID+WS+GCI EIL KPIFPG+ +NQL+ II
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG 245
Query: 249 VFGTQQEADLEFIDNPKARRFIKSLPYS---RGTHISSLY-----------PQAD--PLA 292
V D+E I +P A+ I+SL R ++ ++ P+AD A
Sbjct: 246 VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEA 305
Query: 293 LDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPPAQVPLSLDIDENIGEQM--IRQ 350
LDLL K+L F P+KRI+ +AL+HP++S ++P P +++ I++N+ + R
Sbjct: 306 LDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEPNCDHIITIPINDNVKHSIDDYRN 365
Query: 351 MMWNE 355
++++E
Sbjct: 366 LVYSE 370
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 256 bits (655), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 212/377 (56%), Gaps = 52/377 (13%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
IGRG+YG V + ++ T + VAIKK+N +FE+ ID R LRE+ +L +K D +I L D+
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDL 93
Query: 98 MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHR 157
++P + F ++Y+V E+ D+DL ++ K+ L+ +H K ++ LL G ++H + I+HR
Sbjct: 94 IIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHR 153
Query: 158 DLKPGNLLVNANCDLKICDFGLART----------------------SRGNEQFMTEYVV 195
DLKP N L+N +C +K+CDFGLART ++ ++ +T +VV
Sbjct: 154 DLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVV 213
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-----------GRKPIFPGTECL---- 240
TRWYRAPEL+L +NY SID+WS GCIFAE+L R P+FPG+ C
Sbjct: 214 TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSP 273
Query: 241 -------------NQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQ 287
+QL +I ++ GT E DL+ I+ P+ ++IK P+ + ++ YP
Sbjct: 274 DRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPS 333
Query: 288 ADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPPAQVPLSLDIDE--NIGE 345
++LL+ ML F P+KRIT+ +AL HPY+ + + + + L D+ + E
Sbjct: 334 ISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLENFSTKKIILPFDDWMVLSE 393
Query: 346 QMIRQMMWNETLHYHPE 362
+R + E +HPE
Sbjct: 394 TQLRYIFLKEVQSFHPE 410
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 255 bits (652), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 220/364 (60%), Gaps = 28/364 (7%)
Query: 14 RGKHYYT--MWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI 71
R ++Y+ + + F + +Y +KPIG GA G+VC++ + VAIKK++ F+N+
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 72 DALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSL 130
A R RELVL++ + H N+I L +V P + F+DVY+V ELMD +L Q+I+ L
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MEL 123
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
++ Y ++Q+L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G M
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMM 182
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVF 250
T YVVTR+YRAPE++L Y ++D+WSVGCI E++ +FPGT+ ++Q +I
Sbjct: 183 TPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 251 GTQQEADLEFID--NPKARRFIKSLPYSRGTHISSLYPQ----AD--------PLALDLL 296
GT EF+ P R ++++ P G L+P AD A DLL
Sbjct: 242 GTPSP---EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 298
Query: 297 QKMLVFEPSKRITVTEALQHPYISGLYDPQ--CNPPAQVP-LSLDIDENIGEQMIRQMMW 353
KMLV + SKRI+V EALQHPYI+ YDP PP ++P LD E+ E+ +++++
Sbjct: 299 SKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEW-KELIY 357
Query: 354 NETL 357
E +
Sbjct: 358 KEVM 361
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 254 bits (648), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 147/364 (40%), Positives = 219/364 (60%), Gaps = 28/364 (7%)
Query: 14 RGKHYYT--MWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI 71
R ++Y+ + + F + +Y +KPIG GA G+VC++ + VAIKK++ F+N+
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 72 DALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSL 130
A R RELVL++ + H N+I L +V P + F+DVY+V ELMD +L Q+I+ L
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MEL 123
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
++ Y ++Q+L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G M
Sbjct: 124 DHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMM 182
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVF 250
T YVVTR+YRAPE++L Y ++D+WSVGCI E++ +FPGT+ ++Q +I
Sbjct: 183 TPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 251 GTQQEADLEFID--NPKARRFIKSLPYSRGTHISSLYPQ----AD--------PLALDLL 296
GT EF+ P R ++++ P G L+P AD A DLL
Sbjct: 242 GTPSP---EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 298
Query: 297 QKMLVFEPSKRITVTEALQHPYISGLYDPQ--CNPPAQVP-LSLDIDENIGEQMIRQMMW 353
KMLV + SKRI+V EALQHPYI+ YDP PP ++P LD E+ E+ +++++
Sbjct: 299 SKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEW-KELIY 357
Query: 354 NETL 357
E +
Sbjct: 358 KEVM 361
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 254 bits (648), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 220/364 (60%), Gaps = 28/364 (7%)
Query: 14 RGKHYYT--MWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI 71
R ++Y+ + + F + +Y +KPIG GA G+VC++ + VAIKK++ F+N+
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 72 DALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSL 130
A R RELVL++ + H N+I L +V P + F+DVY+V ELMD +L Q+I+ L
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MEL 123
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
++ Y ++Q+L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G M
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMM 182
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVF 250
T YVVTR+YRAPE++L Y ++D+WSVGCI E++ +FPGT+ ++Q +I
Sbjct: 183 TPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 251 GTQQEADLEFID--NPKARRFIKSLPYSRGTHISSLYPQ----AD--------PLALDLL 296
GT EF+ P R ++++ P G L+P AD A DLL
Sbjct: 242 GTPSP---EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 298
Query: 297 QKMLVFEPSKRITVTEALQHPYISGLYDPQ--CNPPAQVP-LSLDIDENIGEQMIRQMMW 353
KMLV + SKRI+V EALQHPYI+ YDP PP ++P LD E+ E+ +++++
Sbjct: 299 SKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEW-KELIY 357
Query: 354 NETL 357
E +
Sbjct: 358 KEVM 361
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 254 bits (648), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 215/353 (60%), Gaps = 26/353 (7%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLL 83
+ F + +Y +KPIG GA G+VC++ + + VAIKK++ F+N+ A R RELVL+
Sbjct: 19 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 78
Query: 84 RHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ + H N+I+L +V P + F+DVYLV ELMD +L Q+I+ L ++ Y ++Q+
Sbjct: 79 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQM 136
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G MT YVVTR+YRAP
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 195
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I GT EF+
Sbjct: 196 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP---EFMK 251
Query: 263 --NPKARRFIKSLPYSRGTHISSLYPQA------------DPLALDLLQKMLVFEPSKRI 308
P R ++++ P G L+P + A DLL KMLV +P+KRI
Sbjct: 252 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 311
Query: 309 TVTEALQHPYISGLYDP---QCNPPAQVPLSLDIDENIGEQMIRQMMWNETLH 358
+V +ALQHPYI+ YDP + PP LD E+ E+ +++++ E ++
Sbjct: 312 SVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEW-KELIYKEVMN 363
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 254 bits (648), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 215/353 (60%), Gaps = 26/353 (7%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLL 83
+ F + +Y +KPIG GA G+VC++ + + VAIKK++ F+N+ A R RELVL+
Sbjct: 19 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 78
Query: 84 RHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ + H N+I+L +V P + F+DVYLV ELMD +L Q+I+ L ++ Y ++Q+
Sbjct: 79 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQM 136
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G MT YVVTR+YRAP
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 195
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I GT EF+
Sbjct: 196 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP---EFMK 251
Query: 263 --NPKARRFIKSLPYSRGTHISSLYPQA------------DPLALDLLQKMLVFEPSKRI 308
P R ++++ P G L+P + A DLL KMLV +P+KRI
Sbjct: 252 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 311
Query: 309 TVTEALQHPYISGLYDP---QCNPPAQVPLSLDIDENIGEQMIRQMMWNETLH 358
+V +ALQHPYI+ YDP + PP LD E+ E+ +++++ E ++
Sbjct: 312 SVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEW-KELIYKEVMN 363
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 254 bits (648), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 142/353 (40%), Positives = 214/353 (60%), Gaps = 26/353 (7%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLL 83
+ F + +Y +KPIG GA G+VC++ + + VAIKK++ F+N+ A R RELVL+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHIKHDNVIALKDVMMPTHRI-SFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ + H N+I+L +V P + F+DVYLV ELMD +L Q+I+ L ++ Y ++Q+
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G MT YVVTR+YRAP
Sbjct: 136 LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I GT EF+
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP---EFMK 250
Query: 263 --NPKARRFIKSLPYSRGTHISSLYPQA------------DPLALDLLQKMLVFEPSKRI 308
P R ++++ P G L+P + A DLL KMLV +P+KRI
Sbjct: 251 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 309 TVTEALQHPYISGLYDP---QCNPPAQVPLSLDIDENIGEQMIRQMMWNETLH 358
+V +ALQHPYI+ YDP + PP LD E+ E+ +++++ E ++
Sbjct: 311 SVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEW-KELIYKEVMN 362
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 254 bits (648), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 215/353 (60%), Gaps = 26/353 (7%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLL 83
+ F + +Y +KPIG GA G+VC++ + + VAIKK++ F+N+ A R RELVL+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ + H N+I+L +V P + F+DVYLV ELMD +L Q+I+ L ++ Y ++Q+
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G MT YVVTR+YRAP
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I GT EF+
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP---EFMK 250
Query: 263 --NPKARRFIKSLPYSRGTHISSLYPQA------------DPLALDLLQKMLVFEPSKRI 308
P R ++++ P G L+P + A DLL KMLV +P+KRI
Sbjct: 251 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 309 TVTEALQHPYISGLYDP---QCNPPAQVPLSLDIDENIGEQMIRQMMWNETLH 358
+V +ALQHPYI+ YDP + PP LD E+ E+ +++++ E ++
Sbjct: 311 SVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEW-KELIYKEVMN 362
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 254 bits (648), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 215/353 (60%), Gaps = 26/353 (7%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLL 83
+ F + +Y +KPIG GA G+VC++ + + VAIKK++ F+N+ A R RELVL+
Sbjct: 56 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 115
Query: 84 RHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ + H N+I+L +V P + F+DVYLV ELMD +L Q+I+ L ++ Y ++Q+
Sbjct: 116 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQM 173
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G MT YVVTR+YRAP
Sbjct: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 232
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I GT EF+
Sbjct: 233 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP---EFMK 288
Query: 263 --NPKARRFIKSLPYSRGTHISSLYPQA------------DPLALDLLQKMLVFEPSKRI 308
P R ++++ P G L+P + A DLL KMLV +P+KRI
Sbjct: 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 348
Query: 309 TVTEALQHPYISGLYDP---QCNPPAQVPLSLDIDENIGEQMIRQMMWNETLH 358
+V +ALQHPYI+ YDP + PP LD E+ E+ +++++ E ++
Sbjct: 349 SVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEW-KELIYKEVMN 400
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 253 bits (647), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 215/353 (60%), Gaps = 26/353 (7%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLL 83
+ F + +Y +KPIG GA G+VC++ + + VAIKK++ F+N+ A R RELVL+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ + H N+I+L +V P + F+DVYLV ELMD +L Q+I+ L ++ Y ++Q+
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G MT YVVTR+YRAP
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I GT EF+
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP---EFMK 250
Query: 263 --NPKARRFIKSLPYSRGTHISSLYPQA------------DPLALDLLQKMLVFEPSKRI 308
P R ++++ P G L+P + A DLL KMLV +P+KRI
Sbjct: 251 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 309 TVTEALQHPYISGLYDP---QCNPPAQVPLSLDIDENIGEQMIRQMMWNETLH 358
+V +ALQHPYI+ YDP + PP LD E+ E+ +++++ E ++
Sbjct: 311 SVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEW-KELIYKEVMN 362
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 253 bits (647), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 215/353 (60%), Gaps = 26/353 (7%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLL 83
+ F + +Y +KPIG GA G+VC++ + + VAIKK++ F+N+ A R RELVL+
Sbjct: 17 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 76
Query: 84 RHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ + H N+I+L +V P + F+DVYLV ELMD +L Q+I+ L ++ Y ++Q+
Sbjct: 77 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQM 134
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G MT YVVTR+YRAP
Sbjct: 135 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 193
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I GT EF+
Sbjct: 194 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP---EFMK 249
Query: 263 --NPKARRFIKSLPYSRGTHISSLYPQA------------DPLALDLLQKMLVFEPSKRI 308
P R ++++ P G L+P + A DLL KMLV +P+KRI
Sbjct: 250 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 309
Query: 309 TVTEALQHPYISGLYDP---QCNPPAQVPLSLDIDENIGEQMIRQMMWNETLH 358
+V +ALQHPYI+ YDP + PP LD E+ E+ +++++ E ++
Sbjct: 310 SVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEW-KELIYKEVMN 361
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 253 bits (647), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 215/353 (60%), Gaps = 26/353 (7%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLL 83
+ F + +Y +KPIG GA G+VC++ + + VAIKK++ F+N+ A R RELVL+
Sbjct: 56 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 115
Query: 84 RHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ + H N+I+L +V P + F+DVYLV ELMD +L Q+I+ L ++ Y ++Q+
Sbjct: 116 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQM 173
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G MT YVVTR+YRAP
Sbjct: 174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 232
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I GT EF+
Sbjct: 233 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP---EFMK 288
Query: 263 --NPKARRFIKSLPYSRGTHISSLYPQA------------DPLALDLLQKMLVFEPSKRI 308
P R ++++ P G L+P + A DLL KMLV +P+KRI
Sbjct: 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 348
Query: 309 TVTEALQHPYISGLYDP---QCNPPAQVPLSLDIDENIGEQMIRQMMWNETLH 358
+V +ALQHPYI+ YDP + PP LD E+ E+ +++++ E ++
Sbjct: 349 SVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEW-KELIYKEVMN 400
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 215/353 (60%), Gaps = 26/353 (7%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLL 83
+ F + +Y +KPIG GA G+VC++ + + VAIKK++ F+N+ A R RELVL+
Sbjct: 11 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 70
Query: 84 RHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ + H N+I+L +V P + F+DVYLV ELMD +L Q+I+ L ++ Y ++Q+
Sbjct: 71 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQM 128
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G MT YVVTR+YRAP
Sbjct: 129 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 187
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I GT EF+
Sbjct: 188 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP---EFMK 243
Query: 263 --NPKARRFIKSLPYSRGTHISSLYPQA------------DPLALDLLQKMLVFEPSKRI 308
P R ++++ P G L+P + A DLL KMLV +P+KRI
Sbjct: 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 303
Query: 309 TVTEALQHPYISGLYDP---QCNPPAQVPLSLDIDENIGEQMIRQMMWNETLH 358
+V +ALQHPYI+ YDP + PP LD E+ E+ +++++ E ++
Sbjct: 304 SVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEW-KELIYKEVMN 355
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 253 bits (646), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 215/353 (60%), Gaps = 26/353 (7%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLL 83
+ F + +Y +KPIG GA G+VC++ + + VAIKK++ F+N+ A R RELVL+
Sbjct: 12 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 71
Query: 84 RHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ + H N+I+L +V P + F+DVYLV ELMD +L Q+I+ L ++ Y ++Q+
Sbjct: 72 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQM 129
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G MT YVVTR+YRAP
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 188
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I GT EF+
Sbjct: 189 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP---EFMK 244
Query: 263 --NPKARRFIKSLPYSRGTHISSLYPQA------------DPLALDLLQKMLVFEPSKRI 308
P R ++++ P G L+P + A DLL KMLV +P+KRI
Sbjct: 245 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 304
Query: 309 TVTEALQHPYISGLYDP---QCNPPAQVPLSLDIDENIGEQMIRQMMWNETLH 358
+V +ALQHPYI+ YDP + PP LD E+ E+ +++++ E ++
Sbjct: 305 SVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEW-KELIYKEVMN 356
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 253 bits (646), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 215/353 (60%), Gaps = 26/353 (7%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLL 83
+ F + +Y +KPIG GA G+VC++ + + VAIKK++ F+N+ A R RELVL+
Sbjct: 12 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 71
Query: 84 RHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ + H N+I+L +V P + F+DVYLV ELMD +L Q+I+ L ++ Y ++Q+
Sbjct: 72 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQM 129
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G MT YVVTR+YRAP
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 188
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I GT EF+
Sbjct: 189 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP---EFMK 244
Query: 263 --NPKARRFIKSLPYSRGTHISSLYPQA------------DPLALDLLQKMLVFEPSKRI 308
P R ++++ P G L+P + A DLL KMLV +P+KRI
Sbjct: 245 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 304
Query: 309 TVTEALQHPYISGLYDP---QCNPPAQVPLSLDIDENIGEQMIRQMMWNETLH 358
+V +ALQHPYI+ YDP + PP LD E+ E+ +++++ E ++
Sbjct: 305 SVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEW-KELIYKEVMN 356
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 253 bits (645), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/364 (40%), Positives = 219/364 (60%), Gaps = 28/364 (7%)
Query: 14 RGKHYYT--MWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI 71
R ++Y+ + + F + +Y +KPIG GA G+VC++ + VAIKK++ F+N+
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 72 DALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSL 130
A R RELVL++ + H N+I L +V P + F+DVY+V ELMD +L Q+I+ L
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MEL 123
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
++ Y ++Q+L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G M
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMM 182
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVF 250
T YVVTR+YRAPE++L Y ++D+WSVGCI E++ +FPGT+ ++Q +I
Sbjct: 183 TPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 251 GTQQEADLEFID--NPKARRFIKSLPYSRGTHISSLYPQ----AD--------PLALDLL 296
GT EF+ P R ++++ P G L+P AD A DLL
Sbjct: 242 GTPSP---EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 298
Query: 297 QKMLVFEPSKRITVTEALQHPYISGLYDPQ--CNPPAQVP-LSLDIDENIGEQMIRQMMW 353
KMLV + SKRI+V EALQHPYI+ YDP PP ++P LD E+ E+ +++++
Sbjct: 299 SKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEW-KELIY 357
Query: 354 NETL 357
E +
Sbjct: 358 KEVM 361
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 253 bits (645), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/373 (40%), Positives = 224/373 (60%), Gaps = 31/373 (8%)
Query: 8 PNGMKSRGK---HYYT--MWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKK 62
P G SR K ++Y+ + + F + +Y +KPIG GA G+VC++ + VAIKK
Sbjct: 2 PLGSMSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKK 61
Query: 63 INNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLH 121
++ F+N+ A R RELVL++ + H N+I L +V P + F+DVY+V ELMD +L
Sbjct: 62 LSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLC 121
Query: 122 QIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR 181
Q+I+ L ++ Y ++Q+L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLAR
Sbjct: 122 QVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 179
Query: 182 TSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLN 241
T+ G MT YVVTR+YRAPE++L Y ++D+WSVGCI E++ K +FPG + ++
Sbjct: 180 TA-GTSFMMTPYVVTRYYRAPEVILGM-GYKENVDLWSVGCIMGEMVCHKILFPGRDYID 237
Query: 242 QLKLIISVFGTQQEADLEFID--NPKARRFIKSLPYSRGTHISSLYPQ----AD------ 289
Q +I GT EF+ P R ++++ P G L+P AD
Sbjct: 238 QWNKVIEQLGTPCP---EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKL 294
Query: 290 --PLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQ--CNPPAQVP-LSLDIDENIG 344
A DLL KMLV + SKRI+V EALQHPYI+ YDP PP ++P LD E+
Sbjct: 295 KASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTI 354
Query: 345 EQMIRQMMWNETL 357
E+ +++++ E +
Sbjct: 355 EEW-KELIYKEVM 366
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 252 bits (644), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 147/364 (40%), Positives = 219/364 (60%), Gaps = 28/364 (7%)
Query: 14 RGKHYYT--MWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI 71
R ++Y+ + + F + +Y +KPIG GA G+VC++ + VAIKK++ F+N+
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 72 DALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSL 130
A R RELVL++ + H N+I L +V P + F+DVY+V ELMD +L Q+I+ L
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MEL 123
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
++ Y ++Q+L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G M
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMM 182
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVF 250
T YVVTR+YRAPE++L Y ++D+WSVGCI E++ +FPGT+ ++Q +I
Sbjct: 183 TPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 251 GTQQEADLEFID--NPKARRFIKSLPYSRGTHISSLYPQ----AD--------PLALDLL 296
GT EF+ P R ++++ P G L+P AD A DLL
Sbjct: 242 GTPSP---EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 298
Query: 297 QKMLVFEPSKRITVTEALQHPYISGLYDPQ--CNPPAQVP-LSLDIDENIGEQMIRQMMW 353
KMLV + SKRI+V EALQHPYI+ YDP PP ++P LD E+ E+ +++++
Sbjct: 299 SKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEW-KELIY 357
Query: 354 NETL 357
E +
Sbjct: 358 KEVM 361
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 252 bits (644), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/364 (40%), Positives = 220/364 (60%), Gaps = 28/364 (7%)
Query: 14 RGKHYYT--MWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI 71
R ++Y+ + + F + +Y +KPIG GA G+VC++ + VAIKK++ F+N+
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 72 DALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSL 130
A R RELVL++ + H N+I L +V P + F+DVY+V ELMD +L Q+I+ L
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MEL 123
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
++ Y ++Q+L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G M
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMM 182
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVF 250
T YVVTR+YRAPE++L Y ++D+WSVGCI E++ +FPGT+ ++Q +I
Sbjct: 183 TPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 251 GTQQEADLEFID--NPKARRFIKSLPYSRGTHISSLYPQ----AD--------PLALDLL 296
GT EF+ P R ++++ P G L+P AD A DLL
Sbjct: 242 GTPCP---EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 298
Query: 297 QKMLVFEPSKRITVTEALQHPYISGLYDPQ--CNPPAQVP-LSLDIDENIGEQMIRQMMW 353
KMLV + SKRI+V EALQHPYI+ YDP PP ++P LD E+ E+ +++++
Sbjct: 299 SKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEW-KELIY 357
Query: 354 NETL 357
E +
Sbjct: 358 KEVM 361
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 252 bits (644), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 151/370 (40%), Positives = 223/370 (60%), Gaps = 31/370 (8%)
Query: 11 MKSRGK---HYYT--MWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINN 65
M SR K ++Y+ + + F + +Y +KPIG GA G+VC++ + VAIKK++
Sbjct: 1 MGSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR 60
Query: 66 VFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQII 124
F+N+ A R RELVL++ + H N+I L +V P + F+DVY+V ELMD +L Q+I
Sbjct: 61 PFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI 120
Query: 125 KSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSR 184
+ L ++ Y ++Q+L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+
Sbjct: 121 Q--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA- 177
Query: 185 GNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLK 244
G MT YVVTR+YRAPE++L Y ++D+WSVGCI E++ +FPGT+ ++Q
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWN 236
Query: 245 LIISVFGTQQEADLEFID--NPKARRFIKSLPYSRGTHISSLYPQ----AD--------P 290
+I GT EF+ P R ++++ P G L+P AD
Sbjct: 237 KVIEQLGTPCP---EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKAS 293
Query: 291 LALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQ--CNPPAQVP-LSLDIDENIGEQM 347
A DLL KMLV + SKRI+V EALQHPYI+ YDP PP ++P LD E+ E+
Sbjct: 294 QARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEW 353
Query: 348 IRQMMWNETL 357
+++++ E +
Sbjct: 354 -KELIYKEVM 362
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 252 bits (644), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/353 (40%), Positives = 214/353 (60%), Gaps = 26/353 (7%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLL 83
+ F + +Y +KPIG GA G+VC++ + + VAIKK++ F+N+ A R RELVL+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ + H N+I+L +V P + F+DVYLV ELMD +L Q+I+ L ++ Y ++Q+
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G MT YVVTR+YRAP
Sbjct: 136 LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I GT EF+
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP---EFMK 250
Query: 263 --NPKARRFIKSLPYSRGTHISSLYPQA------------DPLALDLLQKMLVFEPSKRI 308
P R ++++ P G L+P + A DLL KMLV +P+KRI
Sbjct: 251 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 309 TVTEALQHPYISGLYDP---QCNPPAQVPLSLDIDENIGEQMIRQMMWNETLH 358
+V +ALQHPYI+ YDP + PP LD E+ E+ +++++ E ++
Sbjct: 311 SVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEW-KELIYKEVMN 362
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 251 bits (642), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 142/353 (40%), Positives = 214/353 (60%), Gaps = 26/353 (7%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLL 83
+ F + +Y +KPIG GA G+VC++ + + VAIKK++ F+N+ A R RELVL+
Sbjct: 11 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 70
Query: 84 RHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ + H N+I+L +V P + F+DVYLV ELMD +L Q+I+ L ++ Y ++Q+
Sbjct: 71 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ--MELDHERMSYLLYQM 128
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G MT YVVTR+YRAP
Sbjct: 129 LXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 187
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I GT EF+
Sbjct: 188 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP---EFMK 243
Query: 263 --NPKARRFIKSLPYSRGTHISSLYPQA------------DPLALDLLQKMLVFEPSKRI 308
P R ++++ P G L+P + A DLL KMLV +P+KRI
Sbjct: 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 303
Query: 309 TVTEALQHPYISGLYDP---QCNPPAQVPLSLDIDENIGEQMIRQMMWNETLH 358
+V +ALQHPYI+ YDP + PP LD E+ E+ +++++ E ++
Sbjct: 304 SVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDEREHTIEEW-KELIYKEVMN 355
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 251 bits (640), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 146/364 (40%), Positives = 218/364 (59%), Gaps = 28/364 (7%)
Query: 14 RGKHYYT--MWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI 71
R ++Y+ + + F + +Y +KPIG GA G+VC++ + VAIKK++ F+N+
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 72 DALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSL 130
A R RELVL++ + H N+I L +V P + F+DVY+V ELMD +L Q+I+ L
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MEL 123
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
++ Y ++Q+L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G M
Sbjct: 124 DHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMM 182
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVF 250
T YVVTR+YRAPE++L Y ++D+WSVG I E++ +FPGT+ ++Q +I
Sbjct: 183 TPYVVTRYYRAPEVILGM-GYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 251 GTQQEADLEFID--NPKARRFIKSLPYSRGTHISSLYPQ----AD--------PLALDLL 296
GT EF+ P R ++++ P G L+P AD A DLL
Sbjct: 242 GTPSP---EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 298
Query: 297 QKMLVFEPSKRITVTEALQHPYISGLYDPQ--CNPPAQVP-LSLDIDENIGEQMIRQMMW 353
KMLV + SKRI+V EALQHPYI+ YDP PP ++P LD E+ E+ +++++
Sbjct: 299 SKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEW-KELIY 357
Query: 354 NETL 357
E +
Sbjct: 358 KEVM 361
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 251 bits (640), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 146/352 (41%), Positives = 214/352 (60%), Gaps = 26/352 (7%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLL 83
+ F + +Y +KPIG GA G+VC++ + VAIKK++ F+N+ A R RELVL+
Sbjct: 12 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLM 71
Query: 84 RHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ + H N+I L +V P + F+DVY+V ELMD +L Q+I+ L ++ Y ++Q+
Sbjct: 72 KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQM 129
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G MT YVVTR+YRAP
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 188
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I GT EF+
Sbjct: 189 EVILGM-GYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCP---EFMK 244
Query: 263 --NPKARRFIKSLPYSRGTHISSLYPQ----AD--------PLALDLLQKMLVFEPSKRI 308
P R ++++ P G L+P AD A DLL KMLV + SKRI
Sbjct: 245 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 304
Query: 309 TVTEALQHPYISGLYDPQ--CNPPAQVP-LSLDIDENIGEQMIRQMMWNETL 357
+V EALQHPYI+ YDP PP ++P LD E+ E+ +++++ E +
Sbjct: 305 SVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEW-KELIYKEVM 355
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/325 (42%), Positives = 199/325 (61%), Gaps = 20/325 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLL 83
+ F + +Y +KPIG GA G+VC++ + VA+KK++ F+N+ A R RELVLL
Sbjct: 16 STFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLL 75
Query: 84 RHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ + H N+I+L +V P + F+DVYLV ELMD +L Q+I L ++ Y ++Q+
Sbjct: 76 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIH--MELDHERMSYLLYQM 133
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ N MT YVVTR+YRAP
Sbjct: 134 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTN-FMMTPYVVTRYYRAP 192
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E++L Y ++D+WSVGCI E++ IF GT+ ++Q +I GT A+
Sbjct: 193 EVILGM-GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPS-AEFMAAL 250
Query: 263 NPKARRFIKSLPYSRGTHISSLYP--------QADPL----ALDLLQKMLVFEPSKRITV 310
P R ++++ P G L+P + D + A DLL KMLV +P KRI+V
Sbjct: 251 QPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISV 310
Query: 311 TEALQHPYISGLYDP--QCNPPAQV 333
EAL+HPYI+ YDP PP Q+
Sbjct: 311 DEALRHPYITVWYDPAEAEAPPPQI 335
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/364 (40%), Positives = 219/364 (60%), Gaps = 28/364 (7%)
Query: 14 RGKHYYT--MWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI 71
R ++Y+ + + F + +Y +KPIG GA G+VC++ + VAIKK++ F+N+
Sbjct: 8 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 67
Query: 72 DALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSL 130
A R RELVL++ + H N+I L +V P + F+DVY+V ELMD +L Q+I+ L
Sbjct: 68 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MEL 125
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
++ Y ++Q+L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G M
Sbjct: 126 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMM 184
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVF 250
+VVTR+YRAPE++L Y ++D+WSVGCI E++ +FPGT+ ++Q +I
Sbjct: 185 VPFVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 243
Query: 251 GTQQEADLEFID--NPKARRFIKSLPYSRGTHISSLYPQ----AD--------PLALDLL 296
GT EF+ P R ++++ P G L+P AD A DLL
Sbjct: 244 GTPCP---EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 300
Query: 297 QKMLVFEPSKRITVTEALQHPYISGLYDPQ--CNPPAQVP-LSLDIDENIGEQMIRQMMW 353
KMLV + SKRI+V EALQHPYI+ YDP PP ++P LD E+ E+ +++++
Sbjct: 301 SKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEW-KELIY 359
Query: 354 NETL 357
E +
Sbjct: 360 KEVM 363
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/364 (40%), Positives = 219/364 (60%), Gaps = 28/364 (7%)
Query: 14 RGKHYYT--MWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI 71
R ++Y+ + + F + +Y +KPIG GA G+VC++ + VAIKK++ F+N+
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 72 DALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSL 130
A R RELVL++ + H N+I L +V P + F+DVY+V ELMD +L Q+I+ L
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MEL 123
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
++ Y ++Q+L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G M
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMM 182
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVF 250
T VVTR+YRAPE++L Y ++D+WSVGCI E++ +FPGT+ ++Q +I
Sbjct: 183 TPEVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 251 GTQQEADLEFID--NPKARRFIKSLPYSRGTHISSLYPQ----AD--------PLALDLL 296
GT EF+ P R ++++ P G L+P AD A DLL
Sbjct: 242 GTPCP---EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLL 298
Query: 297 QKMLVFEPSKRITVTEALQHPYISGLYDPQ--CNPPAQVP-LSLDIDENIGEQMIRQMMW 353
KMLV + SKRI+V EALQHPYI+ YDP PP ++P LD E+ E+ +++++
Sbjct: 299 SKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEW-KELIY 357
Query: 354 NETL 357
E +
Sbjct: 358 KEVM 361
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/317 (42%), Positives = 197/317 (62%), Gaps = 22/317 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLL 83
+ F + +Y +KPIG GA G+VC++ + + VAIKK++ F+N+ A R RELVL+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHIKHDNVIALKDVMMPTHRI-SFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ + H N+I+L +V P + F+DVYLV ELMD +L Q+I+ L ++ Y ++Q+
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G MT YVVTR+YRAP
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I GT EF+
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP---EFMK 250
Query: 263 --NPKARRFIKSLPYSRGTHISSLYPQA------------DPLALDLLQKMLVFEPSKRI 308
P R ++++ P G L+P + A DLL KMLV +P+KRI
Sbjct: 251 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 309 TVTEALQHPYISGLYDP 325
+V +ALQHPYI+ YDP
Sbjct: 311 SVDDALQHPYINVWYDP 327
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 249 bits (635), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 212/352 (60%), Gaps = 22/352 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLL 83
+ F + +Y +KPIG GA G+VC++ + VA+KK++ F+N+ A R RELVLL
Sbjct: 18 STFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLL 77
Query: 84 RHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ + H N+I+L +V P + F+DVYLV ELMD +L Q+I L ++ Y ++Q+
Sbjct: 78 KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIH--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ N MT YVVTR+YRAP
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN-FMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E++L Y ++D+WSVGCI E++ IF GT+ ++Q +I GT A+
Sbjct: 195 EVILGM-GYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPS-AEFMAAL 252
Query: 263 NPKARRFIKSLPYSRGTHISSLYP--------QADPL----ALDLLQKMLVFEPSKRITV 310
P R ++++ P G L+P + D + A DLL KMLV +P KRI+V
Sbjct: 253 QPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISV 312
Query: 311 TEALQHPYISGLYDP---QCNPPAQVPLSLDIDENIGEQMIRQMMWNETLHY 359
EAL+HPYI+ YDP + PP L+ E+ E+ +++++ E + +
Sbjct: 313 DEALRHPYITVWYDPAEAEAPPPQIYDAQLEEREHAIEEW-KELIYKEVMDW 363
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 248 bits (634), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 145/362 (40%), Positives = 219/362 (60%), Gaps = 24/362 (6%)
Query: 14 RGKHYYT--MWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI 71
R ++Y+ + + F + +Y +KPIG GA G+VC++ + VAIKK++ F+N+
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 72 DALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSL 130
A R RELVL++ + H N+I L +V P + F+DVY+V ELMD +L Q+I+ L
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MEL 123
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
++ Y ++Q+L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G M
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMM 182
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVF 250
VVTR+YRAPE++L Y ++D+WSVGCI E++ K +FPG + ++Q +I
Sbjct: 183 EPEVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 241
Query: 251 GTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQ----AD--------PLALDLLQK 298
GT A ++ + P R ++++ P G L+P AD A DLL K
Sbjct: 242 GTPCPAFMKKL-QPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSK 300
Query: 299 MLVFEPSKRITVTEALQHPYISGLYDPQ--CNPPAQVP-LSLDIDENIGEQMIRQMMWNE 355
MLV + SKRI+V EALQHPYI+ YDP PP ++P LD E+ E+ +++++ E
Sbjct: 301 MLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEW-KELIYKE 359
Query: 356 TL 357
+
Sbjct: 360 VM 361
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 248 bits (633), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 145/364 (39%), Positives = 217/364 (59%), Gaps = 28/364 (7%)
Query: 14 RGKHYYT--MWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI 71
R ++Y+ + + F + +Y +KPIG GA G+V ++ + VAIKK++ F+N+
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQT 65
Query: 72 DALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSL 130
A R RELVL++ + H N+I L +V P + F+DVY+V ELMD +L Q+I+ L
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ--MEL 123
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
++ Y ++Q+L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G M
Sbjct: 124 DHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA-GTSFMM 182
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVF 250
T YVVTR+YRAPE++L Y ++D+WSVG I E++ +FPGT+ ++Q +I
Sbjct: 183 TPYVVTRYYRAPEVILGM-GYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 251 GTQQEADLEFID--NPKARRFIKSLPYSRGTHISSLYPQ----AD--------PLALDLL 296
GT EF+ P R ++++ P G L+P AD A DLL
Sbjct: 242 GTPSP---EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 298
Query: 297 QKMLVFEPSKRITVTEALQHPYISGLYDPQ--CNPPAQVP-LSLDIDENIGEQMIRQMMW 353
KMLV + SKRI+V EALQHPYI+ YDP PP ++P LD E+ E+ +++++
Sbjct: 299 SKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEW-KELIY 357
Query: 354 NETL 357
E +
Sbjct: 358 KEVM 361
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 247 bits (631), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 136/380 (35%), Positives = 202/380 (53%), Gaps = 55/380 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
IGRG+YG V + ++ N+ VAIKK+N +FE+ ID R LRE+ +L +K D +I L D+
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDL 95
Query: 98 MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHR 157
++P + F ++Y+V E+ D+DL ++ K+ L+ H K ++ LL G K++H + I+HR
Sbjct: 96 IIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHR 155
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSRGNEQF-------------------------MTE 192
DLKP N L+N +C +KICDFGLART ++ +T
Sbjct: 156 DLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQLTS 215
Query: 193 YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-----------GRKPIFPGTECL- 240
+VVTRWYRAPEL+L +NY SID+WS GCIFAE+L R P+FPG+ C
Sbjct: 216 HVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFP 275
Query: 241 ----------------NQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSL 284
+QL +I +V GT E DL+ I + ++IK P G +S
Sbjct: 276 LSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPTRDGIDLSKK 335
Query: 285 YPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPPAQVPLSLDIDE--N 342
Y +DLL+ ML F KRIT+ +AL HPY+ + + + L D+
Sbjct: 336 YSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKENLENFSTEKIILPFDDWMV 395
Query: 343 IGEQMIRQMMWNETLHYHPE 362
+ E +R + E +H +
Sbjct: 396 LSETQLRYIFLKEIQSFHAD 415
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/364 (40%), Positives = 218/364 (59%), Gaps = 28/364 (7%)
Query: 14 RGKHYYT--MWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI 71
R ++Y+ + + F + +Y +KPIG GA G+VC++ + VAIKK++ F+N+
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 72 DALRTLRELVLLRHIKHDNVIALKDVMMPTHRIS-FKDVYLVYELMDTDLHQIIKSSQSL 130
A R RELVL++ + H N+I L +V P + F+DVY+V ELMD +L Q+I+ L
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MEL 123
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
++ Y ++Q+L G+K+LHSA I+HRDLKP N++V ++C LKI DFGLART+ G M
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-GTSFMM 182
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVF 250
VVTR+YRAPE++L Y ++D+WSVGCI E++ K +FPG + ++Q +I
Sbjct: 183 EPEVVTRYYRAPEVILGM-GYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 241
Query: 251 GTQQEADLEFID--NPKARRFIKSLPYSRGTHISSLYPQ----AD--------PLALDLL 296
GT EF+ P R ++++ P G L+P AD A DLL
Sbjct: 242 GTPCP---EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 298
Query: 297 QKMLVFEPSKRITVTEALQHPYISGLYDPQ--CNPPAQVP-LSLDIDENIGEQMIRQMMW 353
KMLV + SKRI+V EALQHPYI+ YDP PP ++P LD E+ E+ +++++
Sbjct: 299 SKMLVIDASKRISVDEALQHPYINVWYDPSEAEAPPPKIPDKQLDEREHTIEEW-KELIY 357
Query: 354 NETL 357
E +
Sbjct: 358 KEVM 361
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 243 bits (619), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 133/315 (42%), Positives = 195/315 (61%), Gaps = 22/315 (6%)
Query: 24 TLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLL 83
+ F + +Y +KPIG GA G+VC++ + + VAIKK++ F+N+ A R RELVL+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLM 77
Query: 84 RHIKHDNVIALKDVMMPTHRI-SFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ + H N+I+L +V P + F+DVYLV ELMD +L Q+I+ L ++ Y ++Q+
Sbjct: 78 KXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQM 135
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L G+K+LHSA I+HRDLKP N++V ++ LKI DFGLART+ G MT YVVTR+YRAP
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA-GTSFMMTPYVVTRYYRAP 194
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E++L Y ++D+WSVGCI E++ K +FPG + ++Q +I GT EF+
Sbjct: 195 EVILGM-GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP---EFMK 250
Query: 263 --NPKARRFIKSLPYSRGTHISSLYPQA------------DPLALDLLQKMLVFEPSKRI 308
P R ++++ P G L+P + A DLL KMLV +P+KRI
Sbjct: 251 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Query: 309 TVTEALQHPYISGLY 323
+V +ALQHPYI+ Y
Sbjct: 311 SVDDALQHPYINVWY 325
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 234 bits (597), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 131/350 (37%), Positives = 197/350 (56%), Gaps = 25/350 (7%)
Query: 10 GMKSRGKHYY-TMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI-NNVF 67
GM+++G+ + L + + Y + I G+YG VC+ ++ E VAIK++ N V
Sbjct: 1 GMQAKGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVS 59
Query: 68 ENRI-----DAL---RTLRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD 119
+ R D+ R LRE+ LL H H N++ L+D+ + + +YLV ELM TD
Sbjct: 60 DGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD 119
Query: 120 LHQIIKSSQ-SLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFG 178
L Q+I + +S H +YF++ +L GL LH A ++HRDL PGN+L+ N D+ ICDF
Sbjct: 120 LAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFN 179
Query: 179 LARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTE 238
LAR + T YV RWYRAPEL++ + +D+WS GC+ AE+ RK +F G+
Sbjct: 180 LAREDTADAN-KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST 238
Query: 239 CLNQLKLIISVFGTQQEADLEFIDNPKARRFIK-SLPYSRGTHISSLYPQADPLALDLLQ 297
NQL I+ V GT + D+ +P AR +++ SL +++ P ADP+ALDL+
Sbjct: 239 FYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIA 298
Query: 298 KMLVFEPSKRITVTEALQHPYISGLYDPQCNPPAQVPLSLDIDENIGEQM 347
KML F P +RI+ +AL+HPY L+DP LD+ E + E+
Sbjct: 299 KMLEFNPQRRISTEQALRHPYFESLFDP-----------LDLTEGLSERF 337
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 232 bits (592), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 189/334 (56%), Gaps = 24/334 (7%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI-NNVFENRI-----DAL---R 75
L + + Y + I G+YG VC+ ++ E VAIK++ N V + R D+ R
Sbjct: 17 LHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 76 TLRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ-SLSNDH 134
LRE+ LL H H N++ L+D+ + + +YLV ELM TDL Q+I + +S H
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH 135
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYV 194
+YF++ +L GL LH A ++HRDL PGN+L+ N D+ ICDF LAR + T YV
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN-KTHYV 194
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQ 254
RWYRAPEL++ + +D+WS GC+ AE+ RK +F G+ NQL I+ V GT +
Sbjct: 195 THRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK 254
Query: 255 EADLEFIDNPKARRFIK-SLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEA 313
D+ +P AR +++ SL +++ P ADP+ALDL+ KML F P +RI+ +A
Sbjct: 255 IEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA 314
Query: 314 LQHPYISGLYDPQCNPPAQVPLSLDIDENIGEQM 347
L+HPY L+DP LD+ E + E+
Sbjct: 315 LRHPYFESLFDP-----------LDLTEGLSERF 337
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 188/319 (58%), Gaps = 21/319 (6%)
Query: 26 FEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRH 85
F++ ++Y+ +KP+G G G+V S+++ + +++VAIKKI V + LRE+ ++R
Sbjct: 7 FDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKI--VLTDPQSVKHALREIKIIRR 64
Query: 86 IKHDNVIALKDVMMPTHR---------ISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCK 136
+ HDN++ + +++ P+ VY+V E M+TDL +++ L +H +
Sbjct: 65 LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG-PLLEEHAR 123
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNA-NCDLKICDFGLART---SRGNEQFMTE 192
F++QLLRGLKY+HSAN+LHRDLKP NL +N + LKI DFGLAR ++ ++E
Sbjct: 124 LFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSE 183
Query: 193 YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGT 252
+VT+WYR+P LLL +NY +ID+W+ GCIFAE+L K +F G L Q++LI+
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243
Query: 253 QQEADLEFIDN--PKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITV 310
E D + + + P R + P+ ++ L P A+D L+++L F P R+T
Sbjct: 244 VHEEDRQELLSVIPVYIRNDMTEPHKP---LTQLLPGISREAVDFLEQILTFSPMDRLTA 300
Query: 311 TEALQHPYISGLYDPQCNP 329
EAL HPY+S P P
Sbjct: 301 EEALSHPYMSIYSFPMDEP 319
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 207 bits (527), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 168/300 (56%), Gaps = 15/300 (5%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
KY ++ IG G YG V + NRET+E VA+K++ ++ LRE+ LL+ +KH N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQS-LSNDHCKYFVFQLLRGLKYL 149
++ L DV+ S K + LV+E D DL + S L + K F+FQLL+GL +
Sbjct: 63 IVRLHDVLH-----SDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS N+LHRDLKP NLL+N N +LK+ DFGLAR + + VVT WYR P++L
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 210 NYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
Y TSID+WS GCIFAE+ +P+FPG + +QLK I + GT E P +
Sbjct: 178 LYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQW-----PSMTK 232
Query: 269 FIKSLP---YSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P Y T + ++ P+ + DLLQ +L P +RI+ EALQHPY S P
Sbjct: 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 204 bits (520), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 168/300 (56%), Gaps = 15/300 (5%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
KY ++ IG G YG V + NRET+E VA+K++ ++ LRE+ LL+ +KH N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQS-LSNDHCKYFVFQLLRGLKYL 149
++ L DV+ S K + LV+E D DL + S L + K F+FQLL+GL +
Sbjct: 63 IVRLHDVLH-----SDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS N+LHRDLKP NLL+N N +LK+ +FGLAR + + VVT WYR P++L
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177
Query: 210 NYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
Y TSID+WS GCIFAE+ +P+FPG + +QLK I + GT E P +
Sbjct: 178 LYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQW-----PSMTK 232
Query: 269 FIKSLP---YSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P Y T + ++ P+ + DLLQ +L P +RI+ EALQHPY S P
Sbjct: 233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 163/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 75 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 189
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 190 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 247
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 248 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 300
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 163/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 72 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 186
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 244
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 245 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 297
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 163/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 68 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 163/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 67 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 239
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 163/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 68 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 163/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 68 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 163/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 67 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 239
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 163/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 69 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 183
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 241
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 197 bits (502), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 118/314 (37%), Positives = 179/314 (57%), Gaps = 28/314 (8%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELV 81
+Q L E KY ++ +G G YGVV + + + VA+K+I E+ +RE+
Sbjct: 16 FQGLME---KYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREIS 71
Query: 82 LLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQS-LSNDHCKYFVF 140
LL+ + H N+++L DV+ S + + LV+E M+ DL +++ +++ L + K +++
Sbjct: 72 LLKELHHPNIVSLIDVIH-----SERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLY 126
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
QLLRG+ + H ILHRDLKP NLL+N++ LK+ DFGLAR + T VVT WYR
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYR 186
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEF 260
AP++L+ Y TS+D+WS+GCIFAE++ KP+FPG +QL I S+ GT
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP------- 239
Query: 261 IDNPKARRFIKSLPYSRGTHI--------SSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
NP+ ++ LP + SS+ P +DLL ML F+P+KRI+ +
Sbjct: 240 --NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARD 297
Query: 313 ALQHPYISGLYDPQ 326
A+ HPY L DPQ
Sbjct: 298 AMNHPYFKDL-DPQ 310
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 197 bits (502), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 118/314 (37%), Positives = 179/314 (57%), Gaps = 28/314 (8%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELV 81
+Q L E KY ++ +G G YGVV + + + VA+K+I E+ +RE+
Sbjct: 16 FQGLME---KYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREIS 71
Query: 82 LLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQS-LSNDHCKYFVF 140
LL+ + H N+++L DV+ S + + LV+E M+ DL +++ +++ L + K +++
Sbjct: 72 LLKELHHPNIVSLIDVIH-----SERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLY 126
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
QLLRG+ + H ILHRDLKP NLL+N++ LK+ DFGLAR + T VVT WYR
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYR 186
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEF 260
AP++L+ Y TS+D+WS+GCIFAE++ KP+FPG +QL I S+ GT
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP------- 239
Query: 261 IDNPKARRFIKSLPYSRGTHI--------SSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
NP+ ++ LP + SS+ P +DLL ML F+P+KRI+ +
Sbjct: 240 --NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARD 297
Query: 313 ALQHPYISGLYDPQ 326
A+ HPY L DPQ
Sbjct: 298 AMNHPYFKDL-DPQ 310
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 197 bits (500), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 163/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E +D DL + + +S + K ++FQLL+GL + HS
Sbjct: 71 LDVIHTENKL-----YLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 243
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 71 LDVIHTENKL-----YLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 126 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 243
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 69 LDVIHTENKL-----YLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 241
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 71 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 243
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 70 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 242
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 70 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 242
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 68 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 69 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 241
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 68 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 70 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 125 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 242
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 67 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 239
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 69 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 241
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 161/293 (54%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 69
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + +S + K ++FQLL+GL + HS
Sbjct: 70 LDVIHTENKL-----YLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 184
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 185 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 242
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 243 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 295
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 71 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 243
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 71
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 72 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 186
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 187 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 244
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 245 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 297
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 68
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 69 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 183
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 184 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 241
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 294
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 68 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+ KI E +RE+ LL+ + H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 68 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 182
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+ KI E +RE+ LL+ + H N++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 67 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 239
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 67 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 181
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 239
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 161/293 (54%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + +S + K ++FQLL+GL + HS
Sbjct: 71 LDVIHTENKL-----YLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 243
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 195 bits (496), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 66
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + +S + K ++FQLL+GL + HS
Sbjct: 67 LDVIHTENKL-----YLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL C Y
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYS 181
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 182 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 239
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 240 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 292
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 195 bits (496), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 161/293 (54%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + +S + K ++FQLL+GL + HS
Sbjct: 68 LDVIHTENKL-----YLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 123 RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 195 bits (495), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 161/293 (54%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 70
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + +S + K ++FQLL+GL + HS
Sbjct: 71 LDVIHTENKL-----YLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 185
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 186 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 243
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 296
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 194 bits (494), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 74
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 75 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL Y
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYS 189
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 190 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 247
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 248 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 300
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 194 bits (493), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 162/293 (55%), Gaps = 9/293 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 68 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + T VVT WYRAPE+LL Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYS 182
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
P S + P D LL +ML ++P+KRI+ AL HP+ + P
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP 293
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 109/287 (37%), Positives = 160/287 (55%), Gaps = 9/287 (3%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG G YGVV + N+ T E VA+KKI E +RE+ LL+ + H N++ L
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKL 67
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHSA 152
DV+ +++ YLV+E + DL + + +S + K ++FQLL+GL + HS
Sbjct: 68 LDVIHTENKL-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+LHRDLKP NLL+N +K+ DFGLAR + VVT WYRAPE+LL C Y
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYS 182
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
T++D+WS+GCIFAE++ R+ +FPG ++QL I GT E + + + S
Sbjct: 183 TAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPDYKPS 240
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
P S + P D LL +ML ++P+KRI+ AL HP+
Sbjct: 241 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 167/308 (54%), Gaps = 14/308 (4%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRT-LRELVLLRHIK 87
+Y + +G G + V + ++ TN+ VAIKKI + E + RT LRE+ LL+ +
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIK-SSQSLSNDHCKYFVFQLLRGL 146
H N+I L D IS LV++ M+TDL IIK +S L+ H K ++ L+GL
Sbjct: 71 HPNIIGLLDAFGHKSNIS-----LVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGL 125
Query: 147 KYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
+YLH ILHRDLKP NLL++ N LK+ DFGLA++ + VVTRWYRAPELL
Sbjct: 126 EYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLF 185
Query: 207 CCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKA 266
YG +D+W+VGCI AE+L R P PG L+QL I GT E + +
Sbjct: 186 GARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPD 245
Query: 267 RRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQ 326
KS P G + ++ A LDL+Q + +F P RIT T+AL+ Y S P
Sbjct: 246 YVTFKSFP---GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN--RPG 300
Query: 327 CNPPAQVP 334
P Q+P
Sbjct: 301 PTPGCQLP 308
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 192 bits (488), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 160/293 (54%), Gaps = 10/293 (3%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y+ + +G G Y V ++ T+ VA+K+I E +RE+ LL+ +KH N+
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPC-TAIREVSLLKDLKHANI 62
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDH-CKYFVFQLLRGLKYLH 150
+ L D++ + K + LV+E +D DL Q + ++ N H K F+FQLLRGL Y H
Sbjct: 63 VTLHDIIH-----TEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH 117
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
+LHRDLKP NLL+N +LK+ DFGLAR + VVT WYR P++LL +
Sbjct: 118 RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTD 177
Query: 211 YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI-DNPKARRF 269
Y T ID+W VGCIF E+ +P+FPG+ QL I + GT E I N + + +
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY 237
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGL 322
+ P R + S P+ D DLL K+L FE RI+ +A++HP+ L
Sbjct: 238 --NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL 288
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 161/294 (54%), Gaps = 17/294 (5%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
KY ++ IG G YGVV + N E A+KKI E+ T+RE+ +L+ +KH N
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQS-LSNDHCKYFVFQLLRGLKYL 149
++ L DV+ R+ LV+E +D DL +++ + L + K F+ QLL G+ Y
Sbjct: 62 IVKLYDVIHTKKRL-----VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
H +LHRDLKP NLL+N +LKI DFGLAR + T VVT WYRAP++L+
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN-PKAR- 267
Y T+ID+WSVGCIFAE++ P+FPG +QL I + GT + + PK
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 268 --RFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+ LP+ S D +DLL KML +P++RIT +AL+H Y
Sbjct: 237 NFTVYEPLPW------ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 161/294 (54%), Gaps = 17/294 (5%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
KY ++ IG G YGVV + N E A+KKI E+ T+RE+ +L+ +KH N
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQS-LSNDHCKYFVFQLLRGLKYL 149
++ L DV+ R+ LV+E +D DL +++ + L + K F+ QLL G+ Y
Sbjct: 62 IVKLYDVIHTKKRL-----VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
H +LHRDLKP NLL+N +LKI DFGLAR + T VVT WYRAP++L+
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSK 176
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN-PKAR- 267
Y T+ID+WSVGCIFAE++ P+FPG +QL I + GT + + PK
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 268 --RFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+ LP+ S D +DLL KML +P++RIT +AL+H Y
Sbjct: 237 NFTVYEPLPW------ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/294 (38%), Positives = 161/294 (54%), Gaps = 17/294 (5%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
KY ++ IG G YGVV + N E A+KKI E+ T+RE+ +L+ +KH N
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQS-LSNDHCKYFVFQLLRGLKYL 149
++ L DV+ R+ LV+E +D DL +++ + L + K F+ QLL G+ Y
Sbjct: 62 IVKLYDVIHTKKRL-----VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
H +LHRDLKP NLL+N +LKI DFGLAR + T +VT WYRAP++L+
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSK 176
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN-PKAR- 267
Y T+ID+WSVGCIFAE++ P+FPG +QL I + GT + + PK
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDP 236
Query: 268 --RFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+ LP+ S D +DLL KML +P++RIT +AL+H Y
Sbjct: 237 NFTVYEPLPW------ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/324 (37%), Positives = 173/324 (53%), Gaps = 14/324 (4%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEK-VAIKKINNVFENRIDALRTLRELVLL 83
L D +Y + IG GAYG V + + + + VA+K++ L T+RE+ +L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 84 RHIK---HDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKS--SQSLSNDHCKYF 138
RH++ H NV+ L DV + + LV+E +D DL + + + K
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 139 VFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW 198
+FQLLRGL +LHS ++HRDLKP N+LV ++ +K+ DFGLAR + +T VVT W
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY-SFQMALTSVVVTLW 184
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
YRAPE+LL +Y T +D+WSVGCIFAE+ RKP+F G+ ++QL I+ V G E D
Sbjct: 185 YRAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 259 EFIDNPKARRFIKSLPYSRGTH-ISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHP 317
P+ + +S+ I D L DLL K L F P+KRI+ AL HP
Sbjct: 244 -----PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 298
Query: 318 YISGLYDPQCNPPAQVPLSLDIDE 341
Y L + N + +P S + E
Sbjct: 299 YFQDLERCKENLDSHLPPSQNTSE 322
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 166/305 (54%), Gaps = 19/305 (6%)
Query: 30 TKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD 89
+++ ++ +G G Y V +N+ T VA+K++ E + +RE+ L++ +KH+
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPS-TAIREISLMKELKHE 63
Query: 90 NVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSS------QSLSNDHCKYFVFQLL 143
N++ L DV+ ++++ LV+E MD DL + + S + L + KYF +QLL
Sbjct: 64 NIVRLYDVIHTENKLT-----LVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 144 RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPE 203
+GL + H ILHRDLKP NLL+N LK+ DFGLAR + VVT WYRAP+
Sbjct: 119 QGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPD 178
Query: 204 LLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN 263
+L+ Y TSID+WS GCI AE++ KP+FPGT QLKLI + GT E+ +
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTK 238
Query: 264 -PKARRFIKSLPYSRGTHISSLYPQA-DPL---ALDLLQKMLVFEPSKRITVTEALQHPY 318
PK I+ P + L P +PL +D L +L P R++ +AL HP+
Sbjct: 239 LPKYNPNIQQRPPRDLRQV--LQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296
Query: 319 ISGLY 323
+ Y
Sbjct: 297 FAEYY 301
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 184 bits (466), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 116/305 (38%), Positives = 165/305 (54%), Gaps = 14/305 (4%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEK-VAIKKINNVFENRIDALRTLRELVLL 83
L D +Y + IG GAYG V + + + + VA+K++ L T+RE+ +L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 84 RHIK---HDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKS--SQSLSNDHCKYF 138
RH++ H NV+ L DV + + LV+E +D DL + + + K
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 139 VFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW 198
+FQLLRGL +LHS ++HRDLKP N+LV ++ +K+ DFGLAR + +T VVT W
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY-SFQMALTSVVVTLW 184
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
YRAPE+LL +Y T +D+WSVGCIFAE+ RKP+F G+ ++QL I+ V G E D
Sbjct: 185 YRAPEVLLQS-SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 259 EFIDNPKARRFIKSLPYSRGTH-ISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHP 317
P+ + +S+ I D L DLL K L F P+KRI+ AL HP
Sbjct: 244 -----PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP 298
Query: 318 YISGL 322
Y L
Sbjct: 299 YFQDL 303
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 163/298 (54%), Gaps = 14/298 (4%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEK-VAIKKINNVFENRIDALRTLRELVLLRHIK 87
D +Y + IG GAYG V + + + + VA+K++ L T+RE+ +LRH++
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE 69
Query: 88 ---HDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKS--SQSLSNDHCKYFVFQL 142
H NV+ L DV + + LV+E +D DL + + + K +FQL
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
LRGL +LHS ++HRDLKP N+LV ++ +K+ DFGLAR + +T VVT WYRAP
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY-SFQMALTSVVVTLWYRAP 188
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E+LL +Y T +D+WSVGCIFAE+ RKP+F G+ ++QL I+ V G E D
Sbjct: 189 EVLLQS-SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW---- 243
Query: 263 NPKARRFIKSLPYSRGTH-ISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
P+ + +S+ I D L DLL K L F P+KRI+ AL HPY
Sbjct: 244 -PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 165/302 (54%), Gaps = 14/302 (4%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
+Y I +G G YG V +I+ TNE VAIK+I E +RE+ LL+ ++H N
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+I LK V+ HR+ +L++E + DL + + + +S K F++QL+ G+ + H
Sbjct: 95 IIELKSVIHHNHRL-----HLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH 149
Query: 151 SANILHRDLKPGNLLVNANCD-----LKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL 205
S LHRDLKP NLL++ + LKI DFGLAR + T ++T WYR PE+L
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEIL 209
Query: 206 LCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPK 265
L +Y TS+D+WS+ CI+AE+L + P+FPG ++QL I V G D +
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPD--DTTWPGVTA 267
Query: 266 ARRFIKSLPYSRGTHISS-LYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS-GLY 323
+ +S P RG + L D LDLL ML +P KRI+ AL+HPY S +
Sbjct: 268 LPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDF 327
Query: 324 DP 325
DP
Sbjct: 328 DP 329
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 160/302 (52%), Gaps = 24/302 (7%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
KY I IG G+YGVV NR+T + VAIKK ++ + LRE+ +L+ +KH N
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMD-TDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
++ L +V R+ +LV+E D T LH++ + + + K +Q L+ + +
Sbjct: 64 LVNLLEVFRRKRRL-----HLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFC 118
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
H N +HRD+KP N+L+ + +K+CDFG AR G + + V TRWYR+PELL+
Sbjct: 119 HKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDT 178
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
YG +DVW++GC+FAE+L P++PG ++QL LI G DL P+ ++
Sbjct: 179 QYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLG-----DL----IPRHQQV 229
Query: 270 IKSLPYSRGTHISS---------LYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS 320
+ Y G I +P AL LL+ L +P++R+T + L HPY
Sbjct: 230 FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE 289
Query: 321 GL 322
+
Sbjct: 290 NI 291
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 158/299 (52%), Gaps = 16/299 (5%)
Query: 30 TKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI---NNVFENRIDALRTLRELVLLRHI 86
++Y P+ IG GAYG V + + + VA+K + N + T+RE+ LLR +
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRL 68
Query: 87 K---HDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQ 141
+ H NV+ L DV + V LV+E +D DL + + L + K + Q
Sbjct: 69 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 128
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRA 201
LRGL +LH+ I+HRDLKP N+LV + +K+ DFGLAR + +T VVT WYRA
Sbjct: 129 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY-SYQMALTPVVVTLWYRA 187
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE+LL Y T +D+WSVGCIFAE+ RKP+F G +QL I + G E D
Sbjct: 188 PEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW--- 243
Query: 262 DNPKARRFIKSLPYSRGTH-ISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
P+ + RG + S+ P+ + LL +ML F P KRI+ ALQH Y+
Sbjct: 244 --PRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 160/306 (52%), Gaps = 16/306 (5%)
Query: 30 TKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIK-- 87
++Y P+ IG GAYG V + + + VA+K + + T+RE+ LLR ++
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 88 -HDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLR 144
H NV+ L DV + V LV+E +D DL + + L + K + Q LR
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
GL +LH+ I+HRDLKP N+LV + +K+ DFGLAR + + VVT WYRAPE+
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY-SYQMALAPVVVTLWYRAPEV 182
Query: 205 LLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNP 264
LL Y T +D+WSVGCIFAE+ RKP+F G +QL I + G E D P
Sbjct: 183 LLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW-----P 236
Query: 265 KARRFIKSLPYSRGTH-ISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLY 323
+ + RG + S+ P+ + LL +ML F P KRI+ ALQH Y L+
Sbjct: 237 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY---LH 293
Query: 324 DPQCNP 329
+ NP
Sbjct: 294 KDEGNP 299
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 160/306 (52%), Gaps = 16/306 (5%)
Query: 30 TKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIK-- 87
++Y P+ IG GAYG V + + + VA+K + + T+RE+ LLR ++
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 88 -HDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLR 144
H NV+ L DV + V LV+E +D DL + + L + K + Q LR
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
GL +LH+ I+HRDLKP N+LV + +K+ DFGLAR + + VVT WYRAPE+
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY-SYQMALDPVVVTLWYRAPEV 182
Query: 205 LLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNP 264
LL Y T +D+WSVGCIFAE+ RKP+F G +QL I + G E D P
Sbjct: 183 LLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW-----P 236
Query: 265 KARRFIKSLPYSRGTH-ISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLY 323
+ + RG + S+ P+ + LL +ML F P KRI+ ALQH Y L+
Sbjct: 237 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY---LH 293
Query: 324 DPQCNP 329
+ NP
Sbjct: 294 KDEGNP 299
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 173 bits (438), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 160/306 (52%), Gaps = 16/306 (5%)
Query: 30 TKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIK-- 87
++Y P+ IG GAYG V + + + VA+K + + T+RE+ LLR ++
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 88 -HDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYFVFQLLR 144
H NV+ L DV + V LV+E +D DL + + L + K + Q LR
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
GL +LH+ I+HRDLKP N+LV + +K+ DFGLAR + + VVT WYRAPE+
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIY-SYQMALFPVVVTLWYRAPEV 182
Query: 205 LLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNP 264
LL Y T +D+WSVGCIFAE+ RKP+F G +QL I + G E D P
Sbjct: 183 LLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW-----P 236
Query: 265 KARRFIKSLPYSRGTH-ISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLY 323
+ + RG + S+ P+ + LL +ML F P KRI+ ALQH Y L+
Sbjct: 237 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY---LH 293
Query: 324 DPQCNP 329
+ NP
Sbjct: 294 KDEGNP 299
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 156/296 (52%), Gaps = 6/296 (2%)
Query: 26 FEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRH 85
F+ KY + +G G+YG+V N++T VAIKK ++++ +RE+ LL+
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 86 IKHDNVIALKDVMMPTHRISFKDVYLVYELMD-TDLHQIIKSSQSLSNDHCKYFVFQLLR 144
++H+N++ L +V R YLV+E +D T L + L + ++FQ++
Sbjct: 81 LRHENLVNLLEVCKKKKRW-----YLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIIN 135
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
G+ + HS NI+HRD+KP N+LV+ + +K+CDFG ART + + V TRWYRAPEL
Sbjct: 136 GIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPEL 195
Query: 205 LLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNP 264
L+ YG ++DVW++GC+ E+ +P+FPG ++QL I+ G E +
Sbjct: 196 LVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN 255
Query: 265 KARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS 320
++ + YP+ + +DL +K L +P KR E L H +
Sbjct: 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 169/316 (53%), Gaps = 31/316 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ F+NR EL ++R +
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKL 70
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 71 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLART-SRGNEQFMTEYVVTRW 198
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ RG Y+ +R+
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 187
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
YRAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 259 EFIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 248 REM-NPNYTEFAFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 315 QHPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 302 AHSFFDELRDPNVKLP 317
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 169/316 (53%), Gaps = 31/316 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ F+NR EL ++R +
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKL 70
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 71 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLART-SRGNEQFMTEYVVTRW 198
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ RG Y+ +R+
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 187
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
YRAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 259 EFIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 248 REM-NPNYTEFKFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 315 QHPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 302 AHSFFDELRDPNVKLP 317
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 170/316 (53%), Gaps = 31/316 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ + F+NR EL ++R +
Sbjct: 24 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 75
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 76 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 134
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLART-SRGNEQFMTEYVVTRW 198
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ RG Y+ +R+
Sbjct: 135 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 192
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
YRAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 252
Query: 259 EFIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 253 REM-NPNYTEFKFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 306
Query: 315 QHPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 307 AHSFFDELRDPNVKLP 322
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 170/316 (53%), Gaps = 31/316 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ + F+NR EL ++R +
Sbjct: 55 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 106
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 107 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 165
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLART-SRGNEQFMTEYVVTRW 198
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ RG Y+ +R+
Sbjct: 166 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 223
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
YRAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 283
Query: 259 EFIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 284 REM-NPNYTEFKFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 337
Query: 315 QHPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 338 AHSFFDELRDPNVKLP 353
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 170/316 (53%), Gaps = 31/316 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ + F+NR EL ++R +
Sbjct: 47 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 98
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 99 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 157
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLART-SRGNEQFMTEYVVTRW 198
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ RG Y+ +R+
Sbjct: 158 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 215
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
YRAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 275
Query: 259 EFIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 276 REM-NPNYTEFKFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 329
Query: 315 QHPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 330 AHSFFDELRDPNVKLP 345
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 170/316 (53%), Gaps = 31/316 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ + F+NR EL ++R +
Sbjct: 98 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 149
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 150 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 208
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLART-SRGNEQFMTEYVVTRW 198
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ RG Y+ +R+
Sbjct: 209 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 266
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
YRAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 326
Query: 259 EFIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 327 REM-NPNYTEFKFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 380
Query: 315 QHPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 381 AHSFFDELRDPNVKLP 396
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 170/316 (53%), Gaps = 31/316 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ + F+NR EL ++R +
Sbjct: 32 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 83
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 84 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 142
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLART-SRGNEQFMTEYVVTRW 198
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ RG Y+ +R+
Sbjct: 143 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 200
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
YRAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 260
Query: 259 EFIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 261 REM-NPNYTEFKFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 314
Query: 315 QHPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 315 AHSFFDELRDPNVKLP 330
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 170/316 (53%), Gaps = 31/316 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ + F+NR EL ++R +
Sbjct: 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 104
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 105 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLART-SRGNEQFMTEYVVTRW 198
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ RG Y+ +R+
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 221
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
YRAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281
Query: 259 EFIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 282 REM-NPNYTEFKFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 335
Query: 315 QHPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 336 AHSFFDELRDPNVKLP 351
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 170/316 (53%), Gaps = 31/316 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ + F+NR EL ++R +
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 70
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 71 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLART-SRGNEQFMTEYVVTRW 198
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ RG Y+ +R+
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 187
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
YRAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 259 EFIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 248 REM-NPNYTEFKFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 315 QHPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 302 AHSFFDELRDPNVKLP 317
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/316 (34%), Positives = 170/316 (53%), Gaps = 31/316 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ + F+NR EL ++R +
Sbjct: 57 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 108
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 109 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 167
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLART-SRGNEQFMTEYVVTRW 198
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ RG Y+ +R+
Sbjct: 168 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN--VSYICSRY 225
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
YRAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 285
Query: 259 EFIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 286 REM-NPNYTEFKFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 339
Query: 315 QHPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 340 AHSFFDELRDPNVKLP 355
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 169/315 (53%), Gaps = 29/315 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ F+NR EL ++R +
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR--------ELQIMRKL 70
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 71 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSRGNEQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ E ++ + +R+Y
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRYY 188
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLE 259
RAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 260 FIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 249 EM-NPNYTEFAFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 316 HPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 303 HSFFDELRDPNVKLP 317
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 170/315 (53%), Gaps = 29/315 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ + F+NR EL ++R +
Sbjct: 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 104
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 105 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 163
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSRGNEQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ E ++ + +R+Y
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRYY 222
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLE 259
RAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 223 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 282
Query: 260 FIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 283 EM-NPNYTEFKFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336
Query: 316 HPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 337 HSFFDELRDPNVKLP 351
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 170/315 (53%), Gaps = 29/315 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ + F+NR EL ++R +
Sbjct: 23 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 74
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 75 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 133
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSRGNEQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ E ++ + +R+Y
Sbjct: 134 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRYY 192
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLE 259
RAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 193 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 252
Query: 260 FIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 253 EM-NPNYTEFKFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 306
Query: 316 HPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 307 HSFFDELRDPNVKLP 321
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 170/316 (53%), Gaps = 31/316 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ + F+NR EL ++R +
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 70
Query: 87 KHDNVIALKDVMMPTHRISFKDVY---LVYELMDTDLHQIIK----SSQSLSNDHCKYFV 139
H N++ L+ + KDV LV + + ++++ + + Q+L + K ++
Sbjct: 71 DHCNIVRLRYFFYSSGEK--KDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM 128
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSRGNEQFMTEYVVTRW 198
+QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ E ++ + +R+
Sbjct: 129 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRY 187
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
YRAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247
Query: 259 EFIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 248 REM-NPNYTEFKFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 315 QHPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 302 AHSFFDELRDPNVKLP 317
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 170/315 (53%), Gaps = 29/315 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ + F+NR EL ++R +
Sbjct: 31 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 82
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 83 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 141
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSRGNEQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ E ++ + +R+Y
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRYY 200
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLE 259
RAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 260
Query: 260 FIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 261 EM-NPNYTEFKFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 314
Query: 316 HPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 315 HSFFDELRDPNVKLP 329
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 170/315 (53%), Gaps = 29/315 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ + F+NR EL ++R +
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 70
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 71 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSRGNEQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ E ++ + +R+Y
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRYY 188
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLE 259
RAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 260 FIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 249 EM-NPNYTEFKFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 316 HPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 303 HSFFDELRDPNVKLP 317
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 170/315 (53%), Gaps = 29/315 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ + F+NR EL ++R +
Sbjct: 31 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 82
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 83 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 141
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSRGNEQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ E ++ + +R+Y
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRYY 200
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLE 259
RAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 201 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 260
Query: 260 FIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 261 EM-NPNYTEFKFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 314
Query: 316 HPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 315 HSFFDELRDPNVKLP 329
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 170/315 (53%), Gaps = 29/315 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ + F+NR EL ++R +
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 70
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 71 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 129
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSRGNEQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ E ++ + +R+Y
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRYY 188
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLE 259
RAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 189 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 260 FIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 249 EM-NPNYTEFKFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
Query: 316 HPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 303 HSFFDELRDPNVKLP 317
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 170/315 (53%), Gaps = 29/315 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ + F+NR EL ++R +
Sbjct: 20 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 71
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 72 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 130
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSRGNEQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ E ++ + +R+Y
Sbjct: 131 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRYY 189
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLE 259
RAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 190 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 249
Query: 260 FIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 250 EM-NPNYTEFKFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 303
Query: 316 HPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 304 HSFFDELRDPNVKLP 318
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 170/315 (53%), Gaps = 29/315 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ + F+NR EL ++R +
Sbjct: 38 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 89
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 90 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 148
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSRGNEQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ E ++ + +R+Y
Sbjct: 149 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRYY 207
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLE 259
RAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 208 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 267
Query: 260 FIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 268 EM-NPNYTEFKFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 321
Query: 316 HPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 322 HSFFDELRDPNVKLP 336
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 170/315 (53%), Gaps = 29/315 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + ++ E VAIKK+ + F+NR EL ++R +
Sbjct: 27 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIMRKL 78
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQIIK----SSQSLSNDHCKYFVF 140
H N++ L+ + +VYL V + + ++++ + + Q+L + K +++
Sbjct: 79 DHCNIVRLRYFFYSSGEKK-DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMY 137
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSRGNEQFMTEYVVTRWY 199
QL R L Y+HS I HRD+KP NLL++ + LK+CDFG A+ E ++ + +R+Y
Sbjct: 138 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSX-ICSRYY 196
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLE 259
RAPEL+ +Y +SIDVWS GC+ AE+L +PIFPG ++QL II V GT +
Sbjct: 197 RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 256
Query: 260 FIDNPKARRF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
+ NP F IK+ P+++ P+ P A+ L ++L + P+ R+T EA
Sbjct: 257 EM-NPNYTEFKFPQIKAHPWTK-----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 310
Query: 316 HPYISGLYDPQCNPP 330
H + L DP P
Sbjct: 311 HSFFDELRDPNVKLP 325
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 171/306 (55%), Gaps = 28/306 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHI 86
+ Y K IG G++GVV + E++E VAIKK+ + F+NR EL ++R +
Sbjct: 39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNR--------ELQIMRIV 89
Query: 87 KHDNVIALKDVMMPTHRISFKDVYL--VYELMDTDLHQI----IKSSQSLSNDHCKYFVF 140
KH NV+ LK ++ +V+L V E + +++ K Q++ K +++
Sbjct: 90 KHPNVVDLKAFFY-SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMY 148
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSRGNEQFMTEYVVTRWY 199
QLLR L Y+HS I HRD+KP NLL++ LK+ DFG A+ E ++ + +R+Y
Sbjct: 149 QLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSX-ICSRYY 207
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLE 259
RAPEL+ NY T+ID+WS GC+ AE++ +P+FPG ++QL II V GT ++
Sbjct: 208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIK 267
Query: 260 FID-NPKARRF--IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQH 316
++ N +F I+ P+S+ P+ P A+DL+ ++L + PS R+T EAL H
Sbjct: 268 TMNPNYMEHKFPQIRPHPFSK-----VFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322
Query: 317 PYISGL 322
P+ L
Sbjct: 323 PFFDEL 328
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 161/302 (53%), Gaps = 15/302 (4%)
Query: 30 TKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA--LRTLRELVLLRHIK 87
+KY + IG+G +G V + +R+T +KVA+KK+ + EN + + LRE+ +L+ +K
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITALREIKILQLLK 75
Query: 88 HDNVIALKDV----MMPTHRISFKDVYLVYELMDTDLHQIIKSS-QSLSNDHCKYFVFQL 142
H+NV+ L ++ P +R +YLV++ + DL ++ + + K + L
Sbjct: 76 HENVVNLIEICRTKASPYNRCK-GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML 134
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEY---VVTRW 198
L GL Y+H ILHRD+K N+L+ + LK+ DFGLAR S Y VVT W
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
YR PELLL +YG ID+W GCI AE+ R PI G +QL LI + G+
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 259 EFIDNPKARRFIKSLPYSRGTHISSLYPQA-DPLALDLLQKMLVFEPSKRITVTEALQHP 317
+DN + ++ + + L DP ALDL+ K+LV +P++RI +AL H
Sbjct: 255 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 314
Query: 318 YI 319
+
Sbjct: 315 FF 316
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 158/300 (52%), Gaps = 11/300 (3%)
Query: 30 TKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD 89
+KY + IG+G +G V + +R+T +KVA+KK+ E + LRE+ +L+ +KH+
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 90 NVIALKDV----MMPTHRISFKDVYLVYELMDTDLHQIIKSS-QSLSNDHCKYFVFQLLR 144
NV+ L ++ P +R +YLV++ + DL ++ + + K + LL
Sbjct: 78 NVVNLIEICRTKASPYNRCK-ASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEY---VVTRWYR 200
GL Y+H ILHRD+K N+L+ + LK+ DFGLAR S Y VVT WYR
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEF 260
PELLL +YG ID+W GCI AE+ R PI G +QL LI + G+
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 261 IDNPKARRFIKSLPYSRGTHISSLYPQA-DPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+DN + ++ + + L DP ALDL+ K+LV +P++RI +AL H +
Sbjct: 257 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 158/300 (52%), Gaps = 11/300 (3%)
Query: 30 TKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD 89
+KY + IG+G +G V + +R+T +KVA+KK+ E + LRE+ +L+ +KH+
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 76
Query: 90 NVIALKDV----MMPTHRISFKDVYLVYELMDTDLHQIIKSS-QSLSNDHCKYFVFQLLR 144
NV+ L ++ P +R +YLV++ + DL ++ + + K + LL
Sbjct: 77 NVVNLIEICRTKASPYNRCK-GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 135
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEY---VVTRWYR 200
GL Y+H ILHRD+K N+L+ + LK+ DFGLAR S Y VVT WYR
Sbjct: 136 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 195
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEF 260
PELLL +YG ID+W GCI AE+ R PI G +QL LI + G+
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 255
Query: 261 IDNPKARRFIKSLPYSRGTHISSLYPQA-DPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+DN + ++ + + L DP ALDL+ K+LV +P++RI +AL H +
Sbjct: 256 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 158/300 (52%), Gaps = 11/300 (3%)
Query: 30 TKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD 89
+KY + IG+G +G V + +R+T +KVA+KK+ E + LRE+ +L+ +KH+
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 90 NVIALKDV----MMPTHRISFKDVYLVYELMDTDLHQIIKSS-QSLSNDHCKYFVFQLLR 144
NV+ L ++ P +R +YLV++ + DL ++ + + K + LL
Sbjct: 78 NVVNLIEICRTKASPYNRCK-GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLN 136
Query: 145 GLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEY---VVTRWYR 200
GL Y+H ILHRD+K N+L+ + LK+ DFGLAR S Y VVT WYR
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEF 260
PELLL +YG ID+W GCI AE+ R PI G +QL LI + G+
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPN 256
Query: 261 IDNPKARRFIKSLPYSRGTHISSLYPQA-DPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+DN + ++ + + L DP ALDL+ K+LV +P++RI +AL H +
Sbjct: 257 VDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 154 bits (388), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 167/331 (50%), Gaps = 49/331 (14%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
KY K +G G++G+VC + E+ ++ A+KK+ D REL +++ + H N
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQ------DPRYKNRELDIMKVLDHVN 61
Query: 91 VIALKDVMMPT--------------------------HRISF-------KDVYLVYELMD 117
+I L D T H S K + ++ E +
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP 121
Query: 118 TDLHQI----IKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCD-L 172
LH++ I+S +S+ + +++QL R + ++HS I HRD+KP NLLVN+ + L
Sbjct: 122 DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTL 181
Query: 173 KICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKP 232
K+CDFG A+ +E + + +R+YRAPEL+L Y SID+WS+GC+F E++ KP
Sbjct: 182 KLCDFGSAKKLIPSEPSVAX-ICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240
Query: 233 IFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADP-L 291
+F G ++QL II + GT + + + NP P + + P+ P L
Sbjct: 241 LFSGETSIDQLVRIIQIMGTPTKEQMIRM-NPHYTEV--RFPTLKAKDWRKILPEGTPSL 297
Query: 292 ALDLLQKMLVFEPSKRITVTEALQHPYISGL 322
A+DLL+++L +EP RI EA+ HP+ L
Sbjct: 298 AIDLLEQILRYEPDLRINPYEAMAHPFFDHL 328
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 110/316 (34%), Positives = 163/316 (51%), Gaps = 24/316 (7%)
Query: 39 GRGAYGVVCSSINRETNEKVAIKKI--NNVFENRIDALRTLRELVLLRHIKHDNVIALKD 96
G+G +G V + T VAIKK+ + F NR L+ +++L +L H N++ L+
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNR--ELQIMQDLAVLHH---PNIVQLQS 86
Query: 97 VMMPTHRISFKDVYL--VYELMDTDLHQIIKS----SQSLSNDHCKYFVFQLLRGLKYLH 150
+D+YL V E + LH+ ++ + K F+FQL+R + LH
Sbjct: 87 YFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH 146
Query: 151 --SANILHRDLKPGNLLVN-ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLC 207
S N+ HRD+KP N+LVN A+ LK+CDFG A+ +E + Y+ +R+YRAPEL+
Sbjct: 147 LPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA-YICSRYYRAPELIFG 205
Query: 208 CDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKAR 267
+Y T++D+WSVGCIFAE++ +PIF G QL I+ V G L + NP
Sbjct: 206 NQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKL-NPSHT 264
Query: 268 RF----IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLY 323
K +P+S SL + A DLL +L + P +R+ EAL HPY L+
Sbjct: 265 DVDLYNSKGIPWSNVFSDHSLKDAKE--AYDLLSALLQYLPEERMKPYEALCHPYFDELH 322
Query: 324 DPQCNPPAQVPLSLDI 339
DP P L D+
Sbjct: 323 DPATKLPNNKDLPEDL 338
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 167/322 (51%), Gaps = 43/322 (13%)
Query: 38 IGRGAYGVV--CSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALK 95
+GRG YG V + + ++ A+K+I E ++ RE+ LLR +KH NVI+L+
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTGISMSACREIALLRELKHPNVISLQ 84
Query: 96 DVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQS---------LSNDHCKYFVFQLLRGL 146
V + +H + + V+L+++ + DL IIK ++ L K ++Q+L G+
Sbjct: 85 KVFL-SH--ADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI 141
Query: 147 KYLHSANILHRDLKPGNLLVNANCD----LKICDFGLARTSRGNEQFMTEY---VVTRWY 199
YLH+ +LHRDLKP N+LV +KI D G AR + + + VVT WY
Sbjct: 142 HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY 201
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTE---------CLNQLKLIISVF 250
RAPELLL +Y +ID+W++GCIFAE+L +PIF + +QL I +V
Sbjct: 202 RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM 261
Query: 251 GTQQEADLEFIDN-PKARRFIKSLPYSRGTHISSL------YPQADPLALDLLQKMLVFE 303
G + D E I P+ +K + T+ S + + D A LLQK+L +
Sbjct: 262 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMD 321
Query: 304 PSKRITVTEALQHPYISGLYDP 325
P KRIT +A+Q PY L DP
Sbjct: 322 PIKRITSEQAMQDPYF--LEDP 341
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 145 bits (365), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 166/305 (54%), Gaps = 36/305 (11%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD-N 90
Y ++ +GRG Y V +IN NEKV +K + V +N+I RE+ +L +++ N
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIK-----REIKILENLRGGPN 93
Query: 91 VIALKDVMM-PTHRISFKDVYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
+I L D++ P R LV+E + +TD Q+ Q+L++ +++++++L+ L Y
Sbjct: 94 IITLADIVKDPVSRTPA----LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDY 146
Query: 149 LHSANILHRDLKPGNLLVN-ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLC 207
HS I+HRD+KP N++++ + L++ D+GLA +++ V +R+++ PELL+
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPELLVD 205
Query: 208 CDNYGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGTQQ----------EA 256
Y S+D+WS+GC+ A ++ RK P F G + +QL I V GT+ E
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL 265
Query: 257 DLEFID--NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
D F D +R+ + +S H+ S P ALD L K+L ++ R+T EA+
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVS------PEALDFLDKLLRYDHQSRLTAREAM 319
Query: 315 QHPYI 319
+HPY
Sbjct: 320 EHPYF 324
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 163/316 (51%), Gaps = 42/316 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA----LRTLRELVLLRHIK 87
Y ++ +GRG Y V +IN NEKVA+K + V + +I L LR
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLR--------G 90
Query: 88 HDNVIALKDVMM-PTHRISFKDVYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
N+I L D++ P R LV+E + +TD Q+ Q+L++ +++++++L+
Sbjct: 91 GPNIITLADIVKDPVSRTPA----LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKA 143
Query: 146 LKYLHSANILHRDLKPGNLLVN-ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
L Y HS I+HRD+KP N+L++ + L++ D+GLA +++ V +R+++ PEL
Sbjct: 144 LDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPEL 202
Query: 205 LLCCDNYGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGTQQ--------- 254
L+ Y S+D+WS+GC+ A ++ RK P F G + +QL I V GT+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 255 -EADLEFID--NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E D F D +R+ + +S H+ S P ALD L K+L ++ R+T
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVS------PEALDFLDKLLRYDHQSRLTAR 316
Query: 312 EALQHPYISGLYDPQC 327
EA++HPY + Q
Sbjct: 317 EAMEHPYFYTVVKDQA 332
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 165/324 (50%), Gaps = 44/324 (13%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
+Y +K IG+G++G V + + + ++ VA+K + N A +R L LR DN
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 91 VIALKDVMMPTHRISFKD-VYLVYELMDTDLHQIIKSS--QSLSNDHCKYFVFQLLRGLK 147
+ +V+ +F++ + + +EL+ +L+++IK + Q S + F +L+ L
Sbjct: 158 TM---NVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 148 YLHSANILHRDLKPGNLLV--NANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL 205
LH I+H DLKP N+L+ +K+ DFG +S Q + + +R+YRAPE++
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG---SSCYEHQRVYTXIQSRFYRAPEVI 271
Query: 206 LCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPK 265
L YG ID+WS+GCI AE+L P+ PG + +QL +I + G + L+ + +
Sbjct: 272 LGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLD--ASKR 328
Query: 266 ARRFIKSLPYSRGTHISSLY-------------------PQA-----------DPLALDL 295
A+ F+ Y R +++L P++ DPL LD
Sbjct: 329 AKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDF 388
Query: 296 LQKMLVFEPSKRITVTEALQHPYI 319
L++ L ++P+ R+T +AL+HP++
Sbjct: 389 LKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 165/324 (50%), Gaps = 44/324 (13%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
+Y +K IG+G++G V + + + ++ VA+K + N A +R L LR DN
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 91 VIALKDVMMPTHRISFKD-VYLVYELMDTDLHQIIKSS--QSLSNDHCKYFVFQLLRGLK 147
+ +V+ +F++ + + +EL+ +L+++IK + Q S + F +L+ L
Sbjct: 158 TM---NVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 148 YLHSANILHRDLKPGNLLV--NANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL 205
LH I+H DLKP N+L+ +K+ DFG +S Q + + +R+YRAPE++
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG---SSCYEHQRVYTXIQSRFYRAPEVI 271
Query: 206 LCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPK 265
L YG ID+WS+GCI AE+L P+ PG + +QL +I + G + L+ + +
Sbjct: 272 LGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLD--ASKR 328
Query: 266 ARRFIKSLPYSRGTHISSLY-------------------PQA-----------DPLALDL 295
A+ F+ Y R +++L P++ DPL LD
Sbjct: 329 AKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDF 388
Query: 296 LQKMLVFEPSKRITVTEALQHPYI 319
L++ L ++P+ R+T +AL+HP++
Sbjct: 389 LKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 130 bits (326), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 164/324 (50%), Gaps = 44/324 (13%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
+Y +K IG+G +G V + + + ++ VA+K + N A +R L LR DN
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 91 VIALKDVMMPTHRISFKD-VYLVYELMDTDLHQIIKSS--QSLSNDHCKYFVFQLLRGLK 147
+ +V+ +F++ + + +EL+ +L+++IK + Q S + F +L+ L
Sbjct: 158 TM---NVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 148 YLHSANILHRDLKPGNLLV--NANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL 205
LH I+H DLKP N+L+ +K+ DFG +S Q + + +R+YRAPE++
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFG---SSCYEHQRVYXXIQSRFYRAPEVI 271
Query: 206 LCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPK 265
L YG ID+WS+GCI AE+L P+ PG + +QL +I + G + L+ + +
Sbjct: 272 LGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLD--ASKR 328
Query: 266 ARRFIKSLPYSRGTHISSLY-------------------PQA-----------DPLALDL 295
A+ F+ Y R +++L P++ DPL LD
Sbjct: 329 AKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDF 388
Query: 296 LQKMLVFEPSKRITVTEALQHPYI 319
L++ L ++P+ R+T +AL+HP++
Sbjct: 389 LKQCLEWDPAVRMTPGQALRHPWL 412
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 99/319 (31%), Positives = 165/319 (51%), Gaps = 40/319 (12%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA----LRTLRELVLLRHIK 87
Y ++ +GRG Y V +IN NE+V +K + V + +I L LR
Sbjct: 40 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRGGT------ 93
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMD-TDLHQIIKSSQSLSNDHCKYFVFQLLRGL 146
N+I L D + +S K LV+E ++ TD Q+ Q L++ ++++++LL+ L
Sbjct: 94 --NIIKLIDTVKDP--VS-KTPALVFEYINNTDFKQLY---QILTDFDIRFYMYELLKAL 145
Query: 147 KYLHSANILHRDLKPGNLLVN-ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL 205
Y HS I+HRD+KP N++++ L++ D+GLA +++ V +R+++ PELL
Sbjct: 146 DYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVR-VASRYFKGPELL 204
Query: 206 LCCDNYGTSIDVWSVGCIFAE-ILGRKPIFPGTECLNQLKLIISVFGTQQ---------- 254
+ Y S+D+WS+GC+ A I R+P F G + +QL I V GT++
Sbjct: 205 VDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHI 264
Query: 255 EADLEFID--NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ D F D +R+ ++ +S H+ S P ALDLL K+L ++ +R+T E
Sbjct: 265 DLDPHFNDILGQHSRKRWENFIHSENRHLVS------PEALDLLDKLLRYDHQQRLTAKE 318
Query: 313 ALQHPYISGLYDPQCNPPA 331
A++HPY + Q P A
Sbjct: 319 AMEHPYFYPVVKEQSQPSA 337
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 144/293 (49%), Gaps = 39/293 (13%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
+Y + +G+G++G V +R T ++ A+K IN D LRE+ LL+ + H N
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 91 VIALKDVMMPTHRISF-KDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
++ L +++ + ++Y EL D +IIK + +D + + Q+ G+ Y+
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFD----EIIKRKRFSEHDAAR-IIKQVFSGITYM 137
Query: 150 HSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
H NI+HRDLKP N+L+ + +CD+KI DFGL+ + N + M + + T +Y APE+L
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEVLR 196
Query: 207 CCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKA 266
Y DVWS G I +L P F G + LK + +
Sbjct: 197 GT--YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV------------------ET 236
Query: 267 RRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
++ LP R A DL++KML F PS RIT T+ L+HP+I
Sbjct: 237 GKYAFDLPQWRTISDD---------AKDLIRKMLTFHPSLRITATQCLEHPWI 280
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 140/286 (48%), Gaps = 39/286 (13%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G++G V +R T ++ A+K IN D LRE+ LL+ + H N++ L ++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 98 MMPTHRISF-KDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILH 156
+ + ++Y EL D +IIK + +D + + Q+ G+ Y+H NI+H
Sbjct: 90 LEDSSSFYIVGELYTGGELFD----EIIKRKRFSEHDAAR-IIKQVFSGITYMHKHNIVH 144
Query: 157 RDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGT 213
RDLKP N+L+ + +CD+KI DFGL+ + N + M + + T +Y APE+L Y
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEVLR--GTYDE 201
Query: 214 SIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSL 273
DVWS G I +L P F G + LK + E D P+ R
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRV--------ETGKYAFDLPQWRTISDD- 252
Query: 274 PYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
A DL++KML F PS RIT T+ L+HP+I
Sbjct: 253 ------------------AKDLIRKMLTFHPSLRITATQCLEHPWI 280
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 164/320 (51%), Gaps = 42/320 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA----LRTLRELVLLRHIK 87
Y ++ +GRG Y V +IN NEKV +K + V + +I L LR
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--------G 90
Query: 88 HDNVIALKDVMM-PTHRISFKDVYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
N+I L D++ P R LV+E + +TD Q+ Q+L++ +++++++L+
Sbjct: 91 GPNIITLADIVKDPVSRTPA----LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKA 143
Query: 146 LKYLHSANILHRDLKPGNLLVN-ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
L Y HS I+HRD+KP N++++ + L++ D+GLA +++ V +R+++ PEL
Sbjct: 144 LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPEL 202
Query: 205 LLCCDNYGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGTQQ--------- 254
L+ Y S+D+WS+GC+ A ++ RK P F G + +QL I V GT+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 255 -EADLEFID--NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E D F D +R+ + +S H+ S P ALD L K+L ++ R+T
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVS------PEALDFLDKLLRYDHQSRLTAR 316
Query: 312 EALQHPYISGLYDPQCNPPA 331
EA++HPY + Q P A
Sbjct: 317 EAMEHPYFYPVVKEQSQPCA 336
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 140/286 (48%), Gaps = 39/286 (13%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G++G V +R T ++ A+K IN D LRE+ LL+ + H N++ L ++
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 98 MMPTHRISF-KDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILH 156
+ + ++Y EL D +IIK + +D + + Q+ G+ Y+H NI+H
Sbjct: 90 LEDSSSFYIVGELYTGGELFD----EIIKRKRFSEHDAAR-IIKQVFSGITYMHKHNIVH 144
Query: 157 RDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGT 213
RDLKP N+L+ + +CD+KI DFGL+ + N + M + + T +Y APE+L Y
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEVLR--GTYDE 201
Query: 214 SIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSL 273
DVWS G I +L P F G + LK + E D P+ R
Sbjct: 202 KCDVWSAGVILYILLSGTPPFYGKNEYDILKRV--------ETGKYAFDLPQWRTISDD- 252
Query: 274 PYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
A DL++KML F PS RIT T+ L+HP+I
Sbjct: 253 ------------------AKDLIRKMLTFHPSLRITATQCLEHPWI 280
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 124 bits (312), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 162/316 (51%), Gaps = 42/316 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA----LRTLRELVLLRHIK 87
Y ++ +GRG Y V +IN NEKV +K + V + +I L LR
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--------G 90
Query: 88 HDNVIALKDVMM-PTHRISFKDVYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
N+I L D++ P R LV+E + +TD Q+ Q+L++ +++++++L+
Sbjct: 91 GPNIITLADIVKDPVSRTPA----LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKA 143
Query: 146 LKYLHSANILHRDLKPGNLLVN-ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
L Y HS I+HRD+KP N++++ + L++ D+GLA +++ V +R+++ PEL
Sbjct: 144 LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPEL 202
Query: 205 LLCCDNYGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGTQQ--------- 254
L+ Y S+D+WS+GC+ A ++ RK P F G + +QL I V GT+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 255 -EADLEFID--NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E D F D +R+ + +S H+ S P ALD L K+L ++ R+T
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVS------PEALDFLDKLLRYDHQSRLTAR 316
Query: 312 EALQHPYISGLYDPQC 327
EA++HPY + Q
Sbjct: 317 EAMEHPYFYTVVKDQA 332
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 162/316 (51%), Gaps = 42/316 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA----LRTLRELVLLRHIK 87
Y ++ +GRG Y V +IN NEKV +K + V + +I L LR
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--------G 90
Query: 88 HDNVIALKDVMM-PTHRISFKDVYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
N+I L D++ P R LV+E + +TD Q+ Q+L++ +++++++L+
Sbjct: 91 GPNIITLADIVKDPVSRTPA----LVFEHVNNTDFKQL---RQTLTDYDIRFYMYEILKA 143
Query: 146 LKYLHSANILHRDLKPGNLLVN-ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
L Y HS I+HRD+KP N++++ + L++ D+GLA +++ V +R+++ PEL
Sbjct: 144 LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPEL 202
Query: 205 LLCCDNYGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGTQQ--------- 254
L+ Y S+D+WS+GC+ A ++ RK P F G + +QL I V GT+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 255 -EADLEFID--NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E D F D +R+ + +S H+ S P ALD L K+L ++ R+T
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVS------PEALDFLDKLLRYDHQSRLTAR 316
Query: 312 EALQHPYISGLYDPQC 327
EA++HPY + Q
Sbjct: 317 EAMEHPYFYTVVKDQA 332
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 162/316 (51%), Gaps = 42/316 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA----LRTLRELVLLRHIK 87
Y ++ +GRG Y V +IN NEKV +K + V + +I L LR
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--------G 90
Query: 88 HDNVIALKDVMM-PTHRISFKDVYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
N+I L D++ P R LV+E + +TD Q+ Q+L++ +++++++L+
Sbjct: 91 GPNIITLADIVKDPVSRTPA----LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKA 143
Query: 146 LKYLHSANILHRDLKPGNLLVN-ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
L Y HS I+HRD+KP N++++ + L++ D+GLA +++ V +R+++ PEL
Sbjct: 144 LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPEL 202
Query: 205 LLCCDNYGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGTQQ--------- 254
L+ Y S+D+WS+GC+ A ++ RK P F G + +QL I V GT+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 255 -EADLEFID--NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E D F D +R+ + +S H+ S P ALD L K+L ++ R+T
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVS------PEALDFLDKLLRYDHQSRLTAR 316
Query: 312 EALQHPYISGLYDPQC 327
EA++HPY + Q
Sbjct: 317 EAMEHPYFYTVVKDQA 332
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 162/316 (51%), Gaps = 42/316 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA----LRTLRELVLLRHIK 87
Y ++ +GRG Y V +IN NEKV +K + V + +I L LR
Sbjct: 44 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--------G 95
Query: 88 HDNVIALKDVMM-PTHRISFKDVYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
N+I L D++ P R LV+E + +TD Q+ Q+L++ +++++++L+
Sbjct: 96 GPNIITLADIVKDPVSRTPA----LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKA 148
Query: 146 LKYLHSANILHRDLKPGNLLVN-ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
L Y HS I+HRD+KP N++++ + L++ D+GLA +++ V +R+++ PEL
Sbjct: 149 LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPEL 207
Query: 205 LLCCDNYGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGTQQ--------- 254
L+ Y S+D+WS+GC+ A ++ RK P F G + +QL I V GT+
Sbjct: 208 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 267
Query: 255 -EADLEFID--NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E D F D +R+ + +S H+ S P ALD L K+L ++ R+T
Sbjct: 268 IELDPRFNDILGRHSRKRWERFVHSENQHLVS------PEALDFLDKLLRYDHQSRLTAR 321
Query: 312 EALQHPYISGLYDPQC 327
EA++HPY + Q
Sbjct: 322 EAMEHPYFYTVVKDQA 337
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 162/316 (51%), Gaps = 42/316 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA----LRTLRELVLLRHIK 87
Y ++ +GRG Y V +IN NEKV +K + V + +I L LR
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--------G 90
Query: 88 HDNVIALKDVMM-PTHRISFKDVYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
N+I L D++ P R LV+E + +TD Q+ Q+L++ +++++++L+
Sbjct: 91 GPNIITLADIVKDPVSRTPA----LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKA 143
Query: 146 LKYLHSANILHRDLKPGNLLVN-ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
L Y HS I+HRD+KP N++++ + L++ D+GLA +++ V +R+++ PEL
Sbjct: 144 LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPEL 202
Query: 205 LLCCDNYGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGTQQ--------- 254
L+ Y S+D+WS+GC+ A ++ RK P F G + +QL I V GT+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 255 -EADLEFID--NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E D F D +R+ + +S H+ S P ALD L K+L ++ R+T
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVS------PEALDFLDKLLRYDHQSRLTAR 316
Query: 312 EALQHPYISGLYDPQC 327
EA++HPY + Q
Sbjct: 317 EAMEHPYFYTVVKDQA 332
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 124 bits (311), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 162/316 (51%), Gaps = 42/316 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA----LRTLRELVLLRHIK 87
Y ++ +GRG Y V +IN NEKV +K + V + +I L LR
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--------G 90
Query: 88 HDNVIALKDVMM-PTHRISFKDVYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
N+I L D++ P R LV+E + +TD Q+ Q+L++ +++++++L+
Sbjct: 91 GPNIITLADIVKDPVSRTPA----LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKA 143
Query: 146 LKYLHSANILHRDLKPGNLLVN-ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
L Y HS I+HRD+KP N++++ + L++ D+GLA +++ V +R+++ PEL
Sbjct: 144 LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPEL 202
Query: 205 LLCCDNYGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGTQQ--------- 254
L+ Y S+D+WS+GC+ A ++ RK P F G + +QL I V GT+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 255 -EADLEFID--NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E D F D +R+ + +S H+ S P ALD L K+L ++ R+T
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVS------PEALDFLDKLLRYDHQSRLTAR 316
Query: 312 EALQHPYISGLYDPQC 327
EA++HPY + Q
Sbjct: 317 EAMEHPYFYTVVKDQA 332
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 162/316 (51%), Gaps = 42/316 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA----LRTLRELVLLRHIK 87
Y ++ +GRG Y V +IN NEKV +K + V + +I L LR
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--------G 90
Query: 88 HDNVIALKDVMM-PTHRISFKDVYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
N+I L D++ P R LV+E + +TD Q+ Q+L++ +++++++L+
Sbjct: 91 GPNIITLADIVKDPVSRTPA----LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKA 143
Query: 146 LKYLHSANILHRDLKPGNLLVN-ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
L Y HS I+HRD+KP N++++ + L++ D+GLA +++ V +R+++ PEL
Sbjct: 144 LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPEL 202
Query: 205 LLCCDNYGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGTQQ--------- 254
L+ Y S+D+WS+GC+ A ++ RK P F G + +QL I V GT+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 255 -EADLEFID--NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E D F D +R+ + +S H+ S P ALD L K+L ++ R+T
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVS------PEALDFLDKLLRYDHQSRLTAR 316
Query: 312 EALQHPYISGLYDPQC 327
EA++HPY + Q
Sbjct: 317 EAMEHPYFYTVVKDQA 332
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 162/316 (51%), Gaps = 42/316 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA----LRTLRELVLLRHIK 87
Y ++ +GRG Y V +IN NEKV +K + V + +I L LR
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--------G 89
Query: 88 HDNVIALKDVMM-PTHRISFKDVYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
N+I L D++ P R LV+E + +TD Q+ Q+L++ +++++++L+
Sbjct: 90 GPNIITLADIVKDPVSRTPA----LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKA 142
Query: 146 LKYLHSANILHRDLKPGNLLVN-ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
L Y HS I+HRD+KP N++++ + L++ D+GLA +++ V +R+++ PEL
Sbjct: 143 LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPEL 201
Query: 205 LLCCDNYGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGTQQ--------- 254
L+ Y S+D+WS+GC+ A ++ RK P F G + +QL I V GT+
Sbjct: 202 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261
Query: 255 -EADLEFID--NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E D F D +R+ + +S H+ S P ALD L K+L ++ R+T
Sbjct: 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVS------PEALDFLDKLLRYDHQSRLTAR 315
Query: 312 EALQHPYISGLYDPQC 327
EA++HPY + Q
Sbjct: 316 EAMEHPYFYTVVKDQA 331
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 162/316 (51%), Gaps = 42/316 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA----LRTLRELVLLRHIK 87
Y ++ +GRG Y V +IN NEKV +K + V + +I L LR
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--------G 90
Query: 88 HDNVIALKDVMM-PTHRISFKDVYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
N+I L D++ P R LV+E + +TD Q+ Q+L++ +++++++L+
Sbjct: 91 GPNIITLADIVKDPVSRTPA----LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKA 143
Query: 146 LKYLHSANILHRDLKPGNLLVN-ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
L Y HS I+HRD+KP N++++ + L++ D+GLA +++ V +R+++ PEL
Sbjct: 144 LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPEL 202
Query: 205 LLCCDNYGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGTQQ--------- 254
L+ Y S+D+WS+GC+ A ++ RK P F G + +QL I V GT+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 255 -EADLEFID--NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E D F D +R+ + +S H+ S P ALD L K+L ++ R+T
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVS------PEALDFLDKLLRYDHQSRLTAR 316
Query: 312 EALQHPYISGLYDPQC 327
EA++HPY + Q
Sbjct: 317 EAMEHPYFYTVVKDQA 332
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 160/308 (51%), Gaps = 42/308 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA----LRTLRELVLLRHIK 87
Y ++ +GRG Y V +IN NEKV +K + V + +I L LR
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--------G 89
Query: 88 HDNVIALKDVMM-PTHRISFKDVYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
N+I L D++ P R LV+E + +TD Q+ Q+L++ +++++++L+
Sbjct: 90 GPNIITLADIVKDPVSRTPA----LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKA 142
Query: 146 LKYLHSANILHRDLKPGNLLVN-ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
L Y HS I+HRD+KP N++++ + L++ D+GLA +++ V +R+++ PEL
Sbjct: 143 LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPEL 201
Query: 205 LLCCDNYGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGTQQ--------- 254
L+ Y S+D+WS+GC+ A ++ RK P F G + +QL I V GT+
Sbjct: 202 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 261
Query: 255 -EADLEFID--NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E D F D +R+ + +S H+ S P ALD L K+L ++ R+T
Sbjct: 262 IELDPRFNDILGRHSRKRWERFVHSENQHLVS------PEALDFLDKLLRYDHQSRLTAR 315
Query: 312 EALQHPYI 319
EA++HPY
Sbjct: 316 EAMEHPYF 323
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 160/308 (51%), Gaps = 42/308 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA----LRTLRELVLLRHIK 87
Y ++ +GRG Y V +IN NEKV +K + V + +I L LR
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--------G 90
Query: 88 HDNVIALKDVMM-PTHRISFKDVYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
N+I L D++ P R LV+E + +TD Q+ Q+L++ +++++++L+
Sbjct: 91 GPNIITLADIVKDPVSRTPA----LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKA 143
Query: 146 LKYLHSANILHRDLKPGNLLVN-ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
L Y HS I+HRD+KP N++++ + L++ D+GLA +++ V +R+++ PEL
Sbjct: 144 LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPEL 202
Query: 205 LLCCDNYGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGTQQ--------- 254
L+ Y S+D+WS+GC+ A ++ RK P F G + +QL I V GT+
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 255 -EADLEFID--NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E D F D +R+ + +S H+ S P ALD L K+L ++ R+T
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVS------PEALDFLDKLLRYDHQSRLTAR 316
Query: 312 EALQHPYI 319
EA++HPY
Sbjct: 317 EAMEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 160/308 (51%), Gaps = 42/308 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA----LRTLRELVLLRHIK 87
Y ++ +GRG Y V +IN NEKV +K + V + +I L LR
Sbjct: 37 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--------G 88
Query: 88 HDNVIALKDVMM-PTHRISFKDVYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
N+I L D++ P R LV+E + +TD Q+ Q+L++ +++++++L+
Sbjct: 89 GPNIITLADIVKDPVSRTPA----LVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKA 141
Query: 146 LKYLHSANILHRDLKPGNLLVN-ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
L Y HS I+HRD+KP N++++ + L++ D+GLA +++ V +R+++ PEL
Sbjct: 142 LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVR-VASRYFKGPEL 200
Query: 205 LLCCDNYGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGTQQ--------- 254
L+ Y S+D+WS+GC+ A ++ RK P F G + +QL I V GT+
Sbjct: 201 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 260
Query: 255 -EADLEFID--NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E D F D +R+ + +S H+ S P ALD L K+L ++ R+T
Sbjct: 261 IELDPRFNDILGRHSRKRWERFVHSENQHLVS------PEALDFLDKLLRYDHQSRLTAR 314
Query: 312 EALQHPYI 319
EA++HPY
Sbjct: 315 EAMEHPYF 322
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/307 (31%), Positives = 161/307 (52%), Gaps = 40/307 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA----LRTLRELVLLRHIK 87
Y ++ +GRG Y V +IN NE+V +K + V + +I L LR
Sbjct: 45 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRGGT------ 98
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMD-TDLHQIIKSSQSLSNDHCKYFVFQLLRGL 146
N+I L D + +S K LV+E ++ TD Q+ Q L++ ++++++LL+ L
Sbjct: 99 --NIIKLIDTVKDP--VS-KTPALVFEYINNTDFKQLY---QILTDFDIRFYMYELLKAL 150
Query: 147 KYLHSANILHRDLKPGNLLVN-ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL 205
Y HS I+HRD+KP N++++ L++ D+GLA +++ V +R+++ PELL
Sbjct: 151 DYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVR-VASRYFKGPELL 209
Query: 206 LCCDNYGTSIDVWSVGCIFAE-ILGRKPIFPGTECLNQLKLIISVFGTQQ---------- 254
+ Y S+D+WS+GC+ A I R+P F G + +QL I V GT++
Sbjct: 210 VDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHI 269
Query: 255 EADLEFID--NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ D F D +R+ ++ +S H+ S P ALDLL K+L ++ +R+T E
Sbjct: 270 DLDPHFNDILGQHSRKRWENFIHSENRHLVS------PEALDLLDKLLRYDHQQRLTAKE 323
Query: 313 ALQHPYI 319
A++HPY
Sbjct: 324 AMEHPYF 330
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 153/303 (50%), Gaps = 30/303 (9%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y ++ +GRG Y V IN NEK IK + V + +L + N+
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK----KKIKREIKILQNLMGGPNI 88
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
+ L D++ H K L++E ++ +++ + L++ +Y++++LL+ L Y HS
Sbjct: 89 VKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHS 143
Query: 152 ANILHRDLKPGNLLVNANC-DLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRD+KP N++++ L++ D+GLA +++ V +R+++ PELL+ +
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQD 202
Query: 211 YGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGT------------QQEAD 257
Y S+D+WS+GC+FA ++ RK P F G + +QL I V GT + +
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 258 LEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHP 317
LE + +R+ + H+ S P A+D L K+L ++ +R+T EA+ HP
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRYDHQERLTALEAMTHP 316
Query: 318 YIS 320
Y
Sbjct: 317 YFQ 319
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 152/303 (50%), Gaps = 30/303 (9%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y ++ +GRG Y V IN NEK IK + V + +L N+
Sbjct: 54 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK----KKIKREIKILQNLXGGPNI 109
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
+ L D++ H K L++E ++ +++ + L++ +Y++++LL+ L Y HS
Sbjct: 110 VKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHS 164
Query: 152 ANILHRDLKPGNLLVNANC-DLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRD+KP N++++ L++ D+GLA +++ V +R+++ PELL+ +
Sbjct: 165 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQD 223
Query: 211 YGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGT------------QQEAD 257
Y S+D+WS+GC+FA ++ RK P F G + +QL I V GT + +
Sbjct: 224 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDPQ 283
Query: 258 LEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHP 317
LE + +R+ + H+ S P A+D L K+L ++ +R+T EA+ HP
Sbjct: 284 LEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRYDHQERLTALEAMTHP 337
Query: 318 YIS 320
Y
Sbjct: 338 YFQ 340
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 152/303 (50%), Gaps = 30/303 (9%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y ++ +GRG Y V IN NEK IK + V + +L N+
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK----KKIKREIKILQNLXGGPNI 88
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
+ L D++ H K L++E ++ +++ + L++ +Y++++LL+ L Y HS
Sbjct: 89 VKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHS 143
Query: 152 ANILHRDLKPGNLLVNANC-DLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRD+KP N++++ L++ D+GLA +++ V +R+++ PELL+ +
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQD 202
Query: 211 YGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGT------------QQEAD 257
Y S+D+WS+GC+FA ++ RK P F G + +QL I V GT + +
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 258 LEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHP 317
LE + +R+ + H+ S P A+D L K+L ++ +R+T EA+ HP
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRYDHQERLTALEAMTHP 316
Query: 318 YIS 320
Y
Sbjct: 317 YFQ 319
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 152/303 (50%), Gaps = 30/303 (9%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y ++ +GRG Y V IN NEK IK + V + +L N+
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK----KKIKREIKILQNLXGGPNI 88
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
+ L D++ H K L++E ++ +++ + L++ +Y++++LL+ L Y HS
Sbjct: 89 VKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHS 143
Query: 152 ANILHRDLKPGNLLVNANC-DLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRD+KP N++++ L++ D+GLA +++ V +R+++ PELL+ +
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQD 202
Query: 211 YGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGT------------QQEAD 257
Y S+D+WS+GC+FA ++ RK P F G + +QL I V GT + +
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 258 LEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHP 317
LE + +R+ + H+ S P A+D L K+L ++ +R+T EA+ HP
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRYDHQERLTALEAMTHP 316
Query: 318 YIS 320
Y
Sbjct: 317 YFQ 319
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 152/303 (50%), Gaps = 30/303 (9%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y ++ +GRG Y V IN NEK IK + V + +L N+
Sbjct: 34 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK----KKIKREIKILQNLXGGPNI 89
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
+ L D++ H K L++E ++ +++ + L++ +Y++++LL+ L Y HS
Sbjct: 90 VKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHS 144
Query: 152 ANILHRDLKPGNLLVNANC-DLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRD+KP N++++ L++ D+GLA +++ V +R+++ PELL+ +
Sbjct: 145 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQD 203
Query: 211 YGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGT------------QQEAD 257
Y S+D+WS+GC+FA ++ RK P F G + +QL I V GT + +
Sbjct: 204 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 263
Query: 258 LEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHP 317
LE + +R+ + H+ S P A+D L K+L ++ +R+T EA+ HP
Sbjct: 264 LEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRYDHQERLTALEAMTHP 317
Query: 318 YIS 320
Y
Sbjct: 318 YFQ 320
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 152/303 (50%), Gaps = 30/303 (9%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y ++ +GRG Y V IN NEK IK + V + +L N+
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK----KKIKREIKILQNLXGGPNI 88
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
+ L D++ H K L++E ++ +++ + L++ +Y++++LL+ L Y HS
Sbjct: 89 VKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHS 143
Query: 152 ANILHRDLKPGNLLVNANC-DLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRD+KP N++++ L++ D+GLA +++ V +R+++ PELL+ +
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQD 202
Query: 211 YGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGT------------QQEAD 257
Y S+D+WS+GC+FA ++ RK P F G + +QL I V GT + +
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 258 LEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHP 317
LE + +R+ + H+ S P A+D L K+L ++ +R+T EA+ HP
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRYDHQERLTALEAMTHP 316
Query: 318 YIS 320
Y
Sbjct: 317 YFQ 319
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 152/303 (50%), Gaps = 30/303 (9%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y ++ +GRG Y V IN NEK IK + V + +L N+
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK----KKIKREIKILQNLCGGPNI 88
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
+ L D++ H K L++E ++ +++ + L++ +Y++++LL+ L Y HS
Sbjct: 89 VKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHS 143
Query: 152 ANILHRDLKPGNLLVNANC-DLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRD+KP N++++ L++ D+GLA +++ V +R+++ PELL+ +
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQD 202
Query: 211 YGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGT------------QQEAD 257
Y S+D+WS+GC+FA ++ RK P F G + +QL I V GT + +
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 258 LEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHP 317
LE + +R+ + H+ S P A+D L K+L ++ +R+T EA+ HP
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRYDHQERLTALEAMTHP 316
Query: 318 YIS 320
Y
Sbjct: 317 YFQ 319
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 152/303 (50%), Gaps = 30/303 (9%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y ++ +GRG Y V IN NEK IK + V + +L N+
Sbjct: 34 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK----KKIKREIKILQNLCGGPNI 89
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
+ L D++ H K L++E ++ +++ + L++ +Y++++LL+ L Y HS
Sbjct: 90 VKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHS 144
Query: 152 ANILHRDLKPGNLLVNANC-DLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRD+KP N++++ L++ D+GLA +++ V +R+++ PELL+ +
Sbjct: 145 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQD 203
Query: 211 YGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGT------------QQEAD 257
Y S+D+WS+GC+FA ++ RK P F G + +QL I V GT + +
Sbjct: 204 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 263
Query: 258 LEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHP 317
LE + +R+ + H+ S P A+D L K+L ++ +R+T EA+ HP
Sbjct: 264 LEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRYDHQERLTALEAMTHP 317
Query: 318 YIS 320
Y
Sbjct: 318 YFQ 320
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 152/303 (50%), Gaps = 30/303 (9%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y ++ +GRG Y V IN NEK IK + V + +L N+
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK----KKIKREIKILQNLCGGPNI 88
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
+ L D++ H K L++E ++ +++ + L++ +Y++++LL+ L Y HS
Sbjct: 89 VKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHS 143
Query: 152 ANILHRDLKPGNLLVNANC-DLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRD+KP N++++ L++ D+GLA +++ V +R+++ PELL+ +
Sbjct: 144 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQD 202
Query: 211 YGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGT------------QQEAD 257
Y S+D+WS+GC+FA ++ RK P F G + +QL I V GT + +
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 262
Query: 258 LEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHP 317
LE + +R+ + H+ S P A+D L K+L ++ +R+T EA+ HP
Sbjct: 263 LEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRYDHQERLTALEAMTHP 316
Query: 318 YIS 320
Y
Sbjct: 317 YFQ 319
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 152/303 (50%), Gaps = 30/303 (9%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y ++ +GRG Y V IN NEK IK + V + +L N+
Sbjct: 35 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKK----KKIKREIKILQNLCGGPNI 90
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
+ L D++ H K L++E ++ +++ + L++ +Y++++LL+ L Y HS
Sbjct: 91 VKLLDIVRDQHS---KTPSLIFEYVNNTDFKVLYPT--LTDYDIRYYIYELLKALDYCHS 145
Query: 152 ANILHRDLKPGNLLVNANC-DLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRD+KP N++++ L++ D+GLA +++ V +R+++ PELL+ +
Sbjct: 146 QGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVR-VASRYFKGPELLVDLQD 204
Query: 211 YGTSIDVWSVGCIFAEILGRK-PIFPGTECLNQLKLIISVFGT------------QQEAD 257
Y S+D+WS+GC+FA ++ RK P F G + +QL I V GT + +
Sbjct: 205 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQ 264
Query: 258 LEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHP 317
LE + +R+ + H+ S P A+D L K+L ++ +R+T EA+ HP
Sbjct: 265 LEALVGRHSRKPWLKFMNADNQHLVS------PEAIDFLDKLLRYDHQERLTALEAMTHP 318
Query: 318 YIS 320
Y
Sbjct: 319 YFQ 321
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 145/301 (48%), Gaps = 45/301 (14%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN------NVFENRIDALRTLRELVLLR 84
+Y+ K +G GA G V + R+T +KVAIK I+ AL E+ +L+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLL 143
+ H +I +K+ +D Y+V ELM+ +L + ++ L CK + +Q+L
Sbjct: 71 KLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLH I+HRDLKP N+L+++ +C +KI DFG ++ G M T Y
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGETSLMRTLCGTPTYL 183
Query: 201 APELLLCCD--NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
APE+L+ Y ++D WS+G I L P P +E Q+ L
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSL------------- 228
Query: 259 EFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPY 318
+ I S Y+ I ++ + ALDL++K+LV +P R T EAL+HP+
Sbjct: 229 --------KDQITSGKYN---FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 277
Query: 319 I 319
+
Sbjct: 278 L 278
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 145/301 (48%), Gaps = 45/301 (14%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN------NVFENRIDALRTLRELVLLR 84
+Y+ K +G GA G V + R+T +KVAIK I+ AL E+ +L+
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 69
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLL 143
+ H +I +K+ +D Y+V ELM+ +L + ++ L CK + +Q+L
Sbjct: 70 KLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 123
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLH I+HRDLKP N+L+++ +C +KI DFG ++ G M T Y
Sbjct: 124 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGETSLMRTLCGTPTYL 182
Query: 201 APELLLCCD--NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
APE+L+ Y ++D WS+G I L P P +E Q+ L
Sbjct: 183 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSL------------- 227
Query: 259 EFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPY 318
+ I S Y+ I ++ + ALDL++K+LV +P R T EAL+HP+
Sbjct: 228 --------KDQITSGKYN---FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 276
Query: 319 I 319
+
Sbjct: 277 L 277
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 145/301 (48%), Gaps = 45/301 (14%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN------NVFENRIDALRTLRELVLLR 84
+Y+ K +G GA G V + R+T +KVAIK I+ AL E+ +L+
Sbjct: 17 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 76
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLL 143
+ H +I +K+ +D Y+V ELM+ +L + ++ L CK + +Q+L
Sbjct: 77 KLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 130
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLH I+HRDLKP N+L+++ +C +KI DFG ++ G M T Y
Sbjct: 131 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGETSLMRTLCGTPTYL 189
Query: 201 APELLLCCD--NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
APE+L+ Y ++D WS+G I L P P +E Q+ L
Sbjct: 190 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSL------------- 234
Query: 259 EFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPY 318
+ I S Y+ I ++ + ALDL++K+LV +P R T EAL+HP+
Sbjct: 235 --------KDQITSGKYN---FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 283
Query: 319 I 319
+
Sbjct: 284 L 284
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 145/301 (48%), Gaps = 45/301 (14%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN------NVFENRIDALRTLRELVLLR 84
+Y+ K +G GA G V + R+T +KVAIK I+ AL E+ +L+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLL 143
+ H +I +K+ +D Y+V ELM+ +L + ++ L CK + +Q+L
Sbjct: 71 KLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLH I+HRDLKP N+L+++ +C +KI DFG ++ G M T Y
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGETSLMRTLCGTPTYL 183
Query: 201 APELLLCCD--NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
APE+L+ Y ++D WS+G I L P P +E Q+ L
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSL------------- 228
Query: 259 EFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPY 318
+ I S Y+ I ++ + ALDL++K+LV +P R T EAL+HP+
Sbjct: 229 --------KDQITSGKYN---FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 277
Query: 319 I 319
+
Sbjct: 278 L 278
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 145/301 (48%), Gaps = 45/301 (14%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN------NVFENRIDALRTLRELVLLR 84
+Y+ K +G GA G V + R+T +KVAIK I+ AL E+ +L+
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLL 143
+ H +I +K+ +D Y+V ELM+ +L + ++ L CK + +Q+L
Sbjct: 71 KLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLH I+HRDLKP N+L+++ +C +KI DFG ++ G M T Y
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGETSLMRTLCGTPTYL 183
Query: 201 APELLLCCD--NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
APE+L+ Y ++D WS+G I L P P +E Q+ L
Sbjct: 184 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSL------------- 228
Query: 259 EFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPY 318
+ I S Y+ I ++ + ALDL++K+LV +P R T EAL+HP+
Sbjct: 229 --------KDQITSGKYN---FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 277
Query: 319 I 319
+
Sbjct: 278 L 278
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 145/301 (48%), Gaps = 45/301 (14%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN------NVFENRIDALRTLRELVLLR 84
+Y+ K +G GA G V + R+T +KVAI+ I+ AL E+ +L+
Sbjct: 136 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK 195
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLL 143
+ H +I +K+ +D Y+V ELM+ +L + ++ L CK + +Q+L
Sbjct: 196 KLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 249
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLH I+HRDLKP N+L+++ +C +KI DFG ++ G M T Y
Sbjct: 250 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGETSLMRTLCGTPTYL 308
Query: 201 APELLLCCD--NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
APE+L+ Y ++D WS+G I L P P +E Q+ L
Sbjct: 309 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSL------------- 353
Query: 259 EFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPY 318
+ I S Y+ I ++ + ALDL++K+LV +P R T EAL+HP+
Sbjct: 354 --------KDQITSGKYN---FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 402
Query: 319 I 319
+
Sbjct: 403 L 403
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 145/301 (48%), Gaps = 45/301 (14%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN------NVFENRIDALRTLRELVLLR 84
+Y+ K +G GA G V + R+T +KVAI+ I+ AL E+ +L+
Sbjct: 150 EYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILK 209
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLL 143
+ H +I +K+ +D Y+V ELM+ +L + ++ L CK + +Q+L
Sbjct: 210 KLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 263
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLH I+HRDLKP N+L+++ +C +KI DFG ++ G M T Y
Sbjct: 264 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI-LGETSLMRTLCGTPTYL 322
Query: 201 APELLLCCD--NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
APE+L+ Y ++D WS+G I L P P +E Q+ L
Sbjct: 323 APEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP--PFSEHRTQVSL------------- 367
Query: 259 EFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPY 318
+ I S Y+ I ++ + ALDL++K+LV +P R T EAL+HP+
Sbjct: 368 --------KDQITSGKYN---FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPW 416
Query: 319 I 319
+
Sbjct: 417 L 417
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 143/311 (45%), Gaps = 46/311 (14%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFE----NRIDALR-- 75
W E KY P IGRG VV ++R T + A+K + E +++ +R
Sbjct: 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREA 145
Query: 76 TLRELVLLRHIK-HDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSND 133
T RE +LR + H ++I L D + SF ++LV++LM +L + +LS
Sbjct: 146 TRRETHILRQVAGHPHIITLIDSYESS---SF--MFLVFDLMRKGELFDYLTEKVALSEK 200
Query: 134 HCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY 193
+ + LL + +LH+ NI+HRDLKP N+L++ N +++ DFG + E+ + E
Sbjct: 201 ETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK-LREL 259
Query: 194 VVTRWYRAPELLLCC-----DNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
T Y APE+L C YG +D+W+ G I +L P F + L++I+
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIME 319
Query: 249 VFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRI 308
G Q + E+ D + DL+ ++L +P R+
Sbjct: 320 --GQYQFSSPEWDDRSSTVK-------------------------DLISRLLQVDPEARL 352
Query: 309 TVTEALQHPYI 319
T +ALQHP+
Sbjct: 353 TAEQALQHPFF 363
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 141/306 (46%), Gaps = 37/306 (12%)
Query: 18 YYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTL 77
Y+ T Y + +G+GA+ VV + + ++ A K IN + D +
Sbjct: 19 YFQXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLE 78
Query: 78 RELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCK 136
RE + R +KH N++ L D + F YLV++L+ +L + I + + S
Sbjct: 79 REARICRLLKHPNIVRLHDSISEE---GFH--YLVFDLVTGGELFEDIVAREYYSEADAS 133
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCD---LKICDFGLARTSRGNEQFMTEY 193
+ + Q+L + ++H +I+HRDLKP NLL+ + C +K+ DFGLA +G +Q +
Sbjct: 134 HCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGF 193
Query: 194 VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQ 253
T Y +PE+L D YG +D+W+ G I +L P F
Sbjct: 194 AGTPGYLSPEVLR-KDPYGKPVDIWACGVILYILLVGYPPFWDE---------------- 236
Query: 254 QEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEA 313
D K + IK+ Y S + P A +L+ +ML P+KRIT +A
Sbjct: 237 --------DQHKLYQQIKAGAYD---FPSPEWDTVTPEAKNLINQMLTINPAKRITADQA 285
Query: 314 LQHPYI 319
L+HP++
Sbjct: 286 LKHPWV 291
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 138/297 (46%), Gaps = 49/297 (16%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y +K +G GAYG V ++ T+ + AIK I + + L E+ +L+ + H N+
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 92 IALKDVMMPTHRISFKDVYLVYE------LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
+ L D ++ YLV E L D +H++ + + Q+L G
Sbjct: 99 MKLYDFFEDK-----RNYYLVMECYKGGELFDEIIHRM-----KFNEVDAAVIIKQVLSG 148
Query: 146 LKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
+ YLH NI+HRDLKP NLL+ + + +KI DFGL+ N++ M E + T +Y AP
Sbjct: 149 VTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKKMKERLGTAYYIAP 207
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E+L Y DVWS+G I +L P F G T QE
Sbjct: 208 EVLR--KKYDEKCDVWSIGVILFILLAGYPPFGGQ--------------TDQE------- 244
Query: 263 NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
++ + + T S + A DL+++ML F+ +RI+ +AL+HP+I
Sbjct: 245 ------ILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWI 295
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 164/350 (46%), Gaps = 59/350 (16%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINN--VFENRIDALRTLRE 79
W +EID+ IG+G++G V + +R E VAIK I N F N+ L E
Sbjct: 33 WMDRYEIDS------LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 86
Query: 80 LVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSS--QSLSNDHCKY 137
L+ KHD + V + H + + LV+E++ +L+ +++++ + +S + +
Sbjct: 87 LM----NKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRK 142
Query: 138 FVFQLLRGLKYLHSA--NILHRDLKPGNLLV--NANCDLKICDFGLARTSRGNEQFMTEY 193
F Q+ L +L + +I+H DLKP N+L+ +KI DFG +S Q + +
Sbjct: 143 FAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQX 199
Query: 194 VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQ 253
+ +R+YR+PE+LL Y +ID+WS+GCI E+ +P+F G ++Q+ I+ V G
Sbjct: 200 IQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 258
Query: 254 QEADLEFIDNPKARRFIKSL-------------------PYSRGTH-------------- 280
L+ PKAR+F + L P +R H
Sbjct: 259 PAHILD--QAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRR 316
Query: 281 -ISSLYPQADPLAL-DLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCN 328
S + AD L DL+ +ML ++P RI ALQH + D N
Sbjct: 317 AGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTADEGTN 366
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 145/293 (49%), Gaps = 44/293 (15%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA-LRTLRELVLLRHIKHDN 90
Y+ + +G G++G V + + +T +KVA+K I+ + D +R RE+ L+ ++H +
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 91 VIALKDVMM-PTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
+I L DV+ PT D+ +V E +L I + ++ D + F Q++ ++Y
Sbjct: 71 IIKLYDVITTPT------DIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYC 124
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEYVVTRWYRAPELLLCC 208
H I+HRDLKP NLL++ N ++KI DFGL+ + GN F+ + Y APE++
Sbjct: 125 HRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN--FLKTSCGSPNYAAPEVINGK 182
Query: 209 DNYGTSIDVWSVGCI-FAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKAR 267
G +DVWS G + + ++GR P D EFI P
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPF-----------------------DDEFI--PNLF 217
Query: 268 RFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS 320
+ + S Y +S P A L+++M+V +P +RIT+ E + P+ +
Sbjct: 218 KKVNSCVYVMPDFLS-------PGAQSLIRRMIVADPMQRITIQEIRRDPWFN 263
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 163/346 (47%), Gaps = 59/346 (17%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINN--VFENRIDALRTLRE 79
W +EID+ IG+G++G V + +R E VAIK I N F N+ L E
Sbjct: 52 WMDRYEIDS------LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 105
Query: 80 LVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSS--QSLSNDHCKY 137
L+ KHD + V + H + + LV+E++ +L+ +++++ + +S + +
Sbjct: 106 LM----NKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRK 161
Query: 138 FVFQLLRGLKYLHSA--NILHRDLKPGNLLV--NANCDLKICDFGLARTSRGNEQFMTEY 193
F Q+ L +L + +I+H DLKP N+L+ +KI DFG +S Q + +
Sbjct: 162 FAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG---SSCQLGQRIYQX 218
Query: 194 VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQ 253
+ +R+YR+PE+LL Y +ID+WS+GCI E+ +P+F G ++Q+ I+ V G
Sbjct: 219 IQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277
Query: 254 QEADLEFIDNPKARRFIKSL-------------------PYSRGTH-------------- 280
L+ PKAR+F + L P +R H
Sbjct: 278 PAHILD--QAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRR 335
Query: 281 -ISSLYPQADPLAL-DLLQKMLVFEPSKRITVTEALQHPYISGLYD 324
S + AD L DL+ +ML ++P RI ALQH + D
Sbjct: 336 AGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 142/302 (47%), Gaps = 47/302 (15%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN-----NVFENRIDALR--TLRELVLLR 84
Y P + +GRG VV I++ T ++ A+K I+ + + LR TL+E+ +LR
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 85 HIK-HDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQL 142
+ H N+I LKD T+ F LV++LM +L + +LS + + L
Sbjct: 79 KVSGHPNIIQLKDTY-ETNTFFF----LVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 133
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L + LH NI+HRDLKP N+L++ + ++K+ DFG + E+ + E T Y AP
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK-LREVCGTPSYLAP 192
Query: 203 ELLLCCDN-----YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEAD 257
E++ C N YG +D+WS G I +L P F + + L++I+S G Q
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS--GNYQFGS 250
Query: 258 LEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHP 317
E+ D + DL+ + LV +P KR T EAL HP
Sbjct: 251 PEWDDYSDTVK-------------------------DLVSRFLVVQPQKRYTAEEALAHP 285
Query: 318 YI 319
+
Sbjct: 286 FF 287
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 142/302 (47%), Gaps = 47/302 (15%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN-----NVFENRIDALR--TLRELVLLR 84
Y P + +GRG VV I++ T ++ A+K I+ + + LR TL+E+ +LR
Sbjct: 6 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 85 HIK-HDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQL 142
+ H N+I LKD T+ F LV++LM +L + +LS + + L
Sbjct: 66 KVSGHPNIIQLKDTY-ETNTFFF----LVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 120
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L + LH NI+HRDLKP N+L++ + ++K+ DFG + E+ + E T Y AP
Sbjct: 121 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK-LREVCGTPSYLAP 179
Query: 203 ELLLCCDN-----YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEAD 257
E++ C N YG +D+WS G I +L P F + + L++I+S G Q
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS--GNYQFGS 237
Query: 258 LEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHP 317
E+ D + DL+ + LV +P KR T EAL HP
Sbjct: 238 PEWDDYSDTVK-------------------------DLVSRFLVVQPQKRYTAEEALAHP 272
Query: 318 YI 319
+
Sbjct: 273 FF 274
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 101/349 (28%), Positives = 165/349 (47%), Gaps = 65/349 (18%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINN--VFENRIDALRTLRE 79
W +EID+ IG+G++G V + +R E VAIK I N F N+ L E
Sbjct: 52 WMDRYEIDS------LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE 105
Query: 80 LVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSS--QSLSNDHCKY 137
L+ KHD + V + H + + LV+E++ +L+ +++++ + +S + +
Sbjct: 106 LM----NKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRK 161
Query: 138 FVFQLLRGLKYLHSA--NILHRDLKPGNLLVNANCD-----LKICDFGLARTSRGNEQFM 190
F Q+ L +L + +I+H DLKP N+L+ C+ +KI DFG +S Q +
Sbjct: 162 FAQQMCTALLFLATPELSIIHCDLKPENILL---CNPKRXAIKIVDFG---SSCQLGQRI 215
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVF 250
+ + +R+YR+PE+LL Y +ID+WS+GCI E+ +P+F G ++Q+ I+ V
Sbjct: 216 YQXIQSRFYRSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVL 274
Query: 251 GTQQEADLEFIDNPKARRFIKSL-------------------PYSRGTH----------- 280
G L+ PKAR+F + L P +R H
Sbjct: 275 GIPPAHILD--QAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPG 332
Query: 281 ----ISSLYPQADPLAL-DLLQKMLVFEPSKRITVTEALQHPYISGLYD 324
S + AD L DL+ +ML ++P RI ALQH + D
Sbjct: 333 GRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTAD 381
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 135/293 (46%), Gaps = 36/293 (12%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
IG G+ G+VC + + T ++VA+KK++ + R + L E+V++R HDNV+
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELL--FNEVVIMRDYHHDNVVD---- 106
Query: 98 MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHR 157
M + + ++++V E ++ I + ++ + +LR L YLH+ ++HR
Sbjct: 107 -MYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHR 165
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDV 217
D+K ++L+ ++ +K+ DFG V T ++ APE++ YGT +D+
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLP-YGTEVDI 224
Query: 218 WSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSR 277
WS+G + E++ +P + L + RR SLP
Sbjct: 225 WSLGIMVIEMIDGEPPYFNEPPLQAM-----------------------RRIRDSLP--- 258
Query: 278 GTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPP 330
+ L+ + L L MLV EPS+R T E L HP++ P C P
Sbjct: 259 -PRVKDLHKVSSVLR-GFLDLMLVREPSQRATAQELLGHPFLKLAGPPSCIVP 309
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 138/293 (47%), Gaps = 37/293 (12%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
+Y + +G+GA+ VV + T ++ A K IN + D + RE + R +KH N
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 64
Query: 91 VIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
++ L D + F YLV++L+ +L + I + + S + + Q+L + +
Sbjct: 65 IVRLHDSISEE---GFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 150 HSANILHRDLKPGNLLV---NANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
H I+HRDLKP NLL+ + +K+ DFGLA +G++Q + T Y +PE+L
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 207 CCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKA 266
D YG +D+W+ G I +L P F D +
Sbjct: 180 -KDPYGKPVDMWACGVILYILLVGYPPFWDE------------------------DQHRL 214
Query: 267 RRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+ IK+ Y S + P A DL+ KML P+KRIT +EAL+HP+I
Sbjct: 215 YQQIKAGAYD---FPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 139/295 (47%), Gaps = 41/295 (13%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
+Y + +G+GA+ VV + T ++ A K IN + D + RE + R +KH N
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 64
Query: 91 VIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
++ L D + F YLV++L+ +L + I + + S + + Q+L + +
Sbjct: 65 IVRLHDSISEE---GFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 150 HSANILHRDLKPGNLLV---NANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
H I+HRDLKP NLL+ + +K+ DFGLA +G++Q + T Y +PE+L
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 207 CCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKA 266
D YG +D+W+ G I +L P F D +
Sbjct: 180 -KDPYGKPVDMWACGVILYILLVGYP--------------------------PFWDEDQH 212
Query: 267 RRF--IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
R + IK+ Y S + P A DL+ KML P+KRIT +EAL+HP+I
Sbjct: 213 RLYQQIKAGAYD---FPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 137/293 (46%), Gaps = 37/293 (12%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
+Y + IG+GA+ VV + T + A K IN + D + RE + R +KH N
Sbjct: 5 EYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSN 64
Query: 91 VIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
++ L D + F YLV++L+ +L + I + + S + + Q+L + +
Sbjct: 65 IVRLHDSISEE---GFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 119
Query: 150 HSANILHRDLKPGNLLVNANCD---LKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
H ++HRDLKP NLL+ + C +K+ DFGLA +G++Q + T Y +PE+L
Sbjct: 120 HQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 207 CCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKA 266
+ YG +D+W+ G I +L P F D K
Sbjct: 180 -KEAYGKPVDIWACGVILYILLVGYPPFWDE------------------------DQHKL 214
Query: 267 RRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+ IK+ Y S + P A +L+ +ML P+KRIT EAL+HP++
Sbjct: 215 YQQIKAGAYD---FPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWV 264
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 141/302 (46%), Gaps = 49/302 (16%)
Query: 25 LFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
FE++++ +GRGA +V + T + A+K + + +I +RT E+ +L
Sbjct: 54 FFEVESE------LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI--VRT--EIGVLL 103
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLL 143
+ H N+I LK++ IS LV EL+ +L I S V Q+L
Sbjct: 104 RLSHPNIIKLKEIFETPTEIS-----LVLELVTGGELFDRIVEKGYYSERDAADAVKQIL 158
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
+ YLH I+HRDLKP NLL + LKI DFGL++ ++ M T Y
Sbjct: 159 EAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE-HQVLMKTVCGTPGYC 217
Query: 201 APELLLCCDNYGTSIDVWSVGCI-FAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLE 259
APE+L C YG +D+WSVG I + + G +P + E
Sbjct: 218 APEILRGC-AYGPEVDMWSVGIITYILLCGFEPFYD-----------------------E 253
Query: 260 FIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
D RR + Y IS + + A DL++K++V +P KR+T +ALQHP++
Sbjct: 254 RGDQFMFRRILNCEYY----FISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWV 309
Query: 320 SG 321
+G
Sbjct: 310 TG 311
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 149/334 (44%), Gaps = 49/334 (14%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEK-VAIKKINNVFENRIDALRTLRELVLLRHI 86
+ +Y + +G GA+G V I+ + + VA+K + NV + +A R+ E+ +L H+
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARS--EIQVLEHL 68
Query: 87 KH-DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN--DHCKYFVFQLL 143
D + V M + +V+EL+ + IK + L DH + +Q+
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA-------------------NCDLKICDFGLARTSR 184
+ + +LHS + H DLKP N+L N D+K+ DFG A
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY-- 186
Query: 185 GNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLK 244
+++ + V TR YRAPE++L + DVWS+GCI E +FP + L
Sbjct: 187 -DDEHHSTLVSTRHYRAPEVILAL-GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA 244
Query: 245 LIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISS---LYPQADPLA--------- 292
++ + G + I + R++ H S+ + PL
Sbjct: 245 MMERILGPLPK---HMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVE 301
Query: 293 ----LDLLQKMLVFEPSKRITVTEALQHPYISGL 322
DL+QKML ++P+KRIT+ EAL+HP+ L
Sbjct: 302 HERLFDLIQKMLEYDPAKRITLREALKHPFFDLL 335
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 134/294 (45%), Gaps = 39/294 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y + +G+GA+ VV + ++ A K IN + D + RE + R +KH N+
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 92 IALKD-VMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
+ L D + H YL+++L+ +L + I + + S + + Q+L + +
Sbjct: 84 VRLHDSISEEGHH------YLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 137
Query: 150 HSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
H ++HRDLKP NLL+ + +K+ DFGLA G +Q + T Y +PE+L
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 197
Query: 207 CCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKA 266
D YG +D+W+ G I +L P F D +
Sbjct: 198 -KDPYGKPVDLWACGVILYILLVGYPPFWDE------------------------DQHRL 232
Query: 267 RRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS 320
+ IK+ Y S + P A DL+ KML PSKRIT EAL+HP+IS
Sbjct: 233 YQQIKAGAYD---FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 283
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 141/302 (46%), Gaps = 47/302 (15%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN-----NVFENRIDALR--TLRELVLLR 84
Y P + +GRG VV I++ T ++ A+K I+ + + LR TL+E+ +LR
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 85 HIK-HDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQL 142
+ H N+I LKD T+ F LV++LM +L + +LS + + L
Sbjct: 79 KVSGHPNIIQLKDTY-ETNTFFF----LVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 133
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L + LH NI+HRDLKP N+L++ + ++K+ DFG + E+ + T Y AP
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS-VCGTPSYLAP 192
Query: 203 ELLLCCDN-----YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEAD 257
E++ C N YG +D+WS G I +L P F + + L++I+S G Q
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS--GNYQFGS 250
Query: 258 LEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHP 317
E+ D + DL+ + LV +P KR T EAL HP
Sbjct: 251 PEWDDYSDTVK-------------------------DLVSRFLVVQPQKRYTAEEALAHP 285
Query: 318 YI 319
+
Sbjct: 286 FF 287
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 140/310 (45%), Gaps = 60/310 (19%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKIN------------------------NVFENRIDA 73
IG+G+YGVV + N N A+K ++ + R
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 74 LRTLRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSND 133
+ +E+ +L+ + H NV+ L +V+ + +Y+V+EL++ + + + LS D
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNE---DHLYMVFELVNQGPVMEVPTLKPLSED 137
Query: 134 HCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY 193
+++ L++G++YLH I+HRD+KP NLLV + +KI DFG++ +G++ ++
Sbjct: 138 QARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT 197
Query: 194 VVTRWYRAPELLLCCDNY--GTSIDVWSVGC-IFAEILGRKPIFPGTECLNQLKLIISVF 250
V T + APE L G ++DVW++G ++ + G+ P + I+ +
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD--------ERIMCLH 249
Query: 251 GTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITV 310
+ LEF D P +K DL+ +ML P RI V
Sbjct: 250 SKIKSQALEFPDQPDIAEDLK----------------------DLITRMLDKNPESRIVV 287
Query: 311 TEALQHPYIS 320
E HP+++
Sbjct: 288 PEIKLHPWVT 297
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 148/334 (44%), Gaps = 49/334 (14%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEK-VAIKKINNVFENRIDALRTLRELVLLRHI 86
+ +Y + +G GA+G V I+ + + VA+K + NV + +A R+ E+ +L H+
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARS--EIQVLEHL 68
Query: 87 KH-DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN--DHCKYFVFQLL 143
D + V M + +V+EL+ + IK + L DH + +Q+
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA-------------------NCDLKICDFGLARTSR 184
+ + +LHS + H DLKP N+L N D+K+ DFG A
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY-- 186
Query: 185 GNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLK 244
+++ + V R YRAPE++L + DVWS+GCI E +FP + L
Sbjct: 187 -DDEHHSTLVXXRHYRAPEVILAL-GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLA 244
Query: 245 LIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISS---LYPQADPLA--------- 292
++ + G + I + R++ H S+ + PL
Sbjct: 245 MMERILGPLPK---HMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVE 301
Query: 293 ----LDLLQKMLVFEPSKRITVTEALQHPYISGL 322
DL+QKML ++P+KRIT+ EAL+HP+ L
Sbjct: 302 HERLFDLIQKMLEYDPAKRITLREALKHPFFDLL 335
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 134/298 (44%), Gaps = 42/298 (14%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN-NVFENRIDALRTLRELVLLRHI 86
+ +Y +K +G GAYG V ++ T + AIK I + ++ L E+ +L+ +
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
H N++ L + ++ YLV E+ +L I Q S + Q+L G
Sbjct: 79 DHPNIMKLYEFFEDK-----RNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSG 133
Query: 146 LKYLHSANILHRDLKPGNLLVNANCD---LKICDFGL-ARTSRGNEQFMTEYVVTRWYRA 201
YLH NI+HRDLKP NLL+ + +KI DFGL A G + M E + T +Y A
Sbjct: 134 TTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MKERLGTAYYIA 191
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE+L Y DVWS G I +L P F G + D E +
Sbjct: 192 PEVLR--KKYDEKCDVWSCGVILYILLCGYPPFGG------------------QTDQEIL 231
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+ +F P + Q A L++ ML +EPSKRI+ EAL HP+I
Sbjct: 232 KRVEKGKFSFDPPD---------WTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 135/298 (45%), Gaps = 42/298 (14%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN-NVFENRIDALRTLRELVLLRHI 86
+ +Y +K +G GAYG V ++ T + AIK I + ++ L E+ +L+ +
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
H N++ L + ++ YLV E+ +L I Q S + Q+L G
Sbjct: 62 DHPNIMKLYEFFEDK-----RNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSG 116
Query: 146 LKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGL-ARTSRGNEQFMTEYVVTRWYRA 201
YLH NI+HRDLKP NLL+ + + +KI DFGL A G + M E + T +Y A
Sbjct: 117 TTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MKERLGTAYYIA 174
Query: 202 PELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
PE+L Y DVWS G I +L P F G + D E +
Sbjct: 175 PEVLR--KKYDEKCDVWSCGVILYILLCGYPPFGG------------------QTDQEIL 214
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+ +F P + Q A L++ ML +EPSKRI+ EAL HP+I
Sbjct: 215 KRVEKGKFSFDPPD---------WTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 139/318 (43%), Gaps = 50/318 (15%)
Query: 10 GMKSRGKHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFEN 69
G+ RG H ++ YV + IG G+Y +++ TN + A+K I+ +
Sbjct: 13 GLVPRGSHMNLVF------SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRD 66
Query: 70 RIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQ 128
+ + +LLR+ +H N+I LKDV K VYLV ELM +L I +
Sbjct: 67 PSEEIE-----ILLRYGQHPNIITLKDVY-----DDGKHVYLVTELMRGGELLDKILRQK 116
Query: 129 SLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLV-----NANCDLKICDFGLARTS 183
S + + + + ++YLHS ++HRDLKP N+L N C L+ICDFG A+
Sbjct: 117 FFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPEC-LRICDFGFAKQL 175
Query: 184 RGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQ 242
R + T + APE+L Y D+WS+G + +L G P G
Sbjct: 176 RAENGLLMTPCYTANFVAPEVLK-RQGYDEGCDIWSLGILLYTMLAGYTPFANGPS---- 230
Query: 243 LKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVF 302
D P+ + + + T + A DL+ KML
Sbjct: 231 -------------------DTPE--EILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHV 269
Query: 303 EPSKRITVTEALQHPYIS 320
+P +R+T + LQHP+++
Sbjct: 270 DPHQRLTAKQVLQHPWVT 287
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 153/330 (46%), Gaps = 48/330 (14%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINN-VFENRIDALRTLRELVLLRHIKHD 89
+Y + +G+G++G V ++ T ++ A+K I+ + + D LRE+ LL+ + H
Sbjct: 51 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 110
Query: 90 NVIALKDVMMPTHRISFKD---VYLVYEL-MDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
N++ L + F+D YLV E+ +L I S + S + Q+L G
Sbjct: 111 NIMKLYEF--------FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 162
Query: 146 LKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
+ Y+H I+HRDLKP NLL+ + + +++I DFGL+ +++ M + + T +Y AP
Sbjct: 163 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKIGTAYYIAP 221
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E+L Y DVWS G I +L P F G + LK +
Sbjct: 222 EVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV---------------- 263
Query: 263 NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGL 322
+ ++ LP + + A DL++KML + PS RI+ +AL H +I
Sbjct: 264 --EKGKYTFELPQ---------WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 312
Query: 323 YDPQ--CNPPAQVPLSLDIDENIGEQMIRQ 350
Q + P+ L+I + G Q + Q
Sbjct: 313 TKEQISVDVPSLDNAILNIRQFQGTQKLAQ 342
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 153/330 (46%), Gaps = 48/330 (14%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINN-VFENRIDALRTLRELVLLRHIKHD 89
+Y + +G+G++G V ++ T ++ A+K I+ + + D LRE+ LL+ + H
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 90 NVIALKDVMMPTHRISFKD---VYLVYEL-MDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
N++ L + F+D YLV E+ +L I S + S + Q+L G
Sbjct: 87 NIMKLYEF--------FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 138
Query: 146 LKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
+ Y+H I+HRDLKP NLL+ + + +++I DFGL+ +++ M + + T +Y AP
Sbjct: 139 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKIGTAYYIAP 197
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E+L Y DVWS G I +L P F G + LK +
Sbjct: 198 EVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV---------------- 239
Query: 263 NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGL 322
+ ++ LP + + A DL++KML + PS RI+ +AL H +I
Sbjct: 240 --EKGKYTFELPQ---------WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 288
Query: 323 YDPQ--CNPPAQVPLSLDIDENIGEQMIRQ 350
Q + P+ L+I + G Q + Q
Sbjct: 289 TKEQISVDVPSLDNAILNIRQFQGTQKLAQ 318
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 153/330 (46%), Gaps = 48/330 (14%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINN-VFENRIDALRTLRELVLLRHIKHD 89
+Y + +G+G++G V ++ T ++ A+K I+ + + D LRE+ LL+ + H
Sbjct: 50 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 109
Query: 90 NVIALKDVMMPTHRISFKD---VYLVYEL-MDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
N++ L + F+D YLV E+ +L I S + S + Q+L G
Sbjct: 110 NIMKLYEF--------FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 161
Query: 146 LKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
+ Y+H I+HRDLKP NLL+ + + +++I DFGL+ +++ M + + T +Y AP
Sbjct: 162 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKIGTAYYIAP 220
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E+L Y DVWS G I +L P F G + LK +
Sbjct: 221 EVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV---------------- 262
Query: 263 NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGL 322
+ ++ LP + + A DL++KML + PS RI+ +AL H +I
Sbjct: 263 --EKGKYTFELPQ---------WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 311
Query: 323 YDPQ--CNPPAQVPLSLDIDENIGEQMIRQ 350
Q + P+ L+I + G Q + Q
Sbjct: 312 TKEQISVDVPSLDNAILNIRQFQGTQKLAQ 341
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 132/296 (44%), Gaps = 44/296 (14%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
YV + IG G+Y +++ TN + A+K I+ + + + +LLR+ +H N+
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIE-----ILLRYGQHPNI 83
Query: 92 IALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
I LKDV K VYLV ELM +L I + S + + + + ++YLH
Sbjct: 84 ITLKDVY-----DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 151 SANILHRDLKPGNLLV-----NANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL 205
S ++HRDLKP N+L N C L+ICDFG A+ R + T + APE+L
