BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017916
(364 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 331 bits (848), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 172/347 (49%), Positives = 231/347 (66%), Gaps = 4/347 (1%)
Query: 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
N++A L N L+++ +P +VL++M VGICGSDVHY + R ADF+VK+PMVI
Sbjct: 5 NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64
Query: 78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
GHE +G + KVG VK L GDRVA+EPG+ C RC CK G+YNLCP++ F ATPP G+
Sbjct: 65 GHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGN 124
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
LA VH AD C KLPDNVSLEEGA+ EPLSVG+HACRRA + T VL++GAGPIGLV+
Sbjct: 125 LARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVS 184
Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
+L A+A+GA +V RL VAK GAD + V ++ + +E+I+ A+G +V
Sbjct: 185 VLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNV 243
Query: 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL 317
+ DC+G K ++ ++ TR GG + LVGMG +TVPL A RE+D+ VFRY N +P+
Sbjct: 244 TIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPI 303
Query: 318 CLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETS-ARGGTAIKVMFN 363
LE++ SG+ +VK LVTH F Q +AFE + + IKVM +
Sbjct: 304 ALEMVASGRCNVKQLVTHSFKLEQ--TVDAFEAARKKADNTIKVMIS 348
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 328 bits (840), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/347 (48%), Positives = 235/347 (67%), Gaps = 7/347 (2%)
Query: 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
N++ + G L+++ + +P GP +VL+RM +VGICGSDVHY + R +F+VK+PMV+
Sbjct: 8 NLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67
Query: 78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
GHE +G +EKVGS VK L PGDRVA+EPG + CK GRYNL P + F ATPP G+
Sbjct: 68 GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGN 127
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
L H A C+KLPDNV+ EEGA+ EPLSVG+HACRR + VL+ GAGPIG+VT
Sbjct: 128 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVT 187
Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 256
+L A+A GA ++V+ D+ RLS AKE+GAD ++++S + Q+IA +VE +G +
Sbjct: 188 LLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE---GQLGCKPE 244
Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
V+ +C G ++ + ATR+GG + LVG+G TVPL AA+REVD+ GVFRY NTWP
Sbjct: 245 VTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWP 304
Query: 317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363
+ + +L S ++VKPLVTHRF ++ EAFET + G +K+M
Sbjct: 305 VAISMLASKSVNVKPLVTHRFPL--EKALEAFETFKK-GLGLKIMLK 348
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 327 bits (839), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 169/346 (48%), Positives = 237/346 (68%), Gaps = 7/346 (2%)
Query: 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
N++ + G L+++ + +P GP +VL++M +VGICGSDVHY + R DFVVK+PMV+
Sbjct: 7 NLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVL 66
Query: 78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
GHE +G + KVGS V+ L PGDRVA++PG + CK GRYNL P + F ATPP G+
Sbjct: 67 GHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGN 126
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
L H A+ C+KLPDNV+ EEGA+ EPLSVG+HACRRA + VL+ GAGPIGLV
Sbjct: 127 LCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVN 186
Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 256
+L A+A GA ++V+ D+ RLS AKE+GAD I+++S + ++IA++VE + +G+ +
Sbjct: 187 LLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGL---LGSKPE 243
Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
V+ +C G ++ + AT +GG + LVG+G +VPL AA REVD+ GVFRY NTWP
Sbjct: 244 VTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCNTWP 303
Query: 317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362
+ + +L S ++VKPLVTHRF ++ EAFETS + G +KVM
Sbjct: 304 MAISMLASKSVNVKPLVTHRFPL--EKALEAFETSKK-GLGLKVMI 346
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 320 bits (821), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 166/338 (49%), Positives = 227/338 (67%), Gaps = 6/338 (1%)
Query: 18 NMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVI 77
N++ + G L+++ + +P GP +VL+R +VGICGSDVHY + R +F+VK+P V+
Sbjct: 8 NLSLVVHGPGDLRLENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPXVL 67
Query: 78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGS 137
GHE +G +EKVGS VK L PGDRVA+EPG + CK GRYNL P + F ATPP G+
Sbjct: 68 GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATPPDDGN 127
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
L H A C+KLPDNV+ EEGA+ EPLSVG+HACRR + VL+ GAGPIG VT
Sbjct: 128 LCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGXVT 187
Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST-NLQDIAEEVEKIQKAMGTGID 256
+L A+A GA ++V+ D+ RLS AKE+GAD ++++S + Q+IA +VE +G +
Sbjct: 188 LLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVE---GQLGCKPE 244
Query: 257 VSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWP 316
V+ +C G ++ + ATR+GG + LVG+G TVPL AA+REVD+ GVFRY NTWP
Sbjct: 245 VTIECTGAEASIQAGIYATRSGGTLVLVGLGSEXTTVPLLHAAIREVDIKGVFRYCNTWP 304
Query: 317 LCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
+ + L S ++VKPLVTHRF ++ EAFET +G
Sbjct: 305 VAISXLASKSVNVKPLVTHRFPL--EKALEAFETFKKG 340
>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase
pdb|3M6I|B Chain B, L-Arabinitol 4-Dehydrogenase
Length = 363
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/324 (42%), Positives = 197/324 (60%), Gaps = 8/324 (2%)
Query: 43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
+V V +++ GICGSDVH+ K +V+ V+GHE AG + V VK++ GDRVA
Sbjct: 42 EVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVA 101
Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA 162
+EP + C C+ C GRYN C + F +TPPV G L V HPA C K+ N+S E GA
Sbjct: 102 IEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKI-GNMSYENGA 160
Query: 163 MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVA 222
M EPLSV L +RA + VLI GAGPIGL+TML A+A GA +VI D+D+ RL A
Sbjct: 161 MLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFA 220
Query: 223 KELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID--VSFDCAGFNKTMSTALSATRAGGK 280
KE+ + + L E +KI ++ G GI+ V+ +C G +++ A+ A + GGK
Sbjct: 221 KEICPEVVTHKVERL-SAEESAKKIVESFG-GIEPAVALECTGVESSIAAAIWAVKFGGK 278
Query: 281 VCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFS 340
V ++G+G +E+ +P A+VREVD+ +RY NTWP + L+ +G +D+ LVTHRF
Sbjct: 279 VFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAIRLVENGLVDLTRLVTHRFPL- 337
Query: 341 QKEVEEAFETSARGGT-AIKVMFN 363
++ +AFET++ T AIKV
Sbjct: 338 -EDALKAFETASDPKTGAIKVQIQ 360
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 180/334 (53%), Gaps = 13/334 (3%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
++P GP +VL+++ A ICG+D+H + A +K P + GHE AG + ++G V+
Sbjct: 22 DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEG 81
Query: 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
+ GD V++E I C +C C+ G+Y++C K F G A V PA +K P
Sbjct: 82 IEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPK 140
Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
++ E + EPL + I ++ VLI GAGP+GL+ + A+A GA +++ +
Sbjct: 141 SIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAVAKASGAYPVIVSEP 199
Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 274
D+R +AK++GAD + ++ +D+ +EV I G G+DV + +G K + L A
Sbjct: 200 SDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPKALEQGLQA 255
Query: 275 TRAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLRSGKIDVKP 331
G+V L+G+ ++T+ + + + + G+ TW LL+SGK+++ P
Sbjct: 256 VTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDP 315
Query: 332 LVTHRF-GFSQKEVEEAFETSARGGTAIKVMFNL 364
++TH++ GF + EEAFE R G KV+F L
Sbjct: 316 IITHKYKGFDK--YEEAFEL-XRAGKTGKVVFXL 346
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 180/334 (53%), Gaps = 13/334 (3%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
++P GP +VL+++ A ICG+D+H + A +K P + GHE AG + ++G V+
Sbjct: 23 DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEG 82
Query: 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
+ GD V++E I C +C C+ G+Y++C K F G A V PA +K P
Sbjct: 83 IEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPK 141
Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
++ E + EPL + I ++ VLI GAGP+GL+ + A+A GA +++ +
Sbjct: 142 SIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLGLLGIAVAKASGAYPVIVSEP 200
Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 274
D+R +AK++GAD + ++ +D+ +EV I G G+DV + +G K + L A
Sbjct: 201 SDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPKALEQGLQA 256
Query: 275 TRAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLRSGKIDVKP 331
G+V L+G+ ++T+ + + + + G+ TW LL+SGK+++ P
Sbjct: 257 VTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDP 316
Query: 332 LVTHRF-GFSQKEVEEAFETSARGGTAIKVMFNL 364
++TH++ GF + EEAFE R G KV+F L
Sbjct: 317 IITHKYKGFDK--YEEAFEL-XRAGKTGKVVFXL 347
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 178/332 (53%), Gaps = 12/332 (3%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
++P GP +VL+++ A ICG+D+H + A +K P ++GHE AG + +VG V+
Sbjct: 23 DVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVED 82
Query: 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
L GD +++E I C +C CK RY++C K F + G A+ + PA +K P
Sbjct: 83 LQVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFGV-DMDGVFAHYAIVPAKNAWKNPK 141
Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
++ E A+ EPL + I + LI GAGP+GL+ + A+A GA +++ +
Sbjct: 142 DMPPEYAALQEPLGNAVDTVLAGPIAGRST-LITGAGPLGLLGIAVAKASGAYPVIVSEP 200
Query: 215 DDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSA 274
++R +AK++GAD + V+ +D + V I G G++V + +G K + L A
Sbjct: 201 SEFRRKLAKKVGADYV--VNPFEEDPVKFVMDITD--GAGVEVFLEFSGAPKALEQGLKA 256
Query: 275 TRAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLRSGKIDVKP 331
GG+V L+G+ E+T+ + + ++V G+ TW L++SGK+++ P
Sbjct: 257 VTPGGRVSLLGLFPREVTIDFNNLIIFKALEVHGITGRHLWETWYTVSSLIQSGKLNLDP 316
Query: 332 LVTHRF-GFSQKEVEEAFETSARGGTAIKVMF 362
++TH++ GF + EEAFE G T V F
Sbjct: 317 IITHKYKGFDK--FEEAFELMRAGKTGKVVFF 346
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 164/326 (50%), Gaps = 13/326 (3%)
Query: 20 AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
A L V + ++ +P GP D+LV+++A GICG+D H L +F P+ +GH
Sbjct: 26 AVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLH----GEFPSTPPVTLGH 81
Query: 80 ECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GS 137
E G++ + GS V+ + PG R+ +P ISC RC C+ GR NLC ++ +H G
Sbjct: 82 EFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIG---IHRDGG 138
Query: 138 LANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVT 197
A V+ P F++P + GA CEPL+ LH + I + V I+G G IGL+T
Sbjct: 139 FAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILGGGVIGLLT 198
Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
+ AR GA +++ + +A+E+GA V S D+ E + + G+DV
Sbjct: 199 VQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAG--DVVEAIAGPVGLVPGGVDV 256
Query: 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAV--REVDVVGVFRYKNTW 315
+CAG +T+ + +AGG V ++G+ V + P + RE+ V+G F
Sbjct: 257 VIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFVH 316
Query: 316 PLCLELLRSGKIDVKPLVTHRFGFSQ 341
+L+ +G I++ ++ R +
Sbjct: 317 RRAADLVATGAIEIDRXISRRISLDE 342
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 171/331 (51%), Gaps = 13/331 (3%)
Query: 36 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTL 95
+P GP ++LVR++A ICG+D+H K A ++ P+V GHE +GV+E VG V+
Sbjct: 20 VPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRP 79
Query: 96 VPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 155
GD V+LE I C C C+ G Y++C + G A VV PA+ + P +
Sbjct: 80 QVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAENAWVNPKD 138
Query: 156 VSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVD 215
+ E A+ EP +H + +VLI GAGPIGL+ + RA GA I++ D +
Sbjct: 139 LPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPN 198
Query: 216 DYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSAT 275
YRL+ A+ AD +V L++ + +E +++ G+G++V + +G + L A
Sbjct: 199 PYRLAFARPY-ADRLVN---PLEE--DLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMAL 252
Query: 276 RAGGKVCLVGMGHHEMTVPLTPAAV-REVDVVGVF--RYKNTWPLCLELLRSGKIDVKPL 332
GG+ ++G+ + L V R + G+ R TW L+ SG++D+ PL
Sbjct: 253 IPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVDLSPL 312
Query: 333 VTHRFGFSQKEVEEAFETSARGGTAIKVMFN 363
+THR S+ EAF A G A+KV+ +
Sbjct: 313 LTHRLPLSR--YREAFGLLA-SGQAVKVILD 340
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 159/343 (46%), Gaps = 48/343 (13%)
Query: 43 DVLVRMKAVGICGSDV--------HYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
+V V++ + G+CGSD+ HY P+ +GHE +G I+ VGS V
Sbjct: 27 EVRVKIASSGLCGSDLPRIFKNGAHYY------------PITLGHEFSGYIDAVGSGVDD 74
Query: 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPD 154
L PGD VA P + C+ C C G Y+ C + F + G A +V F LP
Sbjct: 75 LHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRR-DGGFAEYIVVKRKNVFALPT 133
Query: 155 NVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDV 214
++ +E+GA EP++VGLHA A NV+I+GAG IGL+ + A A GA + +D+
Sbjct: 134 DMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDI 193
Query: 215 DDYRLSVAKELGADNIVKVST----NLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMST 270
+L++AK GA S +Q + E+ Q + T AG +T+
Sbjct: 194 SSEKLALAKSFGAMQTFNSSEMSAPQMQSVLRELRFNQLILET--------AGVPQTVEL 245
Query: 271 ALSATRAGGKVCLVGMGHHEMTVPLTPAAV-----REVDVVGVF-RYKNTWP-----LCL 319
A+ ++ LVG H ++ LT A +E+ V+G + Y + WP
Sbjct: 246 AVEIAGPHAQLALVGTLHQDLH--LTSATFGKILRKELTVIGSWMNYSSPWPGQEWETAS 303
Query: 320 ELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMF 362
LL K+ ++PL+ HR F + +A AR KV+
Sbjct: 304 RLLTERKLSLEPLIAHRGSF--ESFAQAVRDIARNAMPGKVLL 344
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 166/347 (47%), Gaps = 34/347 (9%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
LKI+ E P++ +VLVR+KA G+C +D+H D+ VK P++ GHE G++E
Sbjct: 13 LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68
Query: 87 KVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
+VG V L GDRV + P + +C CD+C G+ LC K A V G A
Sbjct: 69 EVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQK-NAGYSVDGGYAEYCRA 126
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
AD K+PDN+S EE A C ++ A + P V I G G +G V + A+
Sbjct: 127 AADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGLGHVAVQYAK 185
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
A G +V VD+ D +L +AKELGAD +V + E+ K K G+ + A
Sbjct: 186 AMGL-NVVAVDIGDEKLELAKELGADLVV------NPLKEDAAKFMKEKVGGVHAAVVTA 238
Query: 263 GFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKNTWPLCLEL 321
+A ++ R GG LVG+ EM +P+ + + ++G + + L+
Sbjct: 239 VSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQF 298
Query: 322 LRSGK----IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364
GK I+V+PL +++ E F+ +G +V+ L
Sbjct: 299 AAEGKVKTIIEVQPL---------EKINEVFDRMLKGQINGRVVLTL 336
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 34/347 (9%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
LKI+ E P++ +VLVR+KA G+C +D+H D+ VK P++ GHE G++E
Sbjct: 13 LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68
Query: 87 KVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
+VG V L GDRV + P + +C CD+C G+ LC K A V G A
Sbjct: 69 EVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQK-NAGYSVDGGYAEYCRA 126
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
AD K+PDN+S EE A C ++ A + P V I G G G V + A+
Sbjct: 127 AADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGFGHVAVQYAK 185
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
A G +V VD+ D +L +AKELGAD +V + E+ K K G+ + A
Sbjct: 186 AMGL-NVVAVDIGDEKLELAKELGADLVV------NPLKEDAAKFMKEKVGGVHAAVVTA 238
Query: 263 GFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKNTWPLCLEL 321
+A ++ R GG LVG+ EM +P+ + + ++G + + L+
Sbjct: 239 VSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQF 298
Query: 322 LRSGK----IDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364
GK I+V+PL +++ E F+ +G +V+ L
Sbjct: 299 AAEGKVKTIIEVQPL---------EKINEVFDRMLKGQINGRVVLTL 336
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 144/320 (45%), Gaps = 19/320 (5%)
Query: 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
N L I E+P+ +V V++K GICGSD H R + K P VIGHE GVI+
Sbjct: 30 NQLSIIEREIPTPSAGEVRVKVKLAGICGSDSH---IYRGHNPFAKYPRVIGHEFFGVID 86
Query: 87 KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVH 144
VG V++ G+RVA++P +SC C C G+ N+C + VH G + V
Sbjct: 87 AVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLG---VHADGGFSEYAVV 143
Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGL-VTMLGARA 203
PA +K+P+ V+ + M EP ++ + VL+ GAGPIGL + +
Sbjct: 144 PAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVLKGV 203
Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNL--QDIAEEVEKIQKAMGTGIDVSFDC 261
+ +++ D D RL AKE GAD + S + AE+ G + D
Sbjct: 204 YNVKNVIVADRIDERLEKAKESGADWAINNSQTPLGESFAEK--------GIKPTLIIDA 255
Query: 262 AGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLEL 321
A + A++ ++ L+G V +E+ + N +P+ ++
Sbjct: 256 ACHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIFSSRLNANKFPVVIDW 315
Query: 322 LRSGKIDVKPLVTHRFGFSQ 341
L G I + L+TH F F
Sbjct: 316 LSKGLIKPEKLITHTFDFQH 335
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 149/316 (47%), Gaps = 20/316 (6%)
Query: 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
G L++ +P GP +V VR+KA + DV K + + P V+G + +GV
Sbjct: 11 GPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPL--PHVLGADGSGV 68
Query: 85 IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
++ VG V+ PGD V + PG+SC RC+ C G NLCP + HG+ A VV
Sbjct: 69 VDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE-HRHGTYAEYVVL 127
Query: 145 PADLCFKLPDNVSLEEGAMCEPLSVGLHACR----RANIGPETNVLIMGAGP-IGLVTML 199
P P N+S EE A PL+ L A + + + P +VL+M AG + + +
Sbjct: 128 PEANLAPKPKNLSFEEAAAI-PLTF-LTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQ 185
Query: 200 GARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSF 259
A+ FGA R++ + +L AK LGAD V + D +EV ++ G G D
Sbjct: 186 IAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTH--PDWPKEVRRLTG--GKGADKVV 240
Query: 260 DCAGFNKTMSTALSATRAGGKVCLVGMGH-HEMTVPLTPAAVREVDVVG-VFRYKNTWPL 317
D G + AT GG++ + G +E T+P R++ ++G K+
Sbjct: 241 DHTG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFP 299
Query: 318 CLELLRSGKIDVKPLV 333
L + GK+ KP+V
Sbjct: 300 ILRFVEEGKL--KPVV 313
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 153/330 (46%), Gaps = 17/330 (5%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
LK++ +P VL++++A G+C SDVH + LR D VK P+ +GHE AG
Sbjct: 13 LKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84 VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
IE+VG EV GD VA+ P C +C+ G +LC ++ G+ A V+
Sbjct: 73 RIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGI-NYDGAYAEYVL 131
Query: 144 HP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVTMLGA 201
P +KL ++E + A R+A++ P ++++GA G +G + + A
Sbjct: 132 VPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIA 191
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
+A I+ VDV + L AK GAD ++ S+ QD E+ +I + G G D D
Sbjct: 192 KAVSGATIIGVDVREEALEAAKRAGADYVINASS--QDPVSEIRRITQ--GKGADAVIDL 247
Query: 262 AGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL-CLE 320
KT+S GK +VG+ ++ + EV +G + L +
Sbjct: 248 NNSEKTLSIYPYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFIGSLVGNQSDFLGIMS 307
Query: 321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFET 350
L +GK VKP+VT +E EA +
Sbjct: 308 LAEAGK--VKPMVTKTMKL--EEANEAIDN 333
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 159/351 (45%), Gaps = 42/351 (11%)
Query: 21 AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
AW G + L I+ E+ +V +++ A +C +D++ + A F P+V+GHE
Sbjct: 14 AWKTG-SPLCIEEIEVSPPKACEVRIQVIATCVCHTDINATDPKKKALF----PVVLGHE 68
Query: 81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
CAG++E VG V PGD+V C RC C NLC +++ F P + L
Sbjct: 69 CAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELME 128
Query: 141 Q-------------------------VVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHA 173
VV A+L ++ D +LE + C S A
Sbjct: 129 DRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCGFSSGYGAA 187
Query: 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV 233
A + P + + G G +GL ++G + GA RI+ +D++ + AK LGA + +
Sbjct: 188 INTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCL-- 245
Query: 234 STNLQDIAEEVEK-IQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEM 291
N +++ + V+ I + G+D S DCAG +T+ A+ T G G +VG EM
Sbjct: 246 --NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEM 303
Query: 292 TVPLTPAAV-REVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 339
T+P + R ++ G ++ ++ P + ++ K D+ LVTH F
Sbjct: 304 TIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF 354
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 163/370 (44%), Gaps = 51/370 (13%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVS----GTLVAPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
G V T+ PGD+V C +C CK NLC +K + P
Sbjct: 77 GEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTSRFTCRGK 134
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
P+H L + + D +S+ + PL S G A + A +
Sbjct: 135 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQ 190
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
+ + G G +GL ++G +A GA RI+ VD++ + + AKE+GA V N QD
Sbjct: 191 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 246
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
+ ++++ M G+D SF+ G TM ALS + A G +VG+ + + P
Sbjct: 247 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPML 306
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
+ + G F+ K++ P + + K + PL+TH F +++ E F+ R
Sbjct: 307 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 363
Query: 355 GTAIKVMFNL 364
G +I+ +
Sbjct: 364 GKSIRTILTF 373
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 163/370 (44%), Gaps = 51/370 (13%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVS----GTLVAPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
G V T+ PGD+V C +C CK NLC +K + P
Sbjct: 77 GEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTSRFTCRGK 134
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
P+H L + + D +S+ + PL S G A + A +
Sbjct: 135 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQ 190
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
+ + G G +GL ++G +A GA RI+ VD++ + + AKE+GA V N QD
Sbjct: 191 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 246
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
+ ++++ M G+D SF+ G TM ALS + A G +VG+ + + P
Sbjct: 247 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPML 306
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
+ + G F+ K++ P + + K + PL+TH F +++ E F+ R
Sbjct: 307 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 363
Query: 355 GTAIKVMFNL 364
G +I+ +
Sbjct: 364 GKSIRTILTF 373
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 159/351 (45%), Gaps = 42/351 (11%)
Query: 21 AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
AW G + L I+ E+ +V +++ A +C +D++ + A F P+V+GHE
Sbjct: 14 AWKTG-SPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALF----PVVLGHE 68
Query: 81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
CAG++E VG V PGD+V C RC C NLC +++ F P + L
Sbjct: 69 CAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELME 128
Query: 141 Q-------------------------VVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHA 173
VV A+L ++ D +LE + C S A
Sbjct: 129 DRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVCLIGCGFSSGYGAA 187
Query: 174 CRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKV 233
A + P + + G G +GL ++G + GA RI+ +D++ + AK LGA + +
Sbjct: 188 INTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCL-- 245
Query: 234 STNLQDIAEEVEK-IQKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEM 291
N +++ + V+ I + G+D S DCAG +T+ A+ T G G +VG EM
Sbjct: 246 --NPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEM 303
Query: 292 TVPLTPAAV-REVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGF 339
T+P + R ++ G ++ ++ P + ++ K D+ LVTH F
Sbjct: 304 TIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF 354
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 162/370 (43%), Gaps = 50/370 (13%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
G V T+ PGD+V C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
P+H L + + D +S+ + PL S G A + A +
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
+ + G G +GL ++G +A GA RI+ VD++ + + AKE+GA V N QD
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
+ ++++ M G+D SF+ G TM TALS + A G +VG+ + + P
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPML 307
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
+ + G F+ K++ P + + K + PL+TH F +++ E F+ R
Sbjct: 308 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
G +I+ +
Sbjct: 365 GESIRTILTF 374
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 155/354 (43%), Gaps = 47/354 (13%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ Y+V ++M AVGICG+D H + + V P+++GHE AG++E V
Sbjct: 21 FSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MKFFAT--PP 133
G V T+ PGD+V C +C CK N C + + F P
Sbjct: 77 GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 136
Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGPE 182
+H L + + D ++ + PL S G A A + P
Sbjct: 137 IHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPG 192
Query: 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242
+ + G G +GL ++G +A GA RI+ VD++ + + AKELGA + N QD +
Sbjct: 193 STCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKK 248
Query: 243 EVEKIQKAMGT-GIDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP--- 297
++++ K M G+D SF+ G + M++ L A G +VG+ + + P
Sbjct: 249 PIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLL 308
Query: 298 --AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
+ V G F+ K P + + K + L+TH F +++ E F+
Sbjct: 309 LTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFD 360
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 162/370 (43%), Gaps = 50/370 (13%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
G V T+ PGD+V C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
P+H L + + D +S+ + PL S G A + A +
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
+ + G G +GL ++G +A GA RI+ VD++ + + AKE+GA V N QD
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
+ ++++ M G+D SF+ G TM TALS + A G +VG+ + + P
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPML 307
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
+ + G F+ K++ P + + K + PL+TH F +++ E F+ R
Sbjct: 308 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
G +I+ +
Sbjct: 365 GESIRTILTF 374
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 162/370 (43%), Gaps = 50/370 (13%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
G V T+ PGD+V C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
P+H L + + D +S+ + PL S G A + A +
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
+ + G G +GL ++G +A GA RI+ VD++ + + AKE+GA V N QD
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
+ ++++ M G+D SF+ G TM TALS + A G +VG+ + + P
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPML 307
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
+ + G F+ K++ P + + K + PL+TH F +++ E F+ R
Sbjct: 308 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
G +I+ +
Sbjct: 365 GESIRTILTF 374
>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of C. Beijerinckii
Adh By T. Brockii Adh
Length = 351
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 154/352 (43%), Gaps = 49/352 (13%)
Query: 23 LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
+LG+N L E P G YD +VR AV C SD+H + D ++ M++GHE
Sbjct: 6 MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83 GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGS 137
G + +VGSEVK PGDRV + WR + G M KF V G
Sbjct: 63 GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGE 122
Query: 138 LANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGL 195
+ V+ AD+ LP ++ LE M + ++ G H A+I V ++G GP+GL
Sbjct: 123 YFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIELGATVAVLGIGPVGL 180
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
+ + GA+ GA RI+ V + AK GA +IV N +D E + + G G+
Sbjct: 181 MAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGV 236
Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLV------------------GMGHHEMTVPLTP 297
D + G M+TA+ + GG + V GM H + L P
Sbjct: 237 DAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCP 296
Query: 298 AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 348
G R + + +++ ++D+ LVTH + GF +EEA
Sbjct: 297 G--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334
>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|B Chain B, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|C Chain C, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|D Chain D, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
Length = 352
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 149/340 (43%), Gaps = 49/340 (14%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
E P+ GP+D +VR AV C SD+H T+ + M++GHE G + +VGSEVK
Sbjct: 18 EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
PGDRV + WR + G + M KF V G + V+ AD+
Sbjct: 75 FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
LP + LE M + ++ G H A+I V ++G GP+GL+ + GA+ GA
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAGAKLRGAG 192
Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
RI+ V + AK GA +IV N +D E + + G G+D + G
Sbjct: 193 RIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGVDAAIIAGGNADI 248
Query: 268 MSTALSATRAGGKVCLV------------------GMGHHEMTVPLTPAAVREVDVVGVF 309
M+TA+ + GG + V GM H + L P G
Sbjct: 249 MATAVKIVKPGGTIANVNYFGEGEVLDVPRLEWGCGMAHKTIKGGLCPG--------GRL 300
Query: 310 RYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 348
R + ++L+ ++D LVTH F GF +E+AF
Sbjct: 301 RMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 162/370 (43%), Gaps = 50/370 (13%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
G V T+ PGD+V C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
P+H L + + D +S+ + PL S G A + A +
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
+ + G G +GL ++G +A GA RI+ VD++ + + AKE+GA V N QD
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTPAA 299
+ ++++ M G+D SF+ G TM TALS + A G +VG+ + + P
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPML 307
Query: 300 VREVD-----VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
+ + G F+ K++ P + + K + PL+TH F +++ E F+ R
Sbjct: 308 LLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
G +I+ +
Sbjct: 365 GESIRTILTF 374
>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|B Chain B, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|C Chain C, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|D Chain D, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1BXZ|A Chain A, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|B Chain B, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|C Chain C, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|D Chain D, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
Length = 352
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 149/340 (43%), Gaps = 49/340 (14%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
E P+ GP+D +VR AV C SD+H T+ + M++GHE G + +VGSEVK
Sbjct: 18 EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
PGDRV + WR + G + M KF V G + V+ AD+
Sbjct: 75 FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
LP + LE M + ++ G H A+I V ++G GP+GL+ + GA+ GA
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAGAKLRGAG 192
Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
RI+ V + AK GA +IV N +D E + + G G+D + G
Sbjct: 193 RIIAVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGVDAAIIAGGNADI 248
Query: 268 MSTALSATRAGGKVCLV------------------GMGHHEMTVPLTPAAVREVDVVGVF 309
M+TA+ + GG + V GM H + L P G
Sbjct: 249 MATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCPG--------GRL 300
Query: 310 RYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 348
R + ++L+ ++D LVTH F GF +E+AF
Sbjct: 301 RMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 161/370 (43%), Gaps = 50/370 (13%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
G V T+ PGD+V C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
P+H L + + D +S+ + PL S G A + A +
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
+ + G G +GL ++G +A GA RI+ VD++ R + AKE+GA V N QD
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
+ ++++ M G+D SF+ G TM TALS + A G +VG+ + + P
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPML 307
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
+ + G F+ K++ P + + K + PL+TH F +++ E F+ R
Sbjct: 308 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
G +I+ +
Sbjct: 365 GESIRTILTF 374
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 161/370 (43%), Gaps = 50/370 (13%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
G V T+ PGD+V C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
P+H L + + D +S+ + PL S G A + A +
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
+ + G G GL ++G +A GA RI+ VD++ + + AKE+GA V N QD
Sbjct: 192 GSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
+ ++++ M G+D SF+ G TM TALS + A G +VG+ + + P
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPML 307
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
+ + G F+ K++ P + + K + PL+TH F +++ E F+ R
Sbjct: 308 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
G +I+ +