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPEC-LRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 197
Query: 206 LCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNP 264
Y D+WS+G + +L G P G D P
Sbjct: 198 K-RQGYDEGCDIWSLGILLYTMLAGYTPFANGPS-----------------------DTP 233
Query: 265 KARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS 320
+ + + + T + A DL+ KML +P +R+T + LQHP+++
Sbjct: 234 E--EILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVT 287
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 141/297 (47%), Gaps = 46/297 (15%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINN-VFENRIDALRTLRELVLLRHIKHD 89
+Y + +G+G++G V ++ T ++ A+K I+ + + D LRE+ LL+ + H
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 92
Query: 90 NVIALKDVMMPTHRISFKD---VYLVYEL-MDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
N++ L + F+D YLV E+ +L I S + S + Q+L G
Sbjct: 93 NIMKLYEF--------FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 144
Query: 146 LKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
+ Y+H I+HRDLKP NLL+ + + +++I DFGL+ +++ M + + T +Y AP
Sbjct: 145 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKIGTAYYIAP 203
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E+L Y DVWS G I +L P F G + LK +
Sbjct: 204 EVL--HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV---------------- 245
Query: 263 NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+ ++ LP + + A DL++KML + PS RI+ +AL H +I
Sbjct: 246 --EKGKYTFELPQ---------WKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI 291
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 150/327 (45%), Gaps = 52/327 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVA---IKKINNVFENR-IDALRTLRELVLLRHIKHDNV 91
+ +G G + +V + T + A IKK + R + RE+ +LR + H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
I L DV + DV L+ EL+ +L + +SLS + F+ Q+L G+ YLH
Sbjct: 78 ITLHDVYE-----NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 151 SANILHRDLKPGN-LLVNANC---DLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
+ I H DLKP N +L++ N +K+ DFGLA +F + T + APE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-GTPEFVAPEIV- 190
Query: 207 CCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN 263
NY G D+WS+G I +L F G L I +V + D EF
Sbjct: 191 ---NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV---SYDFDEEF--- 241
Query: 264 PKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLY 323
+ Q LA D ++K+LV E KR+T+ EAL+HP+I+ +
Sbjct: 242 ---------------------FSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD 280
Query: 324 DPQCNPPAQVPLSLDIDENIGEQMIRQ 350
+ Q + ++L EN +Q +R+
Sbjct: 281 NQQAMVRRESVVNL---ENFRKQYVRR 304
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 133/294 (45%), Gaps = 37/294 (12%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
+Y + +G+GA+ VV + ++ A IN + D + RE + R +KH N
Sbjct: 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPN 71
Query: 91 VIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
++ L D + YL+++L+ +L + I + + S + + Q+L + +
Sbjct: 72 IVRLHDSISEE-----GHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 126
Query: 150 HSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
H ++HR+LKP NLL+ + +K+ DFGLA G +Q + T Y +PE+L
Sbjct: 127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 186
Query: 207 CCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKA 266
D YG +D+W+ G I +L P F D +
Sbjct: 187 -KDPYGKPVDLWACGVILYILLVGYPPFWDE------------------------DQHRL 221
Query: 267 RRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS 320
+ IK+ Y S + P A DL+ KML PSKRIT EAL+HP+IS
Sbjct: 222 YQQIKAGAYD---FPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 272
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 150/327 (45%), Gaps = 52/327 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVA---IKKINNVFENR-IDALRTLRELVLLRHIKHDNV 91
+ +G G + +V + T + A IKK + R + RE+ +LR + H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
I L DV + DV L+ EL+ +L + +SLS + F+ Q+L G+ YLH
Sbjct: 78 ITLHDVYE-----NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 151 SANILHRDLKPGN-LLVNANC---DLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
+ I H DLKP N +L++ N +K+ DFGLA +F + T + APE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-GTPEFVAPEIV- 190
Query: 207 CCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN 263
NY G D+WS+G I +L F G L I +V + D EF
Sbjct: 191 ---NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV---SYDFDEEF--- 241
Query: 264 PKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLY 323
+ Q LA D ++K+LV E KR+T+ EAL+HP+I+ +
Sbjct: 242 ---------------------FSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD 280
Query: 324 DPQCNPPAQVPLSLDIDENIGEQMIRQ 350
+ Q + ++L EN +Q +R+
Sbjct: 281 NQQAMVRRESVVNL---ENFRKQYVRR 304
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 149/327 (45%), Gaps = 52/327 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVA---IKKINNVFENR-IDALRTLRELVLLRHIKHDNV 91
+ +G G + +V + T + A IKK + R + RE+ +LR + H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
I L DV + DV L+ EL+ +L + +SLS + F+ Q+L G+ YLH
Sbjct: 78 ITLHDVYE-----NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 151 SANILHRDLKPGN-LLVNANC---DLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
+ I H DLKP N +L++ N +K+ DFGLA +F + T + APE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-GTPEFVAPEIV- 190
Query: 207 CCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN 263
NY G D+WS+G I +L F G L I SV + D EF
Sbjct: 191 ---NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV---SYDFDEEF--- 241
Query: 264 PKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLY 323
+ LA D ++K+LV E KR+T+ EAL+HP+I+ +
Sbjct: 242 ---------------------FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD 280
Query: 324 DPQCNPPAQVPLSLDIDENIGEQMIRQ 350
+ Q + ++L EN +Q +R+
Sbjct: 281 NQQAMVRRESVVNL---ENFRKQYVRR 304
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 142/293 (48%), Gaps = 41/293 (13%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
+Y +K IG G +GV ++++NE VA+K I +ID RE++ R ++H N
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER--GEKIDE-NVKREIINHRSLRHPN 75
Query: 91 VIALKDVMM-PTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
++ K+V++ PTH + +V E +L + I ++ S D ++F QL+ G+ Y
Sbjct: 76 IVRFKEVILTPTH------LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 129
Query: 149 LHSANILHRDLKPGNLLVNANCD--LKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
H+ + HRDLK N L++ + LKICDFG +++S + Q + V T Y APE+LL
Sbjct: 130 CHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLL 188
Query: 207 CCDNYGTSIDVWSVGC-IFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPK 265
+ G DVWS G ++ ++G P E N K I + Q
Sbjct: 189 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY----------- 237
Query: 266 ARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPY 318
++P HIS P L+ ++ V +P+KRI++ E H +
Sbjct: 238 ------AIP--DYVHIS-------PECRHLISRIFVADPAKRISIPEIRNHEW 275
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 149/327 (45%), Gaps = 52/327 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVA---IKKINNVFENR-IDALRTLRELVLLRHIKHDNV 91
+ +G G + +V + T + A IKK + R + RE+ +LR + H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
I L DV + DV L+ EL+ +L + +SLS + F+ Q+L G+ YLH
Sbjct: 78 ITLHDVYE-----NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 151 SANILHRDLKPGN-LLVNANC---DLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
+ I H DLKP N +L++ N +K+ DFGLA +F + T + APE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-GTPEFVAPEIV- 190
Query: 207 CCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN 263
NY G D+WS+G I +L F G L I SV + D EF
Sbjct: 191 ---NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV---SYDFDEEF--- 241
Query: 264 PKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLY 323
+ LA D ++K+LV E KR+T+ EAL+HP+I+ +
Sbjct: 242 ---------------------FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD 280
Query: 324 DPQCNPPAQVPLSLDIDENIGEQMIRQ 350
+ Q + ++L EN +Q +R+
Sbjct: 281 NQQAMVRRESVVNL---ENFRKQYVRR 304
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 140/293 (47%), Gaps = 41/293 (13%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
+Y +K IG G +GV ++++NE VA+K I A RE++ R ++H N
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIAANVKREIINHRSLRHPN 76
Query: 91 VIALKDVMM-PTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
++ K+V++ PTH + +V E +L + I ++ S D ++F QL+ G+ Y
Sbjct: 77 IVRFKEVILTPTH------LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 149 LHSANILHRDLKPGNLLVNANCD--LKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
H+ + HRDLK N L++ + LKICDFG +++S + Q + V T Y APE+LL
Sbjct: 131 CHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLL 189
Query: 207 CCDNYGTSIDVWSVGC-IFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPK 265
+ G DVWS G ++ ++G P E N K I + Q
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY----------- 238
Query: 266 ARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPY 318
++P HIS P L+ ++ V +P+KRI++ E H +
Sbjct: 239 ------AIP--DYVHIS-------PECRHLISRIFVADPAKRISIPEIRNHEW 276
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 134/286 (46%), Gaps = 40/286 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDAL-RTLRELVLLRHIKHDN 90
Y +K +G G++G V + + T +KVA+K IN + D R RE+ LR ++H +
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+I L DV+ S ++ +V E +L I +S + F Q++ ++Y H
Sbjct: 70 IIKLYDVIK-----SKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 124
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEYVVTRWYRAPELLLCCD 209
I+HRDLKP NLL++ + ++KI DFGL+ + GN F+ + Y APE++
Sbjct: 125 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKTSCGSPNYAAPEVISGKL 182
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
G +DVWS G I +L R+ F D+
Sbjct: 183 YAGPEVDVWSCGVILYVMLCRRLPF---------------------------DDESIPVL 215
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
K++ S G + +L P A L+++ML+ P RI++ E +Q
Sbjct: 216 FKNI--SNGVY--TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 257
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 134/286 (46%), Gaps = 40/286 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDAL-RTLRELVLLRHIKHDN 90
Y +K +G G++G V + + T +KVA+K IN + D R RE+ LR ++H +
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+I L DV+ S ++ +V E +L I +S + F Q++ ++Y H
Sbjct: 66 IIKLYDVIK-----SKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 120
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEYVVTRWYRAPELLLCCD 209
I+HRDLKP NLL++ + ++KI DFGL+ + GN F+ + Y APE++
Sbjct: 121 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKTSCGSPNYAAPEVISGKL 178
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
G +DVWS G I +L R+ F D+
Sbjct: 179 YAGPEVDVWSCGVILYVMLCRRLPF---------------------------DDESIPVL 211
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
K++ S G + +L P A L+++ML+ P RI++ E +Q
Sbjct: 212 FKNI--SNGVY--TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 253
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 134/286 (46%), Gaps = 40/286 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDAL-RTLRELVLLRHIKHDN 90
Y +K +G G++G V + + T +KVA+K IN + D R RE+ LR ++H +
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+I L DV+ S ++ +V E +L I +S + F Q++ ++Y H
Sbjct: 76 IIKLYDVIK-----SKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 130
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEYVVTRWYRAPELLLCCD 209
I+HRDLKP NLL++ + ++KI DFGL+ + GN F+ + Y APE++
Sbjct: 131 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKTSCGSPNYAAPEVISGKL 188
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
G +DVWS G I +L R+ F D+
Sbjct: 189 YAGPEVDVWSCGVILYVMLCRRLPF---------------------------DDESIPVL 221
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
K++ S G + +L P A L+++ML+ P RI++ E +Q
Sbjct: 222 FKNI--SNGVY--TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 263
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 134/286 (46%), Gaps = 40/286 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDAL-RTLRELVLLRHIKHDN 90
Y +K +G G++G V + + T +KVA+K IN + D R RE+ LR ++H +
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+I L DV+ S ++ +V E +L I +S + F Q++ ++Y H
Sbjct: 75 IIKLYDVIK-----SKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 129
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEYVVTRWYRAPELLLCCD 209
I+HRDLKP NLL++ + ++KI DFGL+ + GN F+ + Y APE++
Sbjct: 130 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN--FLKTSCGSPNYAAPEVISGKL 187
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
G +DVWS G I +L R+ F D+
Sbjct: 188 YAGPEVDVWSCGVILYVMLCRRLPF---------------------------DDESIPVL 220
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
K++ S G + +L P A L+++ML+ P RI++ E +Q
Sbjct: 221 FKNI--SNGVY--TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 144/293 (49%), Gaps = 45/293 (15%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRT---LRELVLLRHIKHDNVIAL 94
IG+GA+ VV INRET ++ A+K ++ L T RE + +KH +++ L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 95 KDVMMPTHRISFKDVYLVYELMD-TDL-HQIIKSSQS---LSNDHCKYFVFQLLRGLKYL 149
+ + Y+V+E MD DL +I+K + + S +++ Q+L L+Y
Sbjct: 92 LETYSSDGML-----YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 150 HSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
H NI+HRD+KP N+L+ + + +K+ DFG+A + V T + APE++
Sbjct: 147 HDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVK 206
Query: 207 CCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKA 266
+ YG +DVW G I +L F GT + +L + + + NP+
Sbjct: 207 -REPYGKPVDVWGCGVILFILLSGCLPFYGT----KERLFEGIIKGKYKM------NPR- 254
Query: 267 RRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+ +HIS A DL+++ML+ +P++RITV EAL HP++
Sbjct: 255 ----------QWSHISE-------SAKDLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 130/283 (45%), Gaps = 41/283 (14%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
+ +DVWS G + +L G P + ++ E+ D + + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP-----------------WDQPSDSXQEYSDWKEKKTY 226
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ + + D L LL K+LV PS RIT+ +
Sbjct: 227 LNP------------WKKIDSAPLALLHKILVENPSARITIPD 257
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 141/301 (46%), Gaps = 46/301 (15%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
IG G+ G+VC + R + + VA+KK++ + R + L E+V++R +H+NV+ + +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYNS 216
Query: 98 MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHR 157
+ ++++V E ++ I + ++ + +L+ L LH+ ++HR
Sbjct: 217 YL-----VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 271
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDV 217
D+K ++L+ + +K+ DFG V T ++ APEL+ YG +D+
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDI 330
Query: 218 WSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN--PKARRFIKSLPY 275
WS+G + E++ +P + L +K+I DN P+ + K P
Sbjct: 331 WSLGIMVIEMVDGEPPYFNEPPLKAMKMI--------------RDNLPPRLKNLHKVSPS 376
Query: 276 SRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPPAQ-VP 334
+G L ++LV +P++R T E L+HP+++ + PPA VP
Sbjct: 377 LKG----------------FLDRLLVRDPAQRATAAELLKHPFLA-----KAGPPASIVP 415
Query: 335 L 335
L
Sbjct: 416 L 416
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 140/301 (46%), Gaps = 46/301 (15%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
IG G+ G+VC + R + + VA+KK++ + R + L E+V++R +H+NV+
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVE---- 90
Query: 98 MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHR 157
M + ++++V E ++ I + ++ + +L+ L LH+ ++HR
Sbjct: 91 -MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 149
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDV 217
D+K ++L+ + +K+ DFG V T ++ APEL+ YG +D+
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDI 208
Query: 218 WSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN--PKARRFIKSLPY 275
WS+G + E++ +P + L +K+I DN P+ + K P
Sbjct: 209 WSLGIMVIEMVDGEPPYFNEPPLKAMKMI--------------RDNLPPRLKNLHKVSPS 254
Query: 276 SRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPPAQ-VP 334
+G L ++LV +P++R T E L+HP+++ + PPA VP
Sbjct: 255 LKG----------------FLDRLLVRDPAQRATAAELLKHPFLA-----KAGPPASIVP 293
Query: 335 L 335
L
Sbjct: 294 L 294
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 141/301 (46%), Gaps = 46/301 (15%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
IG G+ G+VC + R + + VA+KK++ + R + L E+V++R +H+NV+ + +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVEMYNS 139
Query: 98 MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHR 157
+ ++++V E ++ I + ++ + +L+ L LH+ ++HR
Sbjct: 140 YL-----VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 194
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDV 217
D+K ++L+ + +K+ DFG V T ++ APEL+ YG +D+
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDI 253
Query: 218 WSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN--PKARRFIKSLPY 275
WS+G + E++ +P + L +K+I DN P+ + K P
Sbjct: 254 WSLGIMVIEMVDGEPPYFNEPPLKAMKMI--------------RDNLPPRLKNLHKVSPS 299
Query: 276 SRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPPAQ-VP 334
+G L ++LV +P++R T E L+HP+++ + PPA VP
Sbjct: 300 LKG----------------FLDRLLVRDPAQRATAAELLKHPFLA-----KAGPPASIVP 338
Query: 335 L 335
L
Sbjct: 339 L 339
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 132/284 (46%), Gaps = 43/284 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHENVVK 69
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 70 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 211 YGTSIDVWSVGCIFAEILGRKPIF--PGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +DVWS G + +L + + P C Q+ +D +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------------QEYSDWK--------- 222
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ T+++ + + D L LL K+LV PS RIT+ +
Sbjct: 223 -------EKKTYLNP-WKKIDSAPLALLHKILVENPSARITIPD 258
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 140/301 (46%), Gaps = 46/301 (15%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
IG G+ G+VC + R + + VA+KK++ + R + L E+V++R +H+NV+
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVE---- 85
Query: 98 MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHR 157
M + ++++V E ++ I + ++ + +L+ L LH+ ++HR
Sbjct: 86 -MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 144
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDV 217
D+K ++L+ + +K+ DFG V T ++ APEL+ YG +D+
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDI 203
Query: 218 WSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN--PKARRFIKSLPY 275
WS+G + E++ +P + L +K+I DN P+ + K P
Sbjct: 204 WSLGIMVIEMVDGEPPYFNEPPLKAMKMI--------------RDNLPPRLKNLHKVSPS 249
Query: 276 SRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPPAQ-VP 334
+G L ++LV +P++R T E L+HP+++ + PPA VP
Sbjct: 250 LKG----------------FLDRLLVRDPAQRATAAELLKHPFLA-----KAGPPASIVP 288
Query: 335 L 335
L
Sbjct: 289 L 289
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 140/301 (46%), Gaps = 46/301 (15%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
IG G+ G+VC + R + + VA+KK++ + R + L E+V++R +H+NV+
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVE---- 92
Query: 98 MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHR 157
M + ++++V E ++ I + ++ + +L+ L LH+ ++HR
Sbjct: 93 -MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 151
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDV 217
D+K ++L+ + +K+ DFG V T ++ APEL+ YG +D+
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDI 210
Query: 218 WSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN--PKARRFIKSLPY 275
WS+G + E++ +P + L +K+I DN P+ + K P
Sbjct: 211 WSLGIMVIEMVDGEPPYFNEPPLKAMKMI--------------RDNLPPRLKNLHKVSPS 256
Query: 276 SRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPPAQ-VP 334
+G L ++LV +P++R T E L+HP+++ + PPA VP
Sbjct: 257 LKG----------------FLDRLLVRDPAQRATAAELLKHPFLA-----KAGPPASIVP 295
Query: 335 L 335
L
Sbjct: 296 L 296
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 140/301 (46%), Gaps = 46/301 (15%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
IG G+ G+VC + R + + VA+KK++ + R + L E+V++R +H+NV+
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELL--FNEVVIMRDYQHENVVE---- 81
Query: 98 MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHR 157
M + ++++V E ++ I + ++ + +L+ L LH+ ++HR
Sbjct: 82 -MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 140
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDV 217
D+K ++L+ + +K+ DFG V T ++ APEL+ YG +D+
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDI 199
Query: 218 WSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN--PKARRFIKSLPY 275
WS+G + E++ +P + L +K+I DN P+ + K P
Sbjct: 200 WSLGIMVIEMVDGEPPYFNEPPLKAMKMI--------------RDNLPPRLKNLHKVSPS 245
Query: 276 SRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPPAQ-VP 334
+G L ++LV +P++R T E L+HP+++ + PPA VP
Sbjct: 246 LKG----------------FLDRLLVRDPAQRATAAELLKHPFLA-----KAGPPASIVP 284
Query: 335 L 335
L
Sbjct: 285 L 285
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 138/304 (45%), Gaps = 49/304 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVA---IKKINNVFENR-IDALRTLRELVLLRHIKHDNV 91
+ +G G + +V + T + A IKK + R + RE+ +LR + H NV
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
I L DV + DV L+ EL+ +L + +SLS + F+ Q+L G+ YLH
Sbjct: 78 ITLHDVYE-----NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 151 SANILHRDLKPGN-LLVNANC---DLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
+ I H DLKP N +L++ N +K+ DFGLA +F + T + APE++
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF-GTPEFVAPEIV- 190
Query: 207 CCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN 263
NY G D+WS+G I +L F G L I SV + D EF
Sbjct: 191 ---NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV---SYDFDEEF--- 241
Query: 264 PKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLY 323
+ LA D ++K+LV E KR+T+ EAL+HP+I+ +
Sbjct: 242 ---------------------FSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD 280
Query: 324 DPQC 327
+ Q
Sbjct: 281 NQQA 284
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 149/335 (44%), Gaps = 45/335 (13%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI-NNVFENRIDALRTLREL 80
W+ +I Y +G GA+ V + ++ T + VAIK I E + ++ E+
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN--EI 67
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDHCKYF 138
+L IKH N++AL D+ S +YL+ +L+ +I++ D +
Sbjct: 68 AVLHKIKHPNIVALDDIYE-----SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR-L 121
Query: 139 VFQLLRGLKYLHSANILHRDLKPGNLL---VNANCDLKICDFGLARTSRGNEQFMTEYVV 195
+FQ+L +KYLH I+HRDLKP NLL ++ + + I DFGL++ T
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CG 180
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQE 255
T Y APE +L Y ++D WS+G I +L P F N KL + + E
Sbjct: 181 TPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE---NDAKLFEQILKAEYE 236
Query: 256 ADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
D + D+ IS A D ++ ++ +P KR T +ALQ
Sbjct: 237 FDSPYWDD-----------------ISD-------SAKDFIRHLMEKDPEKRFTCEQALQ 272
Query: 316 HPYISGLYDPQCNPPAQVPLSLDIDENIGEQMIRQ 350
HP+I+G D + +S I +N + +Q
Sbjct: 273 HPWIAG--DTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 149/335 (44%), Gaps = 45/335 (13%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI-NNVFENRIDALRTLREL 80
W+ +I Y +G GA+ V + ++ T + VAIK I E + ++ E+
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMEN--EI 67
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDHCKYF 138
+L IKH N++AL D+ S +YL+ +L+ +I++ D +
Sbjct: 68 AVLHKIKHPNIVALDDIYE-----SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR-L 121
Query: 139 VFQLLRGLKYLHSANILHRDLKPGNLL---VNANCDLKICDFGLARTSRGNEQFMTEYVV 195
+FQ+L +KYLH I+HRDLKP NLL ++ + + I DFGL++ T
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CG 180
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQE 255
T Y APE +L Y ++D WS+G I +L P F N KL + + E
Sbjct: 181 TPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE---NDAKLFEQILKAEYE 236
Query: 256 ADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
D + D+ IS A D ++ ++ +P KR T +ALQ
Sbjct: 237 FDSPYWDD-----------------ISD-------SAKDFIRHLMEKDPEKRFTCEQALQ 272
Query: 316 HPYISGLYDPQCNPPAQVPLSLDIDENIGEQMIRQ 350
HP+I+G D + +S I +N + +Q
Sbjct: 273 HPWIAG--DTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 149/335 (44%), Gaps = 45/335 (13%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI-NNVFENRIDALRTLREL 80
W+ +I Y +G GA+ V + ++ T + VAIK I E + ++ E+
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN--EI 67
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDHCKYF 138
+L IKH N++AL D+ S +YL+ +L+ +I++ D +
Sbjct: 68 AVLHKIKHPNIVALDDIYE-----SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR-L 121
Query: 139 VFQLLRGLKYLHSANILHRDLKPGNLL---VNANCDLKICDFGLARTSRGNEQFMTEYVV 195
+FQ+L +KYLH I+HRDLKP NLL ++ + + I DFGL++ T
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CG 180
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQE 255
T Y APE +L Y ++D WS+G I +L P F N KL + + E
Sbjct: 181 TPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE---NDAKLFEQILKAEYE 236
Query: 256 ADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
D + D+ IS A D ++ ++ +P KR T +ALQ
Sbjct: 237 FDSPYWDD-----------------ISD-------SAKDFIRHLMEKDPEKRFTCEQALQ 272
Query: 316 HPYISGLYDPQCNPPAQVPLSLDIDENIGEQMIRQ 350
HP+I+G D + +S I +N + +Q
Sbjct: 273 HPWIAG--DTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 132/284 (46%), Gaps = 43/284 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAEILGRKPIF--PGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +DVWS G + +L + + P C Q+ +D +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------------QEYSDWK--------- 221
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ T+++ + + D L LL K+LV PS RIT+ +
Sbjct: 222 -------EKKTYLNP-WKKIDSAPLALLHKILVENPSARITIPD 257
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/281 (30%), Positives = 132/281 (46%), Gaps = 48/281 (17%)
Query: 78 RELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCK 136
RE+ +LR + H N+I L DV + DV L+ EL+ +L + +SLS +
Sbjct: 64 REVSILRQVLHPNIITLHDVYE-----NRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLARTSRGNEQFMTE 192
F+ Q+L G+ YLH+ I H DLKP N +L++ N +K+ DFGLA +F
Sbjct: 119 SFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNI 178
Query: 193 YVVTRWYRAPELLLCCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISV 249
+ T + APE++ NY G D+WS+G I +L F G L I +V
Sbjct: 179 F-GTPEFVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV 233
Query: 250 FGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRIT 309
+ D EF + Q LA D ++K+LV E KR+T
Sbjct: 234 ---SYDFDEEF------------------------FSQTSELAKDFIRKLLVKETRKRLT 266
Query: 310 VTEALQHPYISGLYDPQCNPPAQVPLSLDIDENIGEQMIRQ 350
+ EAL+HP+I+ + Q + ++L EN +Q +R+
Sbjct: 267 IQEALRHPWITPVDTQQAMVRRESVVNL---ENFKKQYVRR 304
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 132/284 (46%), Gaps = 43/284 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEIXINKMLNHENVVK 68
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAEILGRKPIF--PGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +DVWS G + +L + + P C Q+ +D +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------------QEYSDWK--------- 221
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ T+++ + + D L LL K+LV PS RIT+ +
Sbjct: 222 -------EKKTYLNP-WKKIDSAPLALLHKILVENPSARITIPD 257
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 132/284 (46%), Gaps = 43/284 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAEILGRKPIF--PGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +DVWS G + +L + + P C Q+ +D +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------------QEYSDWK--------- 221
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ T+++ + + D L LL K+LV PS RIT+ +
Sbjct: 222 -------EKKTYLNP-WKKIDSAPLALLHKILVENPSARITIPD 257
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 132/284 (46%), Gaps = 43/284 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAEILGRKPIF--PGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +DVWS G + +L + + P C Q+ +D +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------------QEYSDWK--------- 221
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ T+++ + + D L LL K+LV PS RIT+ +
Sbjct: 222 -------EKKTYLNP-WKKIDSAPLALLHKILVENPSARITIPD 257
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 132/284 (46%), Gaps = 43/284 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 70 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 211 YGTSIDVWSVGCIFAEILGRKPIF--PGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +DVWS G + +L + + P C Q+ +D +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------------QEYSDWK--------- 222
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ T+++ + + D L LL K+LV PS RIT+ +
Sbjct: 223 -------EKKTYLNP-WKKIDSAPLALLHKILVENPSARITIPD 258
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 132/284 (46%), Gaps = 43/284 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAEILGRKPIF--PGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +DVWS G + +L + + P C Q+ +D +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------------QEYSDWK--------- 221
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ T+++ + + D L LL K+LV PS RIT+ +
Sbjct: 222 -------EKKTYLNP-WKKIDSAPLALLHKILVENPSARITIPD 257
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 132/284 (46%), Gaps = 43/284 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAEILGRKPIF--PGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +DVWS G + +L + + P C Q+ +D +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------------QEYSDWK--------- 221
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ T+++ + + D L LL K+LV PS RIT+ +
Sbjct: 222 -------EKKTYLNP-WKKIDSAPLALLHKILVENPSARITIPD 257
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 139/306 (45%), Gaps = 43/306 (14%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKI-NNVFENRIDALRTLREL 80
W+ +I Y +G GA+ V + ++ T + VAIK I E + ++ E+
Sbjct: 10 WKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMEN--EI 67
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDHCKYF 138
+L IKH N++AL D+ S +YL+ +L+ +I++ D +
Sbjct: 68 AVLHKIKHPNIVALDDIYE-----SGGHLYLIMQLVSGGELFDRIVEKGFYTERDASR-L 121
Query: 139 VFQLLRGLKYLHSANILHRDLKPGNLL---VNANCDLKICDFGLARTSRGNEQFMTEYVV 195
+FQ+L +KYLH I+HRDLKP NLL ++ + + I DFGL++ T
Sbjct: 122 IFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTA-CG 180
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQE 255
T Y APE +L Y ++D WS+G I +L P F N KL + + E
Sbjct: 181 TPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE---NDAKLFEQILKAEYE 236
Query: 256 ADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
D + D+ IS A D ++ ++ +P KR T +ALQ
Sbjct: 237 FDSPYWDD-----------------ISD-------SAKDFIRHLMEKDPEKRFTCEQALQ 272
Query: 316 HPYISG 321
HP+I+G
Sbjct: 273 HPWIAG 278
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 129/284 (45%), Gaps = 43/284 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAEILGRKPIF--PGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 225
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
++ + + D L LL K+LV PS RIT+ +
Sbjct: 226 YLNP------------WKKIDSAPLALLHKILVENPSARITIPD 257
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 129/284 (45%), Gaps = 43/284 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 70 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 211 YGTSIDVWSVGCIFAEILGRKPIF--PGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +DVWS G + +L + + P C E+ D + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC------------------QEYSDWKEKKT 226
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
++ + + D L LL K+LV PS RIT+ +
Sbjct: 227 YLNP------------WKKIDSAPLALLHKILVENPSARITIPD 258
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 132/284 (46%), Gaps = 43/284 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 67
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 68 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 123 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 211 YGTSIDVWSVGCIFAEILGRKPIF--PGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +DVWS G + +L + + P C Q+ +D +
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------------QEYSDWK--------- 220
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ T+++ + + D L LL K+LV PS RIT+ +
Sbjct: 221 -------EKKTYLNP-WKKIDSAPLALLHKILVENPSARITIPD 256
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 132/284 (46%), Gaps = 43/284 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 70 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 211 YGTSIDVWSVGCIFAEILGRKPIF--PGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +DVWS G + +L + + P C Q+ +D +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------------QEYSDWK--------- 222
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ T+++ + + D L LL K+LV PS RIT+ +
Sbjct: 223 -------EKKTYLNP-WKKIDSAPLALLHKILVENPSARITIPD 258
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 132/284 (46%), Gaps = 43/284 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAEILGRKPIF--PGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +DVWS G + +L + + P C Q+ +D +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------------QEYSDWK--------- 221
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ T+++ + + D L LL K+LV PS RIT+ +
Sbjct: 222 -------EKKTYLNP-WKKIDSAPLALLHKILVENPSARITIPD 257
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 130/283 (45%), Gaps = 41/283 (14%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 70 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
+ +DVWS G + +L G P + ++ E+ D + + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP-----------------WDQPSDSCQEYSDWKEKKTY 227
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ + + D L LL K+LV PS RIT+ +
Sbjct: 228 LNP------------WKKIDSAPLALLHKILVENPSARITIPD 258
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 130/283 (45%), Gaps = 41/283 (14%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 70 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
+ +DVWS G + +L G P + ++ E+ D + + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP-----------------WDQPSDSCQEYSDWKEKKTY 227
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ + + D L LL K+LV PS RIT+ +
Sbjct: 228 LNP------------WKKIDSAPLALLHKILVENPSARITIPD 258
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 130/283 (45%), Gaps = 41/283 (14%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 69
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 70 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
+ +DVWS G + +L G P + ++ E+ D + + +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP-----------------WDQPSDSCQEYSDWKEKKTY 227
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ + + D L LL K+LV PS RIT+ +
Sbjct: 228 LNP------------WKKIDSAPLALLHKILVENPSARITIPD 258
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 132/284 (46%), Gaps = 43/284 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAEILGRKPIF--PGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +DVWS G + +L + + P C Q+ +D +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------------QEYSDWK--------- 221
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ T+++ + + D L LL K+LV PS RIT+ +
Sbjct: 222 -------EKKTYLNP-WKKIDSAPLALLHKILVENPSARITIPD 257
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 132/284 (46%), Gaps = 43/284 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAEILGRKPIF--PGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +DVWS G + +L + + P C Q+ +D +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------------QEYSDWK--------- 221
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ T+++ + + D L LL K+LV PS RIT+ +
Sbjct: 222 -------EKKTYLNP-WKKIDSAPLALLHKILVENPSARITIPD 257
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 141/293 (48%), Gaps = 41/293 (13%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
+Y +K IG G +GV ++++NE VA+K I +ID RE++ R ++H N
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER--GEKIDE-NVKREIINHRSLRHPN 76
Query: 91 VIALKDVMM-PTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
++ K+V++ PTH + +V E +L + I ++ S D ++F QL+ G+ Y
Sbjct: 77 IVRFKEVILTPTH------LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 149 LHSANILHRDLKPGNLLVNANCD--LKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
H+ + HRDLK N L++ + LKIC FG +++S + Q + V T Y APE+LL
Sbjct: 131 CHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQ-PKDTVGTPAYIAPEVLL 189
Query: 207 CCDNYGTSIDVWSVGC-IFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPK 265
+ G DVWS G ++ ++G P E N K I + Q
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY----------- 238
Query: 266 ARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPY 318
++P HIS P L+ ++ V +P+KRI++ E H +
Sbjct: 239 ------AIP--DYVHIS-------PECRHLISRIFVADPAKRISIPEIRNHEW 276
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 132/288 (45%), Gaps = 42/288 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
IG G+Y V I++ TN + A+K I+ + + + +LLR+ +H N+I LKDV
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIE-----ILLRYGQHPNIITLKDV 84
Query: 98 MMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILH 156
K VY+V ELM +L I + S +F + + ++YLH+ ++H
Sbjct: 85 YD-----DGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVH 139
Query: 157 RDLKPGNLL-VNANCD---LKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
RDLKP N+L V+ + + ++ICDFG A+ R + T + APE+L Y
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLE-RQGYD 198
Query: 213 TSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+ D+WS+G + +L G P G + D P+ +
Sbjct: 199 AACDIWSLGVLLYTMLTGYTPFANGPD-----------------------DTPE--EILA 233
Query: 272 SLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+ + + + A DL+ KML +P +R+T L+HP+I
Sbjct: 234 RIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 141/293 (48%), Gaps = 41/293 (13%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
+Y +K IG G +GV ++++NE VA+K I +ID RE++ R ++H N
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIER--GEKIDE-NVKREIINHRSLRHPN 76
Query: 91 VIALKDVMM-PTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
++ K+V++ PTH + +V E +L + I ++ S D ++F QL+ G+ Y
Sbjct: 77 IVRFKEVILTPTH------LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 149 LHSANILHRDLKPGNLLVNANCD--LKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
H+ + HRDLK N L++ + LKIC FG +++S + Q + V T Y APE+LL
Sbjct: 131 CHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST-VGTPAYIAPEVLL 189
Query: 207 CCDNYGTSIDVWSVGC-IFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPK 265
+ G DVWS G ++ ++G P E N K I + Q
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY----------- 238
Query: 266 ARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPY 318
++P HIS P L+ ++ V +P+KRI++ E H +
Sbjct: 239 ------AIP--DYVHIS-------PECRHLISRIFVADPAKRISIPEIRNHEW 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 141/308 (45%), Gaps = 57/308 (18%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-------TLREL 80
+D Y + +G G + VV + T + A K I + R + R RE+
Sbjct: 8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK---KRRTKSSRRGVSREDIEREV 64
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFV 139
+L+ I+H NVI L +V DV L+ EL+ +L + +SL+ + F+
Sbjct: 65 SILKEIQHPNVITLHEVYENK-----TDVILILELVAGGELFDFLAEKESLTEEEATEFL 119
Query: 140 FQLLRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLA-RTSRGNEQFMTEYV 194
Q+L G+ YLHS I H DLKP N +L++ N +KI DFGLA + GNE
Sbjct: 120 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIF 177
Query: 195 VTRWYRAPELLLCCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFG 251
T + APE++ NY G D+WS+G I +L F G + + + +V
Sbjct: 178 GTPEFVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSA 230
Query: 252 TQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E + E+ N A LA D ++++LV +P KR+T+
Sbjct: 231 VNYEFEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQ 266
Query: 312 EALQHPYI 319
++LQHP+I
Sbjct: 267 DSLQHPWI 274
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 131/284 (46%), Gaps = 43/284 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GAYG V ++NR T E VA+K ++ + +D ++ E+ + + H+NV+
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINAMLNHENVVK 69
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 70 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 125 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 211 YGTSIDVWSVGCIFAEILGRKPIF--PGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +DVWS G + +L + + P C Q+ +D +
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------------QEYSDWK--------- 222
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ T+++ + + D L LL K+LV PS RIT+ +
Sbjct: 223 -------EKKTYLNP-WKKIDSAPLALLHKILVENPSARITIPD 258
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 141/308 (45%), Gaps = 57/308 (18%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-------TLREL 80
+D Y + +G G + VV + T + A K I + R + R RE+
Sbjct: 9 VDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIK---KRRTKSSRRGVSREDIEREV 65
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFV 139
+L+ I+H NVI L +V DV L+ EL+ +L + +SL+ + F+
Sbjct: 66 SILKEIQHPNVITLHEVYENK-----TDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 140 FQLLRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLA-RTSRGNEQFMTEYV 194
Q+L G+ YLHS I H DLKP N +L++ N +KI DFGLA + GNE
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIF 178
Query: 195 VTRWYRAPELLLCCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFG 251
T + APE++ NY G D+WS+G I +L F G + + + +V
Sbjct: 179 GTPEFVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSA 231
Query: 252 TQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E + E+ N A LA D ++++LV +P KR+T+
Sbjct: 232 VNYEFEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQ 267
Query: 312 EALQHPYI 319
++LQHP+I
Sbjct: 268 DSLQHPWI 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 141/308 (45%), Gaps = 57/308 (18%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-------TLREL 80
+D Y + +G G + VV + T + A K I + R + R RE+
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK---KRRTKSSRRGVSREDIEREV 65
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFV 139
+L+ I+H NVI L +V DV L+ EL+ +L + +SL+ + F+
Sbjct: 66 SILKEIQHPNVITLHEVYENK-----TDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 140 FQLLRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLA-RTSRGNEQFMTEYV 194
Q+L G+ YLHS I H DLKP N +L++ N +KI DFGLA + GNE
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIF 178
Query: 195 VTRWYRAPELLLCCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFG 251
T + APE++ NY G D+WS+G I +L F G + + + +V
Sbjct: 179 GTPEFVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSA 231
Query: 252 TQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E + E+ N A LA D ++++LV +P KR+T+
Sbjct: 232 VNYEFEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQ 267
Query: 312 EALQHPYI 319
++LQHP+I
Sbjct: 268 DSLQHPWI 275
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 46/338 (13%)
Query: 20 TMWQTLFEIDTKYVPIKP-IGRGAYGVVCSSINRETNEKVAIKKI-NNVFENRIDALRTL 77
+ W+ E K K +G GA+ V + + T + A+K I + + ++
Sbjct: 11 SSWKKQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIEN- 69
Query: 78 RELVLLRHIKHDNVIALKDVM-MPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHC 135
E+ +LR IKH+N++AL+D+ P H +YLV +L+ +L I +
Sbjct: 70 -EIAVLRKIKHENIVALEDIYESPNH------LYLVMQLVSGGELFDRIVEKGFYTEKDA 122
Query: 136 KYFVFQLLRGLKYLHSANILHRDLKPGNLLV---NANCDLKICDFGLARTSRGNEQFMTE 192
+ Q+L + YLH I+HRDLKP NLL + + I DFGL++ G M+
Sbjct: 123 STLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM-EGKGDVMST 181
Query: 193 YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGT 252
T Y APE +L Y ++D WS+G I +L P F N KL +
Sbjct: 182 ACGTPGYVAPE-VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE---NDSKLFEQILKA 237
Query: 253 QQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ E D + D+ IS A D ++ ++ +P+KR T +
Sbjct: 238 EYEFDSPYWDD-----------------ISD-------SAKDFIRNLMEKDPNKRYTCEQ 273
Query: 313 ALQHPYISGLYDPQCNPPAQVPLSLDIDENIGEQMIRQ 350
A +HP+I+G D N +S I +N + RQ
Sbjct: 274 AARHPWIAG--DTALNKNIHESVSAQIRKNFAKSKWRQ 309
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 139/293 (47%), Gaps = 41/293 (13%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
+Y +K IG G +GV +++ NE VA+K I +ID RE++ R ++H N
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIER--GEKIDE-NVKREIINHRSLRHPN 76
Query: 91 VIALKDVMM-PTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
++ K+V++ PTH + +V E +L + I ++ S D ++F QL+ G+ Y
Sbjct: 77 IVRFKEVILTPTH------LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSY 130
Query: 149 LHSANILHRDLKPGNLLVNANCD--LKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
H+ + HRDLK N L++ + LKI DFG ++ S + Q + V T Y APE+LL
Sbjct: 131 AHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA-VGTPAYIAPEVLL 189
Query: 207 CCDNYGTSIDVWSVGC-IFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPK 265
+ G DVWS G ++ ++G P E N K I + Q
Sbjct: 190 KKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQY----------- 238
Query: 266 ARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPY 318
++P HIS P L+ ++ V +P+KRI++ E H +
Sbjct: 239 ------AIP--DYVHIS-------PECRHLISRIFVADPAKRISIPEIRNHEW 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 141/308 (45%), Gaps = 57/308 (18%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-------TLREL 80
+D Y + +G G + VV + T + A K I + R + R RE+
Sbjct: 8 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK---KRRTKSSRRGVSREDIEREV 64
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFV 139
+L+ I+H NVI L +V DV L+ EL+ +L + +SL+ + F+
Sbjct: 65 SILKEIQHPNVITLHEVYENK-----TDVILILELVAGGELFDFLAEKESLTEEEATEFL 119
Query: 140 FQLLRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLA-RTSRGNEQFMTEYV 194
Q+L G+ YLHS I H DLKP N +L++ N +KI DFGLA + GNE
Sbjct: 120 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIF 177
Query: 195 VTRWYRAPELLLCCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFG 251
T + APE++ NY G D+WS+G I +L F G + + + +V
Sbjct: 178 GTPEFVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSA 230
Query: 252 TQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E + E+ N A LA D ++++LV +P KR+T+
Sbjct: 231 VNYEFEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQ 266
Query: 312 EALQHPYI 319
++LQHP+I
Sbjct: 267 DSLQHPWI 274
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 141/308 (45%), Gaps = 57/308 (18%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-------TLREL 80
+D Y + +G G + VV + T + A K I + R + R RE+
Sbjct: 9 VDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIK---KRRTKSSRRGVSREDIEREV 65
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFV 139
+L+ I+H NVI L +V DV L+ EL+ +L + +SL+ + F+
Sbjct: 66 SILKEIQHPNVITLHEVYENK-----TDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 140 FQLLRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLA-RTSRGNEQFMTEYV 194
Q+L G+ YLHS I H DLKP N +L++ N +KI DFGLA + GNE
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIF 178
Query: 195 VTRWYRAPELLLCCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFG 251
T + APE++ NY G D+WS+G I +L F G + + + +V
Sbjct: 179 GTPEFVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSA 231
Query: 252 TQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E + E+ N A LA D ++++LV +P KR+T+
Sbjct: 232 VNYEFEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQ 267
Query: 312 EALQHPYI 319
++LQHP+I
Sbjct: 268 DSLQHPWI 275
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 135/293 (46%), Gaps = 36/293 (12%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
IG G+ G+VC + + + +VA+K ++ + R + L E+V++R +H NV+
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELL--FNEVVIMRDYQHFNVVE---- 106
Query: 98 MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHR 157
M + ++++++ E + I S L+ + +L+ L YLH+ ++HR
Sbjct: 107 -MYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHR 165
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDV 217
D+K ++L+ + +K+ DFG + V T ++ APE ++ Y T +D+
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPE-VISRSLYATEVDI 224
Query: 218 WSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSR 277
WS+G + E++ +P + + +K D+P P +
Sbjct: 225 WSLGIMVIEMVDGEPPYFSDSPVQAMK--------------RLRDSPP--------PKLK 262
Query: 278 GTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPP 330
+H + P+ D L++MLV +P +R T E L HP++ P+C P
Sbjct: 263 NSH------KVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTGLPECLVP 309
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 141/308 (45%), Gaps = 57/308 (18%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-------TLREL 80
+D Y + +G G + VV + T + A K I + R + R RE+
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK---KRRTKSSRRGVSREDIEREV 65
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFV 139
+L+ I+H NVI L +V DV L+ EL+ +L + +SL+ + F+
Sbjct: 66 SILKEIQHPNVITLHEVYENK-----TDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 140 FQLLRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLA-RTSRGNEQFMTEYV 194
Q+L G+ YLHS I H DLKP N +L++ N +KI DFGLA + GNE
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIF 178
Query: 195 VTRWYRAPELLLCCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFG 251
T + APE++ NY G D+WS+G I +L F G + + + +V
Sbjct: 179 GTPEFVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSA 231
Query: 252 TQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E + E+ N A LA D ++++LV +P KR+T+
Sbjct: 232 VNYEFEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQ 267
Query: 312 EALQHPYI 319
++LQHP+I
Sbjct: 268 DSLQHPWI 275
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 141/308 (45%), Gaps = 57/308 (18%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-------TLREL 80
+D Y + +G G + VV + T + A K I + R + R RE+
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK---KRRTKSSRRGVSREDIEREV 65
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFV 139
+L+ I+H NVI L +V DV L+ EL+ +L + +SL+ + F+
Sbjct: 66 SILKEIQHPNVITLHEVYENK-----TDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 140 FQLLRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLA-RTSRGNEQFMTEYV 194
Q+L G+ YLHS I H DLKP N +L++ N +KI DFGLA + GNE
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIF 178
Query: 195 VTRWYRAPELLLCCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFG 251
T + APE++ NY G D+WS+G I +L F G + + + +V
Sbjct: 179 GTPAFVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSA 231
Query: 252 TQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E + E+ N A LA D ++++LV +P KR+T+
Sbjct: 232 VNYEFEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQ 267
Query: 312 EALQHPYI 319
++LQHP+I
Sbjct: 268 DSLQHPWI 275
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 109/218 (50%), Gaps = 33/218 (15%)
Query: 109 VYLVYEL-MDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVN 167
VY+V E+ L ++ K ++++ +YF+ Q ++G++YLH+ ++HRDLK GNL +N
Sbjct: 117 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 176
Query: 168 ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI 227
+ D+KI DFGLA + + + T Y APE +LC + +D+WS+GCI +
Sbjct: 177 DDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPE-VLCKKGHSFEVDIWSLGCILYTL 235
Query: 228 LGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQ 287
L KP F T CL + + IK YS HI
Sbjct: 236 LVGKPPFE-TSCLKETYI-----------------------RIKKNEYSVPRHI------ 265
Query: 288 ADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
+P+A L+++ML +P+ R +V E L + + Y P
Sbjct: 266 -NPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAP 302
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 141/308 (45%), Gaps = 57/308 (18%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-------TLREL 80
+D Y + +G G + VV + T + A K I + R + R RE+
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK---KRRTKSSRRGVSREDIEREV 65
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFV 139
+L+ I+H NVI L +V DV L+ EL+ +L + +SL+ + F+
Sbjct: 66 SILKEIQHPNVITLHEVYENK-----TDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 140 FQLLRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLA-RTSRGNEQFMTEYV 194
Q+L G+ YLHS I H DLKP N +L++ N +KI DFGLA + GNE
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIF 178
Query: 195 VTRWYRAPELLLCCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFG 251
T + APE++ NY G D+WS+G I +L F G + + + +V
Sbjct: 179 GTPEFVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSA 231
Query: 252 TQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E + E+ N A LA D ++++LV +P KR+T+
Sbjct: 232 VNYEFEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQ 267
Query: 312 EALQHPYI 319
++LQHP+I
Sbjct: 268 DSLQHPWI 275
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 123/262 (46%), Gaps = 49/262 (18%)
Query: 79 ELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYELMDT-DLHQIIKSSQSLSNDH 134
E+ + R + H +V+ F+D V++V EL L ++ K ++L+
Sbjct: 71 EISIHRSLAHQHVVGFHGF--------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPE 122
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYV 194
+Y++ Q++ G +YLH ++HRDLK GNL +N + ++KI DFGLA + +
Sbjct: 123 ARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC 182
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQ 254
T Y APE +L + +DVWS+GCI +L KP F T CL + L
Sbjct: 183 GTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYL--------- 231
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
IK YS HI +P+A L+QKML +P+ R T+ E L
Sbjct: 232 --------------RIKKNEYSIPKHI-------NPVAASLIQKMLQTDPTARPTINELL 270
Query: 315 QHPYISGLYDPQCNPPAQVPLS 336
+ + Y PA++P++
Sbjct: 271 NDEFFTSGYI-----PARLPIT 287
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 141/308 (45%), Gaps = 57/308 (18%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-------TLREL 80
+D Y + +G G + VV + T + A K I + R + R RE+
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK---KRRTKSSRRGVSREDIEREV 65
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFV 139
+L+ I+H NVI L +V DV L+ EL+ +L + +SL+ + F+
Sbjct: 66 SILKEIQHPNVITLHEVYENK-----TDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 140 FQLLRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLA-RTSRGNEQFMTEYV 194
Q+L G+ YLHS I H DLKP N +L++ N +KI DFGLA + GNE
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIF 178
Query: 195 VTRWYRAPELLLCCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFG 251
T + APE++ NY G D+WS+G I +L F G + + + +V
Sbjct: 179 GTPEFVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSA 231
Query: 252 TQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E + E+ N A LA D ++++LV +P KR+T+
Sbjct: 232 VNYEFEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQ 267
Query: 312 EALQHPYI 319
++LQHP+I
Sbjct: 268 DSLQHPWI 275
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 141/308 (45%), Gaps = 57/308 (18%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-------TLREL 80
+D Y + +G G + VV + T + A K I + R + R RE+
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK---KRRTKSSRRGVSREDIEREV 65
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFV 139
+L+ I+H NVI L +V DV L+ EL+ +L + +SL+ + F+
Sbjct: 66 SILKEIQHPNVITLHEVYENK-----TDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 140 FQLLRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLA-RTSRGNEQFMTEYV 194
Q+L G+ YLHS I H DLKP N +L++ N +KI DFGLA + GNE
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIF 178
Query: 195 VTRWYRAPELLLCCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFG 251
T + APE++ NY G D+WS+G I +L F G + + + +V
Sbjct: 179 GTPEFVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSA 231
Query: 252 TQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E + E+ N A LA D ++++LV +P KR+T+
Sbjct: 232 VNYEFEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQ 267
Query: 312 EALQHPYI 319
++LQHP+I
Sbjct: 268 DSLQHPWI 275
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 141/308 (45%), Gaps = 57/308 (18%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-------TLREL 80
+D Y + +G G + VV + T + A K I + R + R RE+
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK---KRRTKSSRRGVSREDIEREV 65
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFV 139
+L+ I+H NVI L +V DV L+ EL+ +L + +SL+ + F+
Sbjct: 66 SILKEIQHPNVITLHEVYENK-----TDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 140 FQLLRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLA-RTSRGNEQFMTEYV 194
Q+L G+ YLHS I H DLKP N +L++ N +KI DFGLA + GNE
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIF 178
Query: 195 VTRWYRAPELLLCCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFG 251
T + APE++ NY G D+WS+G I +L F G + + + +V
Sbjct: 179 GTPEFVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSA 231
Query: 252 TQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E + E+ N A LA D ++++LV +P KR+T+
Sbjct: 232 VNYEFEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQ 267
Query: 312 EALQHPYI 319
++LQHP+I
Sbjct: 268 DSLQHPWI 275
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 141/308 (45%), Gaps = 57/308 (18%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-------TLREL 80
+D Y + +G G + VV + T + A K I + R + R RE+
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK---KRRTKSSRRGVSREDIEREV 65
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFV 139
+L+ I+H NVI L +V DV L+ EL+ +L + +SL+ + F+
Sbjct: 66 SILKEIQHPNVITLHEVYENK-----TDVILIGELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 140 FQLLRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLA-RTSRGNEQFMTEYV 194
Q+L G+ YLHS I H DLKP N +L++ N +KI DFGLA + GNE
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIF 178
Query: 195 VTRWYRAPELLLCCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFG 251
T + APE++ NY G D+WS+G I +L F G + + + +V
Sbjct: 179 GTPEFVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSA 231
Query: 252 TQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E + E+ N A LA D ++++LV +P KR+T+
Sbjct: 232 VNYEFEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQ 267
Query: 312 EALQHPYI 319
++LQHP+I
Sbjct: 268 DSLQHPWI 275
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 109/218 (50%), Gaps = 33/218 (15%)
Query: 109 VYLVYEL-MDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVN 167
VY+V E+ L ++ K ++++ +YF+ Q ++G++YLH+ ++HRDLK GNL +N
Sbjct: 101 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 160
Query: 168 ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI 227
+ D+KI DFGLA + + + T Y APE +LC + +D+WS+GCI +
Sbjct: 161 DDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPE-VLCKKGHSFEVDIWSLGCILYTL 219
Query: 228 LGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQ 287
L KP F T CL + + IK YS HI
Sbjct: 220 LVGKPPFE-TSCLKETYIR-----------------------IKKNEYSVPRHI------ 249
Query: 288 ADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
+P+A L+++ML +P+ R +V E L + + Y P
Sbjct: 250 -NPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAP 286
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 123/262 (46%), Gaps = 49/262 (18%)
Query: 79 ELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYELMDT-DLHQIIKSSQSLSNDH 134
E+ + R + H +V+ F+D V++V EL L ++ K ++L+
Sbjct: 67 EISIHRSLAHQHVVGFHGF--------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPE 118
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYV 194
+Y++ Q++ G +YLH ++HRDLK GNL +N + ++KI DFGLA + +
Sbjct: 119 ARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC 178
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQ 254
T Y APE +L + +DVWS+GCI +L KP F T CL + L
Sbjct: 179 GTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYL--------- 227
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
IK YS HI +P+A L+QKML +P+ R T+ E L
Sbjct: 228 --------------RIKKNEYSIPKHI-------NPVAASLIQKMLQTDPTARPTINELL 266
Query: 315 QHPYISGLYDPQCNPPAQVPLS 336
+ + Y PA++P++
Sbjct: 267 NDEFFTSGYI-----PARLPIT 283
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 123/262 (46%), Gaps = 49/262 (18%)
Query: 79 ELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYELMDT-DLHQIIKSSQSLSNDH 134
E+ + R + H +V+ F+D V++V EL L ++ K ++L+
Sbjct: 67 EISIHRSLAHQHVVGFHGF--------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPE 118
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYV 194
+Y++ Q++ G +YLH ++HRDLK GNL +N + ++KI DFGLA + +
Sbjct: 119 ARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLC 178
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQ 254
T Y APE +L + +DVWS+GCI +L KP F T CL + L
Sbjct: 179 GTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYL--------- 227
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
IK YS HI +P+A L+QKML +P+ R T+ E L
Sbjct: 228 --------------RIKKNEYSIPKHI-------NPVAASLIQKMLQTDPTARPTINELL 266
Query: 315 QHPYISGLYDPQCNPPAQVPLS 336
+ + Y PA++P++
Sbjct: 267 NDEFFTSGYI-----PARLPIT 283
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 141/308 (45%), Gaps = 57/308 (18%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-------TLREL 80
+D Y + +G G + VV + T + A K I + R + R RE+
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK---KRRTKSSRRGVSREDIEREV 65
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFV 139
+L+ I+H NVI L +V DV L+ EL+ +L + +SL+ + F+
Sbjct: 66 SILKEIQHPNVITLHEVYENK-----TDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 140 FQLLRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLA-RTSRGNEQFMTEYV 194
Q+L G+ YLHS I H DLKP N +L++ N +KI DFGLA + GNE
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIF 178
Query: 195 VTRWYRAPELLLCCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFG 251
T + APE++ NY G D+WS+G I +L F G + + + +V
Sbjct: 179 GTPEFVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSA 231
Query: 252 TQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E + E+ N A LA D ++++LV +P KR+T+
Sbjct: 232 VNYEFEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQ 267
Query: 312 EALQHPYI 319
++LQHP+I
Sbjct: 268 DSLQHPWI 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 141/308 (45%), Gaps = 57/308 (18%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-------TLREL 80
+D Y + +G G + VV + T + A K I + R + R RE+
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIK---KRRTKSSRRGVSREDIEREV 65
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFV 139
+L+ I+H NVI L +V DV L+ EL+ +L + +SL+ + F+
Sbjct: 66 SILKEIQHPNVITLHEVYENK-----TDVILILELVAGGELFDFLAEKESLTEEEATEFL 120
Query: 140 FQLLRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLA-RTSRGNEQFMTEYV 194
Q+L G+ YLHS I H DLKP N +L++ N +KI DFGLA + GNE
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE--FKNIF 178
Query: 195 VTRWYRAPELLLCCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFG 251
T + APE++ NY G D+WS+G I +L F G + + + +V
Sbjct: 179 GTPEFVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGD---TKQETLANVSA 231
Query: 252 TQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
E + E+ N A LA D ++++LV +P KR+T+
Sbjct: 232 VNYEFEDEYFSNTSA------------------------LAKDFIRRLLVKDPKKRMTIQ 267
Query: 312 EALQHPYI 319
++LQHP+I
Sbjct: 268 DSLQHPWI 275
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 33/218 (15%)
Query: 109 VYLVYEL-MDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVN 167
VY+V E+ L ++ K ++++ +YF+ Q ++G++YLH+ ++HRDLK GNL +N
Sbjct: 117 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 176
Query: 168 ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI 227
+ D+KI DFGLA + + T Y APE +LC + +D+WS+GCI +
Sbjct: 177 DDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPE-VLCKKGHSFEVDIWSLGCILYTL 235
Query: 228 LGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQ 287
L KP F T CL + + IK YS HI
Sbjct: 236 LVGKPPFE-TSCLKETYI-----------------------RIKKNEYSVPRHI------ 265
Query: 288 ADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
+P+A L+++ML +P+ R +V E L + + Y P
Sbjct: 266 -NPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAP 302
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 123/262 (46%), Gaps = 49/262 (18%)
Query: 79 ELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYEL-MDTDLHQIIKSSQSLSNDH 134
E+ + R + H +V+ F+D V++V EL L ++ K ++L+
Sbjct: 89 EISIHRSLAHQHVVGFHGF--------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPE 140
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYV 194
+Y++ Q++ G +YLH ++HRDLK GNL +N + ++KI DFGLA + +
Sbjct: 141 ARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC 200
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQ 254
T Y APE +L + +DVWS+GCI +L KP F T CL + L
Sbjct: 201 GTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYL--------- 249
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
IK YS HI +P+A L+QKML +P+ R T+ E L
Sbjct: 250 --------------RIKKNEYSIPKHI-------NPVAASLIQKMLQTDPTARPTINELL 288
Query: 315 QHPYISGLYDPQCNPPAQVPLS 336
+ + Y PA++P++
Sbjct: 289 NDEFFTSGYI-----PARLPIT 305
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 123/262 (46%), Gaps = 49/262 (18%)
Query: 79 ELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYELMDT-DLHQIIKSSQSLSNDH 134
E+ + R + H +V+ F+D V++V EL L ++ K ++L+
Sbjct: 91 EISIHRSLAHQHVVGFHGF--------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPE 142
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYV 194
+Y++ Q++ G +YLH ++HRDLK GNL +N + ++KI DFGLA + +
Sbjct: 143 ARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC 202
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQ 254
T Y APE +L + +DVWS+GCI +L KP F T CL + L
Sbjct: 203 GTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKETYL--------- 251
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
IK YS HI +P+A L+QKML +P+ R T+ E L
Sbjct: 252 --------------RIKKNEYSIPKHI-------NPVAASLIQKMLQTDPTARPTINELL 290
Query: 315 QHPYISGLYDPQCNPPAQVPLS 336
+ + Y PA++P++
Sbjct: 291 NDEFFTSGYI-----PARLPIT 307
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 123/262 (46%), Gaps = 49/262 (18%)
Query: 79 ELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYELMDT-DLHQIIKSSQSLSNDH 134
E+ + R + H +V+ F+D V++V EL L ++ K ++L+
Sbjct: 65 EISIHRSLAHQHVVGFHGF--------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPE 116
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYV 194
+Y++ Q++ G +YLH ++HRDLK GNL +N + ++KI DFGLA + +
Sbjct: 117 ARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLC 176
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQ 254
T Y APE +L + +DVWS+GCI +L KP F T CL + L
Sbjct: 177 GTPNYIAPE-VLSKKGHSFEVDVWSIGCIMYTLLVGKPPFE-TSCLKETYL--------- 225
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
IK YS HI +P+A L+QKML +P+ R T+ E L
Sbjct: 226 --------------RIKKNEYSIPKHI-------NPVAASLIQKMLQTDPTARPTINELL 264
Query: 315 QHPYISGLYDPQCNPPAQVPLS 336
+ + Y PA++P++
Sbjct: 265 NDEFFTSGYI-----PARLPIT 281
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 108/218 (49%), Gaps = 33/218 (15%)
Query: 109 VYLVYEL-MDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVN 167
VY+V E+ L ++ K ++++ +YF+ Q ++G++YLH+ ++HRDLK GNL +N
Sbjct: 117 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 176
Query: 168 ANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI 227
+ D+KI DFGLA + + T Y APE +LC + +D+WS+GCI +
Sbjct: 177 DDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPE-VLCKKGHSFEVDIWSLGCILYTL 235
Query: 228 LGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQ 287
L KP F T CL + + IK YS HI
Sbjct: 236 LVGKPPF-ETSCLKETYI-----------------------RIKKNEYSVPRHI------ 265
Query: 288 ADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDP 325
+P+A L+++ML +P+ R +V E L + + Y P
Sbjct: 266 -NPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAP 302
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 149/330 (45%), Gaps = 48/330 (14%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINN-VFENRIDALRTLRELVLLRHIKHD 89
+Y + +G+G++G V ++ T ++ A+K I+ + + D LRE+ LL+ + H
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 90 NVIALKDVMMPTHRISFKD---VYLVYEL-MDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
N+ L + F+D YLV E+ +L I S + S + Q+L G
Sbjct: 87 NIXKLYEF--------FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 138
Query: 146 LKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
+ Y H I+HRDLKP NLL+ + + +++I DFGL+ +++ + + T +Y AP
Sbjct: 139 ITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-XKDKIGTAYYIAP 197
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
E+L Y DVWS G I +L P F G + LK +
Sbjct: 198 EVLHGT--YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV---------------- 239
Query: 263 NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGL 322
+ ++ LP + + A DL++K L + PS RI+ +AL H +I
Sbjct: 240 --EKGKYTFELPQ---------WKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTY 288
Query: 323 YDPQ--CNPPAQVPLSLDIDENIGEQMIRQ 350
Q + P+ L+I + G Q + Q
Sbjct: 289 TKEQISVDVPSLDNAILNIRQFQGTQKLAQ 318
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 131/284 (46%), Gaps = 43/284 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIA 93
++ +G GA G V ++NR T E VA+K ++ + +D ++ E+ + + + H+NV+
Sbjct: 11 VQTLGEGAAGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNHENVVK 68
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
HR YL E +L I+ + + F QL+ G+ YLH
Sbjct: 69 FY-----GHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGN--EQFMTEYVVTRWYRAPELLLCCDN 210
I HRD+KP NLL++ +LKI DFGLA R N E+ + + T Y APELL +
Sbjct: 124 GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 211 YGTSIDVWSVGCIFAEILGRKPIF--PGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +DVWS G + +L + + P C Q+ +D +
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------------QEYSDWK--------- 221
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ T+++ + + D L LL K+LV PS RIT+ +
Sbjct: 222 -------EKKTYLNP-WKKIDSAPLALLHKILVENPSARITIPD 257
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 151/336 (44%), Gaps = 53/336 (15%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNE-KVAIKKINNVFENRIDALRTLRELVLLRHI 86
+ +Y + +G G +G V ++ + +VA+K I NV + R +A R E+ +L+ I
Sbjct: 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR-EAARL--EINVLKKI 73
Query: 87 KH-DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSS--QSLSNDHCKYFVFQLL 143
K D V+M + + +EL+ + + +K + Q H ++ +QL
Sbjct: 74 KEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLC 133
Query: 144 RGLKYLHSANILHRDLKPGNLL-VNA------------------NCDLKICDFGLARTSR 184
L++LH + H DLKP N+L VN+ N +++ DFG A
Sbjct: 134 HALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF-- 191
Query: 185 GNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLK 244
+ + T V TR YR PE++L + DVWS+GCI E +F E L
Sbjct: 192 -DHEHHTTIVATRHYRPPEVILEL-GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 249
Query: 245 LIISVFG---------TQQE-----ADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADP 290
++ + G T+++ L + +N R++K Y D
Sbjct: 250 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKE-----NCKPLKSYMLQDS 304
Query: 291 LA----LDLLQKMLVFEPSKRITVTEALQHPYISGL 322
L DL+++ML F+P++RIT+ EAL HP+ +GL
Sbjct: 305 LEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 340
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 155/333 (46%), Gaps = 47/333 (14%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNE-KVAIKKINNVFENRIDALRTLRELVLLRHI 86
+ +Y + +G G +G V ++ + +VA+K I NV + R +A R E+ +L+ I
Sbjct: 49 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR-EAARL--EINVLKKI 105
Query: 87 KH-DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSS--QSLSNDHCKYFVFQLL 143
K D V+M + + +EL+ + + +K + Q H ++ +QL
Sbjct: 106 KEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLC 165
Query: 144 RGLKYLHSANILHRDLKPGNLL-VNA------------------NCDLKICDFGLARTSR 184
L++LH + H DLKP N+L VN+ N +++ DFG A
Sbjct: 166 HALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF-- 223
Query: 185 GNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLK 244
+ + T V TR YR PE++L + DVWS+GCI E +F E L
Sbjct: 224 -DHEHHTTIVATRHYRPPEVILEL-GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 281
Query: 245 LIISVFG---------TQQE-----ADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADP 290
++ + G T+++ L + +N R++K +++ L +
Sbjct: 282 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYM--LQDSLEH 339
Query: 291 LAL-DLLQKMLVFEPSKRITVTEALQHPYISGL 322
+ L DL+++ML F+P++RIT+ EAL HP+ +GL
Sbjct: 340 VQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 372
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 139/310 (44%), Gaps = 55/310 (17%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-------TLREL 80
++ Y + +G G + +V + T ++ A K I + R+ + R RE+
Sbjct: 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIK---KRRLSSSRRGVSREEIEREV 59
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFV 139
+LR I+H N+I L D+ DV L+ EL+ +L + +SL+ D F+
Sbjct: 60 NILREIRHPNIITLHDIFENK-----TDVVLILELVSGGELFDFLAEKESLTEDEATQFL 114
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLV----NANCDLKICDFGLARTSRGNEQFMTEYVV 195
Q+L G+ YLHS I H DLKP N+++ N +K+ DFG+A +F +
Sbjct: 115 KQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF-G 173
Query: 196 TRWYRAPELLLCCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGT 252
T + APE++ NY G D+WS+G I +L F G L I +V
Sbjct: 174 TPEFVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV--- 226
Query: 253 QQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ D E+ N LA D ++++LV +P +R+T+ +
Sbjct: 227 NYDFDEEYFSN------------------------TSELAKDFIRRLLVKDPKRRMTIAQ 262
Query: 313 ALQHPYISGL 322
+L+H +I +
Sbjct: 263 SLEHSWIKAI 272
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 155/333 (46%), Gaps = 47/333 (14%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNE-KVAIKKINNVFENRIDALRTLRELVLLRHI 86
+ +Y + +G G +G V ++ + +VA+K I NV + R +A R E+ +L+ I
Sbjct: 26 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR-EAARL--EINVLKKI 82
Query: 87 KH-DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSS--QSLSNDHCKYFVFQLL 143
K D V+M + + +EL+ + + +K + Q H ++ +QL
Sbjct: 83 KEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLC 142
Query: 144 RGLKYLHSANILHRDLKPGNLL-VNA------------------NCDLKICDFGLARTSR 184
L++LH + H DLKP N+L VN+ N +++ DFG A
Sbjct: 143 HALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF-- 200
Query: 185 GNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLK 244
+ + T V TR YR PE++L + DVWS+GCI E +F E L
Sbjct: 201 -DHEHHTTIVATRHYRPPEVILEL-GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 258
Query: 245 LIISVFG---------TQQE-----ADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADP 290
++ + G T+++ L + +N R++K +++ L +
Sbjct: 259 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYM--LQDSLEH 316
Query: 291 LAL-DLLQKMLVFEPSKRITVTEALQHPYISGL 322
+ L DL+++ML F+P++RIT+ EAL HP+ +GL
Sbjct: 317 VQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 349
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 140/296 (47%), Gaps = 47/296 (15%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINN---VFENRIDALRTLRELVLLRHIK 87
+Y +K IG G +GV ++ T E VA+K I + EN RE++ R ++
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDEN------VQREIINHRSLR 74
Query: 88 HDNVIALKDVMM-PTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRG 145
H N++ K+V++ PTH + ++ E +L++ I ++ S D ++F QLL G
Sbjct: 75 HPNIVRFKEVILTPTH------LAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSG 128
Query: 146 LKYLHSANILHRDLKPGNLLVNANCD--LKICDFGLARTSRGNEQFMTEYVVTRWYRAPE 203
+ Y HS I HRDLK N L++ + LKICDFG +++S + Q + V T Y APE
Sbjct: 129 VSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-VGTPAYIAPE 187
Query: 204 LLLCCDNYGTSIDVWSVGC-IFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
+LL + G DVWS G ++ ++G P E E D
Sbjct: 188 VLLRQEYDGKIADVWSCGVTLYVMLVGAYPF---------------------EDPEEPRD 226
Query: 263 NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPY 318
K + I S+ YS I + P L+ ++ V +P+ RI++ E H +
Sbjct: 227 YRKTIQRILSVKYSIPDDI-----RISPECCHLISRIFVADPATRISIPEIKTHSW 277
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 144/338 (42%), Gaps = 45/338 (13%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIK 87
I ++ ++ +G GA+ V R T + A+K I R +L E+ +L+ IK
Sbjct: 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN--EIAVLKKIK 64
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGL 146
H+N++ L+D+ T YLV +L+ +L I + + Q+L +
Sbjct: 65 HENIVTLEDIYESTTH-----YYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAV 119
Query: 147 KYLHSANILHRDLKPGNLLV---NANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPE 203
KYLH I+HRDLKP NLL N + I DFGL++ + M+ T Y APE
Sbjct: 120 KYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--IMSTACGTPGYVAPE 177
Query: 204 LLLCCDNYGTSIDVWSVGCI-FAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
+L Y ++D WS+G I + + G P + TE +F +E EF
Sbjct: 178 -VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--------KLFEKIKEGYYEF-- 226
Query: 263 NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGL 322
S + A D + +L +P++R T +AL HP+I G
Sbjct: 227 ------------------ESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDG- 267
Query: 323 YDPQCNPPAQVPLSLDIDENIGEQMIRQMMWNETLHYH 360
+ + +SL I +N + RQ + +H
Sbjct: 268 -NTALHRDIYPSVSLQIQKNFAKSKWRQAFNAAAVVHH 304
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 131/284 (46%), Gaps = 42/284 (14%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIK-HDNVIAL 94
KP+G G++ + +++++N+ A+K + R++A T +E+ L+ + H N++ L
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVK----IISKRMEA-NTQKEITALKLCEGHPNIVKL 71
Query: 95 KDVMMPTHRISFKD---VYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+V F D +LV EL++ +L + IK + S Y + +L+ + ++H
Sbjct: 72 HEV--------FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMH 123
Query: 151 SANILHRDLKPGNLLV---NANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLC 207
++HRDLKP NLL N N ++KI DFG AR + Q + T Y APE LL
Sbjct: 124 DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPE-LLN 182
Query: 208 CDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKAR 267
+ Y S D+WS+G I +L + F + + + ++ D F
Sbjct: 183 QNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSF------- 235
Query: 268 RFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
+ A DL+Q +L +P+KR+ ++
Sbjct: 236 -------------EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMS 266
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 131/288 (45%), Gaps = 42/288 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
IG G+Y V I++ TN + A+K I+ + + + +LLR+ +H N+I LKDV
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIE-----ILLRYGQHPNIITLKDV 84
Query: 98 MMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILH 156
K VY+V EL +L I + S +F + + ++YLH+ ++H
Sbjct: 85 YD-----DGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVH 139
Query: 157 RDLKPGNLL-VNANCD---LKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
RDLKP N+L V+ + + ++ICDFG A+ R + T + APE+L Y
Sbjct: 140 RDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLE-RQGYD 198
Query: 213 TSIDVWSVGC-IFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+ D+WS+G ++ + G P G + + E + + +F
Sbjct: 199 AACDIWSLGVLLYTXLTGYTPFANGPD----------------DTPEEILARIGSGKFSL 242
Query: 272 SLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
S Y + A DL+ K L +P +R+T L+HP+I
Sbjct: 243 SGGY---------WNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 154/342 (45%), Gaps = 46/342 (13%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSIN-RETNEKVAIKKINNVFENRIDALRTLRELVLLRHI 86
+ +Y + +G G +G V ++ R +VA+K I NV + + A + L +
Sbjct: 31 LQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEK 90
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN--DHCKYFVFQLLR 144
DN V M + + +EL+ +K + L ++ FQL +
Sbjct: 91 DPDNKNLC--VQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQ 148
Query: 145 GLKYLHSANILHRDLKPGNLL-VNANCDL------------------KICDFGLARTSRG 185
+K+LH + H DLKP N+L VN++ +L ++ DFG A
Sbjct: 149 AVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF--- 205
Query: 186 NEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKL 245
+ + + V TR YRAPE++L + DVWS+GCI E +F + L +
Sbjct: 206 DHEHHSTIVSTRHYRAPEVILEL-GWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAM 264
Query: 246 IISVFG---------TQQE-----ADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPL 291
+ + G T+++ L++ +N A R+++ +++S + L
Sbjct: 265 MERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQL 324
Query: 292 ALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPPAQV 333
DL++ ML +EP+KR+T+ EALQHP+ + L + PP ++
Sbjct: 325 -FDLIESMLEYEPAKRLTLGEALQHPFFARL---RAEPPNKL 362
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 138/310 (44%), Gaps = 55/310 (17%)
Query: 27 EIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-------TLRE 79
+++ Y + +G G + +V + T ++ A K I + R+ + R RE
Sbjct: 9 DVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIK---KRRLSSSRRGVSREEIERE 65
Query: 80 LVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYF 138
+ +LR I+H N+I L D+ DV L+ EL+ +L + +SL+ D F
Sbjct: 66 VNILREIRHPNIITLHDIFENK-----TDVVLILELVSGGELFDFLAEKESLTEDEATQF 120
Query: 139 VFQLLRGLKYLHSANILHRDLKPGNLLV----NANCDLKICDFGLARTSRGNEQFMTEYV 194
+ Q+L G+ YLHS I H DLKP N+++ N +K+ DFG+A +F +
Sbjct: 121 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF- 179
Query: 195 VTRWYRAPELLLCCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFG 251
T + APE++ NY G D+WS+G I +L F G L I +V
Sbjct: 180 GTPEFVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV-- 233
Query: 252 TQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
+ D E+ N LA D ++++LV +P +R+ +
Sbjct: 234 -NYDFDEEYFSN------------------------TSELAKDFIRRLLVKDPKRRMXIA 268
Query: 312 EALQHPYISG 321
++L+H +I
Sbjct: 269 QSLEHSWIKA 278
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 138/307 (44%), Gaps = 49/307 (15%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIK--KINNVFENRIDALRTL--RELVLL 83
++ Y + +G G + +V + T ++ A K K + +R R RE+ +L
Sbjct: 24 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNIL 83
Query: 84 RHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQL 142
R I+H N+I L D+ DV L+ EL+ +L + +SL+ D F+ Q+
Sbjct: 84 REIRHPNIITLHDIFENK-----TDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 138
Query: 143 LRGLKYLHSANILHRDLKPGN-LLVNANC---DLKICDFGLARTSRGNEQFMTEYVVTRW 198
L G+ YLHS I H DLKP N +L++ N +K+ DFG+A +F + T
Sbjct: 139 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF-GTPE 197
Query: 199 YRAPELLLCCDNY---GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQE 255
+ APE++ NY G D+WS+G I +L F G L I +V +
Sbjct: 198 FVAPEIV----NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAV---NYD 250
Query: 256 ADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
D E+ N LA D ++++LV +P +R+ + ++L+
Sbjct: 251 FDEEYFSN------------------------TSELAKDFIRRLLVKDPKRRMXIAQSLE 286
Query: 316 HPYISGL 322
H +I +
Sbjct: 287 HSWIKAI 293
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 140/316 (44%), Gaps = 42/316 (13%)
Query: 10 GMKSRGKHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFEN 69
G + G+ M + Y + +G+GA+ VV +++ T + A K IN +
Sbjct: 9 GGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS 68
Query: 70 RIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQ 128
D + RE + R ++H N++ L D + SF YLV++L+ +L + I + +
Sbjct: 69 ARDFQKLEREARICRKLQHPNIVRLHDSIQEE---SFH--YLVFDLVTGGELFEDIVARE 123
Query: 129 SLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCD---LKICDFGLARTSRG 185
S + + Q+L + Y HS I+HR+LKP NLL+ + +K+ DFGLA
Sbjct: 124 FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183
Query: 186 NEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKL 245
+E + + T Y +PE+L D Y +D+W+ G I +L P
Sbjct: 184 SEAWHG-FAGTPGYLSPEVLK-KDPYSKPVDIWACGVILYILLVGYP------------- 228
Query: 246 IISVFGTQQEADLEFIDNPKARRF--IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFE 303
F D + R + IK+ Y + S + P A L+ ML
Sbjct: 229 -------------PFWDEDQHRLYAQIKAGAYD---YPSPEWDTVTPEAKSLIDSMLTVN 272
Query: 304 PSKRITVTEALQHPYI 319
P KRIT +AL+ P+I
Sbjct: 273 PKKRITADQALKVPWI 288
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 142/293 (48%), Gaps = 45/293 (15%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRT---LRELVLLRHIKHDNVIAL 94
IG+G + VV INRET ++ A+K ++ L T RE + +KH +++ L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 95 KDVMMPTHRISFKDVYLVYELMD-TDL-HQIIKSSQS---LSNDHCKYFVFQLLRGLKYL 149
+ S +Y+V+E MD DL +I+K + + S +++ Q+L L+Y
Sbjct: 94 LETYS-----SDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 148
Query: 150 HSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
H NI+HRD+KP +L+ + + +K+ FG+A + V T + APE++
Sbjct: 149 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVK 208
Query: 207 CCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKA 266
+ YG +DVW G I +L F GT + +L + + + NP+
Sbjct: 209 -REPYGKPVDVWGCGVILFILLSGCLPFYGT----KERLFEGIIKGKYKM------NPR- 256
Query: 267 RRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+ +HIS A DL+++ML+ +P++RITV EAL HP++
Sbjct: 257 ----------QWSHISE-------SAKDLVRRMLMLDPAERITVYEALNHPWL 292
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 142/293 (48%), Gaps = 45/293 (15%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRT---LRELVLLRHIKHDNVIAL 94
IG+G + VV INRET ++ A+K ++ L T RE + +KH +++ L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 95 KDVMMPTHRISFKDVYLVYELMD-TDL-HQIIKSSQS---LSNDHCKYFVFQLLRGLKYL 149
+ S +Y+V+E MD DL +I+K + + S +++ Q+L L+Y
Sbjct: 92 LETYS-----SDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYC 146
Query: 150 HSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
H NI+HRD+KP +L+ + + +K+ FG+A + V T + APE++
Sbjct: 147 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVK 206
Query: 207 CCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKA 266
+ YG +DVW G I +L F GT + +L + + + NP+
Sbjct: 207 -REPYGKPVDVWGCGVILFILLSGCLPFYGT----KERLFEGIIKGKYKM------NPR- 254
Query: 267 RRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+ +HIS A DL+++ML+ +P++RITV EAL HP++
Sbjct: 255 ----------QWSHISE-------SAKDLVRRMLMLDPAERITVYEALNHPWL 290
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 42/288 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+GA+ VV +++ T + A K IN + D + RE + R ++H N++ L D
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 98 MMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILH 156
+ SF YLV++L+ +L + I + + S + + Q+L + Y HS I+H
Sbjct: 74 IQEE---SFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVH 128
Query: 157 RDLKPGNLLVNANCD---LKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGT 213
R+LKP NLL+ + +K+ DFGLA +E + + T Y +PE+L D Y
Sbjct: 129 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG-FAGTPGYLSPEVLK-KDPYSK 186
Query: 214 SIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF--IK 271
+D+W+ G I +L P F D + R + IK
Sbjct: 187 PVDIWACGVILYILLVGYP--------------------------PFWDEDQHRLYAQIK 220
Query: 272 SLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+ Y + S + P A L+ ML P KRIT +AL+ P+I
Sbjct: 221 AGAYD---YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 42/288 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+GA+ VV +++ T + A K IN + D + RE + R ++H N++ L D
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 98 MMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILH 156
+ SF YLV++L+ +L + I + + S + + Q+L + Y HS I+H
Sbjct: 73 IQEE---SFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVH 127
Query: 157 RDLKPGNLLVNANCD---LKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGT 213
R+LKP NLL+ + +K+ DFGLA +E + + T Y +PE+L D Y
Sbjct: 128 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG-FAGTPGYLSPEVLK-KDPYSK 185
Query: 214 SIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF--IK 271
+D+W+ G I +L P F D + R + IK
Sbjct: 186 PVDIWACGVILYILLVGYP--------------------------PFWDEDQHRLYAQIK 219
Query: 272 SLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+ Y + S + P A L+ ML P KRIT +AL+ P+I