Sbjct: 365 GESIRTILTF 374
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 161/370 (43%), Gaps = 50/370 (13%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
G V T+ PGD+V C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
P+H L + + D +S+ + PL S G A + A +
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
+ + G G +GL ++G +A GA RI+ VD++ + + AKE+GA V N QD
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
+ ++++ M G+D SF+ G TM TALS + A G + G+ + + P
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDSQNLSMNPML 307
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
+ + G F+ K++ P + + K + PL+TH F +++ E F+ R
Sbjct: 308 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
G +I+ +
Sbjct: 365 GESIRTILTF 374
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 161/370 (43%), Gaps = 50/370 (13%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
G V T+ PGD+V C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
P+H L + + D +S+ + PL S G A + A +
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
+ + G G GL ++G +A GA RI+ VD++ + + AKE+GA V N QD
Sbjct: 192 GSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
+ ++++ M G+D SF+ G TM TALS + A G +VG+ + + P
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPML 307
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
+ + G F+ K++ P + + K + PL+TH F +++ E F+ R
Sbjct: 308 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
G +I+ +
Sbjct: 365 GESIRTILTF 374
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 161/370 (43%), Gaps = 50/370 (13%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
G V T+ PGD+V C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
P+H L + + D +S+ + PL S G A + A +
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
+ + G G +GL ++G +A GA RI+ VD++ + + AKE+GA V N QD
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
+ ++++ M G+D SF+ G TM TALS + A G +V + + + P
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDSQNLSMNPML 307
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
+ + G F+ K++ P + + K + PL+TH F +++ E F+ R
Sbjct: 308 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
G +I+ +
Sbjct: 365 GESIRTILTF 374
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 158/366 (43%), Gaps = 47/366 (12%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ Y+V ++M AVGIC +D H + + V P+++GHE AG++E V
Sbjct: 21 FSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MKFFAT--PP 133
G V T+ PGD+V C +C CK N C + + F P
Sbjct: 77 GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 136
Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGPE 182
+H L + + D ++ + PL S G A A + P
Sbjct: 137 IHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPG 192
Query: 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242
+ + G G +GL ++G +A GA RI+ VD++ + + AKELGA + N QD +
Sbjct: 193 STCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKK 248
Query: 243 EVEKIQKAMGT-GIDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP--- 297
++++ K M G+D SF+ G + M++ L A G +VG+ + + P
Sbjct: 249 PIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLL 308
Query: 298 --AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG 355
+ V G F+ K P + + K + L+TH F +++ E F+ G
Sbjct: 309 LTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFDLLHSGK 366
Query: 356 TAIKVM 361
+ V+
Sbjct: 367 SICTVL 372
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 39/350 (11%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M AVGICG+D H + V P+++GHE AG++E V
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVS----GTMVTPLPVILGHEAAGIVESV 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC-------PE-------MKFFAT-PP 133
G V T+ PGD+V C +C CK N C P+ +F P
Sbjct: 77 GEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNPQGTLQDGTSRFTCRRKP 136
Query: 134 VH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL-HACRRANIGPETNVL 186
+H + + V + K+ LE+ + S G A A + P +
Sbjct: 137 IHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCA 196
Query: 187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK 246
+ G G +GL ++G +A GA RI+ VD++ + + AKELGA + N QD + +++
Sbjct: 197 VFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKKPIQE 252
Query: 247 IQKAMGT-GIDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVR--- 301
+ K M G+D SF+ G + M++ L A G +VG+ + + P +
Sbjct: 253 VLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSMNPMLLLTGR 312
Query: 302 --EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
+ ++G F+ K P + + K + L+TH F +++ E F+
Sbjct: 313 TWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPF--EKINEGFD 360
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 161/370 (43%), Gaps = 50/370 (13%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + V P++ GHE AG++E +
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESI 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP---------------- 132
G V T+ PGD+V C +C CK N C + + P
Sbjct: 77 GEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDL-SMPRGTMQDGTSRFTCRGK 135
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGP 181
P+H L + + D +S+ + PL S G A + A +
Sbjct: 136 PIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQ 191
Query: 182 ETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIA 241
+ + G G +GL ++G +A GA RI+ VD++ + + AKE+GA V N QD
Sbjct: 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV----NPQDYK 247
Query: 242 EEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATR-AGGKVCLVGMGHHEMTVPLTP-- 297
+ ++++ M G+D SF+ G TM TALS + A G + G+ + + P
Sbjct: 248 KPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDSQNLSMNPML 307
Query: 298 ---AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARG 354
+ + G F+ K++ P + + K + PL+TH F +++ E F+ R
Sbjct: 308 LLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRS 364
Query: 355 GTAIKVMFNL 364
G +I+ +
Sbjct: 365 GESIRTILTF 374
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 154/307 (50%), Gaps = 18/307 (5%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
EL ++ P + L+ M+ G+C +D+H + DF K V+GHE G+++++G++V +
Sbjct: 20 ELRAIKPNEALLDMEYCGVCHTDLH----VAAGDFGNKAGTVLGHEGIGIVKEIGADVSS 75
Query: 95 LVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP 153
L GDRV++ C C++C G C E+K A V G +A + + AD K+P
Sbjct: 76 LQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVK-NAGYSVDGGMAEEAIVVADYAVKVP 134
Query: 154 DNVSLEEGAMCEPLSVGLH-ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIV 212
D + E + V + A + + + P +I GAG +G + + A+ +++ V
Sbjct: 135 DGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAV 194
Query: 213 DVDDYRLSVAKELGADNIVKVSTNLQDI--AEEVEKIQKAMGTGIDVSFDCAGFNKTMST 270
D++ +L++AK++GAD V+ N D+ +E++KI G G+ + CA
Sbjct: 195 DINQDKLNLAKKIGAD----VTINSGDVNPVDEIKKITG--GLGVQSAIVCAVARIAFEQ 248
Query: 271 ALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKNTWPLCLELLRSGKIDV 329
A+++ + GK+ V + + EMT+ + V+V G + + + GK V
Sbjct: 249 AVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGK--V 306
Query: 330 KPLVTHR 336
KP+V R
Sbjct: 307 KPIVATR 313
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 154/354 (43%), Gaps = 47/354 (13%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ Y+V ++M AVGIC +D H + + V P+++GHE AG++E V
Sbjct: 21 FSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MKFFAT--PP 133
G V T+ PGD+V C +C CK N C + + F P
Sbjct: 77 GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 136
Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGPE 182
+H L + + D ++ + PL S G A A + P
Sbjct: 137 IHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPG 192
Query: 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242
+ + G G +GL ++G +A GA RI+ VD++ + + AKELGA + N QD +
Sbjct: 193 STCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKK 248
Query: 243 EVEKIQKAMGT-GIDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP--- 297
++++ K M G+D SF+ G + M++ L A G +VG+ + + P
Sbjct: 249 PIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLL 308
Query: 298 --AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
+ V G F+ K P + + K + L+TH F +++ E F+
Sbjct: 309 LTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFD 360
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 154/354 (43%), Gaps = 47/354 (13%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ Y+V ++M AVGIC +D H + + V P+++GHE AG++E V
Sbjct: 21 FSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-------------MKFFAT--PP 133
G V T+ PGD+V C +C CK N C + + F P
Sbjct: 77 GEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKP 136
Query: 134 VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGL-HACRRANIGPE 182
+H L + + D ++ + PL S G A A + P
Sbjct: 137 IHHFLGTSTFSQ----YTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPG 192
Query: 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242
+ + G G +GL ++G +A GA RI+ VD++ + + AKELGA + N QD +
Sbjct: 193 STCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKK 248
Query: 243 EVEKIQKAMGT-GIDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP--- 297
++++ K M G+D SF+ G + M++ L A G +VG+ + + P
Sbjct: 249 PIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLL 308
Query: 298 --AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
+ V G F+ K P + + K + L+TH F +++ E F+
Sbjct: 309 LTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFD 360
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 163/365 (44%), Gaps = 40/365 (10%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ ++V ++M A GIC SD H + + V P+++GHE AG++E V
Sbjct: 21 FSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVS----GNLVTPLPVILGHEAAGIVESV 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE--------------MKFFAT-PP 133
G V T+ PGD+V C +C CK N C + +F + P
Sbjct: 77 GEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFTCSGKP 136
Query: 134 VH-----GSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGL-HACRRANIGPETNVL 186
+H + + V + K+ LE+ + S G A + A + P +
Sbjct: 137 IHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCA 196
Query: 187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK 246
+ G G +GL ++G +A GA RI+ VD++ + + AKELGA + N QD + +++
Sbjct: 197 VFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECI----NPQDYKKPIQE 252
Query: 247 IQKAMGT-GIDVSFDCAG-FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP-----AA 299
+ K M G+D SF+ G + M++ L A G +VG+ + + P
Sbjct: 253 VLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLTGR 312
Query: 300 VREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIK 359
+ + G F+ K + P + + K + L+T+ F +++ E F+ R G +I+
Sbjct: 313 TWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPF--EKINEGFDL-LRSGKSIR 369
Query: 360 VMFNL 364
+
Sbjct: 370 TVLTF 374
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 154/307 (50%), Gaps = 18/307 (5%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
EL ++ P + L+ M+ G+C +D+H + D+ K V+GHE G+++++G++V +
Sbjct: 20 ELRAIKPNEALLDMEYCGVCHTDLH----VAAGDYGNKAGTVLGHEGIGIVKEIGADVSS 75
Query: 95 LVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLP 153
L GDRV++ C C++C G C E+K A V G +A + + AD K+P
Sbjct: 76 LQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKN-AGYSVDGGMAEEAIVVADYAVKVP 134
Query: 154 DNVSLEEGAMCEPLSVGLH-ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIV 212
D + E + V + A + + + P +I GAG +G + + A+ +++ V
Sbjct: 135 DGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAV 194
Query: 213 DVDDYRLSVAKELGADNIVKVSTNLQDI--AEEVEKIQKAMGTGIDVSFDCAGFNKTMST 270
D++ +L++AK++GAD I+ N D+ +E++KI G G+ + CA
Sbjct: 195 DINQDKLNLAKKIGADVII----NSGDVNPVDEIKKITG--GLGVQSAIVCAVARIAFEQ 248
Query: 271 ALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG-VFRYKNTWPLCLELLRSGKIDV 329
A+++ + GK+ V + + EMT+ + V+V G + + + GK V
Sbjct: 249 AVASLKPMGKMVAVALPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGK--V 306
Query: 330 KPLVTHR 336
KP+V R
Sbjct: 307 KPIVATR 313
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
Length = 352
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 147/340 (43%), Gaps = 49/340 (14%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
E P+ GP+D +VR AV C SD+H T+ + M++GHE G + +VGSEVK
Sbjct: 18 EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
PGDRV + WR + G + M KF V G + V+ AD+
Sbjct: 75 FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
LP + LE M + ++ G H ANI V ++G GP+GL+++ GA GA
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAG 192
Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
RI V + +A E GA +I+ DI E++ K G G+D G T
Sbjct: 193 RIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQILKATD--GKGVDKVVIAGGDVHT 248
Query: 268 MSTALSATRAGGKV------------------CLVGMGHHEMTVPLTPAAVREVDVVGVF 309
+ A+ + G + VGMGH + L P G
Sbjct: 249 FAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPG--------GRL 300
Query: 310 RYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 348
R + ++L+ ++D LVTH F GF +E+AF
Sbjct: 301 RMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 146/335 (43%), Gaps = 33/335 (9%)
Query: 37 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
P+ GP ++L+++ A G+C SD+ ++ + A + P+ +GHE G + ++G V
Sbjct: 21 PTPGPGEILLKVTAAGLCHSDI-FVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFG 79
Query: 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFA-TPPVHGSLANQ----VVHPADLCFK 151
GD VA+ C C C GR N C TPP GS + +V A
Sbjct: 80 VGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVP 139
Query: 152 LPDNVSLEEGAMCEPLSVGLHACRRAN--IGPETNVLIMGAGPIGLVTMLGARAFGAPRI 209
+ D + + + HA R +GP + +++G G +G V + RA A R+
Sbjct: 140 IGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARV 199
Query: 210 VIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMS 269
+ VD+DD RL++A+E+GAD VK D E+ G G FD G T+
Sbjct: 200 IAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTG-----GQGATAVFDFVGAQSTID 254
Query: 270 TALSATRAGGKVCLVGM---GHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLE---LLR 323
TA G + +VG+ H ++ + P V Y T +E L R
Sbjct: 255 TAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVT-----PYWGTRSELMEVVALAR 309
Query: 324 SGKIDVKPLVTHRFGFSQKEVEEAF----ETSARG 354
+G++D+ H F+ E A+ E S RG
Sbjct: 310 AGRLDI-----HTETFTLDEGPAAYRRLREGSIRG 339
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 138/285 (48%), Gaps = 20/285 (7%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM--VIGHECAGVIE 86
L+I+ ++P GP VLV+++A G+C +D+H + D+ VK P+ + GHE G +
Sbjct: 19 LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAE----GDWPVKPPLPFIPGHEGVGYVA 74
Query: 87 KVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
VGS V + GDRV + P + +C C+HC G LC E + V+G A V+
Sbjct: 75 AVGSGVTRVKEGDRVGI-PWLYTACGCCEHCLTGWETLC-ESQQNTGYSVNGGYAEYVLA 132
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
+ LP NV E A +C ++V ++ N P V I G G +G V + AR
Sbjct: 133 DPNYVGILPKNVEFAEIAPILCAGVTV-YKGLKQTNARPGQWVAISGIGGLGHVAVQYAR 191
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
A G + +D+DD +L +A++LGA V + VE IQ+ +G G A
Sbjct: 192 AMGL-HVAAIDIDDAKLELARKLGASLTVNARQE-----DPVEAIQRDIG-GAHGVLVTA 244
Query: 263 GFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 307
N A+ R GG + LVG+ + P+ ++ + + G
Sbjct: 245 VSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAG 289
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 158/352 (44%), Gaps = 49/352 (13%)
Query: 23 LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
+LG+N L E P G YD +VR AV C SD+H + D ++ M++GHE
Sbjct: 6 MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83 GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGS 137
G + +VGSEVK PGDRV + WR + G M KF V G
Sbjct: 63 GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGE 122
Query: 138 LANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGL 195
+ V+ AD+ LP ++ LE M + ++ G H A+I ++V+++G G +GL
Sbjct: 123 YFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGIGAVGL 180
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
+ + GA+ GA RI+ V + AK GA +I+ I ++V K+ G G+
Sbjct: 181 MGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGV 236
Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLV------------------GMGHHEMTVPLTP 297
D G ++T+S A+S + GG + + GM H + L P
Sbjct: 237 DRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCP 296
Query: 298 AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 348
G R + + +++ ++D+ LVTH + GF +EEA
Sbjct: 297 G--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 158/352 (44%), Gaps = 49/352 (13%)
Query: 23 LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
+LG+N L E P G YD +VR AV C SD+H + D ++ M++GHE
Sbjct: 6 MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83 GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGG----RYNLCPEMKFFATPP-VHGS 137
G + +VGSEVK PGDRV + WR + G + KF V G
Sbjct: 63 GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFPQHSNGMLAGWKFSNFKDGVFGE 122
Query: 138 LANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGL 195
+ V+ AD+ LP ++ LE M + ++ G H A+I ++V+++G G +GL