Sbjct: 220 AGAYD---YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 144/325 (44%), Gaps = 68/325 (20%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI--DALRTLRELVLLRHIKH 88
KY+ +G G+YG V ++ ET + A+K + RI +E+ LLR ++H
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH 65
Query: 89 DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCK---YFVFQLLRG 145
NVI L DV+ + + +Y+V E + +++ S C+ YF QL+ G
Sbjct: 66 KNVIQLVDVLYNEEK---QKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFC-QLIDG 121
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLA------------RTSRGNEQFMTEY 193
L+YLHS I+H+D+KPGNLL+ LKI G+A RTS+G+ F
Sbjct: 122 LEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAF---- 177
Query: 194 VVTRWYRAPELLLCCDNY-GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGT 252
+ PE+ D + G +D+WS G I F G N KL ++
Sbjct: 178 ------QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD---NIYKLFENI--- 225
Query: 253 QQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+G++ ++ P DLL+ ML +EP+KR ++ +
Sbjct: 226 -----------------------GKGSY--AIPGDCGPPLSDLLKGMLEYEPAKRFSIRQ 260
Query: 313 ALQHPYISGLYDPQCNPPAQVPLSL 337
QH + + +PPA+ P+ +
Sbjct: 261 IRQHSWFR-----KKHPPAEAPVPI 280
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 42/288 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+GA+ VV +++ T + A K IN + D + RE + R ++H N++ L D
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 98 MMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILH 156
+ SF YLV++L+ +L + I + + S + + Q+L + Y HS I+H
Sbjct: 74 IQEE---SFH--YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVH 128
Query: 157 RDLKPGNLLVNANCD---LKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGT 213
R+LKP NLL+ + +K+ DFGLA +E + + T Y +PE+L D Y
Sbjct: 129 RNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG-FAGTPGYLSPEVLK-KDPYSK 186
Query: 214 SIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF--IK 271
+D+W+ G I +L P F D + R + IK
Sbjct: 187 PVDIWACGVILYILLVGYP--------------------------PFWDEDQHRLYAQIK 220
Query: 272 SLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+ Y + S + P A L+ ML P KRIT +AL+ P+I
Sbjct: 221 AGAYD---YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 19/231 (8%)
Query: 26 FEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRH 85
F+ KYV ++ IG G++G + E + IK+IN + + + RE+ +L +
Sbjct: 20 FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN 79
Query: 86 IKHDNVIALKDVMMPTHRISFKDVYLVYELMD----TDLHQIIKSSQSL--SNDHCKYFV 139
+KH N++ +R SF++ +Y +MD DL + I + + + D +
Sbjct: 80 MKHPNIV--------QYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF 131
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWY 199
Q+ LK++H ILHRD+K N+ + + +++ DFG+AR + + T +Y
Sbjct: 132 VQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYY 191
Query: 200 RAPELLLCCDN--YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
+PE+ C+N Y D+W++GC+ E+ K F N + IIS
Sbjct: 192 LSPEI---CENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS 239
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 108/214 (50%), Gaps = 16/214 (7%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAI-KKINNVFENRIDALRTLRELVLLRHIKHDN 90
Y + IG G+YG C I R+++ K+ + K+++ + + E+ LLR +KH N
Sbjct: 8 YEVLYTIGTGSYGR-CQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDT-DLHQII----KSSQSLSNDHCKYFVFQLLRG 145
++ D ++ + +Y+V E + DL +I K Q L + + QL
Sbjct: 67 IVRYYDRIIDRTNTT---LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 146 LKYLHSAN-----ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
LK H + +LHRDLKP N+ ++ ++K+ DFGLAR +E F E+V T +Y
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYM 183
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIF 234
+PE + +Y D+WS+GC+ E+ P F
Sbjct: 184 SPEQMNRM-SYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 133/297 (44%), Gaps = 46/297 (15%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y ++ +G GA+GVV + + T K IN + +D E+ ++ + H +
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP--LDKYTVKNEISIMNQLHHPKL 110
Query: 92 IALKDVMMPTHRISFKDVY---LVYELMDTD--LHQIIKSSQSLSNDHCKYFVFQLLRGL 146
I L D +F+D Y L+ E + +I +S ++ Q GL
Sbjct: 111 INLHD--------AFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGL 162
Query: 147 KYLHSANILHRDLKPGNLLVNAN--CDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
K++H +I+H D+KP N++ +KI DFGLA T ++ + T + APE+
Sbjct: 163 KHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLA-TKLNPDEIVKVTTATAEFAAPEI 221
Query: 205 LLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNP 264
+ + G D+W++G + +L F G + L L+ + + D EF ++
Sbjct: 222 V-DREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV-------KRCDWEFDEDA 273
Query: 265 KARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
SS+ P+A +LLQK EP KR+TV +AL+HP++ G
Sbjct: 274 ----------------FSSVSPEAKDFIKNLLQK----EPRKRLTVHDALEHPWLKG 310
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 140/289 (48%), Gaps = 46/289 (15%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDAL-RTLRELVLLRHIKHDNVIALKD 96
+G+G++ V + + T +VAIK I+ + + R E+ + +KH +++ L +
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 97 VMMPTHRISFKD---VYLVYEL-MDTDLHQIIKSS-QSLSNDHCKYFVFQLLRGLKYLHS 151
F+D VYLV E+ + ++++ +K+ + S + ++F+ Q++ G+ YLHS
Sbjct: 79 Y--------FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
ILHRDL NLL+ N ++KI DFGLA + + T Y +PE + +
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPE-IATRSAH 189
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
G DVWS+GC+F +L +P F N L ++ AD E
Sbjct: 190 GLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL-------ADYE------------ 230
Query: 272 SLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS 320
+P S L +A DL+ ++L P+ R++++ L HP++S
Sbjct: 231 -MP-------SFLSIEAK----DLIHQLLRRNPADRLSLSSVLDHPFMS 267
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 133/305 (43%), Gaps = 41/305 (13%)
Query: 19 YTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR 78
Y T +I+ Y IGRG++G V ++ + T + A KKI F +D + +
Sbjct: 15 YFQGSTKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK--Q 72
Query: 79 ELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYEL-MDTDLHQIIKSSQSLSNDHCKY 137
E+ +++ + H N+I L + D+YLV EL +L + + +
Sbjct: 73 EIEIMKSLDHPNIIRLYETFEDN-----TDIYLVMELCTGGELFERVVHKRVFRESDAAR 127
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLV---NANCDLKICDFGLARTSRGNEQFMTEYV 194
+ +L + Y H N+ HRDLKP N L + + LK+ DFGLA + + T+ V
Sbjct: 128 IMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK-V 186
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQ 254
T +Y +P++L YG D WS G + +L P F T
Sbjct: 187 GTPYYVSPQVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAP--------------TDX 230
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E L K R + P ++S PQA+ L++++L P +RIT +AL
Sbjct: 231 EVML------KIREGTFTFPEKDWLNVS---PQAE----SLIRRLLTKSPKQRITSLQAL 277
Query: 315 QHPYI 319
+H +
Sbjct: 278 EHEWF 282
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 131/297 (44%), Gaps = 41/297 (13%)
Query: 27 EIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHI 86
+I+ Y IGRG++G V ++ + T + A KKI F +D + +E+ +++ +
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFK--QEIEIMKSL 63
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYEL-MDTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
H N+I L + D+YLV EL +L + + + + +L
Sbjct: 64 DHPNIIRLYETFEDN-----TDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA 118
Query: 146 LKYLHSANILHRDLKPGNLLV---NANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
+ Y H N+ HRDLKP N L + + LK+ DFGLA + + T+ V T +Y +P
Sbjct: 119 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK-VGTPYYVSP 177
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFID 262
++L YG D WS G + +L P F T E L
Sbjct: 178 QVLEGL--YGPECDEWSAGVMMYVLLCGYPPFSAP--------------TDXEVML---- 217
Query: 263 NPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
K R + P ++S PQA+ L++++L P +RIT +AL+H +
Sbjct: 218 --KIREGTFTFPEKDWLNVS---PQAE----SLIRRLLTKSPKQRITSLQALEHEWF 265
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G YG+V + + ++AIK+I L E+ L +H+KH N++
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH--EEIALHKHLKHKNIVQYLGS 73
Query: 98 MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDH---CKYFVFQLLRGLKYLHSANI 154
I + ++ L +++S D+ ++ Q+L GLKYLH I
Sbjct: 74 FSENGFIKI----FMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 129
Query: 155 LHRDLKPGNLLVNANCD-LKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL-LCCDNYG 212
+HRD+K N+L+N LKI DFG ++ G + T Y APE++ YG
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 189
Query: 213 TSIDVWSVGCIFAEILGRKPIF 234
+ D+WS+GC E+ KP F
Sbjct: 190 KAADIWSLGCTIIEMATGKPPF 211
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 11/202 (5%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G YG+V + + ++AIK+I L E+ L +H+KH N++
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH--EEIALHKHLKHKNIVQYLGS 87
Query: 98 MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDH---CKYFVFQLLRGLKYLHSANI 154
I + ++ L +++S D+ ++ Q+L GLKYLH I
Sbjct: 88 FSENGFIKI----FMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143
Query: 155 LHRDLKPGNLLVNANCD-LKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL-LCCDNYG 212
+HRD+K N+L+N LKI DFG ++ G + T Y APE++ YG
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYG 203
Query: 213 TSIDVWSVGCIFAEILGRKPIF 234
+ D+WS+GC E+ KP F
Sbjct: 204 KAADIWSLGCTIIEMATGKPPF 225
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 135/290 (46%), Gaps = 41/290 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKIN-NVFENRIDALRTLRELVLLRHIKHDNVIALKD 96
IG G + V + + T E VAIK ++ N + + ++T E+ L++++H ++ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKT--EIEALKNLRHQHICQLYH 75
Query: 97 VMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANIL 155
V+ ++I ++V E +L I S LS + + Q++ + Y+HS
Sbjct: 76 VLETANKI-----FMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYA 130
Query: 156 HRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV-TRWYRAPELLLCCDNYGTS 214
HRDLKP NLL + LK+ DFGL +GN+ + + + Y APEL+ G+
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSE 190
Query: 215 IDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLP 274
DVWS+G + L +++ F L F D+ + K +
Sbjct: 191 ADVWSMGIL-------------------LYVLMCGF-------LPFDDDNVMALYKKIM- 223
Query: 275 YSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYD 324
RG + + P ++ LLQ+ML +P KRI++ L HP+I Y+
Sbjct: 224 --RGKY--DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQDYN 269
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 132/292 (45%), Gaps = 41/292 (14%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
I +G GA+G V + N+ET+ A K I+ E ++ + E+ +L H N++ L
Sbjct: 42 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY--MVEIDILASCDHPNIVKL 99
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
D + + + +D + ++ + L+ + Q L L YLH I
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN---- 210
+HRDLK GN+L + D+K+ DFG++ + Q ++ T ++ APE+++C +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 211 YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
Y DVWS+G E+ +P P E LN +++++ +
Sbjct: 217 YDYKADVWSLGITLIEMAEIEP--PHHE-LNPMRVLL--------------------KIA 253
Query: 271 KSLP--YSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS 320
KS P ++ + SS + D L+K L R T ++ LQHP+++
Sbjct: 254 KSEPPTLAQPSRWSSNFK-------DFLKKCLEKNVDARWTTSQLLQHPFVT 298
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 132/292 (45%), Gaps = 41/292 (14%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
I +G GA+G V + N+ET+ A K I+ E ++ + E+ +L H N++ L
Sbjct: 42 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY--MVEIDILASCDHPNIVKL 99
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
D + + + +D + ++ + L+ + Q L L YLH I
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN---- 210
+HRDLK GN+L + D+K+ DFG++ + Q ++ T ++ APE+++C +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 211 YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
Y DVWS+G E+ +P P E LN +++++ +
Sbjct: 217 YDYKADVWSLGITLIEMAEIEP--PHHE-LNPMRVLL--------------------KIA 253
Query: 271 KSLP--YSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS 320
KS P ++ + SS + D L+K L R T ++ LQHP+++
Sbjct: 254 KSEPPTLAQPSRWSSNFK-------DFLKKCLEKNVDARWTTSQLLQHPFVT 298
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 136/289 (47%), Gaps = 36/289 (12%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
KY + IG+GA G V ++++ T ++VAI+++N + + + E++++R K+ N
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 78
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
++ D + ++++V E + + + + + L+ L++LH
Sbjct: 79 IVNYLD-----SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
S ++HRD+K N+L+ + +K+ DFG + +E V T ++ APE ++
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPE-VVTRKA 192
Query: 211 YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
YG +D+WS+G + E++ +P + L L L I+ GT + + NP+
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL-IATNGTPE------LQNPE----- 240
Query: 271 KSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+S+++ D L + L + KR + E LQH ++
Sbjct: 241 ---------KLSAIF-------RDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 132/292 (45%), Gaps = 41/292 (14%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
I +G GA+G V + N+ET+ A K I+ E ++ + E+ +L H N++ L
Sbjct: 42 IGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY--MVEIDILASCDHPNIVKL 99
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
D + + + +D + ++ + L+ + Q L L YLH I
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDNKI 156
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN---- 210
+HRDLK GN+L + D+K+ DFG++ + Q ++ T ++ APE+++C +
Sbjct: 157 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRP 216
Query: 211 YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
Y DVWS+G E+ +P P E LN +++++ +
Sbjct: 217 YDYKADVWSLGITLIEMAEIEP--PHHE-LNPMRVLL--------------------KIA 253
Query: 271 KSLP--YSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS 320
KS P ++ + SS + D L+K L R T ++ LQHP+++
Sbjct: 254 KSEPPTLAQPSRWSSNFK-------DFLKKCLEKNVDARWTTSQLLQHPFVT 298
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 150/333 (45%), Gaps = 57/333 (17%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINN-VFENRIDALRTLRELVLLRHIKHDNVIA 93
+K +G+G +G V + T A+K + V + + TL E +L++ +H + A
Sbjct: 14 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 73
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS- 151
LK R+ F V E + +L + + S D +++ +++ L YLHS
Sbjct: 74 LKYSFQTHDRLCF-----VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 128
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
N+++RDLK NL+++ + +KI DFGL + + M + T Y APE+L D Y
Sbjct: 129 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND-Y 187
Query: 212 GTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
G ++D W +G + E++ GR P + NQ E E I +
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPFY------NQ----------DHEKLFELI-------LM 224
Query: 271 KSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRIT-----VTEALQHPYISGL--- 322
+ + + R +L P+A L LL+K +P +R+ E +QH + +G+
Sbjct: 225 EEIRFPR-----TLGPEAKSLLSGLLKK----DPKQRLGGGSEDAKEIMQHRFFAGIVWQ 275
Query: 323 --YDPQCNPP--AQVPLSLD---IDENIGEQMI 348
Y+ + +PP QV D DE QMI
Sbjct: 276 HVYEKKLSPPFKPQVTSETDTRYFDEEFTAQMI 308
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 150/333 (45%), Gaps = 57/333 (17%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINN-VFENRIDALRTLRELVLLRHIKHDNVIA 93
+K +G+G +G V + T A+K + V + + TL E +L++ +H + A
Sbjct: 15 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 74
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS- 151
LK R+ F V E + +L + + S D +++ +++ L YLHS
Sbjct: 75 LKYSFQTHDRLCF-----VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 129
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
N+++RDLK NL+++ + +KI DFGL + + M + T Y APE+L D Y
Sbjct: 130 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND-Y 188
Query: 212 GTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
G ++D W +G + E++ GR P + NQ E E I +
Sbjct: 189 GRAVDWWGLGVVMYEMMCGRLPFY------NQ----------DHEKLFELI-------LM 225
Query: 271 KSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRI-----TVTEALQHPYISGL--- 322
+ + + R +L P+A L LL+K +P +R+ E +QH + +G+
Sbjct: 226 EEIRFPR-----TLGPEAKSLLSGLLKK----DPKQRLGGGSEDAKEIMQHRFFAGIVWQ 276
Query: 323 --YDPQCNPP--AQVPLSLD---IDENIGEQMI 348
Y+ + +PP QV D DE QMI
Sbjct: 277 HVYEKKLSPPFKPQVTSETDTRYFDEEFTAQMI 309
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 150/333 (45%), Gaps = 57/333 (17%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINN-VFENRIDALRTLRELVLLRHIKHDNVIA 93
+K +G+G +G V + T A+K + V + + TL E +L++ +H + A
Sbjct: 13 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 72
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS- 151
LK R+ F V E + +L + + S D +++ +++ L YLHS
Sbjct: 73 LKYSFQTHDRLCF-----VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 127
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
N+++RDLK NL+++ + +KI DFGL + + M + T Y APE+L D Y
Sbjct: 128 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDND-Y 186
Query: 212 GTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
G ++D W +G + E++ GR P + NQ E E I +
Sbjct: 187 GRAVDWWGLGVVMYEMMCGRLPFY------NQ----------DHEKLFELI-------LM 223
Query: 271 KSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRI-----TVTEALQHPYISGL--- 322
+ + + R +L P+A L LL+K +P +R+ E +QH + +G+
Sbjct: 224 EEIRFPR-----TLGPEAKSLLSGLLKK----DPKQRLGGGSEDAKEIMQHRFFAGIVWQ 274
Query: 323 --YDPQCNPP--AQVPLSLD---IDENIGEQMI 348
Y+ + +PP QV D DE QMI
Sbjct: 275 HVYEKKLSPPFKPQVTSETDTRYFDEEFTAQMI 307
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 29/244 (11%)
Query: 30 TKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD 89
+ + I +G+GA+G V + N + AIKKI + E ++ + L E++LL + H
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTI--LSEVMLLASLNHQ 62
Query: 90 NVIAL-------KDVMMPTHRISFKD-VYLVYELMDTDLHQIIKSSQSLSNDHCKYFVF- 140
V+ ++ + P + K +++ E + + S++L+ +Y+
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122
Query: 141 -QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSR--------------G 185
Q+L L Y+HS I+HRDLKP N+ ++ + ++KI DFGLA+ G
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 186 NEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKL 245
+ +T + T Y A E+L +Y ID++S+G IF E++ P G E +N LK
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKK 240
Query: 246 IISV 249
+ SV
Sbjct: 241 LRSV 244
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK IG G++G V + ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 46 IKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E M D+ ++ S H +++ Q++ +YL
Sbjct: 106 LE--------FSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +K+ DFG A+ +G + T Y APE++L
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 213
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 142/355 (40%), Gaps = 79/355 (22%)
Query: 19 YTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI------D 72
Y +L E+ KY IG+G+YGVV +I +T AIK +N +N+I D
Sbjct: 15 YFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMN---KNKIRQINPKD 71
Query: 73 ALRTLRELVLLRHIKHDNVIALKDV----------MMPTHRISFKDVYLVY--------- 113
R E+ L++ + H N+ L +V M H D V+
Sbjct: 72 VERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCA 131
Query: 114 ----------------ELMDTDLHQIIKSSQSLSNDH-CKYFVFQLLRGLKYLHSANILH 156
E ++ +H +S + + + Q+ L YLH+ I H
Sbjct: 132 MDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICH 191
Query: 157 RDLKPGNLL--VNANCDLKICDFGLART----SRGNEQFMTEYVVTRWYRAPELL-LCCD 209
RD+KP N L N + ++K+ DFGL++ + G MT T ++ APE+L +
Sbjct: 192 RDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNE 251
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
+YG D WS G + +L FPG +N I V + L F +NP
Sbjct: 252 SYGPKCDAWSAGVLLHLLLMGAVPFPG---VNDADTISQVLNKK----LCF-ENPN---- 299
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYD 324
Y PLA DLL +L +R ALQHP+IS D
Sbjct: 300 ---------------YNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK IG G++G V + ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 46 IKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E M D+ ++ S H +++ Q++ +YL
Sbjct: 106 LE--------FSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +K+ DFG A+ +G + T Y APE++L
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 213
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 16/214 (7%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAI-KKINNVFENRIDALRTLRELVLLRHIKHDN 90
Y + IG G+YG C I R+++ K+ + K+++ + + E+ LLR +KH N
Sbjct: 8 YEVLYTIGTGSYGR-CQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDT-DLHQII----KSSQSLSNDHCKYFVFQLLRG 145
++ D ++ + +Y+V E + DL +I K Q L + + QL
Sbjct: 67 IVRYYDRIIDRTNTT---LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 146 LKYLHSAN-----ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
LK H + +LHRDLKP N+ ++ ++K+ DFGLAR + F +V T +Y
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYM 183
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIF 234
+PE + +Y D+WS+GC+ E+ P F
Sbjct: 184 SPEQMNRM-SYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 16/214 (7%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAI-KKINNVFENRIDALRTLRELVLLRHIKHDN 90
Y + IG G+YG C I R+++ K+ + K+++ + + E+ LLR +KH N
Sbjct: 8 YEVLYTIGTGSYGR-CQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDT-DLHQII----KSSQSLSNDHCKYFVFQLLRG 145
++ D ++ + +Y+V E + DL +I K Q L + + QL
Sbjct: 67 IVRYYDRIIDRTNTT---LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 146 LKYLHSAN-----ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
LK H + +LHRDLKP N+ ++ ++K+ DFGLAR + F +V T +Y
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYM 183
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIF 234
+PE + +Y D+WS+GC+ E+ P F
Sbjct: 184 SPEQMNRM-SYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDN 90
+ ++ IG G++G V + + +E VAIKK++ + + + ++E+ L+ ++H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 91 VIALKDVMMPTHRISFKDVYLVYEL---MDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLK 147
I + + H +LV E +DL ++ K + L L+GL
Sbjct: 116 TIQYRGCYLREH-----TAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLA 168
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLC 207
YLHS N++HRD+K GN+L++ +K+ DFG A F V T ++ APE++L
Sbjct: 169 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF----VGTPYWMAPEVILA 224
Query: 208 CD--NYGTSIDVWSVGCIFAEILGRKP 232
D Y +DVWS+G E+ RKP
Sbjct: 225 MDEGQYDGKVDVWSLGITCIELAERKP 251
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 120/244 (49%), Gaps = 29/244 (11%)
Query: 30 TKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD 89
+ + I +G+GA+G V + N + AIKKI + E ++ + L E++LL + H
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTI--LSEVMLLASLNHQ 62
Query: 90 NVIAL-------KDVMMPTHRISFKD-VYLVYELMDTDLHQIIKSSQSLSNDHCKYFVF- 140
V+ ++ + P + K +++ E + + S++L+ +Y+
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 141 -QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSR--------------G 185
Q+L L Y+HS I+HRDLKP N+ ++ + ++KI DFGLA+ G
Sbjct: 123 RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 186 NEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKL 245
+ +T + T Y A E+L +Y ID++S+G IF E++ P G E +N LK
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKK 240
Query: 246 IISV 249
+ SV
Sbjct: 241 LRSV 244
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 35/280 (12%)
Query: 3 TLVEPPNGMKSRGKHYYTMWQTLFEIDTKYV-PIKPIGRGAYGVVCSSINRETNEKVAIK 61
T PP + S K ++ FE+ + PI +GRGAYGVV + + + +A+K
Sbjct: 25 TSSTPPRDLDS--KACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVK 82
Query: 62 KINNVFENRIDALRTLREL-VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDL 120
+I N + R L +L + +R + + + DV++ ELMDT L
Sbjct: 83 RIRATV-NSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG-----DVWICMELMDTSL 136
Query: 121 ----HQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA-NILHRDLKPGNLLVNANCDLKIC 175
Q+I Q++ D +++ L++LHS +++HRD+KP N+L+NA +K+C
Sbjct: 137 DKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMC 196
Query: 176 DFGLARTSRGNEQFMTEYVVT------RWYRAPELL---LCCDNYGTSIDVWSVGCIFAE 226
DFG++ ++ + V + Y APE + L Y D+WS+G E
Sbjct: 197 DFGIS-------GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIE 249
Query: 227 I-LGRKPIFPGTECLNQLKLIISVFGTQQEAD---LEFID 262
+ + R P QLK ++ Q AD EF+D
Sbjct: 250 LAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVD 289
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 151/332 (45%), Gaps = 53/332 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINN-VFENRIDALRTLRELVLLRHIKHDNVIA 93
+K +G+G +G V + T A+K + V + + TL E +L++ +H + A
Sbjct: 153 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 212
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS- 151
LK R+ F V E + +L + + S D +++ +++ L YLHS
Sbjct: 213 LKYSFQTHDRLCF-----VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 267
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
N+++RDLK NL+++ + +KI DFGL + + M + T Y APE+L D Y
Sbjct: 268 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDND-Y 326
Query: 212 GTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
G ++D W +G + E++ GR P + NQ E E I +
Sbjct: 327 GRAVDWWGLGVVMYEMMCGRLPFY------NQ----------DHEKLFELI-------LM 363
Query: 271 KSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRIT-----VTEALQHPYISGL--- 322
+ + + R +L P+A L LL+K +P +R+ E +QH + +G+
Sbjct: 364 EEIRFPR-----TLGPEAKSLLSGLLKK----DPKQRLGGGSEDAKEIMQHRFFAGIVWQ 414
Query: 323 --YDPQCNPPAQVPLSLDIDEN-IGEQMIRQM 351
Y+ + +PP + ++ + D E+ QM
Sbjct: 415 HVYEKKLSPPFKPQVTSETDTRYFDEEFTAQM 446
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 104/207 (50%), Gaps = 17/207 (8%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDN 90
+ ++ IG G++G V + + +E VAIKK++ + + + ++E+ L+ ++H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 91 VIALKDVMMPTHRISFKDVYLVYEL---MDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLK 147
I + + H +LV E +DL ++ K + L L+GL
Sbjct: 77 TIQYRGCYLREH-----TAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLA 129
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLC 207
YLHS N++HRD+K GN+L++ +K+ DFG A F V T ++ APE++L
Sbjct: 130 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF----VGTPYWMAPEVILA 185
Query: 208 CD--NYGTSIDVWSVGCIFAEILGRKP 232
D Y +DVWS+G E+ RKP
Sbjct: 186 MDEGQYDGKVDVWSLGITCIELAERKP 212
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 139/301 (46%), Gaps = 41/301 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y +K IG+G + V + + T ++VA++ I+ N + RE+ +++ + H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+ L +V+ K +YLV E ++ + + + + Q++ ++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEYVVTRWYRAPELLLCCD 209
I+HRDLK NLL++A+ ++KI DFG + + GN+ + E+ + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDEFCGSPPYAAPELFQGKK 188
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
G +DVWS+G I ++ F G + L +L+ R
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR----------------------ERV 225
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS-GLYDPQCN 328
+ RG + Y D +LL+K L+ PSKR T+ + ++ +++ G D +
Sbjct: 226 L------RGKYRIPFYMSTD--CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELK 277
Query: 329 P 329
P
Sbjct: 278 P 278
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 147/320 (45%), Gaps = 52/320 (16%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINN-VFENRIDALRTLRELVLLRHIKHDNVIA 93
+K +G+G +G V + T A+K + V + + TL E +L++ +H + A
Sbjct: 156 LKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTA 215
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS- 151
LK R+ F V E + +L + + S D +++ +++ L YLHS
Sbjct: 216 LKYSFQTHDRLCF-----VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE 270
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
N+++RDLK NL+++ + +KI DFGL + + M + T Y APE+L D Y
Sbjct: 271 KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDND-Y 329
Query: 212 GTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
G ++D W +G + E++ GR P + NQ E E I +
Sbjct: 330 GRAVDWWGLGVVMYEMMCGRLPFY------NQ----------DHEKLFELI-------LM 366
Query: 271 KSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRIT-----VTEALQHPYISGL--- 322
+ + + R +L P+A L LL+K +P +R+ E +QH + +G+
Sbjct: 367 EEIRFPR-----TLGPEAKSLLSGLLKK----DPKQRLGGGSEDAKEIMQHRFFAGIVWQ 417
Query: 323 --YDPQCNPPAQVPLSLDID 340
Y+ + +PP + ++ + D
Sbjct: 418 HVYEKKLSPPFKPQVTSETD 437
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 135/289 (46%), Gaps = 36/289 (12%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
KY + IG+GA G V ++++ T ++VAI+++N + + + E++++R K+ N
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 78
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
++ D + ++++V E + + + + + L+ L++LH
Sbjct: 79 IVNYLD-----SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
S ++HRD+K N+L+ + +K+ DFG + + V T ++ APE ++
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE-VVTRKA 192
Query: 211 YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
YG +D+WS+G + E++ +P + L L L I+ GT + + NP+
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL-IATNGTPE------LQNPE----- 240
Query: 271 KSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+S+++ D L + L + KR + E LQH ++
Sbjct: 241 ---------KLSAIF-------RDFLNRCLEMDVEKRGSAKELLQHQFL 273
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 74 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + TE T Y PE++ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--TELCGTLDYLPPEMIE-GRMH 183
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 214
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 215 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 137/303 (45%), Gaps = 51/303 (16%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIK 87
ID ++ + +G GA+G V R + + IK IN +++ + E+ +L+ +
Sbjct: 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKD-RSQVPMEQIEAEIEVLKSLD 78
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMDT----DLHQIIKSSQS----LSNDHCKYFV 139
H N+I + +V F+D + +Y +M+T +L + I S+Q+ LS + +
Sbjct: 79 HPNIIKIFEV--------FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELM 130
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLL---VNANCDLKICDFGLARTSRGNEQFMTEYVVT 196
Q++ L Y HS +++H+DLKP N+L + + +KI DFGLA + +E T T
Sbjct: 131 KQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH-STNAAGT 189
Query: 197 RWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEA 256
Y APE+ + D+WS G + +L F GT S+ QQ+A
Sbjct: 190 ALYMAPEVF--KRDVTFKCDIWSAGVVMYFLLTGCLPFTGT----------SLEEVQQKA 237
Query: 257 DLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQH 316
Y + P P A+DLL++ML +P +R + + L H
Sbjct: 238 -----------------TYKEPNYAVECRPLT-PQAVDLLKQMLTKDPERRPSAAQVLHH 279
Query: 317 PYI 319
+
Sbjct: 280 EWF 282
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 135/289 (46%), Gaps = 36/289 (12%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
KY + IG+GA G V ++++ T ++VAI+++N + + + E++++R K+ N
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 78
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
++ D + ++++V E + + + + + L+ L++LH
Sbjct: 79 IVNYLD-----SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
S ++HRD+K N+L+ + +K+ DFG + + V T ++ APE ++
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE-VVTRKA 192
Query: 211 YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
YG +D+WS+G + E++ +P + L L L I+ GT + + NP+
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL-IATNGTPE------LQNPE----- 240
Query: 271 KSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+S+++ D L + L + KR + E LQH ++
Sbjct: 241 ---------KLSAIF-------RDFLNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 140/324 (43%), Gaps = 51/324 (15%)
Query: 27 EIDTKYVPIKPIGRGAYGVV--CSSINRETNEKVAIKKINNVFENRI-DALRTLR----- 78
+I Y ++ +G GAYG V C N + + + + K + + R D + +
Sbjct: 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEE 92
Query: 79 ---ELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDH 134
E+ LL+ + H N+I L DV K YLV E + +L + I +
Sbjct: 93 IYNEISLLKSLDHPNIIKLFDVFEDK-----KYFYLVTEFYEGGELFEQIINRHKFDECD 147
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLV---NANCDLKICDFGLARTSRGNEQFMT 191
+ Q+L G+ YLH NI+HRD+KP N+L+ N+ ++KI DFGL+ + + +
Sbjct: 148 AANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LR 206
Query: 192 EYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFG 251
+ + T +Y APE+L Y DVWS G I +L P P FG
Sbjct: 207 DRLGTAYYIAPEVLK--KKYNEKCDVWSCGVIMYILLCGYP--P--------------FG 248
Query: 252 TQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVT 311
Q + D+ IK + + + + A +L++ ML ++ +KR T
Sbjct: 249 GQNDQDI-----------IKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAE 297
Query: 312 EALQHPYISGLYDPQCNPPAQVPL 335
EAL +I Y N Q L
Sbjct: 298 EALNSRWIKK-YANNINKSDQKTL 320
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 117/248 (47%), Gaps = 32/248 (12%)
Query: 34 PIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLREL-VLLRHIKHDNVI 92
PI +GRGAYGVV + + + +A+K+I N + R L +L + +R + +
Sbjct: 11 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATV-NSQEQKRLLMDLDISMRTVDCPFTV 69
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDL----HQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
+ DV++ ELMDT L Q+I Q++ D +++ L++
Sbjct: 70 TFYGALFREG-----DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 124
Query: 149 LHSA-NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVT------RWYRA 201
LHS +++HRD+KP N+L+NA +K+CDFG++ ++ + V + Y A
Sbjct: 125 LHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS-------GYLVDDVAKDIDAGCKPYMA 177
Query: 202 PELL---LCCDNYGTSIDVWSVGCIFAEI-LGRKPIFPGTECLNQLKLIISVFGTQQEAD 257
PE + L Y D+WS+G E+ + R P QLK ++ Q AD
Sbjct: 178 PERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPAD 237
Query: 258 ---LEFID 262
EF+D
Sbjct: 238 KFSAEFVD 245
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 135/289 (46%), Gaps = 36/289 (12%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
KY + IG+GA G V ++++ T ++VAI+++N + + + E++++R K+ N
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 79
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
++ D + ++++V E + + + + + L+ L++LH
Sbjct: 80 IVNYLD-----SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
S ++HRD+K N+L+ + +K+ DFG + + V T ++ APE ++
Sbjct: 135 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPE-VVTRKA 193
Query: 211 YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
YG +D+WS+G + E++ +P + L L L I+ GT + + NP+
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL-IATNGTPE------LQNPE----- 241
Query: 271 KSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+S+++ D L + L + KR + E +QH ++
Sbjct: 242 ---------KLSAIF-------RDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 138/301 (45%), Gaps = 41/301 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y +K IG+G + V + + T ++VA+K I+ N + RE+ +++ + H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+ L +V+ K +YLV E ++ + + + + Q++ ++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEYVVTRWYRAPELLLCCD 209
I+HRDLK NLL++A+ ++KI DFG + + GN+ + + + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKK 188
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
G +DVWS+G I ++ F G + L +L+ R
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR----------------------ERV 225
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS-GLYDPQCN 328
+ RG + Y D +LL+K L+ PSKR T+ + ++ +++ G D +
Sbjct: 226 L------RGKYRIPFYMSTD--CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELK 277
Query: 329 P 329
P
Sbjct: 278 P 278
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 126/291 (43%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + R++ +A+K + + LR E+ + H++H N++ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLS---NDHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 78 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ +N +LKI DFG + + + + T T Y PE ++ +
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR--TTLCGTLDYLPPE-MIEGRMH 187
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L P F T QE
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPPFEAH--------------TYQET--------------- 218
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L S+R+T+ E L+HP+I
Sbjct: 219 ---YRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKA 266
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 74 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T+ T Y PE++ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--TDLCGTLDYLPPEMIE-GRMH 183
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 214
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 215 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 138/301 (45%), Gaps = 41/301 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y +K IG+G + V + + T ++VA+K I+ N + RE+ +++ + H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+ L +V+ K +YLV E ++ + + + + Q++ ++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEYVVTRWYRAPELLLCCD 209
I+HRDLK NLL++A+ ++KI DFG + + GN+ + + + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKK 188
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
G +DVWS+G I ++ F G + L +L+ R
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR----------------------ERV 225
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS-GLYDPQCN 328
+ RG + Y D +LL+K L+ PSKR T+ + ++ +++ G D +
Sbjct: 226 L------RGKYRIPFYMSTD--CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELK 277
Query: 329 P 329
P
Sbjct: 278 P 278
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 74 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T+ T Y PE++ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--TDLCGTLDYLPPEMIE-GRMH 183
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 214
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 215 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 75 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T+ T Y PE++ +
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--TDLCGTLDYLPPEMIE-GRMH 184
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 215
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 216 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 79 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T+ T Y PE++ +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--TDLCGTLDYLPPEMIE-GRMH 188
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 219
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 220 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 131/289 (45%), Gaps = 44/289 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ +G G+YG V +I++ET + VAIK++ D ++E+ +++ +V+
Sbjct: 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQV----PVESDLQEIIKEISIMQQCDSPHVVKY 89
Query: 95 KDVMMPTHRISFK--DVYLVYELMDT-DLHQIIK-SSQSLSNDHCKYFVFQLLRGLKYLH 150
+ FK D+++V E + II+ +++L+ D + L+GL+YLH
Sbjct: 90 -------YGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH 142
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
+HRD+K GN+L+N K+ DFG+A + T ++ APE++
Sbjct: 143 FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEI-G 201
Query: 211 YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
Y D+WS+G E+ KP + + + +I + NP
Sbjct: 202 YNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT--------------NPP----- 242
Query: 271 KSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
P R + S D D +++ LV P +R T T+ LQHP++
Sbjct: 243 ---PTFRKPELWS-----DNFT-DFVKQCLVKSPEQRATATQLLQHPFV 282
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 137/301 (45%), Gaps = 41/301 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y +K IG+G + V + + T ++VA+K I+ N + RE+ +++ + H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+ L +V+ K +YLV E ++ + + + + Q++ ++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEYVVTRWYRAPELLLCCD 209
I+HRDLK NLL++A+ ++KI DFG + + GN+ + + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPELFQGKK 188
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
G +DVWS+G I ++ F G + L +L+ R
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR----------------------ERV 225
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS-GLYDPQCN 328
+ RG + Y D +LL+K L+ PSKR T+ + ++ +++ G D +
Sbjct: 226 L------RGKYRIPFYMSTD--CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELK 277
Query: 329 P 329
P
Sbjct: 278 P 278
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 15/225 (6%)
Query: 3 TLVEPPNGMKSRGKHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIK- 61
L EPP ++ G + E KY + P+G GA+G V +++++E N++V +K
Sbjct: 2 ALEEPPKAVELEG-----LAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKF 56
Query: 62 -KINNVFEN----RIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELM 116
K V E+ + E+ +L ++H N+I + D+ F + +
Sbjct: 57 IKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF---ENQGFFQLVMEKHGS 113
Query: 117 DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICD 176
DL I L Y QL+ + YL +I+HRD+K N+++ + +K+ D
Sbjct: 114 GLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLID 173
Query: 177 FGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVG 221
FG A + F T + T Y APE+L+ G +++WS+G
Sbjct: 174 FGSAAYLERGKLFYT-FCGTIEYCAPEVLMGNPYRGPELEMWSLG 217
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 24 TLFEIDTKYVPIKPI-GRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+L ID K + ++ + GRGA+GVVC + R + VAIK+I + E + + EL
Sbjct: 2 SLHMIDYKEIEVEEVVGRGAFGVVCKAKWRAKD--VAIKQIESESERKA----FIVELRQ 55
Query: 83 LRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSL---SNDHCKYF 138
L + H N++ L + V LV E + L+ ++ ++ L + H +
Sbjct: 56 LSRVNHPNIVKL-------YGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 108
Query: 139 VFQLLRGLKYLHSAN---ILHRDLKPGN-LLVNANCDLKICDFGLARTSRGNEQFMTEYV 194
Q +G+ YLHS ++HRDLKP N LLV LKICDFG T+ + MT
Sbjct: 109 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG---TACDIQTHMTNNK 165
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIF 234
+ + APE+ NY DV+S G I E++ R+ F
Sbjct: 166 GSAAWMAPEVFE-GSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E ++ K Q LS ++ +L L Y HS
Sbjct: 79 YGYFHDATR-----VYLILEYAPRG--EVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T T Y PE++ +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--TTLCGTLDYLPPEMIE-GRMH 188
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 219
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 220 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 72
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 73 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 125
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T T Y PE ++ +
Sbjct: 126 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--TTLCGTLDYLPPE-MIEGRMH 182
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 183 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 213
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 214 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 261
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 128/287 (44%), Gaps = 40/287 (13%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G +G V T K+A K I D E+ ++ + H N+I L D
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKT--RGMKDKEEVKNEISVMNQLDHANLIQLYDA 154
Query: 98 MMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANIL 155
S D+ LV E +D +II S +L+ F+ Q+ G++++H IL
Sbjct: 155 FE-----SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYIL 209
Query: 156 HRDLKPGNLL-VNANC-DLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGT 213
H DLKP N+L VN + +KI DFGLAR + E+ + T + APE ++ D
Sbjct: 210 HLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF-GTPEFLAPE-VVNYDFVSF 267
Query: 214 SIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSL 273
D+WSVG I +L F G L I++ ++ + + I + +A+ FI
Sbjct: 268 PTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDI-SEEAKEFI--- 323
Query: 274 PYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS 320
K+L+ E S RI+ +EAL+HP++S
Sbjct: 324 -----------------------SKLLIKEKSWRISASEALKHPWLS 347
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 138/301 (45%), Gaps = 41/301 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y +K IG+G + V + + T ++VA+K I+ N + RE+ +++ + H N+
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+ L +V+ K +YLV E ++ + + + + Q++ ++Y H
Sbjct: 69 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCH 123
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEYVVTRWYRAPELLLCCD 209
I+HRDLK NLL++A+ ++KI DFG + + GN+ + + + Y APEL
Sbjct: 124 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKK 181
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
G +DVWS+G I ++ F G + L +L+ R
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR----------------------ERV 218
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS-GLYDPQCN 328
+ RG + Y D +LL+K L+ PSKR T+ + ++ +++ G D +
Sbjct: 219 L------RGKYRIPFYMSTD--CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELK 270
Query: 329 P 329
P
Sbjct: 271 P 271
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 74 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T T Y PE ++ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--TXLCGTLDYLPPE-MIEGRMH 183
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 214
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 215 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 138/301 (45%), Gaps = 41/301 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y +K IG+G + V + + T ++VA++ I+ N + RE+ +++ + H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+ L +V+ K +YLV E ++ + + + + Q++ ++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEYVVTRWYRAPELLLCCD 209
I+HRDLK NLL++A+ ++KI DFG + + GN+ + + + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFCGSPPYAAPELFQGKK 188
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
G +DVWS+G I ++ F G + L +L+ R
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR----------------------ERV 225
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS-GLYDPQCN 328
+ RG + Y D +LL+K L+ PSKR T+ + ++ +++ G D +
Sbjct: 226 L------RGKYRIPFYMSTD--CENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDELK 277
Query: 329 P 329
P
Sbjct: 278 P 278
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 20/214 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIK----KINNVFENRIDALRTLRELVLLR 84
D + I +G G GVV +R + +A K +I N+I +REL +L
Sbjct: 15 DDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQI-----IRELQVLH 69
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLL 143
++ IS + E MD L Q++K ++ + + +L
Sbjct: 70 ECNSPYIVGFYGAFYSDGEIS-----ICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVL 124
Query: 144 RGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
RGL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + + + +V TR Y AP
Sbjct: 125 RGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMAP 182
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEI-LGRKPIFP 235
E L +Y D+WS+G E+ +GR PI P
Sbjct: 183 ERLQGT-HYSVQSDIWSMGLSLVELAVGRYPIPP 215
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 77 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T T Y PE ++ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--TTLCGTLDYLPPE-MIEGRMH 186
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 217
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 218 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 98
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 99 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 213
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 214 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPAAFFPKAR-- 265
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 266 ------------------------DLVEKLLVLDATKRLGCEE 284
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 108/220 (49%), Gaps = 26/220 (11%)
Query: 24 TLFEIDTKYVPIKPI-GRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL 82
+L ID K + ++ + GRGA+GVVC + R + VAIK+I + E + + EL
Sbjct: 1 SLHMIDYKEIEVEEVVGRGAFGVVCKAKWRAKD--VAIKQIESESERKA----FIVELRQ 54
Query: 83 LRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSL---SNDHCKYF 138
L + H N++ L + V LV E + L+ ++ ++ L + H +
Sbjct: 55 LSRVNHPNIVKL-------YGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW 107
Query: 139 VFQLLRGLKYLHSAN---ILHRDLKPGN-LLVNANCDLKICDFGLARTSRGNEQFMTEYV 194
Q +G+ YLHS ++HRDLKP N LLV LKICDFG T+ + MT
Sbjct: 108 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG---TACDIQTHMTNNK 164
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIF 234
+ + APE+ NY DV+S G I E++ R+ F
Sbjct: 165 GSAAWMAPEVFE-GSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 77 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T T Y PE++ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--TTLCGTLDYLPPEMIE-GRMH 186
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 217
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 218 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 130/287 (45%), Gaps = 42/287 (14%)
Query: 41 GAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMP 100
G +G V + N+ET+ A K I+ E ++ + E+ +L H N++ L D
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY--MVEIDILASCDHPNIVKLLDAFYY 78
Query: 101 THRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLK 160
+ + + +D + ++ + L+ + Q L L YLH I+HRDLK
Sbjct: 79 ENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLK 135
Query: 161 PGNLLVNANCDLKICDFGL-ARTSRGNEQFMTEYVVTRWYRAPELLLCCDN----YGTSI 215
GN+L + D+K+ DFG+ A+ +R Q ++ T ++ APE+++C + Y
Sbjct: 136 AGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA 195
Query: 216 DVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLP- 274
DVWS+G E+ +P P E LN +++++ + KS P
Sbjct: 196 DVWSLGITLIEMAEIEP--PHHE-LNPMRVLLKI--------------------AKSEPP 232
Query: 275 -YSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS 320
++ + SS + D L+K L R T ++ LQHP+++
Sbjct: 233 TLAQPSRWSSNFK-------DFLKKCLEKNVDARWTTSQLLQHPFVT 272
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK IG G++G V + ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 46 IKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ S H +++ Q++ +YL
Sbjct: 106 LE--------FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +K+ DFG A+ +G + T Y APE++L
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 213
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFV 95
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 210
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 211 AXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII------KLEYDFPEKFFPKAR-- 262
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 263 ------------------------DLVEKLLVLDATKRLGCEE 281
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 78 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 130
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T T Y PE ++ +
Sbjct: 131 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--TTLCGTLDYLPPE-MIEGRMH 187
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 188 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 218
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 219 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 266
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 100 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T T Y PE++ +
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--TTLCGTLDYLPPEMIE-GRMH 209
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 240
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 241 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 288
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 74 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T T Y PE++ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--TTLCGTLDYLPPEMIE-GRMH 183
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 214
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 215 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 128/290 (44%), Gaps = 39/290 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDAL-RTLRELVLLRHIKHDN 90
Y+ +G G +G V + T KVA+K +N +D + + RE+ L+ +H +
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
+I L V+ + D+++V E + +L I + L + Q+L G+ Y
Sbjct: 78 IIKLYQVIS-----TPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYC 132
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
H ++HRDLKP N+L++A+ + KI DFGL+ E F+ + Y APE++
Sbjct: 133 HRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-FLRXSCGSPNYAAPEVISGRL 191
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
G +D+WS G I +L C GT L F D+ F
Sbjct: 192 YAGPEVDIWSSGVILYALL----------C-----------GT-----LPFDDDHVPTLF 225
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
K G + Y +P + LL+ ML +P KR T+ + +H +
Sbjct: 226 KK---ICDGIFYTPQY--LNPSVISLLKHMLQVDPMKRATIKDIREHEWF 270
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 91 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 143
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T T Y PE++ +
Sbjct: 144 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--TTLCGTLDYLPPEMIE-GRMH 200
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 201 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 231
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 232 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 279
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 79 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T T Y PE++ +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--TTLCGTLDYLPPEMIE-GRMH 188
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 219
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 220 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 135/289 (46%), Gaps = 36/289 (12%)
Query: 31 KYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
KY + IG+GA G V ++++ T ++VAI+++N + + + E++++R K+ N
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 79
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
++ D + ++++V E + + + + + L+ L++LH
Sbjct: 80 IVNYLD-----SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
S ++HR++K N+L+ + +K+ DFG + + V T ++ APE ++
Sbjct: 135 SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPE-VVTRKA 193
Query: 211 YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
YG +D+WS+G + E++ +P + L L L I+ GT + + NP+
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL-IATNGTPE------LQNPE----- 241
Query: 271 KSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+S+++ D L + L + KR + E +QH ++
Sbjct: 242 ---------KLSAIF-------RDFLNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 126/294 (42%), Gaps = 53/294 (18%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 75 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGL---ARTSRGNEQFMTEYVVTRWYRAPELLLCC 208
++HRD+KP NLL+ + +LKI DFG A +SR T T Y PE ++
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR-----RTTLSGTLDYLPPE-MIEG 181
Query: 209 DNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +D+WS+G + E L KP F T QE
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET------------ 215
Query: 269 FIKSLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 216 ------YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V ++ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 94 LKDVMMPTHRISFKDVYLVYELMD----TDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y +M+ ++ ++ S H +++ Q++ +YL
Sbjct: 107 LE--------FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NL+++ +K+ DFG A+ +G + T Y APE++L
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 214
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 117/245 (47%), Gaps = 31/245 (12%)
Query: 30 TKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD 89
+ + I +G+GA+G V + N + AIKKI + E ++ + L E+ LL + H
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTI--LSEVXLLASLNHQ 62
Query: 90 NVIAL-------KDVMMPTHRISFKDVYLVYELM--DTDLHQIIKSSQSLSNDHCKYFVF 140
V+ ++ + P + K + + L+ +I S++L+ +Y+
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLI-HSENLNQQRDEYWRL 121
Query: 141 --QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSR-------------- 184
Q+L L Y+HS I+HR+LKP N+ ++ + ++KI DFGLA+
Sbjct: 122 FRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 185 GNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLK 244
G+ +T + T Y A E+L +Y ID +S+G IF E + P G E +N LK
Sbjct: 182 GSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI--YPFSTGXERVNILK 239
Query: 245 LIISV 249
+ SV
Sbjct: 240 KLRSV 244
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 125/291 (42%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E ++ K Q LS ++ +L L Y HS
Sbjct: 79 YGYFHDATR-----VYLILEYAPRG--EVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + + Y PE ++ +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLD--YLPPE-MIEGRMH 188
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 219
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 220 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 267
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFV 95
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 210
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII------KLEYDFPEKFFPKAR-- 262
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 263 ------------------------DLVEKLLVLDATKRLGCEE 281
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 141/321 (43%), Gaps = 64/321 (19%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKIN-NVFENRIDALRTLRELVLLRHIKHDNVIAL 94
K +G+G++G V + ++TN+ AIK + +V D T+ E +L +A
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS-------LAW 76
Query: 95 KDVMMPTHRISFK---DVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+ + +F+ +++ V E ++ DL I+S ++ +++ GL++LH
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 136
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
S I++RDLK N+L++ + +KI DFG+ + + + E+ T Y APE+LL
Sbjct: 137 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLG-QK 195
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEF---IDNPKA 266
Y S+D WS G + E+L G+ P F Q E +L +DNP
Sbjct: 196 YNHSVDWWSFGVLLYEMLIGQSP-----------------FHGQDEEELFHSIRMDNP-- 236
Query: 267 RRFIKSLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEAL-QHPYISGL-- 322
YP+ + A DLL K+ V EP KR+ V + QHP +
Sbjct: 237 -----------------FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINW 279
Query: 323 -------YDPQCNPPAQVPLS 336
DP P + P
Sbjct: 280 EELERKEIDPPFRPKVKSPFD 300
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 119/254 (46%), Gaps = 26/254 (10%)
Query: 12 KSRGKHYYTMWQTLFEI-DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIK----KINNV 66
+ R + + T Q + E+ D + I +G G GVV ++ + +A K +I
Sbjct: 49 RKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA 108
Query: 67 FENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIK 125
N+I +REL +L ++ IS + E MD L Q++K
Sbjct: 109 IRNQI-----IRELQVLHECNSPYIVGFYGAFYSDGEIS-----ICMEHMDGGSLDQVLK 158
Query: 126 SSQSLSNDHCKYFVFQLLRGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSR 184
+ + +++GL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + +
Sbjct: 159 KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQ 216
Query: 185 GNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI-LGRKPIFPGTECLNQL 243
+ +V TR Y +PE L +Y D+WS+G E+ +GR PI P +L
Sbjct: 217 LIDSMANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPPPDA--KEL 273
Query: 244 KLIISVFGTQQEAD 257
+L+ FG Q E D
Sbjct: 274 ELM---FGCQVEGD 284
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 53/294 (18%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 100 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGL---ARTSRGNEQFMTEYVVTRWYRAPELLLCC 208
++HRD+KP NLL+ + +LKI DFG A +SR + + T Y PE++
Sbjct: 153 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD-----DLCGTLDYLPPEMIE-G 206
Query: 209 DNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +D+WS+G + E L KP F T QE
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET------------ 240
Query: 269 FIKSLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 241 ------YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 288
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 126/291 (43%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 77 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + + T Y PE ++ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--DDLCGTLDYLPPE-MIEGRMH 186
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 217
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 218 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 125/291 (42%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + ++ +A+K + + LR E+ + H++H N++ L
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 70
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 71 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 123
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T T Y PE ++ +
Sbjct: 124 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--TTLCGTLDYLPPE-MIEGRMH 180
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 211
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 212 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 259
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V + ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVK 105
Query: 94 LKDVMMPTHRISFKDVYLVYELMD----TDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y +M+ ++ ++ S H +++ Q++ +YL
Sbjct: 106 LE--------FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NL+++ +K+ DFGLA+ +G + T Y APE++L
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCG---TPEYLAPEIIL-SK 213
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 111/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V ++ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 67 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 126
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ S H +++ Q++ +YL
Sbjct: 127 LE--------FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 178
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 234
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 235 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 273
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 111/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V ++ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ S H +++ Q++ +YL
Sbjct: 107 LE--------FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 214
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 92
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE-LLTEKS 207
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPEKFFPKAR-- 259
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 260 ------------------------DLVEKLLVLDATKRLGCEE 278
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFV 96
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE-LLTEKS 211
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPEKFFPKAR-- 263
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 264 ------------------------DLVEKLLVLDATKRLGCEE 282
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 125/291 (42%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 79 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T T Y PE + +
Sbjct: 132 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--TTLCGTLDYLPPEXIE-GRXH 188
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 219
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 220 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWITA 267
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 111/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V ++ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ S H +++ Q++ +YL
Sbjct: 107 LE--------FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 214
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 111/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V ++ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ S H +++ Q++ +YL
Sbjct: 107 LE--------FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 214
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 125/291 (42%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + R++ +A+K + + LR E+ + H++H N++ L
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLS---NDHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 78 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ +N +LKI DFG + + + + T Y PE ++ +
Sbjct: 131 KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR--DTLCGTLDYLPPE-MIEGRMH 187
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L P F T QE
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPPFEAH--------------TYQET--------------- 218
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L S+R+T+ E L+HP+I
Sbjct: 219 ---YRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKA 266
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFV 73
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 74 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 188
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 189 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPEKFFPKAR-- 240
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 241 ------------------------DLVEKLLVLDATKRLGCEE 259
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFV 95
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 210
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPEKFFPKAR-- 262
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 263 ------------------------DLVEKLLVLDATKRLGCEE 281
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 120/238 (50%), Gaps = 18/238 (7%)
Query: 16 KHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR 75
K + T Q ++D ++ IK +G G++G V ++E+ A+K ++ ++ +
Sbjct: 28 KKWETPSQNTAQLD-QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 76 -TLRELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSL 130
TL E +L+ + ++ L+ SFKD +Y+V E + ++ ++
Sbjct: 87 HTLNEKRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
S H +++ Q++ +YLHS ++++RDLKP NLL++ +++ DFG A+ +G +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
T Y APE++L Y ++D W++G + E+ P F E + + I+S
Sbjct: 199 CG---TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVS 252
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFV 72
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 73 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 187
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 188 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPEKFFPKAR-- 239
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 240 ------------------------DLVEKLLVLDATKRLGCEE 258
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 139/298 (46%), Gaps = 43/298 (14%)
Query: 27 EIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHI 86
E+ KY+ + +GRG +G+V + +++K + K V D + +E+ +L
Sbjct: 2 ELYEKYMIAEDLGRGEFGIVHRCVE-TSSKKTYMAKFVKV--KGTDQVLVKKEISILNIA 58
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQ-SLSNDHCKYFVFQLLR 144
+H N++ L + S +++ +++E + D+ + I +S L+ +V Q+
Sbjct: 59 RHRNILHLHESFE-----SMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCE 113
Query: 145 GLKYLHSANILHRDLKPGNLLVNA--NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
L++LHS NI H D++P N++ + +KI +FG AR + + F + +Y AP
Sbjct: 114 ALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYY-AP 172
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
E + D T+ D+WS+G + +L G P T NQ
Sbjct: 173 E-VHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET---NQ------------------- 209
Query: 262 DNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
+ I+++ + T + + A+D + ++LV E R+T +EALQHP++
Sbjct: 210 ------QIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWL 261
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFV 93
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPE-LLTEKS 208
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPEKFFPKAR-- 260
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 261 ------------------------DLVEKLLVLDATKRLGCEE 279
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFV 96
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 97 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 211
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 212 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPEKFFPKAR-- 263
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 264 ------------------------DLVEKLLVLDATKRLGCEE 282
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 109/219 (49%), Gaps = 13/219 (5%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTL-RELVLLRHI 86
I+ +Y + +G G V + + N KVAIK I + + L+ RE+ +
Sbjct: 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL 68
Query: 87 KHDNVIALKDVMMPTHRISFKD--VYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLL 143
H N++++ DV +D YLV E ++ L + I+S LS D F Q+L
Sbjct: 69 SHQNIVSMIDV-------DEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQIL 121
Query: 144 RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV-TRWYRAP 202
G+K+ H I+HRD+KP N+L+++N LKI DFG+A+ T +V+ T Y +P
Sbjct: 122 DGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSP 181
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLN 241
E + D++S+G + E+L +P F G ++
Sbjct: 182 E-QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS 219
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 111/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V ++ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 39 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 98
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ S H +++ Q++ +YL
Sbjct: 99 LE--------FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 150
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 206
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 207 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 245
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 92
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 93 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 207
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 208 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPEKFFPKAR-- 259
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 260 ------------------------DLVEKLLVLDATKRLGCEE 278
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 103/205 (50%), Gaps = 21/205 (10%)
Query: 38 IGRGAYGVVCSS--INRETNE-KVAIKKINNVFE-NRIDALRTLRELVLLRHIKHDNVIA 93
IG+G +GVV I++ N + AIK ++ + E +++A LRE +L+R + H NV+A
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAF--LREGLLMRGLNHPNVLA 86
Query: 94 LKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCK---YFVFQLLRGLKYLH 150
L +M+P V L Y + DL Q I+S Q N K F Q+ RG++YL
Sbjct: 87 LIGIMLPPE--GLPHVLLPY-MCHGDLLQFIRSPQR--NPTVKDLISFGLQVARGMEYLA 141
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
+HRDL N +++ + +K+ DFGLAR E + + R R P ++
Sbjct: 142 EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQ--HRHARLPVKWTALES 199
Query: 211 -----YGTSIDVWSVGCIFAEILGR 230
+ T DVWS G + E+L R
Sbjct: 200 LQTYRFTTKSDVWSFGVLLWELLTR 224
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFV 93
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 208
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPEKFFPKAR-- 260
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 261 ------------------------DLVEKLLVLDATKRLGCEE 279
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 119/254 (46%), Gaps = 26/254 (10%)
Query: 12 KSRGKHYYTMWQTLFEI-DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIK----KINNV 66
+ R + + T Q + E+ D + I +G G GVV ++ + +A K +I
Sbjct: 14 RKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA 73
Query: 67 FENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIK 125
N+I +REL +L ++ IS + E MD L Q++K
Sbjct: 74 IRNQI-----IRELQVLHECNSPYIVGFYGAFYSDGEIS-----ICMEHMDGGSLDQVLK 123
Query: 126 SSQSLSNDHCKYFVFQLLRGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSR 184
+ + +++GL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + +
Sbjct: 124 KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQ 181
Query: 185 GNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI-LGRKPIFPGTECLNQL 243
+ +V TR Y +PE L +Y D+WS+G E+ +GR PI P +L
Sbjct: 182 LIDSMANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPPPDA--KEL 238
Query: 244 KLIISVFGTQQEAD 257
+L+ FG Q E D
Sbjct: 239 ELM---FGCQVEGD 249
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 74 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T Y PE ++ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--AALCGTLDYLPPE-MIEGRMH 183
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 214
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 215 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFV 93
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 208
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPEKFFPKAR-- 260
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 261 ------------------------DLVEKLLVLDATKRLGCEE 279
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFV 95
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 210
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPEKFFPKAR-- 262
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 263 ------------------------DLVEKLLVLDATKRLGCEE 281
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 120/238 (50%), Gaps = 18/238 (7%)
Query: 16 KHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR 75
K + T Q ++D ++ IK +G G++G V ++E+ A+K ++ ++ +
Sbjct: 28 KKWETPSQNTAQLD-QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 76 -TLRELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSL 130
TL E +L+ + ++ L+ SFKD +Y+V E + ++ ++
Sbjct: 87 HTLNEKRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
S H +++ Q++ +YLHS ++++RDLKP NLL++ +++ DFG A+ +G +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
T Y APE++L Y ++D W++G + E+ P F + + + I+S
Sbjct: 199 AG---TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 95
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 210
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 211 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPEKFFPKAR-- 262
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 263 ------------------------DLVEKLLVLDATKRLGCEE 281
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFV 70
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 71 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 185
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 186 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPEKFFPKAR-- 237
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 238 ------------------------DLVEKLLVLDATKRLGCEE 256
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFV 71
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 72 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 186
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 187 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPEKFFPKAR-- 238
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 239 ------------------------DLVEKLLVLDATKRLGCEE 257
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 111/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V ++ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ S H +++ Q++ +YL
Sbjct: 106 LE--------YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 213
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 111/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V ++ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ S H +++ Q++ +YL
Sbjct: 106 LE--------YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 213
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 129/294 (43%), Gaps = 53/294 (18%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDAL----RTLRELVLLRHIKHDNV 91
+P+G+G +G V + RE N K I + +F+ +++ + RE+ + H++H N+
Sbjct: 14 RPLGKGKFGNVY--LAREKNSKF-ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNI 70
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKY 148
+ L + R VYL+ E L + + Q LS ++ +L L Y
Sbjct: 71 LRLYGYFHDSTR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSY 123
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCC 208
HS ++HRD+KP NLL+ + +LKI DFG + + + + T Y PE ++
Sbjct: 124 CHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--AALCGTLDYLPPE-MIEG 180
Query: 209 DNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
+ +D+WS+G + E L KP F T Q+
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQDT------------ 214
Query: 269 FIKSLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 215 ------YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 77
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 78 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 192
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 193 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPEKFFPKAR-- 244
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 245 ------------------------DLVEKLLVLDATKRLGCEE 263
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 111/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V ++ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ S H +++ Q++ +YL
Sbjct: 106 LE--------YSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 213
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 139/319 (43%), Gaps = 53/319 (16%)
Query: 12 KSRGKHYYTMWQTLFEI-DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIK----KINNV 66
+ R + + T Q + E+ D + I +G G GVV ++ + +A K +I
Sbjct: 6 RKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA 65
Query: 67 FENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIK 125
N+I +REL +L ++ IS + E MD L Q++K
Sbjct: 66 IRNQI-----IRELQVLHECNSPYIVGFYGAFYSDGEIS-----ICMEHMDGGSLDQVLK 115
Query: 126 SSQSLSNDHCKYFVFQLLRGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSR 184
+ + +++GL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + +
Sbjct: 116 KAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQ 173
Query: 185 GNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI-LGRKPIFPGTECLNQL 243
+ +V TR Y +PE L +Y D+WS+G E+ +GR PI G+ +
Sbjct: 174 LIDSMANSFVGTRSYMSPERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIF 232
Query: 244 KLIISVFGTQQEADLEFIDN---PKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKML 300
+L L++I N PK + SL + D + K L
Sbjct: 233 EL------------LDYIVNEPPPKLPSGVFSLEFQ-----------------DFVNKCL 263
Query: 301 VFEPSKRITVTEALQHPYI 319
+ P++R + + + H +I
Sbjct: 264 IKNPAERADLKQLMVHAFI 282
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 127/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT--RERDVMSRLDHPFFV 100
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 101 KLYFCFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 215
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 216 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPEKFFPKAR-- 267
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 268 ------------------------DLVEKLLVLDATKRLGCEE 286
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 137/312 (43%), Gaps = 39/312 (12%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y +K IG+G + V + + T +VAIK I+ N + RE+ +++ + H N+
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+ L +V+ K +YL+ E ++ + + + + Q++ ++Y H
Sbjct: 74 VKLFEVIETE-----KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 128
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLK NLL++A+ ++KI DFG + + T + + Y APEL
Sbjct: 129 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT-FCGSPPYAAPELFQGKKY 187
Query: 211 YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
G +DVWS+G I ++ F G + L +L+ R +
Sbjct: 188 DGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR----------------------ERVL 224
Query: 271 KSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPP 330
RG + Y D +LL++ LV P KR T+ + ++ +I+ ++ P
Sbjct: 225 ------RGKYRIPFYMSTD--CENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKP 276
Query: 331 AQVPLSLDIDEN 342
P LDI +
Sbjct: 277 FVEP-ELDISDQ 287
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 126/291 (43%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 77 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI +FG + + + + T T Y PE ++ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR--TTLCGTLDYLPPE-MIEGRMH 186
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 217
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 218 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 77 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T Y PE++ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--AALCGTLDYLPPEMIE-GRMH 186
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 217
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 218 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 120/238 (50%), Gaps = 18/238 (7%)
Query: 16 KHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR 75
K + T Q ++D ++ IK +G G++G V ++E+ A+K ++ ++ +
Sbjct: 28 KKWETPSQNTAQLD-QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 76 -TLRELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSL 130
TL E +L+ + ++ L+ SFKD +Y+V E + ++ ++
Sbjct: 87 HTLNEKRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
S H +++ Q++ +YLHS ++++RDLKP NLL++ +++ DFG A+ +G +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
T Y APE++L Y ++D W++G + E+ P F + + + I+S
Sbjct: 199 XG---TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 74 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T Y PE ++ +
Sbjct: 127 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--XXLCGTLDYLPPE-MIEGRMH 183
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 214
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 215 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 77 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T Y PE ++ +
Sbjct: 130 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--XXLCGTLDYLPPE-MIEGRMH 186
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 217
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 218 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 132/299 (44%), Gaps = 40/299 (13%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL-LRHI 86
ID V + +G G G V N+ T EK A+K + D + RE+ L R
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 66
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQII--KSSQSLSNDHCKYFVFQLL 143
+ +++ + DV + K + +V E +D +L I + Q+ + + +
Sbjct: 67 QCPHIVRIVDVYENLY-AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + + +TE T +Y
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTEPCYTPYYV 184
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEF 260
APE +L + Y S D+WS+G I +L P F L I T+
Sbjct: 185 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL----AISPGMKTRIRMGQYE 239
Query: 261 IDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
NP+ + + L++ +L EP++R+T+TE + HP+I
Sbjct: 240 FPNPE-------------------WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 104/203 (51%), Gaps = 9/203 (4%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKI-NNVFENRIDALRTLRELVLLRHIKHDNVIA 93
+K +G+G +G V + T A+K + V + + T+ E +L++ +H + A
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
LK R+ F V E + +L + + + + +++ +++ L+YLHS
Sbjct: 70 LKYAFQTHDRLCF-----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
++++RD+K NL+++ + +KI DFGL + + M + T Y APE+L D YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND-YG 183
Query: 213 TSIDVWSVGCIFAEIL-GRKPIF 234
++D W +G + E++ GR P +
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ V + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFV 95
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + L + I+ S +++ +++ L+YLH
Sbjct: 96 KLYFTFQDDEKLYFGLSYA----KNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE-LLTEKS 210
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 211 ASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPEKFFPKAR-- 262
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 263 ------------------------DLVEKLLVLDATKRLGCEE 281
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 104/203 (51%), Gaps = 9/203 (4%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKI-NNVFENRIDALRTLRELVLLRHIKHDNVIA 93
+K +G+G +G V + T A+K + V + + T+ E +L++ +H + A
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
LK R+ F V E + +L + + + + +++ +++ L+YLHS
Sbjct: 70 LKYAFQTHDRLCF-----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
++++RD+K NL+++ + +KI DFGL + + M + T Y APE+L D YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND-YG 183
Query: 213 TSIDVWSVGCIFAEIL-GRKPIF 234
++D W +G + E++ GR P +
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 104/203 (51%), Gaps = 9/203 (4%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKI-NNVFENRIDALRTLRELVLLRHIKHDNVIA 93
+K +G+G +G V + T A+K + V + + T+ E +L++ +H + A
Sbjct: 15 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 74
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
LK R+ F V E + +L + + + + +++ +++ L+YLHS
Sbjct: 75 LKYAFQTHDRLCF-----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 129
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
++++RD+K NL+++ + +KI DFGL + + M + T Y APE+L D YG
Sbjct: 130 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND-YG 188
Query: 213 TSIDVWSVGCIFAEIL-GRKPIF 234
++D W +G + E++ GR P +
Sbjct: 189 RAVDWWGLGVVMYEMMCGRLPFY 211
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 104/203 (51%), Gaps = 9/203 (4%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKI-NNVFENRIDALRTLRELVLLRHIKHDNVIA 93
+K +G+G +G V + T A+K + V + + T+ E +L++ +H + A
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
LK R+ F V E + +L + + + + +++ +++ L+YLHS
Sbjct: 70 LKYAFQTHDRLCF-----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
++++RD+K NL+++ + +KI DFGL + + M + T Y APE+L D YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND-YG 183
Query: 213 TSIDVWSVGCIFAEIL-GRKPIF 234
++D W +G + E++ GR P +
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 104/203 (51%), Gaps = 9/203 (4%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKI-NNVFENRIDALRTLRELVLLRHIKHDNVIA 93
+K +G+G +G V + T A+K + V + + T+ E +L++ +H + A
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
LK R+ F V E + +L + + + + +++ +++ L+YLHS
Sbjct: 70 LKYAFQTHDRLCF-----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
++++RD+K NL+++ + +KI DFGL + + M + T Y APE+L D YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDND-YG 183
Query: 213 TSIDVWSVGCIFAEIL-GRKPIF 234
++D W +G + E++ GR P +
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 120/238 (50%), Gaps = 18/238 (7%)
Query: 16 KHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR 75
K + T Q ++D ++ IK +G G++G V ++E+ A+K ++ ++ +
Sbjct: 28 KKWETPSQNTAQLD-QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 76 -TLRELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSL 130
TL E +L+ + ++ L+ SFKD +Y+V E + ++ ++
Sbjct: 87 HTLNEKRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
S H +++ Q++ +YLHS ++++RDLKP NLL++ +++ DFG A+ +G +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
T Y APE++L Y ++D W++G + E+ P F + + + I+S
Sbjct: 199 CG---TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 104/203 (51%), Gaps = 9/203 (4%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKI-NNVFENRIDALRTLRELVLLRHIKHDNVIA 93
+K +G+G +G V + T A+K + V + + T+ E +L++ +H + A
Sbjct: 13 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 72
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
LK R+ F V E + +L + + + + +++ +++ L+YLHS
Sbjct: 73 LKYAFQTHDRLCF-----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 127
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
++++RD+K NL+++ + +KI DFGL + + M + T Y APE+L D YG
Sbjct: 128 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND-YG 186
Query: 213 TSIDVWSVGCIFAEIL-GRKPIF 234
++D W +G + E++ GR P +
Sbjct: 187 RAVDWWGLGVVMYEMMCGRLPFY 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 126/291 (43%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 76 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI +FG + + + + T T Y PE++ +