Sbjct: 123 YFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGIGAVGL 180
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
+ + GA+ GA RI+ V + AK GA +I+ I ++V K+ G G+
Sbjct: 181 MGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGV 236
Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLV------------------GMGHHEMTVPLTP 297
D G ++T+S A+S + GG + + GM H + L P
Sbjct: 237 DRVIMAGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCP 296
Query: 298 AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 348
G R + + +++ ++D+ LVTH + GF +EEA
Sbjct: 297 G--------GRLRAE----MLRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 153/340 (45%), Gaps = 49/340 (14%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
E P+ GP+D +VR AV C SD+H T+ + M++GHE G + +VGSEVK
Sbjct: 18 EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
PGDRV + WR + G + M KF V G + V+ AD+
Sbjct: 75 FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
LP + LE M + ++ G H A+I ++V+++G G +GL+ + GA+ GA
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAG 192
Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
RI+ V + AK GA +I+ I ++V K+ G G+D G ++T
Sbjct: 193 RIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGVDRVIMAGGGSET 248
Query: 268 MSTALSATRAGGKVCLV------------------GMGHHEMTVPLTPAAVREVDVVGVF 309
+S A+S + GG + + GM H + L P G
Sbjct: 249 LSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG--------GRL 300
Query: 310 RYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 348
R + ++L+ ++D LVTH F GF +E+AF
Sbjct: 301 RMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 165/369 (44%), Gaps = 47/369 (12%)
Query: 21 AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
AW G L I+ E+ ++V +++ A +C +D + + + P+++GHE
Sbjct: 16 AWEAG-KPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEG---LAFPVIVGHE 71
Query: 81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATP-------- 132
AG++E +G V + PGD+V C +C C NLC ++ +P
Sbjct: 72 AAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLME 131
Query: 133 -----------PVH----GSLANQVVHPADLCF-KLPDNVSLEEGAMCEPLSVGLH---- 172
PV+ S +Q +D+ K+ D+ +LE + L G
Sbjct: 132 DKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCL---LGCGFSTGYG 188
Query: 173 -ACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIV 231
A A + P + + G G +GL ++G +A GA RI+ +D++ + AK LGA + +
Sbjct: 189 AAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDCL 248
Query: 232 KVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCL---VGMGH 288
+ I E + ++ K G+D + DCAG ++TM AL T AG C V G
Sbjct: 249 NPRDLHKPIQEVIIELTKG---GVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAAGS 305
Query: 289 HEMTV-PLTPAAVREVD--VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVE 345
+TV P R ++ G ++ ++ P + ++ K ++ LVTH F + +
Sbjct: 306 KGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDK--IS 363
Query: 346 EAFETSARG 354
EAF+ +G
Sbjct: 364 EAFDLMNQG 372
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 150/350 (42%), Gaps = 45/350 (12%)
Query: 23 LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
+LG+ + ++P GP D LVR A+ C SD H + D + M++GHE
Sbjct: 6 MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTHTVWAGAIGD---RHDMILGHEAV 62
Query: 83 GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGR-YNLCPEMKFFATPPVHGSLANQ 141
G I KVGS VK L GD+V + W + + G + + + + ++
Sbjct: 63 GQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRGYPMHSGGMLGGWKFSNFKDGVFSE 122
Query: 142 VVH----PADLCFKLPDNVSLEEGAMCEPL-SVGLHACRRANIGPETNVLIMGAGPIGLV 196
V H A+L LP ++ E+ M + + G H ANI V ++G GP+GL+
Sbjct: 123 VFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGIGPVGLM 181
Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256
++ GA GA RI V + +A E GA +I+ DI E++ ++ G G+D
Sbjct: 182 SVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQI--LKATDGKGVD 237
Query: 257 VSFDCAGFNKTMSTALSATRAGGKV------------------CLVGMGHHEMTVPLTPA 298
G T + A+ + G + VGMGH + LTP
Sbjct: 238 KVVIAGGXVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLTPG 297
Query: 299 AVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 348
G R + L+ +GK+D L+THRF +K VE+A
Sbjct: 298 --------GRVRMEK----LASLISTGKLDTSKLITHRFEGLEK-VEDAL 334
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 123/264 (46%), Gaps = 18/264 (6%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
L I +P GP + V ++A G+C +D+H + D+ VK P + GHE G +
Sbjct: 38 LTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAE----GDWPVKPNPPFIPGHEGVGFVS 93
Query: 87 KVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
VGS VK + GDRV + P + +C C HC GG LC E + V+G A VV
Sbjct: 94 AVGSGVKHVKEGDRVGI-PWLYTACGHCRHCLGGWETLCEE-QLNTGYSVNGGFAEYVVA 151
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
+ LP N+ E A +C ++V + + P V+I G G +G + + AR
Sbjct: 152 DPNFVGHLPKNIDFNEIAPVLCAGVTV-YKGLKVTDTKPGDWVVISGIGGLGHMAVQYAR 210
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
A G + VD+DD +L +A+ LGA V+ N + +A+ I+K G A
Sbjct: 211 AMGL-NVAAVDIDDRKLDLARRLGA----TVTVNAKTVADPAAYIRKETDGGAQGVLVTA 265
Query: 263 GFNKTMSTALSATRAGGKVCLVGM 286
K AL GG V L G+
Sbjct: 266 VSPKAFEQALGMVARGGTVSLNGL 289
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 152/340 (44%), Gaps = 49/340 (14%)
Query: 35 ELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKT 94
E P+ GP+D +VR AV C SD+H T+ + M++GHE G + +VGSEVK
Sbjct: 18 EKPAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKD 74
Query: 95 LVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGSLANQVVHPADLC 149
PGDRV + WR + G + M KF V G + V+ AD+
Sbjct: 75 FKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFH--VNDADMN 132
Query: 150 F-KLPDNVSLEEGAMC-EPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
LP + LE M + ++ G H A+I ++V+++G G +GL+ + GA+ GA
Sbjct: 133 LAHLPKEIPLEAAVMIPDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAG 192
Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
RI+ V + AK GA +I+ I ++V K+ G G+D G ++T
Sbjct: 193 RIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGVDRVIMAGGGSET 248
Query: 268 MSTALSATRAGGKVCLV------------------GMGHHEMTVPLTPAAVREVDVVGVF 309
+S A+ + GG + + GM H + L P G
Sbjct: 249 LSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG--------GRL 300
Query: 310 RYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 348
R + ++L+ ++D LVTH F GF +E+AF
Sbjct: 301 RMER----LIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 149/350 (42%), Gaps = 45/350 (12%)
Query: 23 LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
+LG+ + ++P GP D LVR A+ C SD H + D + M++GHE
Sbjct: 6 MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTHTVWAGAIGD---RHDMILGHEAV 62
Query: 83 GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGR-YNLCPEMKFFATPPVHGSLANQ 141
G I KVGS VK L GD+V + W + + G + + + + ++
Sbjct: 63 GQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRGYPMHSGGMLGGWKFSNFKDGVFSE 122
Query: 142 VVH----PADLCFKLPDNVSLEEGAMCEPL-SVGLHACRRANIGPETNVLIMGAGPIGLV 196
V H A+L LP ++ E+ M + + G H ANI V ++G GP+GL+
Sbjct: 123 VFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGIGPVGLM 181
Query: 197 TMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGID 256
++ GA GA RI V + +A E GA +I+ DI E++ K G G+D
Sbjct: 182 SVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKNG--DIVEQILKATD--GKGVD 237
Query: 257 VSFDCAGFNKTMSTALSATRAGGKV------------------CLVGMGHHEMTVPLTPA 298
G T + A+ + G + VGMGH + LTP
Sbjct: 238 KVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIPIPRSEWGVGMGHKHIHGGLTPG 297
Query: 299 AVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAF 348
G R + L+ +GK+D L+THRF +K VE+A
Sbjct: 298 --------GRVRMEK----LASLISTGKLDTSKLITHRFEGLEK-VEDAL 334
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 156/352 (44%), Gaps = 49/352 (13%)
Query: 23 LLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECA 82
+LG+N L E P G YD +VR AV C SD+H + D ++ M++GHE
Sbjct: 6 MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAV 62
Query: 83 GVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEM----KFFATPP-VHGS 137
G + +VGSEVK PGDRV + WR + G M KF V G
Sbjct: 63 GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGE 122
Query: 138 LANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGLHACRRANIGPETNVLIMGAGPIGL 195
+ V+ AD+ LP ++ LE M + ++ G H A+I ++V+++G G +GL
Sbjct: 123 YFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGL 180
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
+ + GA+ GA RI+ V + AK GA +I+ I ++V K+ G G+
Sbjct: 181 MGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIEDQVMKLTN--GKGV 236
Query: 256 DVSFDCAGFNKTMSTALSATRAGGKVCLV------------------GMGHHEMTVPLTP 297
D G ++T+S A+ + GG + + GM H + L P
Sbjct: 237 DRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCP 296
Query: 298 AAVREVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF-GFSQKEVEEAF 348
G R + +++ ++D+ LVTH + GF +EEA
Sbjct: 297 G--------GRLRAER----LRDMVVYNRVDLSKLVTHVYHGFDH--IEEAL 334
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 135/285 (47%), Gaps = 20/285 (7%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIE 86
L I +P GP V V+++A G+C +D+H D+ VK P + GHE G +
Sbjct: 15 LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAAD----GDWPVKPTLPFIPGHEGVGYVS 70
Query: 87 KVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
VGS V + GDRV + P + +C C+HC G LC E + V+G VV
Sbjct: 71 AVGSGVSRVKEGDRVGV-PWLYSACGYCEHCLQGWETLC-EKQQNTGYSVNGGYGEYVVA 128
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
+ LPD V E A +C ++V + + P V+I G G +G V + AR
Sbjct: 129 DPNYVGLLPDKVGFVEIAPILCAGVTV-YKGLKVTDTRPGQWVVISGIGGLGHVAVQYAR 187
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
A G R+ VD+DD +L++A+ LGA+ V+ N +D + +QK +G G A
Sbjct: 188 AMGL-RVAAVDIDDAKLNLARRLGAE----VAVNARD-TDPAAWLQKEIG-GAHGVLVTA 240
Query: 263 GFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVG 307
K S A+ R GG + L G+ + P+ ++ + + G
Sbjct: 241 VSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRG 285
>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
pdb|1H2B|B Chain B, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
Length = 359
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 13/266 (4%)
Query: 29 LKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEK 87
L+I+ + P L G +DV+VR+ G+C +D+H ++ + K P +GHE G IE+
Sbjct: 28 LRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEE 87
Query: 88 VGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPAD 147
V V+ L GD V L P ++ C C+ G C ++F + G A +
Sbjct: 88 VAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHR 146
Query: 148 LCFKLPDNVSLEEGAMCEPLS-VGLHACRRA-----NIGPETNVLIMGAGPIGLVTMLGA 201
KLP ++S E+ PL+ G+ A R + P V I+G G +G + +
Sbjct: 147 SVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLL 206
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
+ ++ +DV + +L +A+ LGAD++V +D ++V ++ + G G++V+ D
Sbjct: 207 KVMTPATVIALDVKEEKLKLAERLGADHVVDAR---RDPVKQVMELTR--GRGVNVAMDF 261
Query: 262 AGFNKTMSTALSATRAGGKVCLVGMG 287
G T+ G++ +VG G
Sbjct: 262 VGSQATVDYTPYLLGRMGRLIIVGYG 287
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 144/310 (46%), Gaps = 37/310 (11%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
L + FE+ + +LV + + G+CGSDVH R D V P+++GHE AG + +V
Sbjct: 30 LVYKEFEISDIPRGSILVEILSAGVCGSDVH---MFRGEDPRVPLPIILGHEGAGRVVEV 86
Query: 89 GSEVKTL-----VPGDRVALEPGISCWRCDHCKGGRY-NLCPEMKFFAT-------PPVH 135
E + L PGD + GI+C C CK + LCP K + P +
Sbjct: 87 NGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLR 146
Query: 136 GSLANQVV-HPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPET----NVLIMGA 190
G ++ +V P K+ + L+ AM + G A + PE+ V+I GA
Sbjct: 147 GCYSSHIVLDPETDVLKVSEKDDLDVLAMA--MCSGATAYHAFDEYPESFAGKTVVIQGA 204
Query: 191 GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKA 250
GP+GL ++ AR+ GA ++++ RL +A+E+GAD ++ N ++ + VE+ +KA
Sbjct: 205 GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD----LTLNRRETS--VEERRKA 258
Query: 251 M-----GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDV 305
+ G G D + G ++ + R GG + G+ + VP V E V
Sbjct: 259 IMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFK---VYEWLV 315
Query: 306 VGVFRYKNTW 315
+ +K W
Sbjct: 316 LKNATFKGIW 325
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 153/330 (46%), Gaps = 17/330 (5%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
L +Q +P VL++++A G+C SDVH + LR D VK P+ +GHE AG
Sbjct: 13 LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84 VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
IE+VG EV GD VA+ P C +C+ G +LC ++ G+ A V+
Sbjct: 73 KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131
Query: 144 HP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGP-ETNVLIMGAGPIGLVTMLGA 201
P +KL ++E + A R+A++ P +T +++ G +G + + A
Sbjct: 132 VPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIA 191
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
+A I+ VDV + + AK GAD ++ S +QD E+ +I ++ G+D D
Sbjct: 192 KAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--KGVDAVIDL 247
Query: 262 AGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL-CLE 320
KT+S A GK +VG+ ++ + E+ VG + L +
Sbjct: 248 NNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMR 307
Query: 321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFET 350
L +GK VKP++T +E EA +
Sbjct: 308 LAEAGK--VKPMITKTMKL--EEANEAIDN 333
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 153/330 (46%), Gaps = 17/330 (5%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
L +Q +P VL++++A G+C SDVH + LR D VK P+ +GHE AG
Sbjct: 13 LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84 VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
IE+VG EV GD VA+ P C +C+ G +LC ++ G+ A V+
Sbjct: 73 KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131
Query: 144 HP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGP-ETNVLIMGAGPIGLVTMLGA 201
P +KL ++E + A R+A++ P +T +++ G +G + + A
Sbjct: 132 VPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIA 191
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
+A I+ VDV + + AK GAD ++ S +QD E+ +I ++ G+D D
Sbjct: 192 KAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--KGVDAVIDL 247
Query: 262 AGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL-CLE 320
KT+S A GK +VG+ ++ + E+ VG + L +
Sbjct: 248 NYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMR 307
Query: 321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFET 350
L +GK VKP++T +E EA +
Sbjct: 308 LAEAGK--VKPMITKTMKL--EEANEAIDN 333
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 153/330 (46%), Gaps = 17/330 (5%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
L +Q +P VL++++A G+C SDVH + LR D VK P+ +GHE AG
Sbjct: 13 LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84 VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
IE+VG EV GD VA+ P C +C+ G +LC ++ G+ A V+
Sbjct: 73 KIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131
Query: 144 HP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGP-ETNVLIMGAGPIGLVTMLGA 201
P +KL ++E + A R+A++ P +T +++ G +G + + A
Sbjct: 132 VPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIA 191
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
+A I+ VDV + + AK GAD ++ S +QD E+ +I ++ G+D D
Sbjct: 192 KAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--KGVDAVIDL 247
Query: 262 AGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPL-CLE 320
KT+S A GK +VG+ ++ + E+ VG + L +
Sbjct: 248 NYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMR 307
Query: 321 LLRSGKIDVKPLVTHRFGFSQKEVEEAFET 350
L +GK VKP++T +E EA +
Sbjct: 308 LAEAGK--VKPMITKTMKL--EEANEAIDN 333
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 145/314 (46%), Gaps = 15/314 (4%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLK----TLRCA-DFVVKEPMVIGHECAG 83
L +Q +P VL++++A G+C SDVH + LR D VK P+ +GHE AG
Sbjct: 13 LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAG 72
Query: 84 VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
IE+VG EV GD VA+ P C +C+ G +LC ++ G+ A V+
Sbjct: 73 KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVI 131
Query: 144 HP-ADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGP-ETNVLIMGAGPIGLVTMLGA 201
P +KL ++E + A R+A++ P +T +++ G +G + A
Sbjct: 132 VPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQIA 191
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
+A I+ VDV + + AK GAD ++ S +QD E+ +I ++ G+D D
Sbjct: 192 KAVSGATIIGVDVREEAVEAAKRAGADYVINAS--MQDPLAEIRRITES--KGVDAVIDL 247
Query: 262 AGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCL-E 320
KT+S A GK VG+ ++ + E+ VG + L +
Sbjct: 248 NNSEKTLSVYPKALAKQGKYVXVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIXR 307
Query: 321 LLRSGKIDVKPLVT 334
L +GK VKP +T
Sbjct: 308 LAEAGK--VKPXIT 319
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 122/274 (44%), Gaps = 48/274 (17%)
Query: 43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
+VLV++ A G+C +D+ +R + V P V+GHE +G+IE +G V L GD V
Sbjct: 33 EVLVKVVATGMCHTDL----IVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHVV 88
Query: 103 LEPGISCWRCDHCKGGRYNLCPEM--------------------------KFFATPPVHG 136
L G C +C C G C E FFA
Sbjct: 89 LSYGY-CGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFA----QS 143
Query: 137 SLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH----ACRRA-NIGPETNVLIMGAG 191
S A + + K+ +V +E + PL G+ AC A + P ++ + GAG
Sbjct: 144 SFATYALSRENNTVKVTKDVPIE---LLGPLGCGIQTGAGACINALKVTPASSFVTWGAG 200
Query: 192 PIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAM 251
+GL +L A+ GA I+ VD+ + RL +AK+LGA +++ T + V I++
Sbjct: 201 AVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQ-----DPVAAIKEIT 255
Query: 252 GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 285
G++ + + G + + + A GK+ +VG
Sbjct: 256 DGGVNFALESTGSPEILKQGVDALGILGKIAVVG 289
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 140/340 (41%), Gaps = 45/340 (13%)
Query: 43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
+V +++ +C +D + T D P ++GHE AG++E VG V + GD V
Sbjct: 35 EVRIKILYTALCHTDAY---TWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHVI 91
Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKF--------------FAT--PPVHGSLANQVVHPA 146
C C CK G+ NLC +++ F+ P++ +
Sbjct: 92 PCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQ- 150
Query: 147 DLCFKLPDNVSLEEGAMCEPLS-VGLHAC----------RRANIGPETNVLIMGAGPIGL 195
+ + +VS+ + PL V L C A + P +NV I G G +GL
Sbjct: 151 ---YTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGL 207
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
GA+ GA RI+ +D+D + AK+ G + V + + I E + + G+
Sbjct: 208 AVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDG---GV 264
Query: 256 DVSFDCAGFNKTMSTALSATRAG-GKVCLVGM---GHHEMTVP--LTPAAVREVDVVGVF 309
D SF+C G M AL G G +VG+ G T P L V + G F
Sbjct: 265 DYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 324
Query: 310 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
+ + P +E + +I V +TH E+ +AF+
Sbjct: 325 KSRTQVPWLVEKYMNKEIKVDEYITHNLTLG--EINKAFD 362
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 144/367 (39%), Gaps = 47/367 (12%)
Query: 21 AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
AW G L I+ E+ ++V +++ A +C +D + TL AD P+++GHE
Sbjct: 13 AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHE 68
Query: 81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
AG++E VG V L GD V C C C + NLC +++ + +
Sbjct: 69 GAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTS 128
Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGL----------------------HACRRAN 178
+ + E + +SV A A
Sbjct: 129 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 188
Query: 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ 238
+ P + + G G +GL ++G + GA RI+ VD++ + + AKE GA + N Q
Sbjct: 189 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI----NPQ 244
Query: 239 DIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP 297
D ++ ++++ M G+D SF+C G K M AL A G +
Sbjct: 245 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGVAASGEE 300
Query: 298 AAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 347
A R +V +K T W P + S KI V VTH F E+ +A
Sbjct: 301 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD--EINKA 358
Query: 348 FETSARG 354
FE G
Sbjct: 359 FELMHSG 365
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 144/367 (39%), Gaps = 47/367 (12%)
Query: 21 AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
AW G L I+ E+ ++V +++ A +C +D + TL AD P+++GHE
Sbjct: 12 AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHE 67
Query: 81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
AG++E VG V L GD V C C C + NLC +++ + +
Sbjct: 68 GAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTS 127
Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVGL----------------------HACRRAN 178
+ + E + +SV A A
Sbjct: 128 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 187
Query: 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ 238
+ P + + G G +GL ++G + GA RI+ VD++ + + AKE GA + N Q
Sbjct: 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI----NPQ 243
Query: 239 DIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP 297
D ++ ++++ M G+D SF+C G K M AL A G +
Sbjct: 244 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGVAASGEE 299
Query: 298 AAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 347
A R +V +K T W P + S KI V VTH F E+ +A
Sbjct: 300 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD--EINKA 357
Query: 348 FETSARG 354
FE G
Sbjct: 358 FELMHSG 364
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 145/367 (39%), Gaps = 47/367 (12%)
Query: 21 AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
AW G L I+ E+ ++V +++ A +C +D + TL AD P+++GHE
Sbjct: 13 AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHE 68
Query: 81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
AG++E VG V L GD V C C C + NLC +++ + +
Sbjct: 69 GAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTS 128
Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVG------------LHAC----------RRAN 178
+ + E + +SV L C A
Sbjct: 129 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 188
Query: 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ 238
+ P + + G G +GL ++G + GA RI+ VD++ + + AKE GA + N Q
Sbjct: 189 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI----NPQ 244
Query: 239 DIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP 297
D ++ ++++ M G+D SF+C G K M AL A G +
Sbjct: 245 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGVAASGEE 300
Query: 298 AAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 347
A R +V +K T W P + S KI V VTH F E+ +A
Sbjct: 301 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD--EINKA 358
Query: 348 FETSARG 354
FE G
Sbjct: 359 FELMHSG 365
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 140/311 (45%), Gaps = 31/311 (9%)
Query: 41 PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE----PMVIGHECAGVIEKVGSEV---- 92
P ++++++KA GICGSDVH +T + P+ +GHE +GV+ + G E
Sbjct: 55 PTEIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRR 114
Query: 93 --KTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCF 150
K G+ V E + C C C G N C + V G+ A V A +
Sbjct: 115 TNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENLNELGFN-VDGAFAEYVKVDAKYAW 173
Query: 151 KLPDNVSLEEG-------AMCEPLSVGLHAC--RRANIGPETNVLIMGAGPIGLVTMLGA 201
L + + EG ++ EP SV +A R I P NV+I+G GPIGL +
Sbjct: 174 SLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAIL 233
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
+ GA ++++ + + R ++AKELGAD+++ + ++ E V + G G + +
Sbjct: 234 KHAGASKVILSEPSEVRRNLAKELGADHVIDPTK--ENFVEAV--LDYTNGLGAKLFLEA 289
Query: 262 AGFNKTMSTALSAT--RAGGKVCLVGM-GHHEMTVPLTPAA--VREVDVVGVFRYK--NT 314
G + + + RA G V + + +PLT VR +VG + T
Sbjct: 290 TGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQGHSGHGT 349
Query: 315 WPLCLELLRSG 325
+P + L SG
Sbjct: 350 FPRVISLXASG 360
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 156/367 (42%), Gaps = 44/367 (11%)
Query: 24 LGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAG 83
L + T+ + P + ++V +++ A GICGSD LK + + F P+++GHE G
Sbjct: 22 LSLETITVAPPK-----AHEVRIKILASGICGSDSSVLKEIIPSKF----PVILGHEAVG 72
Query: 84 VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
V+E +G+ V + PGD+V C C CK N C + A + + ++
Sbjct: 73 VVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT 132
Query: 144 HPADLCFKLPDNVSLEEGAMCEPLSVG-------LHAC--------------RRANIGPE 182
+ L + E + ++V L +C A + P
Sbjct: 133 CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAAVNTAKVTPG 192
Query: 183 TNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE 242
+ + G G +G ++G +A GA RI+ V + A ELGA + N +D +
Sbjct: 193 STCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECL----NPKDYDK 248
Query: 243 EV-EKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLV-GMG---HHEMTVPLTP 297
+ E I + G+D + +CAG +TM AL +T G V +V G+ PL
Sbjct: 249 PIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLL 308
Query: 298 AAVREV--DVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGG 355
R + V G F+ + L + ++ KI+V LV+ + Q + +AFE + G
Sbjct: 309 LTGRSLKGSVFGGFKGEEVSRLVDDYMKK-KINVNFLVSTKLTLDQ--INKAFELLSSGQ 365
Query: 356 TAIKVMF 362
+M
Sbjct: 366 GVRSIMI 372
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 144/367 (39%), Gaps = 47/367 (12%)
Query: 21 AWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHE 80
AW G L I+ E+ ++V +++ A +C +D + TL AD P+++GH
Sbjct: 12 AWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHL 67
Query: 81 CAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLAN 140
AG++E VG V L GD V C C C + NLC +++ + +
Sbjct: 68 GAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTS 127
Query: 141 QVVHPADLCFKLPDNVSLEEGAMCEPLSVG------------LHAC----------RRAN 178
+ + E + +SV L C A
Sbjct: 128 RFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK 187
Query: 179 IGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQ 238
+ P + + G G +GL ++G + GA RI+ VD++ + + AKE GA + N Q
Sbjct: 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI----NPQ 243
Query: 239 DIAEEVEKIQKAMGT-GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP 297
D ++ ++++ M G+D SF+C G K M AL A G +
Sbjct: 244 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSVVVGVAASGEE 299
Query: 298 AAVREVDVVGVFRYKNT----W------PLCLELLRSGKIDVKPLVTHRFGFSQKEVEEA 347
A R +V +K T W P + S KI V VTH F E+ +A
Sbjct: 300 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFD--EINKA 357
Query: 348 FETSARG 354
FE G
Sbjct: 358 FELMHSG 364
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 146/355 (41%), Gaps = 46/355 (12%)
Query: 43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
+V V++ +C +D + T D P V+GHE AG++E VG V + PGD V
Sbjct: 53 EVRVKVLYTALCHTDAY---TWSGKDPEGLFPCVLGHEAAGIVESVGEGVTEVQPGDHVI 109
Query: 103 LEPGISCWRCDHCKGGRYNLCPEMK----------------FFATPPVHGSLANQVVHPA 146
C C CK G+ NLC +++ P++ +
Sbjct: 110 PCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQ- 168
Query: 147 DLCFKLPDNVSLEEGAMCEPL-SVGLHAC----------RRANIGPETNVLIMGAGPIGL 195
+ + +VS+ + PL V L C A + P + V + G G +GL
Sbjct: 169 ---YTVVHDVSVAKIDPVAPLEKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGL 225
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGI 255
GA+A GA RI+ +D+D + AK G + + Q I + + + G+
Sbjct: 226 AVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFINPKEHEQPIQQVIVDLTDG---GV 282
Query: 256 DVSFDCAGFNKTMSTALSATRAG-GKVCLVGM---GHHEMTVP--LTPAAVREVDVVGVF 309
D SF+C G M +AL G G +VG+ G T P L V + G F
Sbjct: 283 DYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGF 342
Query: 310 RYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFETSARGGTAIKVMFNL 364
+ ++ P ++ +I V +TH + ++ +AF+ G ++V+ ++
Sbjct: 343 KSRSQVPSLVDKYLKKEIKVDEYITHNMTLA--DINKAFDL-MHDGDCLRVVLDM 394
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 148/336 (44%), Gaps = 33/336 (9%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
L I+ E+ ++ +++ A G+C +D+++L + D P+V+GHE AG++E V
Sbjct: 21 LVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGF---PVVLGHEGAGIVESV 77
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV----------HGSL 138
G V PG++V C C C+ + N C + +P V G
Sbjct: 78 GPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRK 137
Query: 139 ANQVVHPADLC-FKLPDNVSLEEGAMCEPL-SVGLHAC----------RRANIGPETNVL 186
Q + + + + + +++ + PL +V L C A + P +
Sbjct: 138 VLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCA 197
Query: 187 IMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEK 246
+ G G +GL ++G + GA RI+ VD++ + AK GA + V + + + I++ + K
Sbjct: 198 VFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSK 257
Query: 247 IQKAMGTGIDVSFDCAGFNKTMSTAL-SATRAGGKVCLVGMG--HHEMTVPLTPAAVR-- 301
+ G+D S +C G M AL S + G LVG H T P+ A R
Sbjct: 258 MTNG---GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTW 314
Query: 302 EVDVVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRF 337
+ + G F+ K+ P ++ K+ + +THR
Sbjct: 315 KGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRM 350
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 147/348 (42%), Gaps = 36/348 (10%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ +V +++ A GIC +D H +K V K P+++GHE G++E +
Sbjct: 21 FSIEEIEVAPPKTKEVRIKILATGICRTDDHVIK----GTMVSKFPVIVGHEATGIVESI 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF-----FATPPVHGSLANQVV 143
G V T+ PGD+V C C+ C+ NLC A + + V
Sbjct: 77 GEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPV 136
Query: 144 HPADLCFKLPDNVSLEEGAMCE------PLSVGLHAC----------RRANIGPETNVLI 187
H + ++E ++ + P V L C + + P + ++
Sbjct: 137 HHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVV 196
Query: 188 MGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247
G G +GL ++G ++ GA RI+ +D++ + A +GA + + + I+E + ++
Sbjct: 197 FGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEM 256
Query: 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLTPAAVREVD-- 304
G + +F+ G +TM AL++ G +VG+ + P +
Sbjct: 257 T---GNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTW 313
Query: 305 ---VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
V G + ++ P + + K D+ L+TH F K++ E FE
Sbjct: 314 KGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPF--KKISEGFE 359
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 147/348 (42%), Gaps = 36/348 (10%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
I+ E+ +V +++ A GIC +D H +K V K P+++GHE G++E +
Sbjct: 21 FSIEEIEVAPPKTKEVRIKILATGICRTDDHVIK----GTMVSKFPVIVGHEATGIVESI 76
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKF-----FATPPVHGSLANQVV 143
G V T+ PGD+V C C+ C+ NLC A + + V
Sbjct: 77 GEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPV 136
Query: 144 HPADLCFKLPDNVSLEEGAMCE------PLSVGLHAC----------RRANIGPETNVLI 187
H + ++E ++ + P V L C + + P + ++
Sbjct: 137 HHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVV 196
Query: 188 MGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKI 247
G G +GL ++G ++ GA RI+ +D++ + A +GA + + + I+E + ++
Sbjct: 197 FGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEM 256
Query: 248 QKAMGTGIDVSFDCAGFNKTMSTALSATRAG-GKVCLVGMGHHEMTVPLTPAAVREVD-- 304
G + +F+ G +TM AL++ G +VG+ + P +
Sbjct: 257 T---GNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTW 313
Query: 305 ---VVGVFRYKNTWPLCLELLRSGKIDVKPLVTHRFGFSQKEVEEAFE 349
V G + ++ P + + K D+ L+TH F K++ E FE
Sbjct: 314 KGCVFGGLKSRDDVPKLVTEFLAKKFDLDQLITHVLPF--KKISEGFE 359
>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase
pdb|2DPH|B Chain B, Crystal Structure Of Formaldehyde Dismutase
Length = 398
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 136/307 (44%), Gaps = 47/307 (15%)
Query: 18 NMAAWLLGVNTLKIQPFELPSLG------PYDVLVRMKAVGICGSDVHYLKTLRCADFVV 71
N + G L+++ P L + V++++ + ICGSD H + F+V
Sbjct: 3 NKSVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYR----GRFIV 58
Query: 72 KEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLC------PE 125
+ V+GHE G + + GS+V+ + GD V++ ++C RC +CK R ++C P+
Sbjct: 59 PKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPD 118
Query: 126 MKF----FATPPVHGSLANQVVHP-AD-LCFKLPDNVSLEEGA-----MCEPLSVGLHAC 174
F G A V+ P AD + K D E + + L G H C
Sbjct: 119 ADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC 178
Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVS 234
A + P ++V I GAGP+G GAR GA +++ D + RL + + G + I
Sbjct: 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETI---- 234
Query: 235 TNLQDIAEEVEKIQKAMGT-GIDVSFDCAGF--------------NKTMSTALSATRAGG 279
+L++ A ++I + +G +D D GF N +++ RAGG
Sbjct: 235 -DLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGG 293
Query: 280 KVCLVGM 286
+ + G+
Sbjct: 294 AIGIPGI 300
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 134/305 (43%), Gaps = 26/305 (8%)
Query: 2 GKGGMSQGEKEDGEEVNMAAWLLGVNTLKIQPFELP--SLGPYDVLVRMKAVGICGSDVH 59
G GMS+ +E+ V W + + PF + G DV ++ G+C SD+H
Sbjct: 1 GSHGMSKSPEEE-HPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLH 59
Query: 60 YLKTLRCADF-VVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKG 117
+K D+ P+V GHE G + +VGS+VK + GD+V + + +C C+ C
Sbjct: 60 SIKN----DWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCAN 115
Query: 118 GRYNLCPEMKFFATPPVH------GSLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSV 169
N CP+M H G +N +V + PDN+ L+ GA +C ++V
Sbjct: 116 DLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITV 175
Query: 170 GLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADN 229
P ++ I+G G +G V + A+AFG+ VI + K GAD+
Sbjct: 176 YSPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS 235
Query: 230 IVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHH 289
+ ++ + E++Q A GT +D D + ++ GK+ LVG
Sbjct: 236 FL--------VSRDQEQMQAAAGT-LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEK 286
Query: 290 EMTVP 294
+ +P
Sbjct: 287 PLELP 291
>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase
pdb|1KOL|B Chain B, Crystal Structure Of Formaldehyde Dehydrogenase