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR--TTLCGTLDYLPPEMIE-GRMH 185
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 216
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 217 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 264
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 76 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T Y PE++ +
Sbjct: 129 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--XXLCGTLDYLPPEMIE-GRMH 185
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 216
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 217 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 264
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 111/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V ++E+ A+K ++ ++ + TL E +L+ + ++
Sbjct: 33 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 92
Query: 94 LKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ S H +++ Q++ +YL
Sbjct: 93 LE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 144
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 145 HSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 200
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 201 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 239
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 109/218 (50%), Gaps = 15/218 (6%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
I+ +G G++G V ++ET A+K ++ + ++ L+ + + + I+ A+
Sbjct: 47 IRTLGTGSFGRVMLVKHKETGNHYAMKILD---KQKVVKLKQIEHTLNEKRIQQ----AV 99
Query: 95 KDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+ SFKD +Y+V E ++ ++ S H +++ Q++ +YLH
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
S ++++RDLKP NLL++ +K+ DFG A+ +G + T Y APE++L
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SKG 215
Query: 211 YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V + ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVK 105
Query: 94 LKDVMMPTHRISFKDVYLVYELMD----TDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y +M+ ++ ++ S H +++ Q++ +YL
Sbjct: 106 LE--------FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NL+++ +++ DFGLA+ +G + T Y APE++L
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCG---TPEYLAPEIIL-SK 213
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 109/219 (49%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V + ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 94 LKDVMMPTHRISFKDVYLVYELMD----TDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y +M+ ++ ++ S H +++ Q++ +YL
Sbjct: 106 LE--------FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NL+++ +K+ DFG A+ +G + T Y APE++L
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 213
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 104/203 (51%), Gaps = 9/203 (4%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKI-NNVFENRIDALRTLRELVLLRHIKHDNVIA 93
+K +G+G +G V + T A+K + V + + T+ E +L++ +H + A
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTA 69
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
LK R+ F V E + +L + + + + +++ +++ L+YLHS
Sbjct: 70 LKYAFQTHDRLCF-----VMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
++++RD+K NL+++ + +KI DFGL + + M + T Y APE+L D YG
Sbjct: 125 DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND-YG 183
Query: 213 TSIDVWSVGCIFAEIL-GRKPIF 234
++D W +G + E++ GR P +
Sbjct: 184 RAVDWWGLGVVMYEMMCGRLPFY 206
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 120/238 (50%), Gaps = 18/238 (7%)
Query: 16 KHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR 75
K + T Q ++D ++ IK +G G++G V ++E+ A+K ++ ++ +
Sbjct: 28 KKWETPSQNTAQLD-QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 76 -TLRELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSL 130
TL E +L+ + ++ L+ SFKD +Y+V E + ++ ++
Sbjct: 87 HTLNEKRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
S H +++ Q++ +YLHS ++++RDLKP NLL++ +++ DFG A+ +G +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
T Y APE++L Y ++D W++G + E+ P F + + + I+S
Sbjct: 199 CG---TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 120/238 (50%), Gaps = 18/238 (7%)
Query: 16 KHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR 75
K + T Q ++D ++ IK +G G++G V ++E+ A+K ++ ++ +
Sbjct: 29 KKWETPSQNTAQLD-QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE 87
Query: 76 -TLRELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSL 130
TL E +L+ + ++ L+ SFKD +Y+V E + ++ ++
Sbjct: 88 HTLNEKRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 139
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
S H +++ Q++ +YLHS ++++RDLKP NLL++ +++ DFG A+ +G +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 199
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
T Y APE++L Y ++D W++G + E+ P F + + + I+S
Sbjct: 200 CG---TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 120/238 (50%), Gaps = 18/238 (7%)
Query: 16 KHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR 75
K + T Q ++D ++ IK +G G++G V ++E+ A+K ++ ++ +
Sbjct: 28 KKWETPSQNTAQLD-QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 76 -TLRELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSL 130
TL E +L+ + ++ L+ SFKD +Y+V E + ++ ++
Sbjct: 87 HTLNEKRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
S H +++ Q++ +YLHS ++++RDLKP NLL++ +++ DFG A+ +G +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
T Y APE++L Y ++D W++G + E+ P F + + + I+S
Sbjct: 199 CG---TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 125/291 (42%), Gaps = 47/291 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-ELVLLRHIKHDNVIAL 94
+P+G+G +G V + +++ +A+K + + LR E+ + H++H N++ L
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN---DHCKYFVFQLLRGLKYLHS 151
R VYL+ E L + + Q LS ++ +L L Y HS
Sbjct: 75 YGYFHDATR-----VYLILEY--APLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
++HRD+KP NLL+ + +LKI DFG + + + + T Y PE++ +
Sbjct: 128 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR--DTLCGTLDYLPPEMIE-GRMH 184
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+D+WS+G + E L KP F T QE
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEAN--------------TYQET--------------- 215
Query: 272 SLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
Y R + + +P A DL+ ++L PS+R + E L+HP+I+
Sbjct: 216 ---YKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 120/238 (50%), Gaps = 18/238 (7%)
Query: 16 KHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR 75
K + T Q ++D ++ IK +G G++G V ++E+ A+K ++ ++ +
Sbjct: 28 KKWETPSQNTAQLD-QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 76 -TLRELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSL 130
TL E +L+ + ++ L+ SFKD +Y+V E + ++ ++
Sbjct: 87 HTLNEKRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
S H +++ Q++ +YLHS ++++RDLKP NLL++ +++ DFG A+ +G +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
T Y APE++L Y ++D W++G + E+ P F + + + I+S
Sbjct: 199 CG---TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 25/223 (11%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKH--DNVI 92
IK +G G++G V + ET A+K ++ +++V L+ I+H +
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK------------QKVVKLKQIEHTLNEKR 94
Query: 93 ALKDVMMP---THRISFKDVYLVYELMD----TDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
L+ V P SFKD +Y +M+ ++ ++ S H +++ Q++
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL 205
+YLHS ++++RDLKP NL+++ +K+ DFG A+ +G + T Y APE++
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG---TPEYLAPEII 211
Query: 206 LCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
L Y ++D W++G + E+ P F + + + I+S
Sbjct: 212 L-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V + ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ S H +++ Q++ +YL
Sbjct: 106 LE--------FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 213
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 109/223 (48%), Gaps = 25/223 (11%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKH--DNVI 92
IK +G G++G V + ET A+K ++ +++V L+ I+H +
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK------------QKVVKLKQIEHTLNEKR 94
Query: 93 ALKDVMMP---THRISFKDVYLVYELMD----TDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
L+ V P SFKD +Y +M+ ++ ++ S H +++ Q++
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL 205
+YLHS ++++RDLKP NL+++ +K+ DFG A+ +G + T Y APE++
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG---TPEYLAPEII 211
Query: 206 LCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
L Y ++D W++G + E+ P F + + + I+S
Sbjct: 212 L-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V + ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 94 LKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ S H +++ Q++ +YL
Sbjct: 106 LE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 213
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 103/215 (47%), Gaps = 36/215 (16%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRT-LRELVLLRHIKHDNVIALKD 96
+G+G +G +RET E + +K++ E + RT L+E+ ++R ++H NV+
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDE---ETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 97 VMMPTHRISFKDVYLVYELMDTDLHQIIKS-------SQSLSNDHCKYFVFQLLRGLKYL 149
V+ R++F Y+ L IIKS SQ +S F + G+ YL
Sbjct: 75 VLYKDKRLNFITEYI----KGGTLRGIIKSMDSQYPWSQRVS------FAKDIASGMAYL 124
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLAR--------------TSRGNEQFMTEYVV 195
HS NI+HRDL N LV N ++ + DFGLAR + + + V
Sbjct: 125 HSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVG 184
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGR 230
++ APE ++ +Y +DV+S G + EI+GR
Sbjct: 185 NPYWMAPE-MINGRSYDEKVDVFSFGIVLCEIIGR 218
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V + ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ S H +++ Q++ +YL
Sbjct: 107 LE--------FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 214
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V + ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ S H +++ Q++ +YL
Sbjct: 106 LE--------FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 213
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V + ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ S H +++ Q++ +YL
Sbjct: 106 LE--------FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 213
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V + ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 32 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 91
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ S H +++ Q++ +YL
Sbjct: 92 LE--------FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 143
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 144 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCG---TPEYLAPEIIL-SK 199
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 200 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 238
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 120/238 (50%), Gaps = 18/238 (7%)
Query: 16 KHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR 75
K + T Q ++D ++ IK +G G++G V ++E+ A+K ++ ++ +
Sbjct: 49 KKWETPSQNTAQLD-QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE 107
Query: 76 -TLRELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSL 130
TL E +L+ + ++ L+ SFKD +Y+V E + ++ ++
Sbjct: 108 HTLNEKRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 159
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
S H +++ Q++ +YLHS ++++RDLKP NLL++ +++ DFG A+ +G +
Sbjct: 160 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTL 219
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
T Y APE++L Y ++D W++G + E+ P F + + + I+S
Sbjct: 220 CG---TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 273
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 126/283 (44%), Gaps = 45/283 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIK---KINNVFENRIDALRTLRELVLLRHIKHDNVI 92
K +G G++ + T+ + AIK K + + EN++ + RE ++ + H +
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYV--TRERDVMSRLDHPFFV 93
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
L ++ F Y + +L + I+ S +++ +++ L+YLH
Sbjct: 94 KLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
I+HRDLKP N+L+N + ++I DFG A+ + + +V T Y +PE LL +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LLTEKS 208
Query: 211 YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
S D+W++GCI +++ G P G E L K+I + E D PKAR
Sbjct: 209 ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII------KLEYDFPEKFFPKAR-- 260
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
DL++K+LV + +KR+ E
Sbjct: 261 ------------------------DLVEKLLVLDATKRLGCEE 279
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 111/247 (44%), Gaps = 30/247 (12%)
Query: 34 PIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIA 93
PI +GRGAYGVV + + + A+K+I N + R L +L I V
Sbjct: 38 PIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATV-NSQEQKRLLXDL----DISXRTVDC 92
Query: 94 LKDVMMPTHRISFKDVYLVYELMDTDL----HQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
V DV++ EL DT L Q+I Q++ D +++ L++L
Sbjct: 93 PFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 152
Query: 150 HSA-NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVT------RWYRAP 202
HS +++HRD+KP N+L+NA +K CDFG++ ++ + V + Y AP
Sbjct: 153 HSKLSVIHRDVKPSNVLINALGQVKXCDFGIS-------GYLVDDVAKDIDAGCKPYXAP 205
Query: 203 ELL---LCCDNYGTSIDVWSVGCIFAEI-LGRKPIFPGTECLNQLKLIISVFGTQQEAD- 257
E + L Y D+WS+G E+ + R P QLK ++ Q AD
Sbjct: 206 ERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADK 265
Query: 258 --LEFID 262
EF+D
Sbjct: 266 FSAEFVD 272
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V ++ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 39 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 98
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ H +++ Q++ +YL
Sbjct: 99 LE--------FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 150
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 206
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 207 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 245
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRT--LRELVLLRHIKHDNVIA 93
K IGRG + V + VA+KK+ +F+ R ++E+ LL+ + H NVI
Sbjct: 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQ-IFDLMDAKARADCIKEIDLLKQLNHPNVIK 96
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIK---SSQSLSNDHC--KYFVFQLLRGLK 147
+ + ++ +V EL D DL ++IK + L + KYFV QL L+
Sbjct: 97 YYASFIEDNELN-----IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV-QLCSALE 150
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLC 207
++HS ++HRD+KP N+ + A +K+ D GL R V T +Y +PE +
Sbjct: 151 HMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIH- 209
Query: 208 CDNYGTSIDVWSVGCIFAEILGRKPIFPG 236
+ Y D+WS+GC+ E+ + F G
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYG 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V + ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ S H +++ Q++ +YL
Sbjct: 107 LE--------FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCG---TPEYLAPEIIL-SK 214
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 137/314 (43%), Gaps = 43/314 (13%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y +K IG+G + V + + T +VAIK I+ N + RE+ +++ + H N+
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+ L +V+ K +YL+ E ++ + + + + Q++ ++Y H
Sbjct: 77 VKLFEVIETE-----KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 131
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLAR--TSRGNEQFMTEYVVTRWYRAPELLLCC 208
I+HRDLK NLL++A+ ++KI DFG + T G + + Y APEL
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK---LDAFCGAPPYAAPELFQGK 188
Query: 209 DNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
G +DVWS+G I ++ F G + L +L+ R
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR----------------------ER 225
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCN 328
+ RG + Y D +LL++ LV P KR T+ + ++ +I+ ++
Sbjct: 226 VL------RGKYRIPFYMSTD--CENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDEL 277
Query: 329 PPAQVPLSLDIDEN 342
P P LDI +
Sbjct: 278 KPFVEP-ELDISDQ 290
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 142/325 (43%), Gaps = 64/325 (19%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN-NVFENRIDALRTLRELVLLRHIKHDN 90
++ K +G+G++G V + ++TN+ AIK + +V D T+ E +L
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS------ 72
Query: 91 VIALKDVMMPTHRISFK---DVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGL 146
+A + + +F+ +++ V E ++ DL I+S ++ +++ GL
Sbjct: 73 -LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGL 131
Query: 147 KYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
++LHS I++RDLK N+L++ + +KI DFG+ + + + + T Y APE+LL
Sbjct: 132 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILL 191
Query: 207 CCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEF---ID 262
Y S+D WS G + E+L G+ P F Q E +L +D
Sbjct: 192 G-QKYNHSVDWWSFGVLLYEMLIGQSP-----------------FHGQDEEELFHSIRMD 233
Query: 263 NPKARRFIKSLPYSRGTHISSLYPQ-ADPLALDLLQKMLVFEPSKRITVTEAL-QHPYIS 320
NP YP+ + A DLL K+ V EP KR+ V + QHP
Sbjct: 234 NP-------------------FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFR 274
Query: 321 GL---------YDPQCNPPAQVPLS 336
+ DP P + P
Sbjct: 275 EINWEELERKEIDPPFRPKVKSPFD 299
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 120/238 (50%), Gaps = 18/238 (7%)
Query: 16 KHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR 75
K + T Q ++D ++ IK +G G++G V ++E+ A+K ++ ++ +
Sbjct: 28 KKWETPSQNTAQLD-QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 76 -TLRELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSL 130
TL E +L+ + ++ L+ SFKD +Y+V E + ++ ++
Sbjct: 87 HTLNEKRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
+ H +++ Q++ +YLHS ++++RDLKP NLL++ +++ DFG A+ +G +
Sbjct: 139 AEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
T Y APE++L Y ++D W++G + E+ P F + + + I+S
Sbjct: 199 CG---TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 25/236 (10%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIK----KINNVFENRIDALRTLRELVLLR 84
D + I +G G GVV ++ + +A K +I N+I +REL +L
Sbjct: 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI-----IRELQVLH 59
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLL 143
++ IS + E MD L Q++K + + ++
Sbjct: 60 ECNSPYIVGFYGAFYSDGEIS-----ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 114
Query: 144 RGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
+GL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + + + +V TR Y +P
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSP 172
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEI-LGRKPIFPGTECLNQLKLIISVFGTQQEAD 257
E L +Y D+WS+G E+ +GR PI P +L+L+ FG Q E D
Sbjct: 173 ERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPPPDA--KELELM---FGCQVEGD 222
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 130/299 (43%), Gaps = 40/299 (13%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL-LRHI 86
ID V + +G G G V N+ T EK A+K + D + RE+ L R
Sbjct: 21 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 73
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQII--KSSQSLSNDHCKYFVFQLL 143
+ +++ + DV + K + +V E +D +L I + Q+ + + +
Sbjct: 74 QCPHIVRIVDVYENLY-AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 132
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + + T T +Y
Sbjct: 133 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 191
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEF 260
APE +L + Y S D+WS+G I +L P F L I T+
Sbjct: 192 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL----AISPGMKTRIRMGQYE 246
Query: 261 IDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
NP+ + + L++ +L EP++R+T+TE + HP+I
Sbjct: 247 FPNPE-------------------WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 286
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 120/238 (50%), Gaps = 18/238 (7%)
Query: 16 KHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR 75
K + T Q ++D ++ IK +G G++G V ++E+ A+K ++ ++ +
Sbjct: 28 KKWETPSQNTAQLD-QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 76 -TLRELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSL 130
TL E +L+ + ++ L+ SFKD +Y+V E + ++ ++
Sbjct: 87 HTLNEKRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
S H +++ Q++ +YLHS ++++RDLKP NLL++ +++ DFG A+ +G +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
T Y APE++L Y ++D W++G + ++ P F + + + I+S
Sbjct: 199 CG---TPEYLAPEIIL-SKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVS 252
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 105/206 (50%), Gaps = 17/206 (8%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKIN-NVFENRIDALRTLRELVLLRHIKHDNVIA 93
++ IG+G++G VC +T + A+K +N R + +EL +++ ++H ++
Sbjct: 20 LRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVN 79
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L SF+D +++V +L+ DL ++ + + K F+ +L+ L YL
Sbjct: 80 L--------WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYL 131
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
+ I+HRD+KP N+L++ + + I DF +A Q +T T+ Y APE+
Sbjct: 132 QNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ-ITTMAGTKPYMAPEMFSSRK 190
Query: 210 NYGTS--IDVWSVGCIFAEIL-GRKP 232
G S +D WS+G E+L GR+P
Sbjct: 191 GAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 130/299 (43%), Gaps = 40/299 (13%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL-LRHI 86
ID V + +G G G V N+ T EK A+K + D + RE+ L R
Sbjct: 20 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 72
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQII--KSSQSLSNDHCKYFVFQLL 143
+ +++ + DV + K + +V E +D +L I + Q+ + + +
Sbjct: 73 QCPHIVRIVDVYENLY-AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 131
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + + T T +Y
Sbjct: 132 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 190
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEF 260
APE +L + Y S D+WS+G I +L P F L I T+
Sbjct: 191 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL----AISPGMKTRIRMGQYE 245
Query: 261 IDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
NP+ + + L++ +L EP++R+T+TE + HP+I
Sbjct: 246 FPNPE-------------------WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 285
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 109/219 (49%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V + ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 94 LKDVMMPTHRISFKDVYLVYELMD----TDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y +M+ ++ ++ S H +++ Q++ +YL
Sbjct: 106 LE--------FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NL+++ +++ DFG A+ +G + T Y APE++L
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 213
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 25/236 (10%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIK----KINNVFENRIDALRTLRELVLLR 84
D + I +G G GVV ++ + +A K +I N+I +REL +L
Sbjct: 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI-----IRELQVLH 59
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLL 143
++ IS + E MD L Q++K + + ++
Sbjct: 60 ECNSPYIVGFYGAFYSDGEIS-----ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 114
Query: 144 RGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
+GL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + + + +V TR Y +P
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSP 172
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEI-LGRKPIFPGTECLNQLKLIISVFGTQQEAD 257
E L +Y D+WS+G E+ +GR PI P +L+L+ FG Q E D
Sbjct: 173 ERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPPPDA--KELELM---FGCQVEGD 222
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 130/299 (43%), Gaps = 40/299 (13%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL-LRHI 86
ID V + +G G G V N+ T EK A+K + D + RE+ L R
Sbjct: 22 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 74
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQII--KSSQSLSNDHCKYFVFQLL 143
+ +++ + DV + K + +V E +D +L I + Q+ + + +
Sbjct: 75 QCPHIVRIVDVYENLY-AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 133
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + + T T +Y
Sbjct: 134 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 192
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEF 260
APE +L + Y S D+WS+G I +L P F L I T+
Sbjct: 193 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL----AISPGMKTRIRMGQYE 247
Query: 261 IDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
NP+ + + L++ +L EP++R+T+TE + HP+I
Sbjct: 248 FPNPE-------------------WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 287
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 119/238 (50%), Gaps = 18/238 (7%)
Query: 16 KHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR 75
K + T Q ++D ++ IK +G G++G V ++E+ A+K ++ ++ +
Sbjct: 49 KKWETPSQNTAQLD-QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE 107
Query: 76 -TLRELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSL 130
TL E +L+ + ++ L+ SFKD +Y+V E + ++ ++
Sbjct: 108 HTLNEKRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 159
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
H +++ Q++ +YLHS ++++RDLKP NLL++ +++ DFG A+ +G +
Sbjct: 160 XEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 219
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
T Y APE++L Y ++D W++G + E+ P F + + + I+S
Sbjct: 220 CG---TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 273
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 105/219 (47%), Gaps = 10/219 (4%)
Query: 35 IKPIGRGAYGVV--CSSINR-ETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
+K +G+G++G V + R ++ A+K + D +RT E +L + H V
Sbjct: 33 LKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFV 92
Query: 92 IALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+ L ++ YL+ + + DL + + + K+++ +L GL +LH
Sbjct: 93 VKLHYAFQTEGKL-----YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLH 147
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
S I++RDLKP N+L++ +K+ DFGL++ + +E+ + T Y APE ++
Sbjct: 148 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPE-VVNRQG 206
Query: 211 YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISV 249
+ S D WS G + E+L F G + + LI+
Sbjct: 207 HSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKA 245
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 130/299 (43%), Gaps = 40/299 (13%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL-LRHI 86
ID V + +G G G V N+ T EK A+K + D + RE+ L R
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 66
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQII--KSSQSLSNDHCKYFVFQLL 143
+ +++ + DV + K + +V E +D +L I + Q+ + + +
Sbjct: 67 QCPHIVRIVDVYENLY-AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + + T T +Y
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 184
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEF 260
APE +L + Y S D+WS+G I +L P F L I T+
Sbjct: 185 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL----AISPGMKTRIRMGQYE 239
Query: 261 IDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
NP+ + + L++ +L EP++R+T+TE + HP+I
Sbjct: 240 FPNPE-------------------WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 279
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 130/299 (43%), Gaps = 40/299 (13%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL-LRHI 86
ID V + +G G G V N+ T EK A+K + D + RE+ L R
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 68
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQII--KSSQSLSNDHCKYFVFQLL 143
+ +++ + DV + K + +V E +D +L I + Q+ + + +
Sbjct: 69 QCPHIVRIVDVYENLY-AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + + T T +Y
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 186
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEF 260
APE +L + Y S D+WS+G I +L P F L I T+
Sbjct: 187 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL----AISPGMKTRIRMGQYE 241
Query: 261 IDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
NP+ + + L++ +L EP++R+T+TE + HP+I
Sbjct: 242 FPNPE-------------------WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 40/283 (14%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
Y +K IG+G + V + + T ++VA+K I+ N + RE+ + + + H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+ L +V+ K +YLV E ++ + + + Q++ ++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCH 130
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEYVVTRWYRAPELLLCCD 209
I+HRDLK NLL++A+ ++KI DFG + + GN+ + + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDAFCGAPPYAAPELFQGKK 188
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRF 269
G +DVWS+G I ++ F G + L +L+ R
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR----------------------ERV 225
Query: 270 IKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE 312
+ RG + Y D +LL+K L+ PSKR T+ +
Sbjct: 226 L------RGKYRIPFYXSTD--CENLLKKFLILNPSKRGTLEQ 260
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 130/299 (43%), Gaps = 40/299 (13%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL-LRHI 86
ID V + +G G G V N+ T EK A+K + D + RE+ L R
Sbjct: 30 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 82
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQII--KSSQSLSNDHCKYFVFQLL 143
+ +++ + DV + K + +V E +D +L I + Q+ + + +
Sbjct: 83 QCPHIVRIVDVYENLY-AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 141
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + + T T +Y
Sbjct: 142 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 200
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEF 260
APE +L + Y S D+WS+G I +L P F L I T+
Sbjct: 201 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL----AISPGMKTRIRMGQYE 255
Query: 261 IDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
NP+ + + L++ +L EP++R+T+TE + HP+I
Sbjct: 256 FPNPE-------------------WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 295
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 130/299 (43%), Gaps = 40/299 (13%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL-LRHI 86
ID V + +G G G V N+ T EK A+K + D + RE+ L R
Sbjct: 15 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 67
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQII--KSSQSLSNDHCKYFVFQLL 143
+ +++ + DV + K + +V E +D +L I + Q+ + + +
Sbjct: 68 QCPHIVRIVDVYENLY-AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 126
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + + T T +Y
Sbjct: 127 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 185
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEF 260
APE +L + Y S D+WS+G I +L P F L I T+
Sbjct: 186 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL----AISPGMKTRIRMGQYE 240
Query: 261 IDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
NP+ + + L++ +L EP++R+T+TE + HP+I
Sbjct: 241 FPNPE-------------------WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 280
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 25/236 (10%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIK----KINNVFENRIDALRTLRELVLLR 84
D + I +G G GVV ++ + +A K +I N+I +REL +L
Sbjct: 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI-----IRELQVLH 59
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLL 143
++ IS + E MD L Q++K + + ++
Sbjct: 60 ECNSPYIVGFYGAFYSDGEIS-----ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 114
Query: 144 RGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
+GL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + + + +V TR Y +P
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSP 172
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEI-LGRKPIFPGTECLNQLKLIISVFGTQQEAD 257
E L +Y D+WS+G E+ +GR PI P +L+L+ FG Q E D
Sbjct: 173 ERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPPPDA--KELELM---FGCQVEGD 222
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 25/236 (10%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIK----KINNVFENRIDALRTLRELVLLR 84
D + I +G G GVV ++ + +A K +I N+I +REL +L
Sbjct: 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI-----IRELQVLH 59
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLL 143
++ IS + E MD L Q++K + + ++
Sbjct: 60 ECNSPYIVGFYGAFYSDGEIS-----ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 114
Query: 144 RGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
+GL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + + + +V TR Y +P
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSP 172
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEI-LGRKPIFPGTECLNQLKLIISVFGTQQEAD 257
E L +Y D+WS+G E+ +GR PI P +L+L+ FG Q E D
Sbjct: 173 ERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPIPPPDA--KELELM---FGCQVEGD 222
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 108/219 (49%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V + ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 94 LKDVMMPTHRISFKDVYLVYELMD----TDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y +M+ ++ ++ H +++ Q++ +YL
Sbjct: 106 LE--------FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NL+++ +K+ DFG A+ +G + T Y APE++L
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 213
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 130/299 (43%), Gaps = 40/299 (13%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL-LRHI 86
ID V + +G G G V N+ T EK A+K + D + RE+ L R
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 112
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQII--KSSQSLSNDHCKYFVFQLL 143
+ +++ + DV + K + +V E +D +L I + Q+ + + +
Sbjct: 113 QCPHIVRIVDVYENLY-AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 171
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + + T T +Y
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 230
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEF 260
APE +L + Y S D+WS+G I +L P F L I T+
Sbjct: 231 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL----AISPGMKTRIRMGQYE 285
Query: 261 IDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
NP+ + + L++ +L EP++R+T+TE + HP+I
Sbjct: 286 FPNPE-------------------WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 325
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 130/299 (43%), Gaps = 40/299 (13%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL-LRHI 86
ID V + +G G G V N+ T EK A+K + D + RE+ L R
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 68
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQII--KSSQSLSNDHCKYFVFQLL 143
+ +++ + DV + K + +V E +D +L I + Q+ + + +
Sbjct: 69 QCPHIVRIVDVYENLY-AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + + T T +Y
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 186
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEF 260
APE +L + Y S D+WS+G I +L P F L I T+
Sbjct: 187 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL----AISPGMKTRIRMGQYE 241
Query: 261 IDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
NP+ + + L++ +L EP++R+T+TE + HP+I
Sbjct: 242 FPNPE-------------------WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 281
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 119/238 (50%), Gaps = 18/238 (7%)
Query: 16 KHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR 75
K + T Q ++D ++ IK +G G++G V ++E+ A+K ++ ++ +
Sbjct: 28 KKWETPSQNTAQLD-QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 76 -TLRELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSL 130
TL E +L+ + ++ L+ SFKD +Y+V E + ++ ++
Sbjct: 87 HTLNEKRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
H +++ Q++ +YLHS ++++RDLKP NLL++ +++ DFG A+ +G +
Sbjct: 139 XEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
T Y APE++L Y ++D W++G + E+ P F + + + I+S
Sbjct: 199 CG---TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 119/238 (50%), Gaps = 18/238 (7%)
Query: 16 KHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR 75
K + T Q ++D ++ IK +G G++G V ++E+ A+K ++ ++ +
Sbjct: 28 KKWETPSQNTAQLD-QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 76 -TLRELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSL 130
TL E +L+ + ++ L+ SFKD +Y+V E + ++ ++
Sbjct: 87 HTLNEKRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
H +++ Q++ +YLHS ++++RDLKP NLL++ +++ DFG A+ +G +
Sbjct: 139 XEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
T Y APE++L Y ++D W++G + E+ P F + + + I+S
Sbjct: 199 CG---TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V ++E+ A+K ++ ++ + TL E +L+ + ++
Sbjct: 41 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 100
Query: 94 LKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ H +++ Q++ +YL
Sbjct: 101 LE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 152
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 153 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 208
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 209 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 247
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 108/223 (48%), Gaps = 25/223 (11%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKH--DNVI 92
IK +G G++G V + ET A+K ++ +++V L+ I+H +
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDK------------QKVVKLKQIEHTLNEKR 94
Query: 93 ALKDVMMP---THRISFKDVYLVYELMD----TDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
L+ V P SFKD +Y +M+ ++ ++ H +++ Q++
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLT 154
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL 205
+YLHS ++++RDLKP NL+++ +K+ DFG A+ +G + T Y APE++
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCG---TPEYLAPEII 211
Query: 206 LCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
L Y ++D W++G + E+ P F + + + I+S
Sbjct: 212 L-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 130/299 (43%), Gaps = 40/299 (13%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL-LRHI 86
ID V + +G G G V N+ T EK A+K + D + RE+ L R
Sbjct: 66 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 118
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQII--KSSQSLSNDHCKYFVFQLL 143
+ +++ + DV + K + +V E +D +L I + Q+ + + +
Sbjct: 119 QCPHIVRIVDVYENLY-AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 177
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + + T T +Y
Sbjct: 178 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 236
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEF 260
APE +L + Y S D+WS+G I +L P F L I T+
Sbjct: 237 APE-VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL----AISPGMKTRIRMGQYE 291
Query: 261 IDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
NP+ + + L++ +L EP++R+T+TE + HP+I
Sbjct: 292 FPNPE-------------------WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 331
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 18/206 (8%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
++ +G G++G V +R A+K + R+ + T E ++L + H +I
Sbjct: 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIR 70
Query: 94 LKDVMMPTHRISFKDVYLVYELMD----TDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
+ +F+D ++ +MD +L +++ SQ N K++ ++ L+YL
Sbjct: 71 MWG--------TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYL 122
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS +I++RDLKP N+L++ N +KI DFG A+ T Y APE ++
Sbjct: 123 HSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV---PDVTYXLCGTPDYIAPE-VVSTK 178
Query: 210 NYGTSIDVWSVGCIFAEIL-GRKPIF 234
Y SID WS G + E+L G P +
Sbjct: 179 PYNKSIDWWSFGILIYEMLAGYTPFY 204
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 119/238 (50%), Gaps = 18/238 (7%)
Query: 16 KHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR 75
K + T Q ++D ++ IK +G G++G V ++E+ A+K ++ ++ +
Sbjct: 28 KKWETPSQNTAQLD-QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 76 -TLRELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSL 130
TL E +L+ + ++ L+ SFKD +Y+V E + ++ ++
Sbjct: 87 HTLNEKRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
H +++ Q++ +YLHS ++++RDLKP NLL++ +++ DFG A+ +G +
Sbjct: 139 XEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
T Y APE++L Y ++D W++G + E+ P F + + + I+S
Sbjct: 199 CG---TPEYLAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 109/219 (49%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V + ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ H +++ Q++ +YL
Sbjct: 106 LE--------FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 213
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 109/219 (49%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V + ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 106
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ H +++ Q++ +YL
Sbjct: 107 LE--------FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 158
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 214
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 215 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 120/238 (50%), Gaps = 18/238 (7%)
Query: 16 KHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR 75
K + T Q ++D ++ IK +G G++G V ++E+ A+K ++ ++ +
Sbjct: 28 KKWETPSQNTAQLD-QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 76 -TLRELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSL 130
TL E +L+ + ++ L+ SFKD +Y+V E + ++ ++
Sbjct: 87 HTLNEKRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
S H +++ Q++ +YLHS ++++RDLKP NL+++ +++ DFG A+ +G +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
T Y APE+++ Y ++D W++G + E+ P F + + + I+S
Sbjct: 199 CG---TPEYLAPEIII-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 109/219 (49%), Gaps = 17/219 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDNVIA 93
IK +G G++G V + ET A+K ++ ++ + TL E +L+ + ++
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVK 105
Query: 94 LKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYL 149
L+ SFKD +Y+V E + ++ ++ H +++ Q++ +YL
Sbjct: 106 LE--------FSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
HS ++++RDLKP NLL++ +++ DFG A+ +G + T Y APE++L
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCG---TPEYLAPEIIL-SK 213
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
Y ++D W++G + E+ P F + + + I+S
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 136/303 (44%), Gaps = 42/303 (13%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G GA+GVV R T A K + E+ + +R +E+ + ++H ++ L D
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR--KEIQTMSVLRHPTLVNLHDA 116
Query: 98 MMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANIL 155
+ ++ ++YE M ++ +S D ++ Q+ +GL ++H N +
Sbjct: 117 FEDDN-----EMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV 171
Query: 156 HRDLKPGNLLVNA--NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGT 213
H DLKP N++ + +LK+ DFGL +Q + T + APE+ G
Sbjct: 172 HLDLKPENIMFTTKRSNELKLIDFGLT-AHLDPKQSVKVTTGTAEFAAPEVAE-GKPVGY 229
Query: 214 SIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSL 273
D+WSVG + +L +S FG E D E + N +KS
Sbjct: 230 YTDMWSVGVLSYILLSG----------------LSPFGG--ENDDETLRN------VKSC 265
Query: 274 PYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPPAQV 333
++ S + D ++K+L+ +P+ R+T+ +AL+HP+++ P + +Q+
Sbjct: 266 DWNMD---DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRD--SQI 320
Query: 334 PLS 336
P S
Sbjct: 321 PSS 323
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 136/303 (44%), Gaps = 42/303 (13%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G GA+GVV R T A K + E+ + +R +E+ + ++H ++ L D
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVR--KEIQTMSVLRHPTLVNLHDA 222
Query: 98 MMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANIL 155
+ ++ ++YE M ++ +S D ++ Q+ +GL ++H N +
Sbjct: 223 FEDDN-----EMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV 277
Query: 156 HRDLKPGNLLVNA--NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGT 213
H DLKP N++ + +LK+ DFGL +Q + T + APE+ G
Sbjct: 278 HLDLKPENIMFTTKRSNELKLIDFGLT-AHLDPKQSVKVTTGTAEFAAPEVAE-GKPVGY 335
Query: 214 SIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSL 273
D+WSVG + +L +S FG E D E + N +KS
Sbjct: 336 YTDMWSVGVLSYILLSG----------------LSPFGG--ENDDETLRN------VKSC 371
Query: 274 PYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISGLYDPQCNPPAQV 333
++ S + D ++K+L+ +P+ R+T+ +AL+HP+++ P + +Q+
Sbjct: 372 DWNMD---DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRD--SQI 426
Query: 334 PLS 336
P S
Sbjct: 427 PSS 429
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 119/238 (50%), Gaps = 18/238 (7%)
Query: 16 KHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR 75
K + T Q ++D ++ IK +G G++G V ++E+ A+K ++ ++ +
Sbjct: 28 KKWETPSQNTAQLD-QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 76 -TLRELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSL 130
TL E +L+ + ++ L+ SFKD +Y+V E + ++ ++
Sbjct: 87 HTLNEKRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
S H +++ Q++ +YLHS ++++RDLKP NLL++ +++ DFG A+ +G +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
T Y AP ++L Y ++D W++G + E+ P F + + + I+S
Sbjct: 199 CG---TPEYLAPAIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G +G V I+++T E+VAIK+ + + R E+ +++ + H NV++ ++V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK-NRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 98 MMPTHRISFKDV-YLVYELMDT-DLHQIIKSSQS---LSNDHCKYFVFQLLRGLKYLHSA 152
+++ D+ L E + DL + + ++ L + + + L+YLH
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 141
Query: 153 NILHRDLKPGNLLVNANCDL---KICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
I+HRDLKP N+++ KI D G A+ E TE+V T Y APELL
Sbjct: 142 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-LCTEFVGTLQYLAPELLE-QK 199
Query: 210 NYGTSIDVWSVGCI-FAEILGRKPIFP 235
Y ++D WS G + F I G +P P
Sbjct: 200 KYTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 12/207 (5%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G +G V I+++T E+VAIK+ + + R E+ +++ + H NV++ ++V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK-NRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 98 MMPTHRISFKDV-YLVYELMDT-DLHQIIKSSQS---LSNDHCKYFVFQLLRGLKYLHSA 152
+++ D+ L E + DL + + ++ L + + + L+YLH
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 140
Query: 153 NILHRDLKPGNLLVNANCDL---KICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
I+HRDLKP N+++ KI D G A+ E TE+V T Y APELL
Sbjct: 141 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-LCTEFVGTLQYLAPELLE-QK 198
Query: 210 NYGTSIDVWSVGCI-FAEILGRKPIFP 235
Y ++D WS G + F I G +P P
Sbjct: 199 KYTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 10/200 (5%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTL-RELVLLRHIKHDN 90
YV +G G +G V ++ T KVA+K +N +D + + RE+ L+ +H +
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 91 VIALKDVM-MPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
+I L V+ PT D ++V E + +L I + + Q+L + Y
Sbjct: 73 IIKLYQVISTPT------DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDY 126
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCC 208
H ++HRDLKP N+L++A+ + KI DFGL+ E F+ + + Y APE++
Sbjct: 127 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-FLRDSCGSPNYAAPEVISGR 185
Query: 209 DNYGTSIDVWSVGCIFAEIL 228
G +D+WS G I +L
Sbjct: 186 LYAGPEVDIWSCGVILYALL 205
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 9/203 (4%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALK 95
K IG+G + V + + T +VA+K I+ N + RE+ +++ + H N++ L
Sbjct: 21 KTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLF 80
Query: 96 DVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+V+ + K +YLV E ++ + + + + Q++ ++Y H I
Sbjct: 81 EVIE-----TEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYI 135
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEYVVTRWYRAPELLLCCDNYGT 213
+HRDLK NLL++ + ++KI DFG + + GN+ + + + Y APEL G
Sbjct: 136 VHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK--LDTFCGSPPYAAPELFQGKKYDGP 193
Query: 214 SIDVWSVGCIFAEILGRKPIFPG 236
+DVWS+G I ++ F G
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFDG 216
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 128/292 (43%), Gaps = 43/292 (14%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKH-DNVIAL 94
K +GRG + VV I++ T ++ A K + + L E+ +L K VI L
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINL 94
Query: 95 KDVMMPTHRISFKDVYL----VYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+V T I Y ++ L +L +++ ND + + Q+L G+ YLH
Sbjct: 95 HEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSE-----NDVIR-LIKQILEGVYYLH 148
Query: 151 SANILHRDLKPGNLLVNAN---CDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLC 207
NI+H DLKP N+L+++ D+KI DFG++R G+ + E + T Y APE +L
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR-KIGHACELREIMGTPEYLAPE-ILN 206
Query: 208 CDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKAR 267
D T+ D+W++G I +L F G + QE L
Sbjct: 207 YDPITTATDMWNIGIIAYMLLTHTSPFVGED--------------NQETYLNISQ----- 247
Query: 268 RFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
++ YS T + LA D +Q +LV P KR T L H ++
Sbjct: 248 ---VNVDYSEET-----FSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWL 291
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 133/335 (39%), Gaps = 84/335 (25%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRT--LRELVLLRHIK-HDNVIAL 94
+G GA+ V + IN T+++ A+K + E + +R+ RE+ +L + H NV+ L
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVK----IIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 95 KDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ R YLV+E M + I + + V + L +LH+
Sbjct: 77 IEFFEEEDRF-----YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKG 131
Query: 154 ILHRDLKPGNLLV---NANCDLKICDFGLAR-----------------TSRGNEQFMTEY 193
I HRDLKP N+L N +KICDFGL T G+ ++M
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 194 VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGT--------------EC 239
VV + + Y D+WS+G I +L P F G C
Sbjct: 192 VVEAFSEEASI------YDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC 245
Query: 240 LNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKM 299
N L F + QE EF D A HIS A DL+ K+
Sbjct: 246 QNML------FESIQEGKYEFPDKDWA-------------HISCA-------AKDLISKL 279
Query: 300 LVFEPSKRITVTEALQHPYISGLYDPQCNPPAQVP 334
LV + +R++ + LQHP++ G C P +P
Sbjct: 280 LVRDAKQRLSAAQVLQHPWVQG-----CAPENTLP 309
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 127/293 (43%), Gaps = 39/293 (13%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
+ +G GA+G V + N+ET A K I E ++ + E+ +L H ++ L
Sbjct: 16 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDY--IVEIEILATCDHPYIVKL 73
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
++ + +D + ++ + L+ + Q+L L +LHS I
Sbjct: 74 LGAYYHDGKLWIMIEFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSKRI 130
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLC----CDN 210
+HRDLK GN+L+ D+++ DFG++ + Q ++ T ++ APE+++C
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 190
Query: 211 YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
Y D+WS+G E+ +P P E LN +++++ + + D P
Sbjct: 191 YDYKADIWSLGITLIEMAQIEP--PHHE-LNPMRVLLKIAKS---------DPP------ 232
Query: 271 KSLPYSRGTHISSLYPQADPLAL-DLLQKMLVFEPSKRITVTEALQHPYISGL 322
+ L P + D L+ L P R + + L+HP++S +
Sbjct: 233 -----------TLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSI 274
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 127/293 (43%), Gaps = 39/293 (13%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
+ +G GA+G V + N+ET A K I E ++ + E+ +L H ++ L
Sbjct: 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDY--IVEIEILATCDHPYIVKL 81
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
++ + +D + ++ + L+ + Q+L L +LHS I
Sbjct: 82 LGAYYHDGKLWIMIEFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSKRI 138
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLC----CDN 210
+HRDLK GN+L+ D+++ DFG++ + Q ++ T ++ APE+++C
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 198
Query: 211 YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
Y D+WS+G E+ +P P E LN +++++ + + D P
Sbjct: 199 YDYKADIWSLGITLIEMAQIEP--PHHE-LNPMRVLLKIAKS---------DPP------ 240
Query: 271 KSLPYSRGTHISSLYPQADPLAL-DLLQKMLVFEPSKRITVTEALQHPYISGL 322
+ L P + D L+ L P R + + L+HP++S +
Sbjct: 241 -----------TLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSI 282
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 131/318 (41%), Gaps = 65/318 (20%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+GRG++G V +++T + A+KK+ R++ R EL+ + ++ L
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKV------RLEVFRA-EELMACAGLTSPRIVPLYGA 134
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILH 156
+ ++ + EL++ L Q++K L D Y++ Q L GL+YLHS ILH
Sbjct: 135 VREGPWVN-----IFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILH 189
Query: 157 RDLKPGNLLVNANCD-LKICDFG----LARTSRGNEQFMTEYV-VTRWYRAPELLL--CC 208
D+K N+L++++ +CDFG L G + +Y+ T + APE++L C
Sbjct: 190 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSC 249
Query: 209 DNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
D +DVWS C+ +L P T +F P +
Sbjct: 250 D---AKVDVWSSCCMMLHML--NGCHPWT---------------------QFFRGPLCLK 283
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE-------------ALQ 315
P R + P PL +Q+ L EP R++ E L+
Sbjct: 284 IASEPPPVR-----EIPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKVNRALQQVGGLK 338
Query: 316 HPYISGLYDPQCNPPAQV 333
P+ +P+ PP Q
Sbjct: 339 SPWRGEYKEPRHPPPNQA 356
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 128/308 (41%), Gaps = 51/308 (16%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD-NVIALKD 96
+G GAY V +++ + ++ A+K I + R RE+ L + + N++ L +
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEK--QAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 97 VMMPTHRISFKDVYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANIL 155
R YLV+E L + I+ + + V + L +LH+ I
Sbjct: 79 FFEDDTRF-----YLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIA 133
Query: 156 HRDLKPGNLLVNAN---CDLKICDFGLARTSRGNEQF-------MTEYVVTRWYRAPELL 205
HRDLKP N+L + +KICDF L + N +T + Y APE++
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVV 193
Query: 206 LCCDN----YGTSIDVWSVGCIFAEILGRKPIFPG---TECLNQLKLIISV-----FGTQ 253
+ Y D+WS+G + +L P F G +C + V F +
Sbjct: 194 EVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESI 253
Query: 254 QEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEA 313
QE EF D A HISS A DL+ K+LV + +R++ +
Sbjct: 254 QEGKYEFPDKDWA-------------HISSE-------AKDLISKLLVRDAKQRLSAAQV 293
Query: 314 LQHPYISG 321
LQHP++ G
Sbjct: 294 LQHPWVQG 301
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 119/238 (50%), Gaps = 18/238 (7%)
Query: 16 KHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR 75
K + T Q ++D ++ IK +G G++G V ++E+ A+K ++ ++ +
Sbjct: 28 KKWETPSQNTAQLD-QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIE 86
Query: 76 -TLRELVLLRHIKHDNVIALKDVMMPTHRISFKD---VYLVYE-LMDTDLHQIIKSSQSL 130
TL E +L+ + ++ L+ SFKD +Y+V E + ++ ++
Sbjct: 87 HTLNEKRILQAVNFPFLVKLE--------FSFKDNSNLYMVMEYVAGGEMFSHLRRIGRF 138
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
S H +++ Q++ +YLHS ++++RDLKP NLL++ +++ DFG A+ +G +
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIS 248
T APE++L Y ++D W++G + E+ P F + + + I+S
Sbjct: 199 CG---TPEALAPEIIL-SKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTL-RELVLLRHIKHDN 90
YV +G G +G V ++ T KVA+K +N +D + + RE+ L+ +H +
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 91 VIALKDVM-MPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
+I L V+ PT D ++V E + +L I + + Q+L + Y
Sbjct: 73 IIKLYQVISTPT------DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDY 126
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCC 208
H ++HRDLKP N+L++A+ + KI DFGL+ E F+ + Y APE++
Sbjct: 127 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE-FLRTSCGSPNYAAPEVISGR 185
Query: 209 DNYGTSIDVWSVGCIFAEIL 228
G +D+WS G I +L
Sbjct: 186 LYAGPEVDIWSCGVILYALL 205
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 28/212 (13%)
Query: 36 KPIGRGAYG-VVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
K +G G +G V ++ N+ T KVA+K + + L E +++ ++HD ++ L
Sbjct: 21 KKLGAGQFGEVWMATYNKHT--KVAVKTMK---PGSMSVEAFLAEANVMKTLQHDKLVKL 75
Query: 95 KDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKY--FVFQLLRGLKYLHS 151
V ++ + +Y++ E M L +KS + K F Q+ G+ ++
Sbjct: 76 HAV------VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 129
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV--TRWYRAPELLLCCD 209
N +HRDL+ N+LV+A+ KI DFGLAR NE E +W APE +
Sbjct: 130 RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW-TAPEAI---- 184
Query: 210 NYGT---SIDVWSVGCIFAEIL--GRKPIFPG 236
N+G+ DVWS G + EI+ GR P +PG
Sbjct: 185 NFGSFTIKSDVWSFGILLMEIVTYGRIP-YPG 215
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 132/301 (43%), Gaps = 46/301 (15%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIK----KINNVFENRIDALRTLRELVLLR 84
D + I +G G GVV ++ + +A K +I N+I +REL +L
Sbjct: 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI-----IRELQVLH 59
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLL 143
++ IS + E MD L Q++K + + ++
Sbjct: 60 ECNSPYIVGFYGAFYSDGEIS-----ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 114
Query: 144 RGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
+GL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + + + +V TR Y +P
Sbjct: 115 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDSMANSFVGTRSYMSP 172
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEI-LGRKPIFPGTECLNQLKLIISVFGTQQEADLEFI 261
E L +Y D+WS+G E+ +GR PI P + + +++F L++I
Sbjct: 173 ERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPI-PPPDAKEDSRPPMAIFEL-----LDYI 225
Query: 262 DN---PKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPY 318
N PK + SL + D + K L+ P++R + + + H +
Sbjct: 226 VNEPPPKLPSGVFSLEFQ-----------------DFVNKCLIKNPAERADLKQLMVHAF 268
Query: 319 I 319
I
Sbjct: 269 I 269
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 28/212 (13%)
Query: 36 KPIGRGAYG-VVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
K +G G +G V ++ N+ T KVA+K + + L E +++ ++HD ++ L
Sbjct: 194 KKLGAGQFGEVWMATYNKHT--KVAVKTMK---PGSMSVEAFLAEANVMKTLQHDKLVKL 248
Query: 95 KDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKY--FVFQLLRGLKYLHS 151
V ++ + +Y++ E M L +KS + K F Q+ G+ ++
Sbjct: 249 HAV------VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV--TRWYRAPELLLCCD 209
N +HRDL+ N+LV+A+ KI DFGLAR NE E +W APE +
Sbjct: 303 RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW-TAPEAI---- 357
Query: 210 NYGT---SIDVWSVGCIFAEIL--GRKPIFPG 236
N+G+ DVWS G + EI+ GR P +PG
Sbjct: 358 NFGSFTIKSDVWSFGILLMEIVTYGRIP-YPG 388
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIK----KINNVFENRIDALRTLRELVLLR 84
D + I +G G GVV ++ + +A K +I N+I +REL +L
Sbjct: 8 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQI-----IRELQVLH 62
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLL 143
++ IS + E MD L Q++K + + ++
Sbjct: 63 ECNSPYIVGFYGAFYSDGEIS-----ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVI 117
Query: 144 RGLKYLHSAN-ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAP 202
+GL YL + I+HRD+KP N+LVN+ ++K+CDFG+ + + ++ E+V TR Y +P
Sbjct: 118 KGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV--SGQLIDEMANEFVGTRSYMSP 175
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEI-LGRKPIFP 235
E L +Y D+WS+G E+ +GR P P
Sbjct: 176 ERLQGT-HYSVQSDIWSMGLSLVEMAVGRYPRPP 208
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 133/315 (42%), Gaps = 45/315 (14%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL-LRHI 86
ID V + +G G G V N+ T EK A+K + D + RE+ L R
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQ-------DCPKARREVELHWRAS 112
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQII--KSSQSLSNDHCKYFVFQLL 143
+ +++ + DV + K + +V E +D +L I + Q+ + +
Sbjct: 113 QCPHIVRIVDVYENLY-AGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIG 171
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + + T T +Y
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP-CYTPYYV 230
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEF 260
APE +L + Y S D WS+G I +L P F + L IS
Sbjct: 231 APE-VLGPEKYDKSCDXWSLGVIXYILLCGYPPF-----YSNHGLAIS------------ 272
Query: 261 IDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS 320
P + I+ Y + + + L++ +L EP++R T+TE HP+I
Sbjct: 273 ---PGXKTRIRXGQYE---FPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIX 326
Query: 321 GLYDPQCNPPAQVPL 335
Q Q PL
Sbjct: 327 -----QSTKVPQTPL 336
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 126/304 (41%), Gaps = 61/304 (20%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+GRG++G V +++T + A+KK+ R++ R EL+ + ++ L
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKV------RLEVFRA-EELMACAGLTSPRIVPLYGA 153
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILH 156
+ V + EL++ L Q++K L D Y++ Q L GL+YLHS ILH
Sbjct: 154 VR-----EGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILH 208
Query: 157 RDLKPGNLLVNANCD-LKICDFG----LARTSRGNEQFMTEYV-VTRWYRAPELLL--CC 208
D+K N+L++++ +CDFG L G +Y+ T + APE++L C
Sbjct: 209 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSC 268
Query: 209 DNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARR 268
D +DVWS C+ +L P T +F P +
Sbjct: 269 D---AKVDVWSSCCMMLHML--NGCHPWT---------------------QFFRGPLCLK 302
Query: 269 FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTE-------ALQHPYISG 321
P R + P PL +Q+ L EP R++ E ALQ + G
Sbjct: 303 IASEPPPVR-----EIPPSCAPLTAQAIQEGLRKEPIHRVSAAELGGKVNRALQQ--VGG 355
Query: 322 LYDP 325
L P
Sbjct: 356 LKSP 359
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 112/242 (46%), Gaps = 61/242 (25%)
Query: 109 VYLVYELMDTDLHQIIKSSQSLSNDHCK----YFVFQLLR----GLKYLHSANILHRDLK 160
+Y+ EL + +L +++S +++S+++ K Y LLR G+ +LHS I+HRDLK
Sbjct: 84 LYIALELCNLNLQDLVES-KNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLK 142
Query: 161 PGNLLVNA-------------NCDLKICDFGLART-SRGNEQFMTEY---VVTRWYRAPE 203
P N+LV+ N + I DFGL + G F T T +RAPE
Sbjct: 143 PQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPE 202
Query: 204 LLLCCDNYGT------SIDVWSVGCIFAEIL--GRKPIFPGTECLNQLKLIISVFGTQQE 255
LL +N T SID++S+GC+F IL G+ P FG +
Sbjct: 203 LLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP-----------------FGDKYS 245
Query: 256 ADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
+ I R I SL + H SL + A DL+ +M+ +P KR T + L+
Sbjct: 246 RESNII------RGIFSLDEMKCLHDRSLIAE----ATDLISQMIDHDPLKRPTAMKVLR 295
Query: 316 HP 317
HP
Sbjct: 296 HP 297
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 106/224 (47%), Gaps = 10/224 (4%)
Query: 30 TKYVPIKPIGRGAYG---VVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHI 86
+++ +K +G+G++G +V + + A+K + D +RT E +L +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
H ++ L ++ YL+ + + DL + + + K+++ +L
Sbjct: 84 NHPFIVKLHYAFQTEGKL-----YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA 138
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL 205
L +LHS I++RDLKP N+L++ +K+ DFGL++ S +E+ + T Y APE +
Sbjct: 139 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE-V 197
Query: 206 LCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISV 249
+ + S D WS G + E+L F G + + +I+
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 106/224 (47%), Gaps = 10/224 (4%)
Query: 30 TKYVPIKPIGRGAYG---VVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHI 86
+++ +K +G+G++G +V + + A+K + D +RT E +L +
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
H ++ L ++ YL+ + + DL + + + K+++ +L
Sbjct: 85 NHPFIVKLHYAFQTEGKL-----YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA 139
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL 205
L +LHS I++RDLKP N+L++ +K+ DFGL++ S +E+ + T Y APE +
Sbjct: 140 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE-V 198
Query: 206 LCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISV 249
+ + S D WS G + E+L F G + + +I+
Sbjct: 199 VNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 242
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 106/224 (47%), Gaps = 10/224 (4%)
Query: 30 TKYVPIKPIGRGAYG---VVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHI 86
+++ +K +G+G++G +V + + A+K + D +RT E +L +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
H ++ L ++ YL+ + + DL + + + K+++ +L
Sbjct: 84 NHPFIVKLHYAFQTEGKL-----YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA 138
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL 205
L +LHS I++RDLKP N+L++ +K+ DFGL++ S +E+ + T Y APE +
Sbjct: 139 LDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPE-V 197
Query: 206 LCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISV 249
+ + S D WS G + E+L F G + + +I+
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 132/335 (39%), Gaps = 84/335 (25%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRT--LRELVLLRHIK-HDNVIAL 94
+G GA+ V + IN T+++ A+K + E + +R+ RE+ +L + H NV+ L
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVK----IIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 95 KDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ R YLV+E M + I + + V + L +LH+
Sbjct: 77 IEFFEEEDRF-----YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKG 131
Query: 154 ILHRDLKPGNLLV---NANCDLKICDFGLAR-----------------TSRGNEQFMTEY 193
I HRDLKP N+L N +KICDF L T G+ ++M
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 194 VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGT--------------EC 239
VV + + Y D+WS+G I +L P F G C
Sbjct: 192 VVEAFSEEASI------YDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPAC 245
Query: 240 LNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKM 299
N L F + QE EF D A HIS A DL+ K+
Sbjct: 246 QNML------FESIQEGKYEFPDKDWA-------------HISCA-------AKDLISKL 279
Query: 300 LVFEPSKRITVTEALQHPYISGLYDPQCNPPAQVP 334
LV + +R++ + LQHP++ G C P +P
Sbjct: 280 LVRDAKQRLSAAQVLQHPWVQG-----CAPENTLP 309
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLK 147
DNV+ +K + YL +E + SLS + ++ L + LK
Sbjct: 79 QDNVMGVKYCFRKNDHVVIAMPYLEHE-------SFLDILNSLSFQEVREYMLNLFKALK 131
Query: 148 YLHSANILHRDLKPGNLLVNANCD-LKICDFGLARTSRGNEQFMTEYVV----------- 195
+H I+HRD+KP N L N + DFGLA+ + + + ++V
Sbjct: 132 RIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQN 191
Query: 196 -----------------TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGT 237
T +RAPE+L C N T+ID+WS G IF +L GR P + +
Sbjct: 192 KCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251
Query: 238 ECLNQLKLIISVFGTQQ 254
+ L L I+++ G+++
Sbjct: 252 DDLTALAQIMTIRGSRE 268
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 100/203 (49%), Gaps = 10/203 (4%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENR---IDALRTLRELVLLRHIKHDNV 91
++ IGRG+Y V ++T+ A+K + N ID ++T + V + H +
Sbjct: 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH-VFEQASNHPFL 72
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
+ L R+ F ++ + DL ++ + L +H +++ ++ L YLH
Sbjct: 73 VGLHSCFQTESRLFF----VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 128
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
I++RDLK N+L+++ +K+ D+G+ + + + T Y APE+L D Y
Sbjct: 129 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED-Y 187
Query: 212 GTSIDVWSVGCIFAEIL-GRKPI 233
G S+D W++G + E++ GR P
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPF 210
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 100/203 (49%), Gaps = 10/203 (4%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENR---IDALRTLRELVLLRHIKHDNV 91
++ IGRG+Y V ++T+ A+K + N ID ++T + V + H +
Sbjct: 10 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH-VFEQASNHPFL 68
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
+ L R+ F ++ + DL ++ + L +H +++ ++ L YLH
Sbjct: 69 VGLHSCFQTESRLFF----VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 124
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
I++RDLK N+L+++ +K+ D+G+ + + + T Y APE+L D Y
Sbjct: 125 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED-Y 183
Query: 212 GTSIDVWSVGCIFAEIL-GRKPI 233
G S+D W++G + E++ GR P
Sbjct: 184 GFSVDWWALGVLMFEMMAGRSPF 206
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 135/293 (46%), Gaps = 64/293 (21%)
Query: 52 RETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYL 111
+ N+K++IK + F+N EL ++ IK++ + + ++ ++ +VY+
Sbjct: 75 KSNNDKISIKSKYDDFKN---------ELQIITDIKNEYCLTCEGIIT-----NYDEVYI 120
Query: 112 VYELMDTDLHQIIKSSQSL----SNDHC-------KYFVFQLLRGLKYLHS-ANILHRDL 159
+YE M+ D I+K + N C K + +L Y+H+ NI HRD+
Sbjct: 121 IYEYMEND--SILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDV 178
Query: 160 KPGNLLVNANCDLKICDFGLA--------RTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
KP N+L++ N +K+ DFG + + SRG +FM PE +Y
Sbjct: 179 KPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFM----------PPEFFSNESSY 228
Query: 212 -GTSIDVWSVG-CIFAEILGRKPIFPGTECLNQLKL-IISVFGTQQEADLEFIDNPKARR 268
G +D+WS+G C++ P LK+ ++ +F + ++E+ P R
Sbjct: 229 NGAKVDIWSLGICLYVMFYNVVPF--------SLKISLVELFNNIRTKNIEY---PLDRN 277
Query: 269 -FIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS 320
F+ L + T ++ D +D L+ L P++RIT +AL+H +++
Sbjct: 278 HFLYPLTNKKSTCSNNFLSNED---IDFLKLFLRKNPAERITSEDALKHEWLA 327
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 101/220 (45%), Gaps = 23/220 (10%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IK +G G +G V N KVAIK + + L E +++ +KHD ++ L
Sbjct: 14 IKRLGNGQFGEVWMG-TWNGNTKVAIKTLK---PGTMSPESFLEEAQIMKKLKHDKLVQL 69
Query: 95 KDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQ--SLSNDHCKYFVFQLLRGLKYLHS 151
V +S + +Y+V E M+ L +K + +L + Q+ G+ Y+
Sbjct: 70 YAV------VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER 123
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV--TRWYRAPELLLCCD 209
N +HRDL+ N+LV KI DFGLAR NE + +W APE L
Sbjct: 124 MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKW-TAPEAAL-YG 181
Query: 210 NYGTSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + E++ GR P +PG E L Q++
Sbjct: 182 RFTIKSDVWSFGILLTELVTKGRVP-YPGMNNREVLEQVE 220
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 22/205 (10%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKIN-NVFENRIDALRTLRELVLLRHIKHDNVIALKD 96
IG GA VV ++ EKVAIK+IN + +D L L+E+ + H N+++
Sbjct: 23 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDEL--LKEIQAMSQCHHPNIVSYY- 79
Query: 97 VMMPTHRISFKDVYLVYELM------DTDLHQIIKS---SQSLSNDHCKYFVFQLLRGLK 147
T + +++LV +L+ D H + K S L + ++L GL+
Sbjct: 80 ----TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGL-ARTSRGNE----QFMTEYVVTRWYRAP 202
YLH +HRD+K GN+L+ + ++I DFG+ A + G + + +V T + AP
Sbjct: 136 YLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 195
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEI 227
E++ Y D+WS G E+
Sbjct: 196 EVMEQVRGYDFKADIWSFGITAIEL 220
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 18/236 (7%)
Query: 35 IKPIGRGAYGVVC---SSINRETNEKVAIKKINN--VFENRIDALRTLRELVLLRHIKHD 89
++ +G+G YG V T + A+K + + N D T E +L +KH
Sbjct: 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 90 NVIALKDVMMPTHRISFKDVYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
++ L ++ YL+ E L +L ++ D +++ ++ L +
Sbjct: 82 FIVDLIYAFQTGGKL-----YLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCC 208
LH I++RDLKP N+++N +K+ DFGL + S + + T Y APE+L+
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRS 196
Query: 209 DNYGTSIDVWSVGCIFAEILGRKPIFPGT------ECLNQLKLIISVFGTQQEADL 258
+ ++D WS+G + ++L P F G + + + KL + + TQ+ DL
Sbjct: 197 -GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDL 251
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 18/236 (7%)
Query: 35 IKPIGRGAYGVVC---SSINRETNEKVAIKKINN--VFENRIDALRTLRELVLLRHIKHD 89
++ +G+G YG V T + A+K + + N D T E +L +KH
Sbjct: 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHP 81
Query: 90 NVIALKDVMMPTHRISFKDVYLVYE-LMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
++ L ++ YL+ E L +L ++ D +++ ++ L +
Sbjct: 82 FIVDLIYAFQTGGKL-----YLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGH 136
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCC 208
LH I++RDLKP N+++N +K+ DFGL + S + + T Y APE+L+
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRS 196
Query: 209 DNYGTSIDVWSVGCIFAEILGRKPIFPGT------ECLNQLKLIISVFGTQQEADL 258
+ ++D WS+G + ++L P F G + + + KL + + TQ+ DL
Sbjct: 197 -GHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDL 251
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 22/205 (10%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKIN-NVFENRIDALRTLRELVLLRHIKHDNVIALKD 96
IG GA VV ++ EKVAIK+IN + +D L L+E+ + H N+++
Sbjct: 18 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDEL--LKEIQAMSQCHHPNIVSYY- 74
Query: 97 VMMPTHRISFKDVYLVYELM------DTDLHQIIKS---SQSLSNDHCKYFVFQLLRGLK 147
T + +++LV +L+ D H + K S L + ++L GL+
Sbjct: 75 ----TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 130
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGL-ARTSRGNE----QFMTEYVVTRWYRAP 202
YLH +HRD+K GN+L+ + ++I DFG+ A + G + + +V T + AP
Sbjct: 131 YLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAP 190
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEI 227
E++ Y D+WS G E+
Sbjct: 191 EVMEQVRGYDFKADIWSFGITAIEL 215
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 100/203 (49%), Gaps = 10/203 (4%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENR---IDALRTLRELVLLRHIKHDNV 91
++ IGRG+Y V ++T+ A+K + N ID ++T + V + H +
Sbjct: 25 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKH-VFEQASNHPFL 83
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
+ L R+ F ++ + DL ++ + L +H +++ ++ L YLH
Sbjct: 84 VGLHSCFQTESRLFF----VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 139
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
I++RDLK N+L+++ +K+ D+G+ + + + T Y APE+L D Y
Sbjct: 140 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGED-Y 198
Query: 212 GTSIDVWSVGCIFAEIL-GRKPI 233
G S+D W++G + E++ GR P
Sbjct: 199 GFSVDWWALGVLMFEMMAGRSPF 221
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 101/206 (49%), Gaps = 15/206 (7%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINN--VFENRIDALRTLRELVLLRHIKHDNVI 92
+K IG+G++G V + ++ A+K + + + + + VLL+++KH ++
Sbjct: 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLV 102
Query: 93 ALKDVMMPTHRISFKDVYLVYELMD----TDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
L SF+ +Y ++D +L ++ + +++ ++ L Y
Sbjct: 103 GL--------HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGY 154
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCC 208
LHS NI++RDLKP N+L+++ + + DFGL + + + + + T Y APE +L
Sbjct: 155 LHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPE-VLHK 213
Query: 209 DNYGTSIDVWSVGCIFAEILGRKPIF 234
Y ++D W +G + E+L P F
Sbjct: 214 QPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 129/312 (41%), Gaps = 61/312 (19%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 62
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E M+ DL I +L + +
Sbjct: 63 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERMEPVQDLFDFITERGALQEELAR 117
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 118 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 175
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQ 254
TR Y PE + +G S VWS+G + +++ G P
Sbjct: 176 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--------------------- 214
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E D E I + + F + S H L++ L PS R T E
Sbjct: 215 EHDEEII---RGQVFFRQRVSSECQH--------------LIRWCLALRPSDRPTFEEIQ 257
Query: 315 QHPYISGLYDPQ 326
HP++ + PQ
Sbjct: 258 NHPWMQDVLLPQ 269
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 32/227 (14%)
Query: 27 EIDTKYVPIKP-IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVL 82
EID YV I+ IG G +G VC + +K VAIK + + R L E +
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTER-QRREFLSEASI 70
Query: 83 LRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ +H N+I L+ V+ + + ++ +D+ L ND ++ V QL
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRL---------NDG-QFTVIQL 120
Query: 143 L-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY-- 193
+ G++YL + +HRDL N+LVN+N K+ DFGL+R N TE
Sbjct: 121 VGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSS 180
Query: 194 ----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
+ RW APE + + ++ D WS G + E++ G +P +
Sbjct: 181 LGGKIPIRWT-APE-AIAFRKFTSASDAWSYGIVMWEVMSFGERPYW 225
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
++ +G+G +G V C + T E VA+KK+ + E + RE+ +L+ ++HDN
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 72
Query: 91 VIALKDVMMPTHRISFKDV--YLVYELMDTDLHQIIKSSQSLSNDHCKYFVF--QLLRGL 146
++ K V R + K + YL Y + L K + + DH K + Q+ +G+
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERI--DHIKLLQYTSQICKGM 127
Query: 147 KYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTR----WYRAP 202
+YL + +HRDL N+LV +KI DFGL + +++F WY AP
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-AP 186
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEIL 228
E L + + DVWS G + E+
Sbjct: 187 E-SLTESKFSVASDVWSFGVVLYELF 211
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 112/242 (46%), Gaps = 61/242 (25%)
Query: 109 VYLVYELMDTDLHQIIKSSQSLSNDHCK----YFVFQLLR----GLKYLHSANILHRDLK 160
+Y+ EL + +L +++S +++S+++ K Y LLR G+ +LHS I+HRDLK
Sbjct: 84 LYIALELCNLNLQDLVES-KNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLK 142
Query: 161 PGNLLVNA-------------NCDLKICDFGLART-SRGNEQF---MTEYVVTRWYRAPE 203
P N+LV+ N + I DFGL + G F + T +RAPE
Sbjct: 143 PQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPE 202
Query: 204 LLLCCDNYGT------SIDVWSVGCIFAEIL--GRKPIFPGTECLNQLKLIISVFGTQQE 255
LL +N T SID++S+GC+F IL G+ P FG +
Sbjct: 203 LLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP-----------------FGDKYS 245
Query: 256 ADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQ 315
+ I R I SL + H SL + A DL+ +M+ +P KR T + L+
Sbjct: 246 RESNII------RGIFSLDEMKCLHDRSLIAE----ATDLISQMIDHDPLKRPTAMKVLR 295
Query: 316 HP 317
HP
Sbjct: 296 HP 297
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 24/200 (12%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+GRG++G V +++T + A+KK+ R++ R + ELV + ++ L
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFR-VEELVACAGLSSPRIVPLYGA 134
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILH 156
+ ++ + EL++ L Q+IK L D Y++ Q L GL+YLH+ ILH
Sbjct: 135 VREGPWVN-----IFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 189
Query: 157 RDLKPGNLLVNANCD-LKICDFG----LARTSRGNEQFMTEYV-VTRWYRAPELLLC--C 208
D+K N+L++++ +CDFG L G +Y+ T + APE+++ C
Sbjct: 190 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 249
Query: 209 DNYGTSIDVWSVGCIFAEIL 228
D +D+WS C+ +L
Sbjct: 250 D---AKVDIWSSCCMMLHML 266
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 12/204 (5%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + +T + AIK ++ + + + + L H H N+
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH--HRNIATYYGA 89
Query: 98 MMPTHRISFKD-VYLVYELMD----TDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
+ + D ++LV E TDL + K + +L + Y ++LRGL +LH
Sbjct: 90 FIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGN-TLKEEWIAYICREILRGLSHLHQH 148
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN-- 210
++HRD+K N+L+ N ++K+ DFG++ ++ T ++ APE++ C +N
Sbjct: 149 KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPD 208
Query: 211 --YGTSIDVWSVGCIFAEILGRKP 232
Y D+WS+G E+ P
Sbjct: 209 ATYDFKSDLWSLGITAIEMAEGAP 232
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 24/200 (12%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+GRG++G V +++T + A+KK+ R++ R + ELV + ++ L
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFR-VEELVACAGLSSPRIVPLYGA 118
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILH 156
+ ++ + EL++ L Q+IK L D Y++ Q L GL+YLH+ ILH
Sbjct: 119 VREGPWVN-----IFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 173
Query: 157 RDLKPGNLLVNANCD-LKICDFG----LARTSRGNEQFMTEYV-VTRWYRAPELLLC--C 208
D+K N+L++++ +CDFG L G +Y+ T + APE+++ C
Sbjct: 174 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 233
Query: 209 DNYGTSIDVWSVGCIFAEIL 228
D +D+WS C+ +L
Sbjct: 234 D---AKVDIWSSCCMMLHML 250
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q +S Y Q+ ++YL N
Sbjct: 76 C--TREPPF---YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--FTAHAGAKFPIKWTAPE-SLAYNKF 187
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPG 236
DVW+ G + EI G P +PG
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSP-YPG 213
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 121/289 (41%), Gaps = 41/289 (14%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKI-NNVFENRIDALRTLRELVLLRHIKHDNVIA 93
++P+G+G +G V + ++ +A+K + + E + RE+ + H++H N++
Sbjct: 19 VRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILR 78
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
+ + RI YL+ E +L++ ++ F+ +L L Y H
Sbjct: 79 MYNYFHDRKRI-----YLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
++HRD+KP NLL+ +LKI DFG + + + T Y PE ++ +
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR--RXMCGTLDYLPPE-MIEGKTHD 190
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
+D+W G + E L P F + I++V DL+F
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-------DLKFP----------- 232
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
P + DL+ K+L + P +R+ + ++HP++
Sbjct: 233 -------------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA 268
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 10/203 (4%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENR---IDALRTLRELVLLRHIKHDNV 91
++ IGRG+Y V ++T+ A++ + N ID ++T + V + H +
Sbjct: 57 LRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKH-VFEQASNHPFL 115
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
+ L R+ F ++ + DL ++ + L +H +++ ++ L YLH
Sbjct: 116 VGLHSCFQTESRLFF----VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 171
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
I++RDLK N+L+++ +K+ D+G+ + + + T Y APE+L D Y
Sbjct: 172 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGED-Y 230
Query: 212 GTSIDVWSVGCIFAEIL-GRKPI 233
G S+D W++G + E++ GR P
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPF 253
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 24/200 (12%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+GRG++G V +++T + A+KK+ R++ R + ELV + ++ L
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKV------RLEVFR-VEELVACAGLSSPRIVPLYGA 132
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILH 156
+ ++ + EL++ L Q+IK L D Y++ Q L GL+YLH+ ILH
Sbjct: 133 VREGPWVN-----IFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILH 187
Query: 157 RDLKPGNLLVNANCD-LKICDFG----LARTSRGNEQFMTEYV-VTRWYRAPELLLC--C 208
D+K N+L++++ +CDFG L G +Y+ T + APE+++ C
Sbjct: 188 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 247
Query: 209 DNYGTSIDVWSVGCIFAEIL 228
D +D+WS C+ +L
Sbjct: 248 D---AKVDIWSSCCMMLHML 264
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 136/331 (41%), Gaps = 51/331 (15%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKH 88
D +Y+ ++ +G G + V + + N VA+K + +++ E+ LL+ + +
Sbjct: 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRV-N 73
Query: 89 DNVIALKDVMMPTHRISFKD-----------VYLVYELMDTDLHQIIKSSQ--SLSNDHC 135
D +D M H + D V +V+E++ +L +IK + + +
Sbjct: 74 DADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYV 133
Query: 136 KYFVFQLLRGLKYLHS-ANILHRDLKPGNLLVNAN------CDLKICDFGLARTSRGNEQ 188
K QLL GL Y+H I+H D+KP N+L+ +KI D G A ++
Sbjct: 134 KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY---DE 190
Query: 189 FMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECL------NQ 242
T + TR YR+PE+LL +G D+WS C+ E++ +F E +
Sbjct: 191 HYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249
Query: 243 LKLIISVFGTQQEADLEFIDNPK-ARRFIKSLPYSRGTHISSLYPQADPLA--------- 292
+ II + G E + N K R F S R +P D L
Sbjct: 250 IAQIIELLG---ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDE 306
Query: 293 ----LDLLQKMLVFEPSKRITVTEALQHPYI 319
D L ML +P KR + HP++
Sbjct: 307 AKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 136/331 (41%), Gaps = 51/331 (15%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKH 88
D +Y+ ++ +G G + V + + N VA+K + +++ E+ LL+ + +
Sbjct: 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRV-N 73
Query: 89 DNVIALKDVMMPTHRISFKD-----------VYLVYELMDTDLHQIIK--SSQSLSNDHC 135
D +D M H + D V +V+E++ +L +IK + + +
Sbjct: 74 DADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYV 133
Query: 136 KYFVFQLLRGLKYLHS-ANILHRDLKPGNLLVNAN------CDLKICDFGLARTSRGNEQ 188
K QLL GL Y+H I+H D+KP N+L+ +KI D G A ++
Sbjct: 134 KQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY---DE 190
Query: 189 FMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECL------NQ 242
T + TR YR+PE+LL +G D+WS C+ E++ +F E +
Sbjct: 191 HYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249
Query: 243 LKLIISVFGTQQEADLEFIDNPK-ARRFIKSLPYSRGTHISSLYPQADPLA--------- 292
+ II + G E + N K R F S R +P D L
Sbjct: 250 IAQIIELLG---ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDE 306
Query: 293 ----LDLLQKMLVFEPSKRITVTEALQHPYI 319
D L ML +P KR + HP++
Sbjct: 307 AKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 26/231 (11%)
Query: 10 GMKSRGKHYYTMWQTLFEIDTKYVPIKPIGRGAYGVV--C--SSINRETNEKVAIKKINN 65
G+ RG H T ++ E K+ ++ +G+G +G V C + T E VA+KK+ +
Sbjct: 13 GLVPRGSHNMTQFE---ERHLKF--LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH 67
Query: 66 VFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFKDV--YLVYELMDTDLHQI 123
E + RE+ +L+ ++HDN++ K V R + K + YL Y + L
Sbjct: 68 STEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-- 123
Query: 124 IKSSQSLSNDHCKYFVF--QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR 181
K + + DH K + Q+ +G++YL + +HRDL N+LV +KI DFGL +
Sbjct: 124 -KHKERI--DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK 180
Query: 182 TSRGNEQFMTEYVVTR----WYRAPELLLCCDNYGTSIDVWSVGCIFAEIL 228
+++ WY APE L + + DVWS G + E+
Sbjct: 181 VLPQDKEXXKVKEPGESPIFWY-APE-SLTESKFSVASDVWSFGVVLYELF 229
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 110 YLVYELMD-TDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNA 168
Y+V E +D L I+ + ++ + + L + H I+HRD+KP N+L++A
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISA 151
Query: 169 NCDLKICDFGLAR--TSRGNEQFMTEYVV-TRWYRAPELLLCCDNYGTSIDVWSVGCIFA 225
+K+ DFG+AR GN T V+ T Y +PE D+ DV+S+GC+
Sbjct: 152 TNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQAR-GDSVDARSDVYSLGCVLY 210
Query: 226 EILGRKPIFPG 236
E+L +P F G
Sbjct: 211 EVLTGEPPFTG 221
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 109/231 (47%), Gaps = 26/231 (11%)
Query: 10 GMKSRGKHYYTMWQTLFEIDTKYVPIKPIGRGAYGVV--C--SSINRETNEKVAIKKINN 65
G+ RG H T ++ E K+ ++ +G+G +G V C + T E VA+KK+ +
Sbjct: 13 GLVPRGSHNMTQFE---ERHLKF--LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH 67
Query: 66 VFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFKDV--YLVYELMDTDLHQI 123
E + RE+ +L+ ++HDN++ K V R + K + YL Y + L
Sbjct: 68 STEEHLRDFE--REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-- 123
Query: 124 IKSSQSLSNDHCKYFVF--QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR 181
K + + DH K + Q+ +G++YL + +HRDL N+LV +KI DFGL +
Sbjct: 124 -KHKERI--DHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK 180
Query: 182 TSRGNEQFMTEYVVTR----WYRAPELLLCCDNYGTSIDVWSVGCIFAEIL 228
+++ WY APE L + + DVWS G + E+
Sbjct: 181 VLPQDKEXXKVKEPGESPIFWY-APE-SLTESKFSVASDVWSFGVVLYELF 229
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q +S Y Q+ ++YL N
Sbjct: 76 C--TREPPF---YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE-SLAYNKF 187
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
DVW+ G + EI G P +PG +
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSP-YPGID 215
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 127/302 (42%), Gaps = 59/302 (19%)
Query: 30 TKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENR-IDALRTLRELVLLRHIKH 88
T + PI+ +GRG +GVV + N+ + AIK+I NR + + +RE+ L ++H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIR--LPNRELAREKVMREVKALAKLEH 62
Query: 89 DNVIALKDVMMPTHRI-----SFKDVYLVYELM---DTDLHQIIKSSQSLSNDH---CKY 137
++ + + + S VYL ++ +L + ++ C +
Sbjct: 63 PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM------- 190
Q+ +++LHS ++HRDLKP N+ + +K+ DFGL +E+
Sbjct: 123 IFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMP 182
Query: 191 -----TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKL 245
T V T+ Y +PE + ++Y +D++S+G I E+L +P
Sbjct: 183 AYARHTGQVGTKLYMSPE-QIHGNSYSHKVDIFSLGLILFELL-----YP---------- 226