Length = 398
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 132/311 (42%), Gaps = 54/311 (17%)
Query: 18 NMAAWLLGVNTLKIQPFELPSLG-------PYDVLVRMKAVGICGSDVHYLKTLRCADFV 70
N LG +++Q + P + + V++++ + ICGSD H ++ A
Sbjct: 3 NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQV- 61
Query: 71 VKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMK--- 127
+V+GHE G + + G +V+ L GD V++ ++C RC CK +C +
Sbjct: 62 ---GLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPAR 118
Query: 128 ------FFATPPVHGSLANQVVHP-ADL-CFKLPDNVSLEEG-----AMCEPLSVGLHAC 174
+ G A V+ P AD KLPD E + + L G H
Sbjct: 119 AGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGA 178
Query: 175 RRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELG---ADNIV 231
A +GP + V + GAGP+GL AR GA +++ D++ RL+ AK G AD +
Sbjct: 179 VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIAD--L 236
Query: 232 KVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCAGFN---------------KTMSTALSAT 275
+ T L E+I +G +D + D GF +++ + T
Sbjct: 237 SLDTPLH------EQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVT 290
Query: 276 RAGGKVCLVGM 286
R GK+ + G+
Sbjct: 291 RVAGKIGIPGL 301
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 132/312 (42%), Gaps = 18/312 (5%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
L I+ +P +VL+R+ G+C +D+ K + A + P+++GHE AG I +V
Sbjct: 16 LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVE-AKQGFRLPIILGHENAGTIVEV 74
Query: 89 GSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADL 148
G E+ + GD V + C +C+ G++N+C G +V +
Sbjct: 75 G-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRW 133
Query: 149 CFKLPDNVSLEEGAMCEPLSVGLHACRRA----NIGPETNVLIMGAGPIGLVTMLGARAF 204
KL +E + + + + A R+A + E V++ G G + + T+ +A
Sbjct: 134 LVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKAL 193
Query: 205 GAPRIVIVDVDDYR--LSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCA 262
I IV + + A ELGAD + + ++D + K+ +G I + D
Sbjct: 194 -MKNITIVGISRSKKHRDFALELGADYV----SEMKDAESLINKLTDGLGASI--AIDLV 246
Query: 263 GFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGV-FRYKNTWPLCLEL 321
G +T G + LVGM +++ AV ++G + N + L
Sbjct: 247 GTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRL 306
Query: 322 LRSGKIDVKPLV 333
SGKI KP +
Sbjct: 307 SESGKI--KPYI 316
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 38/253 (15%)
Query: 38 SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVP 97
S GP V +R A+G+ D ++ + V + P+V+G E A V+E+VG V
Sbjct: 25 SPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTV 84
Query: 98 GDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVS 157
G+RV +C PP+ G+ + + ++PA+ K+P ++
Sbjct: 85 GERVC-----TC---------------------LPPL-GAYSQERLYPAEKLIKVPKDLD 117
Query: 158 LEE----GAMCEPLSVGLHACRRANIGPETNVLI-MGAGPIGLVTMLGARAFGAPRIVIV 212
L++ G M + ++ + + P VLI AG +G + + AR GA I V
Sbjct: 118 LDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTV 177
Query: 213 DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTAL 272
++ + A++LG + + ST QD AE V +I G G+DV +D G T+ +L
Sbjct: 178 STEE-KAETARKLGCHHTINYST--QDFAEVVREITG--GKGVDVVYDSIG-KDTLQKSL 231
Query: 273 SATRAGGKVCLVG 285
R G G
Sbjct: 232 DCLRPRGMCAAYG 244
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 142/335 (42%), Gaps = 26/335 (7%)
Query: 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
+ LK+ +P G +D++VR AV + D L+T D P V + +GV+E
Sbjct: 39 HDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAF--PFVPASDXSGVVE 96
Query: 87 KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-GSLANQVVHP 145
VG V PGDRV IS + G R + H G L+ VV P
Sbjct: 97 AVGKSVTRFRPGDRV-----ISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLP 151
Query: 146 ADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARA 203
P ++ E + C L+ + ++ V++ G G + L + A+A
Sbjct: 152 EGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKA 211
Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT-GIDVSFDCA 262
GA +++ +L A LGAD+ + L++ + VE++ G G D + A
Sbjct: 212 TGA-EVIVTSSSREKLDRAFALGADHGIN---RLEE--DWVERVYALTGDRGADHILEIA 265
Query: 263 GFNKTMSTALSATRAGGKVCLVG-MGHHEMTVPLTPAAVREVDVVGVFRYKNTWPLCLEL 321
G + +L A G++ ++G + E++ P+ P ++ V G+ LE
Sbjct: 266 G-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRR---ALED 321
Query: 322 LRSG--KIDVKPLVTHRFGFSQKEVEEAFETSARG 354
L ++ +KP++ R+ F+ EV EA RG
Sbjct: 322 LVGAVDRLGLKPVIDXRYKFT--EVPEALAHLDRG 354
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 25/243 (10%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE---PMVIGHECAGVI 85
K F ++GP DVL+ + GIC SD+H A KE PM+ GHE AG+I
Sbjct: 17 FKPHDFSRHAVGPRDVLIDILYAGICHSDIH------SAYSEWKEGIYPMIPGHEIAGII 70
Query: 86 EKVGSEVKTLVPGDRVALEPGI-SCWRCDHCKGGRYNLCPEM--------KFFATPPVHG 136
++VG VK GD V + + SC C CK + C ++ F P G
Sbjct: 71 KEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMG 130
Query: 137 SLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIG 194
+N +V + + N LE+ A +C ++ + + + T V + G G +G
Sbjct: 131 GYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITT-YSPLKFSKVTKGTKVGVAGFGGLG 189
Query: 195 LVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG 254
+ + A A GA + + ++++ A +G + T+ + EE++ I + T
Sbjct: 190 SMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY---TDPKQCKEELDFIISTIPTH 245
Query: 255 IDV 257
D+
Sbjct: 246 YDL 248
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 113/264 (42%), Gaps = 39/264 (14%)
Query: 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
G L+ FE + GP V+VR KA+G+ D +Y L A F+ P +G E AGV
Sbjct: 12 GPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFL---PSGLGAEGAGV 68
Query: 85 IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
+E VG EV GDRVA + T P+ G+ + V
Sbjct: 69 VEAVGDEVTRFKVGDRVA--------------------------YGTGPL-GAYSEVHVL 101
Query: 145 PADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLI-MGAGPIGLVTMLGA 201
P KL D+VS E+ A M + L+V + + P +L AG +G + A
Sbjct: 102 PEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWA 161
Query: 202 RAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDC 261
+A GA I V + + + AK LGA + S +D+A+ V ++ G V +D
Sbjct: 162 KALGAKLIGTVSSPE-KAAHAKALGAWETIDYSH--EDVAKRVLELTD--GKKCPVVYDG 216
Query: 262 AGFNKTMSTALSATRAGGKVCLVG 285
G T T+L + G V G
Sbjct: 217 VG-QDTWLTSLDSVAPRGLVVSFG 239
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 116/265 (43%), Gaps = 19/265 (7%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFV--VKEPMVIGHECAGVIE 86
L+ + +P ++L+ +K G+C +D+H D+ VK P+V GHE AGV+
Sbjct: 18 LEYKDIPVPKPKANELLINVKYSGVCHTDLHAWH----GDWPLPVKLPLVGGHEGAGVVV 73
Query: 87 KVGSEVKTLVPGDRVALEP-GISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHP 145
+G VK GD ++ SC C++C+ G + CP GS
Sbjct: 74 GMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTH-DGSFQQYATAD 132
Query: 146 ADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMG-AGPIGLVTMLGAR 202
A +P L + A +C ++V A + AN+ V I G AG +G + + A+
Sbjct: 133 AVQAAHIPQGTDLAQVAPILCAGITV-YKALKSANLMAGHWVAISGAAGGLGSLAVQYAK 191
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTG-IDVSFDC 261
A G R++ +D + + + + +G + + T +DI V K G I+VS
Sbjct: 192 AMGY-RVLGIDGGEGKEELFRSIGGEVFIDF-TKEKDIVGAVLKATDGGAHGVINVSVSE 249
Query: 262 AGFNKTMSTALSATRAGGKVCLVGM 286
A + + RA G LVGM
Sbjct: 250 A----AIEASTRYVRANGTTVLVGM 270
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 135/330 (40%), Gaps = 60/330 (18%)
Query: 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKEPMVIGHECAG 83
G + +K + + +PS+ ++L++ K G V+Y+++ R + ++P V+G E +G
Sbjct: 19 GYDVIKYEDYPVPSISEEELLIKNKYTG-----VNYIESYFRKGIYPCEKPYVLGREASG 73
Query: 84 VIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVV 143
+ G V GD+VA + +Y+ K + PV
Sbjct: 74 TVVAKGKGVTNFEVGDQVAY--------ISNSTFAQYS-----KISSQGPV--------- 111
Query: 144 HPADLCFKLPDNVSLEE-----GAMCEPLSVGLHACRRANIGPETNVLIMGA-GPIGLVT 197
KLP S EE + + L+ ++ VL+ A G +GL+
Sbjct: 112 ------MKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLIL 165
Query: 198 MLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDV 257
+ GA I + D+ +L +AKE GA+ ++ S +DI +V K G G+D
Sbjct: 166 NQLLKMKGAHTIAVASTDE-KLKIAKEYGAEYLINASK--EDILRQVLKFTN--GKGVDA 220
Query: 258 SFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVP------LTPAAVREV--DVVGVF 309
SFD G T +L+A + G V G+ +P L+P + V + G
Sbjct: 221 SFDSVG-KDTFEISLAALKRKG--VFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYI 277
Query: 310 RYKNTWPLCLE----LLRSGKIDVKPLVTH 335
W + L+ S K+++K T+
Sbjct: 278 ADPEEWKYYSDEFFGLVNSKKLNIKIYKTY 307
>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1Q1N|A Chain A, Apo And Holo Structures Of An Nadp(h)-dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|A Chain A, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|B Chain B, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 31/279 (11%)
Query: 42 YDVLVRMKAVGICGSDVHYLKTLRCAD---FVVKEPMVIGHECAGVIEKVGSEVKT-LVP 97
+D+ ++++A G+CGSD+H CA +K P+V+GHE G + K+G + + L
Sbjct: 34 HDIDIKIEACGVCGSDIH------CAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKV 87
Query: 98 GDRVALEPGI-SCWRCDHCKGGRYNLCPEMKFFATPPV------HGSLANQVVHPADLCF 150
G RV + + SC CD CK C + + P G AN V
Sbjct: 88 GQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVV 147
Query: 151 KLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPR 208
+P+N+ A +C L+V R GP V I+G G IG + L ++A GA
Sbjct: 148 PIPENIPSHLAAPLLCGGLTV-YSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAET 206
Query: 209 IVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTM 268
VI R K +GAD+ + EE + +K T D+ CA +
Sbjct: 207 YVISRSSRKREDAMK-MGADHYIAT-------LEEGDWGEKYFDT-FDLIVVCASSLTDI 257
Query: 269 STAL--SATRAGGKVCLVGMGHHEMTVPLTPAAVREVDV 305
+ A + GG++ + + + L P ++ V +
Sbjct: 258 DFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSI 296
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 98/226 (43%), Gaps = 19/226 (8%)
Query: 40 GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGD 99
GP DV + + G+C SD+H +++ P V GHE G + VG +V+ PGD
Sbjct: 46 GPNDVKIEIAYCGVCHSDLHQVRSEWAGTVY---PCVPGHEIVGRVVAVGDQVEKYAPGD 102
Query: 100 RVALEPGI-SCWRCDHCKGGRYNLCPEMK-FFATP----PVH--GSLANQVVHPADLCFK 151
V + + SC C+ C+ G N C M + +P P H G + Q+V +
Sbjct: 103 LVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLR 162
Query: 152 LPDNVSLEEGAMCEPLSVG----LHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAP 207
+ E+ A PL R GP V ++G G +G + + A A GA
Sbjct: 163 I--RHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA- 219
Query: 208 RIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGT 253
+V + + AK LGAD +V S N ++A ++ + T
Sbjct: 220 HVVAFTTSEAKREAAKALGADEVVN-SRNADEMAAHLKSFDFILNT 264
>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily
Protein (np_718042.1) From Shewanella Oneidensis At 1.55
A Resolution
Length = 315
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 29/180 (16%)
Query: 15 EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
E+ + A+ +++ + ++P+L D+LV+ +A+GI D ++K
Sbjct: 3 EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIK---ANPINWSNG 59
Query: 75 MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV 134
V G + AGVI KVG++V + G RVA H R
Sbjct: 60 HVPGVDGAGVIVKVGAKVDSKXLGRRVAY----------HTSLKR--------------- 94
Query: 135 HGSLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGLHACRRANIGPETNVLIMGAGPI 193
HGS A V D LPDN+S E A PL A + + + VLI+G G +
Sbjct: 95 HGSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFGAV 154
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 91/213 (42%), Gaps = 44/213 (20%)
Query: 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIE 86
N K ++P +++LV+++++ + D R D V K P V+G + GV+E
Sbjct: 18 NLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQ----RLMD-VSKAPRVLGFDAIGVVE 72
Query: 87 KVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPA 146
VG+EV GD V + +P +GS A +
Sbjct: 73 SVGNEVTMFNQGDIVY-------------------------YSGSPDQNGSNAEYQLINE 107
Query: 147 DLCFKLPDNVSLEEGAMCEPLS-----------VGLHACRRANIGPETNVLIMGAGPIGL 195
L K P N+S E+ A+ PL+ G+ R N G +T ++I GAG +G
Sbjct: 108 RLVAKAPKNISAEQ-AVSLPLTGITAYETLFDVFGISRNRNENEG-KTLLIINGAGGVGS 165
Query: 196 VTMLGARAFGAPRIVIVDVDDYRLSVAKELGAD 228
+ A+A+G R++ + + K++GAD
Sbjct: 166 IATQIAKAYGL-RVITTASRNETIEWTKKMGAD 197
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 136/342 (39%), Gaps = 52/342 (15%)
Query: 28 TLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY-----LKTL-------RCADFVVKEPM 75
++ + +P LGP + LV + A + + VH L T R +D + +
Sbjct: 57 SIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDL 116
Query: 76 ---VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYN---LCPEMKFF 129
VIG + AGV+ + G V GD V C + +N L PE + +
Sbjct: 117 PYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAH----CLSVELESSDGHNDTMLDPEQRIW 172
Query: 130 ATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR------ANIGPET 183
G LA + ++ PD++S EE A P V A R+ A +
Sbjct: 173 GFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAA--PGLVNSTAYRQLVSRNGAGMKQGD 230
Query: 184 NVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST------- 235
NVLI GA G +G A A GA I +V + + + +GA+ I+ +
Sbjct: 231 NVLIWGASGGLGSYATQFALAGGANPICVVSSPQ-KAEICRAMGAEAIIDRNAEGYRFWK 289
Query: 236 --NLQDIAEEVEKIQKAM-----GTGIDVSFDCAGFNKTMSTALSATRAGGKV--CLVGM 286
N QD +E ++ K + G ID+ F+ G +T ++ TR GG + C
Sbjct: 290 DENTQD-PKEWKRFGKRIRELTGGEDIDIVFEHPG-RETFGASVFVTRKGGTITTCASTS 347
Query: 287 GH-HEMTVPLTPAAVREVDVVGVFRYKNTWPLCLELLRSGKI 327
G+ HE +++ + Y+ W L+ G+I
Sbjct: 348 GYMHEYDNRYLWMSLKRIIGSHFANYREAWE-ANRLIAKGRI 388
>pdb|2B5W|A Chain A, Crystal Structure Of D38c Glucose Dehydrogenase Mutant
From Haloferax Mediterranei
Length = 357
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 112/261 (42%), Gaps = 30/261 (11%)
Query: 43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI----EKVGSEVKTLVPG 98
+ LVR VG+CG+D + ++ +V+GHE GV+ + E +VP
Sbjct: 27 EALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVVVDPNDTELEEGDIVVPT 86
Query: 99 DRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV--HGSLANQVVHPADLCFKLPDNV 156
R G + ++ + + ++ P+ +F V HG ++ P ++P +
Sbjct: 87 VRRPPASGTN----EYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQ 142
Query: 157 SLEEGAMCEPLSVG------LHACRRANIGPETNVLIMGAGPIGLVT--MLGARAFGAPR 208
+ E G + EP+S+ +A R A ++ ++G G +GL+T ML G
Sbjct: 143 A-ELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYEN 201
Query: 209 IVIV---DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFN 265
+ + D D + + +EL A + T ++D+ + E+ +D ++ GF
Sbjct: 202 LYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQ--------MDFIYEATGFP 253
Query: 266 KTMSTALSATRAGGKVCLVGM 286
K ++ A G L+G+
Sbjct: 254 KHAIQSVQALAPNGVGALLGV 274
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 96/240 (40%), Gaps = 41/240 (17%)
Query: 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGV 84
G+N L++ +P ++ +R+KA G+ D+ + D K P+V G EC+G+
Sbjct: 14 GLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQG--NIDNPPKTPLVPGFECSGI 71
Query: 85 IEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVH 144
+E +G VK GDRV + W A V
Sbjct: 72 VEALGDSVKGYEIGDRVMAFVNYNAW----------------------------AEVVCT 103
Query: 145 PADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGAR 202
P + +K+PD++S E A ++ + AN+ +VL+ AG G+ +
Sbjct: 104 PVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGG-GVGQAVAQL 162
Query: 203 AFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDI-AEEVEKIQKAMGTGIDVSFDC 261
P + + A + I T+L D A+ V+++++ G+D+ DC
Sbjct: 163 CSTVPNVTV-------FGTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEGVDIVLDC 215
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 115/281 (40%), Gaps = 49/281 (17%)
Query: 42 YDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIEKVGSEVKTLVPGD 99
+ VL+++ A G+ + + +R + K P G + AGVIE VG GD
Sbjct: 58 HQVLIKVHACGVNPVETY----IRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGD 113
Query: 100 RVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLE 159
RV F + + G A + +KLP+ + +
Sbjct: 114 RV---------------------------FTSSTISGGYAEYALAADHTVYKLPEKLDFK 146
Query: 160 EGAMCE-PLSVGLHA-CRRANIGPETNVLIMGA-GPIGLVTMLGARAFGAPRIVIVDVDD 216
+GA P A A + +VL+ GA G +GL ARA+G + ++
Sbjct: 147 QGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEE 206
Query: 217 YRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMG-TGIDVSFDCAGFNKTMSTALSAT 275
+ V + GA + N +++ ++KI+K +G GID+ + N +S LS
Sbjct: 207 GQKIVLQN-GAHEVF----NHREV-NYIDKIKKYVGEKGIDIIIEMLA-NVNLSKDLSLL 259
Query: 276 RAGGKVCLVGMGHHEMTVPLTP--AAVREVDVVGVFRYKNT 314
GG+V +VG T+ + P +E ++GV + +T
Sbjct: 260 SHGGRVIVVG---SRGTIEINPRDTMAKESSIIGVTLFSST 297
>pdb|2B5V|A Chain A, Crystal Structure Of Glucose Dehydrogenase From Haloferax
Mediterranei
pdb|2VWG|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp, Zn And Gluconolactone.
pdb|2VWH|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp, Zn And Glucose.
pdb|2VWP|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadph And Zn.
pdb|2VWQ|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp And Zn
Length = 357
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 110/259 (42%), Gaps = 26/259 (10%)
Query: 43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV- 101
+ LVR VG+ G+D + ++ +V+GHE GV+ V L GD V
Sbjct: 27 EALVRTLRVGVDGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVV--VDPNDTELEEGDIVV 84
Query: 102 -ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPV--HGSLANQVVHPADLCFKLPDNVSL 158
+ + ++ + + ++ P+ +F V HG ++ P ++P + +
Sbjct: 85 PTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA- 143
Query: 159 EEGAMCEPLSVG------LHACRRANIGPETNVLIMGAGPIGLVT--MLGARAFGAPRIV 210
E G + EP+S+ +A R A ++ ++G G +GL+T ML G +
Sbjct: 144 ELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLY 203
Query: 211 IV---DVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKT 267
+ D D + + +EL A + T ++D+ + E+ +D ++ GF K
Sbjct: 204 CLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQ--------MDFIYEATGFPKH 255
Query: 268 MSTALSATRAGGKVCLVGM 286
++ A G L+G+
Sbjct: 256 AIQSVQALAPNGVGALLGV 274
>pdb|2CD9|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CD9|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form
pdb|2CDA|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
pdb|2CDA|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp
Length = 366
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 103/264 (39%), Gaps = 45/264 (17%)
Query: 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY------LKTL-RCADFVVKEPMVI 77
GV + +L S G + +R GICG+D L TL + DF +V+
Sbjct: 12 GVQVKDVDEKKLDSYGK--IKIRTIYNGICGTDREIVNGKLTLSTLPKGKDF-----LVL 64
Query: 78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-- 135
GHE GV+E+ GD V C C +C GR + C E F +H
Sbjct: 65 GHEAIGVVEE---SYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFC-ETGEFGEAGIHKM 120
Query: 136 -GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS---------------VGLHACRRANI 179
G + K+P ++ + G + +PL+ V + C +
Sbjct: 121 DGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTL 179
Query: 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD 239
VL++G GPIG++ L R +G ++V E+ I + TN +
Sbjct: 180 NCR-KVLVVGTGPIGVLFTLLFRTYG------LEVWMANRREPTEVEQTVIEETKTNYYN 232
Query: 240 IAEEVEKIQKAMGTGIDVSFDCAG 263
+ +K++ ++G DV D G
Sbjct: 233 SSNGYDKLKDSVGK-FDVIIDATG 255
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 88/224 (39%), Gaps = 38/224 (16%)
Query: 43 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVA 102
++ V KA+GI D + L + P +G E AG++ KVGS VK + GDRV
Sbjct: 30 EIQVENKAIGINFIDTYIRSGLYPPPSL---PSGLGTEAAGIVSKVGSGVKHIKAGDRV- 85
Query: 103 LEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA 162
+ + A VH + AD LP +S E+ A
Sbjct: 86 -------------------VYAQSALGAYSSVHNII-------ADKAAILPAAISFEQAA 119
Query: 163 --MCEPLSVGLHACRRANIGPETNVLI-MGAGPIGLVTMLGARAFGAPRIVIVDVDDYRL 219
+ L+V + I P+ L AG +GL+ A+A GA I V
Sbjct: 120 ASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ 179
Query: 220 SVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263
S K GA ++ +D+ E +++I G + V +D G
Sbjct: 180 SALKA-GAWQVINYRE--EDLVERLKEITG--GKKVRVVYDSVG 218
>pdb|2CDB|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDB|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Glucose
pdb|2CDC|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|B Chain B, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|C Chain C, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
pdb|2CDC|D Chain D, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex
With Nadp And Xylose
Length = 366
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 103/264 (39%), Gaps = 45/264 (17%)
Query: 25 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHY------LKTL-RCADFVVKEPMVI 77
GV + +L S G + +R GICG+D L TL + DF +V+
Sbjct: 12 GVQVKDVDEKKLDSYGK--IKIRTIYNGICGADREIVNGKLTLSTLPKGKDF-----LVL 64
Query: 78 GHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-- 135
GHE GV+E+ GD V C C +C GR + C E F +H
Sbjct: 65 GHEAIGVVEE---SYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFC-ETGEFGEAGIHKM 120
Query: 136 -GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLS---------------VGLHACRRANI 179
G + K+P ++ + G + +PL+ V + C +
Sbjct: 121 DGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTL 179
Query: 180 GPETNVLIMGAGPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQD 239
VL++G GPIG++ L R +G ++V E+ I + TN +
Sbjct: 180 NCR-KVLVVGTGPIGVLFTLLFRTYG------LEVWMANRREPTEVEQTVIEETKTNYYN 232
Query: 240 IAEEVEKIQKAMGTGIDVSFDCAG 263
+ +K++ ++G DV D G
Sbjct: 233 SSNGYDKLKDSVGK-FDVIIDATG 255
>pdb|1H0K|A Chain A, Enoyl Thioester Reductase 2
pdb|1H0K|B Chain B, Enoyl Thioester Reductase 2
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 118/317 (37%), Gaps = 45/317 (14%)
Query: 29 LKIQPFELP--SLGPYDVLVRMKAVGICGSDVHYL------KTLRCADFVVKEPMV-IGH 79
L Q FE+ +L P +V+V+ I SD++ + K + F EP G+
Sbjct: 19 LFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKTTGFGTAEPAAPCGN 78
Query: 80 ECAGVIEKVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
E + KVGS V +L GD V WR H G + F P S
Sbjct: 79 EGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRT-HALGN------DDDFIKLPNPAQSK 131
Query: 139 ANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETNVLIM--GAGPIG 194
AN P+ +++ +GA PL+ L + P + I G +G
Sbjct: 132 AN----------GKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVG 181
Query: 195 LVTMLGARAFGAPRIVIV----DVDDYRLSVAKELGADNIV-KVSTNLQDIAEEVEKIQK 249
+ I ++ ++D+ S+ KELGA ++ + N ++ +++ K
Sbjct: 182 KYASQIGKLLNFNSISVIRDRPNLDEVVASL-KELGATQVITEDQNNSKEFGPTIKEWIK 240
Query: 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF 309
G ++ +C G + A G + GM +T+P + + G +
Sbjct: 241 QSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFW 300
Query: 310 RYKNTWPLCLELLRSGK 326
ELL++ K
Sbjct: 301 --------VTELLKNNK 309
>pdb|1N9G|A Chain A, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|C Chain C, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|F Chain F, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 118/317 (37%), Gaps = 45/317 (14%)
Query: 29 LKIQPFELP--SLGPYDVLVRMKAVGICGSDVHYL------KTLRCADFVVKEPMV-IGH 79
L Q FE+ +L P +V+V+ I SD++ + K + F EP G+
Sbjct: 41 LFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKTTGFGTAEPAAPCGN 100
Query: 80 ECAGVIEKVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
E + KVGS V +L GD V WR H G + F P S
Sbjct: 101 EGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRT-HALGN------DDDFIKLPNPAQSK 153
Query: 139 ANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETNVLIM--GAGPIG 194
AN P+ +++ +GA PL+ L + P + I G +G
Sbjct: 154 AN----------GKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVG 203
Query: 195 LVTMLGARAFGAPRIVIV----DVDDYRLSVAKELGADNIV-KVSTNLQDIAEEVEKIQK 249
+ I ++ ++D+ S+ KELGA ++ + N ++ +++ K
Sbjct: 204 KYASQIGKLLNFNSISVIRDRPNLDEVVASL-KELGATQVITEDQNNSKEFGPTIKEWIK 262
Query: 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF 309
G ++ +C G + A G + GM +T+P + + G +
Sbjct: 263 QSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFW 322
Query: 310 RYKNTWPLCLELLRSGK 326
ELL++ K
Sbjct: 323 --------VTELLKNNK 331
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 116/293 (39%), Gaps = 38/293 (12%)
Query: 27 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDV-----------HYLK-TLRCADFVVKEP 74
+L++ +P L P +VLV + A I + V H+LK R + +
Sbjct: 48 KSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHD 107
Query: 75 M---VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFAT 131
V+G +C+GV+ + G V+ PGD V + P + G L E + +
Sbjct: 108 QPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPA-HVDEQEPATHGDGMLGTEQRAWGF 166
Query: 132 PPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVG-----LHACRRANIGPETNVL 186
G LA V A P +++ EE A+ PL G L + R A + VL
Sbjct: 167 ETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVS-PLCAGTAYRMLVSDRGAQMKQGDIVL 225
Query: 187 IMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVK---------VSTN 236
I GA G +G + + G + +V +V + LG D ++ ++ +
Sbjct: 226 IWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RALGCDLVINRAELGITDDIADD 284
Query: 237 LQDIAEEVEKIQKAM----GTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 285
+ + E K+ K + G D+ F+ G T ++ R GG V G
Sbjct: 285 PRRVVETGRKLAKLVVEKAGREPDIVFEHTG-RVTFGLSVIVARRGGTVVTCG 336
>pdb|1GU7|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GU7|B Chain B, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GUF|A Chain A, Enoyl Thioester Reductase From Candida Tropicalis
pdb|1GUF|B Chain B, Enoyl Thioester Reductase From Candida Tropicalis
Length = 364
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 118/317 (37%), Gaps = 45/317 (14%)
Query: 29 LKIQPFELP--SLGPYDVLVRMKAVGICGSDVHYL------KTLRCADFVVKEPMV-IGH 79
L Q FE+ +L P +V+V+ + SD++ + K + F EP G+
Sbjct: 19 LFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGN 78
Query: 80 ECAGVIEKVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
E + KVGS V +L GD V WR H G + F P S
Sbjct: 79 EGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRT-HALGN------DDDFIKLPNPAQSK 131
Query: 139 ANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETNVLIM--GAGPIG 194
AN P+ +++ +GA PL+ L + P + I G +G
Sbjct: 132 AN----------GKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVG 181
Query: 195 LVTMLGARAFGAPRIVIV----DVDDYRLSVAKELGADNIV-KVSTNLQDIAEEVEKIQK 249
+ I ++ ++D+ S+ KELGA ++ + N ++ +++ K
Sbjct: 182 KYASQIGKLLNFNSISVIRDRPNLDEVVASL-KELGATQVITEDQNNSREFGPTIKEWIK 240
Query: 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF 309
G ++ +C G + A G + GM +T+P + + G +
Sbjct: 241 QSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFW 300
Query: 310 RYKNTWPLCLELLRSGK 326
ELL++ K
Sbjct: 301 --------VTELLKNNK 309
>pdb|1GYR|A Chain A, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
pdb|1GYR|B Chain B, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
pdb|1GYR|C Chain C, Mutant Form Of Enoyl Thioester Reductase From Candida
Tropicalis
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 118/317 (37%), Gaps = 45/317 (14%)
Query: 29 LKIQPFELP--SLGPYDVLVRMKAVGICGSDVHYL------KTLRCADFVVKEPMV-IGH 79
L Q FE+ +L P +V+V+ + SD++ + K + F EP G+
Sbjct: 19 LFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVNPSKPAKTTGFGTTEPAAPCGN 78
Query: 80 ECAGVIEKVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
E + KVGS V +L GD V WR H G + F P S
Sbjct: 79 EGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRT-HALGN------DDDFIKLPNPAQSK 131
Query: 139 ANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETNVLIM--GAGPIG 194
AN P+ +++ +GA PL+ L + P + I G +G
Sbjct: 132 AN----------GKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVG 181
Query: 195 LVTMLGARAFGAPRIVIV----DVDDYRLSVAKELGADNIV-KVSTNLQDIAEEVEKIQK 249
+ I ++ ++D+ S+ KELGA ++ + N ++ +++ K
Sbjct: 182 KYASQIGKLLNFNSISVIRDRPNLDEVVASL-KELGATQVITEDQNNSREFGPTIKEWIK 240
Query: 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF 309
G ++ +C G + A G + GM +T+P + + G +
Sbjct: 241 QSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFW 300
Query: 310 RYKNTWPLCLELLRSGK 326
ELL++ K
Sbjct: 301 --------VTELLKNNK 309
>pdb|1N9G|B Chain B, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|D Chain D, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
pdb|1N9G|E Chain E, Mitochondrial 2-enoyl Thioester Reductase Etr1p/etr2p
Heterodimer From Candida Tropicalis
Length = 386
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 118/317 (37%), Gaps = 45/317 (14%)
Query: 29 LKIQPFELP--SLGPYDVLVRMKAVGICGSDVHYL------KTLRCADFVVKEPMV-IGH 79
L Q FE+ +L P +V+V+ + SD++ + K + F EP G+
Sbjct: 41 LFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGN 100
Query: 80 ECAGVIEKVGSEVKTLVPGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSL 138
E + KVGS V +L GD V WR H G + F P S
Sbjct: 101 EGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRT-HALGN------DDDFIKLPNPAQSK 153
Query: 139 ANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGLHACRRANIGPETNVLIM--GAGPIG 194
AN P+ +++ +GA PL+ L + P + I G +G
Sbjct: 154 AN----------GKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVG 203
Query: 195 LVTMLGARAFGAPRIVIV----DVDDYRLSVAKELGADNIV-KVSTNLQDIAEEVEKIQK 249
+ I ++ ++D+ S+ KELGA ++ + N ++ +++ K
Sbjct: 204 KYASQIGKLLNFNSISVIRDRPNLDEVVASL-KELGATQVITEDQNNSREFGPTIKEWIK 262
Query: 250 AMGTGIDVSFDCAGFNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF 309
G ++ +C G + A G + GM +T+P + + G +
Sbjct: 263 QSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFW 322
Query: 310 RYKNTWPLCLELLRSGK 326
ELL++ K
Sbjct: 323 --------VTELLKNNK 331
>pdb|4EYE|A Chain A, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
pdb|4EYE|B Chain B, Crystal Structure Of A Probable Oxidoreductase From
Mycobacterium Abscessus Solved By Iodide Ion Sad
Length = 342
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 20 AAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGH 79
A L G L E P GP V+V +KA G+C D YL T ++ P V G
Sbjct: 27 AQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPD--YLMTKGEYQLKMEPPFVPGI 84
Query: 80 ECAGVIEKV--GSEVKTLVPGDRV 101
E AGV+ GS +K PGDRV
Sbjct: 85 ETAGVVRSAPEGSGIK---PGDRV 105
>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases, Atcad5
pdb|2CF6|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol
Dehydrogenases Atcad5
Length = 357
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 116/274 (42%), Gaps = 24/274 (8%)
Query: 34 FELPSLGPYDVLVRMKAVGICGSDVHYLKT-LRCADFVVKEPMVIGHECAGVIEKVGSEV 92
+ L GP DV +R+ GIC +D+H K L +++ PMV GHE G + +VGS+V
Sbjct: 27 YTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNY----PMVPGHEVVGEVVEVGSDV 82
Query: 93 KTLVPGD-RVALEPGISCWRCDHCKGGRYNLCPEM------KFFATPPVHGSLANQVVHP 145
GD C C C+ CP+ + P G A V
Sbjct: 83 SKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVH 142
Query: 146 ADLCFKLPDNVSLEEGA--MCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARA 203
K+P+ +++E+ A +C ++V P I+G G +G + + A+A
Sbjct: 143 QKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKA 202
Query: 204 FGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAG 263
G VI + R ++LGAD+ V I + K+ + + +D D
Sbjct: 203 MGHHVTVISSSNKKREEALQDLGADDYV--------IGSDQAKMSE-LADSLDYVIDTVP 253
Query: 264 FNKTMSTALSATRAGGKVCLVGMGHHEMTVPLTP 297
+ + LS + GK+ L+G+ ++ + LTP
Sbjct: 254 VHHALEPYLSLLKLDGKLILMGVINNPLQF-LTP 286
>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
pdb|4DVJ|B Chain B, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
Length = 363
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 34 FELPSLGP--YDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE 91
ELP P +D+LV +KAV + D K R + VIG++ AG++ VG +
Sbjct: 43 IELPKPAPAGHDILVEVKAVSVNPVD---YKVRRSTPPDGTDWKVIGYDAAGIVSAVGPD 99
Query: 92 VKTLVPGDRV 101
V PGD V
Sbjct: 100 VTLFRPGDEV 109
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 94/231 (40%), Gaps = 33/231 (14%)
Query: 76 VIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYN---LCPEMKFFATP 132
+IG + AGV+ + G V PGD V C + ++ L PE + +
Sbjct: 138 IIGSDLAGVVLRTGPGVNAWQPGDEVVAH----CLSVELESPDGHDDTMLDPEQRIWGFE 193
Query: 133 PVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRR------ANIGPETNVL 186
G LA + + P +++ EE A P V A R+ A + NVL
Sbjct: 194 TNFGGLAEIALVKTNQLMPKPKHLTWEEAAA--PGLVNSTAYRQLVSRNGAAMKQGDNVL 251
Query: 187 IMGA-GPIGLVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVST---------N 236
I GA G +G A A GA I +V + + + +GA+ I+ + +
Sbjct: 252 IWGASGGLGSYATQFALAGGANPICVVSSPQ-KAEICRSMGAEAIIDRNAEGYKFWKDEH 310
Query: 237 LQDIAEEVEKIQKAM-----GTGIDVSFDCAGFNKTMSTALSATRAGGKVC 282
QD +E ++ K + G ID+ F+ G +T ++ TR GG +
Sbjct: 311 TQD-PKEWKRFGKRIRELTGGEDIDIVFEHPG-RETFGASVYVTRKGGTIT 359
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 16/99 (16%)
Query: 68 DFVVKEPMVIGHECAGVIEK-VGSEVKTLVPGDRVALEPGISCW---RCDHCKGGRYNLC 123
DF V+ E G++EK +G E ++ G+RV E I W R D G
Sbjct: 13 DFTVEANRKAFEEALGLVEKELGKEYPLIINGERVTTEDKIQSWNPARKDQLVG------ 66
Query: 124 PEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA 162
+ + LA + + AD F+ NV+ EE A
Sbjct: 67 ------SVSKANQDLAEKAIQSADEAFQTWRNVNPEERA 99
>pdb|3PI7|A Chain A, Crystal Structure Of A Putative Nadph:quinone Reductase