Query: 246 IISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPS 305
F TQ E +++L R L+ Q P ++Q ML P
Sbjct: 227 ----FSTQMER-------------VRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPM 269
Query: 306 KR 307
+R
Sbjct: 270 ER 271
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q +S Y Q+ ++YL N
Sbjct: 83 C--TREPPF---YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 137
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 194
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLKLI 246
DVW+ G + EI G P +PG + +L+
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 230
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q +S Y Q+ ++YL N
Sbjct: 78 C--TREPPF---YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 189
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPG 236
DVW+ G + EI G P +PG
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP-YPG 215
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q +S Y Q+ ++YL N
Sbjct: 78 C--TREPPF---YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 189
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPG 236
DVW+ G + EI G P +PG
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP-YPG 215
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q +S Y Q+ ++YL N
Sbjct: 78 C--TREPPF---YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 189
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLKLI 246
DVW+ G + EI G P +PG + +L+
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 225
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 34/210 (16%)
Query: 36 KPIGRGAYG-VVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
K +G G +G V ++ N+ T KVA+K + + L E +++ ++HD ++ L
Sbjct: 188 KKLGAGQFGEVWMATYNKHT--KVAVKTMK---PGSMSVEAFLAEANVMKTLQHDKLVKL 242
Query: 95 KDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKY--FVFQLLRGLKYLHS 151
V ++ + +Y++ E M L +KS + K F Q+ G+ ++
Sbjct: 243 HAV------VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 296
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
N +HRDL+ N+LV+A+ KI DFGLAR +F ++ APE + N+
Sbjct: 297 RNYIHRDLRAANILVSASLVCKIADFGLARV---GAKFPIKWT------APEAI----NF 343
Query: 212 GT---SIDVWSVGCIFAEIL--GRKPIFPG 236
G+ DVWS G + EI+ GR P +PG
Sbjct: 344 GSFTIKSDVWSFGILLMEIVTYGRIP-YPG 372
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q +S Y Q+ ++YL N
Sbjct: 78 C--TREPPF---YIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 189
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLKLI 246
DVW+ G + EI G P +PG + +L+
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 225
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 27/226 (11%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + + + L E
Sbjct: 13 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEA 68
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKY 137
L++ ++H ++ L V ++ + +Y++ E M+ L +K S L+ +
Sbjct: 69 NLMKQLQHQRLVRLYAV------VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 122
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV-- 195
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR NE E
Sbjct: 123 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 182
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAEIL--GRKPIFPG 236
+W APE + NYGT DVWS G + EI+ GR P +PG
Sbjct: 183 IKW-TAPEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 222
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 27/226 (11%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + + + L E
Sbjct: 10 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEA 65
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKY 137
L++ ++H ++ L V ++ + +Y++ E M+ L +K S L+ +
Sbjct: 66 NLMKQLQHQRLVRLYAV------VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV-- 195
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR NE E
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 179
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAEIL--GRKPIFPG 236
+W APE + NYGT DVWS G + EI+ GR P +PG
Sbjct: 180 IKW-TAPEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 219
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 27/226 (11%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + + + L E
Sbjct: 12 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEA 67
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKY 137
L++ ++H ++ L V ++ + +Y++ E M+ L +K S L+ +
Sbjct: 68 NLMKQLQHQRLVRLYAV------VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 121
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV-- 195
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR NE E
Sbjct: 122 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 181
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAEIL--GRKPIFPG 236
+W APE + NYGT DVWS G + EI+ GR P +PG
Sbjct: 182 IKW-TAPEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 221
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 27/226 (11%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + + + L E
Sbjct: 4 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEA 59
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKY 137
L++ ++H ++ L V ++ + +Y++ E M+ L +K S L+ +
Sbjct: 60 NLMKQLQHQRLVRLYAV------VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV-- 195
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR NE E
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAEIL--GRKPIFPG 236
+W APE + NYGT DVWS G + EI+ GR P +PG
Sbjct: 174 IKW-TAPEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 213
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 120/288 (41%), Gaps = 41/288 (14%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKI-NNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
+P+G+G +G V + ++ +A+K + + E + RE+ + H++H N++ +
Sbjct: 21 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 80
Query: 95 KDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ RI YL+ E +L++ ++ F+ +L L Y H
Sbjct: 81 YNYFHDRKRI-----YLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 135
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGT 213
++HRD+KP NLL+ +LKI DFG + + + T Y PE ++ +
Sbjct: 136 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR--RXMCGTLDYLPPE-MIEGKTHDE 192
Query: 214 SIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSL 273
+D+W G + E L P F + I++V DL+F
Sbjct: 193 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-------DLKFP------------ 233
Query: 274 PYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
P + DL+ K+L + P +R+ + ++HP++
Sbjct: 234 ------------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA 269
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 120/288 (41%), Gaps = 41/288 (14%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKI-NNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
+P+G+G +G V + ++ +A+K + + E + RE+ + H++H N++ +
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRM 79
Query: 95 KDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ RI YL+ E +L++ ++ F+ +L L Y H
Sbjct: 80 YNYFHDRKRI-----YLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGT 213
++HRD+KP NLL+ +LKI DFG + + + T Y PE ++ +
Sbjct: 135 VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR--RXMCGTLDYLPPE-MIEGKTHDE 191
Query: 214 SIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSL 273
+D+W G + E L P F + I++V DL+F
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV-------DLKFP------------ 232
Query: 274 PYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYISG 321
P + DL+ K+L + P +R+ + ++HP++
Sbjct: 233 ------------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA 268
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 110 YLVYELMD-TDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNA 168
Y+V E +D L I+ + ++ + + L + H I+HRD+KP N++++A
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 169 NCDLKICDFGLAR--TSRGNEQFMTEYVV-TRWYRAPELLLCCDNYGTSIDVWSVGCIFA 225
+K+ DFG+AR GN T V+ T Y +PE D+ DV+S+GC+
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR-GDSVDARSDVYSLGCVLY 210
Query: 226 EILGRKPIFPG 236
E+L +P F G
Sbjct: 211 EVLTGEPPFTG 221
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 42/292 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
IGRGAYG V +++ + + +A+K+I + + + + V++R ++
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 98 MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHC-----KYFVFQLLRGLKYL-HS 151
+ D ++ ELM T + K S+ +D ++ L +L +
Sbjct: 90 LFREG-----DCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL---LCC 208
I+HRD+KP N+L++ + ++K+CDFG++ + T R Y APE +
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGIS-GQLVDSIAKTRDAGCRPYMAPERIDPSASR 203
Query: 209 DNYGTSIDVWSVGCIFAEI-LGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKAR 267
Y DVWS+G E+ GR P +QL ++ + D + N + R
Sbjct: 204 QGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV-------KGDPPQLSNSEER 256
Query: 268 RFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
F P ++ + L + SKR E L+HP+I
Sbjct: 257 EF-------------------SPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 27/226 (11%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + + + L E
Sbjct: 14 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEA 69
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKY 137
L++ ++H ++ L V ++ + +Y++ E M+ L +K S L+ +
Sbjct: 70 NLMKQLQHQRLVRLYAV------VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 123
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV-- 195
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR NE E
Sbjct: 124 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 183
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAEIL--GRKPIFPG 236
+W APE + NYGT DVWS G + EI+ GR P +PG
Sbjct: 184 IKW-TAPEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 223
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 88/194 (45%), Gaps = 41/194 (21%)
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLV---NANCDLK--ICDFGLART-SRGNEQFMTEYV 194
Q GL +LHS NI+HRDLKP N+L+ NA+ +K I DFGL + + G F
Sbjct: 126 QTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSG 185
Query: 195 V--TRWYRAPELLL--CCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVF 250
V T + APE+L C +N ++D++S GC+F ++ G Q +++
Sbjct: 186 VPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLG-- 243
Query: 251 GTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQA--DPLALDLLQKMLVFEPSKRI 308
+ L+P+ D +A +L++KM+ +P KR
Sbjct: 244 ---------------------------ACSLDCLHPEKHEDVIARELIEKMIAMDPQKRP 276
Query: 309 TVTEALQHPYISGL 322
+ L+HP+ L
Sbjct: 277 SAKHVLKHPFFWSL 290
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 110 YLVYELMD-TDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNA 168
Y+V E +D L I+ + ++ + + L + H I+HRD+KP N++++A
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 169 NCDLKICDFGLAR--TSRGNEQFMTEYVV-TRWYRAPELLLCCDNYGTSIDVWSVGCIFA 225
+K+ DFG+AR GN T V+ T Y +PE D+ DV+S+GC+
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR-GDSVDARSDVYSLGCVLY 210
Query: 226 EILGRKPIFPG 236
E+L +P F G
Sbjct: 211 EVLTGEPPFTG 221
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 110 YLVYELMD-TDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNA 168
Y+V E +D L I+ + ++ + + L + H I+HRD+KP N++++A
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 169 NCDLKICDFGLAR--TSRGNEQFMTEYVV-TRWYRAPELLLCCDNYGTSIDVWSVGCIFA 225
+K+ DFG+AR GN T V+ T Y +PE D+ DV+S+GC+
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR-GDSVDARSDVYSLGCVLY 210
Query: 226 EILGRKPIFPG 236
E+L +P F G
Sbjct: 211 EVLTGEPPFTG 221
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 128/305 (41%), Gaps = 55/305 (18%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN--NVFENRIDALRTLRELVLLRHIKH- 88
Y +K IG G V +N E + AIK +N +D+ R E+ L ++
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQH 114
Query: 89 -DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLK 147
D +I L D + I+ + +Y+V E + DL+ +K +S+ K + +L +
Sbjct: 115 SDKIIRLYD-----YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLAR------------TSRGNEQFMTEYVV 195
+H I+H DLKP N L+ + LK+ DFG+A + G +M +
Sbjct: 170 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCI-FAEILGRKPIFPGTECLNQLKLIISVFGTQQ 254
+ E DVWS+GCI + G+ P + +NQ+ + ++
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQISKLHAIIDPNH 285
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E +EF D P+ K L D+L+ L +P +RI++ E L
Sbjct: 286 E--IEFPDIPE-----KDLQ-------------------DVLKCCLKRDPKQRISIPELL 319
Query: 315 QHPYI 319
HPY+
Sbjct: 320 AHPYV 324
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 27/226 (11%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + + + L E
Sbjct: 6 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEA 61
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKY 137
L++ ++H ++ L V ++ + +Y++ E M+ L +K S L+ +
Sbjct: 62 NLMKQLQHQRLVRLYAV------VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 115
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV-- 195
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR NE E
Sbjct: 116 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 175
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAEIL--GRKPIFPG 236
+W APE + NYGT DVWS G + EI+ GR P +PG
Sbjct: 176 IKW-TAPEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 215
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 110 YLVYELMD-TDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNA 168
Y+V E +D L I+ + ++ + + L + H I+HRD+KP N++++A
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 169 NCDLKICDFGLAR--TSRGNEQFMTEYVV-TRWYRAPELLLCCDNYGTSIDVWSVGCIFA 225
+K+ DFG+AR GN T V+ T Y +PE D+ DV+S+GC+
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR-GDSVDARSDVYSLGCVLY 210
Query: 226 EILGRKPIFPG 236
E+L +P F G
Sbjct: 211 EVLTGEPPFTG 221
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 109/234 (46%), Gaps = 48/234 (20%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSSINRETNEK---VAIK--KINNVFENRIDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 97
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDH-CKYFV 139
++ H N+I L+ V+ + K V +V E M+ S S H ++ V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRKHDAQFTV 146
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------T 182
QL+ G+KYL +HRDL N+L+N+N K+ DFGLAR T
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT 206
Query: 183 SRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
+RG + + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 207 TRGGK------IPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 128/305 (41%), Gaps = 55/305 (18%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN--NVFENRIDALRTLRELVLLRHIKH- 88
Y +K IG G V +N E + AIK +N +D+ R E+ L ++
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQH 86
Query: 89 -DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLK 147
D +I L D + I+ + +Y+V E + DL+ +K +S+ K + +L +
Sbjct: 87 SDKIIRLYD-----YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 141
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLAR------------TSRGNEQFMTEYVV 195
+H I+H DLKP N L+ + LK+ DFG+A + G +M +
Sbjct: 142 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 200
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCI-FAEILGRKPIFPGTECLNQLKLIISVFGTQQ 254
+ E DVWS+GCI + G+ P + +NQ+ + ++
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQISKLHAIIDPNH 257
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E +EF D P+ K L D+L+ L +P +RI++ E L
Sbjct: 258 E--IEFPDIPE-----KDLQ-------------------DVLKCCLKRDPKQRISIPELL 291
Query: 315 QHPYI 319
HPY+
Sbjct: 292 AHPYV 296
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 83 C--TREPPF---YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE-SLAYNKF 194
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
DVW+ G + EI G P +PG +
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSP-YPGID 222
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 27/226 (11%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + + + L E
Sbjct: 4 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEA 59
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKY 137
L++ ++H ++ L V ++ + +Y++ E M+ L +K S L+ +
Sbjct: 60 NLMKQLQHQRLVRLYAV------VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV-- 195
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR NE E
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAEIL--GRKPIFPG 236
+W APE + NYGT DVWS G + EI+ GR P +PG
Sbjct: 174 IKW-TAPEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 213
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 27/226 (11%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + + + L E
Sbjct: 5 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEA 60
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKY 137
L++ ++H ++ L V ++ + +Y++ E M+ L +K S L+ +
Sbjct: 61 NLMKQLQHQRLVRLYAV------VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 114
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV-- 195
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR NE E
Sbjct: 115 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 174
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAEIL--GRKPIFPG 236
+W APE + NYGT DVWS G + EI+ GR P +PG
Sbjct: 175 IKW-TAPEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 214
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 128/305 (41%), Gaps = 55/305 (18%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN--NVFENRIDALRTLRELVLLRHIKH- 88
Y +K IG G V +N E + AIK +N +D+ R E+ L ++
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQH 114
Query: 89 -DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLK 147
D +I L D + I+ + +Y+V E + DL+ +K +S+ K + +L +
Sbjct: 115 SDKIIRLYD-----YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLAR------------TSRGNEQFMTEYVV 195
+H I+H DLKP N L+ + LK+ DFG+A + G +M +
Sbjct: 170 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 228
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCI-FAEILGRKPIFPGTECLNQLKLIISVFGTQQ 254
+ E DVWS+GCI + G+ P + +NQ+ + ++
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQISKLHAIIDPNH 285
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E +EF D P+ K L D+L+ L +P +RI++ E L
Sbjct: 286 E--IEFPDIPE-----KDLQ-------------------DVLKCCLKRDPKQRISIPELL 319
Query: 315 QHPYI 319
HPY+
Sbjct: 320 AHPYV 324
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 32/227 (14%)
Query: 27 EIDTKYVPIKP-IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVL 82
EID YV I+ IG G +G VC + +K VAIK + + R L E +
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTER-QRREFLSEASI 68
Query: 83 LRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ +H N+I L+ V+ + + ++ +D+ L ND ++ V QL
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRL---------NDG-QFTVIQL 118
Query: 143 L-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNE------QF 189
+ G++YL + +HRDL N+LVN+N K+ DFGL+R N
Sbjct: 119 VGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSS 178
Query: 190 MTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
+ + RW APE + + ++ D WS G + E++ G +P +
Sbjct: 179 LGGKIPIRW-TAPE-AIAFRKFTSASDAWSYGIVMWEVMSFGERPYW 223
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 83 C--TREPPF---YIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 194
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
DVW+ G + EI G P +PG +
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSP-YPGID 222
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 79 C--TREPPF---YIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE-SLAYNKF 190
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
DVW+ G + EI G P +PG +
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSP-YPGID 218
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 132/305 (43%), Gaps = 55/305 (18%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN--NVFENRIDALRTLRELVLLRHIKH- 88
Y +K IG G V +N E + AIK +N +D+ R E+ L ++
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQH 86
Query: 89 -DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLK 147
D +I L D + I+ + +Y+V E + DL+ +K +S+ K + +L +
Sbjct: 87 SDKIIRLYD-----YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 141
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE--YVVTRWYRAPELL 205
+H I+H DLKP N L+ + LK+ DFG+A + + + + V T Y PE +
Sbjct: 142 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAI 200
Query: 206 LCCDN----------YGTSIDVWSVGCI-FAEILGRKPIFPGTECLNQLKLIISVFGTQQ 254
+ DVWS+GCI + G+ P + +NQ+ + ++
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQISKLHAIIDPNH 257
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E +EF D P+ K L D+L+ L +P +RI++ E L
Sbjct: 258 E--IEFPDIPE-----KDLQ-------------------DVLKCCLKRDPKQRISIPELL 291
Query: 315 QHPYI 319
HPY+
Sbjct: 292 AHPYV 296
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 27/226 (11%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + + + L E
Sbjct: 10 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEA 65
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKY 137
L++ ++H ++ L V ++ + +Y++ E M+ L +K S L+ +
Sbjct: 66 NLMKQLQHQRLVRLYAV------VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV-- 195
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR NE E
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 179
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAEIL--GRKPIFPG 236
+W APE + NYGT DVWS G + EI+ GR P +PG
Sbjct: 180 IKW-TAPEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 219
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 82 C--TREPPF---YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 136
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 193
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLKLI 246
DVW+ G + EI G P +PG + +L+
Sbjct: 194 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 229
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 83 C--TREPPF---YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 194
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPG 236
DVW+ G + EI G P +PG
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSP-YPG 220
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 128/305 (41%), Gaps = 55/305 (18%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN--NVFENRIDALRTLRELVLLRHIKH- 88
Y +K IG G V +N E + AIK +N +D+ R E+ L ++
Sbjct: 14 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQH 70
Query: 89 -DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLK 147
D +I L D + I+ + +Y+V E + DL+ +K +S+ K + +L +
Sbjct: 71 SDKIIRLYD-----YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 125
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLAR------------TSRGNEQFMTEYVV 195
+H I+H DLKP N L+ + LK+ DFG+A + G +M +
Sbjct: 126 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 184
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCI-FAEILGRKPIFPGTECLNQLKLIISVFGTQQ 254
+ E DVWS+GCI + G+ P + +NQ+ + ++
Sbjct: 185 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQISKLHAIIDPNH 241
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E +EF D P+ K L D+L+ L +P +RI++ E L
Sbjct: 242 E--IEFPDIPE-----KDLQ-------------------DVLKCCLKRDPKQRISIPELL 275
Query: 315 QHPYI 319
HPY+
Sbjct: 276 AHPYV 280
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 94/201 (46%), Gaps = 7/201 (3%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
+ ++ IG+G++G V I+ T + VAIK I+ + E + +E+ +L V
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIID-LEEAEDEIEDIQQEITVLSQCDSSYV 83
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
+ ++ +++ E + + + + ++L+GL YLHS
Sbjct: 84 TKYYGSYLKGSKL-----WIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHS 138
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
+HRD+K N+L++ D+K+ DFG+A + +V T ++ APE++ Y
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQS-AY 197
Query: 212 GTSIDVWSVGCIFAEILGRKP 232
+ D+WS+G E+ +P
Sbjct: 198 DSKADIWSLGITAIELAKGEP 218
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 27/226 (11%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + + + L E
Sbjct: 9 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEA 64
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKY 137
L++ ++H ++ L V ++ + +Y++ E M+ L +K S L+ +
Sbjct: 65 NLMKQLQHQRLVRLYAV------VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 118
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV-- 195
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR NE E
Sbjct: 119 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 178
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAEIL--GRKPIFPG 236
+W APE + NYGT DVWS G + EI+ GR P +PG
Sbjct: 179 IKW-TAPEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 110 YLVYELMD-TDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNA 168
Y+V E +D L I+ + ++ + + L + H I+HRD+KP N++++A
Sbjct: 109 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 168
Query: 169 NCDLKICDFGLAR--TSRGNEQFMTEYVV-TRWYRAPELLLCCDNYGTSIDVWSVGCIFA 225
+K+ DFG+AR GN T V+ T Y +PE D+ DV+S+GC+
Sbjct: 169 TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR-GDSVDARSDVYSLGCVLY 227
Query: 226 EILGRKPIFPG 236
E+L +P F G
Sbjct: 228 EVLTGEPPFTG 238
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 83 C--TREPPF---YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 194
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPG 236
DVW+ G + EI G P +PG
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSP-YPG 220
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 128/305 (41%), Gaps = 55/305 (18%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN--NVFENRIDALRTLRELVLLRHIKH- 88
Y +K IG G V +N E + AIK +N +D+ R E+ L ++
Sbjct: 11 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQH 67
Query: 89 -DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLK 147
D +I L D + I+ + +Y+V E + DL+ +K +S+ K + +L +
Sbjct: 68 SDKIIRLYD-----YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 122
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLAR------------TSRGNEQFMTEYVV 195
+H I+H DLKP N L+ + LK+ DFG+A + G +M +
Sbjct: 123 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 181
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCI-FAEILGRKPIFPGTECLNQLKLIISVFGTQQ 254
+ E DVWS+GCI + G+ P + +NQ+ + ++
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQISKLHAIIDPNH 238
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E +EF D P+ K L D+L+ L +P +RI++ E L
Sbjct: 239 E--IEFPDIPE-----KDLQ-------------------DVLKCCLKRDPKQRISIPELL 272
Query: 315 QHPYI 319
HPY+
Sbjct: 273 AHPYV 277
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G +G V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q +S Y Q+ ++YL N
Sbjct: 76 C--TREPPF---YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTX--TAHAGAKFPIKWTAPE-SLAYNKF 187
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPG 236
DVW+ G + EI G P +PG
Sbjct: 188 SIKSDVWAFGVLLWEIATYGMSP-YPG 213
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 27/209 (12%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
++ +G+G +G V C + T E VA+KK+ + E + RE+ +L+ ++HDN
Sbjct: 16 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 73
Query: 91 VIALKDVMMPTHRISFKDV--YLVYELMDTDLHQIIKSSQSLSNDHCKYFVF--QLLRGL 146
++ K V R + K + YL Y + L K + + DH K + Q+ +G+
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERI--DHIKLLQYTSQICKGM 128
Query: 147 KYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTR-------WY 199
+YL + +HR+L N+LV +KI DFGL + ++++ Y V WY
Sbjct: 129 EYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEY---YKVKEPGESPIFWY 185
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEIL 228
APE L + + DVWS G + E+
Sbjct: 186 -APE-SLTESKFSVASDVWSFGVVLYELF 212
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 9/204 (4%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIK--KINNVFENRIDALRTLRELVLLRHIKHDNVIALK 95
+G+G++G V + + T E AIK K + V ++ + + VL K + L
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLH 86
Query: 96 DVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
R+ Y V E ++ DL I+ ++ ++ GL +LH I
Sbjct: 87 SCFQTVDRL-----YFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGI 141
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTS 214
++RDLK N+++++ +KI DFG+ + + E+ T Y APE ++ YG S
Sbjct: 142 IYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPE-IIAYQPYGKS 200
Query: 215 IDVWSVGCIFAEILGRKPIFPGTE 238
+D W+ G + E+L +P F G +
Sbjct: 201 VDWWAYGVLLYEMLAGQPPFDGED 224
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 78 C--TREPPF---YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 189
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
DVW+ G + EI G P +PG +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP-YPGID 217
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 128/305 (41%), Gaps = 55/305 (18%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN--NVFENRIDALRTLRELVLLRHIKH- 88
Y +K IG G V +N E + AIK +N +D+ R E+ L ++
Sbjct: 10 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQH 66
Query: 89 -DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLK 147
D +I L D + I+ + +Y+V E + DL+ +K +S+ K + +L +
Sbjct: 67 SDKIIRLYD-----YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 121
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLAR------------TSRGNEQFMTEYVV 195
+H I+H DLKP N L+ + LK+ DFG+A + G +M +
Sbjct: 122 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAI 180
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCI-FAEILGRKPIFPGTECLNQLKLIISVFGTQQ 254
+ E DVWS+GCI + G+ P + +NQ+ + ++
Sbjct: 181 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQISKLHAIIDPNH 237
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E +EF D P+ K L D+L+ L +P +RI++ E L
Sbjct: 238 E--IEFPDIPE-----KDLQ-------------------DVLKCCLKRDPKQRISIPELL 271
Query: 315 QHPYI 319
HPY+
Sbjct: 272 AHPYV 276
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 128/312 (41%), Gaps = 61/312 (19%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 97
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 98 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 152
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 153 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 210
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQ 254
TR Y PE + +G S VWS+G + +++ G P
Sbjct: 211 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--------------------- 249
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E D E I + + F + S H L++ L PS R T E
Sbjct: 250 EHDEEII---RGQVFFRQRVSSECQH--------------LIRWCLALRPSDRPTFEEIQ 292
Query: 315 QHPYISGLYDPQ 326
HP++ + PQ
Sbjct: 293 NHPWMQDVLLPQ 304
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 91 C--TREPPF---YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 145
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 202
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPG 236
DVW+ G + EI G P +PG
Sbjct: 203 SIKSDVWAFGVLLWEIATYGMSP-YPG 228
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 128/312 (41%), Gaps = 61/312 (19%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 63
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 64 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 118
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 119 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 176
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQ 254
TR Y PE + +G S VWS+G + +++ G P
Sbjct: 177 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--------------------- 215
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E D E I + + F + S H L++ L PS R T E
Sbjct: 216 EHDEEII---RGQVFFRQRVSSECQH--------------LIRWCLALRPSDRPTFEEIQ 258
Query: 315 QHPYISGLYDPQ 326
HP++ + PQ
Sbjct: 259 NHPWMQDVLLPQ 270
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 78 C--TREPPF---YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 189
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
DVW+ G + EI G P +PG +
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSP-YPGID 217
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 107/226 (47%), Gaps = 27/226 (11%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLREL 80
W+ +E+ + + ++ +G G +G V + KVA+K + + + L E
Sbjct: 4 WEDEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEA 59
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKY 137
L++ ++H ++ L V ++ + +Y++ E M+ L +K S L+ +
Sbjct: 60 NLMKQLQHQRLVRLYAV------VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV-- 195
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR NE E
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 173
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAEIL--GRKPIFPG 236
+W APE + NYGT DVWS G + EI+ GR P +PG
Sbjct: 174 IKW-TAPEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 213
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 128/305 (41%), Gaps = 55/305 (18%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKIN--NVFENRIDALRTLRELVLLRHIKH- 88
Y +K IG G V +N E + AIK +N +D+ R E+ L ++
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRN--EIAYLNKLQQH 114
Query: 89 -DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLK 147
D +I L D + I+ + +Y+V E + DL+ +K +S+ K + +L +
Sbjct: 115 SDKIIRLYD-----YEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 148 YLHSANILHRDLKPGNLLVNANCDLKICDFGLAR------------TSRGNEQFMTEYVV 195
+H I+H DLKP N L+ + LK+ DFG+A + G +M +
Sbjct: 170 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAI 228
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCI-FAEILGRKPIFPGTECLNQLKLIISVFGTQQ 254
+ E DVWS+GCI + G+ P + +NQ+ + ++
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQISKLHAIIDPNH 285
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E +EF D P+ K L D+L+ L +P +RI++ E L
Sbjct: 286 E--IEFPDIPE-----KDLQ-------------------DVLKCCLKRDPKQRISIPELL 319
Query: 315 QHPYI 319
HPY+
Sbjct: 320 AHPYV 324
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 48/234 (20%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSSINRETNEK---VAIK--KINNVFENRIDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 97
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDH-CKYFV 139
++ H N+I L+ V+ + K V +V E M+ S S H ++ V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRKHDAQFTV 146
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------T 182
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R T
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 183 SRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
+RG + + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 207 TRGGK------IPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 128/312 (41%), Gaps = 61/312 (19%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 105
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 106 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 160
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 161 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 218
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQ 254
TR Y PE + +G S VWS+G + +++ G P
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--------------------- 257
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E D E I + + F + S H L++ L PS R T E
Sbjct: 258 EHDEEII---RGQVFFRQRVSSECQH--------------LIRWCLALRPSDRPTFEEIQ 300
Query: 315 QHPYISGLYDPQ 326
HP++ + PQ
Sbjct: 301 NHPWMQDVLLPQ 312
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 80 C--TREPPF---YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 191
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPG 236
DVW+ G + EI G P +PG
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSP-YPG 217
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 34/219 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IK IGRGA+G +VA+ K+ N RI A++ L + +L+ +
Sbjct: 95 IKVIGRGAFG------------EVAVVKMKNT--ERIYAMKILNKWEMLKRAETACFREE 140
Query: 95 KDVM-------MPTHRISFKDVYLVYELMD----TDLHQII-KSSQSLSNDHCKYFVFQL 142
+DV+ + +F+D +Y +MD DL ++ K L D ++++ ++
Sbjct: 141 RDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEM 200
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFG--LARTSRGNEQFMTEYVVTRWYR 200
+ + +H + +HRD+KP N+L++ N +++ DFG L G Q + V T Y
Sbjct: 201 VLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQ-SSVAVGTPDYI 259
Query: 201 APELLLCCDN----YGTSIDVWSVG-CIFAEILGRKPIF 234
+PE+L ++ YG D WS+G C++ + G P +
Sbjct: 260 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 298
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 80 C--TREPPF---YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HRDL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 191
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPG 236
DVW+ G + EI G P +PG
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSP-YPG 217
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 128/312 (41%), Gaps = 61/312 (19%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 63
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 64 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 118
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 119 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 176
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQ 254
TR Y PE + +G S VWS+G + +++ G P
Sbjct: 177 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--------------------- 215
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E D E I + + F + S H L++ L PS R T E
Sbjct: 216 EHDEEII---RGQVFFRQRVSSECQH--------------LIRWCLALRPSDRPTFEEIQ 258
Query: 315 QHPYISGLYDPQ 326
HP++ + PQ
Sbjct: 259 NHPWMQDVLLPQ 270
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 34/219 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IK IGRGA+G +VA+ K+ N RI A++ L + +L+ +
Sbjct: 79 IKVIGRGAFG------------EVAVVKMKNT--ERIYAMKILNKWEMLKRAETACFREE 124
Query: 95 KDVM-------MPTHRISFKDVYLVYELMD----TDLHQII-KSSQSLSNDHCKYFVFQL 142
+DV+ + +F+D +Y +MD DL ++ K L D ++++ ++
Sbjct: 125 RDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEM 184
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFG--LARTSRGNEQFMTEYVVTRWYR 200
+ + +H + +HRD+KP N+L++ N +++ DFG L G Q + V T Y
Sbjct: 185 VLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQ-SSVAVGTPDYI 243
Query: 201 APELLLCCDN----YGTSIDVWSVG-CIFAEILGRKPIF 234
+PE+L ++ YG D WS+G C++ + G P +
Sbjct: 244 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 282
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 48/234 (20%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSSINRETNEK---VAIK--KINNVFENRIDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 97
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDH-CKYFV 139
++ H N+I L+ V+ + K V +V E M+ S S H ++ V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEXMENG------SLDSFLRKHDAQFTV 146
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------T 182
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R T
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 183 SRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
+RG + + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 207 TRGGK------IPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 128/312 (41%), Gaps = 61/312 (19%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 78
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 79 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 133
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 134 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 191
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQ 254
TR Y PE + +G S VWS+G + +++ G P
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--------------------- 230
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E D E I + + F + S H L++ L PS R T E
Sbjct: 231 EHDEEII---RGQVFFRQRVSSECQH--------------LIRWCLALRPSDRPTFEEIQ 273
Query: 315 QHPYISGLYDPQ 326
HP++ + PQ
Sbjct: 274 NHPWMQDVLLPQ 285
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 128/312 (41%), Gaps = 61/312 (19%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 58
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 59 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 113
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 114 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 171
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQ 254
TR Y PE + +G S VWS+G + +++ G P
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--------------------- 210
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E D E I + + F + S H L++ L PS R T E
Sbjct: 211 EHDEEII---RGQVFFRQRVSSECQH--------------LIRWCLALRPSDRPTFEEIQ 253
Query: 315 QHPYISGLYDPQ 326
HP++ + PQ
Sbjct: 254 NHPWMQDVLLPQ 265
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 128/312 (41%), Gaps = 61/312 (19%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 77
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 78 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 132
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 133 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 190
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQ 254
TR Y PE + +G S VWS+G + +++ G P
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--------------------- 229
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E D E I + + F + S H L++ L PS R T E
Sbjct: 230 EHDEEII---RGQVFFRQRVSSECQH--------------LIRWCLALRPSDRPTFEEIQ 272
Query: 315 QHPYISGLYDPQ 326
HP++ + PQ
Sbjct: 273 NHPWMQDVLLPQ 284
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 128/312 (41%), Gaps = 61/312 (19%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 62
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 63 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 117
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 118 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 175
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQ 254
TR Y PE + +G S VWS+G + +++ G P
Sbjct: 176 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--------------------- 214
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E D E I + + F + S H L++ L PS R T E
Sbjct: 215 EHDEEII---RGQVFFRQRVSSECQH--------------LIRWCLALRPSDRPTFEEIQ 257
Query: 315 QHPYISGLYDPQ 326
HP++ + PQ
Sbjct: 258 NHPWMQDVLLPQ 269
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 128/312 (41%), Gaps = 61/312 (19%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 5 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 61
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 62 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 116
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 117 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 174
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQ 254
TR Y PE + +G S VWS+G + +++ G P
Sbjct: 175 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--------------------- 213
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E D E I + + F + S H L++ L PS R T E
Sbjct: 214 EHDEEII---RGQVFFRQRVSSECQH--------------LIRWCLALRPSDRPTFEEIQ 256
Query: 315 QHPYISGLYDPQ 326
HP++ + PQ
Sbjct: 257 NHPWMQDVLLPQ 268
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 128/312 (41%), Gaps = 61/312 (19%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 63
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 64 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 118
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 119 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 176
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQ 254
TR Y PE + +G S VWS+G + +++ G P
Sbjct: 177 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--------------------- 215
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E D E I + + F + S H L++ L PS R T E
Sbjct: 216 EHDEEII---RGQVFFRQRVSSECQH--------------LIRWCLALRPSDRPTFEEIQ 258
Query: 315 QHPYISGLYDPQ 326
HP++ + PQ
Sbjct: 259 NHPWMQDVLLPQ 270
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 128/312 (41%), Gaps = 61/312 (19%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 90
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 145
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 146 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 203
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQ 254
TR Y PE + +G S VWS+G + +++ G P
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--------------------- 242
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E D E I + + F + S H L++ L PS R T E
Sbjct: 243 EHDEEII---RGQVFFRQRVSSECQH--------------LIRWCLALRPSDRPTFEEIQ 285
Query: 315 QHPYISGLYDPQ 326
HP++ + PQ
Sbjct: 286 NHPWMQDVLLPQ 297
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 111/239 (46%), Gaps = 11/239 (4%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
IGRG++ V ++ ET +VA ++ + + + R E L+ ++H N++ D
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 98 MMPTHRISFKDVYLVYELMDTD-LHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSAN--I 154
T + K + LV EL + L +K + + + Q+L+GL++LH+ I
Sbjct: 94 WESTVK-GKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPI 152
Query: 155 LHRDLKPGNLLVNA-NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGT 213
+HRDLK N+ + +KI D GLA R + F + T + APE + Y
Sbjct: 153 IHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS--FAKAVIGTPEFXAPEXYE--EKYDE 208
Query: 214 SIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
S+DV++ G E + +P +EC N ++ V + A + + P+ + I+
Sbjct: 209 SVDVYAFGXCXLEXATSE--YPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEG 265
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
++ +G+G +G V C + T E VA+KK+ + E + RE+ +L+ ++HDN
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 75
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVF--QLLRGLKY 148
++ K V R + K L+ E + + + + DH K + Q+ +G++Y
Sbjct: 76 IVKYKGVCYSAGRRNLK---LIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEY 132
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTR----WYRAPEL 204
L + +HRDL N+LV +KI DFGL + +++ WY APE
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE- 190
Query: 205 LLCCDNYGTSIDVWSVGCIFAEIL 228
L + + DVWS G + E+
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELF 214
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 94/201 (46%), Gaps = 7/201 (3%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
+ + IG+G++G V I+ T E VAIK I ++ E + +E+ +L +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
+ + ++ +++ E + + L + + ++L+GL YLHS
Sbjct: 80 TRYFGSYLKSTKL-----WIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHS 134
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
+HRD+K N+L++ D+K+ DFG+A + +V T ++ APE++ Y
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS-AY 193
Query: 212 GTSIDVWSVGCIFAEILGRKP 232
D+WS+G E+ +P
Sbjct: 194 DFKADIWSLGITAIELAKGEP 214
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 48/234 (20%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSSINRETNEK---VAIK--KINNVFENRIDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 68
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDH-CKYFV 139
++ H N+I L+ V+ + K V +V E M+ S S H ++ V
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEXMENG------SLDSFLRKHDAQFTV 117
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------T 182
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R T
Sbjct: 118 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 183 SRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
+RG + + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 178 TRGGK------IPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 223
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
IG G++G V + ++ V I + R++ LRE+ +++ ++H N++
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEF--LREVAIMKRLRHPNIVLFMGA 102
Query: 98 MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSAN--IL 155
+ +S YL + LH+ + + L + + +G+ YLH+ N I+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 156 HRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSI 215
HRDLK NLLV+ +K+CDFGL+R T + APE+L + S
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKS- 220
Query: 216 DVWSVGCIFAEI 227
DV+S G I E+
Sbjct: 221 DVYSFGVILWEL 232
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 48/234 (20%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSSINRETNEK---VAIK--KINNVFENRIDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 97
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDH-CKYFV 139
++ H N+I L+ V+ + K V +V E M+ S S H ++ V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEXMENG------SLDSFLRKHDAQFTV 146
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------T 182
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R T
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 183 SRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
+RG + + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 207 TRGGK------IPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
++ +G+G +G V C + T E VA+KK+ + E + RE+ +L+ ++HDN
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 103
Query: 91 VIALKDVMMPTHRISFKDV--YLVYELMDTDLHQIIKSSQSLSNDHCKYFVF--QLLRGL 146
++ K V R + K + YL Y + L K + + DH K + Q+ +G+
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERI--DHIKLLQYTSQICKGM 158
Query: 147 KYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTR----WYRAP 202
+YL + +HRDL N+LV +KI DFGL + +++ WY AP
Sbjct: 159 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-AP 217
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEIL 228
E L + + DVWS G + E+
Sbjct: 218 E-SLTESKFSVASDVWSFGVVLYELF 242
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 48/234 (20%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSSINRETNEK---VAIK--KINNVFENRIDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD---FLGEA 85
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDH-CKYFV 139
++ H N+I L+ V+ + K V +V E M+ S S H ++ V
Sbjct: 86 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRKHDAQFTV 134
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------T 182
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R T
Sbjct: 135 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 183 SRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
+RG + + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 195 TRGGK------IPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 240
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 48/234 (20%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSSINRETNEK---VAIK--KINNVFENRIDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 68
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDH-CKYFV 139
++ H N+I L+ V+ + K V +V E M+ S S H ++ V
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRKHDAQFTV 117
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------T 182
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R T
Sbjct: 118 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 183 SRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
+RG + + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 178 TRGGK------IPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 223
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 48/234 (20%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSSINRETNEK---VAIK--KINNVFENRIDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 97
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDH-CKYFV 139
++ H N+I L+ V+ + K V +V E M+ S S H ++ V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRKHDAQFTV 146
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------T 182
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R T
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 183 SRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
+RG + + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 207 TRGGK------IPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 130/293 (44%), Gaps = 47/293 (16%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
+ ++ IG+G++G V I+ T + VAIK I ++ E + +E+ +L V
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYV 82
Query: 92 IA-----LKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGL 146
LKD + +++ E + + L + ++L+GL
Sbjct: 83 TKYYGSYLKDTKL----------WIIMEYLGGGSALDLLEPGPLDETQIATILREILKGL 132
Query: 147 KYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLL 206
YLHS +HRD+K N+L++ + ++K+ DFG+A + +V T ++ APE++
Sbjct: 133 DYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIK 192
Query: 207 CCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKA 266
Y + D+WS+G E+ +P P +E L+ +K++ + +NP
Sbjct: 193 QS-AYDSKADIWSLGITAIELARGEP--PHSE-LHPMKVLFLIPK----------NNP-- 236
Query: 267 RRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
P G + + PL + ++ L EPS R T E L+H +I
Sbjct: 237 -------PTLEGNY-------SKPLK-EFVEACLNKEPSFRPTAKELLKHKFI 274
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 48/234 (20%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSSINRETNEK---VAIK--KINNVFENRIDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 97
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDH-CKYFV 139
++ H N+I L+ V+ + K V +V E M+ S S H ++ V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRKHDAQFTV 146
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------T 182
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R T
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 183 SRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
+RG + + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 207 TRGGK------IPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 48/234 (20%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSSINRETNEK---VAIK--KINNVFENRIDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 97
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDH-CKYFV 139
++ H N+I L+ V+ + K V +V E M+ S S H ++ V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRKHDAQFTV 146
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------T 182
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R T
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 183 SRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
+RG + + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 207 TRGGK------IPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
++ +G+G +G V C + T E VA+KK+ + E + RE+ +L+ ++HDN
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 70
Query: 91 VIALKDVMMPTHRISFKDV--YLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
++ K V R + K + YL Y + L K + + + + Q+ +G++Y
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEY 127
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTR----WYRAPEL 204
L + +HRDL N+LV +KI DFGL + +++ WY APE
Sbjct: 128 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE- 185
Query: 205 LLCCDNYGTSIDVWSVGCIFAEIL 228
L + + DVWS G + E+
Sbjct: 186 SLTESKFSVASDVWSFGVVLYELF 209
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ +G G +G V + KVA+K + + + L E L++ ++H ++ L
Sbjct: 13 VERLGAGQFGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRL 68
Query: 95 KDVMMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHS 151
V ++ + +Y++ E M+ L +K S L+ + Q+ G+ ++
Sbjct: 69 YAV------VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 122
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV--TRWYRAPELLLCCD 209
N +HRDL+ N+LV+ KI DFGLAR NE E +W APE +
Sbjct: 123 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW-TAPEAI---- 177
Query: 210 NYGT---SIDVWSVGCIFAEIL--GRKPIFPG 236
NYGT DVWS G + EI+ GR P +PG
Sbjct: 178 NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 208
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 48/234 (20%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSSINRETNEK---VAIK--KINNVFENRIDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 97
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDH-CKYFV 139
++ H N+I L+ V+ + K V +V E M+ S S H ++ V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRKHDAQFTV 146
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------T 182
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R T
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 183 SRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
+RG + + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 207 TRGGK------IPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
++ +G+G +G V C + T E VA+KK+ + E + RE+ +L+ ++HDN
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 72
Query: 91 VIALKDVMMPTHRISFKDV--YLVYELMDTDLHQIIKSSQSLSNDHCKYFVF--QLLRGL 146
++ K V R + K + YL Y + L K + + DH K + Q+ +G+
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERI--DHIKLLQYTSQICKGM 127
Query: 147 KYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTR----WYRAP 202
+YL + +HRDL N+LV +KI DFGL + +++ WY AP
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-AP 186
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEIL 228
E L + + DVWS G + E+
Sbjct: 187 E-SLTESKFSVASDVWSFGVVLYELF 211
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 48/234 (20%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSSINRETNEK---VAIK--KINNVFENRIDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 95
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDH-CKYFV 139
++ H N+I L+ V+ + K V +V E M+ S S H ++ V
Sbjct: 96 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRKHDAQFTV 144
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------T 182
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R T
Sbjct: 145 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 204
Query: 183 SRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
+RG + + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 205 TRGGK------IPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 250
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 17/204 (8%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
++ +G+G +G V C + T E VA+KK+ + E + RE+ +L+ ++HDN
Sbjct: 18 LRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 75
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVF--QLLRGLKY 148
++ K V R + K L+ E + + DH K + Q+ +G++Y
Sbjct: 76 IVKYKGVCYSAGRRNLK---LIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTR----WYRAPEL 204
L + +HRDL N+LV +KI DFGL + +++ WY APE
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE- 190
Query: 205 LLCCDNYGTSIDVWSVGCIFAEIL 228
L + + DVWS G + E+
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELF 214
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
++ +G+G +G V C + T E VA+KK+ + E + RE+ +L+ ++HDN
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 75
Query: 91 VIALKDVMMPTHRISFKDV--YLVYELMDTDLHQIIKSSQSLSNDHCKYFVF--QLLRGL 146
++ K V R + K + YL Y + L K + + DH K + Q+ +G+
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERI--DHIKLLQYTSQICKGM 130
Query: 147 KYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTR----WYRAP 202
+YL + +HRDL N+LV +KI DFGL + +++ WY AP
Sbjct: 131 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-AP 189
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEIL 228
E L + + DVWS G + E+
Sbjct: 190 E-SLTESKFSVASDVWSFGVVLYELF 214
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 37/288 (12%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
+ ++ IG+G++G V I+ T + VAIK I ++ E + +E+ +L V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
+ ++ +++ E + + L + ++L+GL YLHS
Sbjct: 68 TKYYGSYLKDTKL-----WIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS 122
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
+HRD+K N+L++ + ++K+ DFG+A + +V T ++ APE++ Y
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS-AY 181
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+ D+WS+G E+ +P P +E L+ +K++ + +NP
Sbjct: 182 DSKADIWSLGITAIELARGEP--PHSE-LHPMKVLFLIPK----------NNP------- 221
Query: 272 SLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
P G + + PL + ++ L EPS R T E L+H +I
Sbjct: 222 --PTLEGNY-------SKPLK-EFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
++ +G+G +G V C + T E VA+KK+ + E + RE+ +L+ ++HDN
Sbjct: 21 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 78
Query: 91 VIALKDVMMPTHRISFKDV--YLVYELMDTDLHQIIKSSQSLSNDHCKYFVF--QLLRGL 146
++ K V R + K + YL Y + L K + + DH K + Q+ +G+
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERI--DHIKLLQYTSQICKGM 133
Query: 147 KYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTR----WYRAP 202
+YL + +HRDL N+LV +KI DFGL + +++ WY AP
Sbjct: 134 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-AP 192
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEIL 228
E L + + DVWS G + E+
Sbjct: 193 E-SLTESKFSVASDVWSFGVVLYELF 217
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
++ +G+G +G V C + T E VA+KK+ + E + RE+ +L+ ++HDN
Sbjct: 19 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 76
Query: 91 VIALKDVMMPTHRISFKDV--YLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
++ K V R + K + YL Y + L K + + + + Q+ +G++Y
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEY 133
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTR----WYRAPEL 204
L + +HRDL N+LV +KI DFGL + +++ WY APE
Sbjct: 134 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE- 191
Query: 205 LLCCDNYGTSIDVWSVGCIFAEIL 228
L + + DVWS G + E+
Sbjct: 192 SLTESKFSVASDVWSFGVVLYELF 215
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 42/231 (18%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVL 82
EID + I K IG G +G VCS + ++ VAIK + + ++ L E +
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASI 83
Query: 83 LRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ H N+I L+ V+ K V ++ E M+ L + ++ V QL
Sbjct: 84 MGQFDHPNIIHLEGVVTKC-----KPVMIITEYMENGSLDAF-----LRKNDGRFTVIQL 133
Query: 143 L-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------TSRG 185
+ G+KYL + +HRDL N+LVN+N K+ DFG++R T+RG
Sbjct: 134 VGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 193
Query: 186 NEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
+ + RW APE + + ++ DVWS G + E++ G +P +
Sbjct: 194 GK------IPIRWT-APE-AIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 236
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 17/204 (8%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
++ +G+G +G V C + T E VA+KK+ + E + RE+ +L+ ++HDN
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 71
Query: 91 VIALKDVMMPTHRISFKDV--YLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
++ K V R + K + YL Y + L K + + + + Q+ +G++Y
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERIDHIKLLQYTSQICKGMEY 128
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTR----WYRAPEL 204
L + +HRDL N+LV +KI DFGL + +++ WY APE
Sbjct: 129 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APE- 186
Query: 205 LLCCDNYGTSIDVWSVGCIFAEIL 228
L + + DVWS G + E+
Sbjct: 187 SLTESKFSVASDVWSFGVVLYELF 210
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 108/234 (46%), Gaps = 48/234 (20%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSSINRETNEK---VAIK--KINNVFENRIDALRTLREL 80
E+D + I K +G G +G VCS + ++K VAIK K+ + R D L E
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG---EA 97
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDH-CKYFV 139
++ H N+I L+ V+ + K V +V E M+ S S H ++ V
Sbjct: 98 SIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENG------SLDSFLRKHDAQFTV 146
Query: 140 FQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------T 182
QL+ G+KYL +HRDL N+L+N+N K+ DFGL R T
Sbjct: 147 IQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206
Query: 183 SRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
+RG + + RW +PE + + ++ DVWS G + E++ G +P +
Sbjct: 207 TRGGK------IPIRW-TSPE-AIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 129/288 (44%), Gaps = 37/288 (12%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
+ ++ IG+G++G V I+ T + VAIK I ++ E + +E+ +L V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYV 67
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
+ ++ +++ E + + L + ++L+GL YLHS
Sbjct: 68 TKYYGSYLKDTKL-----WIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS 122
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
+HRD+K N+L++ + ++K+ DFG+A + +V T ++ APE++ Y
Sbjct: 123 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS-AY 181
Query: 212 GTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIK 271
+ D+WS+G E+ +P P +E L+ +K++ + +NP
Sbjct: 182 DSKADIWSLGITAIELARGEP--PHSE-LHPMKVLFLIPK----------NNP------- 221
Query: 272 SLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
P G + + PL + ++ L EPS R T E L+H +I
Sbjct: 222 --PTLEGNY-------SKPLK-EFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
++ +G+G +G V C + T E VA+KK+ + E + RE+ +L+ ++HDN
Sbjct: 20 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 77
Query: 91 VIALKDVMMPTHRISFKDV--YLVYELMDTDLHQIIKSSQSLSNDHCKYFVF--QLLRGL 146
++ K V R + K + YL Y + L K + + DH K + Q+ +G+
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERI--DHIKLLQYTSQICKGM 132
Query: 147 KYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTR----WYRAP 202
+YL + +HRDL N+LV +KI DFGL + +++ WY AP
Sbjct: 133 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-AP 191
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEIL 228
E L + + DVWS G + E+
Sbjct: 192 E-SLTESKFSVASDVWSFGVVLYELF 216
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
++ +G+G +G V C + T E VA+KK+ + E + RE+ +L+ ++HDN
Sbjct: 22 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 79
Query: 91 VIALKDVMMPTHRISFKDV--YLVYELMDTDLHQIIKSSQSLSNDHCKYFVF--QLLRGL 146
++ K V R + K + YL Y + L K + + DH K + Q+ +G+
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERI--DHIKLLQYTSQICKGM 134
Query: 147 KYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTR----WYRAP 202
+YL + +HRDL N+LV +KI DFGL + +++ WY AP
Sbjct: 135 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-AP 193
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEIL 228
E L + + DVWS G + E+
Sbjct: 194 E-SLTESKFSVASDVWSFGVVLYELF 218
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q +S Y Q+ ++YL N
Sbjct: 285 C--TREPPF---YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 339
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HR+L N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 396
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLKLI 246
DVW+ G + EI G P +PG + +L+
Sbjct: 397 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 432
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 109/238 (45%), Gaps = 57/238 (23%)
Query: 109 VYLVYELMDTDLHQIIKSSQSLSNDHCK----YFVFQLLR----GLKYLHSANILHRDLK 160
+Y+ EL + +L +++S +++S+++ K Y LLR G+ +LHS I+HRDLK
Sbjct: 102 LYIALELCNLNLQDLVES-KNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLK 160
Query: 161 PGNLLVNA-------------NCDLKICDFGLART-SRGNEQF---MTEYVVTRWYRAPE 203
P N+LV+ N + I DFGL + G F + T +RAPE
Sbjct: 161 PQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPE 220
Query: 204 LL--LCCDNYGTSIDVWSVGCIFAEIL--GRKPIFPGTECLNQLKLIISVFGTQQEADLE 259
LL SID++S+GC+F IL G+ P FG + +
Sbjct: 221 LLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP-----------------FGDKYSRESN 263
Query: 260 FIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHP 317
I R I SL + H SL + A DL+ +M+ +P KR T + L+HP
Sbjct: 264 II------RGIFSLDEMKCLHDRSLIAE----ATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 109/238 (45%), Gaps = 57/238 (23%)
Query: 109 VYLVYELMDTDLHQIIKSSQSLSNDHCK----YFVFQLLR----GLKYLHSANILHRDLK 160
+Y+ EL + +L +++S +++S+++ K Y LLR G+ +LHS I+HRDLK
Sbjct: 102 LYIALELCNLNLQDLVES-KNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLK 160
Query: 161 PGNLLVNA-------------NCDLKICDFGLART-SRGNEQF---MTEYVVTRWYRAPE 203
P N+LV+ N + I DFGL + G F + T +RAPE
Sbjct: 161 PQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSGWRAPE 220
Query: 204 LL--LCCDNYGTSIDVWSVGCIFAEIL--GRKPIFPGTECLNQLKLIISVFGTQQEADLE 259
LL SID++S+GC+F IL G+ P FG + +
Sbjct: 221 LLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP-----------------FGDKYSRESN 263
Query: 260 FIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHP 317
I R I SL + H SL + A DL+ +M+ +P KR T + L+HP
Sbjct: 264 II------RGIFSLDEMKCLHDRSLIAE----ATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 21/206 (10%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
++ +G+G +G V C + T E VA+KK+ + E + RE+ +L+ ++HDN
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE--REIEILKSLQHDN 72
Query: 91 VIALKDVMMPTHRISFKDV--YLVYELMDTDLHQIIKSSQSLSNDHCKYFVF--QLLRGL 146
++ K V R + K + YL Y + L K + + DH K + Q+ +G+
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---KHKERI--DHIKLLQYTSQICKGM 127
Query: 147 KYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTR----WYRAP 202
+YL + +HRDL N+LV +KI DFGL + +++ WY AP
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-AP 186
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEIL 228
E L + + DVWS G + E+
Sbjct: 187 E-SLTESKFSVASDVWSFGVVLYELF 211
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 95/201 (47%), Gaps = 7/201 (3%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNV 91
+ ++ IG+G++G V I+ T + VAIK I+ + E + +E+ +L V
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID-LEEAEDEIEDIQQEITVLSQCDSPYV 87
Query: 92 IALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
+ ++ +++ E + + L + ++L+GL YLHS
Sbjct: 88 TKYYGSYLKDTKL-----WIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHS 142
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
+HRD+K N+L++ + ++K+ DFG+A + +V T ++ APE++ Y
Sbjct: 143 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS-AY 201
Query: 212 GTSIDVWSVGCIFAEILGRKP 232
+ D+WS+G E+ +P
Sbjct: 202 DSKADIWSLGITAIELARGEP 222
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 29 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 85
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 86 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 140
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 141 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 198
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL 228
TR Y PE + +G S VWS+G + +++
Sbjct: 199 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 231
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 38/232 (16%)
Query: 36 KPIGRGAYGVVCSS----INRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD-N 90
KP+GRGA+G V + I++ + K+ + + EL +L HI H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 91 VIAL------------------KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN 132
V+ L K + T+ S ++ ++ Y++ DL++ L+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-----DFLTL 147
Query: 133 DHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE 192
+H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR + ++ +
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 207
Query: 193 ---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
+ +W APE + D Y DVWS G + EI LG P +PG +
Sbjct: 208 GDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 255
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 127/312 (40%), Gaps = 61/312 (19%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 58
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 59 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 113
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 114 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 171
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQ 254
TR Y PE + +G S VWS+G + +++ G P
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--------------------- 210
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E D E I + F + S H L++ L PS R T E
Sbjct: 211 EHDEEII---GGQVFFRQRVSSECQH--------------LIRWCLALRPSDRPTFEEIQ 253
Query: 315 QHPYISGLYDPQ 326
HP++ + PQ
Sbjct: 254 NHPWMQDVLLPQ 265
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 127/312 (40%), Gaps = 61/312 (19%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 91
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 146
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 147 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 204
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQ 254
TR Y PE + +G S VWS+G + +++ G P
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--------------------- 243
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E D E I + F + S H L++ L PS R T E
Sbjct: 244 EHDEEII---GGQVFFRQRVSSECQH--------------LIRWCLALRPSDRPTFEEIQ 286
Query: 315 QHPYISGLYDPQ 326
HP++ + PQ
Sbjct: 287 NHPWMQDVLLPQ 298
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 38/232 (16%)
Query: 36 KPIGRGAYGVVCSS----INRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD-N 90
KP+GRGA+G V + I++ + K+ + + EL +L HI H N
Sbjct: 70 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 129
Query: 91 VIAL------------------KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN 132
V+ L K + T+ S ++ ++ Y++ DL++ L+
Sbjct: 130 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-----DFLTL 184
Query: 133 DHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE 192
+H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR + ++ +
Sbjct: 185 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 244
Query: 193 ---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
+ +W APE + D Y DVWS G + EI LG P +PG +
Sbjct: 245 GDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 292
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 133/291 (45%), Gaps = 57/291 (19%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
+K +G GAYG V ++KI+ ++ A++ L++ +++ K
Sbjct: 59 LKVLGTGAYGKV-----------FLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRT 107
Query: 95 KDVMMPTHRISFKDVYLVYELM-DTDLHQII------------KSSQSLSNDHCKYFVFQ 141
+ ++ R S V L Y +T LH I+ + + + +V +
Sbjct: 108 ERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGE 167
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNE-QFMTEYVVTRWYR 200
++ L++LH I++RD+K N+L+++N + + DFGL++ +E + ++ T Y
Sbjct: 168 IVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYM 227
Query: 201 APELLLCCDN-YGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADL 258
AP+++ D+ + ++D WS+G + E+L G P E +Q ++
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI------------- 274
Query: 259 EFIDNPKARRFIKSLPYSRGTHISSLYPQA-DPLALDLLQKMLVFEPSKRI 308
+RR +KS P YPQ LA DL+Q++L+ +P KR+
Sbjct: 275 -------SRRILKSEPP---------YPQEMSALAKDLIQRLLMKDPKKRL 309
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 79 C--TREPPF---YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV--TRWYRAPELLLCCDNYG 212
+HRDL N LV N +K+ DFGL+R G+ +W APE L + +
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW-TAPE-SLAYNKFS 191
Query: 213 TSIDVWSVGCIFAEI--LGRKPIFPG 236
DVW+ G + EI G P +PG
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSP-YPG 216
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 42/231 (18%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVL 82
EID + I K IG G +G VCS + ++ VAIK + + ++ L E +
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASI 68
Query: 83 LRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ H N+I L+ V+ K V ++ E M+ L + ++ V QL
Sbjct: 69 MGQFDHPNIIHLEGVVTKC-----KPVMIITEYMENGSLDAF-----LRKNDGRFTVIQL 118
Query: 143 L-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------TSRG 185
+ G+KYL + +HRDL N+LVN+N K+ DFG++R T+RG
Sbjct: 119 VGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 178
Query: 186 NEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
+ + RW APE + + ++ DVWS G + E++ G +P +
Sbjct: 179 GK------IPIRW-TAPE-AIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 221
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 9/204 (4%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIK--KINNVFENRIDALRTLRELVLLRHIKHDNVIALK 95
+G+G++G V S + T+E A+K K + V ++ + + VL K + L
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 96 DVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
R+ Y V E ++ DL I+ H ++ ++ GL +L S I
Sbjct: 88 SCFQTMDRL-----YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI 142
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTS 214
++RDLK N+++++ +KI DFG+ + + + + T Y APE ++ YG S
Sbjct: 143 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPE-IIAYQPYGKS 201
Query: 215 IDVWSVGCIFAEILGRKPIFPGTE 238
+D W+ G + E+L + F G +
Sbjct: 202 VDWWAFGVLLYEMLAGQAPFEGED 225
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 127/312 (40%), Gaps = 61/312 (19%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 90
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 145
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 146 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 203
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQ 254
TR Y PE + +G S VWS+G + +++ G P
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--------------------- 242
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E D E I + F + S H L++ L PS R T E
Sbjct: 243 EHDEEII---GGQVFFRQRVSSECQH--------------LIRWCLALRPSDRPTFEEIQ 285
Query: 315 QHPYISGLYDPQ 326
HP++ + PQ
Sbjct: 286 NHPWMQDVLLPQ 297
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 38/232 (16%)
Query: 36 KPIGRGAYGVVCSS----INRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD-N 90
KP+GRGA+G V + I++ + K+ + + EL +L HI H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 91 VIAL------------------KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN 132
V+ L K + T+ S ++ ++ Y++ DL++ L+
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-----LTL 138
Query: 133 DHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE 192
+H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR + ++ +
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 193 ---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
+ +W APE + D Y DVWS G + EI LG P +PG +
Sbjct: 199 GDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 246
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 127/312 (40%), Gaps = 61/312 (19%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 90
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 145
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 146 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 203
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQ 254
TR Y PE + +G S VWS+G + +++ G P
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--------------------- 242
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E D E I + F + S H L++ L PS R T E
Sbjct: 243 EHDEEII---GGQVFFRQRVSSECQH--------------LIRWCLALRPSDRPTFEEIQ 285
Query: 315 QHPYISGLYDPQ 326
HP++ + PQ
Sbjct: 286 NHPWMQDVLLPQ 297
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 78
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 79 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 133
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 134 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 191
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL 228
TR Y PE + +G S VWS+G + +++
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 224
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 127/312 (40%), Gaps = 61/312 (19%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 91
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 146
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 147 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 204
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQ 254
TR Y PE + +G S VWS+G + +++ G P
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--------------------- 243
Query: 255 EADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEAL 314
E D E I + F + S H L++ L PS R T E
Sbjct: 244 EHDEEII---GGQVFFRQRVSSECQH--------------LIRWCLALRPSDRPTFEEIQ 286
Query: 315 QHPYISGLYDPQ 326
HP++ + PQ
Sbjct: 287 NHPWMQDVLLPQ 298
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 109/232 (46%), Gaps = 38/232 (16%)
Query: 36 KPIGRGAYGVVCSS----INRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD-N 90
KP+GRGA+G V + I++ + K+ + + EL +L HI H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 91 VIAL------------------KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN 132
V+ L K + T+ S ++ ++ Y++ DL++ L+
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-----DFLTL 138
Query: 133 DHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE 192
+H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR + ++ +
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 193 ---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
+ +W APE + D Y DVWS G + EI LG P +PG +
Sbjct: 199 GDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 246
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 42/231 (18%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVL 82
EID + I K IG G +G VCS + ++ VAIK + + ++ L E +
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK-QRRDFLSEASI 62
Query: 83 LRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ H N+I L+ V+ K V ++ E M+ L + ++ V QL
Sbjct: 63 MGQFDHPNIIHLEGVVTKC-----KPVMIITEYMENGSLDAF-----LRKNDGRFTVIQL 112
Query: 143 L-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------TSRG 185
+ G+KYL + +HRDL N+LVN+N K+ DFG++R T+RG
Sbjct: 113 VGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRG 172
Query: 186 NEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
+ + RW APE + + ++ DVWS G + E++ G +P +
Sbjct: 173 GK------IPIRW-TAPE-AIAYRKFTSASDVWSYGIVMWEVMSYGERPYW 215
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 78
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 79 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 133
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 134 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 191
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL 228
TR Y PE + +G S VWS+G + +++
Sbjct: 192 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 224
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 49/241 (20%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSSINRETNEK---VAIK--KINNVFENRIDALRTLREL 80
EI+ + I + IG G +G VCS + ++ VAIK K+ + R D L E
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRD---FLGEA 74
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVF 140
++ H N+I L+ V+ + + Y+ +DT L + ND ++ V
Sbjct: 75 SIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKK---------NDG-QFTVI 124
Query: 141 QLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------TS 183
QL+ G+KYL +HRDL N+L+N+N K+ DFGL+R T+
Sbjct: 125 QLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 184
Query: 184 RGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIFPGTECLN 241
RG + + RW APE + + ++ DVWS G + E++ G +P + E N
Sbjct: 185 RGGK------IPIRW-TAPE-AIAFRKFTSASDVWSYGIVMWEVVSYGERPYW---EMTN 233
Query: 242 Q 242
Q
Sbjct: 234 Q 234
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 49 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 105
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 106 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 160
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 161 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 218
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL 228
TR Y PE + +G S VWS+G + +++
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 18/206 (8%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 80 C--TREPPF---YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV--TRWYRAPELLLCCDNYG 212
+HRDL N LV N +K+ DFGL+R G+ +W APE L + +
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW-TAPE-SLAYNKFS 192
Query: 213 TSIDVWSVGCIFAEI--LGRKPIFPG 236
DVW+ G + EI G P +PG
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSP-YPG 217
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 77
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 78 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 132
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 133 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 190
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL 228
TR Y PE + +G S VWS+G + +++
Sbjct: 191 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 223
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 58
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 59 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 113
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 114 SFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 171
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL 228
TR Y PE + +G S VWS+G + +++
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 204
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 91
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 146
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 147 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 204
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL 228
TR Y PE + +G S VWS+G + +++
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 35 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 91
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 92 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 146
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 147 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 204
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL 228
TR Y PE + +G S VWS+G + +++
Sbjct: 205 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 237
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 14/206 (6%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 98 MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHR 157
Y+ Y + L + + + ++ Y Q+ ++YL N +HR
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLREC--NREEVTAVVLLYMATQISSAMEYLEKKNFIHR 154
Query: 158 DLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNYGTS 214
DL N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 155 DLAARNCLVGENHVVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNTFSIK 211
Query: 215 IDVWSVGCIFAEI--LGRKPIFPGTE 238
DVW+ G + EI G P +PG +
Sbjct: 212 SDVWAFGVLLWEIATYGMSP-YPGID 236
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 54 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 110
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 111 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 165
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 166 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 223
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL 228
TR Y PE + +G S VWS+G + +++
Sbjct: 224 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 256
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 37/231 (16%)
Query: 22 WQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLREL 80
W+ +E+ + + ++ +G G G V + KVA+K + + + L E
Sbjct: 4 WEDAWEVPRETLKLVERLGAGQAGEVWMGYYN-GHTKVAVKSLK---QGSMSPDAFLAEA 59
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKY 137
L++ ++H ++ L V ++ + +Y++ E M+ L +K S L+ +
Sbjct: 60 NLMKQLQHQRLVRLYAV------VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSRGNEQFM 190
Q+ G+ ++ N +HRDL+ N+LV+ KI DFGLAR T+R +F
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP 173
Query: 191 TEYVVTRWYRAPELLLCCDNYGT---SIDVWSVGCIFAEIL--GRKPIFPG 236
++ APE + NYGT DVWS G + EI+ GR P +PG
Sbjct: 174 IKWT------APEAI----NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 213
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 22/213 (10%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLREL 80
++++Y +G G +G V S I N VAIK + ++RI + R E+
Sbjct: 34 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE---KDRISDWGELPNGTRVPMEV 90
Query: 81 VLLRHIKH--DNVIALKDVMMPTHRISFKDVYLVYELMD--TDLHQIIKSSQSLSNDHCK 136
VLL+ + VI L D L+ E + DL I +L + +
Sbjct: 91 VLLKKVSSGFSGVIRLLDWFERP-----DSFVLILERPEPVQDLFDFITERGALQEELAR 145
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDFGLARTSRGNEQFMTEYVV 195
F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DFG + + T++
Sbjct: 146 SFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK--DTVYTDFDG 203
Query: 196 TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL 228
TR Y PE + +G S VWS+G + +++
Sbjct: 204 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 236
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
IG G++G V + ++ V I + R++ LRE+ +++ ++H N++
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEF--LREVAIMKRLRHPNIVLFMGA 102
Query: 98 MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSAN--IL 155