(Mll3093) From Mesorhizobium Loti At 1.71 A Resolution
Length = 349
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 36 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE--VK 93
+P+ GP VL+++ I SDV ++K V P G E G I G E K
Sbjct: 44 VPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPA--GFEGVGTIVAGGDEPYAK 101
Query: 94 TLVPGDRVALEPGISCW 110
+LV G RVA G+S W
Sbjct: 102 SLV-GKRVAFATGLSNW 117
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 104/281 (37%), Gaps = 49/281 (17%)
Query: 37 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
P P VLV+++A G D ++ P ++G + AG + VG EV +
Sbjct: 28 PQPAPGQVLVQIEASGTNPLDAK-IRAGEAPHAQQPLPAILGXDLAGTVVAVGPEVDSFR 86
Query: 97 PGDRV-ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDN 155
GD V L G+ + H + + + A+ P + V P L F
Sbjct: 87 VGDAVFGLTGGVGGLQGTHAQ----FAAVDARLLASKPAALTXRQASVLP--LVF----- 135
Query: 156 VSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAG------PIGLVTMLGARAFGAPRI 209
++ EG + RA + VLI G G I + GAR F R
Sbjct: 136 ITAWEGLV-----------DRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATAR- 183
Query: 210 VIVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMS 269
L ++LGA I S +D A E G G D+ +D G +
Sbjct: 184 ------GSDLEYVRDLGATPI-DASREPEDYAAE-----HTAGQGFDLVYDTLG-GPVLD 230
Query: 270 TALSAT-RAGGKVCLVGMGHHEMTVPLTPAAVREVDVVGVF 309
+ SA R G V +G G H+ L P + ++ GVF
Sbjct: 231 ASFSAVKRFGHVVSCLGWGTHK----LAPLSFKQATYSGVF 267
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 34.7 bits (78), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
++++ EL ++ DV V+M A I SD++ ++ + + P V G+E + V
Sbjct: 42 VELKNLELAAVRGSDVRVKMLAAPINPSDINMIQG--NYGLLPELPAVGGNEGVAQVVAV 99
Query: 89 GSEVKTLVPGDRV-ALEPGISCWRCD 113
GS V L PGD V G+ WR +
Sbjct: 100 GSNVTGLKPGDWVIPANAGLGTWRTE 125
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 29 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKV 88
++++ EL ++ DV V+M A I SD++ ++ + + P V G+E + V
Sbjct: 29 VELKNLELAAVRGSDVRVKMLAAPINPSDINMIQG--NYGLLPELPAVGGNEGVAQVVAV 86
Query: 89 GSEVKTLVPGDRV-ALEPGISCWRCD 113
GS V L PGD V G+ WR +
Sbjct: 87 GSNVTGLKPGDWVIPANAGLGTWRTE 112
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 15/111 (13%)
Query: 104 EPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAM 163
E G +R DH + Y +C + F +N++ H DL P+N+ +
Sbjct: 109 ENGFLPFRLDHIRKMAYQICKSVNFLH--------SNKLTH-TDL---KPENILFVQSDY 156
Query: 164 CEPLSVGLHACRRANIGPETNVLIMGAGPIG---LVTMLGARAFGAPRIVI 211
E + + R I P+ V+ G+ T++ R + AP +++
Sbjct: 157 TEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVIL 207
>pdb|3GQV|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Mutant K54s
With Bound Nadp
Length = 371
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 26/126 (20%)
Query: 37 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
P L V VR++AV I SD ++R F +G + AG + VGS+V +
Sbjct: 32 PMLPRDQVYVRVEAVAINPSDT----SMR-GQFATPW-AFLGTDYAGTVVAVGSDVTHIQ 85
Query: 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV 156
GDRV G + +CP P G+ + V + K+P +
Sbjct: 86 VGDRV--------------YGAQNEMCPRT------PDQGAFSQYTVTRGRVWAKIPKGL 125
Query: 157 SLEEGA 162
S E+ A
Sbjct: 126 SFEQAA 131
>pdb|3B6Z|A Chain A, Lovastatin Polyketide Enoyl Reductase (Lovc) Complexed
With 2'- Phosphoadenosyl Isomer Of Crotonoyl-Coa
pdb|3B70|A Chain A, Crystal Structure Of Aspergillus Terreus Trans-Acting
Lovastatin Polyketide Enoyl Reductase (Lovc) With Bound
Nadp
Length = 371
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 26/126 (20%)
Query: 37 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLV 96
P L V VR++AV I SD T F +G + AG + VGS+V +
Sbjct: 32 PMLPRDQVYVRVEAVAINPSD-----TKMRGQFATPW-AFLGTDYAGTVVAVGSDVTHIQ 85
Query: 97 PGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNV 156
GDRV G + +CP P G+ + V + K+P +
Sbjct: 86 VGDRV--------------YGAQNEMCPRT------PDQGAFSQYTVTRGRVWAKIPKGL 125
Query: 157 SLEEGA 162
S E+ A
Sbjct: 126 SFEQAA 131
>pdb|3CER|A Chain A, Crystal Structure Of The Exopolyphosphatase-Like Protein
Q8g5j2. Northeast Structural Genomics Consortium Target
Blr13
pdb|3CER|B Chain B, Crystal Structure Of The Exopolyphosphatase-Like Protein
Q8g5j2. Northeast Structural Genomics Consortium Target
Blr13
pdb|3CER|C Chain C, Crystal Structure Of The Exopolyphosphatase-Like Protein
Q8g5j2. Northeast Structural Genomics Consortium Target
Blr13
pdb|3CER|D Chain D, Crystal Structure Of The Exopolyphosphatase-Like Protein
Q8g5j2. Northeast Structural Genomics Consortium Target
Blr13
pdb|3CER|E Chain E, Crystal Structure Of The Exopolyphosphatase-Like Protein
Q8g5j2. Northeast Structural Genomics Consortium Target
Blr13
Length = 343
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 15 EEVNMAAWLLGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEP 74
E V +A G N+++++ + + G ++V+ R+ V G DV KT R AD ++
Sbjct: 14 ESVTVAGIDCGTNSIRLKIARVDADGXHEVVPRILRVIRLGQDVD--KTHRFADEALERA 71
Query: 75 MVIGHECAGVI 85
V E AGVI
Sbjct: 72 YVAAREFAGVI 82
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 33 PFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG 89
P LP G D+LVR + VG+ SD++Y + D VK P IG E G + +G
Sbjct: 55 PVPLPGDG--DLLVRNRFVGVNASDINY--SAGRYDPSVKPPFDIGFEGIGEVVALG 107
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 33 PFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG 89
P LP G D+LVR + VG+ SD++Y + D VK P IG E G + +G
Sbjct: 47 PVPLPGDG--DLLVRNRFVGVNASDINY--SAGRYDPSVKPPFDIGFEGIGEVVALG 99
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 33 PFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVG 89
P LP G D+LVR + VG+ SD++Y + D VK P IG E G + +G
Sbjct: 26 PVPLPGDG--DLLVRNRFVGVNASDINY--SAGRYDPSVKPPFDIGFEGIGEVVALG 78
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 32 QPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSE 91
+P LG +V + M+A G+ D L L V +G E AGV+ + G
Sbjct: 229 EPTATAPLGDGEVRIAMRAAGVNFRDA--LIALGMYPGVAS----LGSEGAGVVVETGPG 282
Query: 92 VKTLVPGDRV 101
V L PGDRV
Sbjct: 283 VTGLAPGDRV 292
>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1Y9E|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
Length = 330
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 116/296 (39%), Gaps = 56/296 (18%)
Query: 26 VNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVI 85
V+ I +LP G VL+++ GI D L + V + P+++G + AG +
Sbjct: 19 VHVKTISTEDLPKDG---VLIKVAYSGINYKD--GLAGKAGGNIVREYPLILGIDAAGTV 73
Query: 86 EKVGSEVKTLVPGDRV---ALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQV 142
V S GD V + E G+S G L+
Sbjct: 74 --VSSNDPRFAEGDEVIATSYELGVSR-------------------------DGGLSEYA 106
Query: 143 VHPADLCFKLPDNVSLEE----GAMCEPLSVGLHACRRANIGPETNVLI----MGAGPIG 194
P D LP N+SL+E G ++ +H + + PE ++ G
Sbjct: 107 SVPGDWLVPLPQNLSLKEAXVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGI 166
Query: 195 LVTMLGARAFGAPRIVIVDVDDYRLSVAKELGADNIVKVSTNLQDIAE-EVEKIQKAMGT 253
V+ L R + +V + K+LGA ++ + +D+ + ++ + K
Sbjct: 167 AVSXLNKRGY---DVVASTGNREAADYLKQLGASEVI----SREDVYDGTLKALSKQQWQ 219
Query: 254 GIDVSFDCAGFNKTMSTALSATRAGGKVCLVGM-GHHEMTVPLTPAAVREVDVVGV 308
G + D G K +++ LS + GG V + G+ G E+ + P +R V ++G+
Sbjct: 220 G---AVDPVG-GKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGI 271
>pdb|1ZB7|A Chain A, Crystal Structure Of Botulinum Neurotoxin Type G Light
Chain
Length = 455
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 232 KVSTNLQDIAEEVEKIQKAMGTGIDVS 258
K N QDIA + + A G+GID+S
Sbjct: 291 KALQNFQDIANRLNIVSSAQGSGIDIS 317
>pdb|1MZJ|A Chain A, Crystal Structure Of The Priming Beta-Ketosynthase From
The R1128 Polyketide Biosynthetic Pathway
pdb|1MZJ|B Chain B, Crystal Structure Of The Priming Beta-Ketosynthase From
The R1128 Polyketide Biosynthetic Pathway
Length = 339
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 22/74 (29%)
Query: 219 LSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMSTALSATRAG 278
+++A ELGADN G D+S CAGF +S A A +G
Sbjct: 101 VAIAHELGADN----------------------AGGFDLSAACAGFCHALSIAADAVESG 138
Query: 279 GKVCLVGMGHHEMT 292
G ++ + MT
Sbjct: 139 GSRHVLVVATERMT 152
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 28.9 bits (63), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 114/326 (34%), Gaps = 67/326 (20%)
Query: 36 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPM--VIGHECAGVIEKVGSEVK 93
LP G +VLVR +A+G+ D+ R + + ++G E +G I VG V
Sbjct: 50 LPVAGEGEVLVRAEAIGVNRPDI----AQRQGSYPPPKDASPILGLELSGEIVGVGPGVS 105
Query: 94 TLVPGDRVALEPGISCWRCDHCKGGRYN---LCPEMKFFATPPVHGSLANQVVHPADLCF 150
GD+V C GG Y L P + P G A + + F
Sbjct: 106 GYAVGDKV----------CGLANGGAYAEYCLLPAGQILPFP--KGYDAVKAAALPETFF 153
Query: 151 KLPDNVSLEEGAMCEPLSVGLHACRRANIGPETNVLIMGAGPIGLVTMLGARAFGAPRIV 210
+ N+ + + E SV +H G IG + ARAFGA +
Sbjct: 154 TVWANL-FQXAGLTEGESVLIHG---------------GTSGIGTTAIQLARAFGA-EVY 196
Query: 211 IVDVDDYRLSVAKELGADNIVKVSTNLQDIAEEVEKIQKAMGTGIDVSFDCAGFNKTMST 270
+ + LGA + + +D A I+ G G+D+ D G
Sbjct: 197 ATAGSTGKCEACERLGAKRGINYRS--EDFA---AVIKAETGQGVDIILDXIGAAYFERN 251
Query: 271 ALSATRAG--GKVCLVGMGHHEMTVPLTPAAVREVDVVGVFRYKNT-------------- 314
S + G + +G G V L+P V+ + V G T
Sbjct: 252 IASLAKDGCLSIIAFLG-GAVAEKVNLSPIXVKRLTVTGSTXRPRTAEEKRAIRDDLLSE 310
Query: 315 -WPLCLELLRSGKIDVKPLVTHRFGF 339
WP LL +G V P++ F F
Sbjct: 311 VWP----LLEAGT--VAPVIHKVFAF 330
>pdb|3ZQ4|A Chain A, Unusual, Dual Endo- And Exo-Nuclease Activity In The
Degradosome Explained By Crystal Structure Analysis Of
Rnase J1
pdb|3ZQ4|C Chain C, Unusual, Dual Endo- And Exo-Nuclease Activity In The
Degradosome Explained By Crystal Structure Analysis Of
Rnase J1
pdb|3ZQ4|D Chain D, Unusual, Dual Endo- And Exo-Nuclease Activity In The
Degradosome Explained By Crystal Structure Analysis Of
Rnase J1
pdb|3ZQ4|E Chain E, Unusual, Dual Endo- And Exo-Nuclease Activity In The
Degradosome Explained By Crystal Structure Analysis Of
Rnase J1
Length = 555
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 30/144 (20%)
Query: 127 KFFATPPVHGSLANQVVH---------PADLCFKLPDNVSLEEGAMCEPLSVGLHACRRA 177
KFF P+HG Q +H P + CF + DN E L++ A
Sbjct: 384 KFFM--PIHGEYRMQKMHVKLATDCGIPEENCFIM-DN--------GEVLALKGDEASVA 432
Query: 178 NIGPETNVLIMGAG--PIGLVTMLGARAFGAPRIVIV----DVDDYRLSVAKELGADNIV 231
P +V I G+G IG + + R +VIV D+DD+++S +L + V
Sbjct: 433 GKIPSGSVYIDGSGIGDIGNIVLRDRRILSEEGLVIVVVSIDMDDFKISAGPDLISRGFV 492
Query: 232 --KVSTNLQDIAEEV--EKIQKAM 251
+ S +L + A+E+ +QK M
Sbjct: 493 YMRESGDLINDAQELISNHLQKVM 516
>pdb|2AHB|A Chain A, X-Ray Crystal Structure Of R46a,R161a Mutant Of
Mycobacterium Tuberculosis Fabh
pdb|2AHB|B Chain B, X-Ray Crystal Structure Of R46a,R161a Mutant Of
Mycobacterium Tuberculosis Fabh
Length = 356
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 230 IVKVSTNLQDIAEEVEKIQKAMGT----GIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 285
IV +T+ + ++G G D+S CAGF + A R GG ++
Sbjct: 108 IVTTNTHFLQTPPAAPMVAASLGAKGILGFDLSAGCAGFGYALGAAADMIRGGGAATMLV 167
Query: 286 MGHHEMT 292
+G +++
Sbjct: 168 VGTEKLS 174
>pdb|2QNY|A Chain A, Crystal Structure Of The Complex Between The A246f Mutant
Of Mycobacterium Beta-Ketoacyl-Acyl Carrier Protein
Synthase Iii (Fabh) And Ss-(2-Hydroxyethyl) O-Decyl
Ester Carbono(Dithioperoxoic) Acid
pdb|2QNY|B Chain B, Crystal Structure Of The Complex Between The A246f Mutant
Of Mycobacterium Beta-Ketoacyl-Acyl Carrier Protein
Synthase Iii (Fabh) And Ss-(2-Hydroxyethyl) O-Decyl
Ester Carbono(Dithioperoxoic) Acid
pdb|2QO0|A Chain A, Crystal Structure Of The Complex Between The A246f Mutant
Of Mycobacterium Beta-Ketoacyl-Acyl Carrier Protein
Synthase Iii (Fabh) And 11-(Decyldithiocarbonyloxy)-
Undecanoic Acid
pdb|2QO0|B Chain B, Crystal Structure Of The Complex Between The A246f Mutant
Of Mycobacterium Beta-Ketoacyl-Acyl Carrier Protein
Synthase Iii (Fabh) And 11-(Decyldithiocarbonyloxy)-
Undecanoic Acid
Length = 335
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 230 IVKVSTNLQDIAEEVEKIQKAMGT----GIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 285
IV +T+ + ++G G D+S CAGF + A R GG ++
Sbjct: 87 IVTTNTHFLQTPPAAPMVAASLGAKGILGFDLSAGCAGFGYALGAAADMIRGGGAATMLV 146
Query: 286 MGHHEMT 292
+G +++
Sbjct: 147 VGTEKLS 153
>pdb|1M1M|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis
Beta- Ketoacyl-Acyl Carrier Protein Synthase Iii
(Mtfabh)
pdb|1M1M|B Chain B, X-Ray Crystal Structure Of Mycobacterium Tuberculosis
Beta- Ketoacyl-Acyl Carrier Protein Synthase Iii
(Mtfabh)
Length = 355
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 230 IVKVSTNLQDIAEEVEKIQKAMGT----GIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 285
IV +T+ + ++G G D+S CAGF + A R GG ++
Sbjct: 107 IVTTNTHFLQTPPAAPMVAASLGAKGILGFDLSAGCAGFGYALGAAADMIRGGGAATMLV 166
Query: 286 MGHHEMT 292
+G +++
Sbjct: 167 VGTEKLS 173
>pdb|2AJ9|A Chain A, X-Ray Crystal Structure Of W42a,R161a Double Mutant Of
Mycobacterium Tuberculosis Beta-Ketoacyl-Acp Synthase
Iii
pdb|2AJ9|B Chain B, X-Ray Crystal Structure Of W42a,R161a Double Mutant Of
Mycobacterium Tuberculosis Beta-Ketoacyl-Acp Synthase
Iii
Length = 356
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 230 IVKVSTNLQDIAEEVEKIQKAMGT----GIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 285
IV +T+ + ++G G D+S CAGF + A R GG ++
Sbjct: 108 IVTTNTHFLQTPPAAPMVAASLGAKGILGFDLSAGCAGFGYALGAAADMIRGGGAATMLV 167
Query: 286 MGHHEMT 292
+G +++
Sbjct: 168 VGTEKLS 174
>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
pdb|2VN8|B Chain B, Crystal Structure Of Human Reticulon 4 Interacting Protein
1 In Complex With Nadph
Length = 375
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 74 PMVIGHECAGVIEKVGSEVKTLVPGDRV 101
P+ +G + +GV+ + G +VK PGD V
Sbjct: 95 PLTLGRDVSGVVMECGLDVKYFKPGDEV 122
>pdb|1HZP|A Chain A, Crystal Structure Of The Myobacterium Tuberculosis
Beta-Ketoacyl-Acyl Carrier Protein Synthase Iii
pdb|1HZP|B Chain B, Crystal Structure Of The Myobacterium Tuberculosis
Beta-Ketoacyl-Acyl Carrier Protein Synthase Iii
pdb|2QX1|A Chain A, Crystal Structure Of The Complex Between Mycobacterium
Tuberculosis Beta-Ketoacyl-Acyl Carrier Protein Synthase
Iii (Fabh) And Decyl-Coa Disulfide
pdb|2QX1|B Chain B, Crystal Structure Of The Complex Between Mycobacterium
Tuberculosis Beta-Ketoacyl-Acyl Carrier Protein Synthase
Iii (Fabh) And Decyl-Coa Disulfide
pdb|2QNX|A Chain A, Crystal Structure Of The Complex Between The Mycobacterium
Beta- Ketoacyl-acyl Carrier Protein Synthase Iii (fabh)
And 11- [(decyloxycarbonyl)dithio]-undecanoic Acid
pdb|2QNX|B Chain B, Crystal Structure Of The Complex Between The Mycobacterium
Beta- Ketoacyl-acyl Carrier Protein Synthase Iii (fabh)
And 11- [(decyloxycarbonyl)dithio]-undecanoic Acid
pdb|2QNZ|A Chain A, Crystal Structure Of The Complex Between The Mycobacterium
Beta-Ketoacyl-Acyl Carrier Protein Synthase Iii (Fabh)
And Ss-(2-Hydroxyethyl)-O-Decyl Ester
Carbono(Dithioperoxoic) Acid
pdb|2QNZ|B Chain B, Crystal Structure Of The Complex Between The Mycobacterium
Beta-Ketoacyl-Acyl Carrier Protein Synthase Iii (Fabh)
And Ss-(2-Hydroxyethyl)-O-Decyl Ester
Carbono(Dithioperoxoic) Acid
pdb|2QO1|A Chain A, 2.6 Angstrom Crystal Structure Of The Complex Between 11-
(Decyldithiocarbonyloxy)-Undecanoic Acid And
Mycobacterium Tuberculosis Fabh.
pdb|2QO1|B Chain B, 2.6 Angstrom Crystal Structure Of The Complex Between 11-
(Decyldithiocarbonyloxy)-Undecanoic Acid And
Mycobacterium Tuberculosis Fabh
Length = 335
Score = 28.1 bits (61), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Query: 230 IVKVSTNLQDIAEEVEKIQKAMGT----GIDVSFDCAGFNKTMSTALSATRAGGKVCLVG 285
IV +T+ + ++G G D+S CAGF + A R GG ++
Sbjct: 87 IVTTNTHFLQTPPAAPMVAASLGAKGILGFDLSAGCAGFGYALGAAADMIRGGGAATMLV 146
Query: 286 MGHHEMT 292
+G +++
Sbjct: 147 VGTEKLS 153
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,238,100
Number of Sequences: 62578
Number of extensions: 477377
Number of successful extensions: 1780
Number of sequences better than 100.0: 135
Number of HSP's better than 100.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1428
Number of HSP's gapped (non-prelim): 165
length of query: 364
length of database: 14,973,337
effective HSP length: 100
effective length of query: 264
effective length of database: 8,715,537
effective search space: 2300901768
effective search space used: 2300901768
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)