+ +S YL + LH+ + + L + + +G+ YLH+ N I+
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 156 HRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSI 215
HR+LK NLLV+ +K+CDFGL+R T + APE+L + S
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKS- 220
Query: 216 DVWSVGCIFAEI 227
DV+S G I E+
Sbjct: 221 DVYSFGVILWEL 232
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNV-FENRIDALRTLRELVLLRHIKHDN---VIA 93
IGRG +G V +T + A+K ++ + + L E ++L + + ++
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
+ ++SF + +LM+ DLH + S +++ +++ GL+++H+
Sbjct: 257 MSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 311
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+++RDLKP N+L++ + ++I D GLA + + V T Y APE+L Y
Sbjct: 312 FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVLQKGVAYD 369
Query: 213 TSIDVWSVGCIFAEIL-GRKPI 233
+S D +S+GC+ ++L G P
Sbjct: 370 SSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNV-FENRIDALRTLRELVLLRHIKHDN---VIA 93
IGRG +G V +T + A+K ++ + + L E ++L + + ++
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
+ ++SF + +LM+ DLH + S +++ +++ GL+++H+
Sbjct: 257 MSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 311
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+++RDLKP N+L++ + ++I D GLA + + V T Y APE+L Y
Sbjct: 312 FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVLQKGVAYD 369
Query: 213 TSIDVWSVGCIFAEIL-GRKPI 233
+S D +S+GC+ ++L G P
Sbjct: 370 SSADWFSLGCMLFKLLRGHSPF 391
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 104/225 (46%), Gaps = 32/225 (14%)
Query: 27 EIDTKYVPIKP-IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVL 82
EID V I+ IG G +G VCS + ++ VAIK + + + + L E +
Sbjct: 29 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEK-QRRDFLSEASI 87
Query: 83 LRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ H NVI L+ V+ + + ++ +D+ L Q ND ++ V QL
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ---------NDG-QFTVIQL 137
Query: 143 L-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGN------EQF 189
+ G+KYL N +HRDL N+LVN+N K+ DFGL+R +
Sbjct: 138 VGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 197
Query: 190 MTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
+ + RW APE + + ++ DVWS G + E++ G +P
Sbjct: 198 LGGKIPIRW-TAPEAIQ-YRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 33/222 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G +G V T +VAIK + + L+E +++ I+H+ ++ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTT-RVAIKTLKP---GTMSPEAFLQEAQVMKKIRHEKLVQLYAV 81
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIKS--SQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+S + +Y+V E M L +K + L Q+ G+ Y+ N
Sbjct: 82 ------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR-------TSRGNEQFMTEYVVTRWYRAPELLLC 207
+HRDL+ N+LV N K+ DFGLAR T+R +F ++ APE L
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT------APEAAL- 188
Query: 208 CDNYGTSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + E+ GR P +PG E L+Q++
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 229
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
+K +G G +G V + KVA+K + + L E L++ ++HD ++ L
Sbjct: 18 VKRLGAGQFGEVWMGYYNNST-KVAVKTLK---PGTMSVQAFLEEANLMKTLQHDKLVRL 73
Query: 95 KDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVF--QLLRGLKYLHS 151
V+ I Y++ E M L +KS + K F Q+ G+ Y+
Sbjct: 74 YAVVTREEPI-----YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 128
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV--TRWYRAPELLLCCD 209
N +HRDL+ N+LV+ + KI DFGLAR NE E +W APE +
Sbjct: 129 KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKW-TAPEAI---- 183
Query: 210 NYG---TSIDVWSVGCIFAEIL--GRKPIFPG 236
N+G DVWS G + EI+ G+ P +PG
Sbjct: 184 NFGCFTIKSDVWSFGILLYEIVTYGKIP-YPG 214
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
+K +G G +G V + KVA+K + + L E L++ ++HD ++ L
Sbjct: 17 VKKLGAGQFGEVWMGYYNNST-KVAVKTLK---PGTMSVQAFLEEANLMKTLQHDKLVRL 72
Query: 95 KDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVF--QLLRGLKYLHS 151
V+ I Y++ E M L +KS + K F Q+ G+ Y+
Sbjct: 73 YAVVTKEEPI-----YIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 127
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV--TRWYRAPELLLCCD 209
N +HRDL+ N+LV+ + KI DFGLAR NE E +W APE +
Sbjct: 128 KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKW-TAPEAI---- 182
Query: 210 NYG---TSIDVWSVGCIFAEIL--GRKPIFPG 236
N+G +VWS G + EI+ G+ P +PG
Sbjct: 183 NFGCFTIKSNVWSFGILLYEIVTYGKIP-YPG 213
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 26/212 (12%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ +G G +G V + KVA+K + + + L E L++ ++H ++ L
Sbjct: 14 VERLGAGQFGEVWMGY-YNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLVRL 69
Query: 95 KDVMMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHS 151
V ++ + +Y++ E M+ L +K S L+ + Q+ G+ ++
Sbjct: 70 YAV------VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 123
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV--TRWYRAPELLLCCD 209
N +HR+L+ N+LV+ KI DFGLAR NE E +W APE +
Sbjct: 124 RNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW-TAPEAI---- 178
Query: 210 NYGT---SIDVWSVGCIFAEIL--GRKPIFPG 236
NYGT DVWS G + EI+ GR P +PG
Sbjct: 179 NYGTFTIKSDVWSFGILLTEIVTHGRIP-YPG 209
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNV-FENRIDALRTLRELVLLRHIKHDN---VIA 93
IGRG +G V +T + A+K ++ + + L E ++L + + ++
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
+ ++SF + +LM+ DLH + S +++ +++ GL+++H+
Sbjct: 257 MSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 311
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+++RDLKP N+L++ + ++I D GLA + + V T Y APE+L Y
Sbjct: 312 FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVLQKGVAYD 369
Query: 213 TSIDVWSVGCIFAEIL-GRKPI 233
+S D +S+GC+ ++L G P
Sbjct: 370 SSADWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNV-FENRIDALRTLRELVLLRHIKHDN---VIA 93
IGRG +G V +T + A+K ++ + + L E ++L + + ++
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 94 LKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
+ ++SF + +LM+ DLH + S +++ +++ GL+++H+
Sbjct: 256 MSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 310
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
+++RDLKP N+L++ + ++I D GLA + + V T Y APE+L Y
Sbjct: 311 FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS--VGTHGYMAPEVLQKGVAYD 368
Query: 213 TSIDVWSVGCIFAEIL-GRKPI 233
+S D +S+GC+ ++L G P
Sbjct: 369 SSADWFSLGCMLFKLLRGHSPF 390
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 324 C--TREPPF---YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 378
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HR+L N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 435
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLKLI 246
DVW+ G + EI G P +PG + +L+
Sbjct: 436 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 471
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 34/218 (15%)
Query: 36 KPIGRGAYGVVCSSINRETNEK----VAIKKINNVF--ENRIDALRTLRELVLLRHIKHD 89
K IG G +G V + + ++ K VAIK + + + R+D L E ++ H
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD---FLGEAGIMGQFSHH 106
Query: 90 NVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLL------ 143
N+I L+ V+ +K + ++ E M+ + L ++ V QL+
Sbjct: 107 NIIRLEGVIS-----KYKPMMIITEYMENGALD-----KFLREKDGEFSVLQLVGMLRGI 156
Query: 144 -RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ--FMTE--YVVTRW 198
G+KYL + N +HRDL N+LVN+N K+ DFGL+R + + + T + RW
Sbjct: 157 AAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW 216
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
APE + + ++ DVWS G + E++ G +P +
Sbjct: 217 -TAPE-AISYRKFTSASDVWSFGIVMWEVMTYGERPYW 252
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 9/204 (4%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIK--KINNVFENRIDALRTLRELVLLRHIKHDNVIALK 95
+G+G++G V S + T+E A+K K + V ++ + + VL K + L
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 96 DVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
R+ Y V E ++ DL I+ H ++ ++ GL +L S I
Sbjct: 409 SCFQTMDRL-----YFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGI 463
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTS 214
++RDLK N+++++ +KI DFG+ + + + + T Y APE ++ YG S
Sbjct: 464 IYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPE-IIAYQPYGKS 522
Query: 215 IDVWSVGCIFAEILGRKPIFPGTE 238
+D W+ G + E+L + F G +
Sbjct: 523 VDWWAFGVLLYEMLAGQAPFEGED 546
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G YG V + ++ + VA+K + E+ ++ L+E +++ IKH N++ L V
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 98 MMPTHRISFKDVYLVYELMD-TDLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
T F Y++ E M +L ++ + Q ++ Y Q+ ++YL N
Sbjct: 282 C--TREPPF---YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 336
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY 211
+HR+L N LV N +K+ DFGL+R G+ T + ++ + APE L + +
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--YTAHAGAKFPIKWTAPE-SLAYNKF 393
Query: 212 GTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLKLI 246
DVW+ G + EI G P +PG + +L+
Sbjct: 394 SIKSDVWAFGVLLWEIATYGMSP-YPGIDLSQVYELL 429
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 38/232 (16%)
Query: 36 KPIGRGAYGVVCSS----INRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD-N 90
KP+GRGA+G V + I++ + K+ + + EL +L HI H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 91 VIAL------------------KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN 132
V+ L K + T+ S ++ ++ Y++ DL++ L+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-----DFLTL 147
Query: 133 DHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE 192
+H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR + + +
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 193 ---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
+ +W APE + D Y DVWS G + EI LG P +PG +
Sbjct: 208 GDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 255
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 109/237 (45%), Gaps = 48/237 (20%)
Query: 36 KPIGRGAYGVVCSS----INRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD-N 90
KP+GRGA+G V + I++ + K+ + + EL +L HI H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 91 VIAL------------------KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN 132
V+ L K + T+ S ++ ++ Y++ DL++ L+
Sbjct: 84 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-----DFLTL 138
Query: 133 DHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR--------TSR 184
+H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR +
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 185 GNEQFMTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
G+ + +++ APE + D Y DVWS G + EI LG P +PG +
Sbjct: 199 GDARLPLKWM------APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 246
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 109/237 (45%), Gaps = 48/237 (20%)
Query: 36 KPIGRGAYGVVCSS----INRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD-N 90
KP+GRGA+G V + I++ + K+ + + EL +L HI H N
Sbjct: 24 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 83
Query: 91 VIAL------------------KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN 132
V+ L K + T+ S ++ ++ Y++ DL++ L+
Sbjct: 84 VVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF-----LTL 138
Query: 133 DHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR--------TSR 184
+H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR +
Sbjct: 139 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 185 GNEQFMTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
G+ + +++ APE + D Y DVWS G + EI LG P +PG +
Sbjct: 199 GDARLPLKWM------APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 246
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 38/232 (16%)
Query: 36 KPIGRGAYGVVCSS----INRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD-N 90
KP+GRGA+G V + I++ + K+ + + EL +L HI H N
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 91 VIAL------------------KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN 132
V+ L K + T+ S ++ ++ Y+ DL++ L+
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDF-----LTL 149
Query: 133 DHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE 192
+H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR + ++ +
Sbjct: 150 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 209
Query: 193 ---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
+ +W APE + D Y DVWS G + EI LG P +PG +
Sbjct: 210 GDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 257
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 33/222 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G +G V T +VAIK + + L+E +++ ++H+ ++ L V
Sbjct: 19 LGQGCFGEVWMGTWNGTT-RVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+S + +Y+V E M L +K + + L Q+ G+ Y+ N
Sbjct: 75 ------VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 128
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR-------TSRGNEQFMTEYVVTRWYRAPELLLC 207
+HRDL+ N+LV N K+ DFGLAR T+R +F ++ APE L
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT------APEAAL- 181
Query: 208 CDNYGTSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + E+ GR P +PG E L+Q++
Sbjct: 182 YGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 222
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 109/237 (45%), Gaps = 48/237 (20%)
Query: 36 KPIGRGAYGVVCSS----INRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD-N 90
KP+GRGA+G V + I++ + K+ + + EL +L HI H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 91 VIAL------------------KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN 132
V+ L K + T+ S ++ ++ Y++ DL++ L+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK-----DFLTL 147
Query: 133 DHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR--------TSR 184
+H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR +
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRK 207
Query: 185 GNEQFMTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
G+ + +++ APE + D Y DVWS G + EI LG P +PG +
Sbjct: 208 GDARLPLKWM------APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 255
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 121/299 (40%), Gaps = 61/299 (20%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVL-LRHI 86
ID V + +G G G V N+ T EK A+K + D + RE+ L R
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ-------DCPKARREVELHWRAS 68
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQII--KSSQSLSNDHCKYFVFQLL 143
+ +++ + DV + K + +V E +D +L I + Q+ + + +
Sbjct: 69 QCPHIVRIVDVYENLY-AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 144 RGLKYLHSANILHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
++YLHS NI HRD+KP NLL + N LK+ DFG A+ + G
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG--------------- 172
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEF 260
+ Y S D+WS+G I +L P F L I T+
Sbjct: 173 --------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL----AISPGMKTRIRMGQYE 220
Query: 261 IDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
NP+ + + L++ +L EP++R+T+TE + HP+I
Sbjct: 221 FPNPE-------------------WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI 260
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G +G V T +VAIK + + L+E +++ ++H+ ++ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTT-RVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIKS--SQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+S + +Y+V E M L +K + L Q+ G+ Y+ N
Sbjct: 82 ------VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV--TRWYRAPELLLCCDNYG 212
+HRDL+ N+LV N K+ DFGLAR NE + +W APE L +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW-TAPEAAL-YGRFT 193
Query: 213 TSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
DVWS G + E+ GR P +PG E L+Q++
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 229
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 33/222 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G +G V T +VAIK + + L+E +++ ++H+ ++ L V
Sbjct: 23 LGQGCFGEVWMGTWNGTT-RVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+S + +Y+V E M+ L +K + + L Q+ G+ Y+ N
Sbjct: 79 ------VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY 132
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR-------TSRGNEQFMTEYVVTRWYRAPELLLC 207
+HRDL+ N+LV N K+ DFGLAR T+R +F ++ APE L
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWT------APEAAL- 185
Query: 208 CDNYGTSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + E+ GR P +PG E L+Q++
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 226
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 33/222 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G +G V T +VAIK + + L+E +++ ++H+ ++ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTT-RVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIKS--SQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+S + +Y+V E M L +K + L Q+ G+ Y+ N
Sbjct: 82 ------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR-------TSRGNEQFMTEYVVTRWYRAPELLLC 207
+HRDL+ N+LV N K+ DFGLAR T+R +F ++ APE L
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT------APEAAL- 188
Query: 208 CDNYGTSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + E+ GR P +PG E L+Q++
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 229
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 33/222 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G +G V T +VAIK + + L+E +++ ++H+ ++ L V
Sbjct: 23 LGQGCFGEVWMGTWNGTT-RVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 78
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+S + +Y+V E M+ L +K + + L Q+ G+ Y+ N
Sbjct: 79 ------VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNY 132
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR-------TSRGNEQFMTEYVVTRWYRAPELLLC 207
+HRDL+ N+LV N K+ DFGLAR T+R +F ++ APE L
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT------APEAAL- 185
Query: 208 CDNYGTSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + E+ GR P +PG E L+Q++
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 226
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 33/222 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G +G V T +VAIK + + L+E +++ ++H+ ++ L V
Sbjct: 17 LGQGCFGEVWMGTWNGTT-RVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIKS--SQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+S + +Y+V E M L +K + L Q+ G+ Y+ N
Sbjct: 73 ------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 126
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR-------TSRGNEQFMTEYVVTRWYRAPELLLC 207
+HRDL+ N+LV N K+ DFGLAR T+R +F ++ APE L
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT------APEAAL- 179
Query: 208 CDNYGTSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + E+ GR P +PG E L+Q++
Sbjct: 180 YGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 220
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 33/222 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G +G V T +VAIK + + L+E +++ ++H+ ++ L V
Sbjct: 15 LGQGCFGEVWMGTWNGTT-RVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIKS--SQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+S + +Y+V E M L +K + L Q+ G+ Y+ N
Sbjct: 71 ------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 124
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR-------TSRGNEQFMTEYVVTRWYRAPELLLC 207
+HRDL+ N+LV N K+ DFGLAR T+R +F ++ APE L
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT------APEAAL- 177
Query: 208 CDNYGTSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + E+ GR P +PG E L+Q++
Sbjct: 178 YGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 218
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G +G V T +VAIK + + L+E +++ ++H+ ++ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTT-RVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIKS--SQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+S + +Y+V E M L +K + L Q+ G+ Y+ N
Sbjct: 82 ------VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV--TRWYRAPELLLCCDNYG 212
+HRDL+ N+LV N K+ DFGLAR NE + +W APE L +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL-YGRFT 193
Query: 213 TSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
DVWS G + E+ GR P +PG E L+Q++
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 229
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 147/353 (41%), Gaps = 75/353 (21%)
Query: 22 WQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLR-EL 80
W+ ++ ++ I+ +G G +G V + + + A+K + N+ + R+ + E
Sbjct: 27 WKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKK----YTRSAKIEA 82
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQ--SLSNDHCKYF 138
+L+ I++D++ V + + + L++E + L++II + + K +
Sbjct: 83 DILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLY 142
Query: 139 VFQLLRGLKYLHSANILHRDLKPGNLLVN-------------------------ANCDLK 173
++L+ L YL ++ H DLKP N+L++ + +K
Sbjct: 143 CIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIK 202
Query: 174 ICDFGLARTSRGNEQFMTEY----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILG 229
+ DFG A F ++Y + TR YRAPE++L + S D+WS GC+ AE+
Sbjct: 203 LIDFGCA-------TFKSDYHGSIINTRQYRAPEVILNL-GWDVSSDMWSFGCVLAELYT 254
Query: 230 RKPIFPGTECLNQLKLIISV-------------------FGTQQEADLEFIDNPKARRFI 270
+F E + L ++ S+ + + E L + +N + I
Sbjct: 255 GSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSI 314
Query: 271 KSLPYSRGTHISSLYPQ----ADPLALDLLQKMLVFEPSKRITVTEALQHPYI 319
K H+ P L D L +L +P+ R + E L+H ++
Sbjct: 315 K--------HVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 104/206 (50%), Gaps = 28/206 (13%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNV-FENRIDALRTLRELVLLRHIKHDNVI---A 93
+G+GA V +++T + AIK NN+ F +D +RE +L+ + H N++ A
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDV--QMREFEVLKKLNHKNIVKLFA 74
Query: 94 LKDVMMPTHRISFKDVYLVYELMD-TDLHQIIKS-SQSLSNDHCKYFVF--QLLRGLKYL 149
+++ H++ L+ E L+ +++ S + ++ + ++ G+ +L
Sbjct: 75 IEEETTTRHKV------LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 150 HSANILHRDLKPGNLL----VNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL- 204
I+HR++KPGN++ + K+ DFG AR +EQF++ Y T Y P++
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLY-GTEEYLHPDMY 187
Query: 205 ---LLCCDN---YGTSIDVWSVGCIF 224
+L D+ YG ++D+WS+G F
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTF 213
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G +G V T +VAIK + + L+E +++ ++H+ ++ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTT-RVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 98 MMPTHRISFKDVYLVYELMDTD-LHQIIKS--SQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+S + +Y+V E M L +K + L Q+ G+ Y+ N
Sbjct: 82 ------VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV--TRWYRAPELLLCCDNYG 212
+HRDL+ N+LV N K+ DFGLAR NE + +W APE L +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL-YGRFT 193
Query: 213 TSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
DVWS G + E+ GR P +PG E L+Q++
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 229
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G +G V T +VAIK + + L+E +++ ++H+ ++ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTT-RVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 98 MMPTHRISFKDVYLVYELMDTD-LHQIIKS--SQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+S + +Y+V E M L +K + L Q+ G+ Y+ N
Sbjct: 82 ------VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV--TRWYRAPELLLCCDNYG 212
+HRDL+ N+LV N K+ DFGLAR NE + +W APE L +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL-YGRFT 193
Query: 213 TSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
DVWS G + E+ GR P +PG E L+Q++
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 229
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G +G V T +VAIK + + L+E +++ ++H+ ++ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTT-RVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIKS--SQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+S + +Y+V E M L +K + L Q+ G+ Y+ N
Sbjct: 82 ------VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV--TRWYRAPELLLCCDNYG 212
+HRDL+ N+LV N K+ DFGLAR NE + +W APE L +
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL-YGRFT 193
Query: 213 TSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
DVWS G + E+ GR P +PG E L+Q++
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 229
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 102/230 (44%), Gaps = 24/230 (10%)
Query: 25 LFEIDTKYVPIKPI-GRGAYGVVCSS--INRETNEKVAIKKINNVFENRIDALRTLRELV 81
L EID + ++ I G G +G V + I E K A + I+ +R +E
Sbjct: 1 LLEIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVR--QEAK 58
Query: 82 LLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQ 141
L +KH N+IAL+ V + ++ LV E + S + + D + Q
Sbjct: 59 LFAMLKHPNIIALRGVCLKE-----PNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ 113
Query: 142 LLRGLKYLHSANI---LHRDLKPGNLLV--------NANCDLKICDFGLARTSRGNEQFM 190
+ RG+ YLH I +HRDLK N+L+ +N LKI DFGLAR + M
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK-M 172
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECL 240
+ W APE++ + DVWS G + E+L + F G + L
Sbjct: 173 SAAGAYAWM-APEVIR-ASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL 220
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 33/222 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G +G V T +VAIK + + L+E +++ ++H+ ++ L V
Sbjct: 192 LGQGCFGEVWMGTWNGTT-RVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+S + +Y+V E M L +K + + L Q+ G+ Y+ N
Sbjct: 248 ------VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 301
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR-------TSRGNEQFMTEYVVTRWYRAPELLLC 207
+HRDL+ N+LV N K+ DFGLAR T+R +F ++ APE L
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT------APEAAL- 354
Query: 208 CDNYGTSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + E+ GR P +PG E L+Q++
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 395
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G +G V T +VAIK + + L+E +++ ++H+ ++ L V
Sbjct: 26 LGQGCFGEVWMGTWNGTT-RVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 81
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIKS--SQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+S + +Y+V E M L +K + L Q+ G+ Y+ N
Sbjct: 82 ------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 135
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV--TRWYRAPELLLCCDNYG 212
+HRDL N+LV N K+ DFGLAR NE + +W APE L +
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW-TAPEAAL-YGRFT 193
Query: 213 TSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
DVWS G + E+ GR P +PG E L+Q++
Sbjct: 194 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 229
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 33/222 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G +G V T +VAIK + + L+E +++ ++H+ ++ L V
Sbjct: 275 LGQGCFGEVWMGTWNGTT-RVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 330
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+S + +Y+V E M L +K + + L Q+ G+ Y+ N
Sbjct: 331 ------VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 384
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR-------TSRGNEQFMTEYVVTRWYRAPELLLC 207
+HRDL+ N+LV N K+ DFGLAR T+R +F ++ APE L
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT------APEAAL- 437
Query: 208 CDNYGTSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + E+ GR P +PG E L+Q++
Sbjct: 438 YGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 478
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 33/222 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G +G V T +VAIK + + L+E +++ ++H+ ++ L V
Sbjct: 192 LGQGCFGEVWMGTWNGTT-RVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+S + +Y+V E M L +K + + L Q+ G+ Y+ N
Sbjct: 248 ------VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 301
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR-------TSRGNEQFMTEYVVTRWYRAPELLLC 207
+HRDL+ N+LV N K+ DFGLAR T+R +F ++ APE L
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT------APEAAL- 354
Query: 208 CDNYGTSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + E+ GR P +PG E L+Q++
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 395
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG+G +G V R KVA+K I +N A L E ++ ++H N++ L
Sbjct: 26 LQTIGKGEFGDVMLGDYR--GNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLVQL 79
Query: 95 KDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSS--QSLSNDHCKYFVFQLLRGLKYLHS 151
V++ +Y+V E M L ++S L D F + ++YL
Sbjct: 80 LGVIVEEK----GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
N +HRDL N+LV+ + K+ DFGL + + + T + +W APE L +
Sbjct: 136 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVKW-TAPEALR-EKKF 191
Query: 212 GTSIDVWSVGCIFAEI--LGRKP 232
T DVWS G + EI GR P
Sbjct: 192 STKSDVWSFGILLWEIYSFGRVP 214
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
IGRG +G V S R N VA+K + A + L+E +L+ H N++ L V
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA-KFLQEARILKQYSHPNIVRLIGV 180
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIKSSQS-LSNDHCKYFVFQLLRGLKYLHSANIL 155
+ +Y+V EL+ D +++ + L V G++YL S +
Sbjct: 181 CTQK-----QPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCI 235
Query: 156 HRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMT---EYVVTRWYRAPELLLCCDNYG 212
HRDL N LV LKI DFG++R + V +W APE L NYG
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKW-TAPEAL----NYG 290
Query: 213 ---TSIDVWSVGCIFAEI--LGRKP 232
+ DVWS G + E LG P
Sbjct: 291 RYSSESDVWSFGILLWETFSLGASP 315
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG+G +G V R KVA+K I +N A L E ++ ++H N++ L
Sbjct: 198 LQTIGKGEFGDVMLGDYR--GNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLVQL 251
Query: 95 KDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSS--QSLSNDHCKYFVFQLLRGLKYLHS 151
V++ +Y+V E M L ++S L D F + ++YL
Sbjct: 252 LGVIVEEK----GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
N +HRDL N+LV+ + K+ DFGL + + + T + +W APE L +
Sbjct: 308 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVKW-TAPEALR-EKKF 363
Query: 212 GTSIDVWSVGCIFAEI--LGRKP 232
T DVWS G + EI GR P
Sbjct: 364 STKSDVWSFGILLWEIYSFGRVP 386
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG+G +G V R KVA+K I +N A L E ++ ++H N++ L
Sbjct: 17 LQTIGKGEFGDVMLGDYR--GNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLVQL 70
Query: 95 KDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSS--QSLSNDHCKYFVFQLLRGLKYLHS 151
V++ +Y+V E M L ++S L D F + ++YL
Sbjct: 71 LGVIVEEK----GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
N +HRDL N+LV+ + K+ DFGL + + + T + +W APE L +
Sbjct: 127 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVKW-TAPEALREA-AF 182
Query: 212 GTSIDVWSVGCIFAEI--LGRKP 232
T DVWS G + EI GR P
Sbjct: 183 STKSDVWSFGILLWEIYSFGRVP 205
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 129/290 (44%), Gaps = 41/290 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G G V +R T +K A+K + + + R + + +++ + DV
Sbjct: 37 LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQA------SGGPHIVCILDV 90
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQII--KSSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
H + + ++ E M+ +L I + Q+ + + + +++LHS NI
Sbjct: 91 YENMHH-GKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI 149
Query: 155 LHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
HRD+KP NLL + + LK+ DFG A+ + N + T +Y APE +L + Y
Sbjct: 150 AHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTPYYVAPE-VLGPEKY 206
Query: 212 GTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
S D+WS+G I +L G P + T IS P +R I
Sbjct: 207 DKSCDMWSLGVIMYILLCGFPPFYSNT------GQAIS---------------PGMKRRI 245
Query: 271 KSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS 320
+ Y + + + A L++ +L +P++R+T+T+ + HP+I+
Sbjct: 246 RLGQYG---FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWIN 292
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDN 90
++ + +GRG +G V + + T + A KK+N + + + E +L +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTD-----LHQIIKSSQSLSNDHCKYFVFQLLRG 145
+++L D+ LV +M+ ++ + + + ++ Q++ G
Sbjct: 247 IVSLAYAFETK-----TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL 205
L++LH NI++RDLKP N+L++ + +++I D GLA + + Y T + APELL
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 206 LCCDNYGTSIDVWSVGCIFAEILGRKPIF 234
L + Y S+D +++G E++ + F
Sbjct: 362 L-GEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDN 90
++ + +GRG +G V + + T + A KK+N + + + E +L +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTD-----LHQIIKSSQSLSNDHCKYFVFQLLRG 145
+++L D+ LV +M+ ++ + + + ++ Q++ G
Sbjct: 247 IVSLAYAFETK-----TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL 205
L++LH NI++RDLKP N+L++ + +++I D GLA + + Y T + APELL
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 206 LCCDNYGTSIDVWSVGCIFAEILGRKPIF 234
L + Y S+D +++G E++ + F
Sbjct: 362 L-GEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKIN-NVFENRIDALRTLRELVLLRHIKHD 89
I+ +G G +G V C T E+VA+K + N I L+ +E+ +LR++ H+
Sbjct: 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLK--KEIEILRNLYHE 83
Query: 90 NVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSN--DHCKYFVFQLLRGL 146
N++ K + K L+ E + + L + + +++ N KY V Q+ +G+
Sbjct: 84 NIVKYKGICTEDGGNGIK---LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAV-QICKGM 139
Query: 147 KYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMT----EYVVTRWYRAP 202
YL S +HRDL N+LV + +KI DFGL + +++ T WY AP
Sbjct: 140 DYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-AP 198
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEIL 228
E L+ Y S DVWS G E+L
Sbjct: 199 ECLMQSKFYIAS-DVWSFGVTLHELL 223
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 129/290 (44%), Gaps = 41/290 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G G V +R T +K A+K + + + R + + +++ + DV
Sbjct: 18 LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQA------SGGPHIVCILDV 71
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQII--KSSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
H + + ++ E M+ +L I + Q+ + + + +++LHS NI
Sbjct: 72 YENMHH-GKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNI 130
Query: 155 LHRDLKPGNLLVNA---NCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
HRD+KP NLL + + LK+ DFG A+ + N + T +Y APE +L + Y
Sbjct: 131 AHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA--LQTPCYTPYYVAPE-VLGPEKY 187
Query: 212 GTSIDVWSVGCIFAEIL-GRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
S D+WS+G I +L G P + T IS P +R I
Sbjct: 188 DKSCDMWSLGVIMYILLCGFPPFYSNT------GQAIS---------------PGMKRRI 226
Query: 271 KSLPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRITVTEALQHPYIS 320
+ Y + + + A L++ +L +P++R+T+T+ + HP+I+
Sbjct: 227 RLGQYG---FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWIN 273
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 33/222 (14%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G +G V T +VAIK + + L+E +++ ++H+ ++ L V
Sbjct: 192 LGQGCFGEVWMGTWNGTT-RVAIKTLK---PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 247
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+S + +Y+V E M L +K + + L Q+ G+ Y+ N
Sbjct: 248 ------VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 301
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLAR-------TSRGNEQFMTEYVVTRWYRAPELLLC 207
+HRDL+ N+LV N K+ DFGLAR T+R +F ++ APE L
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT------APEAAL- 354
Query: 208 CDNYGTSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
+ DVWS G + E+ GR P +PG E L+Q++
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 395
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDN 90
++ + +GRG +G V + + T + A KK+N + + + E +L +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTD-----LHQIIKSSQSLSNDHCKYFVFQLLRG 145
+++L D+ LV +M+ ++ + + + ++ Q++ G
Sbjct: 247 IVSLAYAFETK-----TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL 205
L++LH NI++RDLKP N+L++ + +++I D GLA + + Y T + APELL
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 206 LCCDNYGTSIDVWSVGCIFAEILGRKPIF 234
L + Y S+D +++G E++ + F
Sbjct: 362 L-GEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 101/209 (48%), Gaps = 12/209 (5%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALR-TLRELVLLRHIKHDN 90
++ + +GRG +G V + + T + A KK+N + + + E +L +
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTD-----LHQIIKSSQSLSNDHCKYFVFQLLRG 145
+++L D+ LV +M+ ++ + + + ++ Q++ G
Sbjct: 247 IVSLAYAFETK-----TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELL 205
L++LH NI++RDLKP N+L++ + +++I D GLA + + Y T + APELL
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELL 361
Query: 206 LCCDNYGTSIDVWSVGCIFAEILGRKPIF 234
L + Y S+D +++G E++ + F
Sbjct: 362 L-GEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 42/232 (18%)
Query: 36 KPIGRGAYGVVCSS----INRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD-N 90
KP+GRGA+G V + I++ + K+ + + EL +L HI H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 91 VIAL------------------KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN 132
V+ L K + T+ S ++ ++ Y+ + D L+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF---------LTL 143
Query: 133 DHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE 192
+H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR + ++ +
Sbjct: 144 EHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 203
Query: 193 ---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
+ +W APE + D Y DVWS G + EI LG P +PG +
Sbjct: 204 GDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 251
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 103/206 (50%), Gaps = 28/206 (13%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNV-FENRIDALRTLRELVLLRHIKHDNVI---A 93
+G+GA V +++T + AIK NN+ F +D +RE +L+ + H N++ A
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDV--QMREFEVLKKLNHKNIVKLFA 74
Query: 94 LKDVMMPTHRISFKDVYLVYELMD-TDLHQIIKS-SQSLSNDHCKYFVF--QLLRGLKYL 149
+++ H++ L+ E L+ +++ S + ++ + ++ G+ +L
Sbjct: 75 IEEETTTRHKV------LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL 128
Query: 150 HSANILHRDLKPGNLL----VNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL- 204
I+HR++KPGN++ + K+ DFG AR +EQF+ Y T Y P++
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLY-GTEEYLHPDMY 187
Query: 205 ---LLCCDN---YGTSIDVWSVGCIF 224
+L D+ YG ++D+WS+G F
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTF 213
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
++ IG+G +G V R KVA+K I +N A L E ++ ++H N++ L
Sbjct: 11 LQTIGKGEFGDVMLGDYR--GNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLVQL 64
Query: 95 KDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSS--QSLSNDHCKYFVFQLLRGLKYLHS 151
V++ +Y+V E M L ++S L D F + ++YL
Sbjct: 65 LGVIVEEK----GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
N +HRDL N+LV+ + K+ DFGL + + + T + +W APE L +
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD--TGKLPVKW-TAPEALR-EKKF 176
Query: 212 GTSIDVWSVGCIFAEI--LGRKP 232
T DVWS G + EI GR P
Sbjct: 177 STKSDVWSFGILLWEIYSFGRVP 199
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
IGRG +G V S R N VA+K + A + L+E +L+ H N++ L V
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA-KFLQEARILKQYSHPNIVRLIGV 180
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIKSSQS-LSNDHCKYFVFQLLRGLKYLHSANIL 155
+ +Y+V EL+ D +++ + L V G++YL S +
Sbjct: 181 CTQK-----QPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCI 235
Query: 156 HRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMT---EYVVTRWYRAPELLLCCDNYG 212
HRDL N LV LKI DFG++R + V +W APE L NYG
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKW-TAPEAL----NYG 290
Query: 213 ---TSIDVWSVGCIFAEI--LGRKP 232
+ DVWS G + E LG P
Sbjct: 291 RYSSESDVWSFGILLWETFSLGASP 315
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 105/230 (45%), Gaps = 32/230 (13%)
Query: 27 EIDTKYVPIKP-IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVL 82
EID V I+ IG G +G VCS + ++ VAIK + + + + L E +
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEK-QRRDFLSEASI 61
Query: 83 LRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ H NVI L+ V+ + + ++ +D+ L Q ND ++ V QL
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ---------NDG-QFTVIQL 111
Query: 143 L-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGN------EQF 189
+ G+KYL N +HR L N+LVN+N K+ DFGL+R +
Sbjct: 112 VGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSA 171
Query: 190 MTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIFPGT 237
+ + RW APE + + ++ DVWS G + E++ G +P + T
Sbjct: 172 LGGKIPIRW-TAPEAIQ-YRKFTSASDVWSYGIVMWEVMSYGERPYWDMT 219
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKIN-NVFENRIDALRTLRELVLLRHIKHD 89
I+ +G G +G V C T E+VA+K + N I L+ +E+ +LR++ H+
Sbjct: 14 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLK--KEIEILRNLYHE 71
Query: 90 NVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSN--DHCKYFVFQLLRGL 146
N++ K + K L+ E + + L + + +++ N KY V Q+ +G+
Sbjct: 72 NIVKYKGICTEDGGNGIK---LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAV-QICKGM 127
Query: 147 KYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMT----EYVVTRWYRAP 202
YL S +HRDL N+LV + +KI DFGL + +++ T WY AP
Sbjct: 128 DYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-AP 186
Query: 203 ELLLCCDNYGTSIDVWSVGCIFAEIL 228
E L+ Y S DVWS G E+L
Sbjct: 187 ECLMQSKFYIAS-DVWSFGVTLHELL 211
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYR 200
Q+ +G+ Y+HS ++HRDLKP N+ + +KI DFGL TS N+ T T Y
Sbjct: 144 QITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLV-TSLKNDGKRTRSKGTLRYM 202
Query: 201 APELLLCCDNYGTSIDVWSVGCIFAEIL 228
+PE + D YG +D++++G I AE+L
Sbjct: 203 SPEQISSQD-YGKEVDLYALGLILAELL 229
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 10/107 (9%)
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE---YV 194
+ FQ+ RG+++L S +HRDL N+L++ N +KICDFGLAR N ++ + +
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 195 VTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
+W APE + D Y T DVWS G + EI LG P +PG +
Sbjct: 264 PLKWM-APESIF--DKIYSTKSDVWSYGVLLWEIFSLGGSP-YPGVQ 306
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 34/219 (15%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
+K IGRGA+G +VA+ K+ N +++ A++ L + +L+ +
Sbjct: 79 LKVIGRGAFG------------EVAVVKLKNA--DKVFAMKILNKWEMLKRAETACFREE 124
Query: 95 KDVM-------MPTHRISFKDVYLVYELMD----TDLHQII-KSSQSLSNDHCKYFVFQL 142
+DV+ + T +F+D +Y +MD DL ++ K L + ++++ ++
Sbjct: 125 RDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEM 184
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFG--LARTSRGNEQFMTEYVVTRWYR 200
+ + +H + +HRD+KP N+L++ N +++ DFG L G Q + V T Y
Sbjct: 185 VIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQ-SSVAVGTPDYI 243
Query: 201 APELLLCCDN----YGTSIDVWSVG-CIFAEILGRKPIF 234
+PE+L + YG D WS+G C++ + G P +
Sbjct: 244 SPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY 282
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 99/217 (45%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G +G V T +VAIK + + L+E +++ ++H+ ++ L V
Sbjct: 16 LGQGCFGEVWMGTWNGTT-RVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIK--SSQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+S + + +V E M L +K + + L Q+ G+ Y+ N
Sbjct: 72 ------VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 125
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV--TRWYRAPELLLCCDNYG 212
+HRDL+ N+LV N K+ DFGLAR NE + +W APE L +
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW-TAPEAAL-YGRFT 183
Query: 213 TSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
DVWS G + E+ GR P +PG E L+Q++
Sbjct: 184 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 219
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 38/229 (16%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSS---INRETNEKVAIK--KINNVFENRIDALRTLREL 80
E+D + I + IG G +G VCS + + + VAIK K+ + R D L E
Sbjct: 39 ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRD---FLCEA 95
Query: 81 VLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVF 140
++ H NV+ L+ V+ K V +V E M+ L ++ V
Sbjct: 96 SIMGQFDHPNVVHLEGVV-----TRGKPVMIVIEFMENGALDAF-----LRKHDGQFTVI 145
Query: 141 QLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY 193
QL+ G++YL +HRDL N+LVN+N K+ DFGL+R + + + Y
Sbjct: 146 QLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAV--Y 203
Query: 194 VVT------RWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
T RW APE + + ++ DVWS G + E++ G +P +
Sbjct: 204 TTTGGKIPVRW-TAPEAIQ-YRKFTSASDVWSYGIVMWEVMSYGERPYW 250
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 97/203 (47%), Gaps = 10/203 (4%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKIN-NVFENRIDALRTLRELVLLRHIK-HDNVI 92
I+ +G+G++G V + +ET + A+K + +V D T+ E +L + H +
Sbjct: 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLT 87
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
L R+ + V E ++ DL I+ S+ +++ +++ L +LH
Sbjct: 88 QLFCCFQTPDRL-----FFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD 142
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNY 211
I++RDLK N+L++ K+ DFG+ + N + T Y APE+L Y
Sbjct: 143 KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEM-LY 201
Query: 212 GTSIDVWSVGCIFAEIL-GRKPI 233
G ++D W++G + E+L G P
Sbjct: 202 GPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 98/217 (45%), Gaps = 23/217 (10%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G+G +G V T +VAIK + + L+E +++ ++H+ ++ L V
Sbjct: 193 LGQGCFGEVWMGTWNGTT-RVAIKTLK---PGNMSPEAFLQEAQVMKKLRHEKLVQLYAV 248
Query: 98 MMPTHRISFKDVYLVYELMDT-DLHQIIKS--SQSLSNDHCKYFVFQLLRGLKYLHSANI 154
+S + +Y+V E M L +K + L Q+ G+ Y+ N
Sbjct: 249 ------VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 302
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV--TRWYRAPELLLCCDNYG 212
+HRDL+ N+LV N K+ DFGL R NE + +W APE L +
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKW-TAPEAAL-YGRFT 360
Query: 213 TSIDVWSVGCIFAEIL--GRKPIFPGT---ECLNQLK 244
DVWS G + E+ GR P +PG E L+Q++
Sbjct: 361 IKSDVWSFGILLTELTTKGRVP-YPGMVNREVLDQVE 396
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFE--NRIDALRTLRELVLLRHIKHD 89
Y +K IGRGA+G V + + ++KV K+ + FE R D+ E ++
Sbjct: 77 YDVVKVIGRGAFGEV-QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 135
Query: 90 NVIALKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
V+ L +F+D +Y+V E M DL ++ S+ + K++ +++
Sbjct: 136 WVVQL--------FCAFQDDKYLYMVMEYMPGGDLVNLM-SNYDVPEKWAKFYTAEVVLA 186
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE---YVVTRWYRAP 202
L +HS ++HRD+KP N+L++ + LK+ DFG + +E M V T Y +P
Sbjct: 187 LDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCM--KMDETGMVHCDTAVGTPDYISP 244
Query: 203 ELLLCCDN---YGTSIDVWSVGCIFAEIL-GRKPIFPGT 237
E+L YG D WSVG E+L G P + +
Sbjct: 245 EVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS 283
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 36 KPIGRGAYGVVCSSI-----NRETNEKVAIKKI-NNVFENRIDALRTLRELVLLRHI-KH 88
K +G GA+G V + + KVA+K + + + +AL + EL ++ H+ +H
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL--MSELKIMSHLGQH 109
Query: 89 DNVIAL-------KDVMMPTHRISFKDVYLVYE----LMDTDLHQIIKSSQSLSNDHCKY 137
+N++ L V++ T + D+ +++TD I +S +LS +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANS-TLSTRDLLH 168
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE---YV 194
F Q+ +G+ +L S N +HRD+ N+L+ KI DFGLAR + ++ + +
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKPIFPG 236
+W APE + C Y DVWS G + EI LG P +PG
Sbjct: 229 PVKW-MAPESIFDC-VYTVQSDVWSYGILLWEIFSLGLNP-YPG 269
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 40/232 (17%)
Query: 36 KPIGRGAYGVVCSS----INRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD-N 90
KP+GRGA+G V + I++ + K+ + + EL +L HI H N
Sbjct: 35 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 94
Query: 91 VIAL------------------KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN 132
V+ L K + T+ S ++ ++ Y+ DL++ L+
Sbjct: 95 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK--PEDLYKDF-----LTL 147
Query: 133 DHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE 192
+H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR + + +
Sbjct: 148 EHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 193 ---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
+ +W APE + D Y DVWS G + EI LG P +PG +
Sbjct: 208 GDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 255
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 128/292 (43%), Gaps = 49/292 (16%)
Query: 36 KPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDAL----RTLRELVLLRHIKHDNV 91
+P+G+G +G V + ++++ VA+K + F+++I+ + RE+ + H+ H N+
Sbjct: 29 RPLGKGKFGNVYLAREKKSHFIVALKVL---FKSQIEKEGVEHQLRREIEIQAHLHHPNI 85
Query: 92 IALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH 150
+ L + RI YL+ E +L++ ++ S + + +L L Y H
Sbjct: 86 LRLYNYFYDRRRI-----YLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCH 140
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
++HRD+KP NLL+ +LKI DFG + + + T Y PE++
Sbjct: 141 GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR--KTMCGTLDYLPPEMIE-GRM 197
Query: 211 YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFI 270
+ +D+W +G + E+L P F + I+ V DL+F
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV-------DLKF---------- 240
Query: 271 KSLPYSRGTHISSLYPQADPL-ALDLLQKMLVFEPSKRITVTEALQHPYISG 321
P + P A DL+ K+L PS+R+ + + HP++
Sbjct: 241 ---------------PASVPTGAQDLISKLLRHNPSERLPLAQVSAHPWVRA 277
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 36 KPIGRGAYGVVCSSI-----NRETNEKVAIKKI-NNVFENRIDALRTLRELVLLRHI-KH 88
K +G GA+G V + + KVA+K + + + +AL + EL ++ H+ +H
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL--MSELKIMSHLGQH 109
Query: 89 DNVIAL-------KDVMMPTHRISFKDVYLVYE----LMDTDLHQIIKSSQSLSNDHCKY 137
+N++ L V++ T + D+ +++TD I +S + + D +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD-LLH 168
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE---YV 194
F Q+ +G+ +L S N +HRD+ N+L+ KI DFGLAR + ++ + +
Sbjct: 169 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 228
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKPIFPG 236
+W APE + C Y DVWS G + EI LG P +PG
Sbjct: 229 PVKW-MAPESIFDC-VYTVQSDVWSYGILLWEIFSLGLNP-YPG 269
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKI---NNVFENRIDALRTLRELVLLRH--- 85
+ I+ IG G +G V + +R + IK++ N E + AL L + ++ +
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGC 72
Query: 86 ---IKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD-LHQIIKSSQSLSNDHCKYFVF- 140
+D + K+ + R K +++ E D L Q I+ + D
Sbjct: 73 WDGFDYDPETSSKN----SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 141 -QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWY 199
Q+ +G+ Y+HS +++RDLKP N+ + +KI DFGL TS N+ T Y
Sbjct: 129 EQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLV-TSLKNDGKRXRSKGTLRY 187
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEIL 228
+PE + D YG +D++++G I AE+L
Sbjct: 188 MSPEQISSQD-YGKEVDLYALGLILAELL 215
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFE--NRIDALRTLRELVLLRHIKHD 89
Y +K IGRGA+G V + ++ KV K+ + FE R D+ E ++
Sbjct: 76 YEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 90 NVIALKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
V+ L +F+D +Y+V E M DL ++ S+ + +++ +++
Sbjct: 135 WVVQL--------FYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFYTAEVVLA 185
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE---YVVTRWYRAP 202
L +HS +HRD+KP N+L++ + LK+ DFG + N++ M V T Y +P
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM--KMNKEGMVRCDTAVGTPDYISP 243
Query: 203 ELLLCCDN---YGTSIDVWSVGCIFAEIL-GRKPIFPGT 237
E+L YG D WSVG E+L G P + +
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 282
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFE--NRIDALRTLRELVLLRHIKHD 89
Y +K IGRGA+G V + ++ KV K+ + FE R D+ E ++
Sbjct: 76 YEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 90 NVIALKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
V+ L +F+D +Y+V E M DL ++ S+ + +++ +++
Sbjct: 135 WVVQL--------FYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFYTAEVVLA 185
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE---YVVTRWYRAP 202
L +HS +HRD+KP N+L++ + LK+ DFG + N++ M V T Y +P
Sbjct: 186 LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM--KMNKEGMVRCDTAVGTPDYISP 243
Query: 203 ELLLCCDN---YGTSIDVWSVGCIFAEIL-GRKPIFPGT 237
E+L YG D WSVG E+L G P + +
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 282
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 32 YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFE--NRIDALRTLRELVLLRHIKHD 89
Y +K IGRGA+G V + ++ KV K+ + FE R D+ E ++
Sbjct: 71 YEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 129
Query: 90 NVIALKDVMMPTHRISFKD---VYLVYELM-DTDLHQIIKSSQSLSNDHCKYFVFQLLRG 145
V+ L +F+D +Y+V E M DL ++ S+ + +++ +++
Sbjct: 130 WVVQL--------FYAFQDDRYLYMVMEYMPGGDLVNLM-SNYDVPEKWARFYTAEVVLA 180
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE---YVVTRWYRAP 202
L +HS +HRD+KP N+L++ + LK+ DFG + N++ M V T Y +P
Sbjct: 181 LDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM--KMNKEGMVRCDTAVGTPDYISP 238
Query: 203 ELLLCCDN---YGTSIDVWSVGCIFAEIL-GRKPIFPGT 237
E+L YG D WSVG E+L G P + +
Sbjct: 239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 277
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 142/311 (45%), Gaps = 36/311 (11%)
Query: 5 VEPPNGMKSRGKHYYTMWQTLFEIDTKYVPIKP-IGRGAYGVVCSSINRETNEKVAIKKI 63
+ N ++ RG+ + + +EI+ V + IG G++G V + V I K+
Sbjct: 13 TQEKNKIRPRGQRDSSYY---WEIEASEVMLSTRIGSGSFGTVYKG-KWHGDVAVKILKV 68
Query: 64 NNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMD-TDLHQ 122
+ + A R E+ +LR +H N++ M ++ +V + + + L++
Sbjct: 69 VDPTPEQFQAFRN--EVAVLRKTRHVNILLFMGYMTK------DNLAIVTQWCEGSSLYK 120
Query: 123 IIKSSQSLSNDHCKYFVFQLL-------RGLKYLHSANILHRDLKPGNLLVNANCDLKIC 175
L K+ +FQL+ +G+ YLH+ NI+HRD+K N+ ++ +KI
Sbjct: 121 ------HLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIG 174
Query: 176 DFGLA--RTSRGNEQFMTEYVVTRWYRAPELLLCCDN--YGTSIDVWSVGCIFAEILGRK 231
DFGLA ++ Q + + + + APE++ DN + DV+S G + E++ +
Sbjct: 175 DFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234
Query: 232 PIFPGTECLNQLKLIISVFGTQQEADLE--FIDNPKARRFIKSLPYSRGTHISSLYPQAD 289
P + N+ ++I V DL + + PKA + + + + L+PQ
Sbjct: 235 --LPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQIL 292
Query: 290 PLALDLLQKML 300
+++LLQ L
Sbjct: 293 S-SIELLQHSL 302
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 127/321 (39%), Gaps = 54/321 (16%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA-LRTLRELVLLRHIKHDNVIALKD 96
+G+G +G VC+ R T + A KK+ + L E +L + V++L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL-- 249
Query: 97 VMMPTHRISFKDVY-LVYELM---DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
+ KD LV LM D H ++ ++ GL+ LH
Sbjct: 250 ----AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
I++RDLKP N+L++ + ++I D GLA Q + V T Y APE++ + Y
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTIKGRVGTVGYMAPEVVK-NERYT 363
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
S D W++GC+ E++ + F QQ + I + R +K
Sbjct: 364 FSPDWWALGCLLYEMIAGQSPF------------------QQRK--KKIKREEVERLVKE 403
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRI-----TVTEALQHPYI-------- 319
+P S P A L ++L +P++R+ + E +HP
Sbjct: 404 VPEEYSERFS-------PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRL 456
Query: 320 -SGLYDPQCNPPAQVPLSLDI 339
+G+ +P P Q D+
Sbjct: 457 GAGMLEPPFKPDPQAIYCKDV 477
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 108/232 (46%), Gaps = 39/232 (16%)
Query: 36 KPIGRGAYGVVCSS----INRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD-N 90
KP+GRGA+G V + I++ + K+ + + EL +L HI H N
Sbjct: 34 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 93
Query: 91 VIAL------------------KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN 132
V+ L K + T+ S ++ ++ Y+ + DL++ L+
Sbjct: 94 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPE-DLYK-----DFLTL 147
Query: 133 DHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE 192
+H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR + + +
Sbjct: 148 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 193 ---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
+ +W APE + D Y DVWS G + EI LG P +PG +
Sbjct: 208 GDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 255
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 127/321 (39%), Gaps = 54/321 (16%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDA-LRTLRELVLLRHIKHDNVIALKD 96
+G+G +G VC+ R T + A KK+ + L E +L + V++L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL-- 249
Query: 97 VMMPTHRISFKDVY-LVYELM---DTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSA 152
+ KD LV LM D H ++ ++ GL+ LH
Sbjct: 250 ----AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 153 NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYG 212
I++RDLKP N+L++ + ++I D GLA Q + V T Y APE++ + Y
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQTIKGRVGTVGYMAPEVVK-NERYT 363
Query: 213 TSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKS 272
S D W++GC+ E++ + F QQ + I + R +K
Sbjct: 364 FSPDWWALGCLLYEMIAGQSPF------------------QQRK--KKIKREEVERLVKE 403
Query: 273 LPYSRGTHISSLYPQADPLALDLLQKMLVFEPSKRI-----TVTEALQHPYI-------- 319
+P S P A L ++L +P++R+ + E +HP
Sbjct: 404 VPEEYSERFS-------PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRL 456
Query: 320 -SGLYDPQCNPPAQVPLSLDI 339
+G+ +P P Q D+
Sbjct: 457 GAGMLEPPFKPDPQAIYCKDV 477
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 91/218 (41%), Gaps = 28/218 (12%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHI-KHDNVIALKD 96
+G G+YG V ++E A+K+ + F D R L E+ + +H + L+
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 97 VMMPTHRISFKDVYLVYELMDTDLHQIIKS-SQSLSNDHCKYFVFQLLRGLKYLHSANIL 155
+YL EL L Q ++ SL ++ L L +LHS ++
Sbjct: 125 AWE-----EGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLV 179
Query: 156 HRDLKPGNLLVNANCDLKICDFGL---------ARTSRGNEQFMTEYVVTRWYRAPELLL 206
H D+KP N+ + K+ DFGL G+ ++M APELL
Sbjct: 180 HLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYM----------APELLQ 229
Query: 207 CCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLK 244
+YGT+ DV+S+G E+ + G E QL+
Sbjct: 230 --GSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLR 265
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 38 IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IGRG +G V + + K A+K +N + + + + L E ++++ H NV++L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLSL 114
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKS-SQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ + R + ++ + DL I++ + + + F Q+ +G+KYL S
Sbjct: 115 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 171
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR E + + +W L
Sbjct: 172 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ--T 229
Query: 209 DNYGTSIDVWSVGCIFAEILGR-KPIFP 235
+ T DVWS G + E++ R P +P
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAPPYP 257
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 38 IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IGRG +G V + + K A+K +N + + + + L E ++++ H NV++L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKS-SQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ + R + ++ + DL I++ + + + F Q+ +G+KYL S
Sbjct: 89 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 145
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR E + + +W L
Sbjct: 146 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ--T 203
Query: 209 DNYGTSIDVWSVGCIFAEILGR-KPIFP 235
+ T DVWS G + E++ R P +P
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAPPYP 231
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 132/294 (44%), Gaps = 47/294 (15%)
Query: 36 KPIGRGAYGVV----CSSINRETNE-KVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
+ +G GA+G V C ++ E ++ VA+K + + +N RE LL +++H++
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFH--REAELLTNLQHEH 76
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMD-TDLHQIIKSS-------------QSLSNDHCK 136
++ V + + +V+E M DL++ +++ L+
Sbjct: 77 IVKFYGVC-----VEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMT---EY 193
+ Q+ G+ YL S + +HRDL N LV N +KI DFG++R + +
Sbjct: 132 HIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTM 191
Query: 194 VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIFPGT-----ECLNQLKLI 246
+ RW PE ++ + T DVWS+G + EI G++P + + EC+ Q +++
Sbjct: 192 LPIRWM-PPESIM-YRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVL 249
Query: 247 ISVFGTQQEADLEFID----NPKARRFIKSLPYSRGTHISSLYPQADPLALDLL 296
QE + P R+ IK + T + +L +A P+ LD+L
Sbjct: 250 QRPRTCPQEVYELMLGCWQREPHMRKNIKGIH----TLLQNL-AKASPVYLDIL 298
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 38 IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IGRG +G V + + K A+K +N + + + + L E ++++ H NV++L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLSL 115
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKS-SQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ + R + ++ + DL I++ + + + F Q+ +G+KYL S
Sbjct: 116 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 172
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR E + + +W L
Sbjct: 173 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ--T 230
Query: 209 DNYGTSIDVWSVGCIFAEILGR-KPIFP 235
+ T DVWS G + E++ R P +P
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAPPYP 258
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 38 IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IGRG +G V + + K A+K +N + + + + L E ++++ H NV++L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKS-SQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ + R + ++ + DL I++ + + + F Q+ +G+KYL S
Sbjct: 95 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 151
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR E + + +W L
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ--T 209
Query: 209 DNYGTSIDVWSVGCIFAEILGR-KPIFP 235
+ T DVWS G + E++ R P +P
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 104/231 (45%), Gaps = 40/231 (17%)
Query: 36 KPIGRGAYGVVCSS----INRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHD-N 90
KP+GRGA+G V + I++ + K+ + + EL +L HI H N
Sbjct: 33 KPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 92
Query: 91 VIAL------------------KDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSN 132
V+ L K + T+ S ++ ++ Y+ + D L+
Sbjct: 93 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDF---------LTL 143
Query: 133 DHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE 192
+H + FQ+ +G+++L S +HRDL N+L++ +KI DFGLAR + ++ +
Sbjct: 144 EHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 193 ---YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
+ +W APE + Y DVWS G + EI LG P +PG +
Sbjct: 204 GDARLPLKWM-APETIF-DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 251
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 38 IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IGRG +G V + + K A+K +N + + + + L E ++++ H NV++L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLSL 96
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKS-SQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ + R + ++ + DL I++ + + + F Q+ +G+KYL S
Sbjct: 97 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR E + + +W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ--T 211
Query: 209 DNYGTSIDVWSVGCIFAEILGR-KPIFP 235
+ T DVWS G + E++ R P +P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 38 IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IGRG +G V + + K A+K +N + + + + L E ++++ H NV++L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLSL 95
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKS-SQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ + R + ++ + DL I++ + + + F Q+ +G+KYL S
Sbjct: 96 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR E + + +W L
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ--T 210
Query: 209 DNYGTSIDVWSVGCIFAEILGR-KPIFP 235
+ T DVWS G + E++ R P +P
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 38 IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IGRG +G V + + K A+K +N + + + + L E ++++ H NV++L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLSL 91
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKS-SQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ + R + ++ + DL I++ + + + F Q+ +G+KYL S
Sbjct: 92 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 148
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR E + + +W L
Sbjct: 149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ--T 206
Query: 209 DNYGTSIDVWSVGCIFAEILGR-KPIFP 235
+ T DVWS G + E++ R P +P
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAPPYP 234
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 38 IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IGRG +G V + + K A+K +N + + + + L E ++++ H NV++L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLSL 93
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKS-SQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ + R + ++ + DL I++ + + + F Q+ +G+KYL S
Sbjct: 94 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 150
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR E + + +W L
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ--T 208
Query: 209 DNYGTSIDVWSVGCIFAEILGR-KPIFP 235
+ T DVWS G + E++ R P +P
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAPPYP 236
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 38 IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IGRG +G V + + K A+K +N + + + + L E ++++ H NV++L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLSL 96
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKS-SQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ + R + ++ + DL I++ + + + F Q+ +G+KYL S
Sbjct: 97 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR E + + +W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ--T 211
Query: 209 DNYGTSIDVWSVGCIFAEILGR-KPIFP 235
+ T DVWS G + E++ R P +P
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 41/242 (16%)
Query: 36 KPIGRGAYG--VVCSSINRETNE-----KVAIKKINNVFENRIDALRTLRELVLLRHI-K 87
KP+G GA+G V+ +I + ++ KVA+K + + + D + E+ +++ I K
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGK 92
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKS----------------SQSL 130
H N+I L + Y++ E +L + +++ + L
Sbjct: 93 HKNIINLLGACTQDGPL-----YVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSR---GNE 187
S+ +Q+ RG++YL S +HRDL N+LV + +KI DFGLAR +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXK 207
Query: 188 QFMTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLK 244
+ + +W APE L D Y DVWS G + EI LG P +PG K
Sbjct: 208 KTTNGRLPVKWM-APEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPGVPVEELFK 263
Query: 245 LI 246
L+
Sbjct: 264 LL 265
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 18/204 (8%)
Query: 35 IKPIGRGAYGVVC----SSINRETNEKVAIKKINNVFENRIDALRT--LRELVLLRHIKH 88
I+ +G G +G V N T E VA+K + E LR+ RE+ +LR + H
Sbjct: 14 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK---EGCGPQLRSGWQREIEILRTLYH 70
Query: 89 DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
++++ K K V LV E + + + F Q+ G+ Y
Sbjct: 71 EHIVKYKGCCEDQGE---KSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAY 127
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEY---VVTRWYRAPEL 204
LH+ + +HR L N+L++ + +KI DFGLA+ G+E + WY APE
Sbjct: 128 LHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APEC 186
Query: 205 LLCCDNYGTSIDVWSVGCIFAEIL 228
L C Y S DVWS G E+L
Sbjct: 187 LKECKFYYAS-DVWSFGVTLYELL 209
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
I +G+G +G V C + T VA+K++ + ++ + RE+ +L+ + D
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILKALHSDF 72
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVF--QLLRGLKY 148
++ + V R S + LV E + + + D + ++ Q+ +G++Y
Sbjct: 73 IVKYRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 129
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTR-------WYRA 201
L S +HRDL N+LV + +KI DFGLA+ ++ + YVV WY A
Sbjct: 130 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY---YVVREPGQSPIFWY-A 185
Query: 202 PELLLCCDN-YGTSIDVWSVGCIFAEIL 228
PE L DN + DVWS G + E+
Sbjct: 186 PESL--SDNIFSRQSDVWSFGVVLYELF 211
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
I +G+G +G V C + T VA+K++ + ++ + RE+ +L+ + D
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILKALHSDF 85
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVF--QLLRGLKY 148
++ + V R S + LV E + + + D + ++ Q+ +G++Y
Sbjct: 86 IVKYRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 142
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTR-------WYRA 201
L S +HRDL N+LV + +KI DFGLA+ ++ + YVV WY A
Sbjct: 143 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY---YVVREPGQSPIFWY-A 198
Query: 202 PELLLCCDN-YGTSIDVWSVGCIFAEIL 228
PE L DN + DVWS G + E+
Sbjct: 199 PESL--SDNIFSRQSDVWSFGVVLYELF 224
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 18/204 (8%)
Query: 35 IKPIGRGAYGVVC----SSINRETNEKVAIKKINNVFENRIDALRT--LRELVLLRHIKH 88
I+ +G G +G V N T E VA+K + E LR+ RE+ +LR + H
Sbjct: 13 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALK---EGCGPQLRSGWQREIEILRTLYH 69
Query: 89 DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
++++ K K V LV E + + + F Q+ G+ Y
Sbjct: 70 EHIVKYKGCCEDQGE---KSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAY 126
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEY---VVTRWYRAPEL 204
LH+ + +HR L N+L++ + +KI DFGLA+ G+E + WY APE
Sbjct: 127 LHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APEC 185
Query: 205 LLCCDNYGTSIDVWSVGCIFAEIL 228
L C Y S DVWS G E+L
Sbjct: 186 LKECKFYYAS-DVWSFGVTLYELL 208
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 109/241 (45%), Gaps = 39/241 (16%)
Query: 36 KPIGRGAYG--VVCSSINRETNE-----KVAIKKINNVFENRIDALRTLRELVLLRHI-K 87
KP+G GA+G V+ +I + ++ KVA+K + + + D + E+ +++ I K
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGK 92
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKS----------------SQSL 130
H N+I L + Y++ E +L + +++ + L
Sbjct: 93 HKNIINLLGACTQDGPL-----YVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF- 189
S+ +Q+ RG++YL S +HRDL N+LV + +KI DFGLAR + +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 190 -MTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLKL 245
T + + APE L D Y DVWS G + EI LG P +PG KL
Sbjct: 208 KTTNGRLPVKWMAPEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPGVPVEELFKL 264
Query: 246 I 246
+
Sbjct: 265 L 265
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 109/241 (45%), Gaps = 39/241 (16%)
Query: 36 KPIGRGAYG--VVCSSINRETNE-----KVAIKKINNVFENRIDALRTLRELVLLRHI-K 87
KP+G GA+G V+ +I + ++ KVA+K + + + D + E+ +++ I K
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGK 92
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKS----------------SQSL 130
H N+I L + Y++ E +L + +++ + L
Sbjct: 93 HKNIINLLGACTQDGPL-----YVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF- 189
S+ +Q+ RG++YL S +HRDL N+LV + +KI DFGLAR + +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 190 -MTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLKL 245
T + + APE L D Y DVWS G + EI LG P +PG KL
Sbjct: 208 KTTNGRLPVKWMAPEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPGVPVEELFKL 264
Query: 246 I 246
+
Sbjct: 265 L 265
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 25/208 (12%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
I +G+G +G V C + T VA+K++ + ++ + RE+ +L+ + D
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILKALHSDF 73
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVF--QLLRGLKY 148
++ + V R S + LV E + + + D + ++ Q+ +G++Y
Sbjct: 74 IVKYRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 130
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTR-------WYRA 201
L S +HRDL N+LV + +KI DFGLA+ ++ + YVV WY A
Sbjct: 131 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY---YVVREPGQSPIFWY-A 186
Query: 202 PELLLCCDN-YGTSIDVWSVGCIFAEIL 228
PE L DN + DVWS G + E+
Sbjct: 187 PESL--SDNIFSRQSDVWSFGVVLYELF 212
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIK-HDNVI---A 93
+ G + V + + + + A+K++ + E + A+ ++E+ ++ + H N++ +
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAI--IQEVCFMKKLSGHPNIVQFCS 93
Query: 94 LKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQS---LSNDHCKYFVFQLLRGLKYLH 150
+ + L+ EL L + +K +S LS D +Q R ++++H
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153
Query: 151 SAN--ILHRDLKPGNLLVNANCDLKICDFGLARTS--------RGNEQFMTEYVVTR--- 197
I+HRDLK NLL++ +K+CDFG A T + + E +TR
Sbjct: 154 RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTT 213
Query: 198 -WYRAPELLLCCDNY--GTSIDVWSVGCIF 224
YR PE++ N+ G D+W++GCI
Sbjct: 214 PMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 41/242 (16%)
Query: 36 KPIGRGAYG--VVCSSINRETNE-----KVAIKKINNVFENRIDALRTLRELVLLRHI-K 87
KP+G GA+G V+ +I + ++ KVA+K + + + D + E+ +++ I K
Sbjct: 34 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGK 92
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKS----------------SQSL 130
H N+I L + Y++ E +L + +++ + L
Sbjct: 93 HKNIINLLGACTQDGPL-----YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF- 189
S+ +Q+ RG++YL S +HRDL N+LV + +KI DFGLAR + +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207
Query: 190 --MTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLK 244
+ +W APE L D Y DVWS G + EI LG P +PG K
Sbjct: 208 KTTNGRLPVKWM-APEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPGVPVEELFK 263
Query: 245 LI 246
L+
Sbjct: 264 LL 265
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 109/241 (45%), Gaps = 39/241 (16%)
Query: 36 KPIGRGAYG--VVCSSINRETNE-----KVAIKKINNVFENRIDALRTLRELVLLRHI-K 87
KP+G GA+G V+ +I + ++ KVA+K + + + D + E+ +++ I K
Sbjct: 75 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGK 133
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKS----------------SQSL 130
H N+I L + Y++ E +L + +++ + L
Sbjct: 134 HKNIINLLGACTQDGPL-----YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF- 189
S+ +Q+ RG++YL S +HRDL N+LV + +KI DFGLAR + +
Sbjct: 189 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 248
Query: 190 -MTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLKL 245
T + + APE L D Y DVWS G + EI LG P +PG KL
Sbjct: 249 KTTNGRLPVKWMAPEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPGVPVEELFKL 305
Query: 246 I 246
+
Sbjct: 306 L 306
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 41/242 (16%)
Query: 36 KPIGRGAYG--VVCSSINRETNE-----KVAIKKINNVFENRIDALRTLRELVLLRHI-K 87
KP+G GA+G V+ +I + ++ KVA+K + + + D + E+ +++ I K
Sbjct: 27 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGK 85
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKS----------------SQSL 130
H N+I L + Y++ E +L + +++ + L
Sbjct: 86 HKNIINLLGACTQDGPL-----YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF- 189
S+ +Q+ RG++YL S +HRDL N+LV + +KI DFGLAR + +
Sbjct: 141 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 200
Query: 190 --MTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLK 244
+ +W APE L D Y DVWS G + EI LG P +PG K
Sbjct: 201 KTTNGRLPVKWM-APEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPGVPVEELFK 256
Query: 245 LI 246
L+
Sbjct: 257 LL 258
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 41/242 (16%)
Query: 36 KPIGRGAYG--VVCSSINRETNE-----KVAIKKINNVFENRIDALRTLRELVLLRHI-K 87
KP+G GA+G V+ +I + ++ KVA+K + + + D + E+ +++ I K
Sbjct: 23 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGK 81
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKS----------------SQSL 130
H N+I L + Y++ E +L + +++ + L
Sbjct: 82 HKNIINLLGACTQDGPL-----YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF- 189
S+ +Q+ RG++YL S +HRDL N+LV + +KI DFGLAR + +
Sbjct: 137 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 196
Query: 190 --MTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLK 244
+ +W APE L D Y DVWS G + EI LG P +PG K
Sbjct: 197 KTTNGRLPVKWM-APEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPGVPVEELFK 252
Query: 245 LI 246
L+
Sbjct: 253 LL 254
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE---YV 194
F +Q+ +G+ +L S N +HRDL N+L+ KICDFGLAR + + ++ + +
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 232
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKPIFPG 236
+W APE + C Y DVWS G E+ LG P +PG
Sbjct: 233 PVKW-MAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSP-YPG 273
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 41/242 (16%)
Query: 36 KPIGRGAYG--VVCSSINRETNE-----KVAIKKINNVFENRIDALRTLRELVLLRHI-K 87
KP+G GA+G V+ +I + ++ KVA+K + + + D + E+ +++ I K
Sbjct: 26 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGK 84
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKS----------------SQSL 130
H N+I L + Y++ E +L + +++ + L
Sbjct: 85 HKNIINLLGACTQDGPL-----YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF- 189
S+ +Q+ RG++YL S +HRDL N+LV + +KI DFGLAR + +
Sbjct: 140 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 199
Query: 190 --MTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLK 244
+ +W APE L D Y DVWS G + EI LG P +PG K
Sbjct: 200 KTTNGRLPVKWM-APEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPGVPVEELFK 255
Query: 245 LI 246
L+
Sbjct: 256 LL 257
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE---YV 194
F +Q+ +G+ +L S N +HRDL N+L+ KICDFGLAR + + ++ + +
Sbjct: 168 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 227
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKPIFPG 236
+W APE + C Y DVWS G E+ LG P +PG
Sbjct: 228 PVKW-MAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSP-YPG 268
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 96/227 (42%), Gaps = 34/227 (14%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVL 82
EI+ + I K IG G G VC R ++ VAIK + + R L E +
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER-QRRDFLSEASI 103
Query: 83 LRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ H N+I L+ V+ Y+ +DT L ++ + QL
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT----------FLRTHDGQFTIMQL 153
Query: 143 L-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV 195
+ G++YL +HRDL N+LV++N K+ DFGL+R + Y
Sbjct: 154 VGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD--AAYTT 211
Query: 196 T------RWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
T RW APE + + ++ DVWS G + E+L G +P +
Sbjct: 212 TGGKIPIRWT-APE-AIAFRTFSSASDVWSFGVVMWEVLAYGERPYW 256
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE---YV 194
F +Q+ +G+ +L S N +HRDL N+L+ KICDFGLAR + + ++ + +
Sbjct: 166 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 225
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKPIFPG 236
+W APE + C Y DVWS G E+ LG P +PG
Sbjct: 226 PVKW-MAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSP-YPG 266
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 109/242 (45%), Gaps = 41/242 (16%)
Query: 36 KPIGRGAYG--VVCSSINRETNE-----KVAIKKINNVFENRIDALRTLRELVLLRHI-K 87
KP+G GA+G V+ +I + ++ KVA+K + + + D + E+ +++ I K
Sbjct: 19 KPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEK-DLSDLISEMEMMKMIGK 77
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKS----------------SQSL 130
H N+I L + Y++ E +L + +++ + L
Sbjct: 78 HKNIINLLGACTQDGPL-----YVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF- 189
S+ +Q+ RG++YL S +HRDL N+LV + +KI DFGLAR + +
Sbjct: 133 SSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 192
Query: 190 --MTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLK 244
+ +W APE L D Y DVWS G + EI LG P +PG K
Sbjct: 193 KTTNGRLPVKWM-APEALF--DRIYTHQSDVWSFGVLLWEIFTLGGSP-YPGVPVEELFK 248
Query: 245 LI 246
L+
Sbjct: 249 LL 250
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE---YV 194
F +Q+ +G+ +L S N +HRDL N+L+ KICDFGLAR + + ++ + +
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARL 232
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKPIFPG 236
+W APE + C Y DVWS G E+ LG P +PG
Sbjct: 233 PVKW-MAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSP-YPG 273
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 111 LVYELMDTD-LHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN 169
LV E+ + L++ ++ ++ + + + V Q+ G+KYL +N +HRDL N+L+
Sbjct: 447 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 506
Query: 170 CDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY---GTSIDVWSVGCI 223
KI DFGL++ R +E + +W + APE C NY + DVWS G +
Sbjct: 507 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE----CINYYKFSSKSDVWSFGVL 562
Query: 224 FAEIL--GRKP 232
E G+KP
Sbjct: 563 MWEAFSYGQKP 573
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 12/121 (9%)
Query: 120 LHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGL 179
L++ ++ ++ + + + V Q+ G+KYL +N +HRDL N+L+ KI DFGL
Sbjct: 114 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 173
Query: 180 ARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY---GTSIDVWSVGCIFAEIL--GRK 231
++ R +E + +W + APE C NY + DVWS G + E G+K
Sbjct: 174 SKALRADENYYKAQTHGKWPVKWYAPE----CINYYKFSSKSDVWSFGVLMWEAFSYGQK 229
Query: 232 P 232
P
Sbjct: 230 P 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 12/121 (9%)
Query: 120 LHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGL 179
L++ ++ ++ + + + V Q+ G+KYL +N +HRDL N+L+ KI DFGL
Sbjct: 114 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 173
Query: 180 ARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY---GTSIDVWSVGCIFAEIL--GRK 231
++ R +E + +W + APE C NY + DVWS G + E G+K
Sbjct: 174 SKALRADENYYKAQTHGKWPVKWYAPE----CINYYKFSSKSDVWSFGVLMWEAFSYGQK 229
Query: 232 P 232
P
Sbjct: 230 P 230
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 111 LVYELMDTD-LHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN 169
LV E+ + L++ ++ ++ + + + V Q+ G+KYL +N +HRDL N+L+
Sbjct: 446 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 505
Query: 170 CDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY---GTSIDVWSVGCI 223
KI DFGL++ R +E + +W + APE C NY + DVWS G +
Sbjct: 506 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE----CINYYKFSSKSDVWSFGVL 561
Query: 224 FAEIL--GRKP 232
E G+KP
Sbjct: 562 MWEAFSYGQKP 572
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 111 LVYELMDTD-LHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN 169
LV E+ + L++ ++ ++ + + + V Q+ G+KYL +N +HRDL N+L+
Sbjct: 102 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 161
Query: 170 CDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY---GTSIDVWSVGCI 223
KI DFGL++ R +E + +W + APE C NY + DVWS G +
Sbjct: 162 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE----CINYYKFSSKSDVWSFGVL 217
Query: 224 FAEIL--GRKP 232
E G+KP
Sbjct: 218 MWEAFSYGQKP 228
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE---YV 194
F +Q+ +G+ +L S N +HRDL N+L+ KICDFGLAR + + ++ + +
Sbjct: 150 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 209
Query: 195 VTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKPIFPG 236
+W APE + C Y DVWS G E+ LG P +PG
Sbjct: 210 PVKW-MAPESIFNC-VYTFESDVWSYGIFLWELFSLGSSP-YPG 250
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 111 LVYELMDTD-LHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN 169
LV E+ + L++ ++ ++ + + + V Q+ G+KYL +N +HRDL N+L+
Sbjct: 94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 153
Query: 170 CDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY---GTSIDVWSVGCI 223
KI DFGL++ R +E + +W + APE C NY + DVWS G +
Sbjct: 154 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE----CINYYKFSSKSDVWSFGVL 209
Query: 224 FAEIL--GRKP 232
E G+KP
Sbjct: 210 MWEAFSYGQKP 220
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 111 LVYELMDTD-LHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN 169
LV E+ + L++ ++ ++ + + + V Q+ G+KYL +N +HRDL N+L+
Sbjct: 88 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 147
Query: 170 CDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY---GTSIDVWSVGCI 223
KI DFGL++ R +E + +W + APE C NY + DVWS G +
Sbjct: 148 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE----CINYYKFSSKSDVWSFGVL 203
Query: 224 FAEIL--GRKP 232
E G+KP
Sbjct: 204 MWEAFSYGQKP 214
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 26 FEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+EID K + +K +G G +GVV R + VAIK I E + + E ++
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIK---EGSMSEDEFIEEAKVMM 74
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQI---IKSSQSLSNDHCKYFVFQ 141
++ H+ ++ L V I Y+ + L ++ ++ Q L + CK
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL--EMCK----D 128
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMT--EYVVTRWY 199
+ ++YL S LHRDL N LVN +K+ DFGL+R +E+ + RW
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRW- 187
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKP 232
+P +L + + D+W+ G + EI LG+ P
Sbjct: 188 -SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 12/121 (9%)
Query: 120 LHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGL 179
L++ ++ ++ + + + V Q+ G+KYL +N +HRDL N+L+ KI DFGL
Sbjct: 94 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 153
Query: 180 ARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY---GTSIDVWSVGCIFAEIL--GRK 231
++ R +E + +W + APE C NY + DVWS G + E G+K
Sbjct: 154 SKALRADENYYKAQTHGKWPVKWYAPE----CINYYKFSSKSDVWSFGVLMWEAFSYGQK 209
Query: 232 P 232
P
Sbjct: 210 P 210
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 42/210 (20%)
Query: 119 DLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN-CDLKICDF 177
DL I +L + + F +Q+L +++ H+ +LHRD+K N+L++ N +LK+ DF
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 178 GLARTSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL-GRKPIFPG 236
G + + T++ TR Y PE + +G S VWS+G + +++ G P
Sbjct: 203 GSGALLK--DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--- 257
Query: 237 TECLNQLKLIISVFGTQQEADLEFIDNPKARRFIKSLPYSRGTHISSLYPQADPLALDLL 296
E D E I + + F + S H L+
Sbjct: 258 ------------------EHDEEII---RGQVFFRQRVSSECQH--------------LI 282
Query: 297 QKMLVFEPSKRITVTEALQHPYISGLYDPQ 326
+ L PS R T E HP++ + PQ
Sbjct: 283 RWCLALRPSDRPTFEEIQNHPWMQDVLLPQ 312
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 16/208 (7%)
Query: 38 IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IGRG +G V + + K A+K +N + + + + L E ++++ H NV++L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLSL 95
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKS-SQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ + R + ++ + DL I++ + + + F Q+ +G+KYL S
Sbjct: 96 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE-----YVVTRWYRAPELLLCC 208
+HRDL N +++ +K+ DFGLAR E + +W L
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQ--T 210
Query: 209 DNYGTSIDVWSVGCIFAEILGR-KPIFP 235
+ T DVWS G + E++ R P +P
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 32/221 (14%)
Query: 26 FEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+EID K + +K +G G +GVV R + VAIK I E + + E ++
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIK---EGSMSEDEFIEEAKVMM 59
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQI---IKSSQSLSNDHCKYFVFQ 141
++ H+ ++ L V I Y+ + L ++ ++ Q L + CK
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL--EMCK----D 113
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR--------TSRGNEQFMTEY 193
+ ++YL S LHRDL N LVN +K+ DFGL+R +SRG++
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSK------ 167
Query: 194 VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKP 232
RW +P +L + + D+W+ G + EI LG+ P
Sbjct: 168 FPVRW--SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 111 LVYELMDTD-LHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN 169
LV E+ + L++ ++ ++ + + + V Q+ G+KYL +N +HRDL N+L+
Sbjct: 82 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 141
Query: 170 CDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY---GTSIDVWSVGCI 223
KI DFGL++ R +E + +W + APE C NY + DVWS G +
Sbjct: 142 HYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPE----CINYYKFSSKSDVWSFGVL 197
Query: 224 FAEIL--GRKP 232
E G+KP
Sbjct: 198 MWEAFSYGQKP 208
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 36 KPIGRGAYGVVCSSI-----NRETNEKVAIKKI-NNVFENRIDALRTLRELVLLRHI-KH 88
K +G GA+G V + + KVA+K + + + +AL + EL ++ H+ +H
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL--MSELKIMSHLGQH 109
Query: 89 DNVIAL-------KDVMMPTHRISFKDVY-LVYELMDTDLHQIIKSSQSLSNDHCKYFVF 140
+N++ L V++ T + D+ + + DL + + + L +F
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK--EDGRPLELRDLLHFSS 167
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE---YVVTR 197
Q+ +G+ +L S N +HRD+ N+L+ KI DFGLAR + ++ + + +
Sbjct: 168 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKPIFPG 236
W APE + C Y DVWS G + EI LG P +PG
Sbjct: 228 WM-APESIFDC-VYTVQSDVWSYGILLWEIFSLGLNP-YPG 265
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 105/221 (47%), Gaps = 27/221 (12%)
Query: 36 KPIGRGAYGVVCSSI-----NRETNEKVAIKKI-NNVFENRIDALRTLRELVLLRHI-KH 88
K +G GA+G V + + KVA+K + + + +AL + EL ++ H+ +H
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL--MSELKIMSHLGQH 101
Query: 89 DNVIAL-------KDVMMPTHRISFKDVY-LVYELMDTDLHQIIKSSQSLSNDHCKYFVF 140
+N++ L V++ T + D+ + + DL + + + L +F
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDK--EDGRPLELRDLLHFSS 159
Query: 141 QLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE---YVVTR 197
Q+ +G+ +L S N +HRD+ N+L+ KI DFGLAR + ++ + + +
Sbjct: 160 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKPIFPG 236
W APE + C Y DVWS G + EI LG P +PG
Sbjct: 220 WM-APESIFDC-VYTVQSDVWSYGILLWEIFSLGLNP-YPG 257
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 42/231 (18%)
Query: 27 EIDTKYVPI-KPIGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVL 82
EI+ + I K IG G G VC R ++ VAIK + + R L E +
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER-QRRDFLSEASI 103
Query: 83 LRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
+ H N+I L+ V+ Y+ +DT L ++ + QL
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT----------FLRTHDGQFTIMQL 153
Query: 143 L-------RGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----------TSRG 185
+ G++YL +HRDL N+LV++N K+ DFGL+R T+ G
Sbjct: 154 VGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTG 213
Query: 186 NEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIF 234
+ + RW APE + + ++ DVWS G + E+L G +P +
Sbjct: 214 GK------IPIRWT-APE-AIAFRTFSSASDVWSFGVVMWEVLAYGERPYW 256
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 90/210 (42%), Gaps = 30/210 (14%)
Query: 35 IKPIGRGAYGVVC----SSINRETNEKVAIKKIN--------NVFENRIDALRTLRELVL 82
I+ +G G +G V N T E VA+K + + ++ ID LRTL
Sbjct: 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLY---- 91
Query: 83 LRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
H+++I K S + LV E + + S+ F Q+
Sbjct: 92 -----HEHIIKYKGCCEDAGAASLQ---LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQI 143
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEY---VVTRW 198
G+ YLH+ + +HRDL N+L++ + +KI DFGLA+ G+E + W
Sbjct: 144 CEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFW 203
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAEIL 228
Y APE L Y S DVWS G E+L
Sbjct: 204 Y-APECLKEYKFYYAS-DVWSFGVTLYELL 231
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRTLRELVLLR 84
+T+ +K +G GA+G V I E V AIK +N + + + + E +++
Sbjct: 37 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN-VEFMDEALIMA 95
Query: 85 HIKHDNVIALKDV-MMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDHCKYFVFQ 141
+ H +++ L V + PT + LV +LM L + + ++ + + Q
Sbjct: 96 SMDHPHLVRLLGVCLSPT-------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ 148
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY------VV 195
+ +G+ YL ++HRDL N+LV + +KI DFGLAR G+E+ EY +
Sbjct: 149 IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK---EYNADGGKMP 205
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAEIL--GRKP 232
+W + L C +Y DVWS G E++ G KP
Sbjct: 206 IKW-----MALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 108/242 (44%), Gaps = 41/242 (16%)
Query: 36 KPIGRGAYGVVCSS----INRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHI-K 87
KP+G GA+G V + I+++ ++ VA+K + + + D + E+ +++ I K
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGK 99
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKS----------------SQSL 130
H N+I L + Y++ E +L + +++ + +
Sbjct: 100 HKNIITLLGACTQDGPL-----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF- 189
+ +QL RG++YL S +HRDL N+LV N +KI DFGLAR + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 190 --MTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLK 244
+ +W APE L D Y DVWS G + EI LG P +PG K
Sbjct: 215 KTTNGRLPVKWM-APEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFK 270
Query: 245 LI 246
L+
Sbjct: 271 LL 272
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 31/205 (15%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKIN---------NVFENRIDALRTLRELVLLRHIKH 88
IG G++G V + + VA+K +N F+N + LR R + +L + +
Sbjct: 32 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 89 DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
L V T +Y H + S Q RG+ Y
Sbjct: 89 STAPQLAIV---TQWCEGSSLY----------HHLHASETKFEMKKLIDIARQTARGMDY 135
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLA-RTSR--GNEQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA SR G+ QF W APE++
Sbjct: 136 LHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM-APEVI 194
Query: 206 LCCDN--YGTSIDVWSVGCIFAEIL 228
D+ Y DV++ G + E++
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELM 219
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 29/210 (13%)
Query: 35 IKPIGRGAYGVVCSS--INRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVI 92
++ IG G +G+V +N++ KVAIK I E + + E ++ + H ++
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKD---KVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTD-LHQIIKSSQSL-SNDHCKYFVFQLLRGLKYLH 150
L V + I LV+E M+ L +++ + L + + + G+ YL
Sbjct: 66 QLYGVCLEQAPIC-----LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSRGNEQFMTEYVVTRWYRAPE 203
A+++HRDL N LV N +K+ DFG+ R TS +F ++ +PE
Sbjct: 121 EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA------SPE 174
Query: 204 LLLCCDNYGTSIDVWSVGCIFAEILGRKPI 233
+ Y + DVWS G + E+ I
Sbjct: 175 -VFSFSRYSSKSDVWSFGVLMWEVFSEGKI 203
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 34/222 (15%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRTLRELVLLR 84
+T+ +K +G GA+G V I E V AIK +N + + + + E +++
Sbjct: 14 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN-VEFMDEALIMA 72
Query: 85 HIKHDNVIALKDV-MMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDHCKYFVFQ 141
+ H +++ L V + PT + LV +LM L + + ++ + + Q
Sbjct: 73 SMDHPHLVRLLGVCLSPT-------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ 125
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY------VV 195
+ +G+ YL ++HRDL N+LV + +KI DFGLAR G+E+ EY +
Sbjct: 126 IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK---EYNADGGKMP 182
Query: 196 TRWYRAPELLLCCDNYGT---SIDVWSVGCIFAEIL--GRKP 232
+W + L C +Y DVWS G E++ G KP
Sbjct: 183 IKW-----MALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 26 FEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+EID K + +K +G G +GVV R + VAIK I E + + E ++
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIK---EGSMSEDEFIEEAKVMM 74
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQI---IKSSQSLSNDHCKYFVFQ 141
++ H+ ++ L V I Y+ + L ++ ++ Q L + CK
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL--EMCK----D 128
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNE--QFMTEYVVTRWY 199
+ ++YL S LHRDL N LVN +K+ DFGL+R +E + RW
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW- 187
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKP 232
+P +L + + D+W+ G + EI LG+ P
Sbjct: 188 -SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 108/242 (44%), Gaps = 41/242 (16%)
Query: 36 KPIGRGAYGVVCSS----INRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHI-K 87
KP+G GA+G V + I+++ ++ VA+K + + + D + E+ +++ I K
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGK 99
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKS----------------SQSL 130
H N+I L + Y++ E +L + +++ + +
Sbjct: 100 HKNIINLLGACTQDGPL-----YVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRG---NE 187
+ +QL RG++YL S +HRDL N+LV N +KI DFGLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 188 QFMTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLK 244
+ + +W APE L D Y DVWS G + EI LG P +PG K
Sbjct: 215 KTTNGRLPVKWM-APEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFK 270
Query: 245 LI 246
L+
Sbjct: 271 LL 272
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 108/242 (44%), Gaps = 41/242 (16%)
Query: 36 KPIGRGAYGVVCSS----INRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHI-K 87
KP+G GA+G V + I+++ ++ VA+K + + + D + E+ +++ I K
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGK 99
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKS----------------SQSL 130
H N+I L + Y++ E +L + +++ + +
Sbjct: 100 HKNIINLLGACTQDGPL-----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRG---NE 187
+ +QL RG++YL S +HRDL N+LV N +KI DFGLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 188 QFMTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLK 244
+ + +W APE L D Y DVWS G + EI LG P +PG K
Sbjct: 215 KTTNGRLPVKWM-APEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFK 270
Query: 245 LI 246
L+
Sbjct: 271 LL 272
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 26 FEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+EID K + +K +G G +GVV R + VAIK I E + + E ++
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIK---EGSMSEDEFIEEAKVMM 59
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQI---IKSSQSLSNDHCKYFVFQ 141
++ H+ ++ L V I Y+ + L ++ ++ Q L + CK
Sbjct: 60 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL--EMCK----D 113
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNE--QFMTEYVVTRWY 199
+ ++YL S LHRDL N LVN +K+ DFGL+R +E + RW
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW- 172
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKP 232
+P +L + + D+W+ G + EI LG+ P
Sbjct: 173 -SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Query: 139 VFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF---MTEYVV 195
+QL RG++YL S +HRDL N+LV N +KI DFGLAR + + +
Sbjct: 209 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 268
Query: 196 TRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLKLI 246
+W APE L D Y DVWS G + EI LG P +PG KL+
Sbjct: 269 VKWM-APEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFKLL 318
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 108/242 (44%), Gaps = 41/242 (16%)
Query: 36 KPIGRGAYGVVCSS----INRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHI-K 87
KP+G GA+G V + I+++ ++ VA+K + + + D + E+ +++ I K
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGK 99
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKS----------------SQSL 130
H N+I L + Y++ E +L + +++ + +
Sbjct: 100 HKNIINLLGACTQDGPL-----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM 190
+ +QL RG++YL S +HRDL N+LV N +KI DFGLAR + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 191 TEY---VVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLK 244
+ +W APE L D Y DVWS G + EI LG P +PG K
Sbjct: 215 NTTNGRLPVKWM-APEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFK 270
Query: 245 LI 246
L+
Sbjct: 271 LL 272
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 38 IGRGAYGVVCSSINRETNEK--VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALK 95
+G G +G V + R ++ VAIK + E + D +RE ++ + + ++ L
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 96 DVMMPTHRISFKDVYLVYELMDTD-LHQ-IIKSSQSLSNDHCKYFVFQLLRGLKYLHSAN 153
V + + LV E+ LH+ ++ + + + + Q+ G+KYL N
Sbjct: 77 GV------CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 130
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDN 210
+HRDL N+L+ KI DFGL++ ++ + T +W + APE C N
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE----CIN 186
Query: 211 ---YGTSIDVWSVGCIFAEIL--GRKP 232
+ + DVWS G E L G+KP
Sbjct: 187 FRKFSSRSDVWSYGVTMWEALSYGQKP 213
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 26 FEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+EID K + +K +G G +GVV R + VAIK I E + + E ++
Sbjct: 10 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIK---EGSMSEDEFIEEAKVMM 65
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQI---IKSSQSLSNDHCKYFVFQ 141
++ H+ ++ L V I Y+ + L ++ ++ Q L + CK
Sbjct: 66 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL--EMCK----D 119
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNE--QFMTEYVVTRWY 199
+ ++YL S LHRDL N LVN +K+ DFGL+R +E + RW
Sbjct: 120 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW- 178
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKP 232
+P +L + + D+W+ G + EI LG+ P
Sbjct: 179 -SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 212
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 35/266 (13%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKIN---------NVFENRIDALRTLRELVLLRHIKH 88
IG G++G V + + VA+K +N F+N + LR R + +L + +
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 89 DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
L V T +Y +++T I Q +G+ Y
Sbjct: 73 STAPQLAIV---TQWCEGSSLYHHLHIIETKFEMI----------KLIDIARQTAQGMDY 119
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---RGNEQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA G+ QF W APE++
Sbjct: 120 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM-APEVI 178
Query: 206 LCCDN--YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN 263
D Y DV++ G + E++ + P + N+ ++I V DL + +
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMVGRGYLSPDLSKVRS 236
Query: 264 --PKARRFIKSLPYSRGTHISSLYPQ 287
PKA + + + + L+PQ
Sbjct: 237 NCPKAMKRLMAECLKKKRDERPLFPQ 262
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 20/215 (9%)
Query: 26 FEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLR 84
+EID K + +K +G G +GVV R + VAIK I E + + E ++
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD-VAIKMIK---EGSMSEDEFIEEAKVMM 58
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQI---IKSSQSLSNDHCKYFVFQ 141
++ H+ ++ L V I Y+ + L ++ ++ Q L + CK
Sbjct: 59 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL--EMCK----D 112
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNE--QFMTEYVVTRWY 199
+ ++YL S LHRDL N LVN +K+ DFGL+R +E + RW
Sbjct: 113 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW- 171
Query: 200 RAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKP 232
+P +L + + D+W+ G + EI LG+ P
Sbjct: 172 -SPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 205
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 111/240 (46%), Gaps = 37/240 (15%)
Query: 36 KPIGRGAYGVVCSS----INRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHI-K 87
KP+G GA+G V + I+++ ++ VA+K + + + D + E+ +++ I K
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGK 99
Query: 88 HDNVIALKDVMM---PTHRI-SFKDVYLVYELMDT----------DLHQIIKSSQSLSN- 132
H N+I L P + I ++ + E + D++++ + + +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 133 DHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF--- 189
C Y QL RG++YL S +HRDL N+LV N +KI DFGLAR + +
Sbjct: 160 VSCTY---QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 190 MTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLKLI 246
+ +W APE L D Y DVWS G + EI LG P +PG KL+
Sbjct: 217 TNGRLPVKWM-APEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFKLL 272
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Query: 139 VFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF---MTEYVV 195
+QL RG++YL S +HRDL N+LV N +KI DFGLAR + + +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 196 TRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLKLI 246
+W APE L D Y DVWS G + EI LG P +PG KL+
Sbjct: 223 VKWM-APEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFKLL 272
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Query: 139 VFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF---MTEYVV 195
+QL RG++YL S +HRDL N+LV N +KI DFGLAR + + +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 196 TRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLKLI 246
+W APE L D Y DVWS G + EI LG P +PG KL+
Sbjct: 223 VKWM-APEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFKLL 272
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 126 SSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRG 185
++ +LS+ +F + RG+ YL +HRDL N+LV N KI DFGL SRG
Sbjct: 135 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL---SRG 191
Query: 186 NEQFMTEYVV---TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKPIFPGTEC 239
E ++ + + RW L Y T+ DVWS G + EI LG P + G C
Sbjct: 192 QEVYVKKTMGRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIVSLGGTP-YCGMTC 247
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 154/389 (39%), Gaps = 82/389 (21%)
Query: 6 EPPNGMKSRGKHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINN 65
E PN G H + LF + +Y I+ +G G + V S + + + VA+K + +
Sbjct: 16 EDPNDYCKGGYHLVKI-GDLF--NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS 72
Query: 66 VFENRIDALRTLRELVLLRHIKHDN-----VIALKDVMMPTHRISFKDVYLVYELMDTDL 120
AL +R L +R+ ++ V+ L D + ++ + +V+E++ L
Sbjct: 73 AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS-GVNGTHICMVFEVLGHHL 131
Query: 121 HQ-IIKSS-QSLSNDHCKYFVFQLLRGLKYLHS-ANILHRDLKPGNLLVNAN-------- 169
+ IIKS+ Q L K + Q+L+GL YLH+ I+H D+KP N+L++ N
Sbjct: 132 LKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLA 191
Query: 170 -----------------------------------------CDLKICDFGLARTSRGNEQ 188
+KI D G A +
Sbjct: 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVH---K 248
Query: 189 FMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIF---PGTECL---NQ 242
TE + TR YR+ E+L+ Y T D+WS C+ E+ +F G E +
Sbjct: 249 HFTEDIQTRQYRSLEVLIGS-GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDH 307
Query: 243 LKLIISVFG-------TQQEADLEFIDNPKARRFIKSL-PYSRGTHISSLYPQADPLA-- 292
+ LII + G + EF + I L P+ + Y + A
Sbjct: 308 IALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAG 367
Query: 293 -LDLLQKMLVFEPSKRITVTEALQHPYIS 320
D L ML P KR T E L+HP+++
Sbjct: 368 FTDFLLPMLELIPEKRATAAECLRHPWLN 396
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 38 IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IGRG +G V + + K A+K +N + + + + L E ++++ H NV++L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLSL 155
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKS-SQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ + R + ++ + DL I++ + + + F Q+ +G+K+L S
Sbjct: 156 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 212
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVT------RWYRAPELLLC 207
+HRDL N +++ +K+ DFGLAR +++F + + T +W L
Sbjct: 213 FVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEFDSVHNKTGAKLPVKWMALESLQ-- 269
Query: 208 CDNYGTSIDVWSVGCIFAEILGR-KPIFP 235
+ T DVWS G + E++ R P +P
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 298
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 126 SSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRG 185
++ +LS+ +F + RG+ YL +HRDL N+LV N KI DFGL SRG
Sbjct: 125 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL---SRG 181
Query: 186 NEQFMTEYVV---TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKPIFPGTEC 239
E ++ + + RW L Y T+ DVWS G + EI LG P + G C
Sbjct: 182 QEVYVKKTMGRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIVSLGGTP-YCGMTC 237
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 139 VFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF--MTEYVVT 196
+QL RG++YL S +HRDL N+LV N +KI DFGLAR + + T +
Sbjct: 163 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 197 RWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLKLI 246
+ APE L D Y DVWS G + EI LG P +PG KL+
Sbjct: 223 VKWMAPEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFKLL 272
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 31/205 (15%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKIN---------NVFENRIDALRTLRELVLLRHIKH 88
IG G++G V + + VA+K +N F+N + LR R + +L + +
Sbjct: 32 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 89 DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
L V T +Y H + S Q RG+ Y
Sbjct: 89 STKPQLAIV---TQWCEGSSLY----------HHLHASETKFEMKKLIDIARQTARGMDY 135
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLA-RTSR--GNEQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA SR G+ QF W APE++
Sbjct: 136 LHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM-APEVI 194
Query: 206 LCCDN--YGTSIDVWSVGCIFAEIL 228
D+ Y DV++ G + E++
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELM 219
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 139 VFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF--MTEYVVT 196
+QL RG++YL S +HRDL N+LV N +KI DFGLAR + + T +
Sbjct: 150 TYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 209
Query: 197 RWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLKLI 246
+ APE L D Y DVWS G + EI LG P +PG KL+
Sbjct: 210 VKWMAPEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFKLL 259
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 13/131 (9%)
Query: 111 LVYELMDTD-LHQIIKSSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNAN 169
LV E+ + L++ ++ ++ + + + V Q+ G+KYL +N +HRDL N+L+
Sbjct: 88 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 147
Query: 170 CDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDNY---GTSIDVWSVGCI 223
KI DFGL++ R +E +W + APE C NY + DVWS G +
Sbjct: 148 HYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPE----CINYYKFSSKSDVWSFGVL 203
Query: 224 FAEIL--GRKP 232
E G+KP
Sbjct: 204 MWEAFSYGQKP 214
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 139 VFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF--MTEYVVT 196
+QL RG++YL S +HRDL N+LV N +KI DFGLAR + + T +
Sbjct: 152 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 211
Query: 197 RWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLKLI 246
+ APE L D Y DVWS G + EI LG P +PG KL+
Sbjct: 212 VKWMAPEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFKLL 261
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 57/113 (50%), Gaps = 8/113 (7%)
Query: 139 VFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF--MTEYVVT 196
+QL RG++YL S +HRDL N+LV N +KI DFGLAR + + T +
Sbjct: 155 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 214
Query: 197 RWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLKLI 246
+ APE L D Y DVWS G + EI LG P +PG KL+
Sbjct: 215 VKWMAPEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFKLL 264
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 113/259 (43%), Gaps = 53/259 (20%)
Query: 36 KPIGRGAYGVVCSSINRETNEK-VAIKKINNVFENRIDALRT---LRELVLLRHI-KHDN 90
K +G GA+G V ++ ++ V+I+ + + + D+ + EL ++ + H+N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 91 VIALKDVMMPTHRISFKDVYLVYELM-DTDLHQIIKSS-QSLSNDHCKY----------- 137
++ L + I YL++E DL ++S + S D +Y
Sbjct: 111 IVNLLGACTLSGPI-----YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 138 -----------FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLAR----- 181
F +Q+ +G+++L + +HRDL N+LV +KICDFGLAR
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD 225
Query: 182 ---TSRGNEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKPIFPG 236
RGN + +++ APE L Y DVWS G + EI LG P +PG
Sbjct: 226 SNYVVRGNARLPVKWM------APESLF-EGIYTIKSDVWSYGILLWEIFSLGVNP-YPG 277
Query: 237 TEC-LNQLKLIISVFGTQQ 254
N KLI + F Q
Sbjct: 278 IPVDANFYKLIQNGFKMDQ 296
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 31/205 (15%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKIN---------NVFENRIDALRTLRELVLLRHIKH 88
IG G++G V + + VA+K +N F+N + LR R + +L + +
Sbjct: 20 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 89 DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
L V T +Y H + S Q RG+ Y
Sbjct: 77 STKPQLAIV---TQWCEGSSLY----------HHLHASETKFEMKKLIDIARQTARGMDY 123
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---RGNEQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA G+ QF W APE++
Sbjct: 124 LHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM-APEVI 182
Query: 206 LCCDN--YGTSIDVWSVGCIFAEIL 228
D+ Y DV++ G + E++
Sbjct: 183 RMQDSNPYSFQSDVYAFGIVLYELM 207
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 23/207 (11%)
Query: 38 IGRGAYGVVCSSINRETNEK--VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALK 95
+G G +G V + R ++ VAIK + E + D +RE ++ + + ++ L
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 96 DVMMPTHRISFKDVYLVYELMDTD-LHQ-IIKSSQSLSNDHCKYFVFQLLRGLKYLHSAN 153
V + + LV E+ LH+ ++ + + + + Q+ G+KYL N
Sbjct: 403 GV------CQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 456
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRW---YRAPELLLCCDN 210
+HR+L N+L+ KI DFGL++ ++ + T +W + APE C N
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPE----CIN 512
Query: 211 ---YGTSIDVWSVGCIFAEIL--GRKP 232
+ + DVWS G E L G+KP
Sbjct: 513 FRKFSSRSDVWSYGVTMWEALSYGQKP 539
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 104/225 (46%), Gaps = 29/225 (12%)
Query: 36 KPIGRGAYGVVCSSI-----NRETNEKVAIKKI-NNVFENRIDALRTLRELVLLRHI-KH 88
K +G GA+G V + + KVA+K + + + +AL + EL ++ H+ +H
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL--MSELKIMSHLGQH 109
Query: 89 DNVIAL-------KDVMMPTHRISFKDVYLVYEL-----MDTDLHQIIKSSQSLSNDHCK 136
+N++ L V++ T + D+ ++ + + LS+
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE---Y 193
+F Q+ +G+ +L S N +HRD+ N+L+ KI DFGLAR + ++ +
Sbjct: 170 HFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 229
Query: 194 VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKPIFPG 236
+ +W APE + C Y DVWS G + EI LG P +PG
Sbjct: 230 LPVKW-MAPESIFDC-VYTVQSDVWSYGILLWEIFSLGLNP-YPG 271
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 38 IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IGRG +G V + + K A+K +N + + + + L E ++++ H NV++L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLSL 96
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKS-SQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ + R + ++ + DL I++ + + + F Q+ +G+K+L S
Sbjct: 97 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVT------RWYRAPELLLC 207
+HRDL N +++ +K+ DFGLAR +++F + + T +W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEFDSVHNKTGAKLPVKWMALESLQ-- 210
Query: 208 CDNYGTSIDVWSVGCIFAEILGR-KPIFP 235
+ T DVWS G + E++ R P +P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 38 IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IGRG +G V + + K A+K +N + + + + L E ++++ H NV++L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLSL 101
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKS-SQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ + R + ++ + DL I++ + + + F Q+ +G+K+L S
Sbjct: 102 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 158
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVT------RWYRAPELLLC 207
+HRDL N +++ +K+ DFGLAR +++F + + T +W L
Sbjct: 159 FVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEFDSVHNKTGAKLPVKWMALESLQ-- 215
Query: 208 CDNYGTSIDVWSVGCIFAEILGR-KPIFP 235
+ T DVWS G + E++ R P +P
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 244
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 38 IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IGRG +G V + + K A+K +N + + + + L E ++++ H NV++L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLSL 96
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKS-SQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ + R + ++ + DL I++ + + + F Q+ +G+K+L S
Sbjct: 97 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 153
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVT------RWYRAPELLLC 207
+HRDL N +++ +K+ DFGLAR +++F + + T +W L
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEFDSVHNKTGAKLPVKWMALESLQ-- 210
Query: 208 CDNYGTSIDVWSVGCIFAEILGR-KPIFP 235
+ T DVWS G + E++ R P +P
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 146/367 (39%), Gaps = 79/367 (21%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIK 87
+ +Y I+ +G G + V S + + + VA+K + + AL +R L +R+
Sbjct: 19 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSD 78
Query: 88 HDN-----VIALKDVMMPTHRISFKDVYLVYELMDTDLHQ-IIKSS-QSLSNDHCKYFVF 140
++ V+ L D + ++ + +V+E++ L + IIKS+ Q L K +
Sbjct: 79 PNDPNREMVVQLLDDFKIS-GVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQ 137
Query: 141 QLLRGLKYLHS-ANILHRDLKPGNLLVNAN------------------------------ 169
Q+L+GL YLH+ I+H D+KP N+L++ N
Sbjct: 138 QVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTA 197
Query: 170 -------------------CDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCDN 210
+KI D G A + TE + TR YR+ E+L+
Sbjct: 198 PATAGNFLVNPLEPKNAEKLKVKIADLGNACWVH---KHFTEDIQTRQYRSLEVLI-GSG 253
Query: 211 YGTSIDVWSVGCIFAEILGRKPIF---PGTECL---NQLKLIISVFG-------TQQEAD 257
Y T D+WS C+ E+ +F G E + + LII + G +
Sbjct: 254 YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYS 313
Query: 258 LEFIDNPKARRFIKSL-PYSRGTHISSLYPQADPLAL---DLLQKMLVFEPSKRITVTEA 313
EF + I L P+ + Y + A D L ML P KR T E
Sbjct: 314 KEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAEC 373
Query: 314 LQHPYIS 320
L+HP+++
Sbjct: 374 LRHPWLN 380
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 113/266 (42%), Gaps = 35/266 (13%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKIN---------NVFENRIDALRTLRELVLLRHIKH 88
IG G++G V + + VA+K +N F+N + LR R + +L + +
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 89 DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
L V T +Y +++T I Q +G+ Y
Sbjct: 73 STKPQLAIV---TQWCEGSSLYHHLHIIETKFEMI----------KLIDIARQTAQGMDY 119
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLA-RTSR--GNEQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA SR G+ QF W APE++
Sbjct: 120 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM-APEVI 178
Query: 206 LCCDN--YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN 263
D Y DV++ G + E++ + P + N+ ++I V DL + +
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMVGRGYLSPDLSKVRS 236
Query: 264 --PKARRFIKSLPYSRGTHISSLYPQ 287
PKA + + + + L+PQ
Sbjct: 237 NCPKAMKRLMAECLKKKRDERPLFPQ 262
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 35/266 (13%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKIN---------NVFENRIDALRTLRELVLLRHIKH 88
IG G++G V + + VA+K +N F+N + LR R + +L + +
Sbjct: 21 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 89 DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
L V T +Y +++T I Q +G+ Y
Sbjct: 78 STKPQLAIV---TQWCEGSSLYHHLHIIETKFEMI----------KLIDIARQTAQGMDY 124
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---RGNEQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA G+ QF W APE++
Sbjct: 125 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM-APEVI 183
Query: 206 LCCDN--YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN 263
D Y DV++ G + E++ + P + N+ ++I V DL + +
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMVGRGYLSPDLSKVRS 241
Query: 264 --PKARRFIKSLPYSRGTHISSLYPQ 287
PKA + + + + L+PQ
Sbjct: 242 NCPKAMKRLMAECLKKKRDERPLFPQ 267
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 35/266 (13%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKIN---------NVFENRIDALRTLRELVLLRHIKH 88
IG G++G V + + VA+K +N F+N + LR R + +L + +
Sbjct: 16 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 89 DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
L V T +Y +++T I Q +G+ Y
Sbjct: 73 STKPQLAIV---TQWCEGSSLYHHLHIIETKFEMI----------KLIDIARQTAQGMDY 119
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---RGNEQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA G+ QF W APE++
Sbjct: 120 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM-APEVI 178
Query: 206 LCCDN--YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN 263
D Y DV++ G + E++ + P + N+ ++I V DL + +
Sbjct: 179 RMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMVGRGYLSPDLSKVRS 236
Query: 264 --PKARRFIKSLPYSRGTHISSLYPQ 287
PKA + + + + L+PQ
Sbjct: 237 NCPKAMKRLMAECLKKKRDERPLFPQ 262
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 35/266 (13%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKIN---------NVFENRIDALRTLRELVLLRHIKH 88
IG G++G V + + VA+K +N F+N + LR R + +L + +
Sbjct: 18 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 89 DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
L V T +Y +++T I Q +G+ Y
Sbjct: 75 STKPQLAIV---TQWCEGSSLYHHLHIIETKFEMI----------KLIDIARQTAQGMDY 121
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---RGNEQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA G+ QF W APE++
Sbjct: 122 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM-APEVI 180
Query: 206 LCCDN--YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN 263
D Y DV++ G + E++ + P + N+ ++I V DL + +
Sbjct: 181 RMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMVGRGYLSPDLSKVRS 238
Query: 264 --PKARRFIKSLPYSRGTHISSLYPQ 287
PKA + + + + L+PQ
Sbjct: 239 NCPKAMKRLMAECLKKKRDERPLFPQ 264
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 41/242 (16%)
Query: 36 KPIGRGAYGVVCSS----INRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHI-K 87
KP+G GA+G V + I+++ ++ VA+K + + + D + E+ +++ I K
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEMMKMIGK 99
Query: 88 HDNVIALKDVMMPTHRISFKDVYLVYELMDT-DLHQIIKS----------------SQSL 130
H N+I L + Y++ E +L + +++ + +
Sbjct: 100 HKNIINLLGACTQDGPL-----YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 131 SNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF- 189
+ +QL RG++YL S +HRDL N+LV N ++I DFGLAR + +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYK 214
Query: 190 --MTEYVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTECLNQLK 244
+ +W APE L D Y DVWS G + EI LG P +PG K
Sbjct: 215 KTTNGRLPVKWM-APEALF--DRVYTHQSDVWSFGVLMWEIFTLGGSP-YPGIPVEELFK 270
Query: 245 LI 246
L+
Sbjct: 271 LL 272
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 38 IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IGRG +G V + + K A+K +N + + + + L E ++++ H NV++L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLSL 97
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKS-SQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ + R + ++ + DL I++ + + + F Q+ +G+K+L S
Sbjct: 98 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVT------RWYRAPELLLC 207
+HRDL N +++ +K+ DFGLAR +++F + + T +W L
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEFDSVHNKTGAKLPVKWMALESLQ-- 211
Query: 208 CDNYGTSIDVWSVGCIFAEILGR-KPIFP 235
+ T DVWS G + E++ R P +P
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 35/266 (13%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKIN---------NVFENRIDALRTLRELVLLRHIKH 88
IG G++G V + + VA+K +N F+N + LR R + +L + +
Sbjct: 21 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 89 DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
L V T +Y +++T I Q +G+ Y
Sbjct: 78 STKPQLAIV---TQWCEGSSLYHHLHIIETKFEMI----------KLIDIARQTAQGMDY 124
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---RGNEQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA G+ QF W APE++
Sbjct: 125 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM-APEVI 183
Query: 206 LCCDN--YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN 263
D Y DV++ G + E++ + P + N+ ++I V DL + +
Sbjct: 184 RMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMVGRGYLSPDLSKVRS 241
Query: 264 --PKARRFIKSLPYSRGTHISSLYPQ 287
PKA + + + + L+PQ
Sbjct: 242 NCPKAMKRLMAECLKKKRDERPLFPQ 267
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 10 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 68
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 69 LDEAYVMASVDNPHVCRLLGICLTS------TVQLIMQLMPFGCLLDYVREHKDNIGSQY 122
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 123 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 179
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 180 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 38 IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IGRG +G V + + K A+K +N + + + + L E ++++ H NV++L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLSL 97
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKS-SQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ + R + ++ + DL I++ + + + F Q+ +G+K+L S
Sbjct: 98 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVT------RWYRAPELLLC 207
+HRDL N +++ +K+ DFGLAR +++F + + T +W L
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDML-DKEFDSVHNKTGAKLPVKWMALESLQ-- 211
Query: 208 CDNYGTSIDVWSVGCIFAEILGR-KPIFP 235
+ T DVWS G + E++ R P +P
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 18/209 (8%)
Query: 38 IGRGAYGVVCSSINRETNEK---VAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
IGRG +G V + + K A+K +N + + + + L E ++++ H NV++L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG-EVSQFLTEGIIMKDFSHPNVLSL 94
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQIIKS-SQSLSNDHCKYFVFQLLRGLKYLHSAN 153
+ + R + ++ + DL I++ + + + F Q+ +G+K+L S
Sbjct: 95 LGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 151
Query: 154 ILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVT------RWYRAPELLLC 207
+HRDL N +++ +K+ DFGLAR +++F + + T +W L
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMY-DKEFDSVHNKTGAKLPVKWMALESLQ-- 208
Query: 208 CDNYGTSIDVWSVGCIFAEILGR-KPIFP 235
+ T DVWS G + E++ R P +P
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 113/266 (42%), Gaps = 35/266 (13%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKIN---------NVFENRIDALRTLRELVLLRHIKH 88
IG G++G V + + VA+K +N F+N + LR R + +L + +
Sbjct: 36 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 89 DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
L V T +Y +++T I Q +G+ Y
Sbjct: 93 STKPQLAIV---TQWCEGSSLYHHLHIIETKFEMI----------KLIDIARQTAQGMDY 139
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLA-RTSR--GNEQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA SR G+ QF W APE++
Sbjct: 140 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM-APEVI 198
Query: 206 LCCDN--YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN 263
D Y DV++ G + E++ + P + N+ ++I V DL + +
Sbjct: 199 RMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMVGRGYLSPDLSKVRS 256
Query: 264 --PKARRFIKSLPYSRGTHISSLYPQ 287
PKA + + + + L+PQ
Sbjct: 257 NCPKAMKRLMAECLKKKRDERPLFPQ 282
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 113/266 (42%), Gaps = 35/266 (13%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKIN---------NVFENRIDALRTLRELVLLRHIKH 88
IG G++G V + + VA+K +N F+N + LR R + +L + +
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 89 DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
L V T +Y +++T I Q +G+ Y
Sbjct: 101 STKPQLAIV---TQWCEGSSLYHHLHIIETKFEMI----------KLIDIARQTAQGMDY 147
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLA-RTSR--GNEQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA SR G+ QF W APE++
Sbjct: 148 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM-APEVI 206
Query: 206 LCCDN--YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN 263
D Y DV++ G + E++ + P + N+ ++I V DL + +
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMVGRGYLSPDLSKVRS 264
Query: 264 --PKARRFIKSLPYSRGTHISSLYPQ 287
PKA + + + + L+PQ
Sbjct: 265 NCPKAMKRLMAECLKKKRDERPLFPQ 290
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 21/231 (9%)
Query: 19 YTMWQTL-FEIDTKYVPI-KPIGRGAYGVVCSSINRETNE---KVAIKKINNVFENRIDA 73
YTM T +EI + + + + IG G +G V I VAIK N + +
Sbjct: 377 YTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE 436
Query: 74 LRTLRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMD-TDLHQIIKSSQ-SLS 131
+ L+E + +R H +++ L V I+ V+++ EL +L ++ + SL
Sbjct: 437 -KFLQEALTMRQFDHPHIVKLIGV------ITENPVWIIMELCTLGELRSFLQVRKFSLD 489
Query: 132 NDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMT 191
+ +QL L YL S +HRD+ N+LV++N +K+ DFGL+R + +
Sbjct: 490 LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 549
Query: 192 E--YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIFPGTE 238
+ +W APE + + ++ DVW G EIL G KP F G +
Sbjct: 550 SKGKLPIKWM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVK 597
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 6 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 64
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGXLLDYVREHKDNIGSQY 118
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 175
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 176 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 7 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 65
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 66 LDEAYVMASVDNPHVCRLLGICLTS------TVQLIMQLMPFGXLLDYVREHKDNIGSQY 119
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 120 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 176
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 177 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 6 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 64
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTS------TVQLIMQLMPFGCLLDYVREHKDNIGSQY 118
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 175
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 176 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 35 IKPIGRGAYGVVCSS--INRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVI 92
++ IG G +G+V +N++ KVAIK I E + + E ++ + H ++
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKD---KVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTD-LHQIIKSSQSL-SNDHCKYFVFQLLRGLKYLH 150
L V + I LV+E M+ L +++ + L + + + G+ YL
Sbjct: 66 QLYGVCLEQAPIC-----LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 120
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSRGNEQFMTEYVVTRWYRAPE 203
A ++HRDL N LV N +K+ DFG+ R TS +F ++ +PE
Sbjct: 121 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA------SPE 174
Query: 204 LLLCCDNYGTSIDVWSVGCIFAEILGRKPI 233
+ Y + DVWS G + E+ I
Sbjct: 175 -VFSFSRYSSKSDVWSFGVLMWEVFSEGKI 203
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 9 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 67
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 68 LDEAYVMASVDNPHVCRLLGICLTS------TVQLIMQLMPFGCLLDYVREHKDNIGSQY 121
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 122 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 178
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 179 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 16 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 74
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 75 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 128
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 129 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 185
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 186 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 229
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 35 IKPIGRGAYGVVCSS--INRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVI 92
++ IG G +G+V +N++ KVAIK I E + + E ++ + H ++
Sbjct: 15 VQEIGSGQFGLVHLGYWLNKD---KVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLV 68
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTD-LHQIIKSSQSL-SNDHCKYFVFQLLRGLKYLH 150
L V + I LV+E M+ L +++ + L + + + G+ YL
Sbjct: 69 QLYGVCLEQAPIC-----LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 123
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSRGNEQFMTEYVVTRWYRAPE 203
A ++HRDL N LV N +K+ DFG+ R TS +F ++ +PE
Sbjct: 124 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA------SPE 177
Query: 204 LLLCCDNYGTSIDVWSVGCIFAEILGRKPI 233
+ Y + DVWS G + E+ I
Sbjct: 178 -VFSFSRYSSKSDVWSFGVLMWEVFSEGKI 206
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 12 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 70
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 71 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 124
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 125 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 181
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 182 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 225
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 8 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 66
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLTS------TVQLIMQLMPFGCLLDYVREHKDNIGSQY 120
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 121 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 177
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 178 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 31 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 89
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 90 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 143
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 144 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 200
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 201 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 244
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 35/266 (13%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKIN---------NVFENRIDALRTLRELVLLRHIKH 88
IG G++G V + + VA+K +N F+N + LR R + +L + +
Sbjct: 44 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 89 DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
L V T +Y +++T I Q +G+ Y
Sbjct: 101 STKPQLAIV---TQWCEGSSLYHHLHIIETKFEMI----------KLIDIARQTAQGMDY 147
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---RGNEQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA G+ QF W APE++
Sbjct: 148 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM-APEVI 206
Query: 206 LCCDN--YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN 263
D Y DV++ G + E++ + P + N+ ++I V DL + +
Sbjct: 207 RMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMVGRGYLSPDLSKVRS 264
Query: 264 --PKARRFIKSLPYSRGTHISSLYPQ 287
PKA + + + + L+PQ
Sbjct: 265 NCPKAMKRLMAECLKKKRDERPLFPQ 290
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 7 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 65
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 66 LDEAYVMASVDNPHVCRLLGICLTS------TVQLIMQLMPFGCLLDYVREHKDNIGSQY 119
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 120 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 176
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 177 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 220
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 9 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 67
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 68 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 121
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 122 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 178
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 179 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 111/266 (41%), Gaps = 35/266 (13%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKIN---------NVFENRIDALRTLRELVLLRHIKH 88
IG G++G V + + VA+K +N F+N + LR R + +L + +
Sbjct: 43 IGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 89 DNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKY 148
L V T +Y +++T I Q +G+ Y
Sbjct: 100 STKPQLAIV---TQWCEGSSLYHHLHIIETKFEMI----------KLIDIARQTAQGMDY 146
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTS---RGNEQFMTEYVVTRWYRAPELL 205
LH+ +I+HRDLK N+ ++ + +KI DFGLA G+ QF W APE++
Sbjct: 147 LHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM-APEVI 205
Query: 206 LCCDN--YGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADLEFIDN 263
D Y DV++ G + E++ + P + N+ ++I V DL + +
Sbjct: 206 RMQDKNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIFMVGRGYLSPDLSKVRS 263
Query: 264 --PKARRFIKSLPYSRGTHISSLYPQ 287
PKA + + + + L+PQ
Sbjct: 264 NCPKAMKRLMAECLKKKRDERPLFPQ 289
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 9 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 67
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 68 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 121
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 122 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 178
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 179 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 35 IKPIGRGAYGVVCSS--INRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVI 92
++ IG G +G+V +N++ KVAIK I E + + E ++ + H ++
Sbjct: 10 VQEIGSGQFGLVHLGYWLNKD---KVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLV 63
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTD-LHQIIKSSQSL-SNDHCKYFVFQLLRGLKYLH 150
L V + I LV+E M+ L +++ + L + + + G+ YL
Sbjct: 64 QLYGVCLEQAPIC-----LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 118
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSRGNEQFMTEYVVTRWYRAPE 203
A ++HRDL N LV N +K+ DFG+ R TS +F ++ +PE
Sbjct: 119 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA------SPE 172
Query: 204 LLLCCDNYGTSIDVWSVGCIFAEILGRKPI 233
+ Y + DVWS G + E+ I
Sbjct: 173 -VFSFSRYSSKSDVWSFGVLMWEVFSEGKI 201
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 8 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 66
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 120
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 121 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 177
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 178 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 6 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 64
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 118
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 175
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 176 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 13 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 71
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 72 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 125
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 126 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 182
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 183 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 9 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 67
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 68 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 121
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 122 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 178
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 179 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 222
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 43/244 (17%)
Query: 36 KPIGRGAYGVV----CSSINRETNEK-VAIKKINN-VFENRIDALRTLRELVLLRHIKHD 89
+ +G GA+G V C +++ ++ VA+K + + R D RE LL +++H+
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKD---FQREAELLTNLQHE 77
Query: 90 NVIALKDVMMPTHRISFKDVYLVYELMD-TDLHQIIKS----------------SQSLSN 132
+++ V + +V+E M DL++ +++ L
Sbjct: 78 HIVKFYGVCGDG-----DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGL 132
Query: 133 DHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMT- 191
+ Q+ G+ YL S + +HRDL N LV AN +KI DFG++R + +
Sbjct: 133 SQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVG 192
Query: 192 --EYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIFPGT-----ECLNQ 242
+ RW PE ++ + T DVWS G I EI G++P F + EC+ Q
Sbjct: 193 GHTMLPIRWM-PPESIM-YRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ 250
Query: 243 LKLI 246
+++
Sbjct: 251 GRVL 254
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 29/210 (13%)
Query: 35 IKPIGRGAYGVVCSS--INRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVI 92
++ IG G +G+V +N++ KVAIK I E + + E ++ + H ++
Sbjct: 32 VQEIGSGQFGLVHLGYWLNKD---KVAIKTIK---EGSMSEDDFIEEAEVMMKLSHPKLV 85
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTD-LHQIIKSSQSL-SNDHCKYFVFQLLRGLKYLH 150
L V + I LV+E M+ L +++ + L + + + G+ YL
Sbjct: 86 QLYGVCLEQAPIC-----LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 140
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSRGNEQFMTEYVVTRWYRAPE 203
A ++HRDL N LV N +K+ DFG+ R TS +F ++ +PE
Sbjct: 141 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA------SPE 194
Query: 204 LLLCCDNYGTSIDVWSVGCIFAEILGRKPI 233
+ Y + DVWS G + E+ I
Sbjct: 195 -VFSFSRYSSKSDVWSFGVLMWEVFSEGKI 223
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 26 FEIDTKYVPI-KPIGRGAYGVVCSSINRETNE---KVAIKKINNVFENRIDALRTLRELV 81
+EI + + + + IG G +G V I VAIK N + + + L+E +
Sbjct: 7 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEAL 65
Query: 82 LLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMD-TDLHQIIKSSQ-SLSNDHCKYFV 139
+R H +++ L V I+ V+++ EL +L ++ + SL +
Sbjct: 66 TMRQFDHPHIVKLIGV------ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 119
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE--YVVTR 197
+QL L YL S +HRD+ N+LV++N +K+ DFGL+R + + + +
Sbjct: 120 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 179
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIFPGTE 238
W APE + + ++ DVW G EIL G KP F G +
Sbjct: 180 WM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVK 219
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%), Gaps = 19/218 (8%)
Query: 26 FEIDTKYVPI-KPIGRGAYGVVCSSINRETNE---KVAIKKINNVFENRIDALRTLRELV 81
+EI + + + + IG G +G V I VAIK N + + + L+E +
Sbjct: 33 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEAL 91
Query: 82 LLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMD-TDLHQIIKSSQ-SLSNDHCKYFV 139
+R H +++ L V I+ V+++ EL +L ++ + SL +
Sbjct: 92 TMRQFDHPHIVKLIGV------ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 145
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE--YVVTR 197
+QL L YL S +HRD+ N+LV++N +K+ DFGL+R + + + +
Sbjct: 146 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 205
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPI 233
W APE + + ++ DVW G EIL G KP
Sbjct: 206 WM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKPF 241
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 13/106 (12%)
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMT--- 191
C + Q+ +++LHS ++HRDLKP N+ + +K+ DFGL +E+ T
Sbjct: 166 CLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 192 ---------EYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL 228
V T+ Y +PE + +NY +D++S+G I E+L
Sbjct: 226 PMPAYATHXGQVGTKLYMSPE-QIHGNNYSHKVDIFSLGLILFELL 270
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 30 TKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENR-IDALRTLRELVLLRHIKH 88
T + PI+ +GRG +GVV + N+ + AIK+I NR + + +RE+ L ++H
Sbjct: 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIR--LPNRELAREKVMREVKALAKLEH 63
Query: 89 DNVI 92
++
Sbjct: 64 PGIV 67
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 10/115 (8%)
Query: 130 LSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF 189
L+ +H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR + +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 190 MTE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
+ + + +W APE + D Y DVWS G + EI LG P +PG +
Sbjct: 250 VRKGDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 300
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 91/205 (44%), Gaps = 19/205 (9%)
Query: 35 IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
+K +G G +GVV R + VAIK I E + + E ++ ++ H+ ++ L
Sbjct: 9 LKELGTGQFGVVKYGKWRGQYD-VAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 95 KDVMMPTHRISFKDVYLVYELMDTDLHQI---IKSSQSLSNDHCKYFVFQLLRGLKYLHS 151
V I Y+ + L ++ ++ Q L + CK + ++YL S
Sbjct: 65 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL--EMCK----DVCEAMEYLES 118
Query: 152 ANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNE--QFMTEYVVTRWYRAPELLLCCD 209
LHRDL N LVN +K+ DFGL+R +E + RW +P +L
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW--SPPEVLMYS 176
Query: 210 NYGTSIDVWSVGCIFAEI--LGRKP 232
+ + D+W+ G + EI LG+ P
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMP 201
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 26 FEIDTKYVPI-KPIGRGAYGVVCSSINRETNE---KVAIKKINNVFENRIDALRTLRELV 81
+EI + + + + IG G +G V I VAIK N + + + L+E +
Sbjct: 8 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEAL 66
Query: 82 LLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMD-TDLHQIIKSSQ-SLSNDHCKYFV 139
+R H +++ L V I+ V+++ EL +L ++ + SL +
Sbjct: 67 TMRQFDHPHIVKLIGV------ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 120
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE--YVVTR 197
+QL L YL S +HRD+ N+LV++N +K+ DFGL+R + + + +
Sbjct: 121 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 180
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIFPGTE 238
W APE + + ++ DVW G EIL G KP F G +
Sbjct: 181 WM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVK 220
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 26 FEIDTKYVPI-KPIGRGAYGVVCSSINRETNE---KVAIKKINNVFENRIDALRTLRELV 81
+EI + + + + IG G +G V I VAIK N + + + L+E +
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE-KFLQEAL 63
Query: 82 LLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMD-TDLHQIIKSSQ-SLSNDHCKYFV 139
+R H +++ L V I+ V+++ EL +L ++ + SL +
Sbjct: 64 TMRQFDHPHIVKLIGV------ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 117
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE--YVVTR 197
+QL L YL S +HRD+ N+LV++N +K+ DFGL+R + + + +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIFPGTE 238
W APE + + ++ DVW G EIL G KP F G +
Sbjct: 178 WM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVK 217
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 10/115 (8%)
Query: 130 LSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF 189
L+ +H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR + +
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 190 MTE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
+ + + +W APE + D Y DVWS G + EI LG P +PG +
Sbjct: 255 VRKGDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 305
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 95/223 (42%), Gaps = 21/223 (9%)
Query: 28 IDTK-YVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHI 86
ID K Y+ I+ +G G + V A+K+I + + D RE + R
Sbjct: 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRI--LCHEQQDREEAQREADMHRLF 83
Query: 87 KHDNVIALKDVMMPTHRISFKDVYLVYELMD-----TDLHQIIKSSQSLSNDHCKYFVFQ 141
H N++ L + R + + +L+ ++ ++ L+ D + +
Sbjct: 84 NHPNILRLVAYCL-RERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLG 142
Query: 142 LLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTS----RGNEQFMT--EYVV 195
+ RGL+ +H+ HRDLKP N+L+ + D G + G+ Q +T ++
Sbjct: 143 ICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAA 202
Query: 196 TRW---YRAPELLLCCDN--YGTSIDVWSVGCI-FAEILGRKP 232
R YRAPEL + DVWS+GC+ +A + G P
Sbjct: 203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 10/115 (8%)
Query: 130 LSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF 189
L+ +H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR + +
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 190 MTE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
+ + + +W APE + D Y DVWS G + EI LG P +PG +
Sbjct: 257 VRKGDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 307
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 6 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 64
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 118
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 175
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 176 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 26 FEIDTKYVPI-KPIGRGAYGVVCSSINRETNE---KVAIKKINNVFENRIDALRTLRELV 81
+EI + + + + IG G +G V I VAIK N + + + L+E +
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEAL 63
Query: 82 LLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMD-TDLHQIIKSSQ-SLSNDHCKYFV 139
+R H +++ L V I+ V+++ EL +L ++ + SL +
Sbjct: 64 TMRQFDHPHIVKLIGV------ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 117
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE--YVVTR 197
+QL L YL S +HRD+ N+LV++N +K+ DFGL+R + + + +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIFPGTE 238
W APE + + ++ DVW G EIL G KP F G +
Sbjct: 178 WM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVK 217
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 26 FEIDTKYVPI-KPIGRGAYGVVCSSINRETNE---KVAIKKINNVFENRIDALRTLRELV 81
+EI + + + + IG G +G V I VAIK N + + + L+E +
Sbjct: 10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEAL 68
Query: 82 LLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMD-TDLHQIIKSSQ-SLSNDHCKYFV 139
+R H +++ L V I+ V+++ EL +L ++ + SL +
Sbjct: 69 TMRQFDHPHIVKLIGV------ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 122
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE--YVVTR 197
+QL L YL S +HRD+ N+LV++N +K+ DFGL+R + + + +
Sbjct: 123 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 182
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIFPGTE 238
W APE + + ++ DVW G EIL G KP F G +
Sbjct: 183 WM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVK 222
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 20/223 (8%)
Query: 26 FEIDTKYVPI-KPIGRGAYGVVCSSINRETNE---KVAIKKINNVFENRIDALRTLRELV 81
+EI + + + + IG G +G V I VAIK N + + + L+E +
Sbjct: 2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVRE-KFLQEAL 60
Query: 82 LLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMD-TDLHQIIKSSQ-SLSNDHCKYFV 139
+R H +++ L V I+ V+++ EL +L ++ + SL +
Sbjct: 61 TMRQFDHPHIVKLIGV------ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA 114
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE--YVVTR 197
+QL L YL S +HRD+ N+LV++N +K+ DFGL+R + + + +
Sbjct: 115 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 174
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIFPGTE 238
W APE + + ++ DVW G EIL G KP F G +
Sbjct: 175 WM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVK 214
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 90/210 (42%), Gaps = 30/210 (14%)
Query: 35 IKPIGRGAYGVVC----SSINRETNEKVAIKKIN--------NVFENRIDALRTLRELVL 82
I+ +G G +G V N T E VA+K + + ++ ID LRTL
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLY---- 74
Query: 83 LRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
H+++I K S + LV E + + S+ F Q+
Sbjct: 75 -----HEHIIKYKGCCEDQGEKSLQ---LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQI 126
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEY---VVTRW 198
G+ YLHS + +HR+L N+L++ + +KI DFGLA+ G+E + W
Sbjct: 127 CEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 186
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAEIL 228
Y APE L Y S DVWS G E+L
Sbjct: 187 Y-APECLKEYKFYYAS-DVWSFGVTLYELL 214
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 10/115 (8%)
Query: 130 LSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF 189
L+ +H + FQ+ +G+++L S +HRDL N+L++ +KICDFGLAR + +
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 190 MTE---YVVTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPGTE 238
+ + + +W APE + D Y DVWS G + EI LG P +PG +
Sbjct: 248 VRKGDARLPLKWM-APETIF--DRVYTIQSDVWSFGVLLWEIFSLGASP-YPGVK 298
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 26/218 (11%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRTLRELVLLR 84
+T++ IK +G GA+G V + EKV AIK++ + + L E ++
Sbjct: 8 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMA 66
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDHCKYFVFQL 142
+ + +V L + + + V L+ +LM L + + ++ + + + Q+
Sbjct: 67 SVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 120
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY------VVT 196
+G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY V
Sbjct: 121 AKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYHAEGGKVPI 177
Query: 197 RWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
+W +L Y DVWS G E++ G KP
Sbjct: 178 KWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 213
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 11/119 (9%)
Query: 126 SSQSLSNDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRG 185
++ +LS+ +F + RG+ YL +HR+L N+LV N KI DFGL SRG
Sbjct: 132 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGL---SRG 188
Query: 186 NEQFMTEYVV---TRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKPIFPGTEC 239
E ++ + + RW L Y T+ DVWS G + EI LG P + G C
Sbjct: 189 QEVYVKKTMGRLPVRWMAIESLNYSV--YTTNSDVWSYGVLLWEIVSLGGTP-YCGMTC 244
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 21/231 (9%)
Query: 19 YTMWQTL-FEIDTKYVPI-KPIGRGAYGVVCSSINRETNE---KVAIKKINNVFENRIDA 73
YTM T +EI + + + + IG G +G V I VAIK N + +
Sbjct: 377 YTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE 436
Query: 74 LRTLRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMD-TDLHQIIKSSQ-SLS 131
+ L+E + +R H +++ L V I+ V+++ EL +L ++ + SL
Sbjct: 437 -KFLQEALTMRQFDHPHIVKLIGV------ITENPVWIIMELCTLGELRSFLQVRKFSLD 489
Query: 132 NDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMT 191
+ +QL L YL S +HRD+ N+LV+A +K+ DFGL+R + +
Sbjct: 490 LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKA 549
Query: 192 E--YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIFPGTE 238
+ +W APE + + ++ DVW G EIL G KP F G +
Sbjct: 550 SKGKLPIKWM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVK 597
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 27/209 (12%)
Query: 35 IKPIGRGAYGVV--C--SSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDN 90
I +G+G +G V C + T VA+K++ + ++ + RE+ +L+ + D
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ--REIQILKALHSDF 69
Query: 91 VIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVF--QLLRGLKY 148
++ + V R + LV E + + + D + ++ Q+ +G++Y
Sbjct: 70 IVKYRGVSYGPGRPELR---LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEY 126
Query: 149 LHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTR--------WYR 200
L S +HRDL N+LV + +KI DFGLA+ ++ + V R WY
Sbjct: 127 LGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK----DXXVVREPGQSPIFWY- 181
Query: 201 APELLLCCDN-YGTSIDVWSVGCIFAEIL 228
APE L DN + DVWS G + E+
Sbjct: 182 APESL--SDNIFSRQSDVWSFGVVLYELF 208
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 20/223 (8%)
Query: 26 FEIDTKYVPI-KPIGRGAYGVVCSSINRETNE---KVAIKKINNVFENRIDALRTLRELV 81
+EI + + + + IG G +G V I VAIK N + + + L+E +
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE-KFLQEAL 63
Query: 82 LLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMD-TDLHQIIKSSQ-SLSNDHCKYFV 139
+R H +++ L V I+ V+++ EL +L ++ + SL +
Sbjct: 64 TMRQFDHPHIVKLIGV------ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 117
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE--YVVTR 197
+QL L YL S +HRD+ N+LV+A +K+ DFGL+R + + + +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIFPGTE 238
W APE + + ++ DVW G EIL G KP F G +
Sbjct: 178 WM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVK 217
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 26/218 (11%)
Query: 29 DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRTLRELVLLR 84
+T++ IK +G GA+G V + EKV AIK++ + + L E ++
Sbjct: 11 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMA 69
Query: 85 HIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDHCKYFVFQL 142
+ + +V L + + + V L+ +LM L + + ++ + + + Q+
Sbjct: 70 SVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI 123
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY------VVT 196
G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY V
Sbjct: 124 AEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYHAEGGKVPI 180
Query: 197 RWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
+W +L Y DVWS G E++ G KP
Sbjct: 181 KWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 216
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 90/210 (42%), Gaps = 30/210 (14%)
Query: 35 IKPIGRGAYGVVC----SSINRETNEKVAIKKIN--------NVFENRIDALRTLRELVL 82
I+ +G G +G V N T E VA+K + + ++ ID LRTL
Sbjct: 19 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLY---- 74
Query: 83 LRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCKYFVFQL 142
H+++I K S + LV E + + S+ F Q+
Sbjct: 75 -----HEHIIKYKGCCEDQGEKSLQ---LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQI 126
Query: 143 LRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQFMTEY---VVTRW 198
G+ YLH+ + +HR+L N+L++ + +KI DFGLA+ G+E + W
Sbjct: 127 CEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW 186
Query: 199 YRAPELLLCCDNYGTSIDVWSVGCIFAEIL 228
Y APE L Y S DVWS G E+L
Sbjct: 187 Y-APECLKEYKFYYAS-DVWSFGVTLYELL 214
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 21/205 (10%)
Query: 38 IGRGAYGVVCSS-INRETNEKVAIKKINNVFENRIDALRTL--RELVLLRHIKHDNVIAL 94
+G G +GVV +N N VA+KK+ + + + L+ +E+ ++ +H+N++ L
Sbjct: 39 MGEGGFGVVYKGYVN---NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 95 KDVMMPTHRISFKDVYLVYELMDT----DLHQIIKSSQSLS-NDHCKYFVFQLLRGLKYL 149
D+ LVY M D + + LS + CK G+ +L
Sbjct: 96 LGFSSDG-----DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK-IAQGAANGINFL 149
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ--FMTEYVVTRWYRAPELLLC 207
H + +HRD+K N+L++ KI DFGLAR S Q + V T Y APE L
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALR- 208
Query: 208 CDNYGTSIDVWSVGCIFAEILGRKP 232
D++S G + EI+ P
Sbjct: 209 -GEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 145/368 (39%), Gaps = 83/368 (22%)
Query: 28 IDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHI- 86
+ +Y I+ +G G + V + + VA+K + + AL ++ L +R
Sbjct: 29 FNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESD 88
Query: 87 ----KHDNVIALKDVMMPTHRISFKD---VYLVYELMDTDLHQ-IIKSS-QSLSNDHCKY 137
D V+ L D +IS + V +V+E++ L + IIKS+ Q L K
Sbjct: 89 PSDPNKDMVVQLID----DFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKS 144
Query: 138 FVFQLLRGLKYLHS-ANILHRDLKPGN--------------------------------- 163
+ Q+L+GL YLHS I+H D+KP N
Sbjct: 145 IIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAV 204
Query: 164 -------LLVNA----NCD---LKICDFGLARTSRGNEQFMTEYVVTRWYRAPELLLCCD 209
LLVN N D +KI D G A + TE + TR YR+ E+L+
Sbjct: 205 STAPAADLLVNPLDPRNADKIRVKIADLGNACWVH---KHFTEDIQTRQYRSIEVLIGA- 260
Query: 210 NYGTSIDVWSVGCIFAEILGRKPIFPG------TECLNQLKLIISVFGT-------QQEA 256
Y T D+WS C+ E+ +F + + + II + G+ +
Sbjct: 261 GYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKY 320
Query: 257 DLEFIDNPKARRFIKSL-PYSRGTHISSLY--PQADPLAL-DLLQKMLVFEPSKRITVTE 312
EF + R I L P+S + Y P D D L ML P KR + E
Sbjct: 321 SREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGE 380
Query: 313 ALQHPYIS 320
L+HP+++
Sbjct: 381 CLRHPWLN 388
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 20/223 (8%)
Query: 26 FEIDTKYVPI-KPIGRGAYGVVCSSINRETNE---KVAIKKINNVFENRIDALRTLRELV 81
+EI + + + + IG G +G V I VAIK N + + + L+E +
Sbjct: 5 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVRE-KFLQEAL 63
Query: 82 LLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMD-TDLHQIIKSSQ-SLSNDHCKYFV 139
+R H +++ L V I+ V+++ EL +L ++ + SL +
Sbjct: 64 TMRQFDHPHIVKLIGV------ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYA 117
Query: 140 FQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTE--YVVTR 197
+QL L YL S +HRD+ N+LV++N +K+ DFGL+R + + +
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK 177
Query: 198 WYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKPIFPGTE 238
W APE + + ++ DVW G EIL G KP F G +
Sbjct: 178 WM-APE-SINFRRFTSASDVWMFGVCMWEILMHGVKP-FQGVK 217
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 35 IKPIGRGAYGVVCSS--INRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVI 92
++ IG G +G+V +N++ KVAIK I E + + E ++ + H ++
Sbjct: 13 VQEIGSGQFGLVHLGYWLNKD---KVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLV 66
Query: 93 ALKDVMMPTHRISFKDVYLVYELMDTD-LHQIIKSSQSL-SNDHCKYFVFQLLRGLKYLH 150
L V + I LV E M+ L +++ + L + + + G+ YL
Sbjct: 67 QLYGVCLEQAPIC-----LVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 121
Query: 151 SANILHRDLKPGNLLVNANCDLKICDFGLAR-------TSRGNEQFMTEYVVTRWYRAPE 203
A ++HRDL N LV N +K+ DFG+ R TS +F ++ +PE
Sbjct: 122 EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA------SPE 175
Query: 204 LLLCCDNYGTSIDVWSVGCIFAEILGRKPI 233
+ Y + DVWS G + E+ I
Sbjct: 176 -VFSFSRYSSKSDVWSFGVLMWEVFSEGKI 204
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 10 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 68
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 69 LDEAYVMASVDNPHVCRLLGICLTS------TVQLIMQLMPFGCLLDYVREHKDNIGSQY 122
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFG A+ E+ EY
Sbjct: 123 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK---EYH 179
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 180 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 223
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 8 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 66
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLTS------TVQLIMQLMPFGCLLDYVREHKDNIGSQY 120
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFG A+ E+ EY
Sbjct: 121 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK---EYH 177
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 178 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AI ++ + +
Sbjct: 40 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANK-EI 98
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 99 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 152
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 153 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 209
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 210 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 8 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 66
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLTS------TVQLIMQLMPFGCLLDYVREHKDNIGSQY 120
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFG A+ E+ EY
Sbjct: 121 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK---EYH 177
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 178 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Query: 38 IGRGAYGVVCSS-INRETNEKVAIKKINNVFENRIDALRTL--RELVLLRHIKHDNVIAL 94
+G G +GVV +N N VA+KK+ + + + L+ +E+ ++ +H+N++ L
Sbjct: 33 MGEGGFGVVYKGYVN---NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 89
Query: 95 KDVMMPTHRISFKDVYLVYELMDT----DLHQIIKSSQSLS-NDHCKYFVFQLLRGLKYL 149
D+ LVY M D + + LS + CK G+ +L
Sbjct: 90 LGFSSDG-----DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK-IAQGAANGINFL 143
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ--FMTEYVVTRWYRAPELLLC 207
H + +HRD+K N+L++ KI DFGLAR S Q V T Y APE L
Sbjct: 144 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALR- 202
Query: 208 CDNYGTSIDVWSVGCIFAEILGRKP 232
D++S G + EI+ P
Sbjct: 203 -GEITPKSDIYSFGVVLLEIITGLP 226
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 6 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 64
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 118
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFG A+ E+ EY
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK---EYH 175
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 176 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK + GA+G V + EKV AIK++ + +
Sbjct: 13 QALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 71
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 72 LDEAYVMASVDNPHVCRLLGICLTS------TVQLIMQLMPFGCLLDYVREHKDNIGSQY 125
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 126 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 182
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 183 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Query: 38 IGRGAYGVVCSS-INRETNEKVAIKKINNVFENRIDALRTL--RELVLLRHIKHDNVIAL 94
+G G +GVV +N N VA+KK+ + + + L+ +E+ ++ +H+N++ L
Sbjct: 39 MGEGGFGVVYKGYVN---NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVEL 95
Query: 95 KDVMMPTHRISFKDVYLVYELMDT----DLHQIIKSSQSLS-NDHCKYFVFQLLRGLKYL 149
D+ LVY M D + + LS + CK G+ +L
Sbjct: 96 LGFSSDG-----DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCK-IAQGAANGINFL 149
Query: 150 HSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQ--FMTEYVVTRWYRAPELLLC 207
H + +HRD+K N+L++ KI DFGLAR S Q V T Y APE L
Sbjct: 150 HENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALR- 208
Query: 208 CDNYGTSIDVWSVGCIFAEILGRKP 232
D++S G + EI+ P
Sbjct: 209 -GEITPKSDIYSFGVVLLEIITGLP 232
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 8 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 66
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 67 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 120
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFG A+ E+ EY
Sbjct: 121 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK---EYH 177
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 178 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 221
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 101/238 (42%), Gaps = 38/238 (15%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDV 97
+G G G V R+T +A+K++ N+ + R L +L DV
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRS-GNKEENKRILMDL---------------DV 76
Query: 98 MMPTHR-----------ISFKDVYLVYELMDTDLHQIIKSSQS-LSNDHCKYFVFQLLRG 145
++ +H I+ DV++ ELM T ++ K Q + +++
Sbjct: 77 VLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKA 136
Query: 146 LKYLHSA-NILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTRWYRAPEL 204
L YL ++HRD+KP N+L++ +K+CDFG++ +++ Y APE
Sbjct: 137 LYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGIS-GRLVDDKAKDRSAGCAAYMAPER 195
Query: 205 LLCCD----NYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIISVFGTQQEADL 258
+ D +Y DVWS+G E+ + FP C +++ V Q+E L
Sbjct: 196 IDPPDPTKPDYDIRADVWSLGISLVELATGQ--FPYKNCKTDFEVLTKVL--QEEPPL 249
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK +G GA+G V + EKV AIK++ + +
Sbjct: 13 QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 71
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 72 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 125
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFG A+ E+ EY
Sbjct: 126 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEK---EYH 182
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 183 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK + GA+G V + EKV AIK++ + +
Sbjct: 6 QALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 64
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 65 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 118
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 119 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 175
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 176 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 219
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVVTR 197
F +Q+ +G++YL ++HRDL N+LV +KI DFGL+R + YV
Sbjct: 155 FAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDS----YVKRS 210
Query: 198 WYRAPELLLCCDN-----YGTSIDVWSVGCIFAEI--LGRKPIFPG 236
R P + ++ Y T DVWS G + EI LG P +PG
Sbjct: 211 QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP-YPG 255
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 28/226 (12%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKV----AIKKINNVFENRIDALRT 76
Q L I +T++ IK + GA+G V + EKV AIK++ + +
Sbjct: 13 QALLRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EI 71
Query: 77 LRELVLLRHIKHDNVIALKDVMMPTHRISFKDVYLVYELMDTD--LHQIIKSSQSLSNDH 134
L E ++ + + +V L + + + V L+ +LM L + + ++ + +
Sbjct: 72 LDEAYVMASVDNPHVCRLLGICLTS------TVQLITQLMPFGCLLDYVREHKDNIGSQY 125
Query: 135 CKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY- 193
+ Q+ +G+ YL ++HRDL N+LV +KI DFGLA+ E+ EY
Sbjct: 126 LLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK---EYH 182
Query: 194 -----VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
V +W +L Y DVWS G E++ G KP
Sbjct: 183 AEGGKVPIKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKP 226
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 33/215 (15%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHI--KHDNVIALK 95
+G+G YG V E VA+K +F +R D RE L + +H+N++
Sbjct: 16 VGKGRYGEVWRG--SWQGENVAVK----IFSSR-DEKSWFRETELYNTVMLRHENILGFI 68
Query: 96 DVMMPTHRISFKDVYLV--YELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH--- 150
M T R S ++L+ Y M + L+ ++ + +L C V + GL +LH
Sbjct: 69 ASDM-TSRHSSTQLWLITHYHEMGS-LYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 151 -----SANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQF---MTEYVVTRWYRA 201
I HRDLK N+LV N I D GLA S+ Q V T+ Y A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 202 PELL------LCCDNYGTSIDVWSVGCIFAEILGR 230
PE+L C D+Y +D+W+ G + E+ R
Sbjct: 186 PEVLDETIQVDCFDSY-KRVDIWAFGLVLWEVARR 219
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 33/215 (15%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHI--KHDNVIALK 95
+G+G YG V E VA+K +F +R D RE L + +H+N++
Sbjct: 16 VGKGRYGEVWRG--SWQGENVAVK----IFSSR-DEKSWFRETELYNTVMLRHENILGFI 68
Query: 96 DVMMPTHRISFKDVYLV--YELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH--- 150
M T R S ++L+ Y M + L+ ++ + +L C V + GL +LH
Sbjct: 69 ASDM-TSRHSSTQLWLITHYHEMGS-LYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 151 -----SANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQF---MTEYVVTRWYRA 201
I HRDLK N+LV N I D GLA S+ Q V T+ Y A
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 202 PELL------LCCDNYGTSIDVWSVGCIFAEILGR 230
PE+L C D+Y +D+W+ G + E+ R
Sbjct: 186 PEVLDETIQVDCFDSY-KRVDIWAFGLVLWEVARR 219
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 33/215 (15%)
Query: 38 IGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHI--KHDNVIALK 95
+G+G YG V E VA+K +F +R D RE L + +H+N++
Sbjct: 45 VGKGRYGEVWR--GSWQGENVAVK----IFSSR-DEKSWFRETELYNTVMLRHENILGFI 97
Query: 96 DVMMPTHRISFKDVYLV--YELMDTDLHQIIKSSQSLSNDHCKYFVFQLLRGLKYLH--- 150
M T R S ++L+ Y M + L+ ++ + +L C V + GL +LH
Sbjct: 98 ASDM-TSRHSSTQLWLITHYHEMGS-LYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 151 -----SANILHRDLKPGNLLVNANCDLKICDFGLART-SRGNEQF---MTEYVVTRWYRA 201
I HRDLK N+LV N I D GLA S+ Q V T+ Y A
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 202 PELL------LCCDNYGTSIDVWSVGCIFAEILGR 230
PE+L C D+Y +D+W+ G + E+ R
Sbjct: 215 PEVLDETIQVDCFDSY-KRVDIWAFGLVLWEVARR 248
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 20/209 (9%)
Query: 38 IGRGAYGVVCSSINRETNE---KVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIAL 94
+G+G +G V + ++ + KVA+K + D LRE ++ H +V L
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 95 KDVMMPTH---RISFKDVYLVYELMDTDLHQIIKSSQSLSN------DHCKYFVFQLLRG 145
V + + R+ V L + + DLH + +S+ N F+ + G
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPF-MKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149
Query: 146 LKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNE---QFMTEYVVTRWYRAP 202
++YL S N +HRDL N ++ + + + DFGL+R + Q + +W
Sbjct: 150 MEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALE 209
Query: 203 ELLLCCDN-YGTSIDVWSVGCIFAEILGR 230
L DN Y DVW+ G EI+ R
Sbjct: 210 SL---ADNLYTVHSDVWAFGVTMWEIMTR 235
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 36/232 (15%)
Query: 36 KPIGRGAYGVVCSSI-----NRETNEKVAIKKI-NNVFENRIDALRTLRELVLLRHI-KH 88
K +G GA+G V + + KVA+K + + + +AL + EL ++ H+ +H
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL--MSELKIMSHLGQH 94
Query: 89 DNVIAL-------KDVMMPTHRISFKDVY-LVYELMDTDLHQIIKSSQ---SLSNDHCK- 136
+N++ L V++ T + D+ + + L + Q L + +
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 137 -------YFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQF 189
+F Q+ +G+ +L S N +HRD+ N+L+ KI DFGLAR + +
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 214
Query: 190 MTE---YVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEI--LGRKPIFPG 236
+ + + +W APE + C Y DVWS G + EI LG P +PG
Sbjct: 215 IVKGNARLPVKWM-APESIFDC-VYTVQSDVWSYGILLWEIFSLGLNP-YPG 263
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 28/218 (12%)
Query: 26 FEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRI-------DALRTLR 78
FE + + P+ +G+G +G V + +VAIK I NR+ D++
Sbjct: 29 FEAEYRLGPL--LGKGGFGTVFAGHRLTDRLQVAIKVIPR---NRVLGWSPLSDSVTCPL 83
Query: 79 ELVLLRHIK----HDNVIALKDVMMPTHRISFKDVYLVYE--LMDTDLHQIIKSSQSLSN 132
E+ LL + H VI L D + + LV E L DL I L
Sbjct: 84 EVALLWKVGAGGGHPGVIRLLDWFE-----TQEGFMLVLERPLPAQDLFDYITEKGPLGE 138
Query: 133 DHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVN--ANCDLKICDFGLARTSRGNEQFM 190
+ F Q++ +++ HS ++HRD+K N+L++ C K+ DFG +++
Sbjct: 139 GPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGC-AKLIDFGSGALL--HDEPY 195
Query: 191 TEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL 228
T++ TR Y PE + + VWS+G + +++
Sbjct: 196 TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMV 233
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 95/229 (41%), Gaps = 34/229 (14%)
Query: 23 QTLFEI--DTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLREL 80
Q L I +T+ +K +G GA+G V I E V I A++ LRE
Sbjct: 8 QALLRILKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPV----------AIKVLREN 57
Query: 81 VLLRHIKH--DNVIALKDVMMP-THRIS----FKDVYLVYELMDTD--LHQIIKSSQSLS 131
+ K D + V P R+ V LV +LM L + ++ L
Sbjct: 58 TSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLG 117
Query: 132 NDHCKYFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMT 191
+ + Q+ +G+ YL ++HRDL N+LV + +KI DFGLAR +E T
Sbjct: 118 SQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE---T 174
Query: 192 EY------VVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEIL--GRKP 232
EY V +W +L + DVWS G E++ G KP
Sbjct: 175 EYHADGGKVPIKWMALESILR--RRFTHQSDVWSYGVTVWELMTFGAKP 221
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 10/105 (9%)
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY---V 194
F +Q+ +G++YL +++HRDL N+LV +KI DFGL+R + + +
Sbjct: 155 FAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI 214
Query: 195 VTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPG 236
+W L D+ Y T DVWS G + EI LG P +PG
Sbjct: 215 PVKWMAIESLF---DHIYTTQSDVWSFGVLLWEIVTLGGNP-YPG 255
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 36/227 (15%)
Query: 36 KPIGRGAYG-VVCSSINRE--TNEKVAIK--KINNVFENRIDALRTLRELVLLRHIKHDN 90
K +G G +G V+ ++ +E T+ KVA+K K++N + I+ L E ++ H N
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEF--LSEAACMKDFSHPN 97
Query: 91 VIALKDV--------------MMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLSNDHCK 136
VI L V ++P + YL+Y ++T I Q+L
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHI--PLQTLLK---- 151
Query: 137 YFVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEYVV- 195
F+ + G++YL + N LHRDL N ++ + + + DFGL++ + + +
Sbjct: 152 -FMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAK 210
Query: 196 --TRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEILGRKPI-FPGTE 238
+W L D Y + DVW+ G EI R +PG +
Sbjct: 211 MPVKWIAIESL---ADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ 254
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 13/200 (6%)
Query: 39 GRGAYGVVCSS-INRETNEKVAIKKINNVFENRIDALRTL--RELVLLRHIKHDNVIALK 95
G G +GVV +N N VA+KK+ + + + L+ +E+ + +H+N++ L
Sbjct: 31 GEGGFGVVYKGYVN---NTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELL 87
Query: 96 DVMMPTHRISFKDVYLVYELMDTDLHQIIKSSQSLS-NDHCKYFVFQLLRGLKYLHSANI 154
+ VY + D + + LS + CK G+ +LH +
Sbjct: 88 GFSSDGDDLCLVYVYXPNGSL-LDRLSCLDGTPPLSWHXRCK-IAQGAANGINFLHENHH 145
Query: 155 LHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFM--TEYVVTRWYRAPELLLCCDNYG 212
+HRD+K N+L++ KI DFGLAR S Q + + V T Y APE L
Sbjct: 146 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALR--GEIT 203
Query: 213 TSIDVWSVGCIFAEILGRKP 232
D++S G + EI+ P
Sbjct: 204 PKSDIYSFGVVLLEIITGLP 223
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 138 FVFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSRGNEQFMTEY---V 194
F +Q+ +G++YL ++HRDL N+LV +KI DFGL+R + + +
Sbjct: 155 FAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI 214
Query: 195 VTRWYRAPELLLCCDN-YGTSIDVWSVGCIFAEI--LGRKPIFPG 236
+W L D+ Y T DVWS G + EI LG P +PG
Sbjct: 215 PVKWMAIESLF---DHIYTTQSDVWSFGVLLWEIVTLGGNP-YPG 255
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,071,486
Number of Sequences: 62578
Number of extensions: 445514
Number of successful extensions: 4115
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 948
Number of HSP's gapped (non-prelim): 1358
length of query: 364
length of database: 14,973,337
effective HSP length: 100
effective length of query: 264
effective length of database: 8,715,537
effective search space: 2300901768
effective search space used: 2300901768
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